Query 036465
Match_columns 284
No_of_seqs 40 out of 42
Neff 2.8
Searched_HMMs 13730
Date Mon Mar 25 22:26:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036465.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036465hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1knqa_ c.37.1.17 (A:) Glucona 12.4 41 0.003 23.3 1.6 18 92-109 2-20 (171)
2 d1yj5a2 c.37.1.1 (A:351-522) 5 9.6 65 0.0047 23.8 2.0 19 93-111 11-31 (172)
3 d1nrjb_ c.37.1.8 (B:) Signal r 9.5 54 0.0039 23.5 1.4 16 94-109 2-17 (209)
4 d1rkba_ c.37.1.1 (A:) Adenylat 8.5 61 0.0045 22.1 1.3 15 95-109 4-18 (173)
5 d2iyva1 c.37.1.2 (A:2-166) Shi 8.2 60 0.0044 23.1 1.2 14 96-109 2-15 (165)
6 d1bifa1 c.37.1.7 (A:37-249) 6- 6.9 72 0.0053 22.6 1.1 12 98-109 5-16 (213)
7 d1puia_ c.37.1.8 (A:) Probable 6.3 1.1E+02 0.0078 21.0 1.7 22 84-109 9-30 (188)
8 d1v5pa_ b.55.1.1 (A:) Tapp2 {M 5.7 62 0.0045 21.7 0.1 11 1-11 8-18 (126)
9 d1qf9a_ c.37.1.1 (A:) UMP/CMP 5.5 99 0.0072 22.1 1.2 16 94-109 4-20 (194)
10 d1m8pa3 c.37.1.15 (A:391-573) 5.2 1.2E+02 0.0089 20.3 1.4 10 100-109 11-20 (183)
No 1
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=12.38 E-value=41 Score=23.26 Aligned_cols=18 Identities=11% Similarity=0.250 Sum_probs=14.0
Q ss_pred CCCccceE-EEccCCCCcc
Q 036465 92 TTLKTKTS-IIGLPKPQQK 109 (284)
Q Consensus 92 ~nlk~kAa-IiGLP~~qk~ 109 (284)
+|...+.. |+|+|+..|+
T Consensus 2 ~~~~~~iivl~G~~GsGKs 20 (171)
T d1knqa_ 2 TNHDHHIYVLMGVSGSGKS 20 (171)
T ss_dssp CCTTSEEEEEECSTTSCHH
T ss_pred CCCCCeEEEEECCCCCCHH
Confidence 46666655 8999999877
No 2
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=9.59 E-value=65 Score=23.77 Aligned_cols=19 Identities=16% Similarity=0.384 Sum_probs=14.2
Q ss_pred CCccceE-EEccCCCCcc-CC
Q 036465 93 TLKTKTS-IIGLPKPQQK-FD 111 (284)
Q Consensus 93 nlk~kAa-IiGLP~~qk~-~~ 111 (284)
+..|... ++|||+..|+ +.
T Consensus 11 ~~~p~liil~G~pGsGKST~a 31 (172)
T d1yj5a2 11 SPNPEVVVAVGFPGAGKSTFI 31 (172)
T ss_dssp CSSCCEEEEECCTTSSHHHHH
T ss_pred CCCCEEEEEECCCCCCHHHHH
Confidence 4556655 9999999988 53
No 3
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=9.46 E-value=54 Score=23.47 Aligned_cols=16 Identities=13% Similarity=0.177 Sum_probs=14.3
Q ss_pred CccceEEEccCCCCcc
Q 036465 94 LKTKTSIIGLPKPQQK 109 (284)
Q Consensus 94 lk~kAaIiGLP~~qk~ 109 (284)
.+|+++|||.|...|+
T Consensus 2 ~~p~V~lvG~~n~GKT 17 (209)
T d1nrjb_ 2 YQPSIIIAGPQNSGKT 17 (209)
T ss_dssp CCCEEEEECSTTSSHH
T ss_pred CCCEEEEECCCCCCHH
Confidence 5788999999999988
No 4
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=8.51 E-value=61 Score=22.07 Aligned_cols=15 Identities=13% Similarity=0.200 Sum_probs=12.7
Q ss_pred ccceEEEccCCCCcc
Q 036465 95 KTKTSIIGLPKPQQK 109 (284)
Q Consensus 95 k~kAaIiGLP~~qk~ 109 (284)
.++.+|+|+|+..|+
T Consensus 4 ~~~I~i~G~pGsGKT 18 (173)
T d1rkba_ 4 LPNILLTGTPGVGKT 18 (173)
T ss_dssp CCCEEEECSTTSSHH
T ss_pred CCEEEEECCCCCCHH
Confidence 467889999999887
No 5
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=8.21 E-value=60 Score=23.06 Aligned_cols=14 Identities=29% Similarity=0.641 Sum_probs=11.8
Q ss_pred cceEEEccCCCCcc
Q 036465 96 TKTSIIGLPKPQQK 109 (284)
Q Consensus 96 ~kAaIiGLP~~qk~ 109 (284)
|+.+|||+|+..|+
T Consensus 2 p~IvliG~~G~GKS 15 (165)
T d2iyva1 2 PKAVLVGLPGSGKS 15 (165)
T ss_dssp CSEEEECSTTSSHH
T ss_pred CcEEEECCCCCCHH
Confidence 56889999998877
No 6
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=6.88 E-value=72 Score=22.58 Aligned_cols=12 Identities=25% Similarity=0.598 Sum_probs=10.2
Q ss_pred eEEEccCCCCcc
Q 036465 98 TSIIGLPKPQQK 109 (284)
Q Consensus 98 AaIiGLP~~qk~ 109 (284)
.+++|||+..|+
T Consensus 5 i~l~GlpgsGKS 16 (213)
T d1bifa1 5 IVMVGLPARGKT 16 (213)
T ss_dssp EEEECCTTSSHH
T ss_pred EEEECCCCCCHH
Confidence 348999999988
No 7
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=6.30 E-value=1.1e+02 Score=20.96 Aligned_cols=22 Identities=5% Similarity=0.184 Sum_probs=16.9
Q ss_pred ccccCCCcCCCccceEEEccCCCCcc
Q 036465 84 QRFSTPTTTTLKTKTSIIGLPKPQQK 109 (284)
Q Consensus 84 qRfs~~t~~nlk~kAaIiGLP~~qk~ 109 (284)
++++. ...++++|+|.|...|.
T Consensus 9 ~~~p~----~~~~~I~lvG~~NvGKS 30 (188)
T d1puia_ 9 RHLPS----DTGIEVAFAGRSNAGKS 30 (188)
T ss_dssp GGSSC----SCSEEEEEEECTTSSHH
T ss_pred hHCCC----ccCCEEEEECCCCCCHH
Confidence 45554 45678999999999888
No 8
>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=5.70 E-value=62 Score=21.75 Aligned_cols=11 Identities=36% Similarity=0.585 Sum_probs=7.2
Q ss_pred CCCcchhhhhh
Q 036465 1 MPQVDLETLVS 11 (284)
Q Consensus 1 MPQvDLEsLv~ 11 (284)
||+||.+...|
T Consensus 8 ~p~~~~~~~~~ 18 (126)
T d1v5pa_ 8 MPYVDRQNRIC 18 (126)
T ss_dssp SCCCCCCCCEE
T ss_pred cccccCCCcee
Confidence 67777766554
No 9
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=5.48 E-value=99 Score=22.13 Aligned_cols=16 Identities=19% Similarity=0.285 Sum_probs=12.1
Q ss_pred Cccce-EEEccCCCCcc
Q 036465 94 LKTKT-SIIGLPKPQQK 109 (284)
Q Consensus 94 lk~kA-aIiGLP~~qk~ 109 (284)
-||+. .|+|.|++.|.
T Consensus 4 ~kp~iI~i~G~pGSGKs 20 (194)
T d1qf9a_ 4 SKPNVVFVLGGPGSGKG 20 (194)
T ss_dssp CCCEEEEEEESTTSSHH
T ss_pred CCCcEEEEECCCCCCHH
Confidence 45655 49999998876
No 10
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=5.18 E-value=1.2e+02 Score=20.30 Aligned_cols=10 Identities=10% Similarity=0.288 Sum_probs=9.2
Q ss_pred EEccCCCCcc
Q 036465 100 IIGLPKPQQK 109 (284)
Q Consensus 100 IiGLP~~qk~ 109 (284)
|+|||+..|+
T Consensus 11 l~G~~GsGKT 20 (183)
T d1m8pa3 11 LTGYMNSGKD 20 (183)
T ss_dssp EECSTTSSHH
T ss_pred EECCCCCCHH
Confidence 8999999887
Done!