Your job contains 1 sequence.
>036464
MEVSKLPISATQRGKLISAGYTSLSSICSASSSDISRGTQTAWDMLQEEQESLARITTSC
ADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGGKAIYIGKCLGF
YTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFVDLALRTRVLSGIALKLMNLAKK
FSLALLEPNLATTANLAESCLTCLRDSGSRKAVAAAAAQLGFVLFG
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036464
(226 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-041010-204 - symbol:rad51c "rad51 homolog C... 222 1.2e-36 3
UNIPROTKB|F1S262 - symbol:RAD51C "Uncharacterized protein... 197 3.7e-35 3
UNIPROTKB|F1PMI7 - symbol:RAD51C "Uncharacterized protein... 199 6.8e-35 3
DICTYBASE|DDB_G0284507 - symbol:DDB_G0284507 "putative Ra... 182 7.3e-28 2
UNIPROTKB|Q8R2J9 - symbol:RAD51C "DNA repair protein RAD5... 209 1.0e-19 2
MGI|MGI:2150020 - symbol:Rad51c "RAD51 homolog C" species... 204 3.1e-19 2
RGD|1563765 - symbol:Rad51c "Rad51 homolog c (S. cerevisi... 204 2.1e-18 2
UNIPROTKB|J3QKK3 - symbol:RAD51C "DNA repair protein RAD5... 197 5.5e-18 2
UNIPROTKB|O43502 - symbol:RAD51C "DNA repair protein RAD5... 197 1.0e-17 2
UNIPROTKB|F1MW99 - symbol:RAD51C "Uncharacterized protein... 192 4.3e-17 2
UNIPROTKB|E1BRQ1 - symbol:RAD51C "Uncharacterized protein... 210 1.0e-16 1
UNIPROTKB|F1NUE9 - symbol:RAD51C "Uncharacterized protein... 210 1.1e-16 1
UNIPROTKB|F1M525 - symbol:Rad51c "Protein Rad51c" species... 204 3.1e-16 1
TAIR|locus:2174577 - symbol:XRCC3 "homolog of X-ray repai... 149 4.3e-16 2
DICTYBASE|DDB_G0283637 - symbol:xrcc3 "putative DNA repai... 164 5.3e-16 2
UNIPROTKB|H7C2Q5 - symbol:RAD51C "DNA repair protein RAD5... 197 9.8e-16 1
UNIPROTKB|E2R3P3 - symbol:RAD51B "Uncharacterized protein... 150 2.7e-15 2
UNIPROTKB|F1SA21 - symbol:RAD51B "Uncharacterized protein... 150 3.5e-15 2
UNIPROTKB|H7C1R0 - symbol:RAD51C "DNA repair protein RAD5... 174 2.7e-13 1
UNIPROTKB|E1BE93 - symbol:RAD51B "Uncharacterized protein... 146 3.4e-13 2
UNIPROTKB|Q08DH8 - symbol:XRCC3 "DNA repair protein XRCC3... 147 5.4e-13 2
UNIPROTKB|Q9P972 - symbol:LIM15/DMC1 homolog "LIM15/DMC1 ... 134 2.1e-12 2
MGI|MGI:1099436 - symbol:Rad51b "RAD51 homolog B" species... 145 5.2e-12 2
FB|FBgn0003482 - symbol:spn-D "spindle D" species:7227 "D... 138 6.7e-12 2
UNIPROTKB|O15315 - symbol:RAD51B "DNA repair protein RAD5... 142 8.6e-12 2
UNIPROTKB|C9JYJ0 - symbol:RAD51B "DNA repair protein RAD5... 142 1.3e-11 2
ZFIN|ZDB-GENE-050320-116 - symbol:xrcc3 "X-ray repair com... 146 1.3e-11 2
UNIPROTKB|F1S9W9 - symbol:XRCC3 "Uncharacterized protein"... 142 1.9e-11 2
UNIPROTKB|G5EGG8 - symbol:rad-51 "RecA/Rad51/Dmc1-like pr... 139 3.1e-11 2
WB|WBGene00004297 - symbol:rad-51 species:6239 "Caenorhab... 139 4.6e-11 2
UNIPROTKB|Q95Q25 - symbol:rad-51 "Protein RAD-51, isoform... 139 4.6e-11 2
RGD|1560681 - symbol:Rad51b "RAD51 homolog B (S. cerevisi... 142 1.2e-10 2
UNIPROTKB|Q7KZJ0 - symbol:RAD51C "cDNA FLJ76539, highly s... 120 1.6e-10 2
UNIPROTKB|E1BVI8 - symbol:RAD51B "Uncharacterized protein... 149 7.9e-10 1
FB|FBgn0003480 - symbol:spn-B "spindle B" species:7227 "D... 149 1.5e-09 1
UNIPROTKB|E2RAE7 - symbol:XRCC3 "Uncharacterized protein"... 131 2.5e-09 2
UNIPROTKB|J3QR58 - symbol:RAD51C "DNA repair protein RAD5... 136 2.9e-09 1
ASPGD|ASPL0000094064 - symbol:AN11929 species:162425 "Eme... 127 3.1e-09 2
ASPGD|ASPL0000098803 - symbol:AN11930 species:162425 "Eme... 127 3.1e-09 2
UNIPROTKB|Q5ARI8 - symbol:AN9092.2 "Meiotic recombination... 127 3.1e-09 2
UNIPROTKB|E9PNT5 - symbol:RAD51 "DNA repair protein RAD51... 135 3.6e-09 1
UNIPROTKB|Q5ZM26 - symbol:XRCC3 "Uncharacterized protein"... 147 4.3e-09 1
SGD|S000000981 - symbol:DMC1 "Meiosis-specific protein re... 122 9.9e-09 2
UNIPROTKB|G4MNW7 - symbol:MGG_06985 "Uncharacterized prot... 117 1.7e-08 2
UNIPROTKB|O43542 - symbol:XRCC3 "DNA repair protein XRCC3... 126 2.1e-08 2
MGI|MGI:1921585 - symbol:Xrcc3 "X-ray repair complementin... 143 2.6e-08 1
RGD|1306849 - symbol:Xrcc3 "X-ray repair complementing de... 142 3.7e-08 1
ZFIN|ZDB-GENE-060331-93 - symbol:dmc1 "DMC1 dosage suppre... 141 4.9e-08 1
TAIR|locus:2084558 - symbol:DMC1 "DISRUPTION OF MEIOTIC C... 140 7.5e-08 1
UNIPROTKB|G1K2Z8 - symbol:RAD51 "Uncharacterized protein"... 138 1.3e-07 1
UNIPROTKB|P37383 - symbol:RAD51A "DNA repair protein RAD5... 138 1.4e-07 1
POMBASE|SPAC8E11.03c - symbol:dmc1 "RecA family ATPase Dm... 117 1.9e-07 2
UNIPROTKB|Q6FKF0 - symbol:CAGL0L12100g "Similar to unipro... 117 2.0e-07 2
UNIPROTKB|A3E3X4 - symbol:rad51 "Rad51" species:4754 "Pne... 133 2.0e-07 2
UNIPROTKB|A3E3X6 - symbol:rad51 "Rad51" species:263815 "P... 133 2.0e-07 2
UNIPROTKB|Q74ZU7 - symbol:AGR101C "AGR101Cp" species:2848... 123 2.5e-07 2
UNIPROTKB|Q50LF7 - symbol:eDmc1 "RecA homolog DMC1" speci... 136 2.6e-07 1
SGD|S000002411 - symbol:RAD57 "Protein that stimulates st... 137 3.5e-07 1
UNIPROTKB|Q2KJ94 - symbol:RAD51 "DNA repair protein RAD51... 135 3.8e-07 1
UNIPROTKB|Q8MKI8 - symbol:RAD51 "DNA repair protein RAD51... 135 3.8e-07 1
UNIPROTKB|Q06609 - symbol:RAD51 "DNA repair protein RAD51... 135 3.8e-07 1
UNIPROTKB|B0M1M6 - symbol:pigRAD51 "Rad51" species:9823 "... 135 3.8e-07 1
UNIPROTKB|O77507 - symbol:RAD51 "DNA repair protein RAD51... 135 3.8e-07 1
UNIPROTKB|P70099 - symbol:RAD51 "DNA repair protein RAD51... 135 3.8e-07 1
MGI|MGI:97890 - symbol:Rad51 "RAD51 homolog" species:1009... 135 3.8e-07 1
TAIR|locus:2147092 - symbol:RAD51 species:3702 "Arabidops... 135 3.8e-07 1
ASPGD|ASPL0000057020 - symbol:uvsC species:162425 "Emeric... 135 4.0e-07 1
ASPGD|ASPL0000051939 - symbol:AN10145 species:162425 "Eme... 110 5.5e-07 2
UNIPROTKB|Q50LF6 - symbol:tilDmc1 "RecA homolog Dmc1" spe... 133 6.9e-07 1
SGD|S000000897 - symbol:RAD51 "Strand exchange protein" s... 133 9.4e-07 1
ZFIN|ZDB-GENE-040426-2286 - symbol:rad51 "RAD51 homolog (... 132 9.5e-07 1
UNIPROTKB|Q9DGC3 - symbol:Dmc1 "DMC1" species:8330 "Cynop... 132 9.6e-07 1
UNIPROTKB|Q4WAR2 - symbol:AFUA_7G02200 "Meiotic recombina... 131 1.3e-06 1
UNIPROTKB|F1NI95 - symbol:DMC1 "Uncharacterized protein" ... 131 1.3e-06 1
UNIPROTKB|G3V399 - symbol:XRCC3 "DNA repair protein XRCC3... 112 1.6e-06 1
UNIPROTKB|E2RK50 - symbol:DMC1 "Uncharacterized protein" ... 130 1.7e-06 1
UNIPROTKB|F1SKQ1 - symbol:DMC1 "Uncharacterized protein" ... 130 1.7e-06 1
UNIPROTKB|Q9C0P6 - symbol:dmc1 "Putative DMC1 protein" sp... 130 1.8e-06 1
CGD|CAL0001214 - symbol:RAD51 species:5476 "Candida albic... 130 1.9e-06 1
UNIPROTKB|Q59UY8 - symbol:RAD51 "Putative uncharacterized... 130 1.9e-06 1
UNIPROTKB|Q6BP40 - symbol:DEHA2E16742g "DEHA2E16742p" spe... 129 2.2e-06 1
UNIPROTKB|Q14565 - symbol:DMC1 "Meiotic recombination pro... 129 2.3e-06 1
MGI|MGI:105393 - symbol:Dmc1 "DMC1 dosage suppressor of m... 129 2.3e-06 1
FB|FBgn0003479 - symbol:spn-A "spindle A" species:7227 "D... 127 4.0e-06 1
RGD|1307611 - symbol:Dmc1 "DMC1 dosage suppressor of mck1... 127 4.1e-06 1
POMBASE|SPAC20H4.07 - symbol:rad57 "RecA family ATPase Ra... 124 1.1e-05 1
UNIPROTKB|F1N1D2 - symbol:DMC1 "Uncharacterized protein" ... 122 1.8e-05 1
UNIPROTKB|E2RP02 - symbol:RAD51D "Uncharacterized protein... 107 1.9e-05 2
UNIPROTKB|Q2HJ51 - symbol:RAD51D "DNA repair protein RAD5... 104 2.3e-05 2
GENEDB_PFALCIPARUM|MAL8P1.76 - symbol:MAL8P1.76 "meiotic ... 121 2.4e-05 1
UNIPROTKB|Q8IB05 - symbol:MAL8P1.76 "Meiotic recombinatio... 121 2.4e-05 1
UNIPROTKB|O75771 - symbol:RAD51D "DNA repair protein RAD5... 107 3.1e-05 2
POMBASE|SPAC644.14c - symbol:rad51 "RecA family recombina... 120 3.6e-05 1
UNIPROTKB|B6JXU7 - symbol:SJAG_01410 "DNA repair protein ... 120 3.7e-05 1
ZFIN|ZDB-GENE-040426-2750 - symbol:rad51b "RAD51 homolog ... 120 3.8e-05 1
UNIPROTKB|E1BVK2 - symbol:RAD51D "Uncharacterized protein... 107 4.9e-05 2
UNIPROTKB|Q0MR21 - symbol:Q0MR21 "DMC1-like protein" spec... 117 7.2e-05 1
UNIPROTKB|K7EN92 - symbol:RAD51D "DNA repair protein RAD5... 107 8.5e-05 2
DICTYBASE|DDB_G0273611 - symbol:rad51-2 "putative DNA rep... 116 0.00010 1
DICTYBASE|DDB_G0273139 - symbol:rad51-1 "putative DNA rep... 116 0.00010 1
WARNING: Descriptions of 8 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-041010-204 [details] [associations]
symbol:rad51c "rad51 homolog C (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 ZFIN:ZDB-GENE-041010-204 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5889 HOVERGEN:HBG055764 KO:K10870
OrthoDB:EOG4CRM09 EMBL:BC083214 IPI:IPI00498753
RefSeq:NP_001006101.1 UniGene:Dr.83418 ProteinModelPortal:Q5XJT2
STRING:Q5XJT2 GeneID:450081 KEGG:dre:450081 InParanoid:Q5XJT2
NextBio:20833059 ArrayExpress:Q5XJT2 Uniprot:Q5XJT2
Length = 362
Score = 222 (83.2 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 45/74 (60%), Positives = 57/74 (77%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
TA D+L +EQ +L I T C+ LD+ +GGG+ + TEI G PG+GKTQL +QLAV+VQI
Sbjct: 72 TALDLLHQEQ-TLGSIVTFCSGLDDAIGGGVPVGKTTEICGAPGVGKTQLCMQLAVDVQI 130
Query: 101 PVEFGGLGGKAIYI 114
PV FGGLGGKA+YI
Sbjct: 131 PVFFGGLGGKALYI 144
Score = 165 (63.1 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 35/82 (42%), Positives = 56/82 (68%)
Query: 112 IYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFVDLALRTRVLSGIA 171
+++ +C Y + A + L F+SEH +V++V+IDSIAF FRH F DL+ RTR+L+G+A
Sbjct: 191 LFLVRCHD-YVKLLAEVYLLPDFLSEHPEVRLVVIDSIAFPFRHDFEDLSQRTRLLNGLA 249
Query: 172 LKLMNLAKKFSLALLEPNLATT 193
+L+ LA + +A++ N TT
Sbjct: 250 QQLIQLATQHRVAVVLTNQMTT 271
Score = 41 (19.5 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 3 VSKLPISATQRGKLISAGY 21
V LP++ + + KLI+AG+
Sbjct: 5 VPSLPLAPSVKVKLINAGF 23
>UNIPROTKB|F1S262 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004504 InterPro:IPR020588 PRINTS:PR01874
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003684
GO:GO:0006281 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
OMA:QRDLVSF EMBL:FP102481 Ensembl:ENSSSCT00000019210 Uniprot:F1S262
Length = 321
Score = 197 (74.4 bits), Expect = 3.7e-35, Sum P(3) = 3.7e-35
Identities = 40/74 (54%), Positives = 56/74 (75%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
TA ++L++E + I T C+ LDNILGGG+ ++TEI G PG+GKTQL +QLAV+VQI
Sbjct: 77 TALELLEQEHTQ-SFIITFCSALDNILGGGVPLTKITEICGAPGVGKTQLCMQLAVDVQI 135
Query: 101 PVEFGGLGGKAIYI 114
P FGG+ G+A++I
Sbjct: 136 PECFGGVEGEAVFI 149
Score = 173 (66.0 bits), Expect = 3.7e-35, Sum P(3) = 3.7e-35
Identities = 38/82 (46%), Positives = 54/82 (65%)
Query: 112 IYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFVDLALRTRVLSGIA 171
IY +C YTE A + L F+SEH V++VI+D IAF FRH DL+LRTR+L+G+A
Sbjct: 199 IYYFRCRD-YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHELDDLSLRTRLLNGLA 257
Query: 172 LKLMNLAKKFSLALLEPNLATT 193
++++LA LA++ N TT
Sbjct: 258 QQMISLANNHRLAVILTNQMTT 279
Score = 42 (19.8 bits), Expect = 3.7e-35, Sum P(3) = 3.7e-35
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 2 EVSKLPISATQRGKLISAGY 21
++ P+S R KL+SAG+
Sbjct: 4 DLLSFPLSPAVRVKLVSAGF 23
>UNIPROTKB|F1PMI7 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0008821 "crossover junction endodeoxyribonuclease
activity" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0003677 GO:GO:0006281 GO:GO:0007283 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066
GeneTree:ENSGT00550000074609 OMA:QRDLVSF EMBL:AAEX03006577
EMBL:AAEX03006578 EMBL:AAEX03006579 Ensembl:ENSCAFT00000027833
Uniprot:F1PMI7
Length = 368
Score = 199 (75.1 bits), Expect = 6.8e-35, Sum P(3) = 6.8e-35
Identities = 42/74 (56%), Positives = 56/74 (75%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
TA ++L++E + I T C+ LDNILGGGI + TEI GVPG+GKTQL +QLAV+VQI
Sbjct: 79 TALELLEQEHTQ-SFIITFCSALDNILGGGIPLTKTTEICGVPGVGKTQLCMQLAVDVQI 137
Query: 101 PVEFGGLGGKAIYI 114
P FGG+ G+A++I
Sbjct: 138 PECFGGVEGEAVFI 151
Score = 176 (67.0 bits), Expect = 6.8e-35, Sum P(3) = 6.8e-35
Identities = 39/82 (47%), Positives = 54/82 (65%)
Query: 112 IYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFVDLALRTRVLSGIA 171
IY +C YTE A + L F+SEH V++VI+D IAF FRH DL+LRTR+L+G+A
Sbjct: 201 IYYFRCRD-YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLDDLSLRTRLLNGLA 259
Query: 172 LKLMNLAKKFSLALLEPNLATT 193
++++LA LA+L N TT
Sbjct: 260 QQMISLANNHRLAVLLTNQMTT 281
Score = 42 (19.8 bits), Expect = 6.8e-35, Sum P(3) = 6.8e-35
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 2 EVSKLPISATQRGKLISAGY 21
++ P+S R KL+SAG+
Sbjct: 6 DLVSFPLSPAVRVKLVSAGF 25
>DICTYBASE|DDB_G0284507 [details] [associations]
symbol:DDB_G0284507 "putative Rad51C protein"
species:44689 "Dictyostelium discoideum" [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
dictyBase:DDB_G0284507 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000153_GR GO:GO:0003677 GO:GO:0006281 GO:GO:0006310
EMBL:AAFI02000066 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
RefSeq:XP_638535.1 HSSP:Q55075 ProteinModelPortal:Q54PJ7
EnsemblProtists:DDB0232315 GeneID:8624628 KEGG:ddi:DDB_G0284507
InParanoid:Q54PJ7 KO:K10870 OMA:VREMATH Uniprot:Q54PJ7
Length = 381
Score = 182 (69.1 bits), Expect = 7.3e-28, Sum P(2) = 7.3e-28
Identities = 35/74 (47%), Positives = 50/74 (67%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
+A D+L + ++ I T C+++D +L GG +++TEI GVPGIGKT + QL VN I
Sbjct: 49 SALDLLIQGRDGNNNIITFCSEIDQMLNGGTPLKKITEICGVPGIGKTNMAFQLLVNTSI 108
Query: 101 PVEFGGLGGKAIYI 114
P + GG+ GKAIYI
Sbjct: 109 PFDLGGVQGKAIYI 122
Score = 156 (60.0 bits), Expect = 7.3e-28, Sum P(2) = 7.3e-28
Identities = 35/84 (41%), Positives = 54/84 (64%)
Query: 121 YTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFVDLALRTRVLSGIALKLMNLAKK 180
Y E ++I+ L F+ ++KDVK++++DSI + FR F D+ LRTR L +A LMN+A +
Sbjct: 177 YIEIISLIHQLPLFLEKNKDVKLIVVDSITYPFRCDFKDMGLRTRSLLSLAQNLMNIATR 236
Query: 181 FSLALLEPNLATTA---NLAESCL 201
++LA++ N TT N ES L
Sbjct: 237 YNLAVVVMNQVTTKISPNQKESIL 260
>UNIPROTKB|Q8R2J9 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:10029 "Cricetulus griseus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISS]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0003677 GO:GO:0006281
GO:GO:0006310 GO:GO:0008094 GO:GO:0007062 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 EMBL:AJ413202
EMBL:AJ428572 RefSeq:NP_001231005.1 HSSP:O74036
ProteinModelPortal:Q8R2J9 GeneID:100689078 CTD:5889
HOVERGEN:HBG055764 Uniprot:Q8R2J9
Length = 366
Score = 209 (78.6 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 48/105 (45%), Positives = 66/105 (62%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
TA ++L++E I T C+ LDNILGGGI + TE+ GVPG+GKTQL +QLAV+VQI
Sbjct: 77 TALELLEQEHTQ-GFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQI 135
Query: 101 PVEFGGLGGKAIYIGKCLGFYTEQ-----SAVINYLDKFVSEHKD 140
P FGG+ G+A++I F ++ +A I +L HKD
Sbjct: 136 PECFGGVAGEAVFIDTEGSFMVDRVVTLANACIQHLHLIAGTHKD 180
Score = 162 (62.1 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 112 IYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFVDLALRTRVLSGIA 171
IY +C YTE A + L F+S H V++VIID IA FRH DL+LRTR+L+G+A
Sbjct: 199 IYYFRCHD-YTELLAQVYLLPDFLSNHSKVQLVIIDGIALPFRHDLDDLSLRTRLLNGLA 257
Query: 172 LKLMNLAKKFSLALLEPNLATT 193
++++LA LA++ N TT
Sbjct: 258 QQMISLANNHRLAVILTNQMTT 279
Score = 47 (21.6 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 2 EVSKLPISATQRGKLISAGY 21
E+ P+S T R KL++AG+
Sbjct: 4 ELVSFPLSPTVRVKLVAAGF 23
>MGI|MGI:2150020 [details] [associations]
symbol:Rad51c "RAD51 homolog C" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007066 "female meiosis sister chromatid cohesion"
evidence=IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008821
"crossover junction endodeoxyribonuclease activity" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048476 "Holliday junction resolvase complex" evidence=IC]
InterPro:IPR020588 PROSITE:PS50162 MGI:MGI:2150020 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0007283 EMBL:CH466556 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0008094 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066 GO:GO:0048476
EMBL:AL596130 GeneTree:ENSGT00550000074609 HSSP:O74036 CTD:5889
HOVERGEN:HBG055764 KO:K10870 OMA:QRDLVSF OrthoDB:EOG4CRM09
EMBL:AF324883 EMBL:AK076551 EMBL:CU406989 EMBL:CU406969
EMBL:AL669902 EMBL:BC090648 EMBL:BC141034 IPI:IPI00125672
IPI:IPI00226086 RefSeq:NP_444499.1 UniGene:Mm.37376
ProteinModelPortal:Q924H5 SMR:Q924H5 STRING:Q924H5 PRIDE:Q924H5
Ensembl:ENSMUST00000007790 Ensembl:ENSMUST00000067692 GeneID:114714
KEGG:mmu:114714 UCSC:uc007ktp.2 InParanoid:Q5SX32 NextBio:368733
Bgee:Q924H5 Genevestigator:Q924H5 Uniprot:Q924H5
Length = 366
Score = 204 (76.9 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 55/142 (38%), Positives = 81/142 (57%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
TA ++L++E I T C+ LDNILGGGI + TE+ GVPG+GKTQL +QLAV+VQI
Sbjct: 77 TALELLEQEHTQ-GFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQI 135
Query: 101 PVEFGGLGGKAIYIGKCLGFYTEQ-----SAVINYLDKFVSEH------KDVKVVIIDSI 149
P FGG+ G+A++I F ++ +A I +L H K +K +++I
Sbjct: 136 PECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEHQKALKDFTLENI 195
Query: 150 AFH---FR-HGFVDLALRTRVL 167
H FR H + +L + +L
Sbjct: 196 LSHIYYFRCHDYTELLAQVYLL 217
Score = 170 (64.9 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 38/82 (46%), Positives = 54/82 (65%)
Query: 112 IYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFVDLALRTRVLSGIA 171
IY +C YTE A + L F+S+H V++VIID IAF FRH DL+LRTR+L+G+A
Sbjct: 199 IYYFRCHD-YTELLAQVYLLPDFLSDHPKVQLVIIDGIAFPFRHDLEDLSLRTRLLNGLA 257
Query: 172 LKLMNLAKKFSLALLEPNLATT 193
++++LA LA++ N TT
Sbjct: 258 QQMISLANNHRLAVILTNQMTT 279
Score = 48 (22.0 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 2 EVSKLPISATQRGKLISAGY 21
E+ P+S RGKL++AG+
Sbjct: 4 ELVGYPLSPAVRGKLVAAGF 23
>RGD|1563765 [details] [associations]
symbol:Rad51c "Rad51 homolog c (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0006281 "DNA repair"
evidence=IEA;ISO] [GO:0006310 "DNA recombination" evidence=ISO]
[GO:0007066 "female meiosis sister chromatid cohesion"
evidence=IEA;ISO] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA;ISO] [GO:0007141 "male meiosis I" evidence=IEA;ISO]
[GO:0007283 "spermatogenesis" evidence=IEA;ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008821
"crossover junction endodeoxyribonuclease activity"
evidence=IEA;ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA;ISO] InterPro:IPR020588 PROSITE:PS50162 RGD:1563765
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 EMBL:CH473948
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 CTD:5889 KO:K10870
OMA:QRDLVSF RefSeq:NP_001123249.1 UniGene:Rn.160309
Ensembl:ENSRNOT00000008846 GeneID:497976 KEGG:rno:497976
NextBio:698267 Uniprot:G3V6U0
Length = 366
Score = 204 (76.9 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 55/142 (38%), Positives = 81/142 (57%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
TA ++L++E I T C+ LDNILGGGI + TE+ GVPG+GKTQL +QLAV+VQI
Sbjct: 77 TALELLEQEHTQ-GFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQI 135
Query: 101 PVEFGGLGGKAIYIGKCLGFYTEQ-----SAVINYLDKFVSEH------KDVKVVIIDSI 149
P FGG+ G+A++I F ++ +A I +L H K +K +++I
Sbjct: 136 PECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEQQKALKDFTLENI 195
Query: 150 AFH---FR-HGFVDLALRTRVL 167
H FR H + +L + +L
Sbjct: 196 LSHIYYFRCHDYTELLAQVYLL 217
Score = 174 (66.3 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 40/82 (48%), Positives = 54/82 (65%)
Query: 112 IYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFVDLALRTRVLSGIA 171
IY +C YTE A + L F+S+H V++VIID IAF FRH DL LRTR+L+G+A
Sbjct: 199 IYYFRCHD-YTELLAQVYLLPDFLSDHSKVQLVIIDGIAFPFRHDLDDLFLRTRLLNGLA 257
Query: 172 LKLMNLAKKFSLALLEPNLATT 193
+L++LA K LA++ N TT
Sbjct: 258 QQLISLANKHRLAVILTNQMTT 279
Score = 40 (19.1 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 2 EVSKLPISATQRGKLISAGY 21
E+ P+S R KL++AG+
Sbjct: 4 ELVGFPLSPAVRVKLVAAGF 23
>UNIPROTKB|J3QKK3 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 EMBL:AC025521 EMBL:AC011195
HGNC:HGNC:9820 ProteinModelPortal:J3QKK3 Ensembl:ENST00000583539
Uniprot:J3QKK3
Length = 346
Score = 197 (74.4 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 45/104 (43%), Positives = 65/104 (62%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
TA ++L++E I T C+ LD+ILGGG+ + TEI G PG+GKTQL +QLAV+VQI
Sbjct: 86 TALELLEQEHTQ-GFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQI 144
Query: 101 PVEFGGLGGKAIYIGKCLGFYTEQ-----SAVINYLDKFVSEHK 139
P FGG+ G+A++I F ++ +A I +L +HK
Sbjct: 145 PECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHK 188
Score = 174 (66.3 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 38/82 (46%), Positives = 54/82 (65%)
Query: 112 IYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFVDLALRTRVLSGIA 171
IY +C YTE A + L F+SEH V++VI+D IAF FRH DL+LRTR+L+G+A
Sbjct: 208 IYYFRCRD-YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLDDLSLRTRLLNGLA 266
Query: 172 LKLMNLAKKFSLALLEPNLATT 193
++++LA LA++ N TT
Sbjct: 267 QQMISLANNHRLAVILTNQMTT 288
Score = 42 (19.8 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 2 EVSKLPISATQRGKLISAGY 21
++ P+S R KL+SAG+
Sbjct: 13 DLVSFPLSPAVRVKLVSAGF 32
>UNIPROTKB|O43502 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IDA] [GO:0006310
"DNA recombination" evidence=IDA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007062 "sister chromatid
cohesion" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007596 "blood
coagulation" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_604 InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005739
GO:GO:0005524 GO:GO:0048471 GO:GO:0005654 GO:GO:0003677
GO:GO:0007596 GO:GO:0006281 GO:GO:0007283 GO:GO:0006310
EMBL:CH471109 GO:GO:0007131 Orphanet:145 Orphanet:84 GO:GO:0007141
GO:GO:0008821 GO:GO:0008094 GO:GO:0007062 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066 EMBL:AC025521 CTD:5889
HOVERGEN:HBG055764 KO:K10870 EMBL:AF029669 EMBL:AF029670
EMBL:AY623112 EMBL:AC011195 EMBL:BC107753 IPI:IPI00012829
IPI:IPI00040453 RefSeq:NP_002867.1 RefSeq:NP_478123.1
UniGene:Hs.412587 ProteinModelPortal:O43502 SMR:O43502
IntAct:O43502 MINT:MINT-204767 STRING:O43502 PhosphoSite:O43502
PRIDE:O43502 DNASU:5889 Ensembl:ENST00000337432
Ensembl:ENST00000421782 GeneID:5889 KEGG:hsa:5889 UCSC:uc002iwu.3
GeneCards:GC17P056769 HGNC:HGNC:9820 MIM:602774 MIM:613390
MIM:613399 neXtProt:NX_O43502 PharmGKB:PA34177 InParanoid:O43502
OMA:QRDLVSF OrthoDB:EOG4CRM09 PhylomeDB:O43502 GenomeRNAi:5889
NextBio:22902 ArrayExpress:O43502 Bgee:O43502 CleanEx:HS_RAD51C
Genevestigator:O43502 GermOnline:ENSG00000108384 Uniprot:O43502
Length = 376
Score = 197 (74.4 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 45/104 (43%), Positives = 65/104 (62%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
TA ++L++E I T C+ LD+ILGGG+ + TEI G PG+GKTQL +QLAV+VQI
Sbjct: 86 TALELLEQEHTQ-GFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQI 144
Query: 101 PVEFGGLGGKAIYIGKCLGFYTEQ-----SAVINYLDKFVSEHK 139
P FGG+ G+A++I F ++ +A I +L +HK
Sbjct: 145 PECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHK 188
Score = 174 (66.3 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 38/82 (46%), Positives = 54/82 (65%)
Query: 112 IYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFVDLALRTRVLSGIA 171
IY +C YTE A + L F+SEH V++VI+D IAF FRH DL+LRTR+L+G+A
Sbjct: 208 IYYFRCRD-YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLDDLSLRTRLLNGLA 266
Query: 172 LKLMNLAKKFSLALLEPNLATT 193
++++LA LA++ N TT
Sbjct: 267 QQMISLANNHRLAVILTNQMTT 288
Score = 42 (19.8 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 2 EVSKLPISATQRGKLISAGY 21
++ P+S R KL+SAG+
Sbjct: 13 DLVSFPLSPAVRVKLVSAGF 32
>UNIPROTKB|F1MW99 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0003677 GO:GO:0006281 GO:GO:0007283 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066
GeneTree:ENSGT00550000074609 OMA:QRDLVSF EMBL:DAAA02048323
IPI:IPI00713775 Ensembl:ENSBTAT00000020012 Uniprot:F1MW99
Length = 382
Score = 192 (72.6 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 45/105 (42%), Positives = 64/105 (60%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
TA ++L++E I T C+ LDNILGGGI + TEI G PG+GKTQL +QLA++VQI
Sbjct: 87 TALELLEQEHTQNF-IITFCSALDNILGGGIPLTKTTEICGAPGVGKTQLCMQLAIDVQI 145
Query: 101 PVEFGGLGGKAIYIGKCLGFYTEQ-----SAVINYLDKFVSEHKD 140
P FGG+ G+A++I F ++ +A I +L H +
Sbjct: 146 PECFGGVEGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAGTHME 190
Score = 175 (66.7 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 38/82 (46%), Positives = 54/82 (65%)
Query: 112 IYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFVDLALRTRVLSGIA 171
IY +C YTE A + L F+SEH V++VI+D IAF FRH DL+LRTR+L+G+A
Sbjct: 209 IYYFRCRD-YTELLAQVYLLSDFLSEHSKVRLVIVDGIAFPFRHDLDDLSLRTRLLNGLA 267
Query: 172 LKLMNLAKKFSLALLEPNLATT 193
++++LA LA++ N TT
Sbjct: 268 QQMISLANNHRLAVILTNQMTT 289
Score = 42 (19.8 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 2 EVSKLPISATQRGKLISAGY 21
++ LP+S R KL SAG+
Sbjct: 14 DLVSLPLSPAVRVKLASAGF 33
>UNIPROTKB|E1BRQ1 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
GeneTree:ENSGT00550000074609 EMBL:AADN02025794 IPI:IPI00602048
ProteinModelPortal:E1BRQ1 Ensembl:ENSGALT00000008107 Uniprot:E1BRQ1
Length = 369
Score = 210 (79.0 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 45/88 (51%), Positives = 62/88 (70%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
TA ++L+EEQ I T C+ LDNILGGG+ ++TEI G PG+GKTQL +QLAV+VQI
Sbjct: 77 TALELLEEEQTQ-GFIITFCSALDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQI 135
Query: 101 PVEFGGLGGKAIYIGKCLGFYTEQSAVI 128
P FGG+ G+A++I F +++A I
Sbjct: 136 PECFGGVAGEAVFIDTEGSFMVDRAADI 163
Score = 156 (60.0 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 37/84 (44%), Positives = 53/84 (63%)
Query: 112 IYIGKCLGFYTEQSAVINYLDKFVSEHK--DVKVVIIDSIAFHFRHGFVDLALRTRVLSG 169
IY +C Y E A + L F+SEH +V++V+ID IAF FRH F DL+LRTR+L+G
Sbjct: 199 IYYFRCRD-YIELLAQVYLLPDFLSEHSKIEVRLVVIDGIAFPFRHDFEDLSLRTRLLNG 257
Query: 170 IALKLMNLAKKFSLALLEPNLATT 193
+A +L+ +A A++ N TT
Sbjct: 258 LAQQLIIIANDHKSAVVLTNQMTT 281
Score = 50 (22.7 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 18/79 (22%), Positives = 31/79 (39%)
Query: 2 EVSKLPISATQRGKLISAGYTXXXXXXXXXXXXXXRGTQTAWDMLQEEQESLARITTSCA 61
+V LP+S R +L++AG+ + + +E E+L + CA
Sbjct: 4 DVGSLPLSPALRARLLAAGFQTAQELLETGPCGLSKEIGIS---REEALEALQVVRQECA 60
Query: 62 -DLDNILGGGIGCREVTEI 79
D GG R+ T +
Sbjct: 61 GDAAKTAGGSGSTRKCTAL 79
>UNIPROTKB|F1NUE9 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007066 "female meiosis sister chromatid
cohesion" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0007131 GO:GO:0007141 GO:GO:0008821
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0007066 GeneTree:ENSGT00550000074609
OMA:QRDLVSF EMBL:AADN02025794 IPI:IPI00820436
Ensembl:ENSGALT00000039328 Uniprot:F1NUE9
Length = 373
Score = 210 (79.0 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 45/88 (51%), Positives = 62/88 (70%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
TA ++L+EEQ I T C+ LDNILGGG+ ++TEI G PG+GKTQL +QLAV+VQI
Sbjct: 82 TALELLEEEQTQ-GFIITFCSALDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQI 140
Query: 101 PVEFGGLGGKAIYIGKCLGFYTEQSAVI 128
P FGG+ G+A++I F +++A I
Sbjct: 141 PECFGGVAGEAVFIDTEGSFMVDRAADI 168
Score = 156 (60.0 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 37/84 (44%), Positives = 53/84 (63%)
Query: 112 IYIGKCLGFYTEQSAVINYLDKFVSEHK--DVKVVIIDSIAFHFRHGFVDLALRTRVLSG 169
IY +C Y E A + L F+SEH +V++V+ID IAF FRH F DL+LRTR+L+G
Sbjct: 204 IYYFRCRD-YIELLAQVYLLPDFLSEHSKIEVRLVVIDGIAFPFRHDFEDLSLRTRLLNG 262
Query: 170 IALKLMNLAKKFSLALLEPNLATT 193
+A +L+ +A A++ N TT
Sbjct: 263 LAQQLIIIANDHKSAVVLTNQMTT 286
Score = 50 (22.7 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 18/79 (22%), Positives = 31/79 (39%)
Query: 2 EVSKLPISATQRGKLISAGYTXXXXXXXXXXXXXXRGTQTAWDMLQEEQESLARITTSCA 61
+V LP+S R +L++AG+ + + +E E+L + CA
Sbjct: 9 DVGSLPLSPALRARLLAAGFQTAQELLETGPCGLSKEIGIS---REEALEALQVVRQECA 65
Query: 62 -DLDNILGGGIGCREVTEI 79
D GG R+ T +
Sbjct: 66 GDAAKTAGGSGSTRKCTAL 84
>UNIPROTKB|F1M525 [details] [associations]
symbol:Rad51c "Protein Rad51c" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1563765
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 IPI:IPI00951574 Ensembl:ENSRNOT00000065976
ArrayExpress:F1M525 Uniprot:F1M525
Length = 336
Score = 204 (76.9 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 55/142 (38%), Positives = 81/142 (57%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
TA ++L++E I T C+ LDNILGGGI + TE+ GVPG+GKTQL +QLAV+VQI
Sbjct: 47 TALELLEQEHTQ-GFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQI 105
Query: 101 PVEFGGLGGKAIYIGKCLGFYTEQ-----SAVINYLDKFVSEH------KDVKVVIIDSI 149
P FGG+ G+A++I F ++ +A I +L H K +K +++I
Sbjct: 106 PECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEQQKALKDFTLENI 165
Query: 150 AFH---FR-HGFVDLALRTRVL 167
H FR H + +L + +L
Sbjct: 166 LSHIYYFRCHDYTELLAQVYLL 187
Score = 174 (66.3 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 40/82 (48%), Positives = 54/82 (65%)
Query: 112 IYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFVDLALRTRVLSGIA 171
IY +C YTE A + L F+S+H V++VIID IAF FRH DL LRTR+L+G+A
Sbjct: 169 IYYFRCHD-YTELLAQVYLLPDFLSDHSKVQLVIIDGIAFPFRHDLDDLFLRTRLLNGLA 227
Query: 172 LKLMNLAKKFSLALLEPNLATT 193
+L++LA K LA++ N TT
Sbjct: 228 QQLISLANKHRLAVILTNQMTT 249
>TAIR|locus:2174577 [details] [associations]
symbol:XRCC3 "homolog of X-ray repair cross complementing
3" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006281 "DNA repair" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006302 "double-strand break repair"
evidence=RCA;IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007129 "synapsis" evidence=RCA] [GO:0007131 "reciprocal
meiotic recombination" evidence=RCA] [GO:0010212 "response to
ionizing radiation" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0045003 "double-strand break repair via synthesis-dependent
strand annealing" evidence=IDA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003697 GO:GO:0045003 EMBL:AB011482
GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 EMBL:AB062455 EMBL:AB073492
EMBL:AJ438908 EMBL:AJ438909 EMBL:AY032998 IPI:IPI00533166
RefSeq:NP_200554.1 RefSeq:NP_851202.1 UniGene:At.26227
UniGene:At.67214 ProteinModelPortal:Q9FKM5 SMR:Q9FKM5 STRING:Q9FKM5
EnsemblPlants:AT5G57450.1 EnsemblPlants:AT5G57450.2 GeneID:835850
KEGG:ath:AT5G57450 GeneFarm:4801 TAIR:At5g57450
HOGENOM:HOG000239162 InParanoid:Q9FKM5 KO:K10880 OMA:YSPETPN
PhylomeDB:Q9FKM5 ProtClustDB:CLSN2687414 Genevestigator:Q9FKM5
GermOnline:AT5G57450 Uniprot:Q9FKM5
Length = 304
Score = 149 (57.5 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 55 RITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGGKAIYI 114
++TT C LD L GGI C +TEI G GKTQL +QL++ Q+P+ GGL G ++Y+
Sbjct: 20 KLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPISHGGLNGSSLYL 79
Score = 83 (34.3 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 131 LDKFVSEHKD---VKVVIIDSIAFHFRHGF----VDLALRTRVLSGIALKLMNLAKKFSL 183
+D FV K +K++++DS+A FR F DL R+ + I+ KL LA KF L
Sbjct: 134 IDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQLASKFDL 193
Query: 184 ALLEPNLAT 192
A++ N T
Sbjct: 194 AIVITNQVT 202
>DICTYBASE|DDB_G0283637 [details] [associations]
symbol:xrcc3 "putative DNA repair protein XRCC3"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
dictyBase:DDB_G0283637 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0003677
GO:GO:0006310 GO:GO:0006302 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 Pfam:PF08423 RefSeq:XP_638929.1
ProteinModelPortal:Q54QU4 EnsemblProtists:DDB0232275 GeneID:8624168
KEGG:ddi:DDB_G0283637 InParanoid:Q54QU4 Uniprot:Q54QU4
Length = 564
Score = 164 (62.8 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 34/69 (49%), Positives = 45/69 (65%)
Query: 46 LQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFG 105
L++ Q S +++T C +D LGGGI +TEI G G GKTQL IQL++ VQ+P E G
Sbjct: 157 LEKLQISSIKLSTGCKIMDKCLGGGISPIGITEIAGESGSGKTQLCIQLSLQVQLPFEMG 216
Query: 106 GLGGKAIYI 114
GL G +YI
Sbjct: 217 GLNGACLYI 225
Score = 68 (29.0 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 18/70 (25%), Positives = 41/70 (58%)
Query: 127 VINYLDKFVSEHKDVKVVIIDSIAFHFRHGF----VDLALRTRVLSGIALKLMNLAKKFS 182
+IN + ++ E K ++++IIDSIA RH + ++ +T++L +A +L + +++
Sbjct: 299 LINQITGYL-EKKTIRLLIIDSIAALLRHEYGNEKSEIIEKTKLLWSLANRLKLINEQYG 357
Query: 183 LALLEPNLAT 192
+ ++ N T
Sbjct: 358 ITIVVVNQVT 367
>UNIPROTKB|H7C2Q5 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 EMBL:AC025521 EMBL:AC011195 HGNC:HGNC:9820
ProteinModelPortal:H7C2Q5 Ensembl:ENST00000425173 Bgee:H7C2Q5
Uniprot:H7C2Q5
Length = 213
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 45/104 (43%), Positives = 65/104 (62%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
TA ++L++E I T C+ LD+ILGGG+ + TEI G PG+GKTQL +QLAV+VQI
Sbjct: 18 TALELLEQEHTQ-GFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQI 76
Query: 101 PVEFGGLGGKAIYIGKCLGFYTEQ-----SAVINYLDKFVSEHK 139
P FGG+ G+A++I F ++ +A I +L +HK
Sbjct: 77 PECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHK 120
>UNIPROTKB|E2R3P3 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
OMA:CIMMSVL GeneTree:ENSGT00550000074609 EMBL:AAEX03005799
Ensembl:ENSCAFT00000026122 Uniprot:E2R3P3
Length = 272
Score = 150 (57.9 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 34/87 (39%), Positives = 47/87 (54%)
Query: 40 QTAWDMLQEEQESL--ARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
QTA+ + E SL A + T+ + LD L GG+ C +TEI G PG GKTQ I +++
Sbjct: 65 QTAYRIKMETSASLLPAFLATTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSIL 124
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQ 124
+P GGL G +YI F E+
Sbjct: 125 ATLPTNMGGLEGDVVYIDTESAFSAER 151
Score = 62 (26.9 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 27/73 (36%), Positives = 37/73 (50%)
Query: 121 YTEQS--AVINYLDKFVSE--HKDVKVVIIDSIAFHFRHGFVDLAL------RTRVLSGI 170
Y E S AV+ ++ E K VK+VIIDS+A R F D L R + L+
Sbjct: 180 YRELSCDAVLQRIESLEEEIISKGVKLVIIDSVASVVRKEF-DTQLQGNMRERNKFLARE 238
Query: 171 ALKLMNLAKKFSL 183
A L LA++FS+
Sbjct: 239 AASLKYLAEEFSI 251
>UNIPROTKB|F1SA21 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
OMA:CIMMSVL GeneTree:ENSGT00550000074609 EMBL:CT797462
Ensembl:ENSSSCT00000002560 Uniprot:F1SA21
Length = 252
Score = 150 (57.9 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 32/87 (36%), Positives = 50/87 (57%)
Query: 40 QTAWDMLQEEQE--SLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
QTA+++ + S A ++T+ + LD L GG+ C +TEI G PG GKTQ I +++
Sbjct: 65 QTAYEIKTQRSAVPSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSIL 124
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQ 124
+P++ GGL G +YI F E+
Sbjct: 125 ATLPIDMGGLEGAVVYIDTESAFSAER 151
Score = 58 (25.5 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 26/73 (35%), Positives = 36/73 (49%)
Query: 121 YTEQSA--VINYLDKFVSE--HKDVKVVIIDSIAFHFRHGFVDLAL------RTRVLSGI 170
Y E S V+ ++ E K VK+VIIDS+A R F D L R + L+
Sbjct: 180 YRELSCDEVLQRIESLEEEIISKGVKLVIIDSVASVVRKEF-DTQLQGNMRERNKFLARE 238
Query: 171 ALKLMNLAKKFSL 183
A L LA++FS+
Sbjct: 239 AASLKYLAEEFSI 251
>UNIPROTKB|H7C1R0 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 EMBL:AC025521 EMBL:AC011195 HGNC:HGNC:9820
ProteinModelPortal:H7C1R0 Ensembl:ENST00000413590 Uniprot:H7C1R0
Length = 257
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 38/82 (46%), Positives = 54/82 (65%)
Query: 112 IYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFVDLALRTRVLSGIA 171
IY +C YTE A + L F+SEH V++VI+D IAF FRH DL+LRTR+L+G+A
Sbjct: 88 IYYFRCRD-YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLDDLSLRTRLLNGLA 146
Query: 172 LKLMNLAKKFSLALLEPNLATT 193
++++LA LA++ N TT
Sbjct: 147 QQMISLANNHRLAVILTNQMTT 168
Score = 130 (50.8 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 78 EIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGGKAIYIGKCLGFYTEQ-----SAVINYLD 132
EI G PG+GKTQL +QLAV+VQIP FGG+ G+A++I F ++ +A I +L
Sbjct: 2 EICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQ 61
Query: 133 KFVSEHK 139
+HK
Sbjct: 62 LIAEKHK 68
>UNIPROTKB|E1BE93 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5890 KO:K10869 OMA:CIMMSVL
GeneTree:ENSGT00550000074609 EMBL:DAAA02029475 EMBL:DAAA02029476
EMBL:DAAA02029477 EMBL:DAAA02029478 IPI:IPI00729339
RefSeq:NP_001180066.1 UniGene:Bt.25511 Ensembl:ENSBTAT00000025252
GeneID:617007 KEGG:bta:617007 NextBio:20900440 Uniprot:E1BE93
Length = 364
Score = 146 (56.5 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 32/87 (36%), Positives = 48/87 (55%)
Query: 40 QTAWDMLQEE--QESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
QTA+++ + S A ++T+ + LD L GG+ C +TEI G PG GKTQ I +++
Sbjct: 79 QTAYEIKTQRCAAHSSAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSIL 138
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQ 124
+P GGL G +YI F E+
Sbjct: 139 ATLPTNMGGLEGAVVYIDTESAFSAER 165
Score = 69 (29.3 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 29/83 (34%), Positives = 41/83 (49%)
Query: 121 YTEQSA--VINYLDKFVSE--HKDVKVVIIDSIAFHFRHGFVDLAL------RTRVLSGI 170
Y E S V+ ++ E K VK+VIIDS+A R F D L R + L+
Sbjct: 194 YRELSCDEVLQRIESLEEEIISKGVKLVIIDSVASVVRKEF-DTQLQGNVRERNKFLARE 252
Query: 171 ALKLMNLAKKFSLALLEPNLATT 193
A L LA++FS+ ++ N TT
Sbjct: 253 AASLKYLAEEFSIPVILTNQITT 275
>UNIPROTKB|Q08DH8 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0005759
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HOGENOM:HOG000239162
KO:K10880 EMBL:BC123742 IPI:IPI00717766 RefSeq:NP_001071585.1
UniGene:Bt.41484 ProteinModelPortal:Q08DH8 STRING:Q08DH8
PRIDE:Q08DH8 Ensembl:ENSBTAT00000013145 GeneID:768244
KEGG:bta:768244 CTD:7517 HOVERGEN:HBG054179 InParanoid:Q08DH8
OMA:INQVTEA OrthoDB:EOG47D9GS NextBio:20918540 Uniprot:Q08DH8
Length = 341
Score = 147 (56.8 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 38 GTQTAWDMLQEE---QESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQL 94
G TA +L++E E R++ C LD +L GG+ +TE+ G GKTQL +QL
Sbjct: 61 GVCTALHLLRQEGPFPEQHQRLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQL 120
Query: 95 AVNVQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFR 154
+ VQ+P GGLG A+Y+ C TE + L + +++ + ++ + + R
Sbjct: 121 CLAVQLPPRHGGLGAGAVYV--C----TEDAFPSRRLQQLIAQQQRLRADVPGHVISKIR 174
Query: 155 HG 156
G
Sbjct: 175 FG 176
Score = 62 (26.9 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 142 KVVIIDSIAFHFRHGF--VDLALRTRVLSGIALKLMNLAKKFSLALLEPNLATTA 194
++V+IDS+A FR F LALR + L + +L L+ F +L N T A
Sbjct: 208 RLVVIDSVAAPFRCEFDGAALALRAQRLLALGAELRRLSCAFRSPVLCVNQVTEA 262
>UNIPROTKB|Q9P972 [details] [associations]
symbol:LIM15/DMC1 homolog "LIM15/DMC1 homolog protein"
species:5346 "Coprinopsis cinerea" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
HSSP:Q06609 EMBL:AB036801 ProteinModelPortal:Q9P972 Uniprot:Q9P972
Length = 345
Score = 134 (52.2 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 34/108 (31%), Positives = 54/108 (50%)
Query: 8 ISATQRGKLISAGYTXXXXXXXXXXXXXXRGTQTAWDM-LQEEQESLARITTSCADLDNI 66
I T+R L G + G+ A + +Q++++ + I+T +D I
Sbjct: 59 IMTTRRQLLKIKGMSEAKVEKIKEAAQKIHGSSFATGVEIQDKRKRVLVISTGSKLVDGI 118
Query: 67 LGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGGKAIYI 114
LGGG+ + +TE+ G GKTQL ++V Q+P E+GG GK YI
Sbjct: 119 LGGGVMSQSITEVYGEYRTGKTQLAHTMSVVAQLPPEYGGAAGKVAYI 166
Score = 83 (34.3 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 120 FYTE-QSAVINYLDKFVSEHKDVKVVIIDSIAFHFR---HGFVDLALRTRVLSGIALKLM 175
F +E Q +IN +E KD +++IIDSI FR G +L+ R + L+ + KL
Sbjct: 201 FNSEHQMELINECSARFAEDKDFRLLIIDSIMALFRVDYSGRGELSERQQKLAQMLSKLT 260
Query: 176 NLAKKFSLALLEPN 189
L+++F++A+L N
Sbjct: 261 KLSEEFNIAVLMTN 274
>MGI|MGI:1099436 [details] [associations]
symbol:Rad51b "RAD51 homolog B" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
MGI:MGI:1099436 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5890 HOVERGEN:HBG061476 KO:K10869 OMA:CIMMSVL
EMBL:U92068 EMBL:AK015771 EMBL:AK032913 IPI:IPI00331068
IPI:IPI00399712 RefSeq:NP_001239491.1 RefSeq:NP_033040.2
UniGene:Mm.341756 ProteinModelPortal:O35719 SMR:O35719
MINT:MINT-205633 STRING:O35719 PhosphoSite:O35719 PRIDE:O35719
Ensembl:ENSMUST00000079533 GeneID:19363 KEGG:mmu:19363
UCSC:uc007oai.1 UCSC:uc007oaj.1 GeneTree:ENSGT00550000074609
HOGENOM:HOG000154062 InParanoid:O35719 OrthoDB:EOG4G4GQP
NextBio:296429 Bgee:O35719 CleanEx:MM_RAD51L1 Genevestigator:O35719
Uniprot:O35719
Length = 350
Score = 145 (56.1 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 35/88 (39%), Positives = 46/88 (52%)
Query: 40 QTAWDMLQEEQESLARI---TTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAV 96
QTA+++ L+ TT CA LD L GG+ C +TEI G PG GKTQ I ++V
Sbjct: 65 QTAYELKTRRSAHLSPAFLSTTLCA-LDEALHGGVPCGSLTEITGPPGCGKTQFCIMMSV 123
Query: 97 NVQIPVEFGGLGGKAIYIGKCLGFYTEQ 124
+P GGL G +YI F E+
Sbjct: 124 LATLPTSLGGLEGAVVYIDTESAFTAER 151
Score = 59 (25.8 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 139 KDVKVVIIDSIAFHFRHGFV-----DLALRTRVLSGIALKLMNLAKKFSLALLEPNLATT 193
K VK+VI+DSIA R F ++ R + L A L LA +FS+ ++ N TT
Sbjct: 202 KGVKLVIVDSIASVVRKEFDPKLQGNIKERNKFLGKGASLLKYLAGEFSIPVILTNQITT 261
>FB|FBgn0003482 [details] [associations]
symbol:spn-D "spindle D" species:7227 "Drosophila
melanogaster" [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0048477 "oogenesis" evidence=IGI;TAS]
[GO:0007294 "germarium-derived oocyte fate determination"
evidence=IGI] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0009951 "polarity
specification of dorsal/ventral axis" evidence=IMP] [GO:0030720
"oocyte localization involved in germarium-derived egg chamber
formation" evidence=IMP] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=TAS] [GO:0009994 "oocyte differentiation" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IMP] [GO:0046843 "dorsal appendage formation"
evidence=IMP] InterPro:IPR020588 PROSITE:PS50162 EMBL:AE014297
GO:GO:0005524 GO:GO:0009949 GO:GO:0007294 GO:GO:0003677
GO:GO:0006200 GO:GO:0008298 GO:GO:0046843 GO:GO:0031023
GO:GO:0030720 GO:GO:0030717 GO:GO:0007131 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 GeneTree:ENSGT00550000074609
KO:K10870 GO:GO:0009951 HSSP:Q06609 EMBL:AY071162 EMBL:AY257540
RefSeq:NP_733200.1 UniGene:Dm.6085 SMR:Q8SZ30 STRING:Q8SZ30
EnsemblMetazoa:FBtr0085116 GeneID:318579 KEGG:dme:Dmel_CG31069
UCSC:CG31069-RA CTD:318579 FlyBase:FBgn0003482 InParanoid:Q8SZ30
OMA:CLNVQIP OrthoDB:EOG4MKKZ1 GenomeRNAi:318579 NextBio:845512
Uniprot:Q8SZ30
Length = 270
Score = 138 (53.6 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 32/85 (37%), Positives = 46/85 (54%)
Query: 40 QTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQ 99
++ WD+ Q +I T LD GGGI + E+ G G GKTQ+ +QL +NVQ
Sbjct: 33 KSCWDISQSASN---KILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQ 89
Query: 100 IPVEFGGLGGKAIYIGKCLGFYTEQ 124
IP GGL G A++I F+ ++
Sbjct: 90 IPKAAGGLEGSALFIDTRQDFHPDR 114
Score = 66 (28.3 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 137 EHKDVKVVIIDSIAFHFRHGFVDLALRTRVLSGIALKLMNLAKKFSLALLEPNLAT 192
+H D+K+++IDS+AF R D A R +L + + L ++ L + N+ T
Sbjct: 166 DHPDIKLIVIDSLAFTLRM-LEDGAHRYEMLLELHESMRRLQRQHELTWVFTNVLT 220
>UNIPROTKB|O15315 [details] [associations]
symbol:RAD51B "DNA repair protein RAD51 homolog 2"
species:9606 "Homo sapiens" [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=TAS] [GO:0006310 "DNA
recombination" evidence=TAS] [GO:0007131 "reciprocal meiotic
recombination" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007596 "blood coagulation" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_604
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
GO:GO:0005524 GO:GO:0005654 EMBL:CH471061 GO:GO:0003677
GO:GO:0007596 GO:GO:0006281 GO:GO:0007131 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 MIM:150699 EMBL:U92074 EMBL:U84138 EMBL:Y15571
EMBL:BX161515 EMBL:BX248061 EMBL:BX248766 EMBL:DQ160197
EMBL:AC004518 EMBL:CR536560 EMBL:BC030219 EMBL:AY138857
EMBL:AY138858 EMBL:AY138859 IPI:IPI00006105 IPI:IPI00220523
IPI:IPI00386489 IPI:IPI00386490 IPI:IPI00395987 RefSeq:NP_002868.1
RefSeq:NP_598193.2 RefSeq:NP_598194.1 UniGene:Hs.172587
ProteinModelPortal:O15315 SMR:O15315 IntAct:O15315 MINT:MINT-224850
STRING:O15315 PhosphoSite:O15315 PRIDE:O15315 DNASU:5890
Ensembl:ENST00000390683 Ensembl:ENST00000471583
Ensembl:ENST00000487270 Ensembl:ENST00000488612 GeneID:5890
KEGG:hsa:5890 UCSC:uc001xkd.3 UCSC:uc001xke.3 UCSC:uc001xkf.2
UCSC:uc001xkg.2 UCSC:uc010aqr.3 CTD:5890 GeneCards:GC14P068287
H-InvDB:HIX0022466 HGNC:HGNC:9822 HPA:CAB016191 MIM:602948
neXtProt:NX_O15315 PharmGKB:PA34178 HOVERGEN:HBG061476
InParanoid:O15315 KO:K10869 OMA:CIMMSVL PhylomeDB:O15315
ChiTaRS:RAD51B GenomeRNAi:5890 NextBio:22908 ArrayExpress:O15315
Bgee:O15315 Genevestigator:O15315 Uniprot:O15315
Length = 384
Score = 142 (55.0 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 32/87 (36%), Positives = 47/87 (54%)
Query: 40 QTAWDMLQEEQE--SLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
QTA+ + + S A ++T+ + LD L GG+ C +TEI G PG GKTQ I +++
Sbjct: 65 QTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSIL 124
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQ 124
+P GGL G +YI F E+
Sbjct: 125 ATLPTNMGGLEGAVVYIDTESAFSAER 151
Score = 65 (27.9 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 139 KDVKVVIIDSIAFHFRHGFV-----DLALRTRVLSGIALKLMNLAKKFSLALLEPNLATT 193
K +K+VI+DS+A R F +L R + L+ A L LA++FS+ ++ N TT
Sbjct: 202 KGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITT 261
>UNIPROTKB|C9JYJ0 [details] [associations]
symbol:RAD51B "DNA repair protein RAD51 homolog 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
HGNC:HGNC:9822 ChiTaRS:RAD51B HOGENOM:HOG000154062 EMBL:AL121595
EMBL:AL121820 EMBL:AL122013 EMBL:AL132986 EMBL:AL133313
EMBL:AL133370 EMBL:AL136294 EMBL:AL157915 EMBL:AL589168
IPI:IPI00945688 ProteinModelPortal:C9JYJ0 SMR:C9JYJ0 STRING:C9JYJ0
Ensembl:ENST00000487861 ArrayExpress:C9JYJ0 Bgee:C9JYJ0
Uniprot:C9JYJ0
Length = 425
Score = 142 (55.0 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 32/87 (36%), Positives = 47/87 (54%)
Query: 40 QTAWDMLQEEQE--SLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
QTA+ + + S A ++T+ + LD L GG+ C +TEI G PG GKTQ I +++
Sbjct: 65 QTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSIL 124
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQ 124
+P GGL G +YI F E+
Sbjct: 125 ATLPTNMGGLEGAVVYIDTESAFSAER 151
Score = 65 (27.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 139 KDVKVVIIDSIAFHFRHGFV-----DLALRTRVLSGIALKLMNLAKKFSLALLEPNLATT 193
K +K+VI+DS+A R F +L R + L+ A L LA++FS+ ++ N TT
Sbjct: 202 KGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITT 261
>ZFIN|ZDB-GENE-050320-116 [details] [associations]
symbol:xrcc3 "X-ray repair complementing defective
repair in Chinese hamster cells 3" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 ZFIN:ZDB-GENE-050320-116
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 EMBL:BX255905
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HOVERGEN:HBG054179
OMA:INQVTEA IPI:IPI00494088 UniGene:Dr.75660
Ensembl:ENSDART00000010564 InParanoid:Q5TZD9 Uniprot:Q5TZD9
Length = 352
Score = 146 (56.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 41/118 (34%), Positives = 62/118 (52%)
Query: 41 TAWDMLQEEQESLA---RITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
TA ++Q E L R++ +C LD ++ GG+ R +TE+ G GKTQ +QL ++
Sbjct: 64 TALQLIQGECPVLEPGHRLSFACPVLDGLMRGGLPLRGITELAGESAAGKTQFCLQLCLS 123
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHK----DVKVVIIDSIAF 151
VQ P E GGL A+YI C TE S I L + +++ D+ +I S+ F
Sbjct: 124 VQYPQEHGGLNSGAVYI--C----TEDSFPIKRLRQLITQQPRLRPDLPPALIHSLRF 175
Score = 53 (23.7 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 141 VKVVIIDSIAFHFRHGF-VDLAL-RTRVLSGIALKLMNLAKKFSLALLEPNLAT 192
V+++++DS+A FR F D A+ R+R L + L L+ ++ +L N T
Sbjct: 207 VRLLVVDSVAALFRSEFQADEAVQRSRHLLAFSSTLHRLSHTYAAPVLCVNQVT 260
>UNIPROTKB|F1S9W9 [details] [associations]
symbol:XRCC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0003677 GO:GO:0006281
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 OMA:INQVTEA
EMBL:CU694215 Ensembl:ENSSSCT00000002829 Uniprot:F1S9W9
Length = 347
Score = 142 (55.0 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 47 QEEQ--ESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEF 104
QEE+ E R++ C LD +L GG+ +TE+ G GKTQL +QL + VQ+P +
Sbjct: 72 QEEEFPEQHQRLSLGCPVLDGLLRGGLPLDGITELAGRSSTGKTQLALQLCLAVQLPRQH 131
Query: 105 GGLGGKAIYI 114
GGLG A+Y+
Sbjct: 132 GGLGTGAVYV 141
Score = 60 (26.2 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 142 KVVIIDSIAFHFRHGFV--DLALRTRVLSGIALKLMNLAKKFSLALLEPNLATTA 194
++++IDS+A FR F D A R R L + +L L+ F +L N T A
Sbjct: 209 RLLVIDSVAAPFRCEFAGADSARRARRLQALGAELRRLSCAFRSPVLCINQVTEA 263
>UNIPROTKB|G5EGG8 [details] [associations]
symbol:rad-51 "RecA/Rad51/Dmc1-like protein" species:6239
"Caenorhabditis elegans" [GO:0006310 "DNA recombination"
evidence=IDA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0035188
GO:GO:0043066 GO:GO:0042771 GO:GO:0003684 GO:GO:0006281
GO:GO:0003690 GO:GO:0000794 GO:GO:0045132 SUPFAM:SSF47794
GO:GO:0008094 GO:GO:0010032 GO:GO:0043073 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150
KO:K04482 GeneTree:ENSGT00550000074609 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838 EMBL:AF061201
EMBL:AB011382 PIR:T37305 RefSeq:NP_001023466.1 UniGene:Cel.19596
ProteinModelPortal:G5EGG8 SMR:G5EGG8 IntAct:G5EGG8
EnsemblMetazoa:Y43C5A.6b GeneID:177914 KEGG:cel:CELE_Y43C5A.6
CTD:177914 WormBase:Y43C5A.6b NextBio:898916 Uniprot:G5EGG8
Length = 357
Score = 139 (54.0 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 33/80 (41%), Positives = 44/80 (55%)
Query: 49 EQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLG 108
++ L +I T A LD +LGGGI +TE+ G GKTQL LAV Q+P++ GG
Sbjct: 111 KRSQLVQIRTGSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGE 170
Query: 109 GKAIYIGKCLGFYTEQSAVI 128
GK +YI F E+ I
Sbjct: 171 GKCMYIDTNATFRPERIIAI 190
Score = 64 (27.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 22/67 (32%), Positives = 33/67 (49%)
Query: 126 AVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFV---DLALRTRVLSGIALKLMNLAKKFS 182
A+I +SE + VVI+D HFR+ + DLA R LS L LA ++
Sbjct: 218 ALIIRAGAMMSESR-YAVVIVDCATAHFRNEYTGRGDLAERQMKLSAFLKCLAKLADEYG 276
Query: 183 LALLEPN 189
+A++ N
Sbjct: 277 VAVIITN 283
>WB|WBGene00004297 [details] [associations]
symbol:rad-51 species:6239 "Caenorhabditis elegans"
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0009432 "SOS
response" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0033554 "cellular
response to stress" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0035188 "hatching" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0042771 "intrinsic apoptotic
signaling pathway in response to DNA damage by p53 class mediator"
evidence=IGI] [GO:0010032 "meiotic chromosome condensation"
evidence=IMP] [GO:0043073 "germ cell nucleus" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0000150 "recombinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA
helicase binding" evidence=IPI] [GO:0003690 "double-stranded DNA
binding" evidence=IDA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0035188
GO:GO:0043066 GO:GO:0042771 GO:GO:0003684 GO:GO:0006281
GO:GO:0003690 GO:GO:0000794 GO:GO:0045132 SUPFAM:SSF47794
GO:GO:0008094 GO:GO:0010032 GO:GO:0043073 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838 UniGene:Cel.19596
GeneID:177914 KEGG:cel:CELE_Y43C5A.6 CTD:177914 NextBio:898916
RefSeq:NP_001023465.1 ProteinModelPortal:Q95Q25 SMR:Q95Q25
DIP:DIP-25225N IntAct:Q95Q25 MINT:MINT-226974 STRING:Q95Q25
EnsemblMetazoa:Y43C5A.6a UCSC:Y43C5A.6b WormBase:Y43C5A.6a
InParanoid:Q95Q25 ArrayExpress:Q95Q25 Uniprot:Q95Q25
Length = 395
Score = 139 (54.0 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 33/80 (41%), Positives = 44/80 (55%)
Query: 49 EQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLG 108
++ L +I T A LD +LGGGI +TE+ G GKTQL LAV Q+P++ GG
Sbjct: 149 KRSQLVQIRTGSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGE 208
Query: 109 GKAIYIGKCLGFYTEQSAVI 128
GK +YI F E+ I
Sbjct: 209 GKCMYIDTNATFRPERIIAI 228
Score = 64 (27.6 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 22/67 (32%), Positives = 33/67 (49%)
Query: 126 AVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFV---DLALRTRVLSGIALKLMNLAKKFS 182
A+I +SE + VVI+D HFR+ + DLA R LS L LA ++
Sbjct: 256 ALIIRAGAMMSESR-YAVVIVDCATAHFRNEYTGRGDLAERQMKLSAFLKCLAKLADEYG 314
Query: 183 LALLEPN 189
+A++ N
Sbjct: 315 VAVIITN 321
>UNIPROTKB|Q95Q25 [details] [associations]
symbol:rad-51 "Protein RAD-51, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006310 "DNA recombination"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0035188 GO:GO:0043066 GO:GO:0042771
GO:GO:0003684 GO:GO:0006281 GO:GO:0003690 GO:GO:0000794
GO:GO:0045132 SUPFAM:SSF47794 GO:GO:0008094 GO:GO:0010032
GO:GO:0043073 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150
KO:K04482 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838
UniGene:Cel.19596 GeneID:177914 KEGG:cel:CELE_Y43C5A.6 CTD:177914
NextBio:898916 RefSeq:NP_001023465.1 ProteinModelPortal:Q95Q25
SMR:Q95Q25 DIP:DIP-25225N IntAct:Q95Q25 MINT:MINT-226974
STRING:Q95Q25 EnsemblMetazoa:Y43C5A.6a UCSC:Y43C5A.6b
WormBase:Y43C5A.6a InParanoid:Q95Q25 ArrayExpress:Q95Q25
Uniprot:Q95Q25
Length = 395
Score = 139 (54.0 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 33/80 (41%), Positives = 44/80 (55%)
Query: 49 EQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLG 108
++ L +I T A LD +LGGGI +TE+ G GKTQL LAV Q+P++ GG
Sbjct: 149 KRSQLVQIRTGSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGE 208
Query: 109 GKAIYIGKCLGFYTEQSAVI 128
GK +YI F E+ I
Sbjct: 209 GKCMYIDTNATFRPERIIAI 228
Score = 64 (27.6 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 22/67 (32%), Positives = 33/67 (49%)
Query: 126 AVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFV---DLALRTRVLSGIALKLMNLAKKFS 182
A+I +SE + VVI+D HFR+ + DLA R LS L LA ++
Sbjct: 256 ALIIRAGAMMSESR-YAVVIVDCATAHFRNEYTGRGDLAERQMKLSAFLKCLAKLADEYG 314
Query: 183 LALLEPN 189
+A++ N
Sbjct: 315 VAVIITN 321
>RGD|1560681 [details] [associations]
symbol:Rad51b "RAD51 homolog B (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1560681
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 GeneTree:ENSGT00550000074609
OrthoDB:EOG4G4GQP IPI:IPI00367665 Ensembl:ENSRNOT00000016459
UCSC:RGD:1560681 Uniprot:D4A4Y7
Length = 258
Score = 142 (55.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 32/87 (36%), Positives = 46/87 (52%)
Query: 40 QTAWDMLQEEQESL--ARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
QTA+++ L A ++T+ LD L GG+ C +TE+ G PG GKTQ I ++V
Sbjct: 65 QTAYELKTRRSAHLSPAFLSTTLGALDEALHGGVPCGSLTEVTGPPGCGKTQFCIMMSVL 124
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQ 124
+P GGL G +YI F E+
Sbjct: 125 ATLPTRLGGLEGAVLYIDTESAFTAER 151
Score = 45 (20.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 139 KDVKVVIIDSIAFHFRHGF 157
K VK+VI+DSIA R F
Sbjct: 202 KGVKLVIVDSIASVVRKEF 220
>UNIPROTKB|Q7KZJ0 [details] [associations]
symbol:RAD51C "cDNA FLJ76539, highly similar to Homo
sapiens RAD51 homolog C (S. cerevisiae) (RAD51C), transcript
variant 3, mRNA" species:9606 "Homo sapiens" [GO:0007066 "female
meiosis sister chromatid cohesion" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008821 "crossover junction endodeoxyribonuclease
activity" evidence=IEA] GO:GO:0007283 EMBL:CH471109 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0007066 EMBL:AC025521 HSSP:O74036
EMBL:AC011195 UniGene:Hs.412587 HGNC:HGNC:9820 EMBL:BC093930
EMBL:BC101485 EMBL:BT007339 EMBL:AK290487 IPI:IPI01013984
SMR:Q7KZJ0 STRING:Q7KZJ0 Ensembl:ENST00000482007
Ensembl:ENST00000487525 HOVERGEN:HBG052954 Uniprot:Q7KZJ0
Length = 134
Score = 120 (47.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQL 90
TA ++L++E I T C+ LD+ILGGG+ + TEI G PG+GKTQL
Sbjct: 86 TALELLEQEHTQ-GFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQL 134
Score = 42 (19.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 2 EVSKLPISATQRGKLISAGY 21
++ P+S R KL+SAG+
Sbjct: 13 DLVSFPLSPAVRVKLVSAGF 32
>UNIPROTKB|E1BVI8 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 OMA:CIMMSVL GeneTree:ENSGT00550000074609
EMBL:AADN02003180 IPI:IPI00812156 Ensembl:ENSGALT00000015453
Uniprot:E1BVI8
Length = 275
Score = 149 (57.5 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 36/87 (41%), Positives = 46/87 (52%)
Query: 40 QTAWDMLQEEQ--ESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
QTA++M S A + TS LD +L GGI C +TE+ PG GKTQ I ++V
Sbjct: 65 QTAYEMKVRRSINPSAAFLPTSLHSLDKVLHGGIPCGSLTELTSPPGCGKTQFCITMSVL 124
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQ 124
+PV GGL G IYI F E+
Sbjct: 125 ATLPVSMGGLDGAVIYIDTESAFSAER 151
>FB|FBgn0003480 [details] [associations]
symbol:spn-B "spindle B" species:7227 "Drosophila
melanogaster" [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0009951 "polarity specification of
dorsal/ventral axis" evidence=IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IGI] [GO:0009949 "polarity
specification of anterior/posterior axis" evidence=IMP] [GO:0048477
"oogenesis" evidence=IGI;TAS] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0006417 "regulation of translation" evidence=TAS]
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0006281 "DNA
repair" evidence=ISS;NAS] [GO:0030261 "chromosome condensation"
evidence=TAS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0009994 "oocyte differentiation" evidence=NAS] [GO:0006302
"double-strand break repair" evidence=TAS] [GO:0007126 "meiosis"
evidence=TAS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
EMBL:AE014297 GO:GO:0005524 GO:GO:0009949 GO:GO:0007294
GO:GO:0006417 GO:GO:0003677 GO:GO:0006200 GO:GO:0006302
GO:GO:0030261 GO:GO:0008298 GO:GO:0030717 GO:GO:0007131
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HSSP:O74036
GO:GO:0009951 KO:K10880 OMA:YSPETPN EMBL:AF069531 EMBL:BT044133
EMBL:FJ219434 EMBL:FJ219442 EMBL:FJ219445 EMBL:FJ219448
RefSeq:NP_476740.1 UniGene:Dm.4725 SMR:O77135 IntAct:O77135
MINT:MINT-763026 STRING:O77135 EnsemblMetazoa:FBtr0082933
GeneID:41746 KEGG:dme:Dmel_CG3325 UCSC:CG3325-RA CTD:41746
FlyBase:FBgn0003480 HOGENOM:HOG000012350 InParanoid:O77135
OrthoDB:EOG49CNQT GenomeRNAi:41746 NextBio:825371 Uniprot:O77135
Length = 341
Score = 149 (57.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 54 ARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGGKAIY 113
+R++ C+ LD GGG+ R +TE+ G G+GKTQL +QL++ VQ+P E GGLG Y
Sbjct: 86 SRVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAY 145
Query: 114 I 114
I
Sbjct: 146 I 146
>UNIPROTKB|E2RAE7 [details] [associations]
symbol:XRCC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
GeneTree:ENSGT00550000074609 KO:K10880 CTD:7517 OMA:INQVTEA
EMBL:AAEX03006057 RefSeq:XP_003435154.1 Ensembl:ENSCAFT00000029054
GeneID:100687200 KEGG:cfa:100687200 Uniprot:E2RAE7
Length = 349
Score = 131 (51.2 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 55 RITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGGKAIYI 114
R++ C LD +L GG+ VTE+ G+ GKTQL +QL + VQ P GGL A+YI
Sbjct: 81 RLSLGCPVLDRLLRGGLPLDGVTELAGLSSAGKTQLALQLCLAVQFPPRHGGLDAGAMYI 140
Score = 58 (25.5 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 24/71 (33%), Positives = 32/71 (45%)
Query: 142 KVVIIDSIAFHFRHGFVDLAL--RTRVLSGIALKLMNLAKKFSLALLEPNLATTANLAES 199
++V+IDS+A FR F AL R R L + L L+ F +L N T A +
Sbjct: 208 RLVVIDSVAAPFRCEFDGPALVPRARHLQALGAALRRLSCAFQSPVLCINQVTEATEEQG 267
Query: 200 CLTCLRDSGSR 210
T R G R
Sbjct: 268 --TAPRPHGLR 276
>UNIPROTKB|J3QR58 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007066 "female meiosis sister
chromatid cohesion" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 EMBL:AC025521 EMBL:AC011195 HGNC:HGNC:9820
Ensembl:ENST00000461271 Uniprot:J3QR58
Length = 135
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 75 EVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGGKAIYIGKCLGFYTEQ-----SAVIN 129
+ TEI G PG+GKTQL +QLAV+VQIP FGG+ G+A++I F ++ +A I
Sbjct: 2 KTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQ 61
Query: 130 YLDKFVSEHK 139
+L +HK
Sbjct: 62 HLQLIAEKHK 71
Score = 101 (40.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 112 IYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRH 155
IY +C YTE A + L F+SEH V++VI+D IAF FRH
Sbjct: 91 IYYFRCRD-YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRH 133
>ASPGD|ASPL0000094064 [details] [associations]
symbol:AN11929 species:162425 "Emericella nidulans"
[GO:0032545 "CURI complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0034456 "UTP-C complex" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000028 "ribosomal small
subunit assembly" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR012677
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 KO:K10872
InterPro:IPR013632 Pfam:PF08423 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 127 (49.8 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + L +++ + RI+T D+ILGGG ++E+ G GKTQL ++V
Sbjct: 81 GFITAME-LSHQRKRVVRISTGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMSVV 139
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+P + GG GK YI
Sbjct: 140 AQLPKDMGGAEGKVAYI 156
Score = 71 (30.1 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 124 QSAVINYLDK-FVSEHKDVKVVIIDSIAFHFRHGFV---DLALRTRVLSGIALKLMNLAK 179
Q ++N L K FV + +++IIDSI FR F +LA R + L+ +KL ++A+
Sbjct: 196 QLELLNTLSKEFVGG--EYRLLIIDSIMNCFRVDFCGRGELADRQQKLNQFLMKLAHMAE 253
Query: 180 KFSLALLEPN 189
+F++ +L N
Sbjct: 254 EFNVCVLMTN 263
>ASPGD|ASPL0000098803 [details] [associations]
symbol:AN11930 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000150 "recombinase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0006311 "meiotic gene conversion" evidence=IEA]
[GO:0000709 "meiotic joint molecule formation" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR012677 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
Gene3D:3.30.70.330 EMBL:BN001306 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094
eggNOG:COG0468 KO:K10872 InterPro:IPR013632 Pfam:PF08423
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 127 (49.8 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + L +++ + RI+T D+ILGGG ++E+ G GKTQL ++V
Sbjct: 81 GFITAME-LSHQRKRVVRISTGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMSVV 139
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+P + GG GK YI
Sbjct: 140 AQLPKDMGGAEGKVAYI 156
Score = 71 (30.1 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 124 QSAVINYLDK-FVSEHKDVKVVIIDSIAFHFRHGFV---DLALRTRVLSGIALKLMNLAK 179
Q ++N L K FV + +++IIDSI FR F +LA R + L+ +KL ++A+
Sbjct: 196 QLELLNTLSKEFVGG--EYRLLIIDSIMNCFRVDFCGRGELADRQQKLNQFLMKLAHMAE 253
Query: 180 KFSLALLEPN 189
+F++ +L N
Sbjct: 254 EFNVCVLMTN 263
>UNIPROTKB|Q5ARI8 [details] [associations]
symbol:AN9092.2 "Meiotic recombination protein (Dmc1),
putative (AFU_orthologue; AFUA_7G02200)" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR012677
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 KO:K10872
InterPro:IPR013632 Pfam:PF08423 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 127 (49.8 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + L +++ + RI+T D+ILGGG ++E+ G GKTQL ++V
Sbjct: 81 GFITAME-LSHQRKRVVRISTGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMSVV 139
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+P + GG GK YI
Sbjct: 140 AQLPKDMGGAEGKVAYI 156
Score = 71 (30.1 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 124 QSAVINYLDK-FVSEHKDVKVVIIDSIAFHFRHGFV---DLALRTRVLSGIALKLMNLAK 179
Q ++N L K FV + +++IIDSI FR F +LA R + L+ +KL ++A+
Sbjct: 196 QLELLNTLSKEFVGG--EYRLLIIDSIMNCFRVDFCGRGELADRQQKLNQFLMKLAHMAE 253
Query: 180 KFSLALLEPN 189
+F++ +L N
Sbjct: 254 EFNVCVLMTN 263
>UNIPROTKB|E9PNT5 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR003583 InterPro:IPR011941
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00278 GO:GO:0005524
GO:GO:0003684 GO:GO:0006281 EMBL:AC022405 GO:GO:0008094
EMBL:AC012476 InterPro:IPR013632 Pfam:PF08423
PANTHER:PTHR22942:SF12 HGNC:HGNC:9817 ChiTaRS:RAD51 IPI:IPI00980924
ProteinModelPortal:E9PNT5 SMR:E9PNT5 Ensembl:ENST00000527860
UCSC:uc001zmn.1 ArrayExpress:E9PNT5 Bgee:E9PNT5 Uniprot:E9PNT5
Length = 172
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 33/77 (42%), Positives = 45/77 (58%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + Q E + +ITT +LD +L GGI +TE+ G GKTQ+ LAV
Sbjct: 85 GFTTATEFHQRRSE-IIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVT 143
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+P++ GG GKA+YI
Sbjct: 144 CQLPIDRGGGEGKAMYI 160
>UNIPROTKB|Q5ZM26 [details] [associations]
symbol:XRCC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
GeneTree:ENSGT00550000074609 HOGENOM:HOG000239162 KO:K10880
CTD:7517 HOVERGEN:HBG054179 OMA:INQVTEA OrthoDB:EOG47D9GS
EMBL:AADN02003784 EMBL:AJ719558 IPI:IPI00684938
RefSeq:NP_001006489.1 UniGene:Gga.3684 STRING:Q5ZM26
Ensembl:ENSGALT00000032496 GeneID:423485 KEGG:gga:423485
InParanoid:Q5ZM26 NextBio:20825955 Uniprot:Q5ZM26
Length = 347
Score = 147 (56.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 41/118 (34%), Positives = 62/118 (52%)
Query: 41 TAWDMLQEEQ---ESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
TA + Q++ +++ C+ LD++L GGI +TE+ G GKTQ+G+QL +
Sbjct: 64 TALQLYQDKDCFSSQCQKLSLGCSVLDDLLKGGIPLVGITELAGESSAGKTQIGLQLCLC 123
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSE-HK---DVKVVIIDSIAF 151
VQ P +GGL A+YI C TE + L + +++ HK DV II I F
Sbjct: 124 VQYPYRYGGLESGAVYI--C----TEDAFPSKRLQQLIAQQHKLRADVPPEIIQKIRF 175
>SGD|S000000981 [details] [associations]
symbol:DMC1 "Meiosis-specific protein required for repair of
double-strand breaks" species:4932 "Saccharomyces cerevisiae"
[GO:0003697 "single-stranded DNA binding" evidence=IDA] [GO:0007126
"meiosis" evidence=IEA;IMP] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0000709 "meiotic joint molecule formation"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0030435
"sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 SGD:S000000981 GO:GO:0005524
GO:GO:0016887 GO:GO:0030435 EMBL:BK006939 GO:GO:0003690
GO:GO:0003697 GO:GO:0000794 EMBL:U18922 SUPFAM:SSF47794
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
GO:GO:0000150 OrthoDB:EOG43XZC8 GO:GO:0000709 EMBL:M87549
EMBL:D10865 PIR:A38214 RefSeq:NP_011106.1 ProteinModelPortal:P25453
SMR:P25453 DIP:DIP-110N IntAct:P25453 MINT:MINT-387175
STRING:P25453 PeptideAtlas:P25453 EnsemblFungi:YER179W
GeneID:856926 KEGG:sce:YER179W CYGD:YER179w NextBio:983398
Genevestigator:P25453 GermOnline:YER179W Uniprot:P25453
Length = 334
Score = 122 (48.0 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 27/59 (45%), Positives = 34/59 (57%)
Query: 56 ITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGGKAIYI 114
++T LD+ILGGGI +TE+ G GKTQ+ L V Q+P E GG GK YI
Sbjct: 96 LSTGSKQLDSILGGGIMTMSITEVFGEFRCGKTQMSHTLCVTTQLPREMGGGEGKVAYI 154
Score = 64 (27.6 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 19/69 (27%), Positives = 39/69 (56%)
Query: 124 QSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFV---DLALRTRVLSGIALKLMNLAKK 180
Q ++ L + +S D +++++DSI +FR + +L+ R + L+ KL LA++
Sbjct: 194 QMELVEQLGEELSSG-DYRLIVVDSIMANFRVDYCGRGELSERQQKLNQHLFKLNRLAEE 252
Query: 181 FSLALLEPN 189
F++A+ N
Sbjct: 253 FNVAVFLTN 261
>UNIPROTKB|G4MNW7 [details] [associations]
symbol:MGG_06985 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
EMBL:CM001231 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
KO:K10958 RefSeq:XP_003709736.1 ProteinModelPortal:G4MNW7
EnsemblFungi:MGG_06985T0 GeneID:2685158 KEGG:mgr:MGG_06985
Uniprot:G4MNW7
Length = 548
Score = 117 (46.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 30/59 (50%), Positives = 36/59 (61%)
Query: 56 ITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGGKAIYI 114
I+T +LD LGGGI VTEI G G GKTQ + L + VQ+P G LG KA+YI
Sbjct: 137 ISTLDPELDAALGGGIPTGYVTEITGESGAGKTQFLLSLLLAVQLPPPHG-LGRKAMYI 194
Score = 75 (31.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 21/79 (26%), Positives = 42/79 (53%)
Query: 118 LGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGF-------VDLALRTRVLSGI 170
LG Q ++++ + ++V ++I+DS+A +FR + LA R+ L +
Sbjct: 233 LGDIEAQDHILSFQVPLEAARRNVGLIILDSVAANFRAEYDAAGSRSTGLAARSAELVRL 292
Query: 171 ALKLMNLAKKFSLALLEPN 189
++L NLA+ +LA++ N
Sbjct: 293 GMQLRNLARSLNLAVVVAN 311
>UNIPROTKB|O43542 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9606 "Homo
sapiens" [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0010033 "response to organic substance" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006281 "DNA repair"
evidence=IGI] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 MIM:114480 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOGENOM:HOG000239162 KO:K10880 CTD:7517
HOVERGEN:HBG054179 OMA:INQVTEA OrthoDB:EOG47D9GS EMBL:AF035586
EMBL:AF037222 EMBL:AF508041 EMBL:BC001036 EMBL:BC002949
EMBL:BC011725 IPI:IPI00023073 RefSeq:NP_001093588.1
RefSeq:NP_001093589.1 RefSeq:NP_005423.1 UniGene:Hs.592325
UniGene:Hs.733412 ProteinModelPortal:O43542 SMR:O43542
IntAct:O43542 STRING:O43542 PhosphoSite:O43542 PaxDb:O43542
PRIDE:O43542 DNASU:7517 Ensembl:ENST00000352127
Ensembl:ENST00000445556 Ensembl:ENST00000553264
Ensembl:ENST00000554913 Ensembl:ENST00000555055 GeneID:7517
KEGG:hsa:7517 UCSC:uc001ynx.4 GeneCards:GC14M104163 HGNC:HGNC:12830
MIM:600675 MIM:613972 neXtProt:NX_O43542 PharmGKB:PA37422
InParanoid:O43542 PhylomeDB:O43542 GenomeRNAi:7517 NextBio:29415
ArrayExpress:O43542 Bgee:O43542 CleanEx:HS_XRCC3
Genevestigator:O43542 GermOnline:ENSG00000126215 Uniprot:O43542
Length = 346
Score = 126 (49.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 55 RITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGGKAIYI 114
R++ C LD +L GG+ +TE+ G GKTQL +QL + VQ P + GGL A+YI
Sbjct: 81 RLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYI 140
Score = 56 (24.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 142 KVVIIDSIAFHFRHGFVDLAL--RTRVLSGIALKLMNLAKKFSLALLEPNLATTA 194
++V+IDS+A FR F A R R L + L L+ F +L N T A
Sbjct: 208 RLVVIDSVAAPFRCEFDSQASAPRARHLQSLGATLRELSSAFQSPVLCINQVTEA 262
>MGI|MGI:1921585 [details] [associations]
symbol:Xrcc3 "X-ray repair complementing defective repair in
Chinese hamster cells 3" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] InterPro:IPR020588 PROSITE:PS50162 MGI:MGI:1921585
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0005759
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HOGENOM:HOG000239162
KO:K10880 CTD:7517 HOVERGEN:HBG054179 OMA:INQVTEA OrthoDB:EOG47D9GS
EMBL:AK014491 IPI:IPI00110210 RefSeq:NP_083151.1 UniGene:Mm.19082
ProteinModelPortal:Q9CXE6 SMR:Q9CXE6 STRING:Q9CXE6
PhosphoSite:Q9CXE6 PRIDE:Q9CXE6 DNASU:74335
Ensembl:ENSMUST00000021715 GeneID:74335 KEGG:mmu:74335
UCSC:uc007pdz.1 InParanoid:Q9CXE6 NextBio:340475 Bgee:Q9CXE6
Genevestigator:Q9CXE6 GermOnline:ENSMUSG00000021287 Uniprot:Q9CXE6
Length = 349
Score = 143 (55.4 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 42/134 (31%), Positives = 69/134 (51%)
Query: 37 RGTQ--TAWDMLQEEQ---ESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLG 91
RG++ +A + Q+++ E R++ C LD LGGG+ +T + G GKTQL
Sbjct: 58 RGSRVLSALHLFQQKESFPEQHQRLSLGCPVLDQFLGGGLPLEGITGLAGCSSAGKTQLA 117
Query: 92 IQLAVNVQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHK----DVKVVIID 147
+QL + VQ P ++GGL A+YI C TE + L + +++ + D +I+
Sbjct: 118 LQLCLAVQFPRQYGGLEAGAVYI--C----TEDAFPSKRLWQLIAQQRRLRTDAPEELIE 171
Query: 148 SIAFHFRHGFVDLA 161
I F H F++ A
Sbjct: 172 KIRFS-NHIFIEHA 184
>RGD|1306849 [details] [associations]
symbol:Xrcc3 "X-ray repair complementing defective repair in
Chinese hamster cells 3" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0010033 "response to organic substance"
evidence=IEP] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1306849
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0003677 GO:GO:0006281 GO:GO:0010033 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 OrthoDB:EOG47D9GS
IPI:IPI00368372 Ensembl:ENSRNOT00000016208 UCSC:RGD:2325124
Uniprot:D4A5N4
Length = 349
Score = 142 (55.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 40/130 (30%), Positives = 62/130 (47%)
Query: 37 RGTQ--TAWDMLQEEQ---ESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLG 91
RG++ TA + Q+ + E R++ C LD LGGG+ +T + G GKTQL
Sbjct: 58 RGSRVLTALHLFQQRESFPEQHQRLSLGCPVLDQFLGGGLPLEGITGLAGRSSAGKTQLA 117
Query: 92 IQLAVNVQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAF 151
+QL + VQ P ++GGL A+YI C + +++ DV + I F
Sbjct: 118 LQLCLAVQFPRQYGGLEAGAVYI--CTEDAFPSKRLWQLIEQLQELRTDVPGEVTQKIRF 175
Query: 152 HFRHGFVDLA 161
H F++ A
Sbjct: 176 G-NHIFIEHA 184
>ZFIN|ZDB-GENE-060331-93 [details] [associations]
symbol:dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination (yeast)" species:7955
"Danio rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
ZFIN:ZDB-GENE-060331-93 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504
EMBL:AB182999 IPI:IPI00832294 RefSeq:NP_001018618.1
UniGene:Dr.92382 ProteinModelPortal:Q50LF4 SMR:Q50LF4 STRING:Q50LF4
GeneID:553953 KEGG:dre:553953 InParanoid:Q50LF4 NextBio:20880545
Uniprot:Q50LF4
Length = 342
Score = 141 (54.7 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 40/118 (33%), Positives = 60/118 (50%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G QTA + + ++ + ITT + D +LGGG+ +TE G GKTQL L V
Sbjct: 86 GFQTASEYCIKRKQ-VFHITTGSLEFDKLLGGGVESMAITEAFGEFRTGKTQLSHTLCVT 144
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRH 155
Q+P E+G GGK I+I F E+ I D+F +H+ V ++ + A+ H
Sbjct: 145 AQLPGEYGYTGGKVIFIDTENTFRPERLKDI--ADRFNVDHEAVLDNVLYARAYTSEH 200
>TAIR|locus:2084558 [details] [associations]
symbol:DMC1 "DISRUPTION OF MEIOTIC CONTROL 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA;IDA] [GO:0006281
"DNA repair" evidence=ISS] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA;ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051026 "chiasma assembly" evidence=IGI;IMP] [GO:0006302
"double-strand break repair" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA;TAS] [GO:0010212 "response to ionizing radiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0006259 EMBL:AP001300 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0000733 GO:GO:0008094 GO:GO:0051026 EMBL:D45415 EMBL:U76670
EMBL:BT023447 IPI:IPI00517160 PIR:JC4092 RefSeq:NP_188928.2
UniGene:At.50216 ProteinModelPortal:Q39009 SMR:Q39009 IntAct:Q39009
MINT:MINT-5222993 STRING:Q39009 EnsemblPlants:AT3G22880.1
GeneID:821860 KEGG:ath:AT3G22880 GeneFarm:4784 TAIR:At3g22880
eggNOG:COG0468 HOGENOM:HOG000227426 InParanoid:Q39009 KO:K10872
OMA:FFQDIDL PhylomeDB:Q39009 ProtClustDB:PLN03187
Genevestigator:Q39009 GermOnline:AT3G22880 GO:GO:0000707
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 Uniprot:Q39009
Length = 344
Score = 140 (54.3 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 46/154 (29%), Positives = 75/154 (48%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G T D L + ++S+ +ITT C LD++LGGGI +TE G GKTQL L V
Sbjct: 91 GYMTGSDALIK-RKSVVKITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTLCVT 149
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGF 157
Q+P G GK YI F ++ ++ ++F + V II + A+ + H +
Sbjct: 150 TQLPTNMKGGNGKVAYIDTEGTFRPDR--IVPIAERFGMDPGAVLDNIIYARAYTYEHQY 207
Query: 158 VDLALRTRVLSGIALKLMNLAKKFSLALLEPNLA 191
+L G+A K+ + F + +++ +A
Sbjct: 208 -------NLLLGLAAKMSE--EPFRILIVDSIIA 232
>UNIPROTKB|G1K2Z8 [details] [associations]
symbol:RAD51 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0000800 "lateral
element" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006268
"DNA unwinding involved in replication" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0051106 "positive regulation of DNA ligation" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0003684 GO:GO:0006281 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 EMBL:AADN02040043
ProteinModelPortal:G1K2Z8 Ensembl:ENSGALT00000007192 Uniprot:G1K2Z8
Length = 337
Score = 138 (53.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 34/77 (44%), Positives = 45/77 (58%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + Q E + +ITT +LD +L GGI +TE+ G GKTQL LAV
Sbjct: 83 GFTTATEFHQRRSE-IIQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVT 141
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+P++ GG GKA+YI
Sbjct: 142 CQLPIDRGGGEGKAMYI 158
>UNIPROTKB|P37383 [details] [associations]
symbol:RAD51A "DNA repair protein RAD51 homolog 1"
species:9031 "Gallus gallus" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000793
"condensed chromosome" evidence=ISS] [GO:0000794 "condensed nuclear
chromosome" evidence=ISS] [GO:0006268 "DNA unwinding involved in
replication" evidence=ISS] [GO:0000800 "lateral element"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0051106 "positive regulation of DNA ligation"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0005634
"nucleus" evidence=ISS] [GO:0007126 "meiosis" evidence=ISS]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006302 "double-strand break repair"
evidence=TAS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0007126
GO:GO:0048471 GO:GO:0005654 GO:GO:0003684 GO:GO:0016605
GO:GO:0051260 GO:GO:0003690 GO:GO:0003697 GO:GO:0000724
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0000800 Reactome:REACT_115612
eggNOG:COG0468 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268 KO:K04482
GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888 EMBL:L09655
EMBL:S59426 IPI:IPI00593131 PIR:S35642 RefSeq:NP_990504.1
UniGene:Gga.2303 ProteinModelPortal:P37383 SMR:P37383 STRING:P37383
Ensembl:ENSGALT00000032744 GeneID:396086 KEGG:gga:396086
InParanoid:P37383 NextBio:20816144 Uniprot:P37383
Length = 339
Score = 138 (53.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 34/77 (44%), Positives = 45/77 (58%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + Q E + +ITT +LD +L GGI +TE+ G GKTQL LAV
Sbjct: 85 GFTTATEFHQRRSE-IIQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVT 143
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+P++ GG GKA+YI
Sbjct: 144 CQLPIDRGGGEGKAMYI 160
>POMBASE|SPAC8E11.03c [details] [associations]
symbol:dmc1 "RecA family ATPase Dmc1" species:4896
"Schizosaccharomyces pombe" [GO:0000150 "recombinase activity"
evidence=IDA] [GO:0000709 "meiotic joint molecule formation"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=ISM;IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006311 "meiotic gene conversion" evidence=IMP]
[GO:0007131 "reciprocal meiotic recombination" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IPI] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 PomBase:SPAC8E11.03c
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0006281 GO:GO:0051260 GO:GO:0003690 GO:GO:0003697
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468
HOGENOM:HOG000227426 KO:K10872 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 EMBL:AB008545 EMBL:D64035
PIR:T39157 PIR:T51302 RefSeq:NP_594166.1 ProteinModelPortal:O42634
DIP:DIP-29236N IntAct:O42634 STRING:O42634
EnsemblFungi:SPAC8E11.03c.1 GeneID:2542106 KEGG:spo:SPAC8E11.03c
OrthoDB:EOG43XZC8 NextBio:20803178 GO:GO:0006311 GO:GO:0000709
Uniprot:O42634
Length = 332
Score = 117 (46.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
TA ++ Q ++ + I+T L+ ILGGGI +TE+ G GKTQ+ L V Q+
Sbjct: 81 TAMEISQNRKKVWS-ISTGSEALNGILGGGIQSMSITEVFGEFRCGKTQMSHTLCVTAQL 139
Query: 101 PVEFGGLGGKAIYI 114
P + GG GK +I
Sbjct: 140 PRDMGGAEGKVAFI 153
Score = 58 (25.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 18/70 (25%), Positives = 38/70 (54%)
Query: 123 EQSAVINYLDKFVSEHKDVKVVIIDSIAFHFR---HGFVDLALRTRVLSGIALKLMNLAK 179
+Q I L +E +++I+DSI FR G +L+ R + L+ + +L ++++
Sbjct: 192 QQMEYITKLGTIFAEDGQYRLLIVDSIMALFRVDYSGRGELSERQQKLNIMLARLNHISE 251
Query: 180 KFSLALLEPN 189
+F++A+ N
Sbjct: 252 EFNVAVFVTN 261
>UNIPROTKB|Q6FKF0 [details] [associations]
symbol:CAGL0L12100g "Similar to uniprot|P25453
Saccharomyces cerevisiae YER179w meiosis-specific protein"
species:284593 "Candida glabrata CBS 138" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 EMBL:CR380958
GenomeReviews:CR380958_GR KO:K10872 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
RefSeq:XP_449294.1 ProteinModelPortal:Q6FKF0 GeneID:2890684
KEGG:cgr:CAGL0L12100g Uniprot:Q6FKF0
Length = 334
Score = 117 (46.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 50 QESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGG 109
++ + I+T LD++LGGGI +TE+ G GKTQ+ L V Q+P GG G
Sbjct: 90 RQKVISISTGSKQLDSVLGGGIMTMSITEVFGEFRCGKTQMSHTLCVTAQLPKSMGGGEG 149
Query: 110 KAIYI 114
K +I
Sbjct: 150 KVAFI 154
Score = 58 (25.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 143 VVIIDSIAFHFRHGFV---DLALRTRVLSGIALKLMNLAKKFSLALLEPN 189
++I+DSI +FR + +L R + L+ KL LA++F+LA+ N
Sbjct: 212 LIIVDSIMANFRVDYCGRGELNERQQKLNQHLFKLNRLAEEFNLAVFMTN 261
>UNIPROTKB|A3E3X4 [details] [associations]
symbol:rad51 "Rad51" species:4754 "Pneumocystis carinii"
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0003684 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:DQ865192 EMBL:DQ865193
ProteinModelPortal:A3E3X4 SMR:A3E3X4 Uniprot:A3E3X4
Length = 343
Score = 133 (51.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 47/150 (31%), Positives = 75/150 (50%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + Q E L ITT LD +L GGI +TEI G GK+Q+ LAV
Sbjct: 87 GFTTATEFHQRRCE-LISITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVT 145
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGF 157
Q+P++ GG GK +YI G + + ++ D++ ++V +D++A+ +
Sbjct: 146 CQLPIDMGGGEGKCLYIDT-EGTF-RPTRLLAVADRYGLNGEEV----LDNVAYARAYN- 198
Query: 158 VDLALRTRVLSGIALKLMNLAKKFSLALLE 187
D L+ L G A +M +FSL +++
Sbjct: 199 ADHQLQ---LLGQAANMM-AESRFSLLIVD 224
Score = 36 (17.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 8 ISATQRGKLISAGY 21
ISA+ K+I AGY
Sbjct: 35 ISASDIKKIIEAGY 48
>UNIPROTKB|A3E3X6 [details] [associations]
symbol:rad51 "Rad51" species:263815 "Pneumocystis murina"
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0003684 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:DQ865194 EMBL:DQ865195
ProteinModelPortal:A3E3X6 SMR:A3E3X6 Uniprot:A3E3X6
Length = 343
Score = 133 (51.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 47/150 (31%), Positives = 75/150 (50%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + Q E L ITT LD +L GGI +TEI G GK+Q+ LAV
Sbjct: 87 GFTTATEFHQRRCE-LISITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVT 145
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGF 157
Q+P++ GG GK +YI G + + ++ D++ ++V +D++A+ +
Sbjct: 146 CQLPIDMGGGEGKCLYIDT-EGTF-RPTRLLAVADRYGLNGEEV----LDNVAYARAYN- 198
Query: 158 VDLALRTRVLSGIALKLMNLAKKFSLALLE 187
D L+ L G A +M +FSL +++
Sbjct: 199 ADHQLQ---LLGQAANMM-AESRFSLLIVD 224
Score = 36 (17.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 8 ISATQRGKLISAGY 21
ISA+ K+I AGY
Sbjct: 35 ISASDIKKIIEAGY 48
>UNIPROTKB|Q74ZU7 [details] [associations]
symbol:AGR101C "AGR101Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0006281 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0000794 EMBL:AE016820 GenomeReviews:AE016820_GR
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 GO:GO:0000709 RefSeq:NP_986767.1 HSSP:Q06609
ProteinModelPortal:Q74ZU7 STRING:Q74ZU7 EnsemblFungi:AAS54591
GeneID:4623069 KEGG:ago:AGOS_AGR101C PhylomeDB:Q74ZU7
Uniprot:Q74ZU7
Length = 333
Score = 123 (48.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 27/59 (45%), Positives = 34/59 (57%)
Query: 56 ITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGGKAIYI 114
I+T LD+ILGGG+ +TE+ G GKTQ+ L V Q+P E GG GK YI
Sbjct: 95 ISTGSKQLDSILGGGVMTMSITEVFGEFRCGKTQMSHTLCVTAQLPREMGGGEGKVAYI 153
Score = 49 (22.3 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 14/53 (26%), Positives = 31/53 (58%)
Query: 140 DVKVVIIDSIAFHFRHGFV---DLALRTRVLSGIALKLMNLAKKFSLALLEPN 189
D +++I+DSI +FR + +L R + L+ +L +A+++++A+ N
Sbjct: 208 DYRLLIVDSIMANFRVDYCGRGELNERQQKLNQHLSRLNRVAEEYNVAVFMTN 260
>UNIPROTKB|Q50LF7 [details] [associations]
symbol:eDmc1 "RecA homolog DMC1" species:7937 "Anguilla
japonica" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238
HOVERGEN:HBG001504 GO:GO:0000150 EMBL:AB182645 EMBL:AB201845
ProteinModelPortal:Q50LF7 SMR:Q50LF7 Uniprot:Q50LF7
Length = 339
Score = 136 (52.9 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 52/171 (30%), Positives = 81/171 (47%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA++ E ++ + ITT + D ++GGGI +TE G GKTQL L V
Sbjct: 83 GFLTAFEY-SERRKQVFHITTGSLEFDKLIGGGIESMAITEAFGEFRTGKTQLSHTLCVT 141
Query: 98 VQIPVEFGGLGGKAIYIG----------KCLG--FYTEQSAVIN---YLDKFVSEHKDVK 142
Q+P E G GGK I+I K + F +Q AV++ Y + SEH+
Sbjct: 142 AQLPGEDGYTGGKVIFIDTENTFRPDRLKDIADRFSVDQEAVLDNVLYARAYTSEHQ--- 198
Query: 143 VVIIDSIA--FHFRHGFVDLALRTRVLSGIALKLMNLAKKFSLALLEPNLA 191
+ ++D +A FH G L + ++ AL ++ + + LA + LA
Sbjct: 199 MELLDFVAAKFHEEGGVFKLLIIDSIM---ALFRVDFSGRGELAERQQKLA 246
>SGD|S000002411 [details] [associations]
symbol:RAD57 "Protein that stimulates strand exchange"
species:4932 "Saccharomyces cerevisiae" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IPI] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0033062 "Rhp55-Rhp57
complex" evidence=IDA] [GO:0000730 "DNA recombinase assembly"
evidence=IPI] [GO:0000722 "telomere maintenance via recombination"
evidence=IMP] [GO:0045002 "double-strand break repair via
single-strand annealing" evidence=IMP] [GO:0000707 "meiotic DNA
recombinase assembly" evidence=IMP] [GO:0030491 "heteroduplex
formation" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
SGD:S000002411 GO:GO:0005524 GO:GO:0003677 EMBL:BK006938
EMBL:Z48008 GO:GO:0000722 GO:GO:0008094 eggNOG:COG0468
GO:GO:0000707 InterPro:IPR013632 Pfam:PF08423 GO:GO:0030491
GO:GO:0033062 KO:K10958 OrthoDB:EOG4HTD1G EMBL:M65061 PIR:JQ1275
RefSeq:NP_010287.1 ProteinModelPortal:P25301 SMR:P25301
DIP:DIP-4774N IntAct:P25301 MINT:MINT-480305 STRING:P25301
EnsemblFungi:YDR004W GeneID:851567 KEGG:sce:YDR004W CYGD:YDR004w
HOGENOM:HOG000141828 OMA:YITTEGD NextBio:969013
Genevestigator:P25301 GermOnline:YDR004W Uniprot:P25301
Length = 460
Score = 137 (53.3 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 57 TTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGGKAIYI 114
TT+ +D +LGGGI +TEI G GK+QL +QLA++VQ+ GGLGGK +YI
Sbjct: 101 TTADVAMDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYI 158
>UNIPROTKB|Q2KJ94 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISS] [GO:0005759 "mitochondrial
matrix" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0051106 "positive regulation of DNA ligation"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0006268 "DNA unwinding involved in replication"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0048471
GO:GO:0005759 GO:GO:0003684 GO:GO:0016605 GO:GO:0051260
GO:GO:0003690 GO:GO:0003697 GO:GO:0000724 SUPFAM:SSF47794
GO:GO:0000800 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268
KO:K04482 GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 EMBL:BC105458
IPI:IPI00686332 RefSeq:NP_001039644.1 UniGene:Bt.36197 HSSP:O73948
ProteinModelPortal:Q2KJ94 SMR:Q2KJ94 STRING:Q2KJ94 PRIDE:Q2KJ94
Ensembl:ENSBTAT00000003788 GeneID:514749 KEGG:bta:514749 CTD:5888
InParanoid:Q2KJ94 OrthoDB:EOG47H5QB NextBio:20871491 Uniprot:Q2KJ94
Length = 339
Score = 135 (52.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 33/77 (42%), Positives = 45/77 (58%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + Q E + +ITT +LD +L GGI +TE+ G GKTQ+ LAV
Sbjct: 85 GFTTATEFHQRRSE-IIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVT 143
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+P++ GG GKA+YI
Sbjct: 144 CQLPIDRGGGEGKAMYI 160
>UNIPROTKB|Q8MKI8 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9615 "Canis lupus familiaris" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0006268 "DNA
unwinding involved in replication" evidence=ISS] [GO:0007126
"meiosis" evidence=ISS] [GO:0000794 "condensed nuclear chromosome"
evidence=ISS] [GO:0000793 "condensed chromosome" evidence=ISS]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0051106 "positive
regulation of DNA ligation" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0016605
"PML body" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0007126 GO:GO:0048471 GO:GO:0005759
GO:GO:0003684 GO:GO:0016605 GO:GO:0051260 GO:GO:0003690
GO:GO:0003697 GO:GO:0000724 GO:GO:0000794 SUPFAM:SSF47794
GO:GO:0000800 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268
KO:K04482 GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:AB043896 RefSeq:NP_001003043.1
UniGene:Cfa.85 ProteinModelPortal:Q8MKI8 SMR:Q8MKI8 STRING:Q8MKI8
Ensembl:ENSCAFT00000014658 GeneID:403568 KEGG:cfa:403568
InParanoid:Q8MKI8 NextBio:20817076 Uniprot:Q8MKI8
Length = 339
Score = 135 (52.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 33/77 (42%), Positives = 45/77 (58%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + Q E + +ITT +LD +L GGI +TE+ G GKTQ+ LAV
Sbjct: 85 GFTTATEFHQRRSE-IIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVT 143
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+P++ GG GKA+YI
Sbjct: 144 CQLPIDRGGGEGKAMYI 160
>UNIPROTKB|Q06609 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=TAS] [GO:0000794 "condensed nuclear
chromosome" evidence=ISS] [GO:0007126 "meiosis" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IDA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IDA;TAS] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0006268 "DNA unwinding involved in replication" evidence=IDA]
[GO:0003697 "single-stranded DNA binding" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0051106 "positive
regulation of DNA ligation" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0016605 "PML body" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006312 "mitotic recombination" evidence=TAS] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0005524 "ATP
binding" evidence=IDA] [GO:0000730 "DNA recombinase assembly"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281
"DNA repair" evidence=TAS] [GO:0006302 "double-strand break repair"
evidence=TAS] [GO:0042802 "identical protein binding" evidence=IPI]
Reactome:REACT_216 InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0005759 GO:GO:0003684 GO:GO:0016605
GO:GO:0051260 Reactome:REACT_111183 GO:GO:0003690 GO:GO:0003697
GO:GO:0000794 MIM:114480 GO:GO:0006312
Pathway_Interaction_DB:bard1pathway GO:GO:0007131 Orphanet:145
SUPFAM:SSF47794 GO:GO:0000800 PDB:1N0W PDBsum:1N0W EMBL:AC022405
EMBL:CH471125 EMBL:AC012476 Orphanet:238722 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142
GO:GO:0006268 KO:K04482 GO:GO:0051106 GO:GO:0000730 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:D13804 EMBL:D14134 EMBL:AF165094
EMBL:AF165088 EMBL:AF165089 EMBL:AF165090 EMBL:AF165091
EMBL:AF165092 EMBL:AF165093 EMBL:AF233744 EMBL:AF233740
EMBL:AF233741 EMBL:AF233742 EMBL:AF236021 EMBL:AF233743
EMBL:EU362635 EMBL:AY196785 EMBL:AK131299 EMBL:AK291969
EMBL:AK313503 EMBL:CR536559 EMBL:BC001459 IPI:IPI00032201
IPI:IPI00220649 IPI:IPI00553199 IPI:IPI01010370 PIR:I58295
RefSeq:NP_001157741.1 RefSeq:NP_001157742.1 RefSeq:NP_002866.2
RefSeq:NP_597994.3 UniGene:Hs.631709 PDB:1B22 PDBsum:1B22
ProteinModelPortal:Q06609 SMR:Q06609 DIP:DIP-462N IntAct:Q06609
MINT:MINT-1374477 STRING:Q06609 PhosphoSite:Q06609 DMDM:548663
PaxDb:Q06609 PRIDE:Q06609 DNASU:5888 Ensembl:ENST00000267868
Ensembl:ENST00000382643 Ensembl:ENST00000423169
Ensembl:ENST00000532743 Ensembl:ENST00000557850 GeneID:5888
KEGG:hsa:5888 UCSC:uc001zmi.4 UCSC:uc010bbw.3 GeneCards:GC15P040987
HGNC:HGNC:9817 HPA:CAB010381 MIM:179617 MIM:614508
neXtProt:NX_Q06609 PharmGKB:PA34176 PhylomeDB:Q06609
BindingDB:Q06609 ChiTaRS:RAD51 EvolutionaryTrace:Q06609
GenomeRNAi:5888 NextBio:22896 PMAP-CutDB:Q06609 ArrayExpress:Q06609
Bgee:Q06609 CleanEx:HS_RAD51 Genevestigator:Q06609
GermOnline:ENSG00000051180 Uniprot:Q06609
Length = 339
Score = 135 (52.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 33/77 (42%), Positives = 45/77 (58%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + Q E + +ITT +LD +L GGI +TE+ G GKTQ+ LAV
Sbjct: 85 GFTTATEFHQRRSE-IIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVT 143
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+P++ GG GKA+YI
Sbjct: 144 CQLPIDRGGGEGKAMYI 160
>UNIPROTKB|B0M1M6 [details] [associations]
symbol:pigRAD51 "Rad51" species:9823 "Sus scrofa"
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051106
"positive regulation of DNA ligation" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0016605
"PML body" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0006268 "DNA
unwinding involved in replication" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0007126 GO:GO:0048471
GO:GO:0003684 GO:GO:0016605 GO:GO:0051260 GO:GO:0003690
GO:GO:0003697 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0000800
eggNOG:COG0468 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268 KO:K04482
GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:CU633257 EMBL:EU302125 EMBL:AB355632
RefSeq:NP_001116653.1 UniGene:Ssc.22664 SMR:B0M1M6 STRING:B0M1M6
Ensembl:ENSSSCT00000005265 GeneID:100141309 KEGG:ssc:100141309
Uniprot:B0M1M6
Length = 339
Score = 135 (52.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 33/77 (42%), Positives = 45/77 (58%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + Q E + +ITT +LD +L GGI +TE+ G GKTQ+ LAV
Sbjct: 85 GFTTATEFHQRRSE-IIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVT 143
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+P++ GG GKA+YI
Sbjct: 144 CQLPIDRGGGEGKAMYI 160
>UNIPROTKB|O77507 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9986 "Oryctolagus cuniculus" [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006268 "DNA unwinding
involved in replication" evidence=ISS] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0005759 GO:GO:0003684
GO:GO:0006281 GO:GO:0006310 GO:GO:0003690 SUPFAM:SSF47794
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0006268
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:AF017729 RefSeq:NP_001075493.1
UniGene:Ocu.2212 ProteinModelPortal:O77507 SMR:O77507 STRING:O77507
GeneID:100008661 Uniprot:O77507
Length = 339
Score = 135 (52.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 33/77 (42%), Positives = 45/77 (58%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + Q E + +ITT +LD +L GGI +TE+ G GKTQ+ LAV
Sbjct: 85 GFTTATEFHQRRSE-IIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVT 143
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+P++ GG GKA+YI
Sbjct: 144 CQLPIDRGGGEGKAMYI 160
>UNIPROTKB|P70099 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:10029 "Cricetulus griseus" [GO:0000793 "condensed
chromosome" evidence=ISS] [GO:0000794 "condensed nuclear
chromosome" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006268 "DNA unwinding
involved in replication" evidence=ISS] [GO:0007126 "meiosis"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0007126 GO:GO:0048471
GO:GO:0005759 GO:GO:0003684 GO:GO:0006281 GO:GO:0006310
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
HOVERGEN:HBG001504 GO:GO:0006268 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 CTD:5888 EMBL:Y08202 RefSeq:NP_001233686.1
ProteinModelPortal:P70099 SMR:P70099 GeneID:100689324
Uniprot:P70099
Length = 339
Score = 135 (52.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 33/77 (42%), Positives = 45/77 (58%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + Q E + +ITT +LD +L GGI +TE+ G GKTQ+ LAV
Sbjct: 85 GFTTATEFHQRRSE-IIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVT 143
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+P++ GG GKA+YI
Sbjct: 144 CQLPIDRGGGEGKAMYI 160
>MGI|MGI:97890 [details] [associations]
symbol:Rad51 "RAD51 homolog" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISO;IDA;IMP] [GO:0000793 "condensed chromosome"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0000795 "synaptonemal complex" evidence=TAS]
[GO:0000800 "lateral element" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0006268 "DNA unwinding involved in replication"
evidence=ISO] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=TAS] [GO:0007126 "meiosis" evidence=IDA]
[GO:0007131 "reciprocal meiotic recombination" evidence=TAS]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016605 "PML
body" evidence=ISO] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] [GO:0051106 "positive regulation of DNA
ligation" evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 MGI:MGI:97890 GO:GO:0005524 GO:GO:0048471
GO:GO:0005654 GO:GO:0005759 GO:GO:0003684 GO:GO:0016605
GO:GO:0051260 Reactome:REACT_120463 GO:GO:0003690 GO:GO:0003697
GO:GO:0000724 GO:GO:0007131 Reactome:REACT_27235 SUPFAM:SSF47794
GO:GO:0000800 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268
KO:K04482 GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:D13473 EMBL:D13803 EMBL:AK011242
EMBL:AK076468 EMBL:AK151157 EMBL:AK151177 EMBL:BC027384
IPI:IPI00118524 PIR:A48221 RefSeq:NP_035364.1 UniGene:Mm.330492
ProteinModelPortal:Q08297 SMR:Q08297 IntAct:Q08297 MINT:MINT-205669
STRING:Q08297 PhosphoSite:Q08297 PaxDb:Q08297 PRIDE:Q08297
Ensembl:ENSMUST00000028795 GeneID:19361 KEGG:mmu:19361
InParanoid:Q08297 NextBio:296421 Bgee:Q08297 CleanEx:MM_RAD51
Genevestigator:Q08297 GermOnline:ENSMUSG00000027323 Uniprot:Q08297
Length = 339
Score = 135 (52.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 33/77 (42%), Positives = 45/77 (58%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + Q E + +ITT +LD +L GGI +TE+ G GKTQ+ LAV
Sbjct: 85 GFTTATEFHQRRSE-IIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVT 143
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+P++ GG GKA+YI
Sbjct: 144 CQLPIDRGGGEGKAMYI 160
>TAIR|locus:2147092 [details] [associations]
symbol:RAD51 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010332 "response to gamma radiation" evidence=IEP;RCA]
[GO:0006302 "double-strand break repair" evidence=RCA;IMP]
[GO:0006259 "DNA metabolic process" evidence=IDA;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0005694 "chromosome" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0006261 "DNA-dependent
DNA replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007126 "meiosis" evidence=RCA] [GO:0009555
"pollen development" evidence=RCA] [GO:0010212 "response to
ionizing radiation" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016568 "chromatin modification"
evidence=RCA] [GO:0031047 "gene silencing by RNA" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA] [GO:0045003
"double-strand break repair via synthesis-dependent strand
annealing" evidence=IDA] [GO:0009314 "response to radiation"
evidence=NAS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163
SMART:SM00278 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0003684
GO:GO:0010332 EMBL:AF296834 GO:GO:0045003 SUPFAM:SSF47794
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 KO:K04482 EMBL:U43652 EMBL:AJ001100 EMBL:U43528
IPI:IPI00532326 RefSeq:NP_568402.1 UniGene:At.110
ProteinModelPortal:P94102 SMR:P94102 DIP:DIP-31780N IntAct:P94102
STRING:P94102 EnsemblPlants:AT5G20850.1 GeneID:832208
KEGG:ath:AT5G20850 GeneFarm:4757 TAIR:At5g20850 InParanoid:P94102
OMA:MMAESRY PhylomeDB:P94102 ProtClustDB:PLN03186
Genevestigator:P94102 GermOnline:AT5G20850 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 Uniprot:P94102
Length = 342
Score = 135 (52.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 37/115 (32%), Positives = 60/115 (52%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
T+ L +++ + +IT+ +LD +L GGI +TE+ G GKTQL L V Q+
Sbjct: 90 TSASQLHAQRQEIIQITSGSRELDKVLEGGIETGSITELYGEFRSGKTQLCHTLCVTCQL 149
Query: 101 PVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRH 155
P++ GG GKA+YI G + Q ++ D+F DV + + A++ H
Sbjct: 150 PMDQGGGEGKAMYID-AEGTFRPQR-LLQIADRFGLNGADVLENVAYARAYNTDH 202
>ASPGD|ASPL0000057020 [details] [associations]
symbol:uvsC species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IMP] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0006312 "mitotic recombination" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0006311 "meiotic gene conversion"
evidence=IEA] [GO:0000711 "meiotic DNA repair synthesis"
evidence=IEA] [GO:0007533 "mating type switching" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0030998 "linear element" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0003691 "double-stranded telomeric DNA binding" evidence=IEA]
[GO:0000150 "recombinase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0043047 "single-stranded telomeric DNA
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 GO:GO:0003684 GO:GO:0006281 SUPFAM:SSF47794
GO:GO:0008094 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 ProteinModelPortal:C8VSQ3
SMR:C8VSQ3 EnsemblFungi:CADANIAT00001386 Uniprot:C8VSQ3
Length = 348
Score = 135 (52.6 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 34/77 (44%), Positives = 42/77 (54%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA +M E L ITT LD +LGGGI +TEI G GK+Q+ LAV
Sbjct: 86 GFTTATEMHARRSE-LISITTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVT 144
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+P + GG GK +YI
Sbjct: 145 CQLPFDMGGGEGKCLYI 161
>ASPGD|ASPL0000051939 [details] [associations]
symbol:AN10145 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0033062 "Rhp55-Rhp57 complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0000722 "telomere maintenance via recombination" evidence=IEA]
[GO:0030491 "heteroduplex formation" evidence=IEA] [GO:0000707
"meiotic DNA recombinase assembly" evidence=IEA] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 ProteinModelPortal:C8VTV7
EnsemblFungi:CADANIAT00001591 OMA:ILSINAM Uniprot:C8VTV7
Length = 554
Score = 110 (43.8 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 33/83 (39%), Positives = 41/83 (49%)
Query: 56 ITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGGKAIYIG 115
I+T A LD +L GGI VTE+ G G GKTQ + L + VQ+P G G AIYI
Sbjct: 105 ISTLDAALDTLLNGGIATGYVTEVTGESGSGKTQFLLGLLLAVQLPPPQGA-GRSAIYIS 163
Query: 116 KCLGFYTEQSAVINYLDKFVSEH 138
TE N L + + H
Sbjct: 164 ------TEAPLATNRLSQLIECH 180
Score = 69 (29.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 24/92 (26%), Positives = 43/92 (46%)
Query: 124 QSAVINYLDKFVSEHKDVKVVIIDSIAFHFR-----HGFVDLALRTRVLSGIALKLMNLA 178
Q ++NY + +V +V+IDSI ++R H L+ R+ L+ + L NLA
Sbjct: 208 QDHILNYQLPVAIKRYNVGLVVIDSITSNYRAEHTSHDLSGLSTRSGELAKLGQMLRNLA 267
Query: 179 KKFSLALLEPNLATTANLAESCLTCLRDSGSR 210
+A++ N + ++ L R +G R
Sbjct: 268 ASEDVAIVVANQVSDRFEGDAPLPFSRVTGDR 299
>UNIPROTKB|Q50LF6 [details] [associations]
symbol:tilDmc1 "RecA homolog Dmc1" species:8128
"Oreochromis niloticus" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504 GO:GO:0000150
EMBL:AERX01002235 EMBL:AB182646 RefSeq:XP_003438754.1
UniGene:Oni.44877 SMR:Q50LF6 Ensembl:ENSONIT00000024880
GeneID:100534532 Uniprot:Q50LF6
Length = 342
Score = 133 (51.9 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 38/118 (32%), Positives = 58/118 (49%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G QTA++ ++ + +TT + D +LGGG+ +TE G GKTQL L V
Sbjct: 86 GFQTAFEY-SARRKQVFHVTTGSQEFDKLLGGGVESMAITEAFGEFRTGKTQLSHTLCVT 144
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRH 155
Q+P E G GGK I+I F ++ I D+F +H V ++ + A+ H
Sbjct: 145 AQLPGEDGYSGGKVIFIDTENTFRPDRLRDI--ADRFNVDHDAVLDNVLYARAYTSEH 200
>SGD|S000000897 [details] [associations]
symbol:RAD51 "Strand exchange protein" species:4932
"Saccharomyces cerevisiae" [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000722 "telomere maintenance via
recombination" evidence=IMP] [GO:0045002 "double-strand break
repair via single-strand annealing" evidence=IMP] [GO:0030491
"heteroduplex formation" evidence=IDA] [GO:0000709 "meiotic joint
molecule formation" evidence=IMP] [GO:0000150 "recombinase
activity" evidence=IDA] [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0042148 "strand invasion" evidence=IDA]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
SGD:S000000897 GO:GO:0005524 GO:GO:0003684 EMBL:BK006939
GO:GO:0003697 GO:GO:0000724 GO:GO:0000794 EMBL:U18839 GO:GO:0000722
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 GO:GO:0000709 RefSeq:NP_011021.3
GeneID:856831 KEGG:sce:YER095W KO:K04482 EMBL:M88470
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 OrthoDB:EOG41CB4Z GO:GO:0042148 EMBL:X64270
EMBL:D10023 PIR:A44348 RefSeq:NP_011026.3 PDB:1SZP PDB:3LDA
PDBsum:1SZP PDBsum:3LDA ProteinModelPortal:P25454 SMR:P25454
DIP:DIP-195N IntAct:P25454 MINT:MINT-386096 STRING:P25454
PaxDb:P25454 PeptideAtlas:P25454 EnsemblFungi:YER095W GeneID:856837
KEGG:sce:YER100W CYGD:YER095w KO:K04554 EvolutionaryTrace:P25454
NextBio:983130 Genevestigator:P25454 GermOnline:YER095W
GO:GO:0030491 Uniprot:P25454
Length = 400
Score = 133 (51.9 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 32/77 (41%), Positives = 43/77 (55%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA D E + +TT +LD +LGGG+ +TE+ G GK+QL LAV
Sbjct: 143 GFVTAADFHMRRSELIC-LTTGSKNLDTLLGGGVETGSITELFGEFRTGKSQLCHTLAVT 201
Query: 98 VQIPVEFGGLGGKAIYI 114
QIP++ GG GK +YI
Sbjct: 202 CQIPLDIGGGEGKCLYI 218
>ZFIN|ZDB-GENE-040426-2286 [details] [associations]
symbol:rad51 "RAD51 homolog (RecA homolog, E.
coli) (S. cerevisiae)" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0051597 "response to methylmercury" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382
ZFIN:ZDB-GENE-040426-2286 GO:GO:0005524 GO:GO:0046686 GO:GO:0003684
GO:GO:0006281 GO:GO:0051597 SUPFAM:SSF47794 GO:GO:0008094
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 HOVERGEN:HBG001504 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 CTD:5888 EMBL:BX936455 IPI:IPI00496483
RefSeq:NP_998371.2 UniGene:Dr.1514 SMR:Q5TYR1
Ensembl:ENSDART00000060706 GeneID:406487 KEGG:dre:406487
InParanoid:Q5TYR1 NextBio:20818074 Uniprot:Q5TYR1
Length = 340
Score = 132 (51.5 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 33/77 (42%), Positives = 45/77 (58%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + Q E + +I+T +LD +L GGI +TE+ G GKTQL LAV
Sbjct: 86 GFTTATEFHQRRAE-IIQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVT 144
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+P++ GG GKA+YI
Sbjct: 145 CQLPIDQGGGEGKAMYI 161
>UNIPROTKB|Q9DGC3 [details] [associations]
symbol:Dmc1 "DMC1" species:8330 "Cynops pyrrhogaster"
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238
HOVERGEN:HBG001504 GO:GO:0000150 HSSP:Q06609 EMBL:AB041944
ProteinModelPortal:Q9DGC3 SMR:Q9DGC3 Uniprot:Q9DGC3
Length = 342
Score = 132 (51.5 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 46/154 (29%), Positives = 72/154 (46%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA++ E+++ + ITT + D +LGGGI +TE G GKTQL L V
Sbjct: 86 GFLTAFEY-SEKRKMVFHITTGSQEFDKLLGGGIESMAITETFGEFRTGKTQLSHTLCVT 144
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGF 157
Q+P G GGK I+I F ++ I D+F +H V ++ + A+ H
Sbjct: 145 AQLPGTDGYTGGKVIFIDTENTFRPDRLRDI--ADRFSVDHDAVLDNVLYARAYTSEH-- 200
Query: 158 VDLALRTRVLSGIALKLMNLAKKFSLALLEPNLA 191
+ +L +A K A F L +++ +A
Sbjct: 201 -----QMELLDYVAAKFHEEAGIFKLLVIDSIMA 229
>UNIPROTKB|Q4WAR2 [details] [associations]
symbol:AFUA_7G02200 "Meiotic recombination protein (Dmc1),
putative" species:330879 "Aspergillus fumigatus Af293" [GO:0000150
"recombinase activity" evidence=ISS] [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0003697 "single-stranded DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094
HOGENOM:HOG000227426 KO:K10872 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
EMBL:AAHF01000015 RefSeq:XP_746712.1 ProteinModelPortal:Q4WAR2
STRING:Q4WAR2 EnsemblFungi:CADAFUAT00001154 GeneID:3504290
KEGG:afm:AFUA_7G02200 OMA:HAASTRI Uniprot:Q4WAR2
Length = 338
Score = 131 (51.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 41/138 (29%), Positives = 66/138 (47%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + L +++ + +I+T D+ILGGG ++E+ G GKTQL ++V
Sbjct: 82 GFITAME-LSHQRKRVVKISTGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMSVV 140
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGF 157
Q+P E GG GK YI F E+ A I ++F + + I + A + H
Sbjct: 141 AQLPKEMGGADGKVAYIDTEGTFRPERIAQI--AERFSVDPDSAQENIAYARALNSEHQL 198
Query: 158 VDLALRTRVLSGIALKLM 175
L +R +G +L+
Sbjct: 199 ELLNTLSREFAGGEYRLL 216
>UNIPROTKB|F1NI95 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0001541 "ovarian follicle development" evidence=IEA]
[GO:0001556 "oocyte maturation" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0003677 GO:GO:0000794 GO:GO:0000781 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239 GO:GO:0008094
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
EMBL:AADN02006146 IPI:IPI00578251 Ensembl:ENSGALT00000019979
Uniprot:F1NI95
Length = 346
Score = 131 (51.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 46/154 (29%), Positives = 72/154 (46%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA++ E+++ + ITT + D +LGGGI +TE G GKTQL L V
Sbjct: 90 GFLTAFEY-SEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVT 148
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGF 157
Q+P G GGK I+I F ++ I D+F +H V ++ + A+ H
Sbjct: 149 AQLPGPKGYTGGKIIFIDTENTFRPDRLRDI--ADRFNVDHDAVLDNVLYARAYTSEH-- 204
Query: 158 VDLALRTRVLSGIALKLMNLAKKFSLALLEPNLA 191
+ +L +A K A F L +++ +A
Sbjct: 205 -----QMELLDYVAAKFHEEAGIFKLLIIDSIMA 233
>UNIPROTKB|G3V399 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 EMBL:AL049840 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 HGNC:HGNC:12830
ProteinModelPortal:G3V399 SMR:G3V399 Ensembl:ENST00000553361
ArrayExpress:G3V399 Bgee:G3V399 Uniprot:G3V399
Length = 150
Score = 112 (44.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 55 RITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGL 107
R++ C LD +L GG+ +TE+ G GKTQL +QL + VQ P + GGL
Sbjct: 81 RLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGL 133
>UNIPROTKB|E2RK50 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144
GeneTree:ENSGT00550000075091 EMBL:AAEX03007314 RefSeq:XP_849984.1
ProteinModelPortal:E2RK50 Ensembl:ENSCAFT00000002150 GeneID:608268
KEGG:cfa:608268 NextBio:20893933 Uniprot:E2RK50
Length = 340
Score = 130 (50.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 46/154 (29%), Positives = 72/154 (46%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA++ E+++ + ITT + D +LGGGI +TE G GKTQL L V
Sbjct: 84 GFLTAFEY-SEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVT 142
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGF 157
Q+P G GGK I+I F ++ I D+F +H V ++ + A+ H
Sbjct: 143 AQLPGAGGYSGGKIIFIDTENTFRPDRLRDI--ADRFNVDHDAVLDNVLYARAYTSEH-- 198
Query: 158 VDLALRTRVLSGIALKLMNLAKKFSLALLEPNLA 191
+ +L +A K A F L +++ +A
Sbjct: 199 -----QMELLDYVAAKFHEEAGIFKLLIIDSIMA 227
>UNIPROTKB|F1SKQ1 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144
GeneTree:ENSGT00550000075091 EMBL:FP102457 RefSeq:XP_003126070.1
Ensembl:ENSSSCT00000000109 GeneID:100522866 KEGG:ssc:100522866
Uniprot:F1SKQ1
Length = 340
Score = 130 (50.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 46/154 (29%), Positives = 72/154 (46%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA++ E+++ + ITT + D +LGGGI +TE G GKTQL L V
Sbjct: 84 GFLTAFEY-SEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVT 142
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGF 157
Q+P G GGK I+I F ++ I D+F +H V ++ + A+ H
Sbjct: 143 AQLPGAGGYSGGKIIFIDTENTFRPDRLRDI--ADRFNVDHDAVLDNVLYARAYTSEH-- 198
Query: 158 VDLALRTRVLSGIALKLMNLAKKFSLALLEPNLA 191
+ +L +A K A F L +++ +A
Sbjct: 199 -----QMELLDYVAAKFHEEAGIFKLLIIDSIMA 227
>UNIPROTKB|Q9C0P6 [details] [associations]
symbol:dmc1 "Putative DMC1 protein" species:5322 "Pleurotus
ostreatus" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150 HSSP:Q06609
EMBL:AJ311528 EMBL:AJ308557 ProteinModelPortal:Q9C0P6
Uniprot:Q9C0P6
Length = 347
Score = 130 (50.8 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 46 LQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFG 105
+QE+++ + I+T ++D ILGGGI + V+E+ G GKTQL ++V Q+P + G
Sbjct: 100 IQEKRKRVNTISTGSKNVDVILGGGIMSQSVSEVYGEFRTGKTQLAHTMSVVAQLPPDLG 159
Query: 106 GLGGKAIYI 114
G GK YI
Sbjct: 160 GASGKVAYI 168
>CGD|CAL0001214 [details] [associations]
symbol:RAD51 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0030998 "linear
element" evidence=IEA] [GO:0003691 "double-stranded telomeric DNA
binding" evidence=IEA] [GO:0000150 "recombinase activity"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0006311 "meiotic gene conversion" evidence=IEA] [GO:0000722
"telomere maintenance via recombination" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0042148 "strand
invasion" evidence=IEA] [GO:0000709 "meiotic joint molecule
formation" evidence=IEA] [GO:0030491 "heteroduplex formation"
evidence=IEA] [GO:0007533 "mating type switching" evidence=IEA]
[GO:0000711 "meiotic DNA repair synthesis" evidence=IEA]
[GO:0006200 "ATP catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 CGD:CAL0001214 GO:GO:0005524
GO:GO:0003684 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0044182
GO:GO:0008094 GO:GO:1900429 GO:GO:0036166 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482 EMBL:AACQ01000127
EMBL:AACQ01000126 PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239
RefSeq:XP_713440.1 RefSeq:XP_713476.1 ProteinModelPortal:Q59UY8
SMR:Q59UY8 STRING:Q59UY8 GeneID:3644908 GeneID:3644944
KEGG:cal:CaO19.11236 KEGG:cal:CaO19.3752 Uniprot:Q59UY8
Length = 361
Score = 130 (50.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 30/77 (38%), Positives = 42/77 (54%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + E + +TT LD +LGGG+ +TE+ G GK+QL LAV
Sbjct: 102 GFTTASEFHSRRSELIC-LTTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHTLAVT 160
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+P++ GG GK +YI
Sbjct: 161 CQLPIDMGGGEGKCLYI 177
>UNIPROTKB|Q59UY8 [details] [associations]
symbol:RAD51 "Putative uncharacterized protein RAD51"
species:237561 "Candida albicans SC5314" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 CGD:CAL0001214 GO:GO:0005524
GO:GO:0003684 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0044182
GO:GO:0008094 GO:GO:1900429 GO:GO:0036166 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482 EMBL:AACQ01000127
EMBL:AACQ01000126 PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239
RefSeq:XP_713440.1 RefSeq:XP_713476.1 ProteinModelPortal:Q59UY8
SMR:Q59UY8 STRING:Q59UY8 GeneID:3644908 GeneID:3644944
KEGG:cal:CaO19.11236 KEGG:cal:CaO19.3752 Uniprot:Q59UY8
Length = 361
Score = 130 (50.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 30/77 (38%), Positives = 42/77 (54%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA + E + +TT LD +LGGG+ +TE+ G GK+QL LAV
Sbjct: 102 GFTTASEFHSRRSELIC-LTTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHTLAVT 160
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+P++ GG GK +YI
Sbjct: 161 CQLPIDMGGGEGKCLYI 177
>UNIPROTKB|Q6BP40 [details] [associations]
symbol:DEHA2E16742g "DEHA2E16742p" species:284592
"Debaryomyces hansenii CBS767" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0016887 GO:GO:0003690 GO:GO:0003697
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094 EMBL:CR382137
GenomeReviews:CR382137_GR HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 RefSeq:XP_460030.2 ProteinModelPortal:Q6BP40
STRING:Q6BP40 GeneID:2902232 KEGG:dha:DEHA2E16742g Uniprot:Q6BP40
Length = 330
Score = 129 (50.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 30/70 (42%), Positives = 39/70 (55%)
Query: 46 LQEEQESLA-RITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEF 104
+Q E S A ++T LD++LGGG+ +TE+ G GKTQL L V Q+P E
Sbjct: 82 VQAELRSRAFTLSTGSKQLDDVLGGGVSSMSITEVFGEFRCGKTQLCHTLCVTAQLPKEM 141
Query: 105 GGLGGKAIYI 114
GG GK YI
Sbjct: 142 GGSEGKVAYI 151
>UNIPROTKB|Q14565 [details] [associations]
symbol:DMC1 "Meiotic recombination protein DMC1/LIM15
homolog" species:9606 "Homo sapiens" [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000794 "condensed nuclear chromosome"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0001556 "oocyte maturation" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005694 "chromosome" evidence=ISS] [GO:0007126
"meiosis" evidence=TAS] [GO:0007292 "female gamete generation"
evidence=TAS] [GO:0007283 "spermatogenesis" evidence=TAS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0007286
GO:GO:0003677 GO:GO:0007283 Reactome:REACT_111183 GO:GO:0001541
GO:GO:0000794 GO:GO:0001556 GO:GO:0000781 GO:GO:0007292
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:D63882 EMBL:D64108
EMBL:CR456486 EMBL:AK292617 EMBL:AY520538 EMBL:AL022320
EMBL:BC125163 EMBL:BC125164 IPI:IPI00031512 PIR:S62354
RefSeq:NP_008999.2 UniGene:Hs.339396 PDB:1V5W PDB:2ZJB PDBsum:1V5W
PDBsum:2ZJB ProteinModelPortal:Q14565 SMR:Q14565 DIP:DIP-24192N
IntAct:Q14565 MINT:MINT-3029876 STRING:Q14565 PhosphoSite:Q14565
DMDM:13878923 PaxDb:Q14565 PRIDE:Q14565 DNASU:11144
Ensembl:ENST00000216024 GeneID:11144 KEGG:hsa:11144 UCSC:uc003avz.1
CTD:11144 GeneCards:GC22M038914 HGNC:HGNC:2927 HPA:CAB015397
HPA:HPA001232 MIM:602721 neXtProt:NX_Q14565 PharmGKB:PA27377
HOVERGEN:HBG001504 InParanoid:Q14565 OrthoDB:EOG4F7NKC
PhylomeDB:Q14565 EvolutionaryTrace:Q14565 GenomeRNAi:11144
NextBio:42364 ArrayExpress:Q14565 Bgee:Q14565 CleanEx:HS_DMC1
Genevestigator:Q14565 GermOnline:ENSG00000100206 Uniprot:Q14565
Length = 340
Score = 129 (50.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 46/154 (29%), Positives = 72/154 (46%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA++ E+++ + ITT + D +LGGGI +TE G GKTQL L V
Sbjct: 84 GFLTAFEY-SEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVT 142
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGF 157
Q+P G GGK I+I F ++ I D+F +H V ++ + A+ H
Sbjct: 143 AQLPGAGGYPGGKIIFIDTENTFRPDRLRDI--ADRFNVDHDAVLDNVLYARAYTSEH-- 198
Query: 158 VDLALRTRVLSGIALKLMNLAKKFSLALLEPNLA 191
+ +L +A K A F L +++ +A
Sbjct: 199 -----QMELLDYVAAKFHEEAGIFKLLIIDSIMA 227
>MGI|MGI:105393 [details] [associations]
symbol:Dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IDA]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0001541 "ovarian follicle development" evidence=IMP]
[GO:0001556 "oocyte maturation" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007129
"synapsis" evidence=IMP] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IMP] [GO:0007276 "gamete generation" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007286 "spermatid
development" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 MGI:MGI:105393 GO:GO:0005524 GO:GO:0005654
GO:GO:0007286 GO:GO:0006281 GO:GO:0016887 Reactome:REACT_120463
GO:GO:0003690 GO:GO:0003697 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 Reactome:REACT_27235
SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239 GO:GO:0008094
eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504
EMBL:D58419 EMBL:D64107 IPI:IPI00126394 PIR:JC4191
RefSeq:NP_034189.1 UniGene:Mm.2524 ProteinModelPortal:Q61880
SMR:Q61880 STRING:Q61880 PhosphoSite:Q61880 PRIDE:Q61880
Ensembl:ENSMUST00000023065 GeneID:13404 KEGG:mmu:13404
GeneTree:ENSGT00550000075091 InParanoid:Q61880 NextBio:283799
Bgee:Q61880 Genevestigator:Q61880 GermOnline:ENSMUSG00000022429
GO:GO:0000150 Uniprot:Q61880
Length = 340
Score = 129 (50.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 46/154 (29%), Positives = 71/154 (46%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA+ E ++ + ITT + D +LGGGI +TE G GKTQL L V
Sbjct: 84 GFLTAFQY-SERRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVT 142
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGF 157
Q+P G GGK I+I F ++ I D+F +H+ V ++ + A+ H
Sbjct: 143 AQLPGTGGYSGGKIIFIDTENTFRPDRLRDI--ADRFNVDHEAVLDNVLYARAYTSEH-- 198
Query: 158 VDLALRTRVLSGIALKLMNLAKKFSLALLEPNLA 191
+ +L +A K A F L +++ +A
Sbjct: 199 -----QMELLDYVAAKFHEEAGIFKLLIIDSIMA 227
>FB|FBgn0003479 [details] [associations]
symbol:spn-A "spindle A" species:7227 "Drosophila
melanogaster" [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0048477 "oogenesis"
evidence=IMP;TAS] [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0009951 "polarity specification of
dorsal/ventral axis" evidence=IMP] [GO:0030717 "karyosome
formation" evidence=IMP] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;NAS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0009994 "oocyte differentiation" evidence=NAS]
[GO:0000075 "cell cycle checkpoint" evidence=IMP] [GO:0007143
"female meiosis" evidence=IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0045003 "double-strand break repair via synthesis-dependent
strand annealing" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0009949 GO:GO:0007294 GO:GO:0003684 GO:GO:0007143
GO:GO:0008298 GO:GO:0030717 GO:GO:0000075 GO:GO:0045003
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:D37788 EMBL:D17726 EMBL:L41342
EMBL:BT001791 RefSeq:NP_524583.1 RefSeq:NP_733342.1 UniGene:Dm.1913
ProteinModelPortal:Q27297 SMR:Q27297 DIP:DIP-20846N IntAct:Q27297
MINT:MINT-337614 STRING:Q27297 PaxDb:Q27297 PRIDE:Q27297
EnsemblMetazoa:FBtr0085589 GeneID:43577 KEGG:dme:Dmel_CG7948
CTD:43577 FlyBase:FBgn0003479 InParanoid:Q27297 OrthoDB:EOG4P2NHW
PhylomeDB:Q27297 GenomeRNAi:43577 NextBio:834653 Bgee:Q27297
GermOnline:CG7948 GO:GO:0009951 Uniprot:Q27297
Length = 336
Score = 127 (49.8 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 37/103 (35%), Positives = 55/103 (53%)
Query: 53 LARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGGKAI 112
+ +++T +LD +LGGGI +TEI G GKTQL LAV Q+P+ G GK +
Sbjct: 96 VVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCM 155
Query: 113 YIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRH 155
YI F E+ A I K ++E + ++D++AF H
Sbjct: 156 YIDTENTFRPERLAAIAQRYK-LNESE-----VLDNVAFTRAH 192
>RGD|1307611 [details] [associations]
symbol:Dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination (yeast)" species:10116
"Rattus norvegicus" [GO:0000239 "pachytene" evidence=IEA;ISO]
[GO:0000781 "chromosome, telomeric region" evidence=IEA;ISO]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA;ISO]
[GO:0001541 "ovarian follicle development" evidence=IEA;ISO]
[GO:0001556 "oocyte maturation" evidence=IEA;ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005694 "chromosome" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA;ISO]
[GO:0007276 "gamete generation" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0007286 "spermatid development"
evidence=IEA;ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 RGD:1307611 GO:GO:0005524 GO:GO:0007286 GO:GO:0003677
GO:GO:0006281 GO:GO:0001541 GO:GO:0000794 GO:GO:0001556
GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0007141
GO:GO:0000239 EMBL:CH473950 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 OrthoDB:EOG4F7NKC
GeneTree:ENSGT00550000075091 IPI:IPI00366298 RefSeq:NP_001124039.1
UniGene:Rn.45495 Ensembl:ENSRNOT00000018526 GeneID:362960
KEGG:rno:362960 UCSC:RGD:1307611 NextBio:681931 Uniprot:D3ZJ85
Length = 340
Score = 127 (49.8 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 46/154 (29%), Positives = 71/154 (46%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA+ E+++ + ITT + D +LGGGI +TE G GKTQL L V
Sbjct: 84 GFLTAFQY-SEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVT 142
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGF 157
Q+P G GGK I+I F ++ I D+F +H V ++ + A+ H
Sbjct: 143 AQLPGADGYSGGKIIFIDTENTFRPDRLRDI--ADRFNVDHDAVLDNVLYARAYTSEH-- 198
Query: 158 VDLALRTRVLSGIALKLMNLAKKFSLALLEPNLA 191
+ +L +A K A F L +++ +A
Sbjct: 199 -----QMELLDYVAAKFHEEAGIFKLLIVDSIMA 227
>POMBASE|SPAC20H4.07 [details] [associations]
symbol:rad57 "RecA family ATPase Rad57/Rhp57"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IGI]
[GO:0000730 "DNA recombinase assembly" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0033062 "Rhp55-Rhp57 complex" evidence=NAS]
[GO:0033170 "protein-DNA loading ATPase activity" evidence=TAS]
[GO:0042148 "strand invasion" evidence=TAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] InterPro:IPR020588
PROSITE:PS50162 PomBase:SPAC20H4.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0007131
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000730 GO:GO:0033170 GO:GO:0042148
GO:GO:0033062 EMBL:AB024744 PIR:T43507 RefSeq:NP_593627.1
ProteinModelPortal:Q9UUL2 IntAct:Q9UUL2 STRING:Q9UUL2
EnsemblFungi:SPAC20H4.07.1 GeneID:2542007 KEGG:spo:SPAC20H4.07
KO:K10958 OMA:LERRTHC OrthoDB:EOG4HTD1G NextBio:20803087
Uniprot:Q9UUL2
Length = 354
Score = 124 (48.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 56 ITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGGKAIYIG 115
+TT LD L GGI ++TEI G G GK+Q +QL + VQ+P+ GG+ A++I
Sbjct: 75 LTTGDVKLDETLHGGIPVGQLTEICGESGSGKSQFCMQLCLMVQLPLSLGGMNKAAVFIS 134
Query: 116 KCLGFYTEQS-AVINYL-DKFV-SEHKDV 141
G T++ + YL +++ ++ KD+
Sbjct: 135 TESGLETKRLFELARYLPERYPKADKKDI 163
>UNIPROTKB|F1N1D2 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
EMBL:DAAA02014664 IPI:IPI00691200 Ensembl:ENSBTAT00000007794
Uniprot:F1N1D2
Length = 339
Score = 122 (48.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 45/154 (29%), Positives = 71/154 (46%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G TA++ E+++ + ITT + D +LGGGI +TE G GKTQL L V
Sbjct: 84 GFLTAFEY-SEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVT 142
Query: 98 VQIPVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGF 157
Q+P GG G I+I F ++ I D+F +H V ++ + A+ H
Sbjct: 143 AQLPGA-GGYSGGIIFIDTENTFRPDRLRDI--ADRFNVDHNAVLDNVLYARAYTSEH-- 197
Query: 158 VDLALRTRVLSGIALKLMNLAKKFSLALLEPNLA 191
+ +L +A K A F L +++ +A
Sbjct: 198 -----QMELLDYVAAKFHEEAGIFKLLIIDSIMA 226
>UNIPROTKB|E2RP02 [details] [associations]
symbol:RAD51D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
KO:K10871 CTD:5892 OMA:QARTQDE EMBL:AAEX03006625 RefSeq:XP_548263.2
Ensembl:ENSCAFT00000029092 GeneID:491143 KEGG:cfa:491143
NextBio:20864025 Uniprot:E2RP02
Length = 328
Score = 107 (42.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 44 DMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVE 103
D+ +E + S A ++T LD +L G+ EVTEI G PG GKTQ+ + +A NV
Sbjct: 70 DLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCVAANVAY--- 126
Query: 104 FGGLGGKAIYI 114
GL +YI
Sbjct: 127 --GLQQNVVYI 135
Score = 51 (23.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 141 VKVVIIDSIAFHFRHGFVDLALRTRVLSGIALKLMNLAKKFSLALLEPNLATTANLAESC 200
VKVVI+DS+ V L + G+AL +M LA++ L L +L A + +
Sbjct: 200 VKVVIVDSVT-----AVVSPLLGGQQREGLAL-MMQLARE--LKTLARDLGM-AVVVTNH 250
Query: 201 LTCLRDSGSRK 211
+T RDSG K
Sbjct: 251 MTRDRDSGELK 261
>UNIPROTKB|Q2HJ51 [details] [associations]
symbol:RAD51D "DNA repair protein RAD51 homolog 4"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006281 GO:GO:0006310
GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
KO:K10871 EMBL:BC113309 IPI:IPI00716231 RefSeq:NP_001039769.1
UniGene:Bt.59591 ProteinModelPortal:Q2HJ51 STRING:Q2HJ51
Ensembl:ENSBTAT00000025404 GeneID:529507 KEGG:bta:529507 CTD:5892
HOGENOM:HOG000049134 HOVERGEN:HBG057455 InParanoid:Q2HJ51
OMA:QARTQDE OrthoDB:EOG4K0QP3 NextBio:20875047 Uniprot:Q2HJ51
Length = 326
Score = 104 (41.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 44 DMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNV 98
D+ +E + S A ++T LD +L G+ EVTEI G PG GKTQ+ + +A +V
Sbjct: 70 DLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGAPGSGKTQVCLCVAAHV 124
Score = 54 (24.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 141 VKVVIIDSIAFHFRHGFVDLALRTRVLSGIALKLMNLAKKFSLALLEPNLATTANLAESC 200
+KVV++DS+A V L + G+AL +M LA++ L L +L+ A L +
Sbjct: 200 LKVVVVDSVA-----AVVAPLLGGQQREGLAL-MMQLARE--LKTLARDLSV-AVLVTNH 250
Query: 201 LTCLRDSGSRK 211
+T RDSG K
Sbjct: 251 MTRDRDSGQLK 261
>GENEDB_PFALCIPARUM|MAL8P1.76 [details] [associations]
symbol:MAL8P1.76 "meiotic recombination protein
dmc1-like protein" species:5833 "Plasmodium falciparum" [GO:0000794
"condensed nuclear chromosome" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0003677 GO:GO:0006281 GO:GO:0000794 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:AL844507
ProtClustDB:PTZ00035 RefSeq:XP_001349356.2
ProteinModelPortal:Q8IB05 EnsemblProtists:MAL8P1.76:mRNA
GeneID:2655426 KEGG:pfa:MAL8P1.76 EuPathDB:PlasmoDB:PF3D7_0816800
Uniprot:Q8IB05
Length = 347
Score = 121 (47.7 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 40/122 (32%), Positives = 60/122 (49%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
TA +++Q+ + L +ITT D LGGGI +TE+ G GKTQ+ LAV Q+
Sbjct: 96 TANELVQKRSKVL-KITTGSTVFDQTLGGGIESMCITELFGENRCGKTQVCHTLAVTAQL 154
Query: 101 PVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFVDL 160
P G GK YI F E+ V +++ + + V I+ + AF H + L
Sbjct: 155 PKSLNGGNGKVCYIDTEGTFRPEK--VCKIAERYGLDGEAVLDNILYARAFTHEHLYQLL 212
Query: 161 AL 162
A+
Sbjct: 213 AI 214
>UNIPROTKB|Q8IB05 [details] [associations]
symbol:MAL8P1.76 "Meiotic recombination protein dmc1-like
protein" species:36329 "Plasmodium falciparum 3D7" [GO:0000794
"condensed nuclear chromosome" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0003677 GO:GO:0006281 GO:GO:0000794 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:AL844507
ProtClustDB:PTZ00035 RefSeq:XP_001349356.2
ProteinModelPortal:Q8IB05 EnsemblProtists:MAL8P1.76:mRNA
GeneID:2655426 KEGG:pfa:MAL8P1.76 EuPathDB:PlasmoDB:PF3D7_0816800
Uniprot:Q8IB05
Length = 347
Score = 121 (47.7 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 40/122 (32%), Positives = 60/122 (49%)
Query: 41 TAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
TA +++Q+ + L +ITT D LGGGI +TE+ G GKTQ+ LAV Q+
Sbjct: 96 TANELVQKRSKVL-KITTGSTVFDQTLGGGIESMCITELFGENRCGKTQVCHTLAVTAQL 154
Query: 101 PVEFGGLGGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFVDL 160
P G GK YI F E+ V +++ + + V I+ + AF H + L
Sbjct: 155 PKSLNGGNGKVCYIDTEGTFRPEK--VCKIAERYGLDGEAVLDNILYARAFTHEHLYQLL 212
Query: 161 AL 162
A+
Sbjct: 213 AI 214
>UNIPROTKB|O75771 [details] [associations]
symbol:RAD51D "DNA repair protein RAD51 homolog 4"
species:9606 "Homo sapiens" [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006281 EMBL:CH471147
GO:GO:0007131 Orphanet:145 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 EMBL:AC022916 KO:K10871 CTD:5892
HOGENOM:HOG000049134 HOVERGEN:HBG057455 OMA:QARTQDE
OrthoDB:EOG4K0QP3 EMBL:Y15572 EMBL:AF034956 EMBL:AB013341
EMBL:AB016223 EMBL:AB016224 EMBL:AB016225 EMBL:AB018360
EMBL:AB018361 EMBL:AB018362 EMBL:AB018363 EMBL:AB020412
EMBL:AY623116 EMBL:AK296241 EMBL:BC014422 EMBL:AL117459
IPI:IPI00216381 IPI:IPI00216382 IPI:IPI00216383 IPI:IPI00216384
IPI:IPI00216386 IPI:IPI00291454 IPI:IPI00411326 IPI:IPI00791891
PIR:T17247 RefSeq:NP_001136043.1 RefSeq:NP_002869.3
RefSeq:NP_598332.1 UniGene:Hs.631757 PDB:2KZ3 PDBsum:2KZ3
ProteinModelPortal:O75771 SMR:O75771 DIP:DIP-24265N IntAct:O75771
MINT:MINT-127795 STRING:O75771 PhosphoSite:O75771 PRIDE:O75771
DNASU:5892 Ensembl:ENST00000335858 Ensembl:ENST00000345365
Ensembl:ENST00000357906 Ensembl:ENST00000360276
Ensembl:ENST00000394589 GeneID:5892 KEGG:hsa:5892 UCSC:uc002hir.2
UCSC:uc002his.2 GeneCards:GC17M033427 HGNC:HGNC:9823 MIM:602954
MIM:614291 neXtProt:NX_O75771 PharmGKB:PA34179 PhylomeDB:O75771
GenomeRNAi:5892 NextBio:22920 ArrayExpress:O75771 Bgee:O75771
Genevestigator:O75771 GermOnline:ENSG00000185379 Uniprot:O75771
Length = 328
Score = 107 (42.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 44 DMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNV 98
D+ +E + S A ++T LD +L G+ EVTEI G PG GKTQ+ + +A NV
Sbjct: 70 DLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANV 124
Score = 49 (22.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 24/71 (33%), Positives = 36/71 (50%)
Query: 141 VKVVIIDSIAFHFRHGFVDLALRTRVLSGIALKLMNLAKKFSLALLEPNLATTANLAESC 200
VKVV++DS+ V L + G+AL +M LA++ L L +L A + +
Sbjct: 200 VKVVVVDSVT-----AVVSPLLGGQQREGLAL-MMQLARE--LKTLARDLGM-AVVVTNH 250
Query: 201 LTCLRDSGSRK 211
+T RDSG K
Sbjct: 251 ITRDRDSGRLK 261
>POMBASE|SPAC644.14c [details] [associations]
symbol:rad51 "RecA family recombinase Rad51/Rhp51"
species:4896 "Schizosaccharomyces pombe" [GO:0000150 "recombinase
activity" evidence=IDA] [GO:0000711 "meiotic DNA repair synthesis"
evidence=IMP] [GO:0000723 "telomere maintenance" evidence=IGI]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISS] [GO:0000775 "chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=NAS]
[GO:0000794 "condensed nuclear chromosome" evidence=ISO]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0006311 "meiotic gene conversion" evidence=IDA]
[GO:0006312 "mitotic recombination" evidence=IGI] [GO:0007533
"mating type switching" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0030998 "linear element" evidence=IDA]
[GO:0033170 "protein-DNA loading ATPase activity" evidence=TAS]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=TAS] [GO:0042148 "strand invasion" evidence=TAS]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IDA]
[GO:0051260 "protein homooligomerization" evidence=IPI]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
PomBase:SPAC644.14c GO:GO:0005524 GO:GO:0005635 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003684 GO:GO:0051260 GO:GO:0000790
GO:GO:0000724 GO:GO:0006312 GO:GO:0000723 SUPFAM:SSF47794
GO:GO:0042138 GO:GO:0043047 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 GO:GO:0006311 GO:GO:0007533
GO:GO:0030998 GO:GO:0003691 GO:GO:0000711 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:D13805 EMBL:Z22691 EMBL:Z24756 PIR:S42107
ProteinModelPortal:P36601 SMR:P36601 DIP:DIP-29235N IntAct:P36601
MINT:MINT-239321 STRING:P36601 OrthoDB:EOG41CB4Z NextBio:20804587
GO:GO:0033170 GO:GO:0042148 Uniprot:P36601
Length = 365
Score = 120 (47.3 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 50 QESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGG 109
+ L ITT LD +L GG+ +TE+ G GK+Q+ LAV Q+P++ GG G
Sbjct: 118 RSELITITTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEG 177
Query: 110 KAIYI 114
K +YI
Sbjct: 178 KCLYI 182
>UNIPROTKB|B6JXU7 [details] [associations]
symbol:SJAG_01410 "DNA repair protein RAD51" species:402676
"Schizosaccharomyces japonicus yFS275" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0003684 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 OrthoDB:EOG41CB4Z EMBL:DS022225
RefSeq:XP_002172658.1 ProteinModelPortal:B6JXU7 GeneID:7048158
Uniprot:B6JXU7
Length = 370
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 50 QESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGG 109
+ L ITT LD +L GG+ +TE+ G GK+Q+ LAV Q+P++ GG G
Sbjct: 122 RSELITITTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEG 181
Query: 110 KAIYI 114
K +YI
Sbjct: 182 KCLYI 186
>ZFIN|ZDB-GENE-040426-2750 [details] [associations]
symbol:rad51b "RAD51 homolog B (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 ZFIN:ZDB-GENE-040426-2750
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5890 HOVERGEN:HBG061476 KO:K10869
HOGENOM:HOG000154062 HSSP:O74036 EMBL:BC052122 IPI:IPI00506696
RefSeq:NP_998577.1 UniGene:Dr.123796 ProteinModelPortal:Q7ZTX4
PRIDE:Q7ZTX4 GeneID:406721 KEGG:dre:406721 InParanoid:Q7ZTX4
NextBio:20818241 ArrayExpress:Q7ZTX4 Bgee:Q7ZTX4 Uniprot:Q7ZTX4
Length = 373
Score = 120 (47.3 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 34/119 (28%), Positives = 51/119 (42%)
Query: 6 LPISATQRGKLISAGYTXXXXXXXXXXXXXXRGTQTAWDMLQEEQESLARITTSCADLDN 65
L ++ + +L Y TA D+ + ++E +TS LD
Sbjct: 31 LSVTQVELSRLAGLSYPAALNLQRLVSKACAPAVITALDLWKRKEELC--FSTSLPALDR 88
Query: 66 ILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGLGGKAIYIGKCLGFYTEQ 124
+L GG+ +TE+ G G GKTQL + L+V +P GGL IYI F E+
Sbjct: 89 LLHGGLPRGALTEVTGPSGCGKTQLCMMLSVLATLPKSLGGLDSGVIYIDTESAFSAER 147
>UNIPROTKB|E1BVK2 [details] [associations]
symbol:RAD51D "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
GeneTree:ENSGT00550000074609 KO:K10871 CTD:5892 OMA:QARTQDE
EMBL:AADN02025945 IPI:IPI00597433 RefSeq:NP_001185575.1
UniGene:Gga.9680 ProteinModelPortal:E1BVK2
Ensembl:ENSGALT00000003463 GeneID:417528 KEGG:gga:417528
NextBio:20820813 Uniprot:E1BVK2
Length = 327
Score = 107 (42.7 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 44 DMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQI 100
D+ +E + S A + T LD +L G+ EVTE+ G PG GKTQ+ + +A +V +
Sbjct: 70 DLYEELKSSTAILPTGNPSLDQLLDAGLYTGEVTELAGAPGSGKTQVCLSIAASVSL 126
Score = 47 (21.6 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 166 VLSGIALKLMNLAKKFSLALLEPNLAT 192
++ +A +L LAK+FS+A++ N T
Sbjct: 226 IMMQLARELKTLAKEFSVAVVVTNQVT 252
>UNIPROTKB|Q0MR21 [details] [associations]
symbol:Q0MR21 "DMC1-like protein" species:37727
"Talaromyces marneffei" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
EMBL:DQ863299 ProteinModelPortal:Q0MR21 Uniprot:Q0MR21
Length = 337
Score = 117 (46.2 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 46 LQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFG 105
L +++ + +I+T D ILGGG ++E+ G GKTQL ++V Q+P E G
Sbjct: 88 LCHQRKKVFKISTGSKQFDTILGGGFQSSSISEVYGEFRCGKTQLSHTMSVIAQLPKEMG 147
Query: 106 GLGGKAIYI 114
G GK YI
Sbjct: 148 GGEGKVAYI 156
>UNIPROTKB|K7EN92 [details] [associations]
symbol:RAD51D "DNA repair protein RAD51 homolog 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 EMBL:AC022916
HGNC:HGNC:9823 Ensembl:ENST00000592577 Uniprot:K7EN92
Length = 249
Score = 107 (42.7 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 44 DMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNV 98
D+ +E + S A ++T LD +L G+ EVTEI G PG GKTQ+ + +A NV
Sbjct: 72 DLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANV 126
Score = 40 (19.1 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 141 VKVVIIDSIAFHFRHGFVDLALRTRVLSGIALKLMNLAKK 180
VKVV++DS+ V L + G+AL +M LA++
Sbjct: 202 VKVVVVDSVT-----AVVSPLLGGQQREGLAL-MMQLARE 235
>DICTYBASE|DDB_G0273611 [details] [associations]
symbol:rad51-2 "putative DNA repair protein 51"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0051106 "positive regulation of DNA ligation" evidence=ISS]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0003697 "single-stranded
DNA binding" evidence=ISS] [GO:0003690 "double-stranded DNA
binding" evidence=ISS] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 dictyBase:DDB_G0273611
dictyBase:DDB_G0273139 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0003690 GO:GO:0003697
GO:GO:0000724 SUPFAM:SSF47794 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0043142
GO:GO:0006268 KO:K04482 GO:GO:0051106 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 RefSeq:XP_644422.1
RefSeq:XP_644828.1 ProteinModelPortal:Q557E6 SMR:Q557E6
STRING:Q557E6 EnsemblProtists:DDB0232316 EnsemblProtists:DDB0304849
GeneID:8618930 GeneID:8619047 KEGG:ddi:DDB_G0273139
KEGG:ddi:DDB_G0273611 InParanoid:Q557E6 ProtClustDB:PTZ00035
Uniprot:Q557E6
Length = 351
Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
Identities = 30/77 (38%), Positives = 43/77 (55%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G +TA D+ + E + +ITT + D++L GGI +TEI G GKTQ+ L V
Sbjct: 95 GFRTATDINKARAE-IIQITTGSKEFDSLLDGGIESGSITEIFGEFRTGKTQICHTLCVT 153
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+ GG G+A+YI
Sbjct: 154 CQLGYSQGGGEGRALYI 170
>DICTYBASE|DDB_G0273139 [details] [associations]
symbol:rad51-1 "putative DNA repair protein 51"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0051106 "positive regulation of DNA ligation" evidence=ISS]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0003697 "single-stranded
DNA binding" evidence=ISS] [GO:0003690 "double-stranded DNA
binding" evidence=ISS] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 dictyBase:DDB_G0273611
dictyBase:DDB_G0273139 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0003690 GO:GO:0003697
GO:GO:0000724 SUPFAM:SSF47794 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0043142
GO:GO:0006268 KO:K04482 GO:GO:0051106 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 RefSeq:XP_644422.1
RefSeq:XP_644828.1 ProteinModelPortal:Q557E6 SMR:Q557E6
STRING:Q557E6 EnsemblProtists:DDB0232316 EnsemblProtists:DDB0304849
GeneID:8618930 GeneID:8619047 KEGG:ddi:DDB_G0273139
KEGG:ddi:DDB_G0273611 InParanoid:Q557E6 ProtClustDB:PTZ00035
Uniprot:Q557E6
Length = 351
Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
Identities = 30/77 (38%), Positives = 43/77 (55%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVN 97
G +TA D+ + E + +ITT + D++L GGI +TEI G GKTQ+ L V
Sbjct: 95 GFRTATDINKARAE-IIQITTGSKEFDSLLDGGIESGSITEIFGEFRTGKTQICHTLCVT 153
Query: 98 VQIPVEFGGLGGKAIYI 114
Q+ GG G+A+YI
Sbjct: 154 CQLGYSQGGGEGRALYI 170
>UNIPROTKB|E2R3A3 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR010995 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 SUPFAM:SSF47794 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 GeneTree:ENSGT00550000075091
EMBL:AAEX03007314 Ensembl:ENSCAFT00000035193 Uniprot:E2R3A3
Length = 285
Score = 84 (34.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQL 90
G TA++ E+++ + ITT + D +LGGGI +TE G GKTQL
Sbjct: 84 GFLTAFEY-SEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQL 135
Score = 67 (28.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 124 QSAVINYLD-KFVSEHKDVKVVIIDSIAFHFRHGFV---DLALRTRVLSGIALKLMNLAK 179
Q +++Y+ KF E K++IIDSI FR F +LA R + L+ + +L +++
Sbjct: 144 QMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISE 203
Query: 180 KFSLALLEPNLAT 192
++++A+ N T
Sbjct: 204 EYNVAVFVTNQMT 216
>UNIPROTKB|B4DMW6 [details] [associations]
symbol:DMC1 "Meiotic recombination protein DMC1/LIM15
homolog" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR010995
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426
InterPro:IPR013632 Pfam:PF08423 EMBL:AL022320 UniGene:Hs.339396
HGNC:HGNC:2927 HOVERGEN:HBG001504 IPI:IPI00880171 EMBL:AK297664
ProteinModelPortal:B4DMW6 SMR:B4DMW6 STRING:B4DMW6
Ensembl:ENST00000428462 UCSC:uc011anv.1 ArrayExpress:B4DMW6
Bgee:B4DMW6 Uniprot:B4DMW6
Length = 285
Score = 84 (34.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 38 GTQTAWDMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQL 90
G TA++ E+++ + ITT + D +LGGGI +TE G GKTQL
Sbjct: 84 GFLTAFEY-SEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQL 135
Score = 67 (28.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 124 QSAVINYLD-KFVSEHKDVKVVIIDSIAFHFRHGFV---DLALRTRVLSGIALKLMNLAK 179
Q +++Y+ KF E K++IIDSI FR F +LA R + L+ + +L +++
Sbjct: 144 QMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISE 203
Query: 180 KFSLALLEPNLAT 192
++++A+ N T
Sbjct: 204 EYNVAVFVTNQMT 216
>MGI|MGI:1261809 [details] [associations]
symbol:Rad51d "RAD51 homolog D" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
MGI:MGI:1261809 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 KO:K10871 CTD:5892 HOGENOM:HOG000049134
HOVERGEN:HBG057455 OMA:QARTQDE OrthoDB:EOG4K0QP3 EMBL:AB007040
EMBL:AF034955 EMBL:Y15570 EMBL:AK017835 EMBL:BC049136
IPI:IPI00116701 RefSeq:NP_035365.1 UniGene:Mm.9286
ProteinModelPortal:O55230 SMR:O55230 MINT:MINT-415416 STRING:O55230
PhosphoSite:O55230 PRIDE:O55230 Ensembl:ENSMUST00000018985
GeneID:19364 KEGG:mmu:19364 InParanoid:O55230 NextBio:296433
Bgee:O55230 CleanEx:MM_RAD51L3 Genevestigator:O55230
GermOnline:ENSMUSG00000018841 Uniprot:O55230
Length = 329
Score = 106 (42.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 44 DMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNV 98
D+ +E + S A ++T LD +L G+ EVTEI G PG GKTQ+ + +A NV
Sbjct: 70 DLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCLCVAANV 124
Score = 42 (19.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 26/83 (31%), Positives = 38/83 (45%)
Query: 141 VKVVIIDSIAFHFRHGFVDLALRTRVLSGIALKLMNLAKKFSLALLEPNLATTANLAESC 200
VKVVI+DS+ V L + G+AL +M LA++ L +L +L A + +
Sbjct: 200 VKVVIVDSVT-----AVVAPLLGGQQREGLAL-MMQLARE--LKILARDLGV-AVVVTNH 250
Query: 201 LTCLRDSGSRKXXXXXXXQLGFV 223
LT RD R+ FV
Sbjct: 251 LT--RDWDGRRFKPALGRSWSFV 271
>ZFIN|ZDB-GENE-040426-2490 [details] [associations]
symbol:rad51d "RAD51 homolog D (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
ZFIN:ZDB-GENE-040426-2490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K10871 CTD:5892
HOGENOM:HOG000049134 HOVERGEN:HBG057455 OrthoDB:EOG4K0QP3
EMBL:BC066407 IPI:IPI00512042 RefSeq:NP_996959.1 UniGene:Dr.19061
ProteinModelPortal:Q6NYZ3 STRING:Q6NYZ3 PRIDE:Q6NYZ3 GeneID:404608
KEGG:dre:404608 InParanoid:Q6NYZ3 NextBio:20817676
ArrayExpress:Q6NYZ3 Bgee:Q6NYZ3 Uniprot:Q6NYZ3
Length = 327
Score = 106 (42.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 44 DMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNV 98
D+ +E S A ++T LD +L G+ E+TE+ G PG GKTQ+ +AVN+
Sbjct: 70 DLYEELLSSTAILSTGSPSLDKLLDSGLYTGEITELTGSPGSGKTQVCFSVAVNI 124
Score = 40 (19.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 166 VLSGIALKLMNLAKKFSLALLEPNLAT 192
+L +A +L +AK F++A+L N T
Sbjct: 226 LLMQVAGELKMIAKDFNIAVLVTNHVT 252
>UNIPROTKB|Q9GRA3 [details] [associations]
symbol:CnDmc1 "DMC1 homologue CnDMC1" species:6087 "Hydra
vulgaris" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150 HSSP:Q06609
EMBL:AB047581 ProteinModelPortal:Q9GRA3 SMR:Q9GRA3 Uniprot:Q9GRA3
Length = 331
Score = 111 (44.1 bits), Expect = 0.00037, P = 0.00037
Identities = 41/144 (28%), Positives = 64/144 (44%)
Query: 48 EEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGL 107
E ++ RI+T +LD +LGGGI +TE G GKTQ+ L V Q+P
Sbjct: 84 EIRKQCFRISTGSMELDKLLGGGIESMSITEAFGEFRTGKTQISHTLCVTAQLPGPNNYP 143
Query: 108 GGKAIYIGKCLGFYTEQSAVINYLDKFVSEHKDVKVVIIDSIAFHFRHGFVDLALRTRVL 167
GGK ++I F + I D+F +H+ + I+ A+ F VL
Sbjct: 144 GGKVMFIDTENTFRPNRLRSI--ADRFNLDHEAMLGNIVFCRAYTSEQQF-------EVL 194
Query: 168 SGIALKLMNLAKKFSLALLEPNLA 191
++ K A F L +++ +A
Sbjct: 195 DMVSAKFHEEAGVFKLLIIDSIMA 218
>RGD|1306944 [details] [associations]
symbol:Rad51d "RAD51 homolog D (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1306944
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 EMBL:CH473948
GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423 UniGene:Rn.206266
IPI:IPI00782474 Ensembl:ENSRNOT00000055971 Uniprot:D4A2C5
Length = 233
Score = 103 (41.3 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 44 DMLQEEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNV 98
D+ +E + S A ++T LD +L G+ E+TEI G PG GKTQ+ + +A NV
Sbjct: 70 DLYEELKTSTAILSTGIGSLDKLLDAGLYTGELTEIVGGPGSGKTQVCLCVAANV 124
Score = 37 (18.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 7/9 (77%), Positives = 9/9 (100%)
Query: 141 VKVVIIDSI 149
VKVVI+DS+
Sbjct: 200 VKVVIVDSV 208
>GENEDB_PFALCIPARUM|PF11_0087 [details] [associations]
symbol:PF11_0087 "Rad51 homolog, putative"
species:5833 "Plasmodium falciparum" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0003684 GO:GO:0006281
SUPFAM:SSF47794 EMBL:AE014186 GO:GO:0008094 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 ProtClustDB:PTZ00035 GenomeReviews:AE014186_GR
RefSeq:XP_001347762.2 ProteinModelPortal:Q8IIS8 SMR:Q8IIS8
EnsemblProtists:PF11_0087:mRNA GeneID:810638 KEGG:pfa:PF11_0087
EuPathDB:PlasmoDB:PF3D7_1107400 Uniprot:Q8IIS8
Length = 350
Score = 110 (43.8 bits), Expect = 0.00054, P = 0.00054
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 48 EEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGL 107
+ +++L + TT LD +L GGI +TE+ G GK+QL LA+ Q+P+E G
Sbjct: 104 DARQNLIKFTTGSKQLDALLKGGIETGGITELFGEFRTGKSQLCHTLAITCQLPIEQSGG 163
Query: 108 GGKAIYI 114
GK ++I
Sbjct: 164 EGKCLWI 170
>UNIPROTKB|Q8IIS8 [details] [associations]
symbol:Rad51 "Rad51 homolog" species:36329 "Plasmodium
falciparum 3D7" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
GO:GO:0006281 SUPFAM:SSF47794 EMBL:AE014186 GO:GO:0008094
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 ProtClustDB:PTZ00035
GenomeReviews:AE014186_GR RefSeq:XP_001347762.2
ProteinModelPortal:Q8IIS8 SMR:Q8IIS8 EnsemblProtists:PF11_0087:mRNA
GeneID:810638 KEGG:pfa:PF11_0087 EuPathDB:PlasmoDB:PF3D7_1107400
Uniprot:Q8IIS8
Length = 350
Score = 110 (43.8 bits), Expect = 0.00054, P = 0.00054
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 48 EEQESLARITTSCADLDNILGGGIGCREVTEIGGVPGIGKTQLGIQLAVNVQIPVEFGGL 107
+ +++L + TT LD +L GGI +TE+ G GK+QL LA+ Q+P+E G
Sbjct: 104 DARQNLIKFTTGSKQLDALLKGGIETGGITELFGEFRTGKSQLCHTLAITCQLPIEQSGG 163
Query: 108 GGKAIYI 114
GK ++I
Sbjct: 164 EGKCLWI 170
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.139 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 226 205 0.00096 111 3 11 22 0.47 32
31 0.47 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 108
No. of states in DFA: 596 (63 KB)
Total size of DFA: 147 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.11u 0.10s 17.21t Elapsed: 00:00:01
Total cpu time: 17.12u 0.10s 17.22t Elapsed: 00:00:01
Start: Mon May 20 15:23:08 2013 End: Mon May 20 15:23:09 2013
WARNINGS ISSUED: 1