BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>036465
MPQVDLETLVSACAEPKSRAHHDADDHQEPEIPPDLPPDSFWLSKDAEFDWFDRNAFYER
KESQKGHSHSNPIGLNPNPSSTSQRFSTPTTTTLKTKTSIIGLPKPQQKFDPKCKRHCKT
NTNWFPKRSGSVGKSDGPLCEPSSPKVSCIGRVRSKRDRRRLKKRQGSGSESGSLRSKSE
RKQKSGLFASLKTIFRLRKGSEGKSRERRKESSDRKSGVITTHDIRDRLPRGEAHALSKR
VESPPRKSIASEPRRSVDGEPVGLGGMTRFASGRRSDSWIGDVA

High Scoring Gene Products

Symbol, full name Information P value
AT3G52710 protein from Arabidopsis thaliana 6.9e-31
AT2G36220 protein from Arabidopsis thaliana 1.2e-28

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  036465
        (284 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2083203 - symbol:AT3G52710 "AT3G52710" species...   340  6.9e-31   1
TAIR|locus:2049480 - symbol:AT2G36220 "AT2G36220" species...   243  1.2e-28   2


>TAIR|locus:2083203 [details] [associations]
            symbol:AT3G52710 "AT3G52710" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0009693 "ethylene biosynthetic process" evidence=RCA]
            GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL353912
            EMBL:AY074311 EMBL:AY096409 IPI:IPI00526483 PIR:T49024
            RefSeq:NP_190839.1 UniGene:At.35266 EnsemblPlants:AT3G52710.1
            GeneID:824437 KEGG:ath:AT3G52710 TAIR:At3g52710 eggNOG:NOG318296
            HOGENOM:HOG000091113 InParanoid:Q9LXJ3 OMA:RIARTLM PhylomeDB:Q9LXJ3
            ProtClustDB:CLSN2684788 ArrayExpress:Q9LXJ3 Genevestigator:Q9LXJ3
            Uniprot:Q9LXJ3
        Length = 289

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 117/302 (38%), Positives = 143/302 (47%)

Query:     1 MPQVDLETLVSAC---AEPKSRAHHDADDHQE-P---EIPP------DLPPDSFWLSKDA 47
             MPQV    + SAC   ++ K      ADD+++ P   +I P      D PP+S+ LSK+A
Sbjct:     1 MPQV----VASACTGGSDRKISCETLADDNEDSPHNSKIRPVSISAVDFPPESYSLSKEA 56

Query:    48 EFDWFDRNAFYERKESQKGHSHSNPIGLNPNPXXXXXXXXXXXXXXXXXXXSIIGLPKPQ 107
             + +W + NAF+ERKESQKG+S S PI  NPN                    SII LPKPQ
Sbjct:    57 QLEWLNDNAFFERKESQKGNS-SAPIS-NPN----TNPNSSSHRISLKSKASIIRLPKPQ 110

Query:   108 QK-F-DPKCKRHCK-TNTNWFPKRSGSVGKSDGPLCEPSSPKVSCIGXXXXXXXXXXXXX 164
             +  F + K +R+C+   T   PKR GS  KSD  L EP SPKVSCIG             
Sbjct:   111 KTCFNEAKKRRNCRIARTLMIPKRIGSRLKSDPTLSEPCSPKVSCIGRVRSKRDRSRRMQ 170

Query:   165 XQGXXXXXXXXXXXXXXXQKSGLFASLKTIFRLXXXXXXXXXXXXXXXXXXXX------X 218
              Q                +K G FAS + IFR                            
Sbjct:   171 RQ-KSGRTNSFKDKPVPVKKPGFFASFRAIFRTGGGCKDLSASGAHAPRRDVVVSPPRVS 229

Query:   219 VITTHDIRDRLPRGEAHALSKRVESPPRKSIASEPRRSVDG-EPV--GLGGMTRFASGRR 275
             V  + DIR RLP G+   + K   SP R S  S  RRS+DG EPV  GLGGMTRF SGRR
Sbjct:   230 VRRSTDIRGRLPPGD---VGK--SSPQRNSTGS--RRSIDGGEPVLPGLGGMTRFTSGRR 282

Query:   276 SD 277
              D
Sbjct:   283 PD 284


>TAIR|locus:2049480 [details] [associations]
            symbol:AT2G36220 "AT2G36220" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0009061 "anaerobic
            respiration" evidence=IEP;IMP] [GO:0010200 "response to chitin"
            evidence=RCA] [GO:0010286 "heat acclimation" evidence=RCA]
            EMBL:CP002685 EMBL:AC006921 GO:GO:0009061 UniGene:At.20166
            UniGene:At.66347 ProtClustDB:CLSN2684788 EMBL:AY053408
            EMBL:AY074832 IPI:IPI00528768 PIR:B84778 RefSeq:NP_565838.1
            STRING:Q9SJN3 PRIDE:Q9SJN3 EnsemblPlants:AT2G36220.1 GeneID:818194
            KEGG:ath:AT2G36220 TAIR:At2g36220 InParanoid:Q9SJN3 OMA:VSARETH
            PhylomeDB:Q9SJN3 ArrayExpress:Q9SJN3 Genevestigator:Q9SJN3
            Uniprot:Q9SJN3
        Length = 263

 Score = 243 (90.6 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
 Identities = 80/214 (37%), Positives = 99/214 (46%)

Query:     1 MPQVDLETLVSA-CA----EPKSRAHHDADDHQEPEI-------PPDLPPDSFWLSKDAE 48
             MPQVD+E  VS+ C       K      ADD   P         P D PP+S++LS DA+
Sbjct:     1 MPQVDIEAFVSSVCIGGSDHRKIVCETLADDSTIPPYYNNSAVSPSDFPPESYFLSNDAQ 60

Query:    49 FDWFDRNAFYERKESQKGHS---HSNPIGLNPNPXXXXXXXXXXXXXXXXXXXSIIGLPK 105
              +W   NAF++RK+SQKG+S   +SNP   N NP                   SIIGLPK
Sbjct:    61 LEWLSDNAFFDRKDSQKGNSGILNSNP---NSNPSSQRFLLKSKA--------SIIGLPK 109

Query:   106 PQQK-F-DPKCKRHCKTNTNWFPKRSGSVGKSDGPLCEPSSPKVSCIGXXXXXXXXXXXX 163
             PQ+  F + K +RH   N     KR GS  K+D  L EPSSPKVSCIG            
Sbjct:   110 PQKTCFNEAKQRRHAGKN-RVILKRVGSRIKTDISLLEPSSPKVSCIGRVRSRRERSRRM 168

Query:   164 XXQGXXXXXXXXXXXXXXXQKSGLFASLKTIFRL 197
               Q                +K G  AS + IFR+
Sbjct:   169 HRQ-----KSSRVEPVNRVKKPGFMASFRAIFRI 197

 Score = 91 (37.1 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
 Identities = 30/58 (51%), Positives = 32/58 (55%)

Query:   222 THDIRDRLPRGEAHALSKRVESPPRKSIASEPRRSVDGEPV--GLGGMTRFASGRRSD 277
             THDIR RLP  EA            KS+         GEPV  GLGGMTRFASGRR+D
Sbjct:   216 THDIRSRLP-AEAD----------EKSVFD------GGEPVVPGLGGMTRFASGRRAD 256


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.134   0.422    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      284       215   0.00087  112 3  11 23  0.43    33
                                                     32  0.50    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  196 KB (2110 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.37u 0.10s 18.47t   Elapsed:  00:00:00
  Total cpu time:  18.37u 0.10s 18.47t   Elapsed:  00:00:00
  Start:  Mon May 20 15:26:45 2013   End:  Mon May 20 15:26:45 2013

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