Query 036467
Match_columns 369
No_of_seqs 154 out of 1561
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 22:28:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036467.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036467hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2woz_A Kelch repeat and BTB do 99.6 9.8E-12 3.3E-16 111.4 29.9 197 110-348 79-293 (318)
2 4asc_A Kelch repeat and BTB do 99.6 4.3E-12 1.5E-16 113.6 27.1 198 110-348 68-283 (315)
3 3ii7_A Kelch-like protein 7; p 99.5 7E-12 2.4E-16 111.7 23.8 216 92-350 50-280 (306)
4 2xn4_A Kelch-like protein 2; s 99.5 1.6E-11 5.3E-16 109.2 25.1 212 94-349 58-283 (302)
5 2vpj_A Kelch-like protein 12; 99.5 1.9E-11 6.7E-16 108.5 24.4 212 93-349 58-285 (301)
6 1zgk_A Kelch-like ECH-associat 99.5 2.5E-11 8.6E-16 108.2 24.3 213 93-350 66-295 (308)
7 3ii7_A Kelch-like protein 7; p 99.4 2.5E-11 8.5E-16 108.1 22.0 197 108-349 23-232 (306)
8 2xn4_A Kelch-like protein 2; s 99.3 1.8E-10 6.3E-15 102.2 21.7 197 108-349 29-236 (302)
9 2vpj_A Kelch-like protein 12; 99.3 3.9E-10 1.3E-14 100.0 23.2 197 108-349 30-238 (301)
10 1zgk_A Kelch-like ECH-associat 99.3 1.3E-10 4.4E-15 103.6 18.5 202 107-349 37-247 (308)
11 2uvk_A YJHT; unknown function, 99.3 1.3E-10 4.6E-15 105.7 18.3 224 93-350 15-302 (357)
12 4asc_A Kelch repeat and BTB do 99.3 4.7E-10 1.6E-14 100.2 20.4 204 109-349 13-228 (315)
13 2woz_A Kelch repeat and BTB do 99.2 1.1E-09 3.8E-14 97.9 20.2 150 174-349 78-238 (318)
14 2zwa_A Leucine carboxyl methyl 99.1 3.8E-09 1.3E-13 104.5 19.8 213 96-351 396-644 (695)
15 2uvk_A YJHT; unknown function, 99.1 9.6E-09 3.3E-13 93.3 19.9 151 174-348 168-348 (357)
16 1fs1_A SKP2 F-BOX, cyclin A/CD 99.0 7.2E-11 2.5E-15 75.4 1.3 40 1-40 11-50 (53)
17 2e31_A FBS1, F-box only protei 99.0 1E-10 3.6E-15 101.4 1.7 46 1-46 53-99 (297)
18 2ovr_B FBW7, F-BOX/WD repeat p 98.8 1.4E-06 4.8E-11 81.2 24.8 233 1-279 21-268 (445)
19 3v7d_B Cell division control p 98.8 9.1E-06 3.1E-10 76.0 28.9 41 1-41 17-58 (464)
20 1k3i_A Galactose oxidase precu 98.7 3.6E-07 1.2E-11 89.9 17.2 109 110-238 220-329 (656)
21 1p22_A F-BOX/WD-repeat protein 98.7 8.8E-06 3E-10 75.6 24.5 43 2-44 14-60 (435)
22 2zwa_A Leucine carboxyl methyl 98.7 3.9E-07 1.4E-11 90.1 15.3 158 172-350 410-591 (695)
23 1k3i_A Galactose oxidase precu 98.4 2.5E-06 8.6E-11 83.9 12.2 207 111-348 168-384 (656)
24 3l2o_B F-box only protein 4; s 97.8 2.6E-06 8.8E-11 73.1 0.5 48 1-48 7-54 (312)
25 2ast_B S-phase kinase-associat 97.2 6.2E-05 2.1E-09 67.3 0.3 38 1-38 11-48 (336)
26 2p1m_B Transport inhibitor res 96.4 0.00046 1.6E-08 66.7 -0.3 32 1-32 8-40 (594)
27 3ogk_B Coronatine-insensitive 96.0 0.001 3.5E-08 64.2 -0.2 32 1-32 15-47 (592)
28 3mbr_X Glutamine cyclotransfer 95.7 0.64 2.2E-05 39.0 15.8 114 203-350 27-142 (243)
29 3q7m_A Lipoprotein YFGL, BAMB; 95.1 1.1 3.7E-05 39.9 16.5 135 174-348 198-343 (376)
30 3nol_A Glutamine cyclotransfer 94.2 1.2 4.2E-05 37.6 13.5 114 203-350 49-164 (262)
31 2iwa_A Glutamine cyclotransfer 94.1 2.1 7E-05 36.4 14.8 112 207-351 32-145 (266)
32 3ei3_B DNA damage-binding prot 93.6 3.6 0.00012 36.3 21.9 198 95-345 82-285 (383)
33 3jrp_A Fusion protein of prote 93.2 3.9 0.00013 35.6 22.4 145 173-344 78-242 (379)
34 3jro_A Fusion protein of prote 93.0 7.6 0.00026 38.3 19.5 145 173-344 76-240 (753)
35 3nok_A Glutaminyl cyclase; bet 92.8 2.2 7.5E-05 36.2 12.6 112 203-351 61-174 (268)
36 2z2n_A Virginiamycin B lyase; 92.0 4.9 0.00017 33.7 21.3 190 95-346 107-299 (299)
37 4aez_A CDC20, WD repeat-contai 91.8 6.7 0.00023 35.0 23.3 184 107-347 111-298 (401)
38 4e54_B DNA damage-binding prot 91.8 7.3 0.00025 35.2 16.4 149 96-279 130-282 (435)
39 3q7m_A Lipoprotein YFGL, BAMB; 91.1 5.9 0.0002 35.0 14.5 115 201-348 48-168 (376)
40 3v9f_A Two-component system se 89.9 16 0.00056 36.0 20.4 186 108-349 426-618 (781)
41 3dsm_A Uncharacterized protein 89.8 9.3 0.00032 33.1 25.0 144 173-350 63-221 (328)
42 3sjl_D Methylamine dehydrogena 89.7 8.8 0.0003 34.5 14.1 121 205-354 236-376 (386)
43 3dwl_C Actin-related protein 2 89.6 10 0.00034 33.2 14.6 196 107-345 31-239 (377)
44 4gga_A P55CDC, cell division c 89.2 12 0.00041 33.5 21.7 147 95-279 114-261 (420)
45 1q7f_A NHL, brain tumor CG1071 88.5 10 0.00034 31.7 24.8 204 95-350 38-246 (286)
46 3mbr_X Glutamine cyclotransfer 88.4 10 0.00034 31.6 18.4 146 172-351 41-189 (243)
47 2ojh_A Uncharacterized protein 87.4 11 0.00038 31.1 20.4 204 93-349 48-265 (297)
48 1l0q_A Surface layer protein; 87.4 14 0.00049 32.3 21.2 192 95-348 82-281 (391)
49 3hfq_A Uncharacterized protein 87.3 14 0.00047 31.9 18.4 125 206-348 50-178 (347)
50 3nol_A Glutamine cyclotransfer 86.7 13 0.00046 31.2 13.9 144 173-350 64-210 (262)
51 1l0q_A Surface layer protein; 86.3 16 0.00056 31.9 22.4 192 92-346 37-237 (391)
52 3e5z_A Putative gluconolactona 85.3 16 0.00054 30.8 21.7 191 107-351 48-255 (296)
53 1ri6_A Putative isomerase YBHE 85.1 17 0.00057 30.9 14.9 113 206-348 48-167 (343)
54 3scy_A Hypothetical bacterial 84.9 19 0.00063 31.3 21.8 116 206-349 221-346 (361)
55 3hfq_A Uncharacterized protein 84.9 18 0.00062 31.1 23.8 152 173-350 161-327 (347)
56 3bws_A Protein LP49; two-domai 84.7 21 0.00072 31.7 19.6 194 97-347 133-339 (433)
57 3bws_A Protein LP49; two-domai 84.6 21 0.00073 31.7 21.1 197 95-348 178-396 (433)
58 1gxr_A ESG1, transducin-like e 84.2 18 0.00062 30.6 23.0 198 94-348 59-261 (337)
59 4aow_A Guanine nucleotide-bind 84.0 19 0.00064 30.6 21.7 142 173-344 194-339 (340)
60 3g4e_A Regucalcin; six bladed 83.9 19 0.00064 30.5 19.3 202 97-351 24-239 (297)
61 4a0p_A LRP6, LRP-6, low-densit 83.8 32 0.0011 33.1 24.7 228 51-345 6-240 (628)
62 3vgz_A Uncharacterized protein 83.1 21 0.00072 30.5 26.9 207 95-347 98-308 (353)
63 3v65_B Low-density lipoprotein 82.8 26 0.00088 31.2 25.1 195 95-349 125-326 (386)
64 3nok_A Glutaminyl cyclase; bet 82.7 21 0.00072 30.2 13.0 141 176-351 77-220 (268)
65 3i2n_A WD repeat-containing pr 82.6 22 0.00075 30.4 19.7 146 173-344 189-355 (357)
66 1p22_A F-BOX/WD-repeat protein 82.5 27 0.00092 31.3 18.9 144 92-279 178-325 (435)
67 3u4y_A Uncharacterized protein 82.4 22 0.00075 30.2 20.6 194 97-345 9-210 (331)
68 1r5m_A SIR4-interacting protei 82.2 25 0.00087 30.8 18.8 145 95-279 215-361 (425)
69 3m0c_C LDL receptor, low-densi 81.4 35 0.0012 33.9 14.8 62 205-279 568-630 (791)
70 1ri6_A Putative isomerase YBHE 81.0 25 0.00084 29.8 25.7 150 173-349 150-317 (343)
71 3dsm_A Uncharacterized protein 80.9 26 0.0009 30.1 21.4 193 96-346 52-257 (328)
72 3mkq_A Coatomer beta'-subunit; 80.5 45 0.0015 32.6 21.1 191 95-347 64-264 (814)
73 3m0c_C LDL receptor, low-densi 80.1 50 0.0017 32.8 26.7 139 173-346 492-636 (791)
74 1q7f_A NHL, brain tumor CG1071 79.2 26 0.00089 29.1 22.9 192 95-342 86-280 (286)
75 4g56_B MGC81050 protein; prote 78.8 33 0.0011 29.9 17.0 198 95-348 103-307 (357)
76 3sov_A LRP-6, low-density lipo 76.6 36 0.0012 29.3 22.2 139 173-348 100-245 (318)
77 4aez_A CDC20, WD repeat-contai 76.4 40 0.0014 29.7 21.5 98 224-347 285-385 (401)
78 1k8k_C P40, ARP2/3 complex 41 76.3 36 0.0012 29.2 23.3 191 107-346 28-237 (372)
79 2ad6_A Methanol dehydrogenase 76.2 30 0.001 32.8 12.2 121 200-348 56-191 (571)
80 3jrp_A Fusion protein of prote 76.0 37 0.0013 29.1 16.7 98 224-344 34-136 (379)
81 2hz6_A Endoplasmic reticulum t 75.6 36 0.0012 30.0 12.0 25 324-348 174-198 (369)
82 3hrp_A Uncharacterized protein 75.1 41 0.0014 30.2 12.4 112 205-348 140-255 (409)
83 4gqb_B Methylosome protein 50; 74.1 43 0.0015 29.0 19.9 197 95-348 91-295 (344)
84 1sq9_A Antiviral protein SKI8; 73.4 46 0.0016 28.9 21.8 67 262-346 199-271 (397)
85 3p5b_L Low density lipoprotein 73.4 51 0.0017 29.5 14.9 60 206-278 257-317 (400)
86 3dwl_C Actin-related protein 2 73.3 29 0.001 30.0 10.9 141 173-343 32-178 (377)
87 2dg1_A DRP35, lactonase; beta 73.0 43 0.0015 28.4 20.9 214 95-351 53-272 (333)
88 3bg1_A Protein SEC13 homolog; 72.8 43 0.0015 28.4 16.6 26 264-292 183-208 (316)
89 2mad_H Methylamine dehydrogena 72.7 50 0.0017 29.1 13.5 70 259-348 279-356 (373)
90 3v64_C Agrin; beta propeller, 72.6 48 0.0017 28.9 26.9 195 94-348 81-282 (349)
91 1npe_A Nidogen, entactin; glyc 71.3 42 0.0014 27.6 22.2 196 94-349 44-246 (267)
92 1sq9_A Antiviral protein SKI8; 71.3 51 0.0017 28.6 16.4 63 224-293 259-330 (397)
93 1yfq_A Cell cycle arrest prote 71.0 47 0.0016 28.1 22.8 207 95-346 65-286 (342)
94 3jro_A Fusion protein of prote 71.0 81 0.0028 30.8 16.4 99 224-344 32-134 (753)
95 4a11_B DNA excision repair pro 70.9 52 0.0018 28.5 20.5 64 99-185 114-177 (408)
96 1kb0_A Quinohemoprotein alcoho 70.5 33 0.0011 33.3 11.2 122 201-348 72-205 (677)
97 1kv9_A Type II quinohemoprotei 70.1 36 0.0012 33.0 11.3 121 201-348 61-193 (668)
98 1r5m_A SIR4-interacting protei 69.9 56 0.0019 28.5 23.7 96 224-348 228-325 (425)
99 3sfz_A APAF-1, apoptotic pepti 69.3 49 0.0017 34.4 13.0 187 107-345 1023-1210(1249)
100 2aq5_A Coronin-1A; WD40 repeat 69.2 59 0.002 28.5 21.6 145 173-349 153-308 (402)
101 1yiq_A Quinohemoprotein alcoho 68.7 32 0.0011 33.5 10.7 122 201-348 65-198 (689)
102 2pm7_B Protein transport prote 68.7 51 0.0017 27.6 21.0 69 259-343 170-239 (297)
103 1rwi_B Serine/threonine-protei 66.9 50 0.0017 26.8 18.7 188 95-344 75-266 (270)
104 3s94_A LRP-6, low-density lipo 66.5 93 0.0032 29.8 23.9 229 51-345 9-246 (619)
105 1evh_A WH1 domain, protein (ME 66.4 15 0.00052 26.4 5.9 43 109-160 11-53 (112)
106 3v65_B Low-density lipoprotein 66.0 71 0.0024 28.3 23.0 141 97-279 87-232 (386)
107 2hqs_A Protein TOLB; TOLB, PAL 65.8 74 0.0025 28.3 21.6 187 109-348 159-350 (415)
108 3odt_A Protein DOA1; ubiquitin 65.7 56 0.0019 27.0 21.4 94 224-347 206-301 (313)
109 1flg_A Protein (quinoprotein e 65.6 89 0.0031 29.6 12.9 127 200-348 62-199 (582)
110 4g56_B MGC81050 protein; prote 65.0 69 0.0024 27.7 18.8 28 95-123 148-175 (357)
111 2oiz_A Aromatic amine dehydrog 64.4 72 0.0025 27.8 13.9 70 259-350 266-342 (361)
112 4a2l_A BT_4663, two-component 64.0 1.1E+02 0.0039 29.9 22.1 143 174-345 377-529 (795)
113 2dg1_A DRP35, lactonase; beta 63.8 67 0.0023 27.1 13.4 115 205-348 54-177 (333)
114 1nir_A Nitrite reductase; hemo 63.6 97 0.0033 28.9 18.8 119 206-346 334-462 (543)
115 3c75_H MADH, methylamine dehyd 63.5 87 0.003 28.4 14.1 70 258-347 330-407 (426)
116 3v64_C Agrin; beta propeller, 62.5 78 0.0027 27.5 23.2 141 97-279 44-189 (349)
117 1gxr_A ESG1, transducin-like e 61.8 70 0.0024 26.7 24.0 191 95-347 106-301 (337)
118 3v7d_B Cell division control p 61.8 88 0.003 27.9 24.1 30 92-123 127-156 (464)
119 4aow_A Guanine nucleotide-bind 61.5 72 0.0025 26.8 18.1 23 97-120 50-72 (340)
120 2hqs_A Protein TOLB; TOLB, PAL 61.2 90 0.0031 27.8 23.3 185 109-349 203-394 (415)
121 2pm9_A Protein WEB1, protein t 61.1 83 0.0028 27.4 18.4 97 224-345 241-340 (416)
122 2ovr_B FBW7, F-BOX/WD repeat p 60.7 92 0.0031 27.7 25.5 111 203-347 285-396 (445)
123 3vgz_A Uncharacterized protein 59.3 81 0.0028 26.6 16.6 145 173-348 68-221 (353)
124 3sfz_A APAF-1, apoptotic pepti 58.8 1.7E+02 0.0059 30.3 23.0 203 94-349 623-835 (1249)
125 3ow8_A WD repeat-containing pr 58.7 84 0.0029 26.6 22.7 108 206-347 175-284 (321)
126 1rwi_B Serine/threonine-protei 58.0 73 0.0025 25.8 19.7 195 92-348 29-228 (270)
127 1k8k_C P40, ARP2/3 complex 41 57.8 88 0.003 26.6 20.2 68 258-348 213-282 (372)
128 2z2n_A Virginiamycin B lyase; 57.7 78 0.0027 25.9 24.0 198 92-351 62-263 (299)
129 1n7d_A LDL receptor, low-densi 57.3 50 0.0017 32.2 9.7 56 201-266 543-602 (699)
130 4e54_B DNA damage-binding prot 57.1 1.1E+02 0.0036 27.3 16.7 24 324-347 412-435 (435)
131 3vl1_A 26S proteasome regulato 56.5 1E+02 0.0035 26.9 23.4 191 95-344 106-324 (420)
132 3sov_A LRP-6, low-density lipo 56.1 97 0.0033 26.5 13.5 60 206-279 177-236 (318)
133 3vl1_A 26S proteasome regulato 56.0 1E+02 0.0035 26.8 22.0 103 224-342 314-419 (420)
134 1jmx_B Amine dehydrogenase; ox 55.7 92 0.0031 26.2 11.7 63 205-278 9-73 (349)
135 1ijq_A LDL receptor, low-densi 55.3 97 0.0033 26.3 21.9 182 108-348 9-201 (316)
136 3p5b_L Low density lipoprotein 55.2 1.1E+02 0.0039 27.1 26.8 157 141-345 161-323 (400)
137 2qc5_A Streptogramin B lactona 55.2 86 0.0029 25.7 20.9 185 95-341 112-299 (300)
138 1w6s_A Methanol dehydrogenase 55.0 1E+02 0.0035 29.4 11.2 122 200-348 56-197 (599)
139 2ynn_A Coatomer subunit beta'; 55.0 92 0.0032 26.0 20.3 67 259-348 198-265 (304)
140 3fm0_A Protein CIAO1; WDR39,SG 54.7 1E+02 0.0035 26.4 19.7 161 95-293 25-191 (345)
141 3v9f_A Two-component system se 54.5 1.6E+02 0.0056 28.7 23.0 199 97-349 373-575 (781)
142 3g4e_A Regucalcin; six bladed 53.8 97 0.0033 25.9 14.6 47 206-265 24-71 (297)
143 2xzh_A Clathrin heavy chain 1; 53.8 42 0.0014 29.5 7.4 27 323-349 271-297 (365)
144 1egx_A VAsp, vasodilator-stimu 53.1 34 0.0011 24.7 5.8 44 109-160 11-54 (115)
145 3iuj_A Prolyl endopeptidase; h 52.8 1.7E+02 0.0057 28.2 19.7 117 204-349 289-412 (693)
146 2ghs_A AGR_C_1268P; regucalcin 50.5 1.2E+02 0.004 25.8 14.1 47 206-265 60-107 (326)
147 3zwl_B Eukaryotic translation 50.4 1.1E+02 0.0039 25.7 23.4 69 259-348 187-255 (369)
148 3bg1_A Protein SEC13 homolog; 50.2 1.1E+02 0.0039 25.6 18.8 71 263-350 231-302 (316)
149 2hz6_A Endoplasmic reticulum t 49.8 4.7 0.00016 35.9 0.9 25 203-234 6-30 (369)
150 2pm7_B Protein transport prote 49.4 1.1E+02 0.0038 25.3 15.6 98 224-343 32-133 (297)
151 1yr2_A Prolyl oligopeptidase; 49.0 1.9E+02 0.0066 28.0 20.0 145 173-348 293-447 (741)
152 4a11_B DNA excision repair pro 48.8 1.3E+02 0.0044 25.8 18.8 22 324-345 258-279 (408)
153 1ijq_A LDL receptor, low-densi 48.6 1.3E+02 0.0043 25.6 26.4 196 94-348 38-245 (316)
154 4ery_A WD repeat-containing pr 48.5 1.2E+02 0.004 25.2 23.6 183 107-347 43-228 (312)
155 2fp8_A Strictosidine synthase; 48.0 1.3E+02 0.0043 25.5 12.9 98 173-278 206-312 (322)
156 3s94_A LRP-6, low-density lipo 46.5 2E+02 0.0069 27.4 28.3 194 94-347 357-556 (619)
157 1n7d_A LDL receptor, low-densi 46.3 78 0.0027 30.8 9.1 56 173-235 561-617 (699)
158 2iwa_A Glutamine cyclotransfer 45.9 1.3E+02 0.0045 25.1 19.2 146 172-351 42-191 (266)
159 1ddw_A GLGF-domain protein hom 45.4 62 0.0021 23.4 6.2 41 108-159 10-51 (120)
160 3dr2_A Exported gluconolactona 44.3 1.4E+02 0.0047 24.9 10.7 33 203-243 246-278 (305)
161 2bkl_A Prolyl endopeptidase; m 42.5 2.4E+02 0.008 27.1 22.1 194 109-349 202-404 (695)
162 1yiq_A Quinohemoprotein alcoho 42.5 2.4E+02 0.0083 27.2 15.3 56 175-238 81-148 (689)
163 4a2l_A BT_4663, two-component 42.2 2.5E+02 0.0087 27.4 24.1 148 175-349 236-393 (795)
164 3scy_A Hypothetical bacterial 41.7 1.6E+02 0.0056 25.0 18.1 76 258-349 221-300 (361)
165 2p4o_A Hypothetical protein; p 41.3 1.6E+02 0.0054 24.7 15.3 106 206-344 42-149 (306)
166 2fp8_A Strictosidine synthase; 39.3 1.7E+02 0.0059 24.6 13.1 28 206-239 29-56 (322)
167 3zwl_B Eukaryotic translation 39.3 1.7E+02 0.0058 24.5 19.2 104 224-342 97-206 (369)
168 1qks_A Cytochrome CD1 nitrite 39.2 2.5E+02 0.0085 26.4 18.6 218 92-348 303-544 (567)
169 2ojh_A Uncharacterized protein 38.8 1.5E+02 0.0052 23.8 20.5 139 107-279 20-160 (297)
170 1got_B GT-beta; complex (GTP-b 38.5 1.8E+02 0.0062 24.6 23.6 95 224-345 165-260 (340)
171 4a0p_A LRP6, LRP-6, low-densit 37.5 2.8E+02 0.0095 26.5 22.6 134 108-279 14-153 (628)
172 2pbi_B Guanine nucleotide-bind 37.3 2E+02 0.0067 24.6 21.4 136 107-279 174-315 (354)
173 2kwv_A RAD30 homolog B, DNA po 37.3 16 0.00055 21.2 1.5 17 1-17 23-39 (48)
174 3hxj_A Pyrrolo-quinoline quino 37.1 1.8E+02 0.0061 24.2 10.4 27 324-350 266-292 (330)
175 1vyh_C Platelet-activating fac 36.8 2.2E+02 0.0074 25.0 22.5 65 259-345 308-372 (410)
176 2aq5_A Coronin-1A; WD40 repeat 36.5 2.1E+02 0.0072 24.8 21.8 186 107-344 55-256 (402)
177 3mkq_A Coatomer beta'-subunit; 35.9 3.1E+02 0.01 26.5 23.2 182 107-345 33-220 (814)
178 2jp2_A Spred-2, sprouty-relate 35.9 89 0.003 22.8 5.8 44 109-160 20-66 (126)
179 1bpo_A Protein (clathrin); cla 35.9 1.1E+02 0.0038 28.0 7.5 26 323-348 270-295 (494)
180 3fm0_A Protein CIAO1; WDR39,SG 35.6 2E+02 0.007 24.3 16.9 145 173-347 37-186 (345)
181 1ms9_A Trans-sialidase; trans- 34.9 1.7E+02 0.0058 28.2 9.1 83 203-290 198-281 (648)
182 1npe_A Nidogen, entactin; glyc 34.6 1.8E+02 0.0063 23.5 16.1 159 93-294 86-247 (267)
183 1i2h_A PSD-ZIP45(homer-1C/VESL 34.5 91 0.0031 24.1 5.9 40 109-159 16-56 (168)
184 3ow8_A WD repeat-containing pr 34.0 2.1E+02 0.0072 24.0 22.6 95 224-347 145-242 (321)
185 3lrv_A PRE-mRNA-splicing facto 33.9 2.1E+02 0.0073 24.1 13.6 23 324-346 182-205 (343)
186 2qc5_A Streptogramin B lactona 33.5 1.9E+02 0.0066 23.4 24.7 196 92-349 25-224 (300)
187 3u4y_A Uncharacterized protein 32.7 2.1E+02 0.0073 23.7 15.2 107 207-348 10-123 (331)
188 2ecf_A Dipeptidyl peptidase IV 32.6 3.3E+02 0.011 25.9 21.2 142 110-279 264-413 (741)
189 2qe8_A Uncharacterized protein 32.1 2.2E+02 0.0075 24.2 9.0 63 203-266 72-139 (343)
190 2dk7_A Transcription elongatio 32.1 47 0.0016 21.6 3.3 22 324-345 21-42 (73)
191 1nir_A Nitrite reductase; hemo 32.1 3.1E+02 0.011 25.4 21.0 196 95-348 146-361 (543)
192 1kb0_A Quinohemoprotein alcoho 31.7 3.5E+02 0.012 25.9 13.7 56 174-237 87-154 (677)
193 1pjx_A Dfpase, DIISOPROPYLFLUO 30.8 2.2E+02 0.0076 23.3 18.7 200 107-349 44-264 (314)
194 4ggc_A P55CDC, cell division c 30.2 2.2E+02 0.0077 23.2 22.1 27 95-124 34-60 (318)
195 3odt_A Protein DOA1; ubiquitin 29.8 2.2E+02 0.0077 23.1 22.3 23 324-346 196-218 (313)
196 3dr2_A Exported gluconolactona 29.1 2.5E+02 0.0084 23.3 18.8 28 324-352 250-277 (305)
197 1pgu_A Actin interacting prote 28.9 3.4E+02 0.012 24.8 20.4 134 173-343 466-615 (615)
198 1erj_A Transcriptional repress 28.8 2.8E+02 0.0097 23.9 25.2 150 95-279 132-287 (393)
199 3amr_A 3-phytase; beta-propell 28.7 3E+02 0.01 24.1 19.9 149 173-341 49-209 (355)
200 4ggc_A P55CDC, cell division c 28.5 2.4E+02 0.0082 23.0 14.7 50 224-279 265-315 (318)
201 2xyi_A Probable histone-bindin 28.0 3.1E+02 0.011 24.1 17.2 59 209-280 292-354 (430)
202 3sil_A Sialidase; glycosidase, 27.8 1.8E+02 0.0063 25.7 7.7 80 203-289 180-263 (379)
203 3hrp_A Uncharacterized protein 27.3 3.2E+02 0.011 24.1 23.2 212 92-350 136-362 (409)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 26.8 2.6E+02 0.0089 22.9 12.3 54 206-266 28-90 (314)
205 3e5z_A Putative gluconolactona 26.7 2.6E+02 0.009 22.8 13.5 58 206-277 38-97 (296)
206 2vdu_B TRNA (guanine-N(7)-)-me 26.4 3.4E+02 0.011 24.0 22.9 209 91-348 9-277 (450)
207 3lrv_A PRE-mRNA-splicing facto 25.8 3E+02 0.01 23.1 19.5 152 91-279 88-244 (343)
208 4gqb_B Methylosome protein 50; 25.1 3.2E+02 0.011 23.3 20.6 193 95-345 136-334 (344)
209 1pgu_A Actin interacting prote 24.9 4E+02 0.014 24.3 15.7 51 224-279 468-519 (615)
210 1q67_A Decapping protein invol 24.7 75 0.0026 25.5 3.8 30 325-354 36-65 (231)
211 1xod_A Spred1; sprouty, EVH1, 24.2 96 0.0033 22.3 4.2 41 109-159 11-56 (118)
212 2be1_A Serine/threonine-protei 24.1 1.8E+02 0.0061 25.3 6.7 26 324-349 112-137 (339)
213 2be1_A Serine/threonine-protei 24.1 1.4E+02 0.0047 26.1 6.0 24 205-235 110-133 (339)
214 3mmy_A MRNA export factor; mRN 23.5 3.2E+02 0.011 22.7 14.1 86 258-365 53-138 (368)
215 3hxj_A Pyrrolo-quinoline quino 23.3 3.1E+02 0.011 22.5 8.7 19 324-342 306-324 (330)
216 1w6s_A Methanol dehydrogenase 23.0 4E+02 0.014 25.2 9.5 79 174-267 453-535 (599)
217 2ghs_A AGR_C_1268P; regucalcin 22.3 3.5E+02 0.012 22.7 22.1 204 95-351 58-269 (326)
218 2ynn_A Coatomer subunit beta'; 21.9 3.3E+02 0.011 22.3 16.6 93 224-344 36-130 (304)
219 4ery_A WD repeat-containing pr 21.8 3.3E+02 0.011 22.3 21.4 137 173-346 44-184 (312)
220 3k26_A Polycomb protein EED; W 21.6 3.5E+02 0.012 22.5 14.4 115 206-348 34-153 (366)
221 3iz6_a 40S ribosomal protein R 21.3 3.9E+02 0.013 22.9 23.7 192 107-344 178-377 (380)
222 2lyd_A Decapping protein 1; DC 21.1 1E+02 0.0035 22.8 3.8 29 325-353 30-58 (134)
223 1flg_A Protein (quinoprotein e 21.0 2.9E+02 0.0099 26.0 8.1 25 324-348 118-142 (582)
No 1
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.56 E-value=9.8e-12 Score=111.41 Aligned_cols=197 Identities=12% Similarity=0.182 Sum_probs=132.5
Q ss_pred eEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCceEEc
Q 036467 110 DIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKWKKI 189 (369)
Q Consensus 110 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W~~~ 189 (369)
.++++||.|++|..+|+++..+.. .....+ ++ +++.+.... .+.......+++|++.+++|+.+
T Consensus 79 ~~~~~d~~~~~W~~~~~~p~~r~~-----~~~~~~------~~-~iyv~GG~~----~~~~~~~~~~~~yd~~~~~W~~~ 142 (318)
T 2woz_A 79 YFFQLDNVSSEWVGLPPLPSARCL-----FGLGEV------DD-KIYVVAGKD----LQTEASLDSVLCYDPVAAKWSEV 142 (318)
T ss_dssp EEEEEETTTTEEEECSCBSSCBCS-----CEEEEE------TT-EEEEEEEEB----TTTCCEEEEEEEEETTTTEEEEE
T ss_pred cEEEEeCCCCcEEECCCCCccccc-----cceEEE------CC-EEEEEcCcc----CCCCcccceEEEEeCCCCCEeEC
Confidence 389999999999999988765432 111111 12 444444310 01223456799999999999999
Q ss_pred cCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCceeEEEEECCcEEEEEecC
Q 036467 190 NGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVFRGEFAMFHMWR 268 (369)
Q Consensus 190 ~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~G~L~~~~~~~ 268 (369)
..+|.....+..+..+|.||.+++..........+..||+.+++|+.+ ++|... .....+..+|+|+++....
T Consensus 143 -~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv~GG~~ 216 (318)
T 2woz_A 143 -KNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR-----SMFGVAIHKGKIVIAGGVT 216 (318)
T ss_dssp -CCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC-----BSCEEEEETTEEEEEEEEE
T ss_pred -CCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc-----ccceEEEECCEEEEEcCcC
Confidence 778877666667889999999997643222335799999999999999 555443 3456678899999998764
Q ss_pred CC--eEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECC--------------
Q 036467 269 ED--RVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGD-------------- 332 (369)
Q Consensus 269 ~~--~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------------- 332 (369)
.. .-++|+++- ...+|+++..++.... ... ..+ . + ++|++..+.
T Consensus 217 ~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~---------~~~-~~~----~-~---~~i~v~GG~~~~~~~~~~~~~~~ 276 (318)
T 2woz_A 217 EDGLSASVEAFDL--KTNKWEVMTEFPQERS---------SIS-LVS----L-A---GSLYAIGGFAMIQLESKEFAPTE 276 (318)
T ss_dssp TTEEEEEEEEEET--TTCCEEECCCCSSCCB---------SCE-EEE----E-T---TEEEEECCBCCBC----CCBCCB
T ss_pred CCCccceEEEEEC--CCCeEEECCCCCCccc---------ceE-EEE----E-C---CEEEEECCeeccCCCCceeccce
Confidence 32 346777775 3467999765443221 111 122 2 3 677776431
Q ss_pred -CeEEEEECCCCeEEEe
Q 036467 333 -GELILYDFENEIATDF 348 (369)
Q Consensus 333 -~~~~~ydl~~~~~~~v 348 (369)
..+..||+++++|+++
T Consensus 277 ~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 277 VNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp CCCEEEEETTTTEEEEE
T ss_pred eeeEEEEeCCCCEehhh
Confidence 2489999999999998
No 2
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.55 E-value=4.3e-12 Score=113.62 Aligned_cols=198 Identities=12% Similarity=0.089 Sum_probs=134.1
Q ss_pred eEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCceEEc
Q 036467 110 DIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKWKKI 189 (369)
Q Consensus 110 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W~~~ 189 (369)
.++++||.|++|..+|+++.++.. .....+ ++ +++.+.... ..+.......+++|+..+++|+.+
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r~~-----~~~~~~------~~-~lyv~GG~~---~~~~~~~~~~~~~~d~~~~~W~~~ 132 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPRCL-----FGLGEA------LN-SIYVVGGRE---IKDGERCLDSVMCYDRLSFKWGES 132 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCEES-----CEEEEE------TT-EEEEECCEE---SSTTCCBCCCEEEEETTTTEEEEC
T ss_pred ceEEecCCCCeEEECCCCCcchhc-----eeEEEE------CC-EEEEEeCCc---CCCCCcccceEEEECCCCCcEeEC
Confidence 489999999999999988764322 111111 11 444444310 001234456799999999999999
Q ss_pred cCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCceeEEEEECCcEEEEEecC
Q 036467 190 NGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVFRGEFAMFHMWR 268 (369)
Q Consensus 190 ~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~G~L~~~~~~~ 268 (369)
..+|.....+..+.++|.+|.+++..........+..||+.+++|+.+ ++|... .....+..+|+|+++....
T Consensus 133 -~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv~GG~~ 206 (315)
T 4asc_A 133 -DPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTAR-----SLFGATVHDGRIIVAAGVT 206 (315)
T ss_dssp -CCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCC-----BSCEEEEETTEEEEEEEEC
T ss_pred -CCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCch-----hceEEEEECCEEEEEeccC
Confidence 778877666667889999999998743333345899999999999998 556543 3456778899999998864
Q ss_pred CC--eEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECC--------------
Q 036467 269 ED--RVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGD-------------- 332 (369)
Q Consensus 269 ~~--~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------------- 332 (369)
.. .-++|+++- ...+|+.+..++.... ... ..+ . + ++|++..+.
T Consensus 207 ~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~---------~~~-~~~----~-~---~~l~v~GG~~~~~~~~~~~~~~~ 266 (315)
T 4asc_A 207 DTGLTSSAEVYSI--TDNKWAPFEAFPQERS---------SLS-LVS----L-V---GTLYAIGGFATLETESGELVPTE 266 (315)
T ss_dssp SSSEEEEEEEEET--TTTEEEEECCCSSCCB---------SCE-EEE----E-T---TEEEEEEEEEEEECTTSCEEEEE
T ss_pred CCCccceEEEEEC--CCCeEEECCCCCCccc---------cee-EEE----E-C---CEEEEECCccccCcCCccccccc
Confidence 32 346788875 3467999865432221 111 112 2 3 577776431
Q ss_pred -CeEEEEECCCCeEEEe
Q 036467 333 -GELILYDFENEIATDF 348 (369)
Q Consensus 333 -~~~~~ydl~~~~~~~v 348 (369)
..+..||+++++|+.+
T Consensus 267 ~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 267 LNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp EEEEEEEETTTTEEEEE
T ss_pred cCcEEEecCCCChhhhh
Confidence 2388999999999998
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.50 E-value=7e-12 Score=111.68 Aligned_cols=216 Identities=10% Similarity=-0.006 Sum_probs=142.5
Q ss_pred EEeeecccEEEeec---cCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCccc
Q 036467 92 ISGSCNGLLCISDQ---SCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVD 168 (369)
Q Consensus 92 ~~~s~~GLl~~~~~---~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~ 168 (369)
.....+|.|.+..+ ....++.++||.|++|..+|+++..+.. ...+.+ + =+++.+.. ...
T Consensus 50 ~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-----~~~~~~--~-----~~iyv~GG-----~~~ 112 (306)
T 3ii7_A 50 ACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDS-----LAACAA--E-----GKIYTSGG-----SEV 112 (306)
T ss_dssp EEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBS-----CEEEEE--T-----TEEEEECC-----BBT
T ss_pred EEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccc-----eeEEEE--C-----CEEEEECC-----CCC
Confidence 33345666655442 1346799999999999999887765432 111111 1 14544443 111
Q ss_pred CCCCcceEEEEEcCCCceEEccCCCCeeeccCCcEEECceEEEEeecCCCCCc---eeEEEEEECCCcceeee-CCCCCc
Q 036467 169 IDSYECEARVYSLASDKWKKINGGIPYHISSRAAVCFNECLIWKASRGLGRGM---TVLVVAFDMNREEFKEI-HRPEYK 244 (369)
Q Consensus 169 ~~~~~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~---~~~il~fD~~~e~~~~i-~~P~~~ 244 (369)
.......+++|++.+++|+.+ ..+|.....+..+.++|.+|.+++....... ...+..||+.+++|+.+ ++|...
T Consensus 113 ~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 191 (306)
T 3ii7_A 113 GNSALYLFECYDTRTESWHTK-PSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEAR 191 (306)
T ss_dssp TBSCCCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCC
T ss_pred CCcEeeeEEEEeCCCCceEeC-CCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchh
Confidence 223456799999999999999 7888776666668899999999975432211 35799999999999999 555543
Q ss_pred CCCCCceeEEEEECCcEEEEEecCCC--eEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCC
Q 036467 245 DSHDKCQIEVGVFRGEFAMFHMWRED--RVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNG 322 (369)
Q Consensus 245 ~~~~~~~~~l~~~~G~L~~~~~~~~~--~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (369)
....++..+|+|+++...... .-++|+++- ...+|+.+..++.... .....+ . +
T Consensus 192 -----~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~----------~~~~~~----~-~-- 247 (306)
T 3ii7_A 192 -----KNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDI--KLNEWKMVSPMPWKGV----------TVKCAA----V-G-- 247 (306)
T ss_dssp -----BSCEEEEETTEEEEECCEETTEEBCCEEEEET--TTTEEEECCCCSCCBS----------CCEEEE----E-T--
T ss_pred -----hcceEEEECCEEEEEeCCCCCCCCceEEEeeC--CCCcEEECCCCCCCcc----------ceeEEE----E-C--
Confidence 345677889999999775321 235677765 3467998754443221 111222 2 3
Q ss_pred CCeEEEEECC------CeEEEEECCCCeEEEeEE
Q 036467 323 KNFLLIEKGD------GELILYDFENEIATDFKI 350 (369)
Q Consensus 323 ~~~i~~~~~~------~~~~~ydl~~~~~~~v~~ 350 (369)
++|++..+. ..+..||+++++|+.+.-
T Consensus 248 -~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 280 (306)
T 3ii7_A 248 -SIVYVLAGFQGVGRLGHILEYNTETDKWVANSK 280 (306)
T ss_dssp -TEEEEEECBCSSSBCCEEEEEETTTTEEEEEEE
T ss_pred -CEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCC
Confidence 678887642 349999999999999853
No 4
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.49 E-value=1.6e-11 Score=109.19 Aligned_cols=212 Identities=12% Similarity=0.131 Sum_probs=140.3
Q ss_pred eeecccEEEeec----cCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccC
Q 036467 94 GSCNGLLCISDQ----SCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDI 169 (369)
Q Consensus 94 ~s~~GLl~~~~~----~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 169 (369)
...+|.|.+..+ ....++.++||.|++|..+|+++..+.. ...+.+ + + +++.+... +.
T Consensus 58 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-----~~~~~~--~----~-~iyv~GG~------~~ 119 (302)
T 2xn4_A 58 VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRST-----LGAAVL--N----G-LLYAVGGF------DG 119 (302)
T ss_dssp EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS-----CEEEEE--T----T-EEEEEEEE------CS
T ss_pred EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccc-----eEEEEE--C----C-EEEEEcCC------CC
Confidence 345666655442 1235799999999999999988765432 111111 1 2 44444431 12
Q ss_pred CCCcceEEEEEcCCCceEEccCCCCeeeccCCcEEECceEEEEeecCCCC-CceeEEEEEECCCcceeee-CCCCCcCCC
Q 036467 170 DSYECEARVYSLASDKWKKINGGIPYHISSRAAVCFNECLIWKASRGLGR-GMTVLVVAFDMNREEFKEI-HRPEYKDSH 247 (369)
Q Consensus 170 ~~~~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~-~~~~~il~fD~~~e~~~~i-~~P~~~~~~ 247 (369)
......+++|++.+++|+.+ ..+|.....+..+.++|.+|.+++..... .....+..||+.+++|+.+ ++|...
T Consensus 120 ~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--- 195 (302)
T 2xn4_A 120 STGLSSVEAYNIKSNEWFHV-APMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRR--- 195 (302)
T ss_dssp SCEEEEEEEEETTTTEEEEE-CCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCC---
T ss_pred CccCceEEEEeCCCCeEeec-CCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccc---
Confidence 23346799999999999999 77877665666688999999998764321 1134789999999999998 555443
Q ss_pred CCceeEEEEECCcEEEEEecCCC--eEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCe
Q 036467 248 DKCQIEVGVFRGEFAMFHMWRED--RVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNF 325 (369)
Q Consensus 248 ~~~~~~l~~~~G~L~~~~~~~~~--~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (369)
....++..+|+|+++...... .-++|+++- ...+|+.+..++.... ... ..+ . + ++
T Consensus 196 --~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~--~~~~W~~~~~~~~~r~---------~~~-~~~----~-~---~~ 253 (302)
T 2xn4_A 196 --SGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDP--TTNAWRQVADMNMCRR---------NAG-VCA----V-N---GL 253 (302)
T ss_dssp --BSCEEEEETTEEEEECCBSSSSBCCCEEEEET--TTTEEEEECCCSSCCB---------SCE-EEE----E-T---TE
T ss_pred --ccccEEEECCEEEEECCCCCCcccceEEEEeC--CCCCEeeCCCCCCccc---------cCe-EEE----E-C---CE
Confidence 345677889999999876431 235777775 3467998764442211 111 222 2 3 67
Q ss_pred EEEEECC------CeEEEEECCCCeEEEeE
Q 036467 326 LLIEKGD------GELILYDFENEIATDFK 349 (369)
Q Consensus 326 i~~~~~~------~~~~~ydl~~~~~~~v~ 349 (369)
|++..+. ..+..||+++++|+.+.
T Consensus 254 i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 254 LYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp EEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred EEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 8877542 23999999999999985
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.47 E-value=1.9e-11 Score=108.47 Aligned_cols=212 Identities=10% Similarity=0.049 Sum_probs=139.9
Q ss_pred EeeecccEEEeec----cCCceEEEEcCCccc---eeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCC
Q 036467 93 SGSCNGLLCISDQ----SCNEDIFLFNPSTKK---YKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKP 165 (369)
Q Consensus 93 ~~s~~GLl~~~~~----~~~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~ 165 (369)
....+|.|.+..+ ....+++++||.|++ |..+|+++..+.. ...+.+ + + +++.+..
T Consensus 58 ~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~-----~~~~~~--~----~-~lyv~GG----- 120 (301)
T 2vpj_A 58 SVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGL-----AGATTL--G----D-MIYVSGG----- 120 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBS-----CEEEEE--T----T-EEEEECC-----
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccc-----eeEEEE--C----C-EEEEEcc-----
Confidence 3445666655432 123579999999999 9999988765432 111111 1 2 4555443
Q ss_pred cccCCCCcceEEEEEcCCCceEEccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCc
Q 036467 166 FVDIDSYECEARVYSLASDKWKKINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYK 244 (369)
Q Consensus 166 ~~~~~~~~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~ 244 (369)
. +.......+++|+..+++|+.+ ..+|.....+..+.++|.+|.+++.... .....+..||+.+++|+.+ ++|...
T Consensus 121 ~-~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r 197 (301)
T 2vpj_A 121 F-DGSRRHTSMERYDPNIDQWSML-GDMQTAREGAGLVVASGVIYCLGGYDGL-NILNSVEKYDPHTGHWTNVTPMATKR 197 (301)
T ss_dssp B-CSSCBCCEEEEEETTTTEEEEE-EECSSCCBSCEEEEETTEEEEECCBCSS-CBCCCEEEEETTTTEEEEECCCSSCC
T ss_pred c-CCCcccceEEEEcCCCCeEEEC-CCCCCCcccceEEEECCEEEEECCCCCC-cccceEEEEeCCCCcEEeCCCCCccc
Confidence 1 1122356799999999999999 7777665556668889999999876432 1235799999999999998 555543
Q ss_pred CCCCCceeEEEEECCcEEEEEecCCC--eEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCC
Q 036467 245 DSHDKCQIEVGVFRGEFAMFHMWRED--RVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNG 322 (369)
Q Consensus 245 ~~~~~~~~~l~~~~G~L~~~~~~~~~--~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (369)
....++..+|+|+++...... .-++|+++- ...+|+.+..++.... .....+ . +
T Consensus 198 -----~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~--~~~~W~~~~~~p~~r~----------~~~~~~----~-~-- 253 (301)
T 2vpj_A 198 -----SGAGVALLNDHIYVVGGFDGTAHLSSVEAYNI--RTDSWTTVTSMTTPRC----------YVGATV----L-R-- 253 (301)
T ss_dssp -----BSCEEEEETTEEEEECCBCSSSBCCCEEEEET--TTTEEEEECCCSSCCB----------SCEEEE----E-T--
T ss_pred -----ccceEEEECCEEEEEeCCCCCcccceEEEEeC--CCCcEEECCCCCCccc----------ceeEEE----E-C--
Confidence 345677889999999876421 335677764 3467998754433221 111222 2 3
Q ss_pred CCeEEEEECC------CeEEEEECCCCeEEEeE
Q 036467 323 KNFLLIEKGD------GELILYDFENEIATDFK 349 (369)
Q Consensus 323 ~~~i~~~~~~------~~~~~ydl~~~~~~~v~ 349 (369)
++|++..+. ..+..||+++++|+.+.
T Consensus 254 -~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 254 -GRLYAIAGYDGNSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp -TEEEEECCBCSSSBEEEEEEEETTTTEEEEEE
T ss_pred -CEEEEEcCcCCCcccccEEEEcCCCCeEEEcC
Confidence 678777542 24899999999999985
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.46 E-value=2.5e-11 Score=108.25 Aligned_cols=213 Identities=11% Similarity=0.059 Sum_probs=139.7
Q ss_pred EeeecccEEEeec--------cCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCC
Q 036467 93 SGSCNGLLCISDQ--------SCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDK 164 (369)
Q Consensus 93 ~~s~~GLl~~~~~--------~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~ 164 (369)
....+|.|.+..+ ....+++++||.|++|..+|+++..+.. .....+ + + +++.+...
T Consensus 66 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-----~~~~~~--~----~-~iyv~GG~--- 130 (308)
T 1zgk_A 66 GCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNR-----IGVGVI--D----G-HIYAVGGS--- 130 (308)
T ss_dssp EEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBT-----CEEEEE--T----T-EEEEECCE---
T ss_pred EEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccc-----cEEEEE--C----C-EEEEEcCC---
Confidence 3345666655432 1235789999999999999988765432 121111 1 1 44444331
Q ss_pred CcccCCCCcceEEEEEcCCCceEEccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCC
Q 036467 165 PFVDIDSYECEARVYSLASDKWKKINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEY 243 (369)
Q Consensus 165 ~~~~~~~~~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~ 243 (369)
+.......+++|++.+++|+.+ ..+|.....+..+.++|.+|.+++..... ....+..||+.+++|+.+ ++|..
T Consensus 131 ---~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p~~ 205 (308)
T 1zgk_A 131 ---HGCIHHNSVERYEPERDEWHLV-APMLTRRIGVGVAVLNRLLYAVGGFDGTN-RLNSAECYYPERNEWRMITAMNTI 205 (308)
T ss_dssp ---ETTEECCCEEEEETTTTEEEEC-CCCSSCCBSCEEEEETTEEEEECCBCSSC-BCCCEEEEETTTTEEEECCCCSSC
T ss_pred ---CCCcccccEEEECCCCCeEeEC-CCCCccccceEEEEECCEEEEEeCCCCCC-cCceEEEEeCCCCeEeeCCCCCCc
Confidence 1122345799999999999999 77777666666688899999998765322 235799999999999998 45544
Q ss_pred cCCCCCceeEEEEECCcEEEEEecCC--CeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCC
Q 036467 244 KDSHDKCQIEVGVFRGEFAMFHMWRE--DRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGN 321 (369)
Q Consensus 244 ~~~~~~~~~~l~~~~G~L~~~~~~~~--~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (369)
. .....+..+|+|+++..... ..-++|+++- ...+|+++..++.... ... ..+ . +
T Consensus 206 r-----~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~--~~~~W~~~~~~p~~r~---------~~~-~~~----~-~- 262 (308)
T 1zgk_A 206 R-----SGAGVCVLHNCIYAAGGYDGQDQLNSVERYDV--ETETWTFVAPMKHRRS---------ALG-ITV----H-Q- 262 (308)
T ss_dssp C-----BSCEEEEETTEEEEECCBCSSSBCCCEEEEET--TTTEEEECCCCSSCCB---------SCE-EEE----E-T-
T ss_pred c-----ccceEEEECCEEEEEeCCCCCCccceEEEEeC--CCCcEEECCCCCCCcc---------ceE-EEE----E-C-
Confidence 3 34566778999999987642 1345777765 3467998764432211 111 122 2 3
Q ss_pred CCCeEEEEECC------CeEEEEECCCCeEEEeEE
Q 036467 322 GKNFLLIEKGD------GELILYDFENEIATDFKI 350 (369)
Q Consensus 322 ~~~~i~~~~~~------~~~~~ydl~~~~~~~v~~ 350 (369)
++|++..+. ..+..||+++++|+.+.-
T Consensus 263 --~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 295 (308)
T 1zgk_A 263 --GRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTR 295 (308)
T ss_dssp --TEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE
T ss_pred --CEEEEEcCcCCCcccceEEEEcCCCCEEeecCC
Confidence 678877531 349999999999999854
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.43 E-value=2.5e-11 Score=108.09 Aligned_cols=197 Identities=14% Similarity=0.074 Sum_probs=133.8
Q ss_pred CceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCceE
Q 036467 108 NEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKWK 187 (369)
Q Consensus 108 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W~ 187 (369)
..++.++||.+++|..+++++..+.. ...+.+ ++ +++.+.. . .......+++|+..+++|+
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~-----~~~~~~------~~-~lyv~GG-----~--~~~~~~~~~~~d~~~~~W~ 83 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRD-----AACVFW------DN-VVYILGG-----S--QLFPIKRMDCYNVVKDSWY 83 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBS-----CEEEEE------TT-EEEEECC-----B--SSSBCCEEEEEETTTTEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccce-----eEEEEE------CC-EEEEEeC-----C--CCCCcceEEEEeCCCCeEE
Confidence 46799999999999999988765432 111111 12 3444433 1 1234567999999999999
Q ss_pred EccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCceeEEEEECCcEEEEEe
Q 036467 188 KINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVFRGEFAMFHM 266 (369)
Q Consensus 188 ~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~G~L~~~~~ 266 (369)
.+ ..+|.....+..+.++|.+|.+++..........+..||+.+++|+.+ ++|... .....+..+|+|+++..
T Consensus 84 ~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv~GG 157 (306)
T 3ii7_A 84 SK-LGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR-----CSHGMVEANGLIYVCGG 157 (306)
T ss_dssp EE-ECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCC-----BSCEEEEETTEEEEECC
T ss_pred EC-CCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCc-----ceeEEEEECCEEEEECC
Confidence 99 778876666666889999999998653333345799999999999998 556543 34566778999999987
Q ss_pred cCC--C----eEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECC------Ce
Q 036467 267 WRE--D----RVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGD------GE 334 (369)
Q Consensus 267 ~~~--~----~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~ 334 (369)
... . .-++|+++- ...+|+++..++.... .....+ . + ++|++..+. ..
T Consensus 158 ~~~~~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~----------~~~~~~----~-~---~~i~v~GG~~~~~~~~~ 217 (306)
T 3ii7_A 158 SLGNNVSGRVLNSCEVYDP--ATETWTELCPMIEARK----------NHGLVF----V-K---DKIFAVGGQNGLGGLDN 217 (306)
T ss_dssp EESCTTTCEECCCEEEEET--TTTEEEEECCCSSCCB----------SCEEEE----E-T---TEEEEECCEETTEEBCC
T ss_pred CCCCCCcccccceEEEeCC--CCCeEEECCCccchhh----------cceEEE----E-C---CEEEEEeCCCCCCCCce
Confidence 532 1 345777775 3467998864332211 111222 2 3 678776431 24
Q ss_pred EEEEECCCCeEEEeE
Q 036467 335 LILYDFENEIATDFK 349 (369)
Q Consensus 335 ~~~ydl~~~~~~~v~ 349 (369)
+..||+++++|+.+.
T Consensus 218 ~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 218 VEYYDIKLNEWKMVS 232 (306)
T ss_dssp EEEEETTTTEEEECC
T ss_pred EEEeeCCCCcEEECC
Confidence 999999999999984
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.34 E-value=1.8e-10 Score=102.20 Aligned_cols=197 Identities=13% Similarity=0.095 Sum_probs=132.6
Q ss_pred CceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCceE
Q 036467 108 NEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKWK 187 (369)
Q Consensus 108 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W~ 187 (369)
..++.++||.+++|..+++++..+.. ...+.+ + =+++.+.. . +.......+++|+..+++|+
T Consensus 29 ~~~~~~~d~~~~~W~~~~~~p~~r~~-----~~~~~~------~-~~lyv~GG-----~-~~~~~~~~~~~~d~~~~~W~ 90 (302)
T 2xn4_A 29 IRSVECYDFKEERWHQVAELPSRRCR-----AGMVYM------A-GLVFAVGG-----F-NGSLRVRTVDSYDPVKDQWT 90 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBS-----CEEEEE------T-TEEEEESC-----B-CSSSBCCCEEEEETTTTEEE
T ss_pred CCcEEEEcCcCCcEeEcccCCccccc-----ceEEEE------C-CEEEEEeC-----c-CCCccccceEEECCCCCcee
Confidence 35789999999999999887765432 111111 1 13444433 1 11233467899999999999
Q ss_pred EccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCceeEEEEECCcEEEEEe
Q 036467 188 KINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVFRGEFAMFHM 266 (369)
Q Consensus 188 ~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~G~L~~~~~ 266 (369)
.+ ..+|.....+..+.++|.+|.+++.... .....+..||+.+++|+.+ ++|... .....+..+|+|+++..
T Consensus 91 ~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv~GG 163 (302)
T 2xn4_A 91 SV-ANMRDRRSTLGAAVLNGLLYAVGGFDGS-TGLSSVEAYNIKSNEWFHVAPMNTRR-----SSVGVGVVGGLLYAVGG 163 (302)
T ss_dssp EE-CCCSSCCBSCEEEEETTEEEEEEEECSS-CEEEEEEEEETTTTEEEEECCCSSCC-----BSCEEEEETTEEEEECC
T ss_pred eC-CCCCccccceEEEEECCEEEEEcCCCCC-ccCceEEEEeCCCCeEeecCCCCCcc-----cCceEEEECCEEEEEeC
Confidence 99 7788766666668899999999986532 2345789999999999999 555443 34566778999999987
Q ss_pred cCCC----eEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECC------CeEE
Q 036467 267 WRED----RVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGD------GELI 336 (369)
Q Consensus 267 ~~~~----~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~ 336 (369)
.... .-++|.++- ...+|+++..++.... .....+ . + ++|++..+. ..+.
T Consensus 164 ~~~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~----------~~~~~~----~-~---~~iyv~GG~~~~~~~~~~~ 223 (302)
T 2xn4_A 164 YDVASRQCLSTVECYNA--TTNEWTYIAEMSTRRS----------GAGVGV----L-N---NLLYAVGGHDGPLVRKSVE 223 (302)
T ss_dssp EETTTTEECCCEEEEET--TTTEEEEECCCSSCCB----------SCEEEE----E-T---TEEEEECCBSSSSBCCCEE
T ss_pred CCCCCCccccEEEEEeC--CCCcEEECCCCccccc----------cccEEE----E-C---CEEEEECCCCCCcccceEE
Confidence 5321 235777765 3467999854432211 111222 2 3 678887532 2499
Q ss_pred EEECCCCeEEEeE
Q 036467 337 LYDFENEIATDFK 349 (369)
Q Consensus 337 ~ydl~~~~~~~v~ 349 (369)
.||+++++|+.+.
T Consensus 224 ~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 224 VYDPTTNAWRQVA 236 (302)
T ss_dssp EEETTTTEEEEEC
T ss_pred EEeCCCCCEeeCC
Confidence 9999999999985
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.33 E-value=3.9e-10 Score=100.00 Aligned_cols=197 Identities=11% Similarity=0.128 Sum_probs=132.8
Q ss_pred CceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCc--
Q 036467 108 NEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDK-- 185 (369)
Q Consensus 108 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~-- 185 (369)
..+++++||.|++|..+|+++..+.. ...+.+ + + +++.+.. . +.......+++|+..+++
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~-----~~~~~~--~----~-~l~v~GG-----~-~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRY-----VASVSL--H----D-RIYVIGG-----Y-DGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBS-----CEEEEE--T----T-EEEEECC-----B-CSSCBCCCEEEEETTCCTTC
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhcc-----ccEEEE--C----C-EEEEEcC-----C-CCCccCceEEEEECCCCCCC
Confidence 45799999999999999987764322 111111 1 1 4444433 1 122345679999999999
Q ss_pred -eEEccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCceeEEEEECCcEEE
Q 036467 186 -WKKINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVFRGEFAM 263 (369)
Q Consensus 186 -W~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~G~L~~ 263 (369)
|+.+ ..+|.....+..+.++|.+|.+++.... .....+..||+.+.+|+.+ ++|... .....+..+|+|++
T Consensus 92 ~W~~~-~~~p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv 164 (301)
T 2vpj_A 92 VWYSV-APMNVRRGLAGATTLGDMIYVSGGFDGS-RRHTSMERYDPNIDQWSMLGDMQTAR-----EGAGLVVASGVIYC 164 (301)
T ss_dssp CCEEE-CCCSSCCBSCEEEEETTEEEEECCBCSS-CBCCEEEEEETTTTEEEEEEECSSCC-----BSCEEEEETTEEEE
T ss_pred eeEEC-CCCCCCccceeEEEECCEEEEEcccCCC-cccceEEEEcCCCCeEEECCCCCCCc-----ccceEEEECCEEEE
Confidence 9999 7888776666668889999999876532 1235799999999999998 566443 34566778999999
Q ss_pred EEecCC--CeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECC------CeE
Q 036467 264 FHMWRE--DRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGD------GEL 335 (369)
Q Consensus 264 ~~~~~~--~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~ 335 (369)
+..... ..-++|+++- ...+|+++..++.... ... ..+ . + ++|++..+. ..+
T Consensus 165 ~GG~~~~~~~~~~~~~d~--~~~~W~~~~~~p~~r~---------~~~-~~~----~-~---~~i~v~GG~~~~~~~~~v 224 (301)
T 2vpj_A 165 LGGYDGLNILNSVEKYDP--HTGHWTNVTPMATKRS---------GAG-VAL----L-N---DHIYVVGGFDGTAHLSSV 224 (301)
T ss_dssp ECCBCSSCBCCCEEEEET--TTTEEEEECCCSSCCB---------SCE-EEE----E-T---TEEEEECCBCSSSBCCCE
T ss_pred ECCCCCCcccceEEEEeC--CCCcEEeCCCCCcccc---------cce-EEE----E-C---CEEEEEeCCCCCcccceE
Confidence 987642 1335677764 3467998854432211 111 122 2 3 678877532 249
Q ss_pred EEEECCCCeEEEeE
Q 036467 336 ILYDFENEIATDFK 349 (369)
Q Consensus 336 ~~ydl~~~~~~~v~ 349 (369)
..||+++++|+.+.
T Consensus 225 ~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 225 EAYNIRTDSWTTVT 238 (301)
T ss_dssp EEEETTTTEEEEEC
T ss_pred EEEeCCCCcEEECC
Confidence 99999999999985
No 10
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.31 E-value=1.3e-10 Score=103.63 Aligned_cols=202 Identities=11% Similarity=0.061 Sum_probs=131.6
Q ss_pred CCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCce
Q 036467 107 CNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKW 186 (369)
Q Consensus 107 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W 186 (369)
...++.++||.|++|..+|+++..+.. ...+.+ + + +++.+..... ..+.......+++|+..+++|
T Consensus 37 ~~~~~~~~d~~~~~W~~~~~~p~~r~~-----~~~~~~--~----~-~lyv~GG~~~--~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 37 SLSYLEAYNPSNGTWLRLADLQVPRSG-----LAGCVV--G----G-LLYAVGGRNN--SPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSCCBS-----CEEEEE--T----T-EEEEECCEEE--ETTEEEECCCEEEEETTTTEE
T ss_pred CcceEEEEcCCCCeEeECCCCCccccc-----ceEEEE--C----C-EEEEECCCcC--CCCCCeecceEEEECCCCCeE
Confidence 346799999999999999887765432 111111 1 1 3333332000 000112345789999999999
Q ss_pred EEccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCceeEEEEECCcEEEEE
Q 036467 187 KKINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVFRGEFAMFH 265 (369)
Q Consensus 187 ~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~G~L~~~~ 265 (369)
+.+ ..+|.....+..+.++|.+|.+++.... .....+..||+.+++|+.+ ++|... .....+..+|+|+++.
T Consensus 103 ~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv~G 175 (308)
T 1zgk_A 103 SPC-APMSVPRNRIGVGVIDGHIYAVGGSHGC-IHHNSVERYEPERDEWHLVAPMLTRR-----IGVGVAVLNRLLYAVG 175 (308)
T ss_dssp EEC-CCCSSCCBTCEEEEETTEEEEECCEETT-EECCCEEEEETTTTEEEECCCCSSCC-----BSCEEEEETTEEEEEC
T ss_pred eEC-CCCCcCccccEEEEECCEEEEEcCCCCC-cccccEEEECCCCCeEeECCCCCccc-----cceEEEEECCEEEEEe
Confidence 999 7777766566668889999999875432 1224789999999999998 556543 3456677899999998
Q ss_pred ecCCC--eEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECC------CeEEE
Q 036467 266 MWRED--RVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGD------GELIL 337 (369)
Q Consensus 266 ~~~~~--~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~ 337 (369)
..... .-++|.++- ...+|+.+..++.... .....+ . + ++|++..+. ..+..
T Consensus 176 G~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~----------~~~~~~----~-~---~~iyv~GG~~~~~~~~~v~~ 235 (308)
T 1zgk_A 176 GFDGTNRLNSAECYYP--ERNEWRMITAMNTIRS----------GAGVCV----L-H---NCIYAAGGYDGQDQLNSVER 235 (308)
T ss_dssp CBCSSCBCCCEEEEET--TTTEEEECCCCSSCCB----------SCEEEE----E-T---TEEEEECCBCSSSBCCCEEE
T ss_pred CCCCCCcCceEEEEeC--CCCeEeeCCCCCCccc----------cceEEE----E-C---CEEEEEeCCCCCCccceEEE
Confidence 76421 335677764 3467998754432211 111222 2 3 678887532 34999
Q ss_pred EECCCCeEEEeE
Q 036467 338 YDFENEIATDFK 349 (369)
Q Consensus 338 ydl~~~~~~~v~ 349 (369)
||+++++|+.+.
T Consensus 236 yd~~~~~W~~~~ 247 (308)
T 1zgk_A 236 YDVETETWTFVA 247 (308)
T ss_dssp EETTTTEEEECC
T ss_pred EeCCCCcEEECC
Confidence 999999999985
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.29 E-value=1.3e-10 Score=105.67 Aligned_cols=224 Identities=10% Similarity=0.041 Sum_probs=132.6
Q ss_pred EeeecccEEEeeccCCceEEEEcCC--ccceeeCCCCC-CCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccC
Q 036467 93 SGSCNGLLCISDQSCNEDIFLFNPS--TKKYKKLPVPE-FDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDI 169 (369)
Q Consensus 93 ~~s~~GLl~~~~~~~~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 169 (369)
.+..+|.|.+..+....+++++||. +++|..+|+++ ..+.. ...+.+ + + +++.+....... ...
T Consensus 15 ~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~-----~~~~~~--~----~-~lyv~GG~~~~~-~~~ 81 (357)
T 2uvk_A 15 GAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQ-----ATSAFI--D----G-NLYVFGGIGKNS-EGL 81 (357)
T ss_dssp EEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBS-----CEEEEE--T----T-EEEEECCEEECT-TSC
T ss_pred EEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCcc-----ceEEEE--C----C-EEEEEcCCCCCC-Ccc
Confidence 3344777766554345689999998 49999999877 44322 122222 1 1 344443310000 001
Q ss_pred CCCcceEEEEEcCCCceEEccCCCC-eeeccCCcEEECceEEEEeecCCCC-----------------------------
Q 036467 170 DSYECEARVYSLASDKWKKINGGIP-YHISSRAAVCFNECLIWKASRGLGR----------------------------- 219 (369)
Q Consensus 170 ~~~~~~~~vys~~t~~W~~~~~~~p-~~~~~~~~v~~~G~lyw~~~~~~~~----------------------------- 219 (369)
......+++|+..+++|+.+ ..++ .....+..+..+|.||.+++.....
T Consensus 82 ~~~~~~v~~yd~~~~~W~~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (357)
T 2uvk_A 82 TQVFNDVHKYNPKTNSWVKL-MSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKK 160 (357)
T ss_dssp EEECCCEEEEETTTTEEEEC-SCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSC
T ss_pred ceeeccEEEEeCCCCcEEEC-CCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcccc
Confidence 12345789999999999999 6666 4444444577999999999754210
Q ss_pred ----CceeEEEEEECCCcceeee-CCCCCcCCCCCceeEEEEECCcEEEEEecCC---CeEEEEEeccCCCCCCeeEEEE
Q 036467 220 ----GMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVFRGEFAMFHMWRE---DRVEIWTMKDFGARESWTRMFV 291 (369)
Q Consensus 220 ----~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~G~L~~~~~~~~---~~~~iW~l~~~~~~~~W~~~~~ 291 (369)
.....+..||+.+++|+.+ ++|.... ....++..+|+|+++..... ..-++|.++-......|+.+..
T Consensus 161 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~----~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~ 236 (357)
T 2uvk_A 161 AEDYFFNKFLLSFDPSTQQWSYAGESPWYGT----AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAP 236 (357)
T ss_dssp GGGGCCCCEEEEEETTTTEEEEEEECSSCCC----BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCC
T ss_pred ccccCCcccEEEEeCCCCcEEECCCCCCCCc----ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCC
Confidence 0124899999999999998 6665431 23567888999999976421 1335676652113467998765
Q ss_pred EcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECC-----------------------CeEEEEECCCCeEEEe
Q 036467 292 IGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGD-----------------------GELILYDFENEIATDF 348 (369)
Q Consensus 292 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----------------------~~~~~ydl~~~~~~~v 348 (369)
++..... ......+ . + ++|++..+. ..+..||+++++|+.+
T Consensus 237 ~~~~~~~--------~~~~~~~----~-~---~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~ 300 (357)
T 2uvk_A 237 VSSPDGV--------AGGFAGI----S-N---DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKS 300 (357)
T ss_dssp SSTTTCC--------BSCEEEE----E-T---TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEE
T ss_pred CCCCccc--------ccceEEE----E-C---CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeC
Confidence 5322110 0111222 2 3 678876541 1378999999999998
Q ss_pred EE
Q 036467 349 KI 350 (369)
Q Consensus 349 ~~ 350 (369)
.-
T Consensus 301 ~~ 302 (357)
T 2uvk_A 301 GE 302 (357)
T ss_dssp EE
T ss_pred CC
Confidence 53
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.27 E-value=4.7e-10 Score=100.23 Aligned_cols=204 Identities=10% Similarity=0.060 Sum_probs=127.2
Q ss_pred ceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCceEE
Q 036467 109 EDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKWKK 188 (369)
Q Consensus 109 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W~~ 188 (369)
.++.++||.|++|.. ++++.+... ...+... ..+ +++.+.................+++|+..+++|+.
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r------~~~~~~~--~~~--~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 81 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPK------NHVSLVT--KEN--QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG 81 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCS------SEEEEEC--TTC--CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE
T ss_pred CceEEECCCCCeEec-CCCCCCCCc------cceEEEE--ECC--EEEEEcCcccCCCCCccccccceEEecCCCCeEEE
Confidence 689999999999986 333221111 1111111 112 23333321000000011223458999999999999
Q ss_pred ccCCCCeeeccCCcEEECceEEEEeecC--CCCCceeEEEEEECCCcceeee-CCCCCcCCCCCceeEEEEECCcEEEEE
Q 036467 189 INGGIPYHISSRAAVCFNECLIWKASRG--LGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVFRGEFAMFH 265 (369)
Q Consensus 189 ~~~~~p~~~~~~~~v~~~G~lyw~~~~~--~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~G~L~~~~ 265 (369)
+ ..+|.....+..+.++|.+|.+++.. .+......+..||+.+.+|+.+ ++|... .....+..+|+|+++.
T Consensus 82 ~-~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~~~~iyv~G 155 (315)
T 4asc_A 82 M-PPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV-----YGHTVLSHMDLVYVIG 155 (315)
T ss_dssp C-CCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC-----BSCEEEEETTEEEEEC
T ss_pred C-CCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc-----cceeEEEECCEEEEEe
Confidence 9 77887666666688999999999853 1122345789999999999998 566544 3456778999999998
Q ss_pred ecC-C--CeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECC------CeEE
Q 036467 266 MWR-E--DRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGD------GELI 336 (369)
Q Consensus 266 ~~~-~--~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~ 336 (369)
... . ..-++|+++- ...+|+++..++.... .....+ . + ++|++..+. ..+.
T Consensus 156 G~~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~----------~~~~~~----~-~---~~iyv~GG~~~~~~~~~~~ 215 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDP--KKFEWKELAPMQTARS----------LFGATV----H-D---GRIIVAAGVTDTGLTSSAE 215 (315)
T ss_dssp CBCTTSCBCCCEEEEET--TTTEEEECCCCSSCCB----------SCEEEE----E-T---TEEEEEEEECSSSEEEEEE
T ss_pred CCCCCCcccceEEEEeC--CCCeEEECCCCCCchh----------ceEEEE----E-C---CEEEEEeccCCCCccceEE
Confidence 862 2 2335777775 3467998764432211 111222 2 3 678776531 1489
Q ss_pred EEECCCCeEEEeE
Q 036467 337 LYDFENEIATDFK 349 (369)
Q Consensus 337 ~ydl~~~~~~~v~ 349 (369)
.||+++++|+.+.
T Consensus 216 ~yd~~~~~W~~~~ 228 (315)
T 4asc_A 216 VYSITDNKWAPFE 228 (315)
T ss_dssp EEETTTTEEEEEC
T ss_pred EEECCCCeEEECC
Confidence 9999999999985
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.23 E-value=1.1e-09 Score=97.94 Aligned_cols=150 Identities=11% Similarity=0.088 Sum_probs=105.2
Q ss_pred ceEEEEEcCCCceEEccCCCCeeeccCCcEEECceEEEEeecCC-CCCceeEEEEEECCCcceeee-CCCCCcCCCCCce
Q 036467 174 CEARVYSLASDKWKKINGGIPYHISSRAAVCFNECLIWKASRGL-GRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQ 251 (369)
Q Consensus 174 ~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~-~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~ 251 (369)
..+++|+..+++|+.+ ..+|.....+..+.++|.+|.+++... .......+..||+.+.+|+.+ ++|... ..
T Consensus 78 ~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~ 151 (318)
T 2woz_A 78 SYFFQLDNVSSEWVGL-PPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV-----YG 151 (318)
T ss_dssp BEEEEEETTTTEEEEC-SCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE-----ES
T ss_pred ccEEEEeCCCCcEEEC-CCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc-----cc
Confidence 3489999999999999 777776656666888999999998642 223346799999999999998 566554 34
Q ss_pred eEEEEECCcEEEEEecCC---CeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEE
Q 036467 252 IEVGVFRGEFAMFHMWRE---DRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLI 328 (369)
Q Consensus 252 ~~l~~~~G~L~~~~~~~~---~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 328 (369)
...+..+|+|+++..... ..-++|+++- ...+|+++..++.... .....+ . + ++|++
T Consensus 152 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~----------~~~~~~----~-~---~~iyv 211 (318)
T 2woz_A 152 HNVISHNGMIYCLGGKTDDKKCTNRVFIYNP--KKGDWKDLAPMKTPRS----------MFGVAI----H-K---GKIVI 211 (318)
T ss_dssp CEEEEETTEEEEECCEESSSCBCCCEEEEET--TTTEEEEECCCSSCCB----------SCEEEE----E-T---TEEEE
T ss_pred cEEEEECCEEEEEcCCCCCCCccceEEEEcC--CCCEEEECCCCCCCcc----------cceEEE----E-C---CEEEE
Confidence 456778999999987521 1235777775 3467998754432211 111122 2 3 67887
Q ss_pred EECC------CeEEEEECCCCeEEEeE
Q 036467 329 EKGD------GELILYDFENEIATDFK 349 (369)
Q Consensus 329 ~~~~------~~~~~ydl~~~~~~~v~ 349 (369)
..+. ..+..||+++++|+.+.
T Consensus 212 ~GG~~~~~~~~~~~~yd~~~~~W~~~~ 238 (318)
T 2woz_A 212 AGGVTEDGLSASVEAFDLKTNKWEVMT 238 (318)
T ss_dssp EEEEETTEEEEEEEEEETTTCCEEECC
T ss_pred EcCcCCCCccceEEEEECCCCeEEECC
Confidence 7531 24889999999999985
No 14
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.11 E-value=3.8e-09 Score=104.48 Aligned_cols=213 Identities=10% Similarity=-0.016 Sum_probs=130.9
Q ss_pred ecccEEEeec---cCCceEEEEcCCccceeeCC-C-----CCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCc
Q 036467 96 CNGLLCISDQ---SCNEDIFLFNPSTKKYKKLP-V-----PEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPF 166 (369)
Q Consensus 96 ~~GLl~~~~~---~~~~~~~V~NP~T~~~~~LP-~-----~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~ 166 (369)
.+|.|.+..+ ....+++++||.|++|..++ + ++..+.. ...+.+.. + =+++.++. .
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~-----hs~~~~~~----~-~~lyv~GG-----~ 460 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMC-----HTFTTISR----N-NQLLLIGG-----R 460 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBS-----CEEEEETT----T-TEEEEECC-----B
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccc-----eEEEEEcc----C-CEEEEEcC-----C
Confidence 5566555443 13457999999999999998 5 2322211 11111200 1 13555443 1
Q ss_pred ccCCCCcceEEEEEcCCCceEEccCCCCeeeccCCcEEE-CceEEEEeecCCCCCceeEEEEEECCCcceeeeC----CC
Q 036467 167 VDIDSYECEARVYSLASDKWKKINGGIPYHISSRAAVCF-NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIH----RP 241 (369)
Q Consensus 167 ~~~~~~~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~-~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~----~P 241 (369)
.........+++|+..+++|+.+ ..+|.....+..+.+ +|.+|.+++..... .+..||+.+++|+.++ +|
T Consensus 461 ~~~~~~~~dv~~yd~~t~~W~~~-~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g~~p 535 (695)
T 2zwa_A 461 KAPHQGLSDNWIFDMKTREWSMI-KSLSHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEEIFKDVTPKDEFF 535 (695)
T ss_dssp SSTTCBCCCCEEEETTTTEEEEC-CCCSBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTTEEEECCCSSGGG
T ss_pred CCCCCccccEEEEeCCCCcEEEC-CCCCCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCCceEEccCCCCCC
Confidence 11112345699999999999999 888877666666775 99999999876432 6999999999999985 44
Q ss_pred CCcCCCCCceeEEEEEC---CcEEEEEecCC----CeEEEEEeccCCCCCC------eeEEEEEccccccccccccccee
Q 036467 242 EYKDSHDKCQIEVGVFR---GEFAMFHMWRE----DRVEIWTMKDFGARES------WTRMFVIGRRALINFDNYAFVHL 308 (369)
Q Consensus 242 ~~~~~~~~~~~~l~~~~---G~L~~~~~~~~----~~~~iW~l~~~~~~~~------W~~~~~i~~~~~~~~~~~~~~~~ 308 (369)
... .....++++ |+|+++++... ..-++|.++-. ... |+++..++...- ..
T Consensus 536 ~~r-----~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~--~~~w~~~~~W~~~~~~p~~~R---------~~ 599 (695)
T 2zwa_A 536 QNS-----LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD--AENATEPITVIKKLQHPLFQR---------YG 599 (695)
T ss_dssp GSC-----CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC--TTCSSCCEEEEEEEECGGGCC---------BS
T ss_pred Ccc-----cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc--CCccccceEEEEcCCCCCCCc---------cc
Confidence 433 222334444 88999987632 12356666642 244 887776432111 01
Q ss_pred eeeEEeeeccCCCCCCeEEEEEC---------CCeEEEEECCCCeEEEeEEe
Q 036467 309 KPVCEMMNLSNGNGKNFLLIEKG---------DGELILYDFENEIATDFKIQ 351 (369)
Q Consensus 309 ~~~~~~~~~~~~~~~~~i~~~~~---------~~~~~~ydl~~~~~~~v~~~ 351 (369)
....+ .++ ++|++..+ ...+..||+++++|+.+.++
T Consensus 600 ~~~~~----~~~---~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~p 644 (695)
T 2zwa_A 600 SQIKY----ITP---RKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPIS 644 (695)
T ss_dssp CEEEE----EET---TEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCCC
T ss_pred ceEEE----eCC---CEEEEECCccCCCCCCCCCeEEEEECCCCeEEEeecc
Confidence 11222 322 57777653 12499999999999976543
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.09 E-value=9.6e-09 Score=93.32 Aligned_cols=151 Identities=12% Similarity=0.023 Sum_probs=94.9
Q ss_pred ceEEEEEcCCCceEEccCCCCeeecc-CCcEEECceEEEEeecCCCCCceeEEEEEEC--CCcceeee-CCCCCcCCCCC
Q 036467 174 CEARVYSLASDKWKKINGGIPYHISS-RAAVCFNECLIWKASRGLGRGMTVLVVAFDM--NREEFKEI-HRPEYKDSHDK 249 (369)
Q Consensus 174 ~~~~vys~~t~~W~~~~~~~p~~~~~-~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~--~~e~~~~i-~~P~~~~~~~~ 249 (369)
..+++|+..+++|+.+ ..+|..... +..+.++|.||.+++..........+..||+ .+.+|+.+ ++|... ..
T Consensus 168 ~~v~~yd~~~~~W~~~-~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~---~~ 243 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYA-GESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPD---GV 243 (357)
T ss_dssp CEEEEEETTTTEEEEE-EECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTT---CC
T ss_pred ccEEEEeCCCCcEEEC-CCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCc---cc
Confidence 6899999999999999 667755444 4558899999999875322112246777876 89999998 444332 11
Q ss_pred ceeEEEEECCcEEEEEecCC-------------------CeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeee
Q 036467 250 CQIEVGVFRGEFAMFHMWRE-------------------DRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKP 310 (369)
Q Consensus 250 ~~~~l~~~~G~L~~~~~~~~-------------------~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~ 310 (369)
....++..+|+|+++..... ...++|+++- ...+|+++..++.... ....
T Consensus 244 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~---------~~~~ 312 (357)
T 2uvk_A 244 AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLW--HNGKWDKSGELSQGRA---------YGVS 312 (357)
T ss_dssp BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEEC--C---CEEEEECSSCCB---------SSEE
T ss_pred ccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEec--CCCceeeCCCCCCCcc---------ccee
Confidence 34467889999999987421 1245666664 3467999876554322 1111
Q ss_pred eEEeeeccCCCCCCeEEEEECC-------CeEEEEECCCCeEEEe
Q 036467 311 VCEMMNLSNGNGKNFLLIEKGD-------GELILYDFENEIATDF 348 (369)
Q Consensus 311 ~~~~~~~~~~~~~~~i~~~~~~-------~~~~~ydl~~~~~~~v 348 (369)
+.+ + ++|++..+. ..++.+++++++|...
T Consensus 313 ~~~------~---~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 313 LPW------N---NSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp EEE------T---TEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred EEe------C---CEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 222 3 678877531 1388899999998665
No 16
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.00 E-value=7.2e-11 Score=75.38 Aligned_cols=40 Identities=25% Similarity=0.499 Sum_probs=37.0
Q ss_pred CCcHHHHHHHhccCCccccceeeecccchhcccCChhhHH
Q 036467 1 NLPTDIITDIFTRLPVKSLIRFKCVSKSMYALVHNKIFIK 40 (369)
Q Consensus 1 ~LP~Dll~eIL~rLp~~~l~r~r~VcK~W~~li~~~~F~~ 40 (369)
+||+|++.+||++||+++++++++|||+|+.++.++.|-+
T Consensus 11 ~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 11 SLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp SSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred HCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 5999999999999999999999999999999999988743
No 17
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.97 E-value=1e-10 Score=101.41 Aligned_cols=46 Identities=17% Similarity=0.312 Sum_probs=43.9
Q ss_pred CCcHHHHHHHhccCCccccc-eeeecccchhcccCChhhHHHHHhhc
Q 036467 1 NLPTDIITDIFTRLPVKSLI-RFKCVSKSMYALVHNKIFIKKHVNRA 46 (369)
Q Consensus 1 ~LP~Dll~eIL~rLp~~~l~-r~r~VcK~W~~li~~~~F~~~~~~~~ 46 (369)
.||+||+.+||+|||+++|+ ||++|||+|+++++++.|.+++..+.
T Consensus 53 ~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 53 ELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp SSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred hCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 59999999999999999999 99999999999999999999988775
No 18
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.84 E-value=1.4e-06 Score=81.22 Aligned_cols=233 Identities=11% Similarity=0.135 Sum_probs=118.2
Q ss_pred CCcHHHHHHHhccCCccccceeeecccchhcccCChhhHHHHHhhccCCCCCEEEeec-cce--eeeccc-ccc-c--cc
Q 036467 1 NLPTDIITDIFTRLPVKSLIRFKCVSKSMYALVHNKIFIKKHVNRAIHQSDPKLILKN-EFK--LFGVEI-IND-K--KL 73 (369)
Q Consensus 1 ~LP~Dll~eIL~rLp~~~l~r~r~VcK~W~~li~~~~F~~~~~~~~~~~~~~~l~~~~-~~~--~~~~~~-~~~-~--~~ 73 (369)
.||+|++.+||+.|++++|+++++|||+|+.++.++.+-+......... .+...-.. ... .....| ..+ . ..
T Consensus 21 ~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~wk~~~~~~~~~ 99 (445)
T 2ovr_B 21 LLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGID-EPLHIKRRKVIKPGFIHSPWKSAYIRQHRI 99 (445)
T ss_dssp SSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCC-SCCCCCC--CCSSCCCCCHHHHHHHHHHHH
T ss_pred HCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccc-cccccccceecCCCccCCcHHHHHhhhhhh
Confidence 4999999999999999999999999999999999998877665432211 11000000 000 000000 000 0 00
Q ss_pred c-ccc--cc--cccccCCCCc-eEEEeeecccEEEeeccCCceEEEEcCCccceee-CCCCCCCCCCCcccceEEEEEee
Q 036467 74 I-RAR--KL--QVPFALSLEK-VEISGSCNGLLCISDQSCNEDIFLFNPSTKKYKK-LPVPEFDVPTIETTCFTSLGFGY 146 (369)
Q Consensus 74 ~-~~~--~~--~~p~~~~~~~-~~~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~ 146 (369)
. +|. .. ...+...... ...+...+.+|+... .++.+.|||..+++... ++... . .. ..+.+
T Consensus 100 ~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~--~dg~i~vwd~~~~~~~~~~~~h~----~----~v--~~~~~ 167 (445)
T 2ovr_B 100 DTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGS--DDNTLKVWSAVTGKCLRTLVGHT----G----GV--WSSQM 167 (445)
T ss_dssp HHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEE--TTSCEEEEETTTCCEEEECCCCS----S----CE--EEEEE
T ss_pred hhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEE--CCCcEEEEECCCCcEEEEEcCCC----C----CE--EEEEe
Confidence 0 010 00 0011111111 234444555555554 67899999998877553 32211 1 22 23334
Q ss_pred eCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCceEEccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEE
Q 036467 147 HQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKWKKINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVV 226 (369)
Q Consensus 147 d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il 226 (369)
++ + .+.... ....+.+++..++.-...-...... -..+..++.....+..+. .|.
T Consensus 168 ~~---~--~l~s~~-----------~dg~i~vwd~~~~~~~~~~~~h~~~---v~~~~~~~~~l~s~s~dg------~i~ 222 (445)
T 2ovr_B 168 RD---N--IIISGS-----------TDRTLKVWNAETGECIHTLYGHTST---VRCMHLHEKRVVSGSRDA------TLR 222 (445)
T ss_dssp ET---T--EEEEEE-----------TTSCEEEEETTTTEEEEEECCCSSC---EEEEEEETTEEEEEETTS------EEE
T ss_pred cC---C--EEEEEe-----------CCCeEEEEECCcCcEEEEECCCCCc---EEEEEecCCEEEEEeCCC------EEE
Confidence 42 2 222222 2456888888776432210111100 012444555544444442 889
Q ss_pred EEECCCcceeee-CCCCCcCCCCCceeEEEEECCcEEEEEecCCCeEEEEEecc
Q 036467 227 AFDMNREEFKEI-HRPEYKDSHDKCQIEVGVFRGEFAMFHMWREDRVEIWTMKD 279 (369)
Q Consensus 227 ~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~ 279 (369)
.+|+.+.+.... .... ..+.-+..+|...++... ...+.+|-++.
T Consensus 223 ~wd~~~~~~~~~~~~~~-------~~v~~~~~~~~~l~~~~~-dg~i~iwd~~~ 268 (445)
T 2ovr_B 223 VWDIETGQCLHVLMGHV-------AAVRCVQYDGRRVVSGAY-DFMVKVWDPET 268 (445)
T ss_dssp EEESSSCCEEEEEECCS-------SCEEEEEECSSCEEEEET-TSCEEEEEGGG
T ss_pred EEECCCCcEEEEEcCCc-------ccEEEEEECCCEEEEEcC-CCEEEEEECCC
Confidence 999887654322 2111 122223347766555553 45788887764
No 19
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.79 E-value=9.1e-06 Score=75.99 Aligned_cols=41 Identities=27% Similarity=0.386 Sum_probs=36.6
Q ss_pred CCcHHHHHHHhccCCccccceeeecccchhcccCC-hhhHHH
Q 036467 1 NLPTDIITDIFTRLPVKSLIRFKCVSKSMYALVHN-KIFIKK 41 (369)
Q Consensus 1 ~LP~Dll~eIL~rLp~~~l~r~r~VcK~W~~li~~-~~F~~~ 41 (369)
.||+|++.+||+.||+++|++++.|||+|+.++.+ +..-+.
T Consensus 17 ~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~ 58 (464)
T 3v7d_B 17 SLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKK 58 (464)
T ss_dssp HSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHH
T ss_pred HCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 38999999999999999999999999999999998 654433
No 20
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.72 E-value=3.6e-07 Score=89.91 Aligned_cols=109 Identities=8% Similarity=0.038 Sum_probs=74.7
Q ss_pred eEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCceEEc
Q 036467 110 DIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKWKKI 189 (369)
Q Consensus 110 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W~~~ 189 (369)
.+.++||.|++|..++.++..+.. ......+..| =+++.+.. .....+++|++.++.|..+
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~----~~~~~~~~~~-----g~lyv~GG----------~~~~~v~~yd~~t~~W~~~ 280 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDM----FCPGISMDGN-----GQIVVTGG----------NDAKKTSLYDSSSDSWIPG 280 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCC----SSCEEEECTT-----SCEEEECS----------SSTTCEEEEEGGGTEEEEC
T ss_pred EEEEEeCCCCcEEeCcccCCCCCC----ccccccCCCC-----CCEEEeCC----------CCCCceEEecCcCCceeEC
Confidence 689999999999999876554322 1111122111 24444433 1123799999999999999
Q ss_pred cCCCCeeeccCCcEEE-CceEEEEeecCCCCCceeEEEEEECCCcceeee
Q 036467 190 NGGIPYHISSRAAVCF-NECLIWKASRGLGRGMTVLVVAFDMNREEFKEI 238 (369)
Q Consensus 190 ~~~~p~~~~~~~~v~~-~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i 238 (369)
..++.....+..+.+ +|.+|.+++...+......+..||+.+++|+.+
T Consensus 281 -~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 281 -PDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp -CCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred -CCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 778776655555777 999999998432222234789999999999986
No 21
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.67 E-value=8.8e-06 Score=75.60 Aligned_cols=43 Identities=30% Similarity=0.454 Sum_probs=38.5
Q ss_pred CcHH----HHHHHhccCCccccceeeecccchhcccCChhhHHHHHh
Q 036467 2 LPTD----IITDIFTRLPVKSLIRFKCVSKSMYALVHNKIFIKKHVN 44 (369)
Q Consensus 2 LP~D----ll~eIL~rLp~~~l~r~r~VcK~W~~li~~~~F~~~~~~ 44 (369)
||+| |+.+||+.|++++|+++++|||+|+.++.++.+-+....
T Consensus 14 lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~ 60 (435)
T 1p22_A 14 LPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIE 60 (435)
T ss_dssp TGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHH
T ss_pred CCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHH
Confidence 8999 999999999999999999999999999998876665444
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.65 E-value=3.9e-07 Score=90.09 Aligned_cols=158 Identities=13% Similarity=0.045 Sum_probs=105.6
Q ss_pred CcceEEEEEcCCCceEEccC-C-----CCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCC
Q 036467 172 YECEARVYSLASDKWKKING-G-----IPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPE 242 (369)
Q Consensus 172 ~~~~~~vys~~t~~W~~~~~-~-----~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~ 242 (369)
....+++|+..+++|+.+ . . +|.....+..+.+ +|.+|.+++..........+..||+.+.+|+.+ ++|.
T Consensus 410 ~~~~v~~yd~~~~~W~~~-~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~ 488 (695)
T 2zwa_A 410 RVNEILQLSIHYDKIDMK-NIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH 488 (695)
T ss_dssp BCCCEEEEEECSSCEEEE-ECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB
T ss_pred CcCcEEEEECCCCeEEEe-ccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC
Confidence 456789999999999998 4 3 4555555666888 999999998754322234689999999999998 5665
Q ss_pred CcCCCCCceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCC
Q 036467 243 YKDSHDKCQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGN 321 (369)
Q Consensus 243 ~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (369)
.. .....+.+ +|+|+++++..... ++|+++- ...+|+.+......+.. .. ....+.+ ..+
T Consensus 489 ~R-----~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~--~t~~W~~~~~~g~~p~~-----r~-~~~a~v~----~~~- 549 (695)
T 2zwa_A 489 TR-----FRHSACSLPDGNVLILGGVTEGP-AMLLYNV--TEEIFKDVTPKDEFFQN-----SL-VSAGLEF----DPV- 549 (695)
T ss_dssp CC-----BSCEEEECTTSCEEEECCBCSSC-SEEEEET--TTTEEEECCCSSGGGGS-----CC-BSCEEEE----ETT-
T ss_pred Cc-----ccceEEEEcCCEEEEECCCCCCC-CEEEEEC--CCCceEEccCCCCCCCc-----cc-ceeEEEE----eCC-
Confidence 43 34455664 89999999875544 7888875 34679987652211111 00 1111221 211
Q ss_pred CCCeEEEEECC--------CeEEEEECCCCe------EEEeEE
Q 036467 322 GKNFLLIEKGD--------GELILYDFENEI------ATDFKI 350 (369)
Q Consensus 322 ~~~~i~~~~~~--------~~~~~ydl~~~~------~~~v~~ 350 (369)
.++||+..+. ..+..||+++++ |+.+.-
T Consensus 550 -~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 550 -SKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp -TTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred -CCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC
Confidence 2677777532 249999999999 777754
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.36 E-value=2.5e-06 Score=83.91 Aligned_cols=207 Identities=5% Similarity=-0.113 Sum_probs=113.4
Q ss_pred EEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCceEEcc
Q 036467 111 IFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKWKKIN 190 (369)
Q Consensus 111 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W~~~~ 190 (369)
+..++|.+++|..++++|... .. .++ -+. +=|++.+.......+.........+++|+..+++|+.+
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~~-------~~-~av--~~~--~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~- 234 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIVP-------AA-AAI--EPT--SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDR- 234 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSCC-------SE-EEE--ETT--TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCC-
T ss_pred cccCCCCCCeeeeeccCCCCc-------ee-EEE--Eec--CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeC-
Confidence 455688999999887765421 11 111 121 22455554311111111112334789999999999988
Q ss_pred CCCCeeeccC-Cc--EEECceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCceeEEEEE-CCcEEEEE
Q 036467 191 GGIPYHISSR-AA--VCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVF-RGEFAMFH 265 (369)
Q Consensus 191 ~~~p~~~~~~-~~--v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~-~G~L~~~~ 265 (369)
..+|...... .+ +..+|.+|.+++.... .+..||+.+++|+.+ ++|... .....+.+ +|+|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~-----~v~~yd~~t~~W~~~~~~~~~R-----~~~s~~~~~dg~iyv~G 304 (656)
T 1k3i_A 235 TVTVTKHDMFCPGISMDGNGQIVVTGGNDAK-----KTSLYDSSSDSWIPGPDMQVAR-----GYQSSATMSDGRVFTIG 304 (656)
T ss_dssp EEEECSCCCSSCEEEECTTSCEEEECSSSTT-----CEEEEEGGGTEEEECCCCSSCC-----SSCEEEECTTSCEEEEC
T ss_pred cccCCCCCCccccccCCCCCCEEEeCCCCCC-----ceEEecCcCCceeECCCCCccc-----cccceEEecCCeEEEEe
Confidence 5554433222 22 3468999999986532 689999999999988 455433 34566777 89999998
Q ss_pred ec-CC--CeEEEEEeccCCCCCCeeEEEEEccccccccccc--ccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEEC
Q 036467 266 MW-RE--DRVEIWTMKDFGARESWTRMFVIGRRALINFDNY--AFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDF 340 (369)
Q Consensus 266 ~~-~~--~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl 340 (369)
.. .. ..-++++.+- ...+|+.+......++...... .........+ . +.+ +.++.......+..||+
T Consensus 305 G~~~~~~~~~~~e~yd~--~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~-G--g~~---g~~~~~~~~~~v~~yd~ 376 (656)
T 1k3i_A 305 GSWSGGVFEKNGEVYSP--SSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLF-G--WKK---GSVFQAGPSTAMNWYYT 376 (656)
T ss_dssp CCCCSSSCCCCEEEEET--TTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEE-E--CGG---GCEEECCSSSEEEEEEC
T ss_pred CcccCCcccccceEeCC--CCCcceeCCCccccccccccccceeecCCceEEE-E--CCC---CcEEEecCccceeeeec
Confidence 83 21 1123444443 2356988632211111100000 0000111112 0 112 44444333456899999
Q ss_pred CCCeEEEe
Q 036467 341 ENEIATDF 348 (369)
Q Consensus 341 ~~~~~~~v 348 (369)
++++|...
T Consensus 377 ~~~~w~~~ 384 (656)
T 1k3i_A 377 SGSGDVKS 384 (656)
T ss_dssp STTCEEEE
T ss_pred CCcceeec
Confidence 99997643
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.85 E-value=2.6e-06 Score=73.11 Aligned_cols=48 Identities=19% Similarity=0.263 Sum_probs=43.9
Q ss_pred CCcHHHHHHHhccCCccccceeeecccchhcccCChhhHHHHHhhccC
Q 036467 1 NLPTDIITDIFTRLPVKSLIRFKCVSKSMYALVHNKIFIKKHVNRAIH 48 (369)
Q Consensus 1 ~LP~Dll~eIL~rLp~~~l~r~r~VcK~W~~li~~~~F~~~~~~~~~~ 48 (369)
+||+|++..||+.|++++|+++.+|||+||.+.+++..-+.+..+...
T Consensus 7 ~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~~ 54 (312)
T 3l2o_B 7 RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLP 54 (312)
T ss_dssp HSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSGG
T ss_pred hCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccCC
Confidence 489999999999999999999999999999999999988887776543
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.19 E-value=6.2e-05 Score=67.30 Aligned_cols=38 Identities=26% Similarity=0.528 Sum_probs=35.0
Q ss_pred CCcHHHHHHHhccCCccccceeeecccchhcccCChhh
Q 036467 1 NLPTDIITDIFTRLPVKSLIRFKCVSKSMYALVHNKIF 38 (369)
Q Consensus 1 ~LP~Dll~eIL~rLp~~~l~r~r~VcK~W~~li~~~~F 38 (369)
+||+|++.+||.+|+.+++.+++.|||+|+.++.++..
T Consensus 11 ~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 11 SLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp SSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred hCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 59999999999999999999999999999999876653
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.41 E-value=0.00046 Score=66.67 Aligned_cols=32 Identities=22% Similarity=0.450 Sum_probs=29.4
Q ss_pred CCcHHHHHHHhccCC-ccccceeeecccchhcc
Q 036467 1 NLPTDIITDIFTRLP-VKSLIRFKCVSKSMYAL 32 (369)
Q Consensus 1 ~LP~Dll~eIL~rLp-~~~l~r~r~VcK~W~~l 32 (369)
.||+|++.+||.+|| .+++.+++.|||+|+.+
T Consensus 8 ~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 8 SFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp --CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred hCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 489999999999999 99999999999999987
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.00 E-value=0.001 Score=64.18 Aligned_cols=32 Identities=16% Similarity=0.223 Sum_probs=30.4
Q ss_pred CCcHHHHHHHhccC-Cccccceeeecccchhcc
Q 036467 1 NLPTDIITDIFTRL-PVKSLIRFKCVSKSMYAL 32 (369)
Q Consensus 1 ~LP~Dll~eIL~rL-p~~~l~r~r~VcK~W~~l 32 (369)
.||+|++.+||.+| |.+++.+++.|||+|+.+
T Consensus 15 ~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 15 ATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 48999999999999 899999999999999887
No 28
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.74 E-value=0.64 Score=38.98 Aligned_cols=114 Identities=10% Similarity=0.039 Sum_probs=76.4
Q ss_pred EEECceEEEEeecCCCCCceeEEEEEECCCccee-eeCCCCCcCCCCCceeEEEEECCcEEEEEecCCCeEEEEEeccCC
Q 036467 203 VCFNECLIWKASRGLGRGMTVLVVAFDMNREEFK-EIHRPEYKDSHDKCQIEVGVFRGEFAMFHMWREDRVEIWTMKDFG 281 (369)
Q Consensus 203 v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~ 281 (369)
.+.+|.+|.-++.... ..|..+|+.+++-. .+++|... +..-+...+++|+++.-. +. .+|+.+-
T Consensus 27 ~~~~~~LyestG~~g~----S~v~~vD~~tgkv~~~~~l~~~~-----fgeGi~~~~~~ly~ltw~-~~--~v~v~D~-- 92 (243)
T 3mbr_X 27 FYLRGHLYESTGETGR----SSVRKVDLETGRILQRAEVPPPY-----FGAGIVAWRDRLIQLTWR-NH--EGFVYDL-- 92 (243)
T ss_dssp EEETTEEEEEECCTTS----CEEEEEETTTCCEEEEEECCTTC-----CEEEEEEETTEEEEEESS-SS--EEEEEET--
T ss_pred EEECCEEEEECCCCCC----ceEEEEECCCCCEEEEEeCCCCc-----ceeEEEEeCCEEEEEEee-CC--EEEEEEC--
Confidence 5567888887766432 38999999988764 45787654 445567778999998643 33 4677764
Q ss_pred CCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCCeE-EEeEE
Q 036467 282 ARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENEIA-TDFKI 350 (369)
Q Consensus 282 ~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~~~-~~v~~ 350 (369)
++-.++.+++... .+.++ ..+ ++.+++.....++..+|++|.+. +.+..
T Consensus 93 --~tl~~~~ti~~~~------------~Gwgl----t~d--g~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 93 --ATLTPRARFRYPG------------EGWAL----TSD--DSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp --TTTEEEEEEECSS------------CCCEE----EEC--SSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred --CcCcEEEEEeCCC------------CceEE----eeC--CCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 3456777777532 23455 334 36788877666799999999775 55554
No 29
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.09 E-value=1.1 Score=39.88 Aligned_cols=135 Identities=14% Similarity=0.102 Sum_probs=74.4
Q ss_pred ceEEEEEcCCC--ceEEccCCCCeee--------ccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCC
Q 036467 174 CEARVYSLASD--KWKKINGGIPYHI--------SSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPE 242 (369)
Q Consensus 174 ~~~~vys~~t~--~W~~~~~~~p~~~--------~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~ 242 (369)
..+..++..++ .|+.- ...+... ....++..+|.+|.....+ .+.++|..+.+...- +.+.
T Consensus 198 g~l~~~d~~tG~~~w~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g-------~l~~~d~~tG~~~w~~~~~~ 269 (376)
T 3q7m_A 198 GRVSAVLMEQGQMIWQQR-ISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNG-------NLTALDLRSGQIMWKRELGS 269 (376)
T ss_dssp TEEEEEETTTCCEEEEEE-CCC-----------CCCCCCEEETTEEEEECTTS-------CEEEEETTTCCEEEEECCCC
T ss_pred CEEEEEECCCCcEEEEEe-cccCCCCcccccccccCCCcEEECCEEEEEecCc-------EEEEEECCCCcEEeeccCCC
Confidence 45677777665 78755 2222111 1234477889998876544 799999987643222 2221
Q ss_pred CcCCCCCceeEEEEECCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCC
Q 036467 243 YKDSHDKCQIEVGVFRGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNG 322 (369)
Q Consensus 243 ~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (369)
...+...+|.|++.... .. +..++....+..|... .... .....|... +
T Consensus 270 --------~~~~~~~~~~l~~~~~~--g~--l~~~d~~tG~~~w~~~---~~~~--------~~~~~~~~~------~-- 318 (376)
T 3q7m_A 270 --------VNDFIVDGNRIYLVDQN--DR--VMALTIDGGVTLWTQS---DLLH--------RLLTSPVLY------N-- 318 (376)
T ss_dssp --------EEEEEEETTEEEEEETT--CC--EEEEETTTCCEEEEEC---TTTT--------SCCCCCEEE------T--
T ss_pred --------CCCceEECCEEEEEcCC--Ce--EEEEECCCCcEEEeec---ccCC--------CcccCCEEE------C--
Confidence 22455667787776542 23 4444432233446432 0100 011233333 3
Q ss_pred CCeEEEEECCCeEEEEECCCCeEEEe
Q 036467 323 KNFLLIEKGDGELILYDFENEIATDF 348 (369)
Q Consensus 323 ~~~i~~~~~~~~~~~ydl~~~~~~~v 348 (369)
+.|++...++.++.+|.++++...-
T Consensus 319 -~~l~v~~~~g~l~~~d~~tG~~~~~ 343 (376)
T 3q7m_A 319 -GNLVVGDSEGYLHWINVEDGRFVAQ 343 (376)
T ss_dssp -TEEEEECTTSEEEEEETTTCCEEEE
T ss_pred -CEEEEEeCCCeEEEEECCCCcEEEE
Confidence 6788877777799999999986543
No 30
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.23 E-value=1.2 Score=37.64 Aligned_cols=114 Identities=7% Similarity=0.032 Sum_probs=72.5
Q ss_pred EEECceEEEEeecCCCCCceeEEEEEECCCcce-eeeCCCCCcCCCCCceeEEEEECCcEEEEEecCCCeEEEEEeccCC
Q 036467 203 VCFNECLIWKASRGLGRGMTVLVVAFDMNREEF-KEIHRPEYKDSHDKCQIEVGVFRGEFAMFHMWREDRVEIWTMKDFG 281 (369)
Q Consensus 203 v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~ 281 (369)
.+.+|.+|.-++... ...|..+|+++++- ..+++|... +.--+...+++|+++.-. +. .+|+.+-
T Consensus 49 ~~~~~~LyestG~~g----~S~v~~vD~~Tgkv~~~~~l~~~~-----FgeGit~~g~~ly~ltw~-~~--~v~v~D~-- 114 (262)
T 3nol_A 49 FYRNGYFYESTGLNG----RSSIRKVDIESGKTLQQIELGKRY-----FGEGISDWKDKIVGLTWK-NG--LGFVWNI-- 114 (262)
T ss_dssp EEETTEEEEEEEETT----EEEEEEECTTTCCEEEEEECCTTC-----CEEEEEEETTEEEEEESS-SS--EEEEEET--
T ss_pred EEECCEEEEECCCCC----CceEEEEECCCCcEEEEEecCCcc-----ceeEEEEeCCEEEEEEee-CC--EEEEEEC--
Confidence 445888888877642 24899999998876 445777543 344566778899888543 32 4667664
Q ss_pred CCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCCeE-EEeEE
Q 036467 282 ARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENEIA-TDFKI 350 (369)
Q Consensus 282 ~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~~~-~~v~~ 350 (369)
++-.++.+++... ...++ ..+ ++.+++.....++..+|++|.+. ..+..
T Consensus 115 --~t~~~~~ti~~~~------------eG~gl----t~d--g~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 115 --RNLRQVRSFNYDG------------EGWGL----THN--DQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp --TTCCEEEEEECSS------------CCCCE----EEC--SSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred --ccCcEEEEEECCC------------CceEE----ecC--CCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 3355677777532 22333 223 35666665556699999998664 55554
No 31
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.12 E-value=2.1 Score=36.44 Aligned_cols=112 Identities=5% Similarity=-0.037 Sum_probs=69.9
Q ss_pred ceEEEEeecCCCCCceeEEEEEECCCcceee-eCCCCCcCCCCCceeEEEEECCcEEEEEecCCCeEEEEEeccCCCCCC
Q 036467 207 ECLIWKASRGLGRGMTVLVVAFDMNREEFKE-IHRPEYKDSHDKCQIEVGVFRGEFAMFHMWREDRVEIWTMKDFGARES 285 (369)
Q Consensus 207 G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~ 285 (369)
|.+|...+.... ..|..+|+.+.+-.. +++|... +...+...+++|++..-. .. .+++.+- .+
T Consensus 32 g~Lyvstg~~~~----s~v~~iD~~tg~v~~~i~l~~~~-----fgeGi~~~g~~lyv~t~~-~~--~v~viD~----~t 95 (266)
T 2iwa_A 32 DTLFESTGLYGR----SSVRQVALQTGKVENIHKMDDSY-----FGEGLTLLNEKLYQVVWL-KN--IGFIYDR----RT 95 (266)
T ss_dssp TEEEEEECSTTT----CEEEEEETTTCCEEEEEECCTTC-----CEEEEEEETTEEEEEETT-CS--EEEEEET----TT
T ss_pred CeEEEECCCCCC----CEEEEEECCCCCEEEEEecCCCc-----ceEEEEEeCCEEEEEEec-CC--EEEEEEC----CC
Confidence 788887653211 389999999877644 4666543 233455567788888643 22 3666664 34
Q ss_pred eeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCCeE-EEeEEe
Q 036467 286 WTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENEIA-TDFKIQ 351 (369)
Q Consensus 286 W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~~~-~~v~~~ 351 (369)
-..+.+|+.. . ....++ ..+ |+.+|+......+..+|++|.+. +.+...
T Consensus 96 ~~v~~~i~~g-~----------~~g~gl----t~D--g~~l~vs~gs~~l~viD~~t~~v~~~I~Vg 145 (266)
T 2iwa_A 96 LSNIKNFTHQ-M----------KDGWGL----ATD--GKILYGSDGTSILYEIDPHTFKLIKKHNVK 145 (266)
T ss_dssp TEEEEEEECC-S----------SSCCEE----EEC--SSSEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred CcEEEEEECC-C----------CCeEEE----EEC--CCEEEEECCCCeEEEEECCCCcEEEEEEEC
Confidence 5677777754 1 122444 334 46787766566799999999774 555543
No 32
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.61 E-value=3.6 Score=36.33 Aligned_cols=198 Identities=7% Similarity=0.051 Sum_probs=98.7
Q ss_pred eecc--cEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCC
Q 036467 95 SCNG--LLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSY 172 (369)
Q Consensus 95 s~~G--Ll~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 172 (369)
+.+| +|+... .++.+.|||..+++....-..... ......+.+.+..+.+ +.... .
T Consensus 82 ~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~--l~s~~-----------~ 139 (383)
T 3ei3_B 82 HPTHPTTVAVGS--KGGDIILWDYDVQNKTSFIQGMGP-------GDAITGMKFNQFNTNQ--LFVSS-----------I 139 (383)
T ss_dssp CSSCTTEEEEEE--BTSCEEEEETTSTTCEEEECCCST-------TCBEEEEEEETTEEEE--EEEEE-----------T
T ss_pred CCCCCCEEEEEc--CCCeEEEEeCCCcccceeeecCCc-------CCceeEEEeCCCCCCE--EEEEe-----------C
Confidence 4455 444333 567899999988776654322111 1223344555432222 22222 2
Q ss_pred cceEEEEEcCCCceEEccCCCCee-eccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCce
Q 036467 173 ECEARVYSLASDKWKKINGGIPYH-ISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQ 251 (369)
Q Consensus 173 ~~~~~vys~~t~~W~~~~~~~p~~-~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~ 251 (369)
...+.+++..+...+......... ....-...-+|.....+..+. .|..+|+..+....+..... ..
T Consensus 140 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~h~~------~v 207 (383)
T 3ei3_B 140 RGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTG------RLLLLGLDGHEIFKEKLHKA------KV 207 (383)
T ss_dssp TTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTS------EEEEEETTSCEEEEEECSSS------CE
T ss_pred CCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCC------CEEEEECCCCEEEEeccCCC------cE
Confidence 456888888877666551111100 000001223455544444442 88899986655544432211 12
Q ss_pred eEEEEE-CCc-EEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccC-CCCCCeEEE
Q 036467 252 IEVGVF-RGE-FAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSN-GNGKNFLLI 328 (369)
Q Consensus 252 ~~l~~~-~G~-L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ 328 (369)
..+.-. +|+ +.+... ....+.+|-+...... -..+..+.... ....+.+ .. + |..++.
T Consensus 208 ~~~~~~~~~~~~l~s~~-~d~~i~iwd~~~~~~~--~~~~~~~~~~~----------~v~~~~~----s~~~--~~~l~~ 268 (383)
T 3ei3_B 208 THAEFNPRCDWLMATSS-VDATVKLWDLRNIKDK--NSYIAEMPHEK----------PVNAAYF----NPTD--STKLLT 268 (383)
T ss_dssp EEEEECSSCTTEEEEEE-TTSEEEEEEGGGCCST--TCEEEEEECSS----------CEEEEEE----CTTT--SCEEEE
T ss_pred EEEEECCCCCCEEEEEe-CCCEEEEEeCCCCCcc--cceEEEecCCC----------ceEEEEE----cCCC--CCEEEE
Confidence 223323 355 555444 4568999999863221 22333332211 1333444 44 4 345555
Q ss_pred EECCCeEEEEECCCCeE
Q 036467 329 EKGDGELILYDFENEIA 345 (369)
Q Consensus 329 ~~~~~~~~~ydl~~~~~ 345 (369)
...++.+..||+++.+.
T Consensus 269 ~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 269 TDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EESSSEEEEEETTBTTS
T ss_pred EcCCCcEEEEECCCCcc
Confidence 55567799999987654
No 33
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=93.23 E-value=3.9 Score=35.64 Aligned_cols=145 Identities=14% Similarity=0.099 Sum_probs=70.9
Q ss_pred cceEEEEEcCCCceEEccCCCCeeeccCCcEEEC----ceEEEEeecCCCCCceeEEEEEECCCcce-eeeCCCCCcCCC
Q 036467 173 ECEARVYSLASDKWKKINGGIPYHISSRAAVCFN----ECLIWKASRGLGRGMTVLVVAFDMNREEF-KEIHRPEYKDSH 247 (369)
Q Consensus 173 ~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~~----G~lyw~~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~ 247 (369)
...+.+++..++.|..+ .........-..+.++ |.+...+..+. .|..+|+.+..- ..+.+....
T Consensus 78 dg~v~iwd~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~------~i~v~d~~~~~~~~~~~~~~~~--- 147 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQI-AVHAVHSASVNSVQWAPHEYGPLLLVASSDG------KVSVVEFKENGTTSPIIIDAHA--- 147 (379)
T ss_dssp TSCEEEEEEETTEEEEE-EEECCCSSCEEEEEECCGGGCSEEEEEETTS------EEEEEECCTTSCCCEEEEECCT---
T ss_pred CCEEEEEEcCCCceeEe-eeecCCCcceEEEEeCCCCCCCEEEEecCCC------cEEEEecCCCCceeeEEecCCC---
Confidence 35688999999887655 2111110000112222 44444444432 788888887632 212111111
Q ss_pred CCceeEEEEE--------------CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEE
Q 036467 248 DKCQIEVGVF--------------RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCE 313 (369)
Q Consensus 248 ~~~~~~l~~~--------------~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~ 313 (369)
.....+.-. +|.+.+.... ...+.+|-+.. ....|.....+....- ...-+.+
T Consensus 148 -~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~--~~~~~~~~~~~~~h~~---------~v~~~~~ 214 (379)
T 3jrp_A 148 -IGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNS--DAQTYVLESTLEGHSD---------WVRDVAW 214 (379)
T ss_dssp -TCEEEEEECCCC----------CTTCEEEEEET-TSCEEEEEEET--TTTEEEEEEEECCCSS---------CEEEEEE
T ss_pred -CceEEEEEcCccccccccccCCCCCCEEEEEeC-CCeEEEEEecC--CCcceeeEEEEecccC---------cEeEEEE
Confidence 011122222 3666555554 45899999975 2344666665543221 1223333
Q ss_pred eeeccCCCCCCeEEE-EECCCeEEEEECCCCe
Q 036467 314 MMNLSNGNGKNFLLI-EKGDGELILYDFENEI 344 (369)
Q Consensus 314 ~~~~~~~~~~~~i~~-~~~~~~~~~ydl~~~~ 344 (369)
..+..++.+++ ...++.+..||+++++
T Consensus 215 ----sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 215 ----SPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp ----CCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred ----CCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 32200034444 4445668999988763
No 34
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=92.99 E-value=7.6 Score=38.29 Aligned_cols=145 Identities=14% Similarity=0.089 Sum_probs=69.7
Q ss_pred cceEEEEEcCCCceEEccCCCCeeeccCCcEEEC----ceEEEEeecCCCCCceeEEEEEECCCccee-eeCCCCCcCCC
Q 036467 173 ECEARVYSLASDKWKKINGGIPYHISSRAAVCFN----ECLIWKASRGLGRGMTVLVVAFDMNREEFK-EIHRPEYKDSH 247 (369)
Q Consensus 173 ~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~~----G~lyw~~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~ 247 (369)
...+.+++..++.|..+ .........-..+.++ |.....+..+. .|..+|+.+..-. ...+....
T Consensus 76 Dg~I~vwd~~~~~~~~~-~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg------~I~vwdl~~~~~~~~~~~~~~~--- 145 (753)
T 3jro_A 76 DGKVLIWKEENGRWSQI-AVHAVHSASVNSVQWAPHEYGPLLLVASSDG------KVSVVEFKENGTTSPIIIDAHA--- 145 (753)
T ss_dssp TSCEEEEEEETTEEEEE-EEECCCSSCEEEEEECCGGGCSEEEEEETTS------EEEEEECCSSSCCCCEEEECCS---
T ss_pred CCeEEEEECCCCccccc-ccccCCCCCeEEEEECCCCCCCEEEEEeCCC------cEEEEEeecCCCcceeEeecCC---
Confidence 45688999998887655 2111110000112222 55555554442 7888888776221 11111111
Q ss_pred CCceeEEEEE--------------CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEE
Q 036467 248 DKCQIEVGVF--------------RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCE 313 (369)
Q Consensus 248 ~~~~~~l~~~--------------~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~ 313 (369)
.....+.-. +|.+.+++.. ...+.+|-+... ...+.....+....- ....+.+
T Consensus 146 -~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~-dg~I~iwd~~~~--~~~~~~~~~~~~h~~---------~V~~l~~ 212 (753)
T 3jro_A 146 -IGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNSD--AQTYVLESTLEGHSD---------WVRDVAW 212 (753)
T ss_dssp -SCEEEEEECCCC---------CGGGCCEEEEET-TSCEEEEEEETT--TTEEEEEEEECCCSS---------CEEEEEE
T ss_pred -CceEEEEecCcccccccccccCCCCCEEEEEEC-CCeEEEEeccCC--cccceeeeeecCCCC---------cEEEEEe
Confidence 011122211 3555555543 558999999862 344665555543221 1222333
Q ss_pred eeeccCCCCCCeEEE-EECCCeEEEEECCCCe
Q 036467 314 MMNLSNGNGKNFLLI-EKGDGELILYDFENEI 344 (369)
Q Consensus 314 ~~~~~~~~~~~~i~~-~~~~~~~~~ydl~~~~ 344 (369)
..+..++.+++ ...++.+..||+.+++
T Consensus 213 ----sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 213 ----SPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp ----CCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred ----ccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 22200034444 4445668999988763
No 35
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=92.77 E-value=2.2 Score=36.17 Aligned_cols=112 Identities=7% Similarity=-0.080 Sum_probs=70.9
Q ss_pred EEECceEEEEeecCCCCCceeEEEEEECCCccee-eeCCCCCcCCCCCceeEEEEECCcEEEEEecCCCeEEEEEeccCC
Q 036467 203 VCFNECLIWKASRGLGRGMTVLVVAFDMNREEFK-EIHRPEYKDSHDKCQIEVGVFRGEFAMFHMWREDRVEIWTMKDFG 281 (369)
Q Consensus 203 v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~ 281 (369)
.+.++.+|.-++... .|..+|+++++-. .+ +|... +.--+...+++|+++.-. +. .+|+.+-
T Consensus 61 ~~~~~~Ly~stG~~g------~v~~iD~~Tgkv~~~~-l~~~~-----FgeGit~~g~~Ly~ltw~-~~--~v~V~D~-- 123 (268)
T 3nok_A 61 VFHQGHFFESTGHQG------TLRQLSLESAQPVWME-RLGNI-----FAEGLASDGERLYQLTWT-EG--LLFTWSG-- 123 (268)
T ss_dssp EEETTEEEEEETTTT------EEEECCSSCSSCSEEE-ECTTC-----CEEEEEECSSCEEEEESS-SC--EEEEEET--
T ss_pred EEECCEEEEEcCCCC------EEEEEECCCCcEEeEE-CCCCc-----ceeEEEEeCCEEEEEEcc-CC--EEEEEEC--
Confidence 445677887776653 6999999987663 34 66543 333466678899888543 32 4677764
Q ss_pred CCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCCeE-EEeEEe
Q 036467 282 ARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENEIA-TDFKIQ 351 (369)
Q Consensus 282 ~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~~~-~~v~~~ 351 (369)
++-.++.+|+... .+.++ ..+ ++.+++.....++..+|++|.+. +.+...
T Consensus 124 --~Tl~~~~ti~~~~------------eGwGL----t~D--g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~ 174 (268)
T 3nok_A 124 --MPPQRERTTRYSG------------EGWGL----CYW--NGKLVRSDGGTMLTFHEPDGFALVGAVQVK 174 (268)
T ss_dssp --TTTEEEEEEECSS------------CCCCE----EEE--TTEEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred --CcCcEEEEEeCCC------------ceeEE----ecC--CCEEEEECCCCEEEEEcCCCCeEEEEEEeC
Confidence 3456777777532 12344 223 36677766566799999999774 555543
No 36
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=91.98 E-value=4.9 Score=33.72 Aligned_cols=190 Identities=8% Similarity=-0.011 Sum_probs=93.8
Q ss_pred eecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcc
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYEC 174 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (369)
..+|-+.+... ....++++|| +++...+..+.. .....++..|+.. ++..... ...
T Consensus 107 ~~~g~l~v~~~-~~~~i~~~d~-~g~~~~~~~~~~--------~~~~~~i~~~~~g---~l~v~~~-----------~~~ 162 (299)
T 2z2n_A 107 GPNGDIWFTEM-NGNRIGRITD-DGKIREYELPNK--------GSYPSFITLGSDN---ALWFTEN-----------QNN 162 (299)
T ss_dssp CTTSCEEEEET-TTTEEEEECT-TCCEEEEECSST--------TCCEEEEEECTTS---CEEEEET-----------TTT
T ss_pred CCCCCEEEEec-CCceEEEECC-CCCEEEecCCCC--------CCCCceEEEcCCC---CEEEEeC-----------CCC
Confidence 44676665542 3568999999 776665432211 1123355566542 2222111 134
Q ss_pred eEEEEEcCCCceEEccCCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCcee
Q 036467 175 EARVYSLASDKWKKINGGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQI 252 (369)
Q Consensus 175 ~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~ 252 (369)
.+.+|+. ++..... .. +.......++.+ +|.+|+..... ..|..||+ +.++..+.+|... ..-.
T Consensus 163 ~i~~~~~-~g~~~~~-~~-~~~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~~~----~~~~ 228 (299)
T 2z2n_A 163 AIGRITE-SGDITEF-KI-PTPASGPVGITKGNDDALWFVEIIG------NKIGRITT-SGEITEFKIPTPN----ARPH 228 (299)
T ss_dssp EEEEECT-TCCEEEE-EC-SSTTCCEEEEEECTTSSEEEEETTT------TEEEEECT-TCCEEEEECSSTT----CCEE
T ss_pred EEEEEcC-CCcEEEe-eC-CCCCCcceeEEECCCCCEEEEccCC------ceEEEECC-CCcEEEEECCCCC----CCce
Confidence 5667777 6666543 11 110011112333 58876655433 28999999 7777776665322 1122
Q ss_pred EEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC
Q 036467 253 EVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG 331 (369)
Q Consensus 253 ~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 331 (369)
.+... +|.|++.... ...+.+ ++.. . ....+....- ...|.+++. .+ |.|++...
T Consensus 229 ~i~~~~~g~l~v~~~~-~~~i~~--~d~~---g---~~~~~~~~~~---------~~~~~~i~~---~~---g~l~v~~~ 284 (299)
T 2z2n_A 229 AITAGAGIDLWFTEWG-ANKIGR--LTSN---N---IIEEYPIQIK---------SAEPHGICF---DG---ETIWFAME 284 (299)
T ss_dssp EEEECSTTCEEEEETT-TTEEEE--EETT---T---EEEEEECSSS---------SCCEEEEEE---CS---SCEEEEET
T ss_pred eEEECCCCCEEEeccC-CceEEE--ECCC---C---ceEEEeCCCC---------CCccceEEe---cC---CCEEEEec
Confidence 34444 4787776532 234444 4421 1 1122221110 123455422 33 78988876
Q ss_pred CCeEEEEECCCCeEE
Q 036467 332 DGELILYDFENEIAT 346 (369)
Q Consensus 332 ~~~~~~ydl~~~~~~ 346 (369)
.+.+..||+++++++
T Consensus 285 ~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 285 CDKIGKLTLIKDNME 299 (299)
T ss_dssp TTEEEEEEEC-----
T ss_pred CCcEEEEEcCcccCC
Confidence 667999999988654
No 37
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=91.84 E-value=6.7 Score=34.97 Aligned_cols=184 Identities=11% Similarity=0.110 Sum_probs=93.1
Q ss_pred CCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCce
Q 036467 107 CNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKW 186 (369)
Q Consensus 107 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W 186 (369)
..+.+.+||..+++...+-.... ......+.+.+ .+.+- +... ....+.+|+..++.-
T Consensus 111 ~d~~v~lw~~~~~~~~~~~~~~~--------~~~v~~v~~s~-~~~~l--~~~~-----------~dg~i~iwd~~~~~~ 168 (401)
T 4aez_A 111 LERNVYVWNADSGSVSALAETDE--------STYVASVKWSH-DGSFL--SVGL-----------GNGLVDIYDVESQTK 168 (401)
T ss_dssp ETTEEEEEETTTCCEEEEEECCT--------TCCEEEEEECT-TSSEE--EEEE-----------TTSCEEEEETTTCCE
T ss_pred CCCeEEEeeCCCCcEeEeeecCC--------CCCEEEEEECC-CCCEE--EEEC-----------CCCeEEEEECcCCeE
Confidence 46899999999988776543321 11233455555 23332 2222 134688888877643
Q ss_pred EEccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE-CCcEEEEE
Q 036467 187 KKINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF-RGEFAMFH 265 (369)
Q Consensus 187 ~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~G~L~~~~ 265 (369)
...-...... -..+..+|.+...+..+. .|..+|+.+..-....+.... .....+.-. +|.+.+..
T Consensus 169 ~~~~~~~~~~---v~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~s~ 235 (401)
T 4aez_A 169 LRTMAGHQAR---VGCLSWNRHVLSSGSRSG------AIHHHDVRIANHQIGTLQGHS----SEVCGLAWRSDGLQLASG 235 (401)
T ss_dssp EEEECCCSSC---EEEEEEETTEEEEEETTS------EEEEEETTSSSCEEEEEECCS----SCEEEEEECTTSSEEEEE
T ss_pred EEEecCCCCc---eEEEEECCCEEEEEcCCC------CEEEEecccCcceeeEEcCCC----CCeeEEEEcCCCCEEEEE
Confidence 2220111100 112455676655555542 899999984332222211111 111222222 46665555
Q ss_pred ecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC---CCeEEEEECCC
Q 036467 266 MWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG---DGELILYDFEN 342 (369)
Q Consensus 266 ~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~ydl~~ 342 (369)
.. ...+.+|-+.. -..+..+....- ....+.+ ..+ +..++.... ++.+..||+++
T Consensus 236 ~~-d~~v~iwd~~~------~~~~~~~~~~~~---------~v~~~~~----~p~--~~~ll~~~~gs~d~~i~i~d~~~ 293 (401)
T 4aez_A 236 GN-DNVVQIWDARS------SIPKFTKTNHNA---------AVKAVAW----CPW--QSNLLATGGGTMDKQIHFWNAAT 293 (401)
T ss_dssp ET-TSCEEEEETTC------SSEEEEECCCSS---------CCCEEEE----CTT--STTEEEEECCTTTCEEEEEETTT
T ss_pred eC-CCeEEEccCCC------CCccEEecCCcc---------eEEEEEE----CCC--CCCEEEEecCCCCCEEEEEECCC
Confidence 53 45899998874 112233321111 1233444 333 255666543 56699999988
Q ss_pred CeEEE
Q 036467 343 EIATD 347 (369)
Q Consensus 343 ~~~~~ 347 (369)
++...
T Consensus 294 ~~~~~ 298 (401)
T 4aez_A 294 GARVN 298 (401)
T ss_dssp CCEEE
T ss_pred CCEEE
Confidence 77533
No 38
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=91.76 E-value=7.3 Score=35.23 Aligned_cols=149 Identities=13% Similarity=0.145 Sum_probs=72.6
Q ss_pred ecc-cEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcc
Q 036467 96 CNG-LLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYEC 174 (369)
Q Consensus 96 ~~G-Ll~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (369)
.++ +|.... .++.+.|||..+++...+-.... . ......+.+.|..+.+ ++... ...
T Consensus 130 ~~~~~lasGs--~dg~i~lWd~~~~~~~~~~~~~g-H------~~~V~~l~f~p~~~~~-l~s~s------------~D~ 187 (435)
T 4e54_B 130 THPSTVAVGS--KGGDIMLWNFGIKDKPTFIKGIG-A------GGSITGLKFNPLNTNQ-FYASS------------MEG 187 (435)
T ss_dssp SCTTCEEEEE--TTSCEEEECSSCCSCCEEECCCS-S------SCCCCEEEECSSCTTE-EEEEC------------SSS
T ss_pred CCCCEEEEEe--CCCEEEEEECCCCCceeEEEccC-C------CCCEEEEEEeCCCCCE-EEEEe------------CCC
Confidence 344 444444 67899999998876543322111 1 1122245555544443 22221 235
Q ss_pred eEEEEEcCCCceEEccCCCCeeeccCCc--EEECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCcee
Q 036467 175 EARVYSLASDKWKKINGGIPYHISSRAA--VCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQI 252 (369)
Q Consensus 175 ~~~vys~~t~~W~~~~~~~p~~~~~~~~--v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~ 252 (369)
.+.+++..++.-+.....-... ..... ..-+|.+...+..+. .|..+|+.++....+.. +.....
T Consensus 188 ~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~~dg------~i~~wd~~~~~~~~~~~------h~~~v~ 254 (435)
T 4e54_B 188 TTRLQDFKGNILRVFASSDTIN-IWFCSLDVSASSRMVVTGDNVG------NVILLNMDGKELWNLRM------HKKKVT 254 (435)
T ss_dssp CEEEEETTSCEEEEEECCSSCS-CCCCCEEEETTTTEEEEECSSS------BEEEEESSSCBCCCSBC------CSSCEE
T ss_pred EEEEeeccCCceeEEeccCCCC-ccEEEEEECCCCCEEEEEeCCC------cEeeeccCcceeEEEec------ccceEE
Confidence 6788888877665541111111 11111 223565555554432 68888987654332221 111112
Q ss_pred EEEEE-CCcEEEEEecCCCeEEEEEecc
Q 036467 253 EVGVF-RGEFAMFHMWREDRVEIWTMKD 279 (369)
Q Consensus 253 ~l~~~-~G~L~~~~~~~~~~~~iW~l~~ 279 (369)
.+.-. +|.-.++.......+.||-+..
T Consensus 255 ~v~~~p~~~~~~~s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 255 HVALNPCCDWFLATASVDQTVKIWDLRQ 282 (435)
T ss_dssp EEEECTTCSSEEEEEETTSBCCEEETTT
T ss_pred eeeecCCCceEEEEecCcceeeEEeccc
Confidence 22222 3543444443456889998865
No 39
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=91.05 E-value=5.9 Score=34.96 Aligned_cols=115 Identities=14% Similarity=0.164 Sum_probs=65.1
Q ss_pred CcEEECceEEEEeecCCCCCceeEEEEEECCCcc--eeeeCCCCCcCC----CCCceeEEEEECCcEEEEEecCCCeEEE
Q 036467 201 AAVCFNECLIWKASRGLGRGMTVLVVAFDMNREE--FKEIHRPEYKDS----HDKCQIEVGVFRGEFAMFHMWREDRVEI 274 (369)
Q Consensus 201 ~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~--~~~i~~P~~~~~----~~~~~~~l~~~~G~L~~~~~~~~~~~~i 274 (369)
.++..+|.+|.....+ .|.+||.++.+ |+. +++..... ........+..+|++++.... .. |
T Consensus 48 ~p~v~~~~v~~~~~~g-------~v~a~d~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~--g~--l 115 (376)
T 3q7m_A 48 HPALADNVVYAADRAG-------LVKALNADDGKEIWSV-SLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK--AQ--V 115 (376)
T ss_dssp CCEEETTEEEEECTTS-------EEEEEETTTCCEEEEE-ECCC---CCSCCCCCEEEEEEEETTEEEEEETT--SE--E
T ss_pred ccEEECCEEEEEcCCC-------eEEEEEccCCceeeee-cCccccccccccCcccccCceEeCCEEEEEcCC--CE--E
Confidence 4588899999876554 89999998654 433 33321100 111234456667888776532 23 4
Q ss_pred EEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCCeEEEe
Q 036467 275 WTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENEIATDF 348 (369)
Q Consensus 275 W~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~~~~~v 348 (369)
..++....+..|... ++... ...|... + +.|++...++.++.+|.++++..+-
T Consensus 116 ~a~d~~tG~~~W~~~--~~~~~----------~~~p~~~------~---~~v~v~~~~g~l~~~d~~tG~~~W~ 168 (376)
T 3q7m_A 116 YALNTSDGTVAWQTK--VAGEA----------LSRPVVS------D---GLVLIHTSNGQLQALNEADGAVKWT 168 (376)
T ss_dssp EEEETTTCCEEEEEE--CSSCC----------CSCCEEE------T---TEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EEEECCCCCEEEEEe--CCCce----------EcCCEEE------C---CEEEEEcCCCeEEEEECCCCcEEEE
Confidence 555532234457542 11111 1233332 3 6777776667799999998885543
No 40
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=89.86 E-value=16 Score=36.01 Aligned_cols=186 Identities=12% Similarity=0.098 Sum_probs=94.3
Q ss_pred CceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCceE
Q 036467 108 NEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKWK 187 (369)
Q Consensus 108 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W~ 187 (369)
...++.+||.|+++..++..... ......+..|+.. -+++.. ...+..|+..++.|+
T Consensus 426 ~~Gl~~~~~~~~~~~~~~~~~~~-------~~~v~~i~~d~~g----~lwigt------------~~Gl~~~~~~~~~~~ 482 (781)
T 3v9f_A 426 LGNISYYNTRLKKFQIIELEKNE-------LLDVRVFYEDKNK----KIWIGT------------HAGVFVIDLASKKVI 482 (781)
T ss_dssp TEEEEEECSSSCEEEECCSTTTC-------CCCEEEEEECTTS----EEEEEE------------TTEEEEEESSSSSCC
T ss_pred cCCEEEEcCCCCcEEEeccCCCC-------CCeEEEEEECCCC----CEEEEE------------CCceEEEeCCCCeEE
Confidence 35677778877777766533110 1112233333221 133333 246778888888887
Q ss_pred EccCCCC-eeeccC--CcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE-CCcE
Q 036467 188 KINGGIP-YHISSR--AAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF-RGEF 261 (369)
Q Consensus 188 ~~~~~~p-~~~~~~--~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~G~L 261 (369)
.. ...+ ...... ..+.. +|.+ |++..+. .+..||..++++..+..+.... ......+.+. +|.|
T Consensus 483 ~~-~~~~~~~~~~~~i~~i~~d~~g~l-Wigt~~~------Gl~~~~~~~~~~~~~~~~~~l~--~~~i~~i~~d~~g~l 552 (781)
T 3v9f_A 483 HH-YDTSNSQLLENFVRSIAQDSEGRF-WIGTFGG------GVGIYTPDMQLVRKFNQYEGFC--SNTINQIYRSSKGQM 552 (781)
T ss_dssp EE-ECTTTSSCSCSCEEEEEECTTCCE-EEEESSS------CEEEECTTCCEEEEECTTTTCS--CSCEEEEEECTTSCE
T ss_pred ec-ccCcccccccceeEEEEEcCCCCE-EEEEcCC------CEEEEeCCCCeEEEccCCCCCC--CCeeEEEEECCCCCE
Confidence 65 2211 011011 11222 4554 6665432 6888999999998875443331 1123345554 4777
Q ss_pred EEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccc-cccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEEC
Q 036467 262 AMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRA-LINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDF 340 (369)
Q Consensus 262 ~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl 340 (369)
.+... . .+ +..++. .+..+.. +.... +. ......+.. ..+ |.|++....+ +..||+
T Consensus 553 Wi~T~-~--Gl-v~~~d~--~~~~~~~---~~~~~gl~------~~~i~~i~~----d~~---g~lW~~t~~G-l~~~~~ 609 (781)
T 3v9f_A 553 WLATG-E--GL-VCFPSA--RNFDYQV---FQRKEGLP------NTHIRAISE----DKN---GNIWASTNTG-ISCYIT 609 (781)
T ss_dssp EEEET-T--EE-EEESCT--TTCCCEE---ECGGGTCS------CCCCCEEEE----CSS---SCEEEECSSC-EEEEET
T ss_pred EEEEC-C--Cc-eEEECC--CCCcEEE---ccccCCCC------CceEEEEEE----CCC---CCEEEEcCCc-eEEEEC
Confidence 77653 1 22 144443 1222322 22111 11 001222222 334 7898887654 999999
Q ss_pred CCCeEEEeE
Q 036467 341 ENEIATDFK 349 (369)
Q Consensus 341 ~~~~~~~v~ 349 (369)
++++++...
T Consensus 610 ~~~~~~~~~ 618 (781)
T 3v9f_A 610 SKKCFYTYD 618 (781)
T ss_dssp TTTEEEEEC
T ss_pred CCCceEEec
Confidence 999987764
No 41
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=89.76 E-value=9.3 Score=33.10 Aligned_cols=144 Identities=10% Similarity=-0.027 Sum_probs=78.4
Q ss_pred cceEEEEEcCCCce-EEcc-CCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCccee-eeCCCCCcCCCCC
Q 036467 173 ECEARVYSLASDKW-KKIN-GGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFK-EIHRPEYKDSHDK 249 (369)
Q Consensus 173 ~~~~~vys~~t~~W-~~~~-~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~ 249 (369)
...+.+++..+++- +++. ...|..+ .+.-+|.+|+..... ..|..+|+.+.+.. .++.+.... ...
T Consensus 63 ~~~v~viD~~t~~~~~~i~~~~~p~~i----~~~~~g~lyv~~~~~------~~v~~iD~~t~~~~~~i~~g~~~~-~~~ 131 (328)
T 3dsm_A 63 SHVIFAIDINTFKEVGRITGFTSPRYI----HFLSDEKAYVTQIWD------YRIFIINPKTYEITGYIECPDMDM-ESG 131 (328)
T ss_dssp GTEEEEEETTTCCEEEEEECCSSEEEE----EEEETTEEEEEEBSC------SEEEEEETTTTEEEEEEECTTCCT-TTC
T ss_pred CCEEEEEECcccEEEEEcCCCCCCcEE----EEeCCCeEEEEECCC------CeEEEEECCCCeEEEEEEcCCccc-cCC
Confidence 45788899988765 3331 1111111 123588998887433 28999999998765 456554110 000
Q ss_pred ceeEEEEECCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEE
Q 036467 250 CQIEVGVFRGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIE 329 (369)
Q Consensus 250 ~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 329 (369)
.-..++..+|+|++........+.++-++. . ..+.+++.... ..-+.+ ..+ |++++.
T Consensus 132 ~p~~i~~~~~~lyv~~~~~~~~v~viD~~t----~--~~~~~i~~g~~----------p~~i~~----~~d---G~l~v~ 188 (328)
T 3dsm_A 132 STEQMVQYGKYVYVNCWSYQNRILKIDTET----D--KVVDELTIGIQ----------PTSLVM----DKY---NKMWTI 188 (328)
T ss_dssp BCCCEEEETTEEEEEECTTCCEEEEEETTT----T--EEEEEEECSSC----------BCCCEE----CTT---SEEEEE
T ss_pred CcceEEEECCEEEEEcCCCCCEEEEEECCC----C--eEEEEEEcCCC----------ccceEE----cCC---CCEEEE
Confidence 111233367888887642234544443332 1 23334433111 122344 555 778777
Q ss_pred ECC-----------CeEEEEECCCCeEE-EeEE
Q 036467 330 KGD-----------GELILYDFENEIAT-DFKI 350 (369)
Q Consensus 330 ~~~-----------~~~~~ydl~~~~~~-~v~~ 350 (369)
..+ ..+..+|++++++. .+.+
T Consensus 189 ~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 189 TDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF 221 (328)
T ss_dssp BCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC
T ss_pred ECCCccCCccccCCceEEEEECCCCeEEEEEec
Confidence 653 46999999999876 3443
No 42
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=89.73 E-value=8.8 Score=34.51 Aligned_cols=121 Identities=12% Similarity=0.085 Sum_probs=70.4
Q ss_pred ECceEEEEeecCCCCCceeEEEEEECCCcceeee-CCC--------CCcCCCCCceeEEEEE--CCcEEEEEec------
Q 036467 205 FNECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRP--------EYKDSHDKCQIEVGVF--RGEFAMFHMW------ 267 (369)
Q Consensus 205 ~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P--------~~~~~~~~~~~~l~~~--~G~L~~~~~~------ 267 (369)
.+|.++|....+ .+..+|+.++.-..+ +.. .... ....+ .++.. +++||+....
T Consensus 236 ~dG~~~~vs~~g-------~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~-p~g~q-~~a~~~~~~~lyV~~~~~~~~~h 306 (386)
T 3sjl_D 236 KAGRLVWPTYTG-------KIHQIDLSSGDAKFLPAVEALTEAERADGWR-PGGWQ-QVAYHRALDRIYLLVDQRDEWRH 306 (386)
T ss_dssp TTTEEEEEBTTS-------EEEEEECTTSSCEECCCEESSCHHHHHTTEE-ECSSS-CEEEETTTTEEEEEEEECCTTCT
T ss_pred CCCcEEEEeCCC-------EEEEEECCCCcceeecceecccccccccccc-CCCcc-eeeECCCCCeEEEEecccccccc
Confidence 378899987754 799999987754332 110 0000 00011 23333 3688887542
Q ss_pred CCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEE-EC-CCeEEEEECCCCeE
Q 036467 268 REDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIE-KG-DGELILYDFENEIA 345 (369)
Q Consensus 268 ~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~-~~~~~~ydl~~~~~ 345 (369)
+...-+||+++- +++..+.+|+...- ..-+.+ ..+ +...++. .. ++.+.+||.++++.
T Consensus 307 k~~~~~V~viD~----~t~kv~~~i~vg~~----------~~~lav----s~D--~~~~ly~tn~~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 307 KTASRFVVVLDA----KTGERLAKFEMGHE----------IDSINV----SQD--EKPLLYALSTGDKTLYIHDAESGEE 366 (386)
T ss_dssp TSCEEEEEEEET----TTCCEEEEEEEEEE----------ECEEEE----CSS--SSCEEEEEETTTTEEEEEETTTCCE
T ss_pred CCCCCEEEEEEC----CCCeEEEEEECCCC----------cceEEE----CCC--CCeEEEEEcCCCCeEEEEECCCCcE
Confidence 223568999985 55778888776331 223455 555 2324444 33 45699999999885
Q ss_pred -EEeEEecCC
Q 036467 346 -TDFKIQRAP 354 (369)
Q Consensus 346 -~~v~~~~~~ 354 (369)
+.+...+.+
T Consensus 367 ~~~i~~~~~p 376 (386)
T 3sjl_D 367 LRSVNQLGHG 376 (386)
T ss_dssp EEEECCCCSS
T ss_pred EEEecCCCCC
Confidence 556555544
No 43
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=89.56 E-value=10 Score=33.16 Aligned_cols=196 Identities=11% Similarity=0.062 Sum_probs=79.5
Q ss_pred CCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCc-
Q 036467 107 CNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDK- 185 (369)
Q Consensus 107 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~- 185 (369)
.++.+.|||..++.+..+-..... ......+.+.+.. .+ ++. .. ....+.+|+..++.
T Consensus 31 ~d~~i~iw~~~~~~~~~~~~~~~h-------~~~v~~~~~s~~~-~~-l~s-~s-----------~d~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHARTFSDH-------DKIVTCVDWAPKS-NR-IVT-CS-----------QDRNAYVYEKRPDGT 89 (377)
T ss_dssp SSSCBCEEEEETTEEEECCCBCCC-------SSCEEEEEECTTT-CC-EEE-EE-----------TTSSEEEC------C
T ss_pred CCCEEEEEEccCCceEEEEEEecC-------CceEEEEEEeCCC-CE-EEE-Ee-----------CCCeEEEEEcCCCCc
Confidence 466788888888755444333221 1123344455432 22 222 22 23467888887765
Q ss_pred eEEccCCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcc----eeeeCCCCCcCCCCCceeEEEEE-C
Q 036467 186 WKKINGGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREE----FKEIHRPEYKDSHDKCQIEVGVF-R 258 (369)
Q Consensus 186 W~~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~----~~~i~~P~~~~~~~~~~~~l~~~-~ 258 (369)
|... .........-..+.+ +|.....+..+. .|..+|+.+.+ ...+.-|.. .....+.-. +
T Consensus 90 ~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~ 157 (377)
T 3dwl_C 90 WKQT-LVLLRLNRAATFVRWSPNEDKFAVGSGAR------VISVCYFEQENDWWVSKHLKRPLR-----STILSLDWHPN 157 (377)
T ss_dssp CCCE-EECCCCSSCEEEEECCTTSSCCEEEESSS------CEEECCC-----CCCCEEECSSCC-----SCEEEEEECTT
T ss_pred eeee-eEecccCCceEEEEECCCCCEEEEEecCC------eEEEEEECCcccceeeeEeecccC-----CCeEEEEEcCC
Confidence 5433 111000000001111 454444443332 67788887764 223332211 112233333 4
Q ss_pred CcEEEEEecCCCeEEEEEeccCC-----CCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCC
Q 036467 259 GEFAMFHMWREDRVEIWTMKDFG-----ARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDG 333 (369)
Q Consensus 259 G~L~~~~~~~~~~~~iW~l~~~~-----~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 333 (369)
|++.+.... ...+.+|-++..+ ....|........ ....+ .......-+.+ ..+ |..++....++
T Consensus 158 ~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~v~~~~~----sp~--~~~l~~~~~d~ 227 (377)
T 3dwl_C 158 NVLLAAGCA-DRKAYVLSAYVRDVDAKPEASVWGSRLPFNT-VCAEY--PSGGWVHAVGF----SPS--GNALAYAGHDS 227 (377)
T ss_dssp SSEEEEEES-SSCEEEEEECCSSCC-CCCSCSSCSCCCEEE-EEECC--CCSSSEEEEEE----CTT--SSCEEEEETTT
T ss_pred CCEEEEEeC-CCEEEEEEEEecccCCCccccccccccchhh-hhhcc--cCCceEEEEEE----CCC--CCEEEEEeCCC
Confidence 665555543 4589999986321 1112321100000 00000 00011233334 444 24455555667
Q ss_pred eEEEEECCCCeE
Q 036467 334 ELILYDFENEIA 345 (369)
Q Consensus 334 ~~~~ydl~~~~~ 345 (369)
.+..||+++++.
T Consensus 228 ~i~iwd~~~~~~ 239 (377)
T 3dwl_C 228 SVTIAYPSAPEQ 239 (377)
T ss_dssp EEC-CEECSTTS
T ss_pred cEEEEECCCCCC
Confidence 799999988764
No 44
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=89.20 E-value=12 Score=33.55 Aligned_cols=147 Identities=12% Similarity=0.131 Sum_probs=74.8
Q ss_pred eecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcc
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYEC 174 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (369)
|.+++|.... ++.++|||..|++...+-..... ......+.+.+. +.|-++ .. ...
T Consensus 114 S~~n~lAvgl---d~tV~lWd~~tg~~~~~~~~~~~-------~~~V~sv~fspd-g~~las--gs-----------~Dg 169 (420)
T 4gga_A 114 SSGNVLAVAL---DNSVYLWSASSGDILQLLQMEQP-------GEYISSVAWIKE-GNYLAV--GT-----------SSA 169 (420)
T ss_dssp CTTSEEEEEE---TTEEEEEETTTCCEEEEEECCST-------TCCEEEEEECTT-SSEEEE--EE-----------TTS
T ss_pred CCCCEEEEEe---CCEEEEEECCCCCEEEEEEecCC-------CCcEEEEEECCC-CCEEEE--EE-----------CCC
Confidence 5567765443 67999999999987765332211 112234445542 344333 22 245
Q ss_pred eEEEEEcCCCceEEccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEE
Q 036467 175 EARVYSLASDKWKKINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEV 254 (369)
Q Consensus 175 ~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l 254 (369)
.+.+++..++.-......... ....+..+|.+-..+..+. .+..+|..........+.... .....+
T Consensus 170 ~v~iWd~~~~~~~~~~~~h~~---~v~~~s~~~~~l~sgs~d~------~i~~~d~~~~~~~~~~~~~h~----~~~~~~ 236 (420)
T 4gga_A 170 EVQLWDVQQQKRLRNMTSHSA---RVGSLSWNSYILSSGSRSG------HIHHHDVRVAEHHVATLSGHS----QEVCGL 236 (420)
T ss_dssp CEEEEETTTTEEEEEECCCSS---CEEEEEEETTEEEEEETTS------EEEEEETTSSSCEEEEEECCS----SCEEEE
T ss_pred eEEEEEcCCCcEEEEEeCCCC---ceEEEeeCCCEEEEEeCCC------ceeEeeecccceeeEEecccc----cceeee
Confidence 688888887643211011110 0112555666555554442 777888776544332222211 112222
Q ss_pred EEE-CCcEEEEEecCCCeEEEEEecc
Q 036467 255 GVF-RGEFAMFHMWREDRVEIWTMKD 279 (369)
Q Consensus 255 ~~~-~G~L~~~~~~~~~~~~iW~l~~ 279 (369)
... +|+..+... ....+.||-...
T Consensus 237 ~~~~~g~~l~s~~-~D~~v~i~~~~~ 261 (420)
T 4gga_A 237 RWAPDGRHLASGG-NDNLVNVWPSAP 261 (420)
T ss_dssp EECTTSSEEEEEE-TTSCEEEEESSC
T ss_pred eecCCCCeeeeee-ccccceEEeecc
Confidence 222 355555444 345889998875
No 45
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=88.46 E-value=10 Score=31.75 Aligned_cols=204 Identities=13% Similarity=0.145 Sum_probs=100.3
Q ss_pred eecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcc
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYEC 174 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (369)
+.+|-+.+.+. ....+.++|+..+....++........ .....++.++...+ . ++.... ....
T Consensus 38 ~~~g~l~v~~~-~~~~i~~~d~~g~~~~~~~~~~~~~~~----~~~p~~i~~~~~~g-~-l~v~~~----------~~~~ 100 (286)
T 1q7f_A 38 NAQNDIIVADT-NNHRIQIFDKEGRFKFQFGECGKRDSQ----LLYPNRVAVVRNSG-D-IIVTER----------SPTH 100 (286)
T ss_dssp CTTCCEEEEEG-GGTEEEEECTTSCEEEEECCBSSSTTC----BSSEEEEEEETTTT-E-EEEEEC----------GGGC
T ss_pred CCCCCEEEEEC-CCCEEEEECCCCcEEEEecccCCCccc----ccCceEEEEEcCCC-e-EEEEcC----------CCCC
Confidence 44566655542 456789999886665556543211111 12234555543222 2 222211 0134
Q ss_pred eEEEEEcCCCceEEccCCCCeeeccCCcEE--ECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCcee
Q 036467 175 EARVYSLASDKWKKINGGIPYHISSRAAVC--FNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQI 252 (369)
Q Consensus 175 ~~~vys~~t~~W~~~~~~~p~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~ 252 (369)
.+.+|+.....-+.+ ...... ...++. -+|.+|+..... ..|..||...+....+..+... ..-.
T Consensus 101 ~i~~~d~~g~~~~~~-~~~~~~--~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~~~~----~~p~ 167 (286)
T 1q7f_A 101 QIQIYNQYGQFVRKF-GATILQ--HPRGVTVDNKGRIIVVECKV------MRVIIFDQNGNVLHKFGCSKHL----EFPN 167 (286)
T ss_dssp EEEEECTTSCEEEEE-CTTTCS--CEEEEEECTTSCEEEEETTT------TEEEEECTTSCEEEEEECTTTC----SSEE
T ss_pred EEEEECCCCcEEEEe-cCccCC--CceEEEEeCCCCEEEEECCC------CEEEEEcCCCCEEEEeCCCCcc----CCcE
Confidence 677777443333333 111100 011233 368877765443 2899999877666555433222 1122
Q ss_pred EEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC
Q 036467 253 EVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG 331 (369)
Q Consensus 253 ~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 331 (369)
.++.. +|+|++.... ...+.+|-.+ + . .+..+..... ...|.+++. ..+ |.+++...
T Consensus 168 ~i~~~~~g~l~v~~~~-~~~i~~~~~~--g--~---~~~~~~~~g~---------~~~p~~i~~--d~~---G~l~v~~~ 225 (286)
T 1q7f_A 168 GVVVNDKQEIFISDNR-AHCVKVFNYE--G--Q---YLRQIGGEGI---------TNYPIGVGI--NSN---GEILIADN 225 (286)
T ss_dssp EEEECSSSEEEEEEGG-GTEEEEEETT--C--C---EEEEESCTTT---------SCSEEEEEE--CTT---CCEEEEEC
T ss_pred EEEECCCCCEEEEECC-CCEEEEEcCC--C--C---EEEEEccCCc---------cCCCcEEEE--CCC---CCEEEEeC
Confidence 34444 4787776543 3466666432 1 1 2223332111 123333311 445 67888764
Q ss_pred C-C-eEEEEECCCCeEEEeEE
Q 036467 332 D-G-ELILYDFENEIATDFKI 350 (369)
Q Consensus 332 ~-~-~~~~ydl~~~~~~~v~~ 350 (369)
. . .+..||.+++.+..+..
T Consensus 226 ~~~~~i~~~~~~g~~~~~~~~ 246 (286)
T 1q7f_A 226 HNNFNLTIFTQDGQLISALES 246 (286)
T ss_dssp SSSCEEEEECTTSCEEEEEEE
T ss_pred CCCEEEEEECCCCCEEEEEcc
Confidence 3 3 79999988777776654
No 46
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=88.38 E-value=10 Score=31.64 Aligned_cols=146 Identities=12% Similarity=0.017 Sum_probs=83.6
Q ss_pred CcceEEEEEcCCCceEEccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcce-eeeCCCCCcCCCCCc
Q 036467 172 YECEARVYSLASDKWKKINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEF-KEIHRPEYKDSHDKC 250 (369)
Q Consensus 172 ~~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~ 250 (369)
....+.+++..+++=... ..++...+...-...++.+|.+..... .+..||..+.+- ..++.|..
T Consensus 41 g~S~v~~vD~~tgkv~~~-~~l~~~~fgeGi~~~~~~ly~ltw~~~------~v~v~D~~tl~~~~ti~~~~~------- 106 (243)
T 3mbr_X 41 GRSSVRKVDLETGRILQR-AEVPPPYFGAGIVAWRDRLIQLTWRNH------EGFVYDLATLTPRARFRYPGE------- 106 (243)
T ss_dssp TSCEEEEEETTTCCEEEE-EECCTTCCEEEEEEETTEEEEEESSSS------EEEEEETTTTEEEEEEECSSC-------
T ss_pred CCceEEEEECCCCCEEEE-EeCCCCcceeEEEEeCCEEEEEEeeCC------EEEEEECCcCcEEEEEeCCCC-------
Confidence 356889999998755333 223322222222566889999987653 899999987544 45566642
Q ss_pred eeEEEEECCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEE
Q 036467 251 QIEVGVFRGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEK 330 (369)
Q Consensus 251 ~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 330 (369)
...|...+++|++... . =.|++++- ++=..+.+|....-. .......-+-. . + |+|+...
T Consensus 107 Gwglt~dg~~L~vSdg--s--~~l~~iDp----~t~~~~~~I~V~~~g----~~~~~lNeLe~----~-~---G~lyanv 166 (243)
T 3mbr_X 107 GWALTSDDSHLYMSDG--T--AVIRKLDP----DTLQQVGSIKVTAGG----RPLDNLNELEW----V-N---GELLANV 166 (243)
T ss_dssp CCEEEECSSCEEEECS--S--SEEEEECT----TTCCEEEEEECEETT----EECCCEEEEEE----E-T---TEEEEEE
T ss_pred ceEEeeCCCEEEEECC--C--CeEEEEeC----CCCeEEEEEEEccCC----cccccceeeEE----e-C---CEEEEEE
Confidence 2344444567777653 2 24788874 223345555542210 00001111222 2 4 7888766
Q ss_pred C-CCeEEEEECCCCeE-EEeEEe
Q 036467 331 G-DGELILYDFENEIA-TDFKIQ 351 (369)
Q Consensus 331 ~-~~~~~~ydl~~~~~-~~v~~~ 351 (369)
. ...+...|++++++ .++...
T Consensus 167 w~s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 167 WLTSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp TTTTEEEEECTTTCBEEEEEECG
T ss_pred CCCCeEEEEECCCCCEEEEEECC
Confidence 3 45699999999996 555543
No 47
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=87.44 E-value=11 Score=31.09 Aligned_cols=204 Identities=11% Similarity=0.037 Sum_probs=96.9
Q ss_pred EeeecccEEEeeccCCceEEEEcCCc-cceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCC
Q 036467 93 SGSCNGLLCISDQSCNEDIFLFNPST-KKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDS 171 (369)
Q Consensus 93 ~~s~~GLl~~~~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 171 (369)
.-+-+|-.++.. ....++++|..+ ++...+....... ... .+.+.|. +.+ ++.... ...
T Consensus 48 ~~spdg~~l~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~------~~~--~~~~spd-g~~-l~~~~~--------~~~ 107 (297)
T 2ojh_A 48 NWSPDGKYLLLN--SEGLLYRLSLAGDPSPEKVDTGFATI------CNN--DHGISPD-GAL-YAISDK--------VEF 107 (297)
T ss_dssp EECTTSSEEEEE--ETTEEEEEESSSCCSCEECCCTTCCC------BCS--CCEECTT-SSE-EEEEEC--------TTT
T ss_pred EECCCCCEEEEE--cCCeEEEEeCCCCCCceEeccccccc------ccc--ceEECCC-CCE-EEEEEe--------CCC
Confidence 334455543333 356899999999 8877765433110 111 2233332 222 222221 112
Q ss_pred CcceEEEEEcCCCceEEccCCCCeeeccCCcEEECce-EEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCc
Q 036467 172 YECEARVYSLASDKWKKINGGIPYHISSRAAVCFNEC-LIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKC 250 (369)
Q Consensus 172 ~~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 250 (369)
....+.+++..++.-+.+ ....... .....-+|. +++....+. ...|..+|+.+.....+..... .
T Consensus 108 ~~~~l~~~~~~~~~~~~~-~~~~~~~--~~~~spdg~~l~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~------~ 174 (297)
T 2ojh_A 108 GKSAIYLLPSTGGTPRLM-TKNLPSY--WHGWSPDGKSFTYCGIRDQ----VFDIYSMDIDSGVETRLTHGEG------R 174 (297)
T ss_dssp SSCEEEEEETTCCCCEEC-CSSSSEE--EEEECTTSSEEEEEEEETT----EEEEEEEETTTCCEEECCCSSS------C
T ss_pred CcceEEEEECCCCceEEe-ecCCCcc--ceEECCCCCEEEEEECCCC----ceEEEEEECCCCcceEcccCCC------c
Confidence 345666777766665555 2211100 001112454 444443332 2366777777766654422111 1
Q ss_pred eeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEE
Q 036467 251 QIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIE 329 (369)
Q Consensus 251 ~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 329 (369)
...+.-. +|+..++.......+.||.++..+ .. ...+.... .....+.+ ..+ |..|++.
T Consensus 175 ~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~--~~---~~~~~~~~---------~~~~~~~~----s~d--g~~l~~~ 234 (297)
T 2ojh_A 175 NDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG--SS---VERITDSA---------YGDWFPHP----SPS--GDKVVFV 234 (297)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTS--SC---EEECCCCS---------EEEEEEEE----CTT--SSEEEEE
T ss_pred cccceECCCCCEEEEEecCCCCccEEEECCCC--CC---cEEEecCC---------cccCCeEE----CCC--CCEEEEE
Confidence 1222222 476555554434578999997422 11 12221111 11223344 444 3555555
Q ss_pred ECC-----------CeEEEEECCCCeEEEeE
Q 036467 330 KGD-----------GELILYDFENEIATDFK 349 (369)
Q Consensus 330 ~~~-----------~~~~~ydl~~~~~~~v~ 349 (369)
..+ ..++.||+++++.+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 235 SYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp EEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred EcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 432 34999999998876654
No 48
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=87.38 E-value=14 Score=32.32 Aligned_cols=192 Identities=7% Similarity=-0.002 Sum_probs=96.4
Q ss_pred eecc-cEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCc
Q 036467 95 SCNG-LLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYE 173 (369)
Q Consensus 95 s~~G-Ll~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (369)
+.+| .|++... ..+.+.++|+.+++....-.... . ..++.+.+. +.+-++. .. ..
T Consensus 82 spdg~~l~~~~~-~~~~v~v~d~~~~~~~~~~~~~~--------~--~~~~~~s~d-g~~l~~~-~~-----------~~ 137 (391)
T 1l0q_A 82 SPDGKQVYVTNM-ASSTLSVIDTTSNTVAGTVKTGK--------S--PLGLALSPD-GKKLYVT-NN-----------GD 137 (391)
T ss_dssp CTTSSEEEEEET-TTTEEEEEETTTTEEEEEEECSS--------S--EEEEEECTT-SSEEEEE-ET-----------TT
T ss_pred CCCCCEEEEEEC-CCCEEEEEECCCCeEEEEEeCCC--------C--cceEEECCC-CCEEEEE-eC-----------CC
Confidence 3344 3444432 45789999999987765422211 1 234555543 2332222 11 24
Q ss_pred ceEEEEEcCCCceEEccCCCCeeeccCCcEE--ECceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCc
Q 036467 174 CEARVYSLASDKWKKINGGIPYHISSRAAVC--FNECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKC 250 (369)
Q Consensus 174 ~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~ 250 (369)
..+.+++..++..... -...... ..+. -+|...++..... ..|..+|+.+.+.... .... .
T Consensus 138 ~~v~~~d~~~~~~~~~-~~~~~~~---~~~~~~~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~-------~ 201 (391)
T 1l0q_A 138 KTVSVINTVTKAVINT-VSVGRSP---KGIAVTPDGTKVYVANFDS-----MSISVIDTVTNSVIDTVKVEA-------A 201 (391)
T ss_dssp TEEEEEETTTTEEEEE-EECCSSE---EEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECSS-------E
T ss_pred CEEEEEECCCCcEEEE-EecCCCc---ceEEECCCCCEEEEEeCCC-----CEEEEEECCCCeEEEEEecCC-------C
Confidence 5788899888765433 1111000 1122 2464433333322 2789999988765433 2211 1
Q ss_pred eeEEEEE-CCcEEEEEec--CCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEE
Q 036467 251 QIEVGVF-RGEFAMFHMW--REDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLL 327 (369)
Q Consensus 251 ~~~l~~~-~G~L~~~~~~--~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 327 (369)
...+... +|+..++... ....+.+|-++. ...+..++.... ...+.+ ..+ |..++
T Consensus 202 ~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~------~~~~~~~~~~~~----------~~~~~~----s~d--g~~l~ 259 (391)
T 1l0q_A 202 PSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT------NKITARIPVGPD----------PAGIAV----TPD--GKKVY 259 (391)
T ss_dssp EEEEEECTTSSEEEEEEECSSCCEEEEEETTT------TEEEEEEECCSS----------EEEEEE----CTT--SSEEE
T ss_pred ccceEECCCCCEEEEEecCcCCCcEEEEECCC------CeEEEEEecCCC----------ccEEEE----ccC--CCEEE
Confidence 1222332 4655444443 345788887763 233444443211 222344 444 34565
Q ss_pred EEE-CCCeEEEEECCCCeEEEe
Q 036467 328 IEK-GDGELILYDFENEIATDF 348 (369)
Q Consensus 328 ~~~-~~~~~~~ydl~~~~~~~v 348 (369)
+.. .++.+..||+++++....
T Consensus 260 ~s~~~d~~v~v~d~~~~~~~~~ 281 (391)
T 1l0q_A 260 VALSFXNTVSVIDTATNTITAT 281 (391)
T ss_dssp EEETTTTEEEEEETTTTEEEEE
T ss_pred EEcCCCCEEEEEECCCCcEEEE
Confidence 654 356799999999886543
No 49
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=87.27 E-value=14 Score=31.93 Aligned_cols=125 Identities=10% Similarity=0.044 Sum_probs=64.8
Q ss_pred CceEEEEeecCCCCCceeEEEEEECCCcceeeeCC-CCCcCCCCCceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCC
Q 036467 206 NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHR-PEYKDSHDKCQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGAR 283 (369)
Q Consensus 206 ~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~-P~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~ 283 (369)
+|.+|.....+. ...|..||+.+++.+.+.. +.... .-..++.. +|+..++.......+.+|.++..+
T Consensus 50 dg~l~~~~~~~~----~~~v~~~~~~~g~~~~~~~~~~~~~----~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g-- 119 (347)
T 3hfq_A 50 KDCLYSVDKEDD----EGGIAAWQIDGQTAHKLNTVVAPGT----PPAYVAVDEARQLVYSANYHKGTAEVMKIAADG-- 119 (347)
T ss_dssp TCEEEEEEEETT----EEEEEEEEEETTEEEEEEEEEEESC----CCSEEEEETTTTEEEEEETTTTEEEEEEECTTS--
T ss_pred CCeEEEEEecCC----CceEEEEEecCCcEEEeeeeecCCC----CCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCC--
Confidence 788887776421 1389999998877766532 22110 11234444 476555554455689999997522
Q ss_pred CCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC-CCeEEEEECC-CCeEEEe
Q 036467 284 ESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG-DGELILYDFE-NEIATDF 348 (369)
Q Consensus 284 ~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~ydl~-~~~~~~v 348 (369)
....+..+.....-...+........+.+ ..+ |++++... +..+..||++ ++++..+
T Consensus 120 -~~~~~~~~~~~~~~p~~~~~~~~~~~~~~----spd---g~l~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 120 -ALTLTDTVQHSGHGPRPEQDGSHIHYTDL----TPD---NRLAVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp -CEEEEEEEECCCCCSSTTCSSCCEEEEEE----CTT---SCEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred -CeeecceeecCCCCCCccccCCCceEEEE----CCC---CcEEEEeCCCCEEEEEEECCCCcEEEe
Confidence 24444444321110000000111222344 555 45655543 4468899988 6666544
No 50
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=86.66 E-value=13 Score=31.24 Aligned_cols=144 Identities=9% Similarity=-0.042 Sum_probs=80.7
Q ss_pred cceEEEEEcCCCceEEccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcce-eeeCCCCCcCCCCCce
Q 036467 173 ECEARVYSLASDKWKKINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEF-KEIHRPEYKDSHDKCQ 251 (369)
Q Consensus 173 ~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~ 251 (369)
...+.+++..+++=... ..++...+...-...++.+|.+..... .+..||.++.+- ..++.|...
T Consensus 64 ~S~v~~vD~~Tgkv~~~-~~l~~~~FgeGit~~g~~ly~ltw~~~------~v~v~D~~t~~~~~ti~~~~eG------- 129 (262)
T 3nol_A 64 RSSIRKVDIESGKTLQQ-IELGKRYFGEGISDWKDKIVGLTWKNG------LGFVWNIRNLRQVRSFNYDGEG------- 129 (262)
T ss_dssp EEEEEEECTTTCCEEEE-EECCTTCCEEEEEEETTEEEEEESSSS------EEEEEETTTCCEEEEEECSSCC-------
T ss_pred CceEEEEECCCCcEEEE-EecCCccceeEEEEeCCEEEEEEeeCC------EEEEEECccCcEEEEEECCCCc-------
Confidence 46788899988754322 122222211112556789999987653 899999987544 556665432
Q ss_pred eEEEEECCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC
Q 036467 252 IEVGVFRGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG 331 (369)
Q Consensus 252 ~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 331 (369)
..|..-+++|++... +=.||++|- ++=..+.+|....-- .......-+.. . + |+|+....
T Consensus 130 ~glt~dg~~L~~SdG----s~~i~~iDp----~T~~v~~~I~V~~~g----~~~~~lNELe~----~-~---G~lyan~w 189 (262)
T 3nol_A 130 WGLTHNDQYLIMSDG----TPVLRFLDP----ESLTPVRTITVTAHG----EELPELNELEW----V-D---GEIFANVW 189 (262)
T ss_dssp CCEEECSSCEEECCS----SSEEEEECT----TTCSEEEEEECEETT----EECCCEEEEEE----E-T---TEEEEEET
T ss_pred eEEecCCCEEEEECC----CCeEEEEcC----CCCeEEEEEEeccCC----ccccccceeEE----E-C---CEEEEEEc
Confidence 233333456666543 224888875 223345555542210 00001111233 2 4 68887664
Q ss_pred -CCeEEEEECCCCeE-EEeEE
Q 036467 332 -DGELILYDFENEIA-TDFKI 350 (369)
Q Consensus 332 -~~~~~~ydl~~~~~-~~v~~ 350 (369)
...+...|++|+++ +++..
T Consensus 190 ~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 190 QTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp TSSEEEEECTTTCBEEEEEEC
T ss_pred cCCeEEEEECCCCcEEEEEEC
Confidence 45699999999996 45554
No 51
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=86.31 E-value=16 Score=31.92 Aligned_cols=192 Identities=7% Similarity=-0.022 Sum_probs=96.6
Q ss_pred EEeeecc-cEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCC
Q 036467 92 ISGSCNG-LLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDID 170 (369)
Q Consensus 92 ~~~s~~G-Ll~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 170 (369)
+.-+.+| .+++... ..+.+.+||+.+++....-.... ....+.+++. +.+-++. ..
T Consensus 37 ~~~s~dg~~l~~~~~-~d~~i~v~d~~~~~~~~~~~~~~----------~v~~~~~spd-g~~l~~~-~~---------- 93 (391)
T 1l0q_A 37 AVISPDGTKVYVANA-HSNDVSIIDTATNNVIATVPAGS----------SPQGVAVSPD-GKQVYVT-NM---------- 93 (391)
T ss_dssp EEECTTSSEEEEEEG-GGTEEEEEETTTTEEEEEEECSS----------SEEEEEECTT-SSEEEEE-ET----------
T ss_pred EEECCCCCEEEEECC-CCCeEEEEECCCCeEEEEEECCC----------CccceEECCC-CCEEEEE-EC----------
Confidence 3334455 3433332 46789999999887765322211 1224455553 2332222 21
Q ss_pred CCcceEEEEEcCCCceEEccCCCCeeeccCCcEE--ECce-EEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCC
Q 036467 171 SYECEARVYSLASDKWKKINGGIPYHISSRAAVC--FNEC-LIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDS 246 (369)
Q Consensus 171 ~~~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~--~~G~-lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~ 246 (369)
....+.+|+..++.-... ...... ...+. -+|. +|..+..+ ..|..+|+.+.+.... .....
T Consensus 94 -~~~~v~v~d~~~~~~~~~-~~~~~~---~~~~~~s~dg~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~~~--- 159 (391)
T 1l0q_A 94 -ASSTLSVIDTTSNTVAGT-VKTGKS---PLGLALSPDGKKLYVTNNGD------KTVSVINTVTKAVINTVSVGRS--- 159 (391)
T ss_dssp -TTTEEEEEETTTTEEEEE-EECSSS---EEEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECCSS---
T ss_pred -CCCEEEEEECCCCeEEEE-EeCCCC---cceEEECCCCCEEEEEeCCC------CEEEEEECCCCcEEEEEecCCC---
Confidence 235688999888755332 111100 01122 2465 44444333 2899999988765443 22111
Q ss_pred CCCceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCe
Q 036467 247 HDKCQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNF 325 (369)
Q Consensus 247 ~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (369)
...+... +|+..++.......+.+|-+.. ...+..+.... ....+.+ ..+ |..
T Consensus 160 ----~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~------~~~~~~~~~~~----------~~~~~~~----~~~--g~~ 213 (391)
T 1l0q_A 160 ----PKGIAVTPDGTKVYVANFDSMSISVIDTVT------NSVIDTVKVEA----------APSGIAV----NPE--GTK 213 (391)
T ss_dssp ----EEEEEECTTSSEEEEEETTTTEEEEEETTT------TEEEEEEECSS----------EEEEEEE----CTT--SSE
T ss_pred ----cceEEECCCCCEEEEEeCCCCEEEEEECCC------CeEEEEEecCC----------CccceEE----CCC--CCE
Confidence 1222222 4655544444556888887753 23333333211 1222344 444 345
Q ss_pred EEEEE---CCCeEEEEECCCCeEE
Q 036467 326 LLIEK---GDGELILYDFENEIAT 346 (369)
Q Consensus 326 i~~~~---~~~~~~~ydl~~~~~~ 346 (369)
++... .++.+..||+++++..
T Consensus 214 l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 214 AYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp EEEEEECSSCCEEEEEETTTTEEE
T ss_pred EEEEecCcCCCcEEEEECCCCeEE
Confidence 65554 4567999999988753
No 52
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=85.27 E-value=16 Score=30.75 Aligned_cols=191 Identities=6% Similarity=-0.005 Sum_probs=97.4
Q ss_pred CCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCce
Q 036467 107 CNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKW 186 (369)
Q Consensus 107 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W 186 (369)
..+.++.+||.++ ...+..+. ....++.+++.. . ++.... ....+.+|+..++..
T Consensus 48 ~~~~i~~~~~~~~-~~~~~~~~----------~~~~~l~~~~dg-~--l~v~~~-----------~~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 48 RQNRTWAWSDDGQ-LSPEMHPS----------HHQNGHCLNKQG-H--LIACSH-----------GLRRLERQREPGGEW 102 (296)
T ss_dssp GGTEEEEEETTSC-EEEEESSC----------SSEEEEEECTTC-C--EEEEET-----------TTTEEEEECSTTCCE
T ss_pred CCCEEEEEECCCC-eEEEECCC----------CCcceeeECCCC-c--EEEEec-----------CCCeEEEEcCCCCcE
Confidence 4678999999988 55543321 122356666643 2 222221 235678888878877
Q ss_pred EEccCCCC--eeeccCCc--EEECceEEEEeec----C-------CCCCceeEEEEEECCCcceeeeCCCCCcCCCCCce
Q 036467 187 KKINGGIP--YHISSRAA--VCFNECLIWKASR----G-------LGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQ 251 (369)
Q Consensus 187 ~~~~~~~p--~~~~~~~~--v~~~G~lyw~~~~----~-------~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~ 251 (369)
+.+ .... ........ +.-+|.+|+.... . ........|..+|.. .+...+.-... ..
T Consensus 103 ~~~-~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~------~~ 174 (296)
T 3e5z_A 103 ESI-ADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV------KP 174 (296)
T ss_dssp EEE-ECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS------SE
T ss_pred EEE-eeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC------CC
Confidence 655 2111 11111122 3336888775310 0 000001378889887 55554421111 11
Q ss_pred eEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCe-eEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEE
Q 036467 252 IEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESW-TRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIE 329 (369)
Q Consensus 252 ~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 329 (369)
..++.. +|++. +.......+.+|.++.. ... .....+ .... ....-+.+ ..+ |.|++.
T Consensus 175 ~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~---g~~~~~~~~~-~~~~--------~~p~~i~~----d~~---G~l~v~ 234 (296)
T 3e5z_A 175 NGLAFLPSGNLL-VSDTGDNATHRYCLNAR---GETEYQGVHF-TVEP--------GKTDGLRV----DAG---GLIWAS 234 (296)
T ss_dssp EEEEECTTSCEE-EEETTTTEEEEEEECSS---SCEEEEEEEE-CCSS--------SCCCSEEE----BTT---SCEEEE
T ss_pred ccEEECCCCCEE-EEeCCCCeEEEEEECCC---CcCcCCCeEe-eCCC--------CCCCeEEE----CCC---CCEEEE
Confidence 223333 47766 55444557777777631 224 222233 1110 01222444 555 778887
Q ss_pred ECCCeEEEEECCCCeEEEeEEe
Q 036467 330 KGDGELILYDFENEIATDFKIQ 351 (369)
Q Consensus 330 ~~~~~~~~ydl~~~~~~~v~~~ 351 (369)
. +..+..||++++..+.+...
T Consensus 235 ~-~~~v~~~~~~g~~~~~~~~~ 255 (296)
T 3e5z_A 235 A-GDGVHVLTPDGDELGRVLTP 255 (296)
T ss_dssp E-TTEEEEECTTSCEEEEEECS
T ss_pred c-CCeEEEECCCCCEEEEEECC
Confidence 7 56799999997777776543
No 53
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=85.10 E-value=17 Score=30.93 Aligned_cols=113 Identities=11% Similarity=0.110 Sum_probs=59.1
Q ss_pred Cce-EEEEeecCCCCCceeEEEEEECC--Ccceeee-CCCCCcCCCCCceeEEEEE-CCcEEEEEecCCCeEEEEEeccC
Q 036467 206 NEC-LIWKASRGLGRGMTVLVVAFDMN--REEFKEI-HRPEYKDSHDKCQIEVGVF-RGEFAMFHMWREDRVEIWTMKDF 280 (369)
Q Consensus 206 ~G~-lyw~~~~~~~~~~~~~il~fD~~--~e~~~~i-~~P~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~ 280 (369)
+|. +|....... .|..||+. ++++..+ .++... ....+... +|+..++.......+.+|.+++
T Consensus 48 dg~~l~~~~~~~~------~v~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~- 115 (343)
T 1ri6_A 48 DKRYLYVGVRPEF------RVLAYRIAPDDGALTFAAESALPG-----SLTHISTDHQGQFVFVGSYNAGNVSVTRLED- 115 (343)
T ss_dssp TSSEEEEEETTTT------EEEEEEECTTTCCEEEEEEEECSS-----CCSEEEECTTSSEEEEEETTTTEEEEEEEET-
T ss_pred CCCEEEEeecCCC------eEEEEEecCCCCceeeccccccCC-----CCcEEEEcCCCCEEEEEecCCCeEEEEECCC-
Confidence 565 555544321 77787776 6676654 222211 11123333 4665555554456899998862
Q ss_pred CCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEE-CCCeEEEEECCC-CeEEEe
Q 036467 281 GARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEK-GDGELILYDFEN-EIATDF 348 (369)
Q Consensus 281 ~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~ydl~~-~~~~~v 348 (369)
+ ........+.... ....+.+ ..+ |..+++.. .+..+..||+++ +++..+
T Consensus 116 ~--~~~~~~~~~~~~~----------~~~~~~~----s~d--g~~l~~~~~~~~~v~~~d~~~~~~~~~~ 167 (343)
T 1ri6_A 116 G--LPVGVVDVVEGLD----------GCHSANI----SPD--NRTLWVPALKQDRICLFTVSDDGHLVAQ 167 (343)
T ss_dssp T--EEEEEEEEECCCT----------TBCCCEE----CTT--SSEEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred C--ccccccccccCCC----------CceEEEE----CCC--CCEEEEecCCCCEEEEEEecCCCceeee
Confidence 1 2233334433211 1233445 444 34566655 456699999987 666543
No 54
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=84.94 E-value=19 Score=31.29 Aligned_cols=116 Identities=16% Similarity=0.156 Sum_probs=63.8
Q ss_pred Cce-EEEEeecCCCCCceeEEEEEECCCcceeee-C---CCCCcCCCCCceeEEEEE-CCcEEEEEecC-CCeEEEEEec
Q 036467 206 NEC-LIWKASRGLGRGMTVLVVAFDMNREEFKEI-H---RPEYKDSHDKCQIEVGVF-RGEFAMFHMWR-EDRVEIWTMK 278 (369)
Q Consensus 206 ~G~-lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~---~P~~~~~~~~~~~~l~~~-~G~L~~~~~~~-~~~~~iW~l~ 278 (369)
+|. +|...... ..|..||+.+.++..+ . .|... .....+... +|+..++.... ...+.||.++
T Consensus 221 dg~~l~v~~~~~------~~v~v~~~~~g~~~~~~~~~~~~~~~----~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 221 DGKFAYLINEIG------GTVIAFRYADGMLDEIQTVAADTVNA----QGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp TSSEEEEEETTT------CEEEEEEEETTEEEEEEEEESCSSCC----CCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCCEEEEEcCCC------CeEEEEEecCCceEEeEEEecCCCCC----CCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 675 55544333 2788889887766544 2 23221 111233333 57755555544 5689999997
Q ss_pred cCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEE-CCCeEEE--EECCCCeEEEeE
Q 036467 279 DFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEK-GDGELIL--YDFENEIATDFK 349 (369)
Q Consensus 279 ~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~--ydl~~~~~~~v~ 349 (369)
.. ...+..+..++... ...-+.+ ..+ |..|++.. .+..+.. +|+++++++.+.
T Consensus 291 ~~--~g~~~~~~~~~~g~----------~~~~~~~----spd--g~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 291 ET--NGTLTKVGYQLTGI----------HPRNFII----TPN--GKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp TT--TCCEEEEEEEECSS----------CCCEEEE----CTT--SCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred CC--CCcEEEeeEecCCC----------CCceEEE----CCC--CCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 42 23466666655411 1233455 555 34466655 3344444 788899988774
No 55
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=84.85 E-value=18 Score=31.11 Aligned_cols=152 Identities=8% Similarity=0.104 Sum_probs=74.6
Q ss_pred cceEEEEEcC-CCceEEccC-CCCeeecc-CCcEEECce-EEEEeecCCCCCceeEEEEEECC--Ccceeee----CCCC
Q 036467 173 ECEARVYSLA-SDKWKKING-GIPYHISS-RAAVCFNEC-LIWKASRGLGRGMTVLVVAFDMN--REEFKEI----HRPE 242 (369)
Q Consensus 173 ~~~~~vys~~-t~~W~~~~~-~~p~~~~~-~~~v~~~G~-lyw~~~~~~~~~~~~~il~fD~~--~e~~~~i----~~P~ 242 (369)
...+.+|+.. ++....... ..+..... .-.+.-+|. +|....... .|..||+. +.++..+ ..|.
T Consensus 161 ~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~------~v~v~~~~~~~g~~~~~~~~~~~~~ 234 (347)
T 3hfq_A 161 SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSS------QIASLKYDTQTGAFTQLGIVKTIPA 234 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT------EEEEEEEETTTTEEEEEEEEESSCT
T ss_pred CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCC------EEEEEEecCCCCceEEeeeeeecCC
Confidence 3468888887 555543300 00000000 001233676 555444332 45555554 4665443 2333
Q ss_pred CcCCCCCcee-EEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCC
Q 036467 243 YKDSHDKCQI-EVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNG 320 (369)
Q Consensus 243 ~~~~~~~~~~-~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (369)
... ....+ .+... +|+..++.......+.+|.++.. ..+..+..++.... ....+.+ ..+
T Consensus 235 ~~~--~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~---g~~~~~~~~~~~~~---------~~~~~~~----spd 296 (347)
T 3hfq_A 235 DYT--AHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD---GHLTLIQQISTEGD---------FPRDFDL----DPT 296 (347)
T ss_dssp TCC--SCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG---GCEEEEEEEECSSS---------CCCEEEE----CTT
T ss_pred CCC--CCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC---CcEEEeEEEecCCC---------CcCeEEE----CCC
Confidence 221 01122 23333 47644343334568999999752 24666665553211 1233445 555
Q ss_pred CCCCeEEEEECC-CeEEEE--ECCCCeEEEeEE
Q 036467 321 NGKNFLLIEKGD-GELILY--DFENEIATDFKI 350 (369)
Q Consensus 321 ~~~~~i~~~~~~-~~~~~y--dl~~~~~~~v~~ 350 (369)
|..|++...+ ..+..| |.++++++.+.-
T Consensus 297 --g~~l~v~~~~~~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 297 --EAFVVVVNQNTDNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp --SSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred --CCEEEEEEcCCCcEEEEEEeCCCCeEEeccc
Confidence 3456665543 556666 888999988753
No 56
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=84.72 E-value=21 Score=31.75 Aligned_cols=194 Identities=11% Similarity=0.061 Sum_probs=92.3
Q ss_pred cccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceE
Q 036467 97 NGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEA 176 (369)
Q Consensus 97 ~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 176 (369)
+|.+++... ..+.+.+||+.+++.....+....... ......+.+.+. . +++.... ....+
T Consensus 133 ~~~~~~~~~-~~~~i~~~d~~~g~~~~~~~~~~~~~~----~~~v~~~~~~~~--~-~~~~s~~-----------~d~~v 193 (433)
T 3bws_A 133 NTRLAIPLL-EDEGMDVLDINSGQTVRLSPPEKYKKK----LGFVETISIPEH--N-ELWVSQM-----------QANAV 193 (433)
T ss_dssp SSEEEEEBT-TSSSEEEEETTTCCEEEECCCHHHHTT----CCEEEEEEEGGG--T-EEEEEEG-----------GGTEE
T ss_pred CCeEEEEeC-CCCeEEEEECCCCeEeeecCccccccc----CCceeEEEEcCC--C-EEEEEEC-----------CCCEE
Confidence 666655542 456799999999887764332110000 112223444332 2 2333222 24578
Q ss_pred EEEEcCCCceE-EccC--CCCeeeccCCcEEECce-EEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCcee
Q 036467 177 RVYSLASDKWK-KING--GIPYHISSRAAVCFNEC-LIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQI 252 (369)
Q Consensus 177 ~vys~~t~~W~-~~~~--~~p~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~ 252 (369)
.+|+..++.-. .+.. ..+..+ ...-+|. +|..+..+. .|..+|+.+.+.... ++... ...
T Consensus 194 ~~~d~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~------~i~~~d~~~~~~~~~-~~~~~-----~~~ 257 (433)
T 3bws_A 194 HVFDLKTLAYKATVDLTGKWSKIL----LYDPIRDLVYCSNWISE------DISVIDRKTKLEIRK-TDKIG-----LPR 257 (433)
T ss_dssp EEEETTTCCEEEEEECSSSSEEEE----EEETTTTEEEEEETTTT------EEEEEETTTTEEEEE-CCCCS-----EEE
T ss_pred EEEECCCceEEEEEcCCCCCeeEE----EEcCCCCEEEEEecCCC------cEEEEECCCCcEEEE-ecCCC-----Cce
Confidence 88998775432 2211 011111 1222454 444443332 899999987765332 22111 112
Q ss_pred EEEEE-CCcEEEEEec-------CCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCC
Q 036467 253 EVGVF-RGEFAMFHMW-------REDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKN 324 (369)
Q Consensus 253 ~l~~~-~G~L~~~~~~-------~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (369)
.+... +|+..++... ....+.+|-++. . ..+..+.... ...-+.+ ..+ |.
T Consensus 258 ~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~--~----~~~~~~~~~~----------~~~~~~~----~~~--g~ 315 (433)
T 3bws_A 258 GLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK--E----KLIDTIGPPG----------NKRHIVS----GNT--EN 315 (433)
T ss_dssp EEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT--T----EEEEEEEEEE----------CEEEEEE----CSS--TT
T ss_pred EEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC--C----cEEeeccCCC----------CcceEEE----CCC--CC
Confidence 22222 4644444432 134677777763 1 1222222111 1122334 444 34
Q ss_pred eEEEEE-CCCeEEEEECCCCeEEE
Q 036467 325 FLLIEK-GDGELILYDFENEIATD 347 (369)
Q Consensus 325 ~i~~~~-~~~~~~~ydl~~~~~~~ 347 (369)
.+++.. .++.+..||+++++...
T Consensus 316 ~l~~~~~~~~~v~v~d~~~~~~~~ 339 (433)
T 3bws_A 316 KIYVSDMCCSKIEVYDLKEKKVQK 339 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEEecCCCEEEEEECCCCcEEE
Confidence 566663 45679999999887644
No 57
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=84.61 E-value=21 Score=31.71 Aligned_cols=197 Identities=12% Similarity=0.085 Sum_probs=96.6
Q ss_pred eecccEEEeeccCCceEEEEcCCccceee-CCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCc
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKK-LPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYE 173 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (369)
+.+|-+++... ..+.+.+||+.+++... ++... .....+.+++.. .+ ++.... ..
T Consensus 178 ~~~~~~~~s~~-~d~~v~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~~~-~~-l~~~~~-----------~~ 233 (433)
T 3bws_A 178 PEHNELWVSQM-QANAVHVFDLKTLAYKATVDLTG----------KWSKILLYDPIR-DL-VYCSNW-----------IS 233 (433)
T ss_dssp GGGTEEEEEEG-GGTEEEEEETTTCCEEEEEECSS----------SSEEEEEEETTT-TE-EEEEET-----------TT
T ss_pred cCCCEEEEEEC-CCCEEEEEECCCceEEEEEcCCC----------CCeeEEEEcCCC-CE-EEEEec-----------CC
Confidence 44565554442 45789999998866543 33111 122344555532 22 222221 23
Q ss_pred ceEEEEEcCCCceEEccCCCCeeeccCCcEEE--CceEEEEeecCCCCC--ceeEEEEEECCCcceeee-CCCCCcCCCC
Q 036467 174 CEARVYSLASDKWKKINGGIPYHISSRAAVCF--NECLIWKASRGLGRG--MTVLVVAFDMNREEFKEI-HRPEYKDSHD 248 (369)
Q Consensus 174 ~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~--~~~~il~fD~~~e~~~~i-~~P~~~~~~~ 248 (369)
..+.+|+..++..... -..... ...+.+ +|...+.+....+.. ....|..+|+.+.+.... ..+..
T Consensus 234 ~~i~~~d~~~~~~~~~-~~~~~~---~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~----- 304 (433)
T 3bws_A 234 EDISVIDRKTKLEIRK-TDKIGL---PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGN----- 304 (433)
T ss_dssp TEEEEEETTTTEEEEE-CCCCSE---EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEEC-----
T ss_pred CcEEEEECCCCcEEEE-ecCCCC---ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCC-----
Confidence 4788899888765433 111111 011222 565545444211100 013788999987755333 21111
Q ss_pred CceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEE
Q 036467 249 KCQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLL 327 (369)
Q Consensus 249 ~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 327 (369)
...+... +|+..++.......+.+|-++. ...+..++... ....+.+ ..+ |..++
T Consensus 305 --~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~------~~~~~~~~~~~----------~~~~~~~----s~d--g~~l~ 360 (433)
T 3bws_A 305 --KRHIVSGNTENKIYVSDMCCSKIEVYDLKE------KKVQKSIPVFD----------KPNTIAL----SPD--GKYLY 360 (433)
T ss_dssp --EEEEEECSSTTEEEEEETTTTEEEEEETTT------TEEEEEEECSS----------SEEEEEE----CTT--SSEEE
T ss_pred --cceEEECCCCCEEEEEecCCCEEEEEECCC------CcEEEEecCCC----------CCCeEEE----cCC--CCEEE
Confidence 1122222 3644444444456888998763 23334443211 1233444 444 24455
Q ss_pred EEECC---------------CeEEEEECCCCeEEEe
Q 036467 328 IEKGD---------------GELILYDFENEIATDF 348 (369)
Q Consensus 328 ~~~~~---------------~~~~~ydl~~~~~~~v 348 (369)
+...+ +.+..||+++++....
T Consensus 361 ~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 361 VSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp EEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred EEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 55432 3799999999876543
No 58
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=84.16 E-value=18 Score=30.56 Aligned_cols=198 Identities=6% Similarity=-0.022 Sum_probs=93.8
Q ss_pred eeecccEEEeeccCCceEEEEcCCccceee-CCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCC
Q 036467 94 GSCNGLLCISDQSCNEDIFLFNPSTKKYKK-LPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSY 172 (369)
Q Consensus 94 ~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 172 (369)
-+.+|-++... ..+.+.+||..+++... +....... . ......+.+.+. +.+- +. .. .
T Consensus 59 ~~~~~~~l~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~-~----~~~v~~~~~~~~-~~~l-~~-~~-----------~ 117 (337)
T 1gxr_A 59 ISNPTRHVYTG--GKGCVKVWDISHPGNKSPVSQLDCLN-R----DNYIRSCKLLPD-GCTL-IV-GG-----------E 117 (337)
T ss_dssp ECSSSSEEEEE--CBSEEEEEETTSTTCCSCSEEEECSC-T----TSBEEEEEECTT-SSEE-EE-EE-----------S
T ss_pred EecCCcEEEEc--CCCeEEEEECCCCCceeeeecccccC-C----CCcEEEEEEcCC-CCEE-EE-Ec-----------C
Confidence 34455554444 36789999987765322 11110000 0 112334555553 2222 22 22 2
Q ss_pred cceEEEEEcCCCceEEccCCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCC
Q 036467 173 ECEARVYSLASDKWKKINGGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDK 249 (369)
Q Consensus 173 ~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~ 249 (369)
...+.+|+..++..... .........-..+.+ +|.....+..+. .|..+|+.+.+.... .....
T Consensus 118 d~~i~~~d~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~dg------~v~~~d~~~~~~~~~~~~~~~------ 184 (337)
T 1gxr_A 118 ASTLSIWDLAAPTPRIK-AELTSSAPACYALAISPDSKVCFSCCSDG------NIAVWDLHNQTLVRQFQGHTD------ 184 (337)
T ss_dssp SSEEEEEECCCC--EEE-EEEECSSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCCSS------
T ss_pred CCcEEEEECCCCCccee-eecccCCCceEEEEECCCCCEEEEEeCCC------cEEEEeCCCCceeeeeecccC------
Confidence 35788899888764333 110000000001222 455555554432 688899987654332 22111
Q ss_pred ceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEE
Q 036467 250 CQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLI 328 (369)
Q Consensus 250 ~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 328 (369)
....+... +|...++.. ....+.+|-++. ...+..+.... ....+.+ ..+ +..++.
T Consensus 185 ~i~~~~~~~~~~~l~~~~-~dg~i~~~d~~~------~~~~~~~~~~~----------~v~~~~~----s~~--~~~l~~ 241 (337)
T 1gxr_A 185 GASCIDISNDGTKLWTGG-LDNTVRSWDLRE------GRQLQQHDFTS----------QIFSLGY----CPT--GEWLAV 241 (337)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSEEEEEETTT------TEEEEEEECSS----------CEEEEEE----CTT--SSEEEE
T ss_pred ceEEEEECCCCCEEEEEe-cCCcEEEEECCC------CceEeeecCCC----------ceEEEEE----CCC--CCEEEE
Confidence 12223333 466655554 355899998764 12233332211 1223344 444 345555
Q ss_pred EECCCeEEEEECCCCeEEEe
Q 036467 329 EKGDGELILYDFENEIATDF 348 (369)
Q Consensus 329 ~~~~~~~~~ydl~~~~~~~v 348 (369)
...++.+..||+++++...+
T Consensus 242 ~~~~~~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 242 GMESSNVEVLHVNKPDKYQL 261 (337)
T ss_dssp EETTSCEEEEETTSSCEEEE
T ss_pred EcCCCcEEEEECCCCCeEEE
Confidence 55566799999998876544
No 59
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=84.05 E-value=19 Score=30.61 Aligned_cols=142 Identities=11% Similarity=0.070 Sum_probs=61.6
Q ss_pred cceEEEEEcCCCceEEccCCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCC
Q 036467 173 ECEARVYSLASDKWKKINGGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDK 249 (369)
Q Consensus 173 ~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~ 249 (369)
...+.+++..++.-...-......+ ..+.+ +|.+...+..+. .|..+|+.+.+-... .....
T Consensus 194 d~~i~i~d~~~~~~~~~~~~h~~~v---~~~~~s~~~~~l~s~s~Dg------~i~iwd~~~~~~~~~~~~~~~------ 258 (340)
T 4aow_A 194 DKLVKVWNLANCKLKTNHIGHTGYL---NTVTVSPDGSLCASGGKDG------QAMLWDLNEGKHLYTLDGGDI------ 258 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCE---EEEEECTTSSEEEEEETTC------EEEEEETTTTEEEEEEECSSC------
T ss_pred CCEEEEEECCCCceeeEecCCCCcE---EEEEECCCCCEEEEEeCCC------eEEEEEeccCceeeeecCCce------
Confidence 3457778877764433201111000 11222 455544444432 788899887644222 21111
Q ss_pred ceeEEEEECCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEE
Q 036467 250 CQIEVGVFRGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIE 329 (369)
Q Consensus 250 ~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 329 (369)
...+.-..+...++... ...+.||-++. -..+..+.................-+.+ ..+ +..++.
T Consensus 259 -v~~~~~~~~~~~~~~~~-d~~i~iwd~~~------~~~~~~~~~~~~~~~~~~h~~~v~~l~~----s~d---g~~l~s 323 (340)
T 4aow_A 259 -INALCFSPNRYWLCAAT-GPSIKIWDLEG------KIIVDELKQEVISTSSKAEPPQCTSLAW----SAD---GQTLFA 323 (340)
T ss_dssp -EEEEEECSSSSEEEEEE-TTEEEEEETTT------TEEEEEECCC-------CCCCCEEEEEE----CTT---SSEEEE
T ss_pred -EEeeecCCCCceeeccC-CCEEEEEECCC------CeEEEeccccceeeeccCCCCCEEEEEE----CCC---CCEEEE
Confidence 11222233333333333 45888997763 1122222221111000011111233344 445 455454
Q ss_pred -ECCCeEEEEECCCCe
Q 036467 330 -KGDGELILYDFENEI 344 (369)
Q Consensus 330 -~~~~~~~~ydl~~~~ 344 (369)
..++.+.+||++|++
T Consensus 324 gs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 324 GYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EETTSCEEEEEEEC--
T ss_pred EeCCCEEEEEeCCCcC
Confidence 456679999999875
No 60
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=83.94 E-value=19 Score=30.50 Aligned_cols=202 Identities=7% Similarity=-0.043 Sum_probs=96.2
Q ss_pred cccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceE
Q 036467 97 NGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEA 176 (369)
Q Consensus 97 ~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 176 (369)
+|-|...+. ...+++.++|.+++...+.... . ..++..++..+ -+++ . ...+
T Consensus 24 ~~~l~~~d~-~~~~i~~~d~~~~~~~~~~~~~---------~--~~~i~~~~dG~--l~v~--~------------~~~l 75 (297)
T 3g4e_A 24 SNSLLFVDI-PAKKVCRWDSFTKQVQRVTMDA---------P--VSSVALRQSGG--YVAT--I------------GTKF 75 (297)
T ss_dssp TTEEEEEET-TTTEEEEEETTTCCEEEEECSS---------C--EEEEEEBTTSS--EEEE--E------------TTEE
T ss_pred CCEEEEEEC-CCCEEEEEECCCCcEEEEeCCC---------c--eEEEEECCCCC--EEEE--E------------CCeE
Confidence 454544442 5678999999998765543221 1 12455565433 2222 2 2467
Q ss_pred EEEEcCCCceEEccCCCCee--eccCCcE--EECceEEEEeecCCCC-----CceeEEEEEECCCcceeeeCCCCCcCCC
Q 036467 177 RVYSLASDKWKKINGGIPYH--ISSRAAV--CFNECLIWKASRGLGR-----GMTVLVVAFDMNREEFKEIHRPEYKDSH 247 (369)
Q Consensus 177 ~vys~~t~~W~~~~~~~p~~--~~~~~~v--~~~G~lyw~~~~~~~~-----~~~~~il~fD~~~e~~~~i~~P~~~~~~ 247 (369)
.+|+..++.++.+ ...+.. ......+ .-+|.+|+-....... .....|..+|.... ...+. ...
T Consensus 76 ~~~d~~~g~~~~~-~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~--~~~--- 148 (297)
T 3g4e_A 76 CALNWKEQSAVVL-ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYF--DQV--- 148 (297)
T ss_dssp EEEETTTTEEEEE-EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEE--EEE---
T ss_pred EEEECCCCcEEEE-EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEe--ecc---
Confidence 8899988888766 222111 0001112 3368876655332100 11247888887643 32221 111
Q ss_pred CCceeEEEEE-CCc-EEEEEecCCCeEEEEEeccCCCCCCeeEEEEE-cccccccccccccceeeeeEEeeeccCCCCCC
Q 036467 248 DKCQIEVGVF-RGE-FAMFHMWREDRVEIWTMKDFGARESWTRMFVI-GRRALINFDNYAFVHLKPVCEMMNLSNGNGKN 324 (369)
Q Consensus 248 ~~~~~~l~~~-~G~-L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (369)
.....++.. +|+ |+++... ...+.+|.++.. . ........+ ..... ...|-+++. ..+ |
T Consensus 149 -~~pngi~~spdg~~lyv~~~~-~~~i~~~~~d~~-~-G~~~~~~~~~~~~~~---------~~~p~g~~~--d~~---G 210 (297)
T 3g4e_A 149 -DISNGLDWSLDHKIFYYIDSL-SYSVDAFDYDLQ-T-GQISNRRSVYKLEKE---------EQIPDGMCI--DAE---G 210 (297)
T ss_dssp -SBEEEEEECTTSCEEEEEEGG-GTEEEEEEECTT-T-CCEEEEEEEEECCGG---------GCEEEEEEE--BTT---S
T ss_pred -ccccceEEcCCCCEEEEecCC-CCcEEEEeccCC-C-CcccCcEEEEECCCC---------CCCCCeeEE--CCC---C
Confidence 011123333 454 5555543 345555555411 1 222221111 11111 123444311 445 6
Q ss_pred eEEEEEC-CCeEEEEECCCCeE-EEeEEe
Q 036467 325 FLLIEKG-DGELILYDFENEIA-TDFKIQ 351 (369)
Q Consensus 325 ~i~~~~~-~~~~~~ydl~~~~~-~~v~~~ 351 (369)
.|++... +..+..||+++++. ..+..+
T Consensus 211 ~lwva~~~~~~v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 211 KLWVACYNGGRVIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp CEEEEEETTTEEEEECTTTCCEEEEEECS
T ss_pred CEEEEEcCCCEEEEEcCCCceEEEEEECC
Confidence 7888753 45699999996664 555443
No 61
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=83.80 E-value=32 Score=33.10 Aligned_cols=228 Identities=9% Similarity=0.033 Sum_probs=114.9
Q ss_pred CCEEEeeccceeeeccccccccccccccccccccCCCCceE-EEeeecccEEEeeccCCceEEEEcCCccceeeCCCCCC
Q 036467 51 DPKLILKNEFKLFGVEIINDKKLIRARKLQVPFALSLEKVE-ISGSCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEF 129 (369)
Q Consensus 51 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~ 129 (369)
.++|++.....+..++ +++... ....|+........ -....+|.|...+. ....++.+++-.+....+-....
T Consensus 6 ~~~Ll~s~~~~I~~i~---l~~~~~--~~~~~~~~~~~~~~l~~d~~~~~lywtD~-~~~~I~r~~~~g~~~~~v~~~g~ 79 (628)
T 4a0p_A 6 EAFLLFSRRADIRRIS---LETNNN--NVAIPLTGVKEASALDFDVTDNRIYWTDI-SLKTISRAFMNGSALEHVVEFGL 79 (628)
T ss_dssp CCEEEEEETTEEEEEE---SSCTTC--EEECCCCSCSCEEEEEEETTTTEEEEEET-TTTEEEEEETTSCSCEEEECSSC
T ss_pred CcEEEEEeCCcEEEEE---CCCCCc--ceEEEcCCCCceEEEEEECCCCEEEEEEC-CCCeEEEEECCCCCcEEEEeCCC
Confidence 5778887666666666 332221 11123222111111 23345677776664 45677778776554433322221
Q ss_pred CCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCceEEccCCCCeeeccCCcEEE---C
Q 036467 130 DVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKWKKINGGIPYHISSRAAVCF---N 206 (369)
Q Consensus 130 ~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~---~ 206 (369)
. ...+++.|...+ ++.+... ....++++++....=+.+ .. .......++.+ +
T Consensus 80 ~---------~P~GlAvD~~~~--~LY~tD~-----------~~~~I~v~~~dG~~~~~l-~~--~~l~~P~~iavdp~~ 134 (628)
T 4a0p_A 80 D---------YPEGMAVDWLGK--NLYWADT-----------GTNRIEVSKLDGQHRQVL-VW--KDLDSPRALALDPAE 134 (628)
T ss_dssp S---------CCCEEEEETTTT--EEEEEET-----------TTTEEEEEETTSTTCEEE-EC--SSCCCEEEEEEETTT
T ss_pred C---------CcceEEEEeCCC--EEEEEEC-----------CCCEEEEEecCCCcEEEE-Ee--CCCCCcccEEEccCC
Confidence 1 123677776543 3333322 245788888765432222 11 01111123333 6
Q ss_pred ceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE--CCcEEEEEecCCCeEEEEEeccCCCCC
Q 036467 207 ECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF--RGEFAMFHMWREDRVEIWTMKDFGARE 284 (369)
Q Consensus 207 G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~ 284 (369)
|.|||...... ..|..++++...-..+- . .. ..-..|+.. +++||++.... . .|++.+-.+. .
T Consensus 135 G~lY~tD~g~~-----~~I~r~~~dG~~~~~l~-~-~~----~~P~GlalD~~~~~LY~aD~~~-~--~I~~~d~dG~-~ 199 (628)
T 4a0p_A 135 GFMYWTEWGGK-----PKIDRAAMDGSERTTLV-P-NV----GRANGLTIDYAKRRLYWTDLDT-N--LIESSNMLGL-N 199 (628)
T ss_dssp TEEEEEECSSS-----CEEEEEETTSCSCEEEE-C-SC----SSEEEEEEETTTTEEEEEETTT-T--EEEEEETTSC-S
T ss_pred CeEEEeCCCCC-----CEEEEEeCCCCceEEEE-C-CC----CCcceEEEccccCEEEEEECCC-C--EEEEEcCCCC-c
Confidence 99999875421 38999999876655442 1 11 111234443 58899887642 2 4666654332 2
Q ss_pred CeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC-CCeEEEEECCCCeE
Q 036467 285 SWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG-DGELILYDFENEIA 345 (369)
Q Consensus 285 ~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~ydl~~~~~ 345 (369)
. ++ +. ..+ ..|.++ .-. ++.||+... ...+..+|..+++-
T Consensus 200 ~--~v--~~-~~l----------~~P~gl----av~--~~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 200 R--EV--IA-DDL----------PHPFGL----TQY--QDYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp C--EE--EE-ECC----------SCEEEE----EEE--TTEEEEEETTTTEEEEEETTTCCS
T ss_pred e--EE--ee-ccC----------CCceEE----EEE--CCEEEEecCCCCEEEEEECCCCCc
Confidence 2 11 11 111 345555 212 267877764 45689999877653
No 62
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=83.14 E-value=21 Score=30.52 Aligned_cols=207 Identities=11% Similarity=0.029 Sum_probs=98.3
Q ss_pred eecccEEEeeccCCceEEEEcCCccceee-CCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCc
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKK-LPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYE 173 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (369)
..+..+.+... ....+.++|+.|++... ++........... .....++.+++.. ++-.+.-.. ..
T Consensus 98 ~dg~~l~v~~~-~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg-~~l~~~~~~-----------~~ 163 (353)
T 3vgz_A 98 NTTQTLWFGNT-VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVR-PLQPRELVADDAT-NTVYISGIG-----------KE 163 (353)
T ss_dssp TTTTEEEEEET-TTTEEEEEETTTCCEEEEEESCCCCCCSSCC-CCEEEEEEEETTT-TEEEEEEES-----------SS
T ss_pred CCCCEEEEEec-CCCEEEEEeCCCCeeEEEEecCCCccccccC-CCCCceEEECCCC-CEEEEEecC-----------CC
Confidence 33344544442 45789999999987643 3332111100000 1223456666643 332222111 24
Q ss_pred ceEEEEEcCCCceEEccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceee-eCCCCCcCCCCCcee
Q 036467 174 CEARVYSLASDKWKKINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKE-IHRPEYKDSHDKCQI 252 (369)
Q Consensus 174 ~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~ 252 (369)
..+.+++..++.=...-..... ....-.+.-+|...++...+ ..|..+|+.+.+... ++.+.... .....
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~ 234 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTGK-MSTGLALDSEGKRLYTTNAD------GELITIDTADNKILSRKKLLDDGK--EHFFI 234 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCCT-TCCCCEEETTTTEEEEECTT------SEEEEEETTTTEEEEEEECCCSSS--CCCEE
T ss_pred ceEEEEcCCCCceEEEecCCCC-ccceEEECCCCCEEEEEcCC------CeEEEEECCCCeEEEEEEcCCCCC--Ccccc
Confidence 5688888877643222010000 00111133356544444332 278899998876543 34433211 11122
Q ss_pred EEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC
Q 036467 253 EVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG 331 (369)
Q Consensus 253 ~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 331 (369)
.+... +|+..++.......+.+|-++. ...+..++... ...+.+ ..+ |+.+++...
T Consensus 235 ~~~~s~dg~~l~~~~~~~~~v~~~d~~~------~~~~~~~~~~~-----------~~~~~~----s~d--g~~l~v~~~ 291 (353)
T 3vgz_A 235 NISLDTARQRAFITDSKAAEVLVVDTRN------GNILAKVAAPE-----------SLAVLF----NPA--RNEAYVTHR 291 (353)
T ss_dssp EEEEETTTTEEEEEESSSSEEEEEETTT------CCEEEEEECSS-----------CCCEEE----ETT--TTEEEEEET
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEECCC------CcEEEEEEcCC-----------CceEEE----CCC--CCEEEEEEC
Confidence 33443 4653344433445777776543 22333443211 112344 444 355777663
Q ss_pred -CCeEEEEECCCCeEEE
Q 036467 332 -DGELILYDFENEIATD 347 (369)
Q Consensus 332 -~~~~~~ydl~~~~~~~ 347 (369)
++.+..||+++++...
T Consensus 292 ~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 292 QAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp TTTEEEEEETTTTEEEE
T ss_pred CCCeEEEEECCCCeEEE
Confidence 5679999999888644
No 63
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=82.77 E-value=26 Score=31.24 Aligned_cols=195 Identities=10% Similarity=-0.009 Sum_probs=96.8
Q ss_pred eecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcc
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYEC 174 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (369)
..+|.|...+. ....++.+++.++....+-..... ...++.+|+..+. +.+... ...
T Consensus 125 ~~~~~ly~~D~-~~~~I~r~~~~g~~~~~~~~~~~~---------~p~glavd~~~g~--lY~~d~-----------~~~ 181 (386)
T 3v65_B 125 HRRELVFWSDV-TLDRILRANLNGSNVEEVVSTGLE---------SPGGLAVDWVHDK--LYWTDS-----------GTS 181 (386)
T ss_dssp TTTTEEEEEET-TTTEEEEEETTSCCEEEEECSSCS---------CCCCEEEETTTTE--EEEEET-----------TTT
T ss_pred cCCCeEEEEeC-CCCcEEEEecCCCCcEEEEeCCCC---------CccEEEEEeCCCe--EEEEcC-----------CCC
Confidence 45677766664 456788888887655443222111 1125566654332 222221 133
Q ss_pred eEEEEEcCCCceEEccCCCCeeeccCCcEE---ECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCce
Q 036467 175 EARVYSLASDKWKKINGGIPYHISSRAAVC---FNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQ 251 (369)
Q Consensus 175 ~~~vys~~t~~W~~~~~~~p~~~~~~~~v~---~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~ 251 (369)
.+++++.....-+.+ ... ......++. .+|.|||...... ..|..+|++...-..+-. ... ..-
T Consensus 182 ~I~~~~~dg~~~~~l-~~~--~l~~P~giavdp~~g~ly~td~~~~-----~~I~r~~~dG~~~~~~~~-~~~----~~P 248 (386)
T 3v65_B 182 RIEVANLDGAHRKVL-LWQ--SLEKPRAIALHPMEGTIYWTDWGNT-----PRIEASSMDGSGRRIIAD-THL----FWP 248 (386)
T ss_dssp EEEECBTTSCSCEEE-ECS--SCSCEEEEEEETTTTEEEEEECSSS-----CEEEEEETTSCSCEEEEC-SSC----SCE
T ss_pred eEEEEeCCCCceEEe-ecC--CCCCCcEEEEEcCCCeEEEeccCCC-----CEEEEEeCCCCCcEEEEE-CCC----CCe
Confidence 566666654332222 110 011112232 2689999976541 289999998754444311 111 112
Q ss_pred eEEEEE--CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEE
Q 036467 252 IEVGVF--RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIE 329 (369)
Q Consensus 252 ~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 329 (369)
..|+.. +|+||++.... . .|++.+-.+... ..+-... ...|.+++. . . +.||+.
T Consensus 249 nGlavd~~~~~lY~aD~~~-~--~I~~~d~dG~~~-----~~~~~~~----------~~~P~giav--~-~---~~ly~t 304 (386)
T 3v65_B 249 NGLTIDYAGRRMYWVDAKH-H--VIERANLDGSHR-----KAVISQG----------LPHPFAITV--F-E---DSLYWT 304 (386)
T ss_dssp EEEEEEGGGTEEEEEETTT-T--EEEEECTTSCSC-----EEEECSS----------CSSEEEEEE--E-T---TEEEEE
T ss_pred eeEEEeCCCCEEEEEECCC-C--EEEEEeCCCCee-----EEEEECC----------CCCceEEEE--E-C---CEEEEe
Confidence 234443 68898887532 2 466666433211 1111111 135666522 2 2 677776
Q ss_pred EC-CCeEEEEECCCCe-EEEeE
Q 036467 330 KG-DGELILYDFENEI-ATDFK 349 (369)
Q Consensus 330 ~~-~~~~~~ydl~~~~-~~~v~ 349 (369)
.. ...|..+|..+++ .+.+.
T Consensus 305 d~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 305 DWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp ETTTTEEEEEETTTCCSCEEEE
T ss_pred eCCCCeEEEEECCCCcceEEEc
Confidence 64 4569999954444 44443
No 64
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=82.66 E-value=21 Score=30.15 Aligned_cols=141 Identities=7% Similarity=-0.067 Sum_probs=77.9
Q ss_pred EEEEEcCCCceEEccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcce-eeeCCCCCcCCCCCceeEE
Q 036467 176 ARVYSLASDKWKKINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEF-KEIHRPEYKDSHDKCQIEV 254 (369)
Q Consensus 176 ~~vys~~t~~W~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~l 254 (369)
+.+++..+++=... . ++...+...-...++.+|.+..... .+..||.++.+- ..++.+... ..|
T Consensus 77 v~~iD~~Tgkv~~~-~-l~~~~FgeGit~~g~~Ly~ltw~~~------~v~V~D~~Tl~~~~ti~~~~eG-------wGL 141 (268)
T 3nok_A 77 LRQLSLESAQPVWM-E-RLGNIFAEGLASDGERLYQLTWTEG------LLFTWSGMPPQRERTTRYSGEG-------WGL 141 (268)
T ss_dssp EEECCSSCSSCSEE-E-ECTTCCEEEEEECSSCEEEEESSSC------EEEEEETTTTEEEEEEECSSCC-------CCE
T ss_pred EEEEECCCCcEEeE-E-CCCCcceeEEEEeCCEEEEEEccCC------EEEEEECCcCcEEEEEeCCCce-------eEE
Confidence 78888887643222 1 1211111112455678988877653 899999987544 456665432 234
Q ss_pred EEECCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC-CC
Q 036467 255 GVFRGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG-DG 333 (369)
Q Consensus 255 ~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~ 333 (369)
...+++|++... +=.|++++- ++=..+.+|....-. .......-+.. . + |+|+.... ..
T Consensus 142 t~Dg~~L~vSdG----s~~l~~iDp----~T~~v~~~I~V~~~g----~~v~~lNeLe~----~-d---G~lyanvw~s~ 201 (268)
T 3nok_A 142 CYWNGKLVRSDG----GTMLTFHEP----DGFALVGAVQVKLRG----QPVELINELEC----A-N---GVIYANIWHSS 201 (268)
T ss_dssp EEETTEEEEECS----SSEEEEECT----TTCCEEEEEECEETT----EECCCEEEEEE----E-T---TEEEEEETTCS
T ss_pred ecCCCEEEEECC----CCEEEEEcC----CCCeEEEEEEeCCCC----cccccccccEE----e-C---CEEEEEECCCC
Confidence 444567777643 225788874 223345555542210 00001122233 2 4 68887664 45
Q ss_pred eEEEEECCCCeE-EEeEEe
Q 036467 334 ELILYDFENEIA-TDFKIQ 351 (369)
Q Consensus 334 ~~~~ydl~~~~~-~~v~~~ 351 (369)
.+...|++|+++ +++...
T Consensus 202 ~I~vIDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 202 DVLEIDPATGTVVGVIDAS 220 (268)
T ss_dssp EEEEECTTTCBEEEEEECH
T ss_pred eEEEEeCCCCcEEEEEECC
Confidence 699999999986 555543
No 65
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=82.65 E-value=22 Score=30.37 Aligned_cols=146 Identities=11% Similarity=0.042 Sum_probs=67.1
Q ss_pred cceEEEEEcCCCceEEccCCCCeeeccCCcEEE-----CceEEEEeecCCCCCceeEEEEEECCCcceee-eCCCCCcCC
Q 036467 173 ECEARVYSLASDKWKKINGGIPYHISSRAAVCF-----NECLIWKASRGLGRGMTVLVVAFDMNREEFKE-IHRPEYKDS 246 (369)
Q Consensus 173 ~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~-----~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~ 246 (369)
...+.+|+..++.=... ......+ ..+.+ +|.....+..+. .|..||+.+.+-.. +..... ..
T Consensus 189 d~~i~i~d~~~~~~~~~-~~~~~~v---~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~-~~ 257 (357)
T 3i2n_A 189 NGDIKLFDLRNMALRWE-TNIKNGV---CSLEFDRKDISMNKLVATSLEG------KFHVFDMRTQHPTKGFASVSE-KA 257 (357)
T ss_dssp TSEEEEEETTTTEEEEE-EECSSCE---EEEEESCSSSSCCEEEEEESTT------EEEEEEEEEEETTTEEEEEEE-EC
T ss_pred CCeEEEEECccCceeee-cCCCCce---EEEEcCCCCCCCCEEEEECCCC------eEEEEeCcCCCcccceeeecc-CC
Confidence 35788888887653222 1111000 11222 455555554432 78888887643211 110000 00
Q ss_pred CCCceeEEEEEC-CcEEEEEecCCCeEEEEEeccCCCC-------------CCeeEEEEEcccccccccccccceeeeeE
Q 036467 247 HDKCQIEVGVFR-GEFAMFHMWREDRVEIWTMKDFGAR-------------ESWTRMFVIGRRALINFDNYAFVHLKPVC 312 (369)
Q Consensus 247 ~~~~~~~l~~~~-G~L~~~~~~~~~~~~iW~l~~~~~~-------------~~W~~~~~i~~~~~~~~~~~~~~~~~~~~ 312 (369)
+......+.-.. |+-+++.......+.+|.++..... ..+..+..+....- ...-+.
T Consensus 258 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~v~~~~ 328 (357)
T 3i2n_A 258 HKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQ---------PISSLD 328 (357)
T ss_dssp CSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSS---------CEEEEE
T ss_pred CcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCC---------CeeEEE
Confidence 111122333333 5534444444569999998753211 12344444432211 133344
Q ss_pred EeeeccCCCCCCeEEE-EECCCeEEEEECCCCe
Q 036467 313 EMMNLSNGNGKNFLLI-EKGDGELILYDFENEI 344 (369)
Q Consensus 313 ~~~~~~~~~~~~~i~~-~~~~~~~~~ydl~~~~ 344 (369)
+ ..+ |..+++ ...++.+..||+++.+
T Consensus 329 ~----s~~--~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 329 W----SPD--KRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp E----CSS--STTEEEEEETTSEEEEEEECC--
T ss_pred E----cCC--CCeEEEEecCCCcEEEEECCCcc
Confidence 4 444 244543 4456779999998653
No 66
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=82.53 E-value=27 Score=31.30 Aligned_cols=144 Identities=13% Similarity=0.169 Sum_probs=71.5
Q ss_pred EEeeecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCC
Q 036467 92 ISGSCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDS 171 (369)
Q Consensus 92 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 171 (369)
.+...+.+|+... .++.+.|||..+++...--... ......+.+++ + .++.. .
T Consensus 178 ~l~~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~h---------~~~v~~l~~~~---~-~l~s~-s----------- 230 (435)
T 1p22_A 178 CLQYDERVIITGS--SDSTVRVWDVNTGEMLNTLIHH---------CEAVLHLRFNN---G-MMVTC-S----------- 230 (435)
T ss_dssp EEECCSSEEEEEE--TTSCEEEEESSSCCEEEEECCC---------CSCEEEEECCT---T-EEEEE-E-----------
T ss_pred EEEECCCEEEEEc--CCCeEEEEECCCCcEEEEEcCC---------CCcEEEEEEcC---C-EEEEe-e-----------
Confidence 3333333444333 5778999999887654321111 11222334432 2 22222 2
Q ss_pred CcceEEEEEcCCCceE----EccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCC
Q 036467 172 YECEARVYSLASDKWK----KINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSH 247 (369)
Q Consensus 172 ~~~~~~vys~~t~~W~----~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~ 247 (369)
....+.+++..++.-. .. ..... .-..+..+|.....+..+. .|..+|+.+.+.... +....
T Consensus 231 ~dg~i~vwd~~~~~~~~~~~~~-~~~~~---~v~~~~~~~~~l~s~~~dg------~i~vwd~~~~~~~~~-~~~~~--- 296 (435)
T 1p22_A 231 KDRSIAVWDMASPTDITLRRVL-VGHRA---AVNVVDFDDKYIVSASGDR------TIKVWNTSTCEFVRT-LNGHK--- 296 (435)
T ss_dssp TTSCEEEEECSSSSCCEEEEEE-CCCSS---CEEEEEEETTEEEEEETTS------EEEEEETTTCCEEEE-EECCS---
T ss_pred CCCcEEEEeCCCCCCceeeeEe-cCCCC---cEEEEEeCCCEEEEEeCCC------eEEEEECCcCcEEEE-EcCCC---
Confidence 2456788888765321 11 11000 0112455676666555542 899999988754332 11111
Q ss_pred CCceeEEEEECCcEEEEEecCCCeEEEEEecc
Q 036467 248 DKCQIEVGVFRGEFAMFHMWREDRVEIWTMKD 279 (369)
Q Consensus 248 ~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~ 279 (369)
..+.-...+|.+.+.... ...+.+|-+..
T Consensus 297 --~~v~~~~~~~~~l~~g~~-dg~i~iwd~~~ 325 (435)
T 1p22_A 297 --RGIACLQYRDRLVVSGSS-DNTIRLWDIEC 325 (435)
T ss_dssp --SCEEEEEEETTEEEEEET-TSCEEEEETTT
T ss_pred --CcEEEEEeCCCEEEEEeC-CCeEEEEECCC
Confidence 122333446666665554 45899998864
No 67
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=82.38 E-value=22 Score=30.18 Aligned_cols=194 Identities=8% Similarity=0.037 Sum_probs=94.5
Q ss_pred cccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceE
Q 036467 97 NGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEA 176 (369)
Q Consensus 97 ~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 176 (369)
.+.+++... ..+.+.++|+.|++....-..+. . .. ++.+++.. ++ ++.... ....+
T Consensus 9 ~~~~~v~~~-~~~~v~~~d~~~~~~~~~~~~~~--------~-~~-~~~~s~dg-~~-l~~~~~-----------~~~~i 64 (331)
T 3u4y_A 9 SNFGIVVEQ-HLRRISFFSTDTLEILNQITLGY--------D-FV-DTAITSDC-SN-VVVTSD-----------FCQTL 64 (331)
T ss_dssp CCEEEEEEG-GGTEEEEEETTTCCEEEEEECCC--------C-EE-EEEECSSS-CE-EEEEES-----------TTCEE
T ss_pred CCEEEEEec-CCCeEEEEeCcccceeeeEEccC--------C-cc-eEEEcCCC-CE-EEEEeC-----------CCCeE
Confidence 344444442 46789999999988765322211 1 22 56666543 23 222222 13478
Q ss_pred EEEEcCCCce--EEcc-CCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCcee
Q 036467 177 RVYSLASDKW--KKIN-GGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQI 252 (369)
Q Consensus 177 ~vys~~t~~W--~~~~-~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~ 252 (369)
.+++..++.- +.+. ...|.. .-.+.-+|...+....... ...|..+|+.+.+.... +.+.. ..
T Consensus 65 ~~~d~~~~~~~~~~~~~~~~~~~---~~~~s~dg~~l~~~~~~~~---~~~i~v~d~~~~~~~~~~~~~~~-------~~ 131 (331)
T 3u4y_A 65 VQIETQLEPPKVVAIQEGQSSMA---DVDITPDDQFAVTVTGLNH---PFNMQSYSFLKNKFISTIPIPYD-------AV 131 (331)
T ss_dssp EEEECSSSSCEEEEEEECSSCCC---CEEECTTSSEEEECCCSSS---SCEEEEEETTTTEEEEEEECCTT-------EE
T ss_pred EEEECCCCceeEEecccCCCCcc---ceEECCCCCEEEEecCCCC---cccEEEEECCCCCeEEEEECCCC-------cc
Confidence 8888887753 2220 111111 0012234553333322211 12788999988765332 32211 12
Q ss_pred EEEEE-CCc-EEEEEecCCCeEEEEEeccCCCCCCeeE-EEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEE
Q 036467 253 EVGVF-RGE-FAMFHMWREDRVEIWTMKDFGARESWTR-MFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIE 329 (369)
Q Consensus 253 ~l~~~-~G~-L~~~~~~~~~~~~iW~l~~~~~~~~W~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 329 (369)
.+... +|+ |++........+.+|.++..+ ..... ...+.. ......+.+ ..+ |..+++.
T Consensus 132 ~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g--~~~~~~~~~~~~----------~~~~~~~~~----spd--g~~l~v~ 193 (331)
T 3u4y_A 132 GIAISPNGNGLILIDRSSANTVRRFKIDADG--VLFDTGQEFISG----------GTRPFNITF----TPD--GNFAFVA 193 (331)
T ss_dssp EEEECTTSSCEEEEEETTTTEEEEEEECTTC--CEEEEEEEEECS----------SSSEEEEEE----CTT--SSEEEEE
T ss_pred ceEECCCCCEEEEEecCCCceEEEEEECCCC--cEeecCCccccC----------CCCccceEE----CCC--CCEEEEE
Confidence 33333 465 555555433239999998532 11111 111111 011233444 555 3457666
Q ss_pred EC-CCeEEEEECCCCeE
Q 036467 330 KG-DGELILYDFENEIA 345 (369)
Q Consensus 330 ~~-~~~~~~ydl~~~~~ 345 (369)
.. +..+..||+++++.
T Consensus 194 ~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 194 NLIGNSIGILETQNPEN 210 (331)
T ss_dssp ETTTTEEEEEECSSTTS
T ss_pred eCCCCeEEEEECCCCcc
Confidence 53 45699999998874
No 68
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=82.19 E-value=25 Score=30.79 Aligned_cols=145 Identities=9% Similarity=0.070 Sum_probs=68.0
Q ss_pred eecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcc
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYEC 174 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (369)
+.+|.++... ..+.+.+|+..+++....-... ......+.+.+.. .+- +. .. ...
T Consensus 215 ~~~~~~~~~~--~~g~i~~~d~~~~~~~~~~~~~---------~~~i~~~~~~~~~-~~l-~~-~~-----------~d~ 269 (425)
T 1r5m_A 215 VDDDKFVIPG--PKGAIFVYQITEKTPTGKLIGH---------HGPISVLEFNDTN-KLL-LS-AS-----------DDG 269 (425)
T ss_dssp EETTEEEEEC--GGGCEEEEETTCSSCSEEECCC---------SSCEEEEEEETTT-TEE-EE-EE-----------TTS
T ss_pred cCCCEEEEEc--CCCeEEEEEcCCCceeeeeccC---------CCceEEEEECCCC-CEE-EE-Ec-----------CCC
Confidence 3455555444 5678999998886544321111 1122345555533 222 22 22 234
Q ss_pred eEEEEEcCCCceEEccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCceeE
Q 036467 175 EARVYSLASDKWKKINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQIE 253 (369)
Q Consensus 175 ~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~ 253 (369)
.+.+|+..++.-...-......+ ..-...-+| ....+..+ ..|..+|+.+.+.... ..... ....
T Consensus 270 ~i~i~d~~~~~~~~~~~~~~~~i-~~~~~~~~~-~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~------~i~~ 335 (425)
T 1r5m_A 270 TLRIWHGGNGNSQNCFYGHSQSI-VSASWVGDD-KVISCSMD------GSVRLWSLKQNTLLALSIVDGV------PIFA 335 (425)
T ss_dssp CEEEECSSSBSCSEEECCCSSCE-EEEEEETTT-EEEEEETT------SEEEEEETTTTEEEEEEECTTC------CEEE
T ss_pred EEEEEECCCCccceEecCCCccE-EEEEECCCC-EEEEEeCC------CcEEEEECCCCcEeEecccCCc------cEEE
Confidence 57788776643221101111000 000022256 33333333 2899999987654332 22111 1122
Q ss_pred EEEE-CCcEEEEEecCCCeEEEEEecc
Q 036467 254 VGVF-RGEFAMFHMWREDRVEIWTMKD 279 (369)
Q Consensus 254 l~~~-~G~L~~~~~~~~~~~~iW~l~~ 279 (369)
+.-. +|++.++... ...+.+|-++.
T Consensus 336 ~~~s~~~~~l~~~~~-dg~i~i~~~~~ 361 (425)
T 1r5m_A 336 GRISQDGQKYAVAFM-DGQVNVYDLKK 361 (425)
T ss_dssp EEECTTSSEEEEEET-TSCEEEEECHH
T ss_pred EEEcCCCCEEEEEEC-CCeEEEEECCC
Confidence 2222 3666555553 45899999875
No 69
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=81.38 E-value=35 Score=33.89 Aligned_cols=62 Identities=16% Similarity=0.231 Sum_probs=39.4
Q ss_pred ECceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCceeEEEEECCcEEEEEecCCCeEEEEEecc
Q 036467 205 FNECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVFRGEFAMFHMWREDRVEIWTMKD 279 (369)
Q Consensus 205 ~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~ 279 (369)
.+|.|||..... ..|..+|+....-..+ ..+... .....|...+++||++... .-.|++.+.
T Consensus 568 ~~~~LYwaD~~~------~~I~~~d~dG~~~~~v~~~~~~l----~~P~glav~~~~lYwtD~~---~~~I~~~dk 630 (791)
T 3m0c_C 568 LSGRLYWVDSKL------HSISSIDVNGGNRKTILEDEKRL----AHPFSLAVFEDKVFWTDII---NEAIFSANR 630 (791)
T ss_dssp TTTEEEEEETTT------TEEEEEETTSCSCEEEEECTTTT----SSEEEEEEETTEEEEEETT---TTEEEEEET
T ss_pred CCCeEEEEeCCC------CcEEEEecCCCceEEEecCCCcc----CCCCEEEEeCCEEEEEECC---CCEEEEEeC
Confidence 369999997554 3899999987654444 222211 1345677788999888743 234666654
No 70
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=81.01 E-value=25 Score=29.84 Aligned_cols=150 Identities=7% Similarity=0.035 Sum_probs=75.2
Q ss_pred cceEEEEEcCC-CceEEcc---CCCCeeeccCCcEE--ECce-EEEEeecCCCCCceeEEEEEECC--Ccceee---e-C
Q 036467 173 ECEARVYSLAS-DKWKKIN---GGIPYHISSRAAVC--FNEC-LIWKASRGLGRGMTVLVVAFDMN--REEFKE---I-H 239 (369)
Q Consensus 173 ~~~~~vys~~t-~~W~~~~---~~~p~~~~~~~~v~--~~G~-lyw~~~~~~~~~~~~~il~fD~~--~e~~~~---i-~ 239 (369)
...+.+|+..+ +...... ...+... ....+. -+|. +|...... ..|..+|+. +.++.. + .
T Consensus 150 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pdg~~l~~~~~~~------~~i~~~~~~~~~g~~~~~~~~~~ 222 (343)
T 1ri6_A 150 QDRICLFTVSDDGHLVAQDPAEVTTVEGA-GPRHMVFHPNEQYAYCVNELN------SSVDVWELKDPHGNIECVQTLDM 222 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEEEECSTTC-CEEEEEECTTSSEEEEEETTT------TEEEEEESSCTTSCCEEEEEEEC
T ss_pred CCEEEEEEecCCCceeeecccccccCCCC-CcceEEECCCCCEEEEEeCCC------CEEEEEEecCCCCcEEEEeeccc
Confidence 34688888877 6665320 0000000 001122 2565 55544333 278888885 344432 2 2
Q ss_pred CCCCcCCCCCcee-EEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeec
Q 036467 240 RPEYKDSHDKCQI-EVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNL 317 (369)
Q Consensus 240 ~P~~~~~~~~~~~-~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (369)
+|.... ....+ .+... +|+..++.......+.+|.++.. +..+..+..++.... ...+.+
T Consensus 223 ~~~~~~--~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~--~~~~~~~~~~~~~~~----------~~~~~~---- 284 (343)
T 1ri6_A 223 MPENFS--DTRWAADIHITPDGRHLYACDRTASLITVFSVSED--GSVLSKEGFQPTETQ----------PRGFNV---- 284 (343)
T ss_dssp SCTTCC--SCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT--SCCEEEEEEEECSSS----------CCCEEE----
T ss_pred cCcccc--ccCCccceEECCCCCEEEEEecCCCEEEEEEEcCC--CCceEEeeeecCCCc----------cceEEE----
Confidence 444321 01122 23333 36554545544568999999752 234666666553221 233455
Q ss_pred cCCCCCCeEEEEEC-CCeEEEE--ECCCCeEEEeE
Q 036467 318 SNGNGKNFLLIEKG-DGELILY--DFENEIATDFK 349 (369)
Q Consensus 318 ~~~~~~~~i~~~~~-~~~~~~y--dl~~~~~~~v~ 349 (369)
..+ |..+++... ++.+..| |.++++++.+.
T Consensus 285 s~d--g~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 285 DHS--GKYLIAAGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp CTT--SSEEEEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred CCC--CCEEEEecCCCCeEEEEEEcCCCceeeEcc
Confidence 555 344555542 3556666 88898887775
No 71
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=80.88 E-value=26 Score=30.13 Aligned_cols=193 Identities=8% Similarity=-0.028 Sum_probs=97.1
Q ss_pred ecccEEEeeccCCceEEEEcCCcccee-eCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcc
Q 036467 96 CNGLLCISDQSCNEDIFLFNPSTKKYK-KLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYEC 174 (369)
Q Consensus 96 ~~GLl~~~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (369)
.++.+.+... ..+.+.|+|+.|++.. .+|... ... ++.+++. + ++..... ...
T Consensus 52 ~~~~lyv~~~-~~~~v~viD~~t~~~~~~i~~~~---------~p~--~i~~~~~--g-~lyv~~~-----------~~~ 105 (328)
T 3dsm_A 52 RDGIGWIVVN-NSHVIFAIDINTFKEVGRITGFT---------SPR--YIHFLSD--E-KAYVTQI-----------WDY 105 (328)
T ss_dssp ETTEEEEEEG-GGTEEEEEETTTCCEEEEEECCS---------SEE--EEEEEET--T-EEEEEEB-----------SCS
T ss_pred ECCEEEEEEc-CCCEEEEEECcccEEEEEcCCCC---------CCc--EEEEeCC--C-eEEEEEC-----------CCC
Confidence 4565544442 4678999999998874 464321 112 3444332 3 4444332 245
Q ss_pred eEEEEEcCCCceE-Ecc-CCCC-eeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceee-eCCCCCcCCCCCc
Q 036467 175 EARVYSLASDKWK-KIN-GGIP-YHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKE-IHRPEYKDSHDKC 250 (369)
Q Consensus 175 ~~~vys~~t~~W~-~~~-~~~p-~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~ 250 (369)
.+.+++..+++-. .+. .... .......-+..+|.+|....... ..|..+|+.+.+... ++.+... .
T Consensus 106 ~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~-----~~v~viD~~t~~~~~~i~~g~~p-----~ 175 (328)
T 3dsm_A 106 RIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQ-----NRILKIDTETDKVVDELTIGIQP-----T 175 (328)
T ss_dssp EEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTC-----CEEEEEETTTTEEEEEEECSSCB-----C
T ss_pred eEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCC-----CEEEEEECCCCeEEEEEEcCCCc-----c
Confidence 7888898887543 221 1100 00011112346788888765211 289999999876543 4443221 1
Q ss_pred eeEEEEE-CCcEEEEEecCCC-------eEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCC
Q 036467 251 QIEVGVF-RGEFAMFHMWRED-------RVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNG 322 (369)
Q Consensus 251 ~~~l~~~-~G~L~~~~~~~~~-------~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (369)
. +... +|+++++...... .-.|++++.. +. ....++....- ....-+.+ ..+
T Consensus 176 ~--i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~--t~--~v~~~~~~~~g--------~~p~~la~----~~d-- 235 (328)
T 3dsm_A 176 S--LVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE--TF--TVEKQFKFKLG--------DWPSEVQL----NGT-- 235 (328)
T ss_dssp C--CEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT--TT--EEEEEEECCTT--------CCCEEEEE----CTT--
T ss_pred c--eEEcCCCCEEEEECCCccCCccccCCceEEEEECC--CC--eEEEEEecCCC--------CCceeEEE----ecC--
Confidence 1 2223 4887776643210 1345555531 12 22333332110 01233444 444
Q ss_pred CCeEEEEECCCeEEEEECCCCeEE
Q 036467 323 KNFLLIEKGDGELILYDFENEIAT 346 (369)
Q Consensus 323 ~~~i~~~~~~~~~~~ydl~~~~~~ 346 (369)
++.+|+. .. .++.+|++++++.
T Consensus 236 ~~~lyv~-~~-~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 236 RDTLYWI-NN-DIWRMPVEADRVP 257 (328)
T ss_dssp SCEEEEE-SS-SEEEEETTCSSCC
T ss_pred CCEEEEE-cc-EEEEEECCCCcee
Confidence 2455554 44 6999999988864
No 72
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=80.51 E-value=45 Score=32.58 Aligned_cols=191 Identities=9% Similarity=0.090 Sum_probs=91.7
Q ss_pred eecc-cEEEeeccCCceEEEEcCCccceee-CCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCC
Q 036467 95 SCNG-LLCISDQSCNEDIFLFNPSTKKYKK-LPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSY 172 (369)
Q Consensus 95 s~~G-Ll~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 172 (369)
+.+| +|.... .++.+.|||..+++... +.... .....+.+.+. +.+ ++ ... .
T Consensus 64 s~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~~~~~----------~~v~~~~~s~~-~~~-l~-~~~-----------~ 117 (814)
T 3mkq_A 64 IARKNWIIVGS--DDFRIRVFNYNTGEKVVDFEAHP----------DYIRSIAVHPT-KPY-VL-SGS-----------D 117 (814)
T ss_dssp EGGGTEEEEEE--TTSEEEEEETTTCCEEEEEECCS----------SCEEEEEECSS-SSE-EE-EEE-----------T
T ss_pred eCCCCEEEEEe--CCCeEEEEECCCCcEEEEEecCC----------CCEEEEEEeCC-CCE-EE-EEc-----------C
Confidence 4444 344444 57899999998877654 22111 12223444443 222 22 222 2
Q ss_pred cceEEEEEcCCC-ceEEccCCCCeeeccCCcEEE---CceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCC
Q 036467 173 ECEARVYSLASD-KWKKINGGIPYHISSRAAVCF---NECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSH 247 (369)
Q Consensus 173 ~~~~~vys~~t~-~W~~~~~~~p~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~ 247 (369)
...+.+|+..++ .....-...... -..+.+ +|.....+..+. .|..+|+.+.+-... ..+...
T Consensus 118 dg~i~vw~~~~~~~~~~~~~~~~~~---v~~~~~~p~~~~~l~~~~~dg------~v~vwd~~~~~~~~~~~~~~~~--- 185 (814)
T 3mkq_A 118 DLTVKLWNWENNWALEQTFEGHEHF---VMCVAFNPKDPSTFASGCLDR------TVKVWSLGQSTPNFTLTTGQER--- 185 (814)
T ss_dssp TSEEEEEEGGGTSEEEEEEECCSSC---EEEEEEETTEEEEEEEEETTS------EEEEEETTCSSCSEEEECCCTT---
T ss_pred CCEEEEEECCCCceEEEEEcCCCCc---EEEEEEEcCCCCEEEEEeCCC------eEEEEECCCCcceeEEecCCCC---
Confidence 456888888765 332220111100 011222 455555554442 788999876544322 222111
Q ss_pred CCceeEEEEE---CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCC
Q 036467 248 DKCQIEVGVF---RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKN 324 (369)
Q Consensus 248 ~~~~~~l~~~---~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (369)
....+.-. +|.+.++.. ....+.+|-++. ...+..+....- ....+.+ ..+ |.
T Consensus 186 --~v~~~~~~~~~~~~~l~~~~-~dg~i~~~d~~~------~~~~~~~~~~~~---------~v~~~~~----~~~--~~ 241 (814)
T 3mkq_A 186 --GVNYVDYYPLPDKPYMITAS-DDLTIKIWDYQT------KSCVATLEGHMS---------NVSFAVF----HPT--LP 241 (814)
T ss_dssp --CCCEEEECCSTTCCEEEEEC-TTSEEEEEETTT------TEEEEEEECCSS---------CEEEEEE----CSS--SS
T ss_pred --CEEEEEEEECCCCCEEEEEe-CCCEEEEEECCC------CcEEEEEcCCCC---------CEEEEEE----cCC--CC
Confidence 11122222 565555544 455899997764 223333322111 1233344 444 24
Q ss_pred eEEEEECCCeEEEEECCCCeEEE
Q 036467 325 FLLIEKGDGELILYDFENEIATD 347 (369)
Q Consensus 325 ~i~~~~~~~~~~~ydl~~~~~~~ 347 (369)
.++....++.+..||+.+++...
T Consensus 242 ~l~~~~~dg~v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 242 IIISGSEDGTLKIWNSSTYKVEK 264 (814)
T ss_dssp EEEEEETTSCEEEEETTTCSEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEE
Confidence 44444555679999999876543
No 73
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=80.06 E-value=50 Score=32.79 Aligned_cols=139 Identities=9% Similarity=-0.041 Sum_probs=73.5
Q ss_pred cceEEEEEcCCCceEEccCCCCeeeccCCcEEE---CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCC
Q 036467 173 ECEARVYSLASDKWKKINGGIPYHISSRAAVCF---NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDK 249 (369)
Q Consensus 173 ~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~ 249 (369)
...++++++....-+.+ .... +....++.+ +|.|||...... ..|..++++...-..+-. ... .
T Consensus 492 ~~~I~v~~ldG~~~~~l-~~~~--l~~P~gIaVDp~~g~LYwtD~g~~-----~~I~~~~~dG~~~~~lv~-~~l----~ 558 (791)
T 3m0c_C 492 LGTVSVADTKGVKRKTL-FREN--GSKPRAIVVDPVHGFMYWTDWGTP-----AKIKKGGLNGVDIYSLVT-ENI----Q 558 (791)
T ss_dssp TTEEEEEETTSSSEEEE-EECT--TCCEEEEEEETTTTEEEEEECSSS-----CEEEEEETTSCCEEEEEC-SSC----S
T ss_pred CCeEEEEeCCCCeEEEE-EeCC--CCCcceEEEecCCCCEEEecCCCC-----CeEEEEecCCCceEEEEe-CCC----C
Confidence 45788888876655544 1100 111123444 589999985431 289999998765544421 111 1
Q ss_pred ceeEEEEE--CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEE
Q 036467 250 CQIEVGVF--RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLL 327 (369)
Q Consensus 250 ~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 327 (369)
.-..|+.. +|+||++... .. .|++.+-.+. .....+ .... ....|+++ .-. ++.||
T Consensus 559 ~P~GLavD~~~~~LYwaD~~-~~--~I~~~d~dG~-~~~~v~---~~~~---------~l~~P~gl----av~--~~~lY 616 (791)
T 3m0c_C 559 WPNGITLDLLSGRLYWVDSK-LH--SISSIDVNGG-NRKTIL---EDEK---------RLAHPFSL----AVF--EDKVF 616 (791)
T ss_dssp CEEEEEEETTTTEEEEEETT-TT--EEEEEETTSC-SCEEEE---ECTT---------TTSSEEEE----EEE--TTEEE
T ss_pred CceEEEEecCCCeEEEEeCC-CC--cEEEEecCCC-ceEEEe---cCCC---------ccCCCCEE----EEe--CCEEE
Confidence 12234444 6899998653 22 4666664332 222221 1111 11355565 222 26787
Q ss_pred EEECC-CeEEEEECCCCeEE
Q 036467 328 IEKGD-GELILYDFENEIAT 346 (369)
Q Consensus 328 ~~~~~-~~~~~ydl~~~~~~ 346 (369)
+.... ..|...|..+++-.
T Consensus 617 wtD~~~~~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 617 WTDIINEAIFSANRLTGSDV 636 (791)
T ss_dssp EEETTTTEEEEEETTTCCCC
T ss_pred EEECCCCEEEEEeCCCCcce
Confidence 77643 46888997777543
No 74
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=79.24 E-value=26 Score=29.07 Aligned_cols=192 Identities=14% Similarity=0.212 Sum_probs=94.7
Q ss_pred eecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcc
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYEC 174 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (369)
..+|-+.+........+.++|+..+....+..... ....++.+|+.. +++.... ...
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~---------~~~~~i~~~~~g---~l~v~~~-----------~~~ 142 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL---------QHPRGVTVDNKG---RIIVVEC-----------KVM 142 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTC---------SCEEEEEECTTS---CEEEEET-----------TTT
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccC---------CCceEEEEeCCC---CEEEEEC-----------CCC
Confidence 35676666652125789999965554444433221 122356666642 2322221 234
Q ss_pred eEEEEEcCCCceEEccCCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCcee
Q 036467 175 EARVYSLASDKWKKINGGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQI 252 (369)
Q Consensus 175 ~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~ 252 (369)
.+.+|+.....-+.+.... ......++.+ +|.+|+..... ..|..||...+....+..+... ..-.
T Consensus 143 ~i~~~~~~g~~~~~~~~~~--~~~~p~~i~~~~~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~g~~----~~p~ 210 (286)
T 1q7f_A 143 RVIIFDQNGNVLHKFGCSK--HLEFPNGVVVNDKQEIFISDNRA------HCVKVFNYEGQYLRQIGGEGIT----NYPI 210 (286)
T ss_dssp EEEEECTTSCEEEEEECTT--TCSSEEEEEECSSSEEEEEEGGG------TEEEEEETTCCEEEEESCTTTS----CSEE
T ss_pred EEEEEcCCCCEEEEeCCCC--ccCCcEEEEECCCCCEEEEECCC------CEEEEEcCCCCEEEEEccCCcc----CCCc
Confidence 6777776544433331110 0001122333 58877765543 2899999977655555433211 1122
Q ss_pred EEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC
Q 036467 253 EVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG 331 (369)
Q Consensus 253 ~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 331 (369)
.++.. +|.|++........+.+|-.+ + . .+..+..... ...|.+++. ..+ |.+++...
T Consensus 211 ~i~~d~~G~l~v~~~~~~~~i~~~~~~--g--~---~~~~~~~~~~---------~~~~~~i~~--~~~---g~l~vs~~ 269 (286)
T 1q7f_A 211 GVGINSNGEILIADNHNNFNLTIFTQD--G--Q---LISALESKVK---------HAQCFDVAL--MDD---GSVVLASK 269 (286)
T ss_dssp EEEECTTCCEEEEECSSSCEEEEECTT--S--C---EEEEEEESSC---------CSCEEEEEE--ETT---TEEEEEET
T ss_pred EEEECCCCCEEEEeCCCCEEEEEECCC--C--C---EEEEEcccCC---------CCcceeEEE--CCC---CcEEEECC
Confidence 34443 588887765322366666421 1 1 2223322111 112333311 445 78888766
Q ss_pred CCeEEEEECCC
Q 036467 332 DGELILYDFEN 342 (369)
Q Consensus 332 ~~~~~~ydl~~ 342 (369)
+..+..|++..
T Consensus 270 ~~~v~v~~~~~ 280 (286)
T 1q7f_A 270 DYRLYIYRYVQ 280 (286)
T ss_dssp TTEEEEEECSC
T ss_pred CCeEEEEEccc
Confidence 66788888754
No 75
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=78.75 E-value=33 Score=29.91 Aligned_cols=198 Identities=7% Similarity=-0.050 Sum_probs=84.7
Q ss_pred eecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcc
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYEC 174 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (369)
+.+|.++... ..+.+.|||..+++........... + ......+.+.|. +.+ ++. .. ...
T Consensus 103 s~d~~~l~~s--~dg~v~lWd~~~~~~~~~~~~~~~~--h---~~~V~~v~~spd-g~~-l~s-gs-----------~dg 161 (357)
T 4g56_B 103 VSEKGILVAS--DSGAVELWEILEKESLLVNKFAKYE--H---DDIVKTLSVFSD-GTQ-AVS-GG-----------KDF 161 (357)
T ss_dssp ETTTEEEEEE--TTSCEEEC--------CCCCEEECC--C---SSCEEEEEECSS-SSE-EEE-EE-----------TTS
T ss_pred cCCCCEEEEE--CCCEEEEeeccccceeEEEeeccCC--C---CCCEEEEEECCC-CCE-EEE-Ee-----------CCC
Confidence 4455554444 5678999999988765443322111 0 112234444442 223 222 22 235
Q ss_pred eEEEEEcCCCceEEccCCCCeeeccCCcEEE--Cce-EEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCc
Q 036467 175 EARVYSLASDKWKKINGGIPYHISSRAAVCF--NEC-LIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKC 250 (369)
Q Consensus 175 ~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~ 250 (369)
.+.+++..++.-...-...... -..+.+ +|. +...+..+. .|..+|+.+.+-... ...... ..
T Consensus 162 ~v~iwd~~~~~~~~~~~~h~~~---v~~v~~s~~~~~~~~s~~~dg------~v~~wd~~~~~~~~~~~~~~~~----~~ 228 (357)
T 4g56_B 162 SVKVWDLSQKAVLKSYNAHSSE---VNCVAACPGKDTIFLSCGEDG------RILLWDTRKPKPATRIDFCASD----TI 228 (357)
T ss_dssp CEEEEETTTTEEEEEECCCSSC---EEEEEECTTCSSCEEEEETTS------CEEECCTTSSSCBCBCCCTTCC----SC
T ss_pred eEEEEECCCCcEEEEEcCCCCC---EEEEEEccCCCceeeeeccCC------ceEEEECCCCceeeeeeecccc----cc
Confidence 6788888776443220110000 011222 232 333333331 688888887654222 222111 11
Q ss_pred eeEEEEE--CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEE
Q 036467 251 QIEVGVF--RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLI 328 (369)
Q Consensus 251 ~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 328 (369)
...+.-. ++.+.+... ....+.+|-+... ..+..+.... .....+.+ ..+ ++.++.
T Consensus 229 v~~v~~sp~~~~~la~g~-~d~~i~~wd~~~~------~~~~~~~~~~---------~~v~~l~~----sp~--~~~~la 286 (357)
T 4g56_B 229 PTSVTWHPEKDDTFACGD-ETGNVSLVNIKNP------DSAQTSAVHS---------QNITGLAY----SYH--SSPFLA 286 (357)
T ss_dssp EEEEEECTTSTTEEEEEE-SSSCEEEEESSCG------GGCEEECCCS---------SCEEEEEE----CSS--SSCCEE
T ss_pred ccchhhhhcccceEEEee-cccceeEEECCCC------cEeEEEeccc---------eeEEEEEE----cCC--CCCEEE
Confidence 1222222 345555444 4458999987641 1122222111 11233344 333 244444
Q ss_pred E-ECCCeEEEEECCCCeEEEe
Q 036467 329 E-KGDGELILYDFENEIATDF 348 (369)
Q Consensus 329 ~-~~~~~~~~ydl~~~~~~~v 348 (369)
. ..++.+.+||+++++....
T Consensus 287 sgs~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 287 SISEDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp EEETTSCEEEECTTSCEEEEE
T ss_pred EEeCCCEEEEEECCCCcEeEE
Confidence 3 4456699999998876543
No 76
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=76.61 E-value=36 Score=29.33 Aligned_cols=139 Identities=8% Similarity=-0.021 Sum_probs=69.5
Q ss_pred cceEEEEEcCCCceEEccCCCCeeeccCCcEEE---CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCC
Q 036467 173 ECEARVYSLASDKWKKINGGIPYHISSRAAVCF---NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDK 249 (369)
Q Consensus 173 ~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~ 249 (369)
...+++++.....=+.+ .. .......++.+ +|.|||...... ..|..+|++...-..+-- ... .
T Consensus 100 ~~~I~~~~~dG~~~~~l-~~--~~~~~P~giavdp~~g~ly~td~~~~-----~~I~r~~~dG~~~~~~~~-~~l----~ 166 (318)
T 3sov_A 100 TNRIEVSNLDGSLRKVL-FW--QELDQPRAIALDPSSGFMYWTDWGEV-----PKIERAGMDGSSRFIIIN-SEI----Y 166 (318)
T ss_dssp TTEEEEEETTSCSCEEE-EC--SSCSSEEEEEEEGGGTEEEEEECSSS-----CEEEEEETTSCSCEEEEC-SSC----S
T ss_pred CCEEEEEECCCCcEEEE-Ee--CCCCCccEEEEeCCCCEEEEEecCCC-----CEEEEEEcCCCCeEEEEE-CCC----C
Confidence 35677777765432332 11 00111123333 589999875421 289999998654333311 111 1
Q ss_pred ceeEEEEE--CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEE
Q 036467 250 CQIEVGVF--RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLL 327 (369)
Q Consensus 250 ~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 327 (369)
.-..|+.. +|+||++... .. .|+..+-.+... ..+-... ...|.+++. . . +.+|
T Consensus 167 ~Pnglavd~~~~~lY~aD~~-~~--~I~~~d~dG~~~-----~~~~~~~----------~~~P~glav--~-~---~~ly 222 (318)
T 3sov_A 167 WPNGLTLDYEEQKLYWADAK-LN--FIHKSNLDGTNR-----QAVVKGS----------LPHPFALTL--F-E---DILY 222 (318)
T ss_dssp CEEEEEEETTTTEEEEEETT-TT--EEEEEETTSCSC-----EEEECSC----------CSCEEEEEE--E-T---TEEE
T ss_pred CccEEEEeccCCEEEEEECC-CC--EEEEEcCCCCce-----EEEecCC----------CCCceEEEE--e-C---CEEE
Confidence 12234444 5888888653 23 455555333211 1111111 245666521 2 2 5777
Q ss_pred EEEC-CCeEEEEECCCCeE-EEe
Q 036467 328 IEKG-DGELILYDFENEIA-TDF 348 (369)
Q Consensus 328 ~~~~-~~~~~~ydl~~~~~-~~v 348 (369)
.... ...+..+|..+++. +.+
T Consensus 223 wtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 223 WTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp EEETTTTEEEEEETTTCCSCEEE
T ss_pred EEecCCCeEEEEECCCCCceEEE
Confidence 7654 35699999976653 444
No 77
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=76.45 E-value=40 Score=29.72 Aligned_cols=98 Identities=9% Similarity=0.064 Sum_probs=49.9
Q ss_pred EEEEEECCCcceee-eCCCCCcCCCCCceeEEEEE-CCcEEEEE-ecCCCeEEEEEeccCCCCCCeeEEEEEcccccccc
Q 036467 224 LVVAFDMNREEFKE-IHRPEYKDSHDKCQIEVGVF-RGEFAMFH-MWREDRVEIWTMKDFGARESWTRMFVIGRRALINF 300 (369)
Q Consensus 224 ~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~l~~~-~G~L~~~~-~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~ 300 (369)
.|..+|+.+.+... +..+.. ...+.-. +|+..++. ......+.||.++. ........+.....
T Consensus 285 ~i~i~d~~~~~~~~~~~~~~~-------v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~----~~~~~~~~~~~h~~--- 350 (401)
T 4aez_A 285 QIHFWNAATGARVNTVDAGSQ-------VTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS----SGLTKQVDIPAHDT--- 350 (401)
T ss_dssp EEEEEETTTCCEEEEEECSSC-------EEEEEECSSSSEEEEEECTTTCEEEEEEEET----TEEEEEEEEECCSS---
T ss_pred EEEEEECCCCCEEEEEeCCCc-------EEEEEECCCCCeEEEEeecCCCcEEEEecCC----ccceeEEEecCCCC---
Confidence 78888988765433 222111 1222222 46555543 44567999999875 23444444432211
Q ss_pred cccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCCeEEE
Q 036467 301 DNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENEIATD 347 (369)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~~~~~ 347 (369)
...-+.+ ..+ |..|+....++.+..||+.+++...
T Consensus 351 ------~v~~~~~----s~d--g~~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 351 ------RVLYSAL----SPD--GRILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp ------CCCEEEE----CTT--SSEEEEECTTSEEEEEECCC-----
T ss_pred ------CEEEEEE----CCC--CCEEEEEeCCCcEEEEECCCCcccc
Confidence 1233444 445 2344444456679999999887543
No 78
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=76.28 E-value=36 Score=29.17 Aligned_cols=191 Identities=16% Similarity=0.174 Sum_probs=87.7
Q ss_pred CCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCce
Q 036467 107 CNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKW 186 (369)
Q Consensus 107 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W 186 (369)
..+.+.+||..++++..+-..... ......+.+.+. +.+-+. .. ....+.+|+..++.+
T Consensus 28 ~d~~v~i~~~~~~~~~~~~~~~~h-------~~~v~~~~~~~~-~~~l~~--~~-----------~dg~i~vwd~~~~~~ 86 (372)
T 1k8k_C 28 NNHEVHIYEKSGNKWVQVHELKEH-------NGQVTGVDWAPD-SNRIVT--CG-----------TDRNAYVWTLKGRTW 86 (372)
T ss_dssp SSSEEEEEEEETTEEEEEEEEECC-------SSCEEEEEEETT-TTEEEE--EE-----------TTSCEEEEEEETTEE
T ss_pred CCCEEEEEeCCCCcEEeeeeecCC-------CCcccEEEEeCC-CCEEEE--Ec-----------CCCeEEEEECCCCee
Confidence 467889999888753222211111 112234455552 333222 22 235688899888877
Q ss_pred EEccCCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcc-e---eeeCCCCCcCCCCCceeEEEEE-CC
Q 036467 187 KKINGGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREE-F---KEIHRPEYKDSHDKCQIEVGVF-RG 259 (369)
Q Consensus 187 ~~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~-~---~~i~~P~~~~~~~~~~~~l~~~-~G 259 (369)
.......... ..-..+.+ +|.....+..+. .|..+|+.+.. + ..+..+... ....+.-. +|
T Consensus 87 ~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~------~v~i~d~~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~ 154 (372)
T 1k8k_C 87 KPTLVILRIN-RAARCVRWAPNEKKFAVGSGSR------VISICYFEQENDWWVCKHIKKPIRS-----TVLSLDWHPNS 154 (372)
T ss_dssp EEEEECCCCS-SCEEEEEECTTSSEEEEEETTS------SEEEEEEETTTTEEEEEEECTTCCS-----CEEEEEECTTS
T ss_pred eeeEEeecCC-CceeEEEECCCCCEEEEEeCCC------EEEEEEecCCCcceeeeeeecccCC-----CeeEEEEcCCC
Confidence 5441101100 00011222 455544444432 56677776654 2 222222111 12233333 46
Q ss_pred cEEEEEecCCCeEEEEEeccCC-----CCCCee-------EEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEE
Q 036467 260 EFAMFHMWREDRVEIWTMKDFG-----ARESWT-------RMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLL 327 (369)
Q Consensus 260 ~L~~~~~~~~~~~~iW~l~~~~-----~~~~W~-------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 327 (369)
.+.+... ....+.+|-+.... ....|. .+..+... ......+.+ ..+ +..++
T Consensus 155 ~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~----~~~--~~~l~ 218 (372)
T 1k8k_C 155 VLLAAGS-CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS---------CGWVHGVCF----SAN--GSRVA 218 (372)
T ss_dssp SEEEEEE-TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC---------SSCEEEEEE----CSS--SSEEE
T ss_pred CEEEEEc-CCCCEEEEEcccccccccccccccccccchhhheEecCCC---------CCeEEEEEE----CCC--CCEEE
Confidence 6555554 35589999875211 011122 22222110 011233334 444 24555
Q ss_pred EEECCCeEEEEECCCCeEE
Q 036467 328 IEKGDGELILYDFENEIAT 346 (369)
Q Consensus 328 ~~~~~~~~~~ydl~~~~~~ 346 (369)
....++.+..||+++++..
T Consensus 219 ~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 219 WVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp EEETTTEEEEEEGGGTTEE
T ss_pred EEeCCCEEEEEECCCCcee
Confidence 5566677999999877643
No 79
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=76.16 E-value=30 Score=32.79 Aligned_cols=121 Identities=7% Similarity=0.103 Sum_probs=64.2
Q ss_pred CCcEEECceEEEEee-cCCCCCceeEEEEEEC-CCc--ceeeeCCCCCcC-----CCCCceeEEEEECCcEEEEEecCCC
Q 036467 200 RAAVCFNECLIWKAS-RGLGRGMTVLVVAFDM-NRE--EFKEIHRPEYKD-----SHDKCQIEVGVFRGEFAMFHMWRED 270 (369)
Q Consensus 200 ~~~v~~~G~lyw~~~-~~~~~~~~~~il~fD~-~~e--~~~~i~~P~~~~-----~~~~~~~~l~~~~G~L~~~~~~~~~ 270 (369)
..++..+|.+|.... .+ .|.++|. .+. .|+.- ++.... .+......++..+|++++... ..
T Consensus 56 ~~P~v~~g~vyv~~~~~~-------~v~AlD~~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--dg 125 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFPN-------NTYALNLNDPGKIVWQHK-PKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA--NG 125 (571)
T ss_dssp SCCEEETTEEEEECSTTT-------CEEEEETTCTTSEEEEEC-CCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--TS
T ss_pred cccEEECCEEEEEeCCCC-------EEEEEeCCCCccEEEEEc-CCCCccccccccccccccccEEECCEEEEEeC--CC
Confidence 345889999999876 43 7999999 654 56542 222110 000011224556777776542 22
Q ss_pred eEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC------CCeEEEEECCCCe
Q 036467 271 RVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG------DGELILYDFENEI 344 (369)
Q Consensus 271 ~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~ydl~~~~ 344 (369)
.+..++-...+..|.... ..... .......|+.. + +.|++... ++.++.||.+|++
T Consensus 126 --~l~alD~~tG~~~W~~~~--~~~~~-----~~~~~~~P~v~------~---g~v~vg~~~~~~~~~g~v~a~D~~tG~ 187 (571)
T 2ad6_A 126 --HLLALDAKTGKINWEVEV--CDPKV-----GSTLTQAPFVA------K---DTVLMGCSGAELGVRGAVNAFDLKTGE 187 (571)
T ss_dssp --EEEEEETTTCCEEEEEEC--CCGGG-----TCBCCSCCEEE------T---TEEEEECBCGGGTCCCEEEEEETTTCC
T ss_pred --EEEEEECCCCCEEEEecC--CCCCc-----cceeccCCEEE------C---CEEEEEecCCccCCCCEEEEEECCCCc
Confidence 355555322345576532 11000 00111234433 3 66766543 3569999999988
Q ss_pred EEEe
Q 036467 345 ATDF 348 (369)
Q Consensus 345 ~~~v 348 (369)
..+-
T Consensus 188 ~~W~ 191 (571)
T 2ad6_A 188 LKWR 191 (571)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6653
No 80
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=75.96 E-value=37 Score=29.12 Aligned_cols=98 Identities=16% Similarity=0.275 Sum_probs=53.0
Q ss_pred EEEEEECCCcceeee-CCCCCcCCCCCceeEEEEEC----CcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccc
Q 036467 224 LVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVFR----GEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALI 298 (369)
Q Consensus 224 ~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~----G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~ 298 (369)
.|..+|+..++...+ .+.... ..+.-+.+. |.+.+.... ...+.+|-++. ..|..+..+.....
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~~~l~s~~~-dg~v~iwd~~~----~~~~~~~~~~~~~~- 102 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGHE-----GPVWRVDWAHPKFGTILASCSY-DGKVLIWKEEN----GRWSQIAVHAVHSA- 102 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCS-----SCEEEEEECCGGGCSEEEEEET-TSCEEEEEEET----TEEEEEEEECCCSS-
T ss_pred cEEEEecCCCcceeeeEecCCC-----CcEEEEEeCCCCCCCEEEEecc-CCEEEEEEcCC----CceeEeeeecCCCc-
Confidence 677788775555444 222211 122223332 566555554 45899999985 34666655543221
Q ss_pred cccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCCe
Q 036467 299 NFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENEI 344 (369)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~~ 344 (369)
....+.+ ..++.+..++....++.+..||++++.
T Consensus 103 --------~v~~~~~----~~~~~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 103 --------SVNSVQW----APHEYGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp --------CEEEEEE----CCGGGCSEEEEEETTSEEEEEECCTTS
T ss_pred --------ceEEEEe----CCCCCCCEEEEecCCCcEEEEecCCCC
Confidence 1233333 221112456666667779999998874
No 81
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=75.56 E-value=36 Score=29.98 Aligned_cols=25 Identities=20% Similarity=0.178 Sum_probs=18.5
Q ss_pred CeEEEEECCCeEEEEECCCCeEEEe
Q 036467 324 NFLLIEKGDGELILYDFENEIATDF 348 (369)
Q Consensus 324 ~~i~~~~~~~~~~~ydl~~~~~~~v 348 (369)
+.+++...++.++.+|.++++..+-
T Consensus 174 ~~v~~~~~dg~v~a~d~~tG~~~W~ 198 (369)
T 2hz6_A 174 MSHFVSNGDGLVVTVDSESGDVLWI 198 (369)
T ss_dssp CCEEEEETSCEEEEECTTTCCEEEE
T ss_pred ceEEEECCCCEEEEEECCCCcEEEE
Confidence 5677766667799999988886543
No 82
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=75.12 E-value=41 Score=30.16 Aligned_cols=112 Identities=9% Similarity=0.089 Sum_probs=59.4
Q ss_pred ECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE-CCc-EEEEEecCCCeEEEEEeccCCC
Q 036467 205 FNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF-RGE-FAMFHMWREDRVEIWTMKDFGA 282 (369)
Q Consensus 205 ~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~G~-L~~~~~~~~~~~~iW~l~~~~~ 282 (369)
-+|.+||..... ..|..+|+.+.....+...... .. ++.. +|+ |++... ... -.||+++..+
T Consensus 140 ~~g~lyv~d~~~------~~I~~id~~~g~~~~~~~~~~~----~~---ia~~~~g~~l~~~d~-~~~-~~I~~~d~~~- 203 (409)
T 3hrp_A 140 GNNTVLAYQRDD------PRVRLISVDDNKVTTVHPGFKG----GK---PAVTKDKQRVYSIGW-EGT-HTVYVYMKAS- 203 (409)
T ss_dssp STTEEEEEETTT------TEEEEEETTTTEEEEEEETCCB----CB---CEECTTSSEEEEEBS-STT-CEEEEEEGGG-
T ss_pred CCCCEEEEecCC------CcEEEEECCCCEEEEeeccCCC----Cc---eeEecCCCcEEEEec-CCC-ceEEEEEcCC-
Confidence 478999988654 2899999998877665322111 11 2332 344 444433 222 1677776522
Q ss_pred CCCee--EEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCCeEEEe
Q 036467 283 RESWT--RMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENEIATDF 348 (369)
Q Consensus 283 ~~~W~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~~~~~v 348 (369)
.|. ....+..... ....-+.+ ..+ ++.||+....+.++.||++++....+
T Consensus 204 --~~~~~~~g~~~~~~~--------~~p~~iav----~p~--~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 204 --GWAPTRIGQLGSTFS--------GKIGAVAL----DET--EEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp --TTCEEEEEECCTTSC--------SCCCBCEE----CTT--SSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred --CceeEEeeeccchhc--------CCcEEEEE----eCC--CCeEEEEECCCcEEEEECCCCCEEEE
Confidence 243 2211111011 11222344 432 27888855555699999998876555
No 83
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=74.13 E-value=43 Score=29.02 Aligned_cols=197 Identities=9% Similarity=-0.033 Sum_probs=91.1
Q ss_pred eecccEEEeeccCCceEEEEcCCccceeeCCCCCC-CCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCc
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEF-DVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYE 173 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~-~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (369)
+-++.++... .++.+.|||..+++......... ... .....+.+.+. +.+ ++. .. ..
T Consensus 91 s~d~~l~~~s--~dg~v~lWd~~~~~~~~~~~~~~~~H~------~~V~~v~~spd-g~~-l~s-gs-----------~d 148 (344)
T 4gqb_B 91 VGERGILVAS--DSGAVELWELDENETLIVSKFCKYEHD------DIVSTVSVLSS-GTQ-AVS-GS-----------KD 148 (344)
T ss_dssp ETTTEEEEEE--TTSEEEEEEECTTSSCEEEEEEEECCS------SCEEEEEECTT-SSE-EEE-EE-----------TT
T ss_pred eCCCeEEEEE--CCCEEEEEeccCCCceeEeeccccCCC------CCEEEEEECCC-CCE-EEE-Ee-----------CC
Confidence 4456555444 57889999998877544322111 111 12223444443 222 222 22 23
Q ss_pred ceEEEEEcCCCceEEccCCCCeeeccCCcEEE--Cce-EEEEeecCCCCCceeEEEEEECCCcceee-eCCCCCcCCCCC
Q 036467 174 CEARVYSLASDKWKKINGGIPYHISSRAAVCF--NEC-LIWKASRGLGRGMTVLVVAFDMNREEFKE-IHRPEYKDSHDK 249 (369)
Q Consensus 174 ~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~ 249 (369)
..+.+++..++.=...-......+ ..+.+ +|. +...+..+. .|..+|+.+.+-.. +..+... .
T Consensus 149 ~~i~iwd~~~~~~~~~~~~h~~~V---~~~~~~~~~~~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~~----~ 215 (344)
T 4gqb_B 149 ICIKVWDLAQQVVLSSYRAHAAQV---TCVAASPHKDSVFLSCSEDN------RILLWDTRCPKPASQIGCSAPG----Y 215 (344)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCE---EEEEECSSCTTEEEEEETTS------CEEEEETTSSSCEEECC----C----C
T ss_pred CeEEEEECCCCcEEEEEcCcCCce---EEEEecCCCCCceeeecccc------ccccccccccceeeeeecceee----c
Confidence 467888887763321101100000 01222 332 333333332 68889998765433 2222221 1
Q ss_pred ceeEEEEE--CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEE
Q 036467 250 CQIEVGVF--RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLL 327 (369)
Q Consensus 250 ~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 327 (369)
....+.-. ++++.+... ....+.||-+... ..+.++.... ....-+.+ ..+ |..++
T Consensus 216 ~~~~~~~~p~~~~~l~sg~-~dg~v~~wd~~~~------~~~~~~~~h~---------~~v~~v~f----sp~--g~~~l 273 (344)
T 4gqb_B 216 LPTSLAWHPQQSEVFVFGD-ENGTVSLVDTKST------SCVLSSAVHS---------QCVTGLVF----SPH--SVPFL 273 (344)
T ss_dssp CEEEEEECSSCTTEEEEEE-TTSEEEEEESCC--------CCEEEECCS---------SCEEEEEE----CSS--SSCCE
T ss_pred cceeeeecCCCCcceEEec-cCCcEEEEECCCC------cEEEEEcCCC---------CCEEEEEE----ccC--CCeEE
Confidence 11223322 355555544 4568999977641 1222222111 11233444 444 23444
Q ss_pred E-EECCCeEEEEECCCCeEEEe
Q 036467 328 I-EKGDGELILYDFENEIATDF 348 (369)
Q Consensus 328 ~-~~~~~~~~~ydl~~~~~~~v 348 (369)
. ...++.+.+||++++++.+.
T Consensus 274 asgs~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 274 ASLSEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp EEEETTSCEEEECTTCCEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEE
Confidence 4 34556699999999876543
No 84
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=73.40 E-value=46 Score=28.94 Aligned_cols=67 Identities=15% Similarity=0.155 Sum_probs=34.8
Q ss_pred EEEEecCCCeEEEEEeccCCCCCCeeEEEEEcc---cccccccccccceeeeeEEeeeccCCCCCCeEEEEECC---CeE
Q 036467 262 AMFHMWREDRVEIWTMKDFGARESWTRMFVIGR---RALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGD---GEL 335 (369)
Q Consensus 262 ~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~ 335 (369)
.++.......+.+|-+... ..+..+.. ... .......+.+ ..+ +..++....+ +.+
T Consensus 199 ~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~h~~------~~~~i~~i~~----~~~--~~~l~~~~~d~~~g~i 260 (397)
T 1sq9_A 199 LIATGFNNGTVQISELSTL------RPLYNFESQHSMIN------NSNSIRSVKF----SPQ--GSLLAIAHDSNSFGCI 260 (397)
T ss_dssp EEEEECTTSEEEEEETTTT------EEEEEEECCC---C------CCCCEEEEEE----CSS--TTEEEEEEEETTEEEE
T ss_pred eEEEEeCCCcEEEEECCCC------ceeEEEeccccccc------cCCccceEEE----CCC--CCEEEEEecCCCCceE
Confidence 5555555678999988741 23333332 100 0111333444 444 2444444444 579
Q ss_pred EEEECCCCeEE
Q 036467 336 ILYDFENEIAT 346 (369)
Q Consensus 336 ~~ydl~~~~~~ 346 (369)
..||+++++..
T Consensus 261 ~i~d~~~~~~~ 271 (397)
T 1sq9_A 261 TLYETEFGERI 271 (397)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCccc
Confidence 99999887643
No 85
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=73.37 E-value=51 Score=29.46 Aligned_cols=60 Identities=17% Similarity=0.258 Sum_probs=37.8
Q ss_pred CceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCceeEEEEECCcEEEEEecCCCeEEEEEec
Q 036467 206 NECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVFRGEFAMFHMWREDRVEIWTMK 278 (369)
Q Consensus 206 ~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~ 278 (369)
+|.|||..... ..|.++|++...-..+ ..+... .....|...++.|++.... .. .|++.+
T Consensus 257 ~~~lY~aD~~~------~~I~~~d~dG~~~~~~~~~~~~l----~~P~gl~v~~~~lywtd~~-~~--~V~~~~ 317 (400)
T 3p5b_L 257 SGRLYWVDSKL------HSISSIDVNGGNRKTILEDEKRL----AHPFSLAVFEDKVFWTDII-NE--AIFSAN 317 (400)
T ss_dssp TTEEEEEETTT------TEEEEEETTSCCCEEEEECSSTT----SSEEEEEEETTEEEEEESS-SC--SEEEEE
T ss_pred CCEEEEEECCC------CEEEEEeCCCCccEEEEeCCCCC----CCCEEEEEeCCEEEEecCC-CC--eEEEEE
Confidence 68999997654 2899999987554444 322222 1234567788899888743 22 356655
No 86
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=73.25 E-value=29 Score=30.03 Aligned_cols=141 Identities=9% Similarity=0.050 Sum_probs=64.0
Q ss_pred cceEEEEEcCCCceEEccCCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcc-eeee-CCCCCcCCCC
Q 036467 173 ECEARVYSLASDKWKKINGGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREE-FKEI-HRPEYKDSHD 248 (369)
Q Consensus 173 ~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~-~~~i-~~P~~~~~~~ 248 (369)
...+.+|+..++.|+.+ ..+......-..+.+ +|.....+..+. .|..+|+.++. +... .+....
T Consensus 32 d~~i~iw~~~~~~~~~~-~~~~~h~~~v~~~~~s~~~~~l~s~s~d~------~v~vwd~~~~~~~~~~~~~~~~~---- 100 (377)
T 3dwl_C 32 TNQVELYEQDGNGWKHA-RTFSDHDKIVTCVDWAPKSNRIVTCSQDR------NAYVYEKRPDGTWKQTLVLLRLN---- 100 (377)
T ss_dssp SSCBCEEEEETTEEEEC-CCBCCCSSCEEEEEECTTTCCEEEEETTS------SEEEC------CCCCEEECCCCS----
T ss_pred CCEEEEEEccCCceEEE-EEEecCCceEEEEEEeCCCCEEEEEeCCC------eEEEEEcCCCCceeeeeEecccC----
Confidence 45677888888888766 332211000011222 354444444332 68888888876 4333 222111
Q ss_pred CceeEEEEE--CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeE
Q 036467 249 KCQIEVGVF--RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFL 326 (369)
Q Consensus 249 ~~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 326 (369)
..+.-+.+ +|++.+.... ...+.+|-++. +..|.....+....- .....+.+ ..+ +..+
T Consensus 101 -~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~---~~~~~~~~~~~~~h~--------~~v~~~~~----~~~--~~~l 161 (377)
T 3dwl_C 101 -RAATFVRWSPNEDKFAVGSG-ARVISVCYFEQ---ENDWWVSKHLKRPLR--------STILSLDW----HPN--NVLL 161 (377)
T ss_dssp -SCEEEEECCTTSSCCEEEES-SSCEEECCC--------CCCCEEECSSCC--------SCEEEEEE----CTT--SSEE
T ss_pred -CceEEEEECCCCCEEEEEec-CCeEEEEEECC---cccceeeeEeecccC--------CCeEEEEE----cCC--CCEE
Confidence 12222222 4665555443 45899998875 234655555543110 11333444 444 2444
Q ss_pred EEEECCCeEEEEECCCC
Q 036467 327 LIEKGDGELILYDFENE 343 (369)
Q Consensus 327 ~~~~~~~~~~~ydl~~~ 343 (369)
+....++.+..||++++
T Consensus 162 ~~~~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 162 AAGCADRKAYVLSAYVR 178 (377)
T ss_dssp EEEESSSCEEEEEECCS
T ss_pred EEEeCCCEEEEEEEEec
Confidence 44455666999998643
No 87
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=73.01 E-value=43 Score=28.44 Aligned_cols=214 Identities=12% Similarity=0.082 Sum_probs=100.2
Q ss_pred eecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcc
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYEC 174 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (369)
+.+|-|.+... ....++++|+.+++...+..... ....++.+++.. +++.... .......
T Consensus 53 ~~~g~l~~~~~-~~~~i~~~d~~~~~~~~~~~~~~---------~~~~~i~~~~dg---~l~v~~~-------~~~~~~~ 112 (333)
T 2dg1_A 53 DRQGQLFLLDV-FEGNIFKINPETKEIKRPFVSHK---------ANPAAIKIHKDG---RLFVCYL-------GDFKSTG 112 (333)
T ss_dssp CTTSCEEEEET-TTCEEEEECTTTCCEEEEEECSS---------SSEEEEEECTTS---CEEEEEC-------TTSSSCC
T ss_pred CCCCCEEEEEC-CCCEEEEEeCCCCcEEEEeeCCC---------CCcceEEECCCC---cEEEEeC-------CCCCCCc
Confidence 45666654432 45689999999988776532111 122355566543 2222221 0001124
Q ss_pred eEEEEEcCCCceEEccCCCCeeeccCCcEE--ECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCcee
Q 036467 175 EARVYSLASDKWKKINGGIPYHISSRAAVC--FNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQI 252 (369)
Q Consensus 175 ~~~vys~~t~~W~~~~~~~p~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~ 252 (369)
.+.+|+..++.-+......... .....+. -+|.+|+.............|..+|..++++..+.- .. ....
T Consensus 113 ~i~~~d~~~~~~~~~~~~~~~~-~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~----~~~~ 185 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIEDLSTA-YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--NI----SVAN 185 (333)
T ss_dssp EEEEECTTSCSCEEEECSSSSC-CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE--EE----SSEE
T ss_pred eEEEEeCCCCEEEEEEccCccC-CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec--CC----Cccc
Confidence 6777887776554220111100 0011122 267777655431100112378899988776655421 11 0111
Q ss_pred EEEEE-CCc-EEEEEecCCCeEEEEEeccCCCCCCeeEEE-EEcccccccccccccceeeeeEEeeeccCCCCCCeEEEE
Q 036467 253 EVGVF-RGE-FAMFHMWREDRVEIWTMKDFGARESWTRMF-VIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIE 329 (369)
Q Consensus 253 ~l~~~-~G~-L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 329 (369)
.+... +|+ |++... ....+.+|-++..+ ....... .+.. ... . ......+.+ ..+ |.+++.
T Consensus 186 ~i~~~~dg~~l~v~~~-~~~~i~~~d~~~~g--~~~~~~~~~~~~-~~~----~-~~~~~~i~~----d~~---G~l~v~ 249 (333)
T 2dg1_A 186 GIALSTDEKVLWVTET-TANRLHRIALEDDG--VTIQPFGATIPY-YFT----G-HEGPDSCCI----DSD---DNLYVA 249 (333)
T ss_dssp EEEECTTSSEEEEEEG-GGTEEEEEEECTTS--SSEEEEEEEEEE-ECC----S-SSEEEEEEE----BTT---CCEEEE
T ss_pred ceEECCCCCEEEEEeC-CCCeEEEEEecCCC--cCcccccceEEE-ecC----C-CCCCCceEE----CCC---CCEEEE
Confidence 23333 465 555543 23466666665321 2222211 1110 000 0 001222444 445 678776
Q ss_pred EC-CCeEEEEECCCCeEEEeEEe
Q 036467 330 KG-DGELILYDFENEIATDFKIQ 351 (369)
Q Consensus 330 ~~-~~~~~~ydl~~~~~~~v~~~ 351 (369)
.. +..+..||++++..+.+...
T Consensus 250 ~~~~~~v~~~d~~g~~~~~~~~~ 272 (333)
T 2dg1_A 250 MYGQGRVLVFNKRGYPIGQILIP 272 (333)
T ss_dssp EETTTEEEEECTTSCEEEEEECT
T ss_pred EcCCCEEEEECCCCCEEEEEEcC
Confidence 53 45699999987777766543
No 88
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=72.75 E-value=43 Score=28.38 Aligned_cols=26 Identities=8% Similarity=0.311 Sum_probs=15.6
Q ss_pred EEecCCCeEEEEEeccCCCCCCeeEEEEE
Q 036467 264 FHMWREDRVEIWTMKDFGARESWTRMFVI 292 (369)
Q Consensus 264 ~~~~~~~~~~iW~l~~~~~~~~W~~~~~i 292 (369)
+.......+.||-++. ...|..+..+
T Consensus 183 ~sgs~D~~v~lWd~~~---~~~~~~~~~l 208 (316)
T 3bg1_A 183 ASGGCDNLIKLWKEEE---DGQWKEEQKL 208 (316)
T ss_dssp ECCBTTSBCCEEEECT---TSCEEEEECC
T ss_pred EEecCCCeEEEEEeCC---CCccceeeec
Confidence 3333456899999863 2347665543
No 89
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=72.69 E-value=50 Score=29.14 Aligned_cols=70 Identities=9% Similarity=-0.053 Sum_probs=41.7
Q ss_pred CcEEEEEecC------CCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC-
Q 036467 259 GEFAMFHMWR------EDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG- 331 (369)
Q Consensus 259 G~L~~~~~~~------~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~- 331 (369)
++||+..... ...-+||+++- .+...+.+|+.... ...+.+ ..+ |..+++...
T Consensus 279 ~~lyV~~~~~~~~~~~~~~~~V~VID~----~t~~vv~~i~~g~~----------p~~i~~----s~D--g~~~l~v~~~ 338 (373)
T 2mad_H 279 DGIYLLTSEQSAWKLHAAAKEVTSVTG----LVGQTSSQISLGHD----------VDAISV----AQD--GGPDLYALSA 338 (373)
T ss_pred CEEEEEeccCCcccccCCCCeEEEEEC----CCCEEEEEEECCCC----------cCeEEE----CCC--CCeEEEEEcC
Confidence 5677765321 12346888884 45777788864332 233445 555 242555543
Q ss_pred -CCeEEEEECCCCeEEEe
Q 036467 332 -DGELILYDFENEIATDF 348 (369)
Q Consensus 332 -~~~~~~ydl~~~~~~~v 348 (369)
++.+.+||+++++....
T Consensus 339 ~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 339 GTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCCeEEEEECCCCCEEee
Confidence 45699999999886543
No 90
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=72.64 E-value=48 Score=28.90 Aligned_cols=195 Identities=10% Similarity=-0.011 Sum_probs=98.9
Q ss_pred eeecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCc
Q 036467 94 GSCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYE 173 (369)
Q Consensus 94 ~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (369)
...+|.|...+. ....++.+++.++....+...... ...++.+|+..+ ++.+... ..
T Consensus 81 d~~~~~ly~~D~-~~~~I~r~~~~g~~~~~~~~~~~~---------~p~glavd~~~g--~ly~~d~-----------~~ 137 (349)
T 3v64_C 81 HHRRELVFWSDV-TLDRILRANLNGSNVEEVVSTGLE---------SPGGLAVDWVHD--KLYWTDS-----------GT 137 (349)
T ss_dssp ETTTTEEEEEET-TTTEEEEEETTSCSCEEEECSSCS---------CCCEEEEETTTT--EEEEEET-----------TT
T ss_pred eccccEEEEEec-cCCceEEEecCCCCceEEEeCCCC---------CccEEEEecCCC--eEEEEcC-----------CC
Confidence 345677776664 456788888887665444222211 112666776543 2333222 23
Q ss_pred ceEEEEEcCCCceEEccCCCCeeeccCCcEE---ECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCc
Q 036467 174 CEARVYSLASDKWKKINGGIPYHISSRAAVC---FNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKC 250 (369)
Q Consensus 174 ~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~---~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 250 (369)
..+++++.....-+.+ .... .....++. .+|.+||...... ..|..+|++...-..+- .... ..
T Consensus 138 ~~I~~~~~dG~~~~~l-~~~~--l~~P~~iavdp~~g~ly~td~~~~-----~~I~r~~~dG~~~~~~~-~~~~----~~ 204 (349)
T 3v64_C 138 SRIEVANLDGAHRKVL-LWQS--LEKPRAIALHPMEGTIYWTDWGNT-----PRIEASSMDGSGRRIIA-DTHL----FW 204 (349)
T ss_dssp TEEEEEETTSCSCEEE-ECTT--CSCEEEEEEETTTTEEEEEECSSS-----CEEEEEETTSCSCEESC-CSSC----SC
T ss_pred CeEEEEcCCCCceEEE-EeCC--CCCcceEEEecCcCeEEEeccCCC-----CEEEEEeCCCCCcEEEE-ECCC----CC
Confidence 4677777765433333 1100 11112222 2689999986541 28999999875444331 1111 11
Q ss_pred eeEEEEE--CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEE
Q 036467 251 QIEVGVF--RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLI 328 (369)
Q Consensus 251 ~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 328 (369)
-..|+.. +|+||++... .. .|++.+-.+... ..+-... ...|.+++. . . +.||+
T Consensus 205 PnGla~d~~~~~lY~aD~~-~~--~I~~~~~dG~~~-----~~~~~~~----------~~~P~giav--~-~---~~ly~ 260 (349)
T 3v64_C 205 PNGLTIDYAGRRMYWVDAK-HH--VIERANLDGSHR-----KAVISQG----------LPHPFAITV--F-E---DSLYW 260 (349)
T ss_dssp EEEEEEETTTTEEEEEETT-TT--EEEEEETTSCSC-----EEEECSS----------CSSEEEEEE--E-T---TEEEE
T ss_pred cceEEEeCCCCEEEEEECC-CC--EEEEEeCCCCce-----EEEEeCC----------CCCceEEEE--E-C---CEEEE
Confidence 2234554 6788888653 23 455555323211 1111111 135666522 2 3 67877
Q ss_pred EEC-CCeEEEEECCCCe-EEEe
Q 036467 329 EKG-DGELILYDFENEI-ATDF 348 (369)
Q Consensus 329 ~~~-~~~~~~ydl~~~~-~~~v 348 (369)
... ...+..+|..+++ .+.+
T Consensus 261 td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 261 TDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp EETTTTEEEEEETTTCCSCEEE
T ss_pred ecCCCCeEEEEEccCCCccEEe
Confidence 764 3568999954444 4444
No 91
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=71.34 E-value=42 Score=27.61 Aligned_cols=196 Identities=8% Similarity=0.009 Sum_probs=97.6
Q ss_pred eeecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCc
Q 036467 94 GSCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYE 173 (369)
Q Consensus 94 ~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (369)
...+|.|...+. ....++++++.++....+-... .....++.+|+..+ ++..... ..
T Consensus 44 d~~~~~ly~~d~-~~~~I~~~~~~g~~~~~~~~~~---------~~~p~~ia~d~~~~--~lyv~d~-----------~~ 100 (267)
T 1npe_A 44 DCVDKVVYWTDI-SEPSIGRASLHGGEPTTIIRQD---------LGSPEGIALDHLGR--TIFWTDS-----------QL 100 (267)
T ss_dssp ETTTTEEEEEET-TTTEEEEEESSSCCCEEEECTT---------CCCEEEEEEETTTT--EEEEEET-----------TT
T ss_pred ecCCCEEEEEEC-CCCEEEEEecCCCCcEEEEECC---------CCCccEEEEEecCC--eEEEEEC-----------CC
Confidence 344677766663 4568888888776543332111 11234666776433 2222221 23
Q ss_pred ceEEEEEcCCCceEEccCCCCeeeccCCcEEE---CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCc
Q 036467 174 CEARVYSLASDKWKKINGGIPYHISSRAAVCF---NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKC 250 (369)
Q Consensus 174 ~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 250 (369)
..+.+++.....-+.+ .... .....++.+ +|.+||....... ..|..++++......+.. ... ..
T Consensus 101 ~~I~~~~~~g~~~~~~-~~~~--~~~P~~i~vd~~~g~lyv~~~~~~~----~~I~~~~~dg~~~~~~~~-~~~----~~ 168 (267)
T 1npe_A 101 DRIEVAKMDGTQRRVL-FDTG--LVNPRGIVTDPVRGNLYWTDWNRDN----PKIETSHMDGTNRRILAQ-DNL----GL 168 (267)
T ss_dssp TEEEEEETTSCSCEEE-ECSS--CSSEEEEEEETTTTEEEEEECCSSS----CEEEEEETTSCCCEEEEC-TTC----SC
T ss_pred CEEEEEEcCCCCEEEE-EECC--CCCccEEEEeeCCCEEEEEECCCCC----cEEEEEecCCCCcEEEEE-CCC----CC
Confidence 4677777765433333 1111 111122333 6899998754211 278889987655444311 111 11
Q ss_pred eeEEEEE--CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEE
Q 036467 251 QIEVGVF--RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLI 328 (369)
Q Consensus 251 ~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 328 (369)
-..++.. ++.||+.... ... |++++-.+. .....+. . ...|.++ ..+ ++.+++
T Consensus 169 P~gia~d~~~~~lyv~d~~-~~~--I~~~~~~g~----~~~~~~~--~----------~~~P~gi----~~d--~~~lyv 223 (267)
T 1npe_A 169 PNGLTFDAFSSQLCWVDAG-THR--AECLNPAQP----GRRKVLE--G----------LQYPFAV----TSY--GKNLYY 223 (267)
T ss_dssp EEEEEEETTTTEEEEEETT-TTE--EEEEETTEE----EEEEEEE--C----------CCSEEEE----EEE--TTEEEE
T ss_pred CcEEEEcCCCCEEEEEECC-CCE--EEEEecCCC----ceEEEec--C----------CCCceEE----EEe--CCEEEE
Confidence 2233443 4678777653 233 555553211 1111111 1 1245555 222 277888
Q ss_pred EEC-CCeEEEEECCCCeE-EEeE
Q 036467 329 EKG-DGELILYDFENEIA-TDFK 349 (369)
Q Consensus 329 ~~~-~~~~~~ydl~~~~~-~~v~ 349 (369)
... ...+..+|+++++. +.+.
T Consensus 224 a~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 224 TDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC
T ss_pred EECCCCeEEEEeCCCCCceEEEc
Confidence 764 35799999998775 4443
No 92
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=71.26 E-value=51 Score=28.60 Aligned_cols=63 Identities=13% Similarity=0.245 Sum_probs=31.7
Q ss_pred EEEEEECCCcce-eeeCCCCCcCC-------CCCceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEc
Q 036467 224 LVVAFDMNREEF-KEIHRPEYKDS-------HDKCQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIG 293 (369)
Q Consensus 224 ~il~fD~~~e~~-~~i~~P~~~~~-------~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~ 293 (369)
.|..+|+.+.+- ..+..|..... +......+.-. +|++.+... ....+.||-++. ...+..+.
T Consensus 259 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~------~~~~~~~~ 330 (397)
T 1sq9_A 259 CITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG-WDGKLRFWDVKT------KERITTLN 330 (397)
T ss_dssp EEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE-TTSEEEEEETTT------TEEEEEEE
T ss_pred eEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCC------CceeEEEe
Confidence 899999887654 23333211000 01112233332 466655554 456899998864 34455554
No 93
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=71.04 E-value=47 Score=28.06 Aligned_cols=207 Identities=12% Similarity=0.034 Sum_probs=95.8
Q ss_pred eeccc--EEEeeccCCceEEEEcC-CccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCC
Q 036467 95 SCNGL--LCISDQSCNEDIFLFNP-STKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDS 171 (369)
Q Consensus 95 s~~GL--l~~~~~~~~~~~~V~NP-~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 171 (369)
+.+|- |+... ..+.+.+||. .+++...+..... ......+.+.+ +.+-+ ...
T Consensus 65 ~~~~~~~l~~~~--~dg~i~~wd~~~~~~~~~~~~~~~--------~~~v~~l~~~~--~~~l~-s~~------------ 119 (342)
T 1yfq_A 65 IDNTDLQIYVGT--VQGEILKVDLIGSPSFQALTNNEA--------NLGICRICKYG--DDKLI-AAS------------ 119 (342)
T ss_dssp EESSSEEEEEEE--TTSCEEEECSSSSSSEEECBSCCC--------CSCEEEEEEET--TTEEE-EEE------------
T ss_pred CCCCCcEEEEEc--CCCeEEEEEeccCCceEeccccCC--------CCceEEEEeCC--CCEEE-EEc------------
Confidence 33454 44444 5789999999 8888766654211 11223455565 33332 222
Q ss_pred CcceEEEEEcCCC---c----eEEccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCC-cc--eeeeCCC
Q 036467 172 YECEARVYSLASD---K----WKKINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNR-EE--FKEIHRP 241 (369)
Q Consensus 172 ~~~~~~vys~~t~---~----W~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~-e~--~~~i~~P 241 (369)
....+.+++..+. . .+.+ ...... ..-..+.+++.-...+..+ ..|..+|+.+ .. ......+
T Consensus 120 ~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~-~~v~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~ 191 (342)
T 1yfq_A 120 WDGLIEVIDPRNYGDGVIAVKNLNS-NNTKVK-NKIFTMDTNSSRLIVGMNN------SQVQWFRLPLCEDDNGTIEESG 191 (342)
T ss_dssp TTSEEEEECHHHHTTBCEEEEESCS-SSSSSC-CCEEEEEECSSEEEEEEST------TEEEEEESSCCTTCCCEEEECS
T ss_pred CCCeEEEEcccccccccccccCCee-eEEeeC-CceEEEEecCCcEEEEeCC------CeEEEEECCccccccceeeecC
Confidence 2346777776540 0 1112 111100 0001133333332333332 1889999987 33 3333322
Q ss_pred CCcCCCCCceeEEEEE--CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccC
Q 036467 242 EYKDSHDKCQIEVGVF--RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSN 319 (369)
Q Consensus 242 ~~~~~~~~~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (369)
... ....+... +|++.++... ...+.+|.++..+..........+........+.........+.+ ..
T Consensus 192 ~~~-----~i~~i~~~~~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----s~ 261 (342)
T 1yfq_A 192 LKY-----QIRDVALLPKEQEGYACSSI-DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEF----SP 261 (342)
T ss_dssp CSS-----CEEEEEECSGGGCEEEEEET-TSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEE----CT
T ss_pred CCC-----ceeEEEECCCCCCEEEEEec-CCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEE----cC
Confidence 221 12233333 4666555554 568999999864211112222333221110000000001233344 44
Q ss_pred CCCCCeEEEEECCCeEEEEECCCCeEE
Q 036467 320 GNGKNFLLIEKGDGELILYDFENEIAT 346 (369)
Q Consensus 320 ~~~~~~i~~~~~~~~~~~ydl~~~~~~ 346 (369)
+ +..|+....++.+.+||+++++..
T Consensus 262 ~--~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 262 R--HKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp T--TCCEEEEETTSCEEEEETTTTEEE
T ss_pred C--CCEEEEecCCceEEEEcCccHhHh
Confidence 4 244555555667999999988753
No 94
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=70.96 E-value=81 Score=30.81 Aligned_cols=99 Identities=17% Similarity=0.269 Sum_probs=53.6
Q ss_pred EEEEEECCCcceeee-CCCCCcCCCCCceeEEEEE-C--CcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEccccccc
Q 036467 224 LVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVF-R--GEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALIN 299 (369)
Q Consensus 224 ~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~-~--G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~ 299 (369)
.|..+|+.++++..+ .+.... .....+.-. + |.+.+.+.. ...+.+|-++. ..|.....+.....
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~----~~V~~l~~s~~~~~~~l~s~s~-Dg~I~vwd~~~----~~~~~~~~~~~h~~-- 100 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHE----GPVWRVDWAHPKFGTILASCSY-DGKVLIWKEEN----GRWSQIAVHAVHSA-- 100 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCS----SCEEEEEECCTTSCSEEEEEET-TSCEEEEEEET----TEEEEEEEECCCSS--
T ss_pred cEEEEecCCCCCccceeccCCc----CceEEEEecCCCCCCEEEEEeC-CCeEEEEECCC----CcccccccccCCCC--
Confidence 788888876665554 222221 112223322 2 666555554 45899999885 34666655543221
Q ss_pred ccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCCe
Q 036467 300 FDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENEI 344 (369)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~~ 344 (369)
....+.+ ..++.+..++....++.+..||++++.
T Consensus 101 -------~V~~v~~----sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 101 -------SVNSVQW----APHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp -------CEEEEEE----CCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred -------CeEEEEE----CCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 1233333 221012456666667779999998873
No 95
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=70.86 E-value=52 Score=28.52 Aligned_cols=64 Identities=9% Similarity=0.031 Sum_probs=34.8
Q ss_pred cEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEE
Q 036467 99 LLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARV 178 (369)
Q Consensus 99 Ll~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~v 178 (369)
+++... .++.+.+||..+++....-..+. ....+.+.+...+-+.+.... ....+.+
T Consensus 114 ~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~-----------~~~~v~~ 170 (408)
T 4a11_B 114 MFTSSS--FDKTLKVWDTNTLQTADVFNFEE----------TVYSHHMSPVSTKHCLVAVGT-----------RGPKVQL 170 (408)
T ss_dssp CEEEEE--TTSEEEEEETTTTEEEEEEECSS----------CEEEEEECSSCSSCCEEEEEE-----------SSSSEEE
T ss_pred EEEEEe--CCCeEEEeeCCCCccceeccCCC----------ceeeeEeecCCCCCcEEEEEc-----------CCCeEEE
Confidence 444444 57889999998877655432211 122334444433333344333 2456888
Q ss_pred EEcCCCc
Q 036467 179 YSLASDK 185 (369)
Q Consensus 179 ys~~t~~ 185 (369)
|+..++.
T Consensus 171 ~d~~~~~ 177 (408)
T 4a11_B 171 CDLKSGS 177 (408)
T ss_dssp EESSSSC
T ss_pred EeCCCcc
Confidence 8887653
No 96
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=70.48 E-value=33 Score=33.34 Aligned_cols=122 Identities=16% Similarity=0.185 Sum_probs=62.8
Q ss_pred CcEEECceEEEEeecCCCCCceeEEEEEECCCc--ceeee-CCCCCcC---CCCCceeEEEEECCcEEEEEecCCCeEEE
Q 036467 201 AAVCFNECLIWKASRGLGRGMTVLVVAFDMNRE--EFKEI-HRPEYKD---SHDKCQIEVGVFRGEFAMFHMWREDRVEI 274 (369)
Q Consensus 201 ~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e--~~~~i-~~P~~~~---~~~~~~~~l~~~~G~L~~~~~~~~~~~~i 274 (369)
.++..+|.+|.....+ .|.++|..+. .|+.- ..+.... .+......++..+|+|++... ... |
T Consensus 72 ~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~--dg~--l 140 (677)
T 1kb0_A 72 TPVVVDGIMYVSASWS-------VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW--DGR--L 140 (677)
T ss_dssp CCEEETTEEEEECGGG-------CEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT--TSE--E
T ss_pred CCEEECCEEEEECCCC-------eEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC--CCE--E
Confidence 4588999999987654 7999998864 56543 2221100 000011234456777766532 223 4
Q ss_pred EEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC------CCeEEEEECCCCeEEEe
Q 036467 275 WTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG------DGELILYDFENEIATDF 348 (369)
Q Consensus 275 W~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~ydl~~~~~~~v 348 (369)
..++-...+..|+......... .......|+.. + +.|++... ++.+..||.+|++..+-
T Consensus 141 ~alD~~tG~~~W~~~~~~~~~~------~~~~~~~p~v~------~---~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 141 IALDAATGKEVWHQNTFEGQKG------SLTITGAPRVF------K---GKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp EEEETTTCCEEEEEETTTTCCS------SCBCCSCCEEE------T---TEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EEEECCCCCEEeeecCCcCcCc------CcccccCcEEE------C---CEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 4454322345576521100000 01111234433 3 56666442 35699999999986654
No 97
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=70.07 E-value=36 Score=32.99 Aligned_cols=121 Identities=13% Similarity=0.132 Sum_probs=63.0
Q ss_pred CcEEECceEEEEeecCCCCCceeEEEEEECCCc--ceeee-CCCCCcC---CCCCceeEEEEECCcEEEEEecCCCeEEE
Q 036467 201 AAVCFNECLIWKASRGLGRGMTVLVVAFDMNRE--EFKEI-HRPEYKD---SHDKCQIEVGVFRGEFAMFHMWREDRVEI 274 (369)
Q Consensus 201 ~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e--~~~~i-~~P~~~~---~~~~~~~~l~~~~G~L~~~~~~~~~~~~i 274 (369)
.++..+|.+|.....+ .|.++|..+. .|+.- ..+.... .+......++..+|++++... ... |
T Consensus 61 ~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--dg~--l 129 (668)
T 1kv9_A 61 TPLFHDGVIYTSMSWS-------RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL--DGR--L 129 (668)
T ss_dssp CCEEETTEEEEEEGGG-------EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT--TSE--E
T ss_pred CCEEECCEEEEECCCC-------eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC--CCE--E
Confidence 4588999999987665 8999998764 56542 2221100 000011123446677766532 222 4
Q ss_pred EEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC------CCeEEEEECCCCeEEEe
Q 036467 275 WTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG------DGELILYDFENEIATDF 348 (369)
Q Consensus 275 W~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~ydl~~~~~~~v 348 (369)
..++-...+..|+.... .... .......|+.. + +.|++... ++.++.||.+|++..+-
T Consensus 130 ~alD~~tG~~~W~~~~~--~~~~-----~~~~~~~P~v~------~---~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 130 IALDAKTGKAIWSQQTT--DPAK-----PYSITGAPRVV------K---GKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp EEEETTTCCEEEEEECS--CTTS-----SCBCCSCCEEE------T---TEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EEEECCCCCEeeeeccC--CCCC-----cceecCCCEEE------C---CEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 45553223456775321 0000 00111234433 3 56666432 24699999999986554
No 98
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=69.86 E-value=56 Score=28.47 Aligned_cols=96 Identities=5% Similarity=0.045 Sum_probs=50.7
Q ss_pred EEEEEECCCcceeee-CCCCCcCCCCCceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEccccccccc
Q 036467 224 LVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFD 301 (369)
Q Consensus 224 ~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 301 (369)
.|..+|+.+.+.... .... .....+.-. +|++.++.. ....+.+|-++... .+..+....
T Consensus 228 ~i~~~d~~~~~~~~~~~~~~------~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~------~~~~~~~~~----- 289 (425)
T 1r5m_A 228 AIFVYQITEKTPTGKLIGHH------GPISVLEFNDTNKLLLSAS-DDGTLRIWHGGNGN------SQNCFYGHS----- 289 (425)
T ss_dssp CEEEEETTCSSCSEEECCCS------SCEEEEEEETTTTEEEEEE-TTSCEEEECSSSBS------CSEEECCCS-----
T ss_pred eEEEEEcCCCceeeeeccCC------CceEEEEECCCCCEEEEEc-CCCEEEEEECCCCc------cceEecCCC-----
Confidence 788999988644322 2111 112233333 466555544 45589999876421 112222111
Q ss_pred ccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCCeEEEe
Q 036467 302 NYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENEIATDF 348 (369)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~~~~~v 348 (369)
.....+.+ ..+ +.++....++.+..||+++++....
T Consensus 290 ----~~i~~~~~----~~~---~~l~~~~~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 290 ----QSIVSASW----VGD---DKVISCSMDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp ----SCEEEEEE----ETT---TEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ----ccEEEEEE----CCC---CEEEEEeCCCcEEEEECCCCcEeEe
Confidence 11233444 445 4555555667799999988875443
No 99
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=69.30 E-value=49 Score=34.39 Aligned_cols=187 Identities=13% Similarity=0.099 Sum_probs=84.3
Q ss_pred CCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCce
Q 036467 107 CNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKW 186 (369)
Q Consensus 107 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W 186 (369)
.++.+.+||..+++...+..... ... .+.+.+ + -+++.... ...+.+++..++.-
T Consensus 1023 ~dg~i~vwd~~~~~~~~~~~~~~--------~v~--~~~~~~--~-~~l~~~~~------------dg~v~vwd~~~~~~ 1077 (1249)
T 3sfz_A 1023 EDSVIQVWNWQTGDYVFLQAHQE--------TVK--DFRLLQ--D-SRLLSWSF------------DGTVKVWNVITGRI 1077 (1249)
T ss_dssp SSSBEEEEETTTTEEECCBCCSS--------CEE--EEEECS--S-SEEEEEES------------SSEEEEEETTTTCC
T ss_pred CCCEEEEEECCCCceEEEecCCC--------cEE--EEEEcC--C-CcEEEEEC------------CCcEEEEECCCCce
Confidence 46778899988888775442221 122 233333 1 23333322 34678888877643
Q ss_pred EEccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE-CCcEEEEE
Q 036467 187 KKINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF-RGEFAMFH 265 (369)
Q Consensus 187 ~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~G~L~~~~ 265 (369)
...-......+ ..-...-+|.....+..+. .|..+|+.+.+-.. .+.. +......+.-. +|++.+..
T Consensus 1078 ~~~~~~~~~~v-~~~~~s~d~~~l~s~s~d~------~v~iwd~~~~~~~~-~l~~----h~~~v~~~~~s~dg~~lat~ 1145 (1249)
T 3sfz_A 1078 ERDFTCHQGTV-LSCAISSDATKFSSTSADK------TAKIWSFDLLSPLH-ELKG----HNGCVRCSAFSLDGILLATG 1145 (1249)
T ss_dssp CEEEECCSSCC-CCEEECSSSSSCEEECCSS------CCCEECSSSSSCSB-CCCC----CSSCEEEEEECSSSSEEEEE
T ss_pred eEEEcccCCcE-EEEEECCCCCEEEEEcCCC------cEEEEECCCcceee-eecc----CCCcEEEEEECCCCCEEEEE
Confidence 21101100000 0000222454444443332 56778877654211 1111 11112233333 46665555
Q ss_pred ecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCCeE
Q 036467 266 MWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENEIA 345 (369)
Q Consensus 266 ~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~~~ 345 (369)
. ....+.+|-++..... . .+.................-+.+ ..+ |..++..+ +.+..||+++++.
T Consensus 1146 ~-~dg~i~vwd~~~~~~~--~----~~~~~~~~~~~~~~~~~v~~l~f----s~d---g~~l~s~~-g~v~vwd~~~g~~ 1210 (1249)
T 3sfz_A 1146 D-DNGEIRIWNVSDGQLL--H----SCAPISVEEGTATHGGWVTDVCF----SPD---SKTLVSAG-GYLKWWNVATGDS 1210 (1249)
T ss_dssp E-TTSCCCEEESSSSCCC--C----CCCCCC-------CCSCCCEEEE----CTT---SSCEEEES-SSEEEBCSSSCBC
T ss_pred e-CCCEEEEEECCCCceE--E----EeccccccccccccCceEEEEEE----CCC---CCEEEECC-CeEEEEECCCCce
Confidence 4 3457999988752211 1 11000000000001112333455 555 55556555 4599999998764
No 100
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=69.19 E-value=59 Score=28.50 Aligned_cols=145 Identities=12% Similarity=0.139 Sum_probs=72.0
Q ss_pred cceEEEEEcCCCceEEcc--CCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeeeC-CCCCcCCC
Q 036467 173 ECEARVYSLASDKWKKIN--GGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIH-RPEYKDSH 247 (369)
Q Consensus 173 ~~~~~vys~~t~~W~~~~--~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~ 247 (369)
...+.+++..++.....- ......+ ..+.+ +|.....+..+. .|..+|+.+.+....- .....
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~~~~~~v---~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~--- 220 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPDVHPDTI---YSVDWSRDGALICTSCRDK------RVRVIEPRKGTVVAEKDRPHEG--- 220 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTTTCCSCE---EEEEECTTSSCEEEEETTS------EEEEEETTTTEEEEEEECSSCS---
T ss_pred CCEEEEEECCCCCccEEEecCCCCCce---EEEEECCCCCEEEEEecCC------cEEEEeCCCCceeeeeccCCCC---
Confidence 356888998887554330 0011000 11222 566555554442 8999999886543321 11111
Q ss_pred CCceeEEEEE-CCcEEEEEe--cCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCC
Q 036467 248 DKCQIEVGVF-RGEFAMFHM--WREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKN 324 (369)
Q Consensus 248 ~~~~~~l~~~-~G~L~~~~~--~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (369)
.....+.-. +|++.++.. .....+.+|-+..... =.....++... ....+.+ ..+ +.
T Consensus 221 -~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~----------~v~~~~~----s~~--~~ 280 (402)
T 2aq5_A 221 -TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE---PLSLQELDTSS----------GVLLPFF----DPD--TN 280 (402)
T ss_dssp -SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS---CSEEEECCCCS----------SCEEEEE----ETT--TT
T ss_pred -CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC---CceEEeccCCC----------ceeEEEE----cCC--CC
Confidence 011222222 467666553 3456899998875221 11122222111 1222333 434 25
Q ss_pred eEEEEEC-CCeEEEEECCCCe--EEEeE
Q 036467 325 FLLIEKG-DGELILYDFENEI--ATDFK 349 (369)
Q Consensus 325 ~i~~~~~-~~~~~~ydl~~~~--~~~v~ 349 (369)
.+++... ++.+.+||+++++ ++.+.
T Consensus 281 ~l~~~g~~dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 281 IVYLCGKGDSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp EEEEEETTCSCEEEEEECSSTTCEEEEE
T ss_pred EEEEEEcCCCeEEEEEecCCCcceEeec
Confidence 5555553 5669999999887 65554
No 101
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=68.67 E-value=32 Score=33.45 Aligned_cols=122 Identities=14% Similarity=0.168 Sum_probs=63.3
Q ss_pred CcEEECceEEEEeecCCCCCceeEEEEEECCCc--ceeee-CCCCCcC---CCCCceeEEEEECCcEEEEEecCCCeEEE
Q 036467 201 AAVCFNECLIWKASRGLGRGMTVLVVAFDMNRE--EFKEI-HRPEYKD---SHDKCQIEVGVFRGEFAMFHMWREDRVEI 274 (369)
Q Consensus 201 ~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e--~~~~i-~~P~~~~---~~~~~~~~l~~~~G~L~~~~~~~~~~~~i 274 (369)
.++..+|.+|.....+ .|.++|..+. .|+.- ..+.... .+......++..+|+|++... ... |
T Consensus 65 ~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~--dg~--l 133 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPFS-------VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL--DGR--L 133 (689)
T ss_dssp CCEEETTEEEEECGGG-------CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--TSE--E
T ss_pred cCEEECCEEEEEcCCC-------eEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc--CCE--E
Confidence 4488999999987654 7999998764 56542 2221100 000111223456777766542 223 4
Q ss_pred EEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC------CCeEEEEECCCCeEEEe
Q 036467 275 WTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG------DGELILYDFENEIATDF 348 (369)
Q Consensus 275 W~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~ydl~~~~~~~v 348 (369)
..++....+..|......+... .......|+.. + +.|++... ++.++.||.+|++..+-
T Consensus 134 ~AlDa~TG~~~W~~~~~~~~~~------~~~~~~sP~v~------~---g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 134 EAIDAKTGQRAWSVDTRADHKR------SYTITGAPRVV------N---GKVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp EEEETTTCCEEEEEECCSCTTS------CCBCCSCCEEE------T---TEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EEEECCCCCEeeeecCcCCCCC------CccccCCcEEE------C---CEEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 4444322345576543211110 00111234433 3 56666432 34699999999986543
No 102
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=68.66 E-value=51 Score=27.56 Aligned_cols=69 Identities=13% Similarity=0.134 Sum_probs=34.6
Q ss_pred CcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEE-ECCCeEEE
Q 036467 259 GEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIE-KGDGELIL 337 (369)
Q Consensus 259 G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~ 337 (369)
|++.+... ....+.||-++. ....|.....+.-..- ...-+.+ ..+...+..+.. ..++.+..
T Consensus 170 ~~~l~sgs-~D~~v~lwd~~~--~~~~~~~~~~l~~H~~---------~V~~v~~----sp~~~~~~~las~s~D~~v~i 233 (297)
T 2pm7_B 170 SRKFVTGG-ADNLVKIWKYNS--DAQTYVLESTLEGHSD---------WVRDVAW----SPTVLLRSYMASVSQDRTCII 233 (297)
T ss_dssp CCEEEEEE-TTSCEEEEEEET--TTTEEEEEEEECCCSS---------CEEEEEE----CCCCSSSEEEEEEETTSCEEE
T ss_pred cceEEEEc-CCCcEEEEEEcC--CCceEEEEEEecCCCC---------ceEEEEE----CCCCCCceEEEEEECCCcEEE
Confidence 34444444 456899999875 2344666555542211 1233333 332000244443 34556888
Q ss_pred EECCCC
Q 036467 338 YDFENE 343 (369)
Q Consensus 338 ydl~~~ 343 (369)
||+++.
T Consensus 234 Wd~~~~ 239 (297)
T 2pm7_B 234 WTQDNE 239 (297)
T ss_dssp EEESST
T ss_pred EEeCCC
Confidence 888764
No 103
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=66.88 E-value=50 Score=26.82 Aligned_cols=188 Identities=9% Similarity=0.047 Sum_probs=93.0
Q ss_pred eecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcc
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYEC 174 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (369)
..+|-+.+.. ....++++|+.++....++.... ....++.+|+.. ++..... ...
T Consensus 75 ~~~g~l~v~~--~~~~i~~~d~~~~~~~~~~~~~~---------~~p~~i~~~~~g---~l~v~~~-----------~~~ 129 (270)
T 1rwi_B 75 DGAGTVYVTD--FNNRVVTLAAGSNNQTVLPFDGL---------NYPEGLAVDTQG---AVYVADR-----------GNN 129 (270)
T ss_dssp CTTCCEEEEE--TTTEEEEECTTCSCCEECCCCSC---------SSEEEEEECTTC---CEEEEEG-----------GGT
T ss_pred CCCCCEEEEc--CCCEEEEEeCCCceEeeeecCCc---------CCCcceEECCCC---CEEEEEC-----------CCC
Confidence 3456666665 35689999998877666643321 123356667632 2322221 134
Q ss_pred eEEEEEcCCCceEEccCCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCcee
Q 036467 175 EARVYSLASDKWKKINGGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQI 252 (369)
Q Consensus 175 ~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~ 252 (369)
.+.+++.++...... ... ......++.+ +|.+|+...... .|..||..+.......... . ..-.
T Consensus 130 ~i~~~~~~~~~~~~~-~~~--~~~~p~~i~~~~~g~l~v~~~~~~------~i~~~~~~~~~~~~~~~~~-~----~~p~ 195 (270)
T 1rwi_B 130 RVVKLAAGSKTQTVL-PFT--GLNDPDGVAVDNSGNVYVTDTDNN------RVVKLEAESNNQVVLPFTD-I----TAPW 195 (270)
T ss_dssp EEEEECTTCCSCEEC-CCC--SCCSCCCEEECTTCCEEEEEGGGT------EEEEECTTTCCEEECCCSS-C----CSEE
T ss_pred EEEEEECCCceeEee-ccc--cCCCceeEEEeCCCCEEEEECCCC------EEEEEecCCCceEeecccC-C----CCce
Confidence 566665555443322 111 1111123333 588877765432 8999999887654432211 1 1122
Q ss_pred EEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC
Q 036467 253 EVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG 331 (369)
Q Consensus 253 ~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 331 (369)
.++.. +|.|++.... ...+.+|..+ +. .... +.... ...|.+++. ..+ |.+++...
T Consensus 196 ~i~~d~~g~l~v~~~~-~~~v~~~~~~--~~-~~~~----~~~~~----------~~~p~~i~~--~~~---g~l~v~~~ 252 (270)
T 1rwi_B 196 GIAVDEAGTVYVTEHN-TNQVVKLLAG--ST-TSTV----LPFTG----------LNTPLAVAV--DSD---RTVYVADR 252 (270)
T ss_dssp EEEECTTCCEEEEETT-TSCEEEECTT--CS-CCEE----CCCCS----------CSCEEEEEE--CTT---CCEEEEEG
T ss_pred EEEECCCCCEEEEECC-CCcEEEEcCC--CC-ccee----eccCC----------CCCceeEEE--CCC---CCEEEEEC
Confidence 34444 3677776543 3344444332 11 1111 11111 123333311 444 56777654
Q ss_pred -CCeEEEEECCCCe
Q 036467 332 -DGELILYDFENEI 344 (369)
Q Consensus 332 -~~~~~~ydl~~~~ 344 (369)
++.+..|++..++
T Consensus 253 ~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 253 GNDRVVKLTSLEHH 266 (270)
T ss_dssp GGTEEEEECCCGGG
T ss_pred CCCEEEEEcCCCcc
Confidence 4568888887664
No 104
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=66.53 E-value=93 Score=29.76 Aligned_cols=229 Identities=10% Similarity=-0.005 Sum_probs=109.0
Q ss_pred CCEEEeeccceeeeccccccccccccccccccccCCCCceEE-EeeecccEEEeeccCCceEEEEcCCccce-e-eCCCC
Q 036467 51 DPKLILKNEFKLFGVEIINDKKLIRARKLQVPFALSLEKVEI-SGSCNGLLCISDQSCNEDIFLFNPSTKKY-K-KLPVP 127 (369)
Q Consensus 51 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~s~~GLl~~~~~~~~~~~~V~NP~T~~~-~-~LP~~ 127 (369)
.|.|++.....+..++ ++... .+...+.........+ ....+|.|+..+. ....+...++-.... . .+..
T Consensus 9 ~~~~~~~~~~~I~~i~---~~~~~--~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~-~~~~I~r~~~~g~~~~~~v~~~- 81 (619)
T 3s94_A 9 APLLLYANRRDLRLVD---ATNGK--ENATIVVGGLEDAAAVDFVFSHGLIYWSDV-SEEAIKRTEFNKTESVQNVVVS- 81 (619)
T ss_dssp -CCEEEECSSBEEEEC---CC-----------CBCCSCEEEEEEETTTTEEEEEET-TTTEEEEEEC-----CEEEECS-
T ss_pred CceEEEeccccEEEEe---CCCCc--ceEEEEEcCCCceEEEEEEeCCCEEEEEEC-CCCeEEEEEccCCCceEEEEeC-
Confidence 4788888766666555 32211 0111112111111222 3445788877764 456778888765421 1 1221
Q ss_pred CCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCceEEccCCCCeeeccCCcEEE--
Q 036467 128 EFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKWKKINGGIPYHISSRAAVCF-- 205 (369)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~-- 205 (369)
. .....++.+|...+ ++.+... ....+++++.....=+.+ .. .......++.+
T Consensus 82 ~---------~~~P~GlAvD~~~~--~ly~~d~-----------~~~~I~v~~~dG~~~~~l-~~--~~l~~P~~Iavdp 136 (619)
T 3s94_A 82 G---------LLSPDGLACDWLGE--KLYWTDS-----------ETNRIEVSNLDGSLRKVL-FW--QELDQPRAIALDP 136 (619)
T ss_dssp S---------CSCEEEEEEETTTT--EEEEEET-----------TTTEEEEEETTSCSCEEE-EC--SSCSCCCCEEEET
T ss_pred C---------CCCcCeEEEEecCC--EEEEEeC-----------CCCEEEEEECCCCCEEEE-Ee--CCCCCCceEEEec
Confidence 1 12344777887543 3333322 346788888865432333 11 11112233444
Q ss_pred -CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE--CCcEEEEEecCCCeEEEEEeccCCC
Q 036467 206 -NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF--RGEFAMFHMWREDRVEIWTMKDFGA 282 (369)
Q Consensus 206 -~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~ 282 (369)
+|.|||...... ..|..++++...-..+--. .. ..-..|+.. +|+||++... .-.||+.+-.+.
T Consensus 137 ~~g~ly~tD~g~~-----~~I~r~~~dG~~~~~l~~~-~~----~~P~Glald~~~~~LY~aD~~---~~~I~~~~~dG~ 203 (619)
T 3s94_A 137 SSGFMYWTDWGEV-----PKIERAGMDGSSRFIIINS-EI----YWPNGLTLDYEEQKLYWADAK---LNFIHKSNLDGT 203 (619)
T ss_dssp TTTEEEEEECSSS-----CEEEEEETTSCSCEEEECS-SC----SSEEEEEEETTTTEEEEEETT---TCCEEEESSSCC
T ss_pred CCCeEEEeccCCC-----CEEEEEECCCCceEEEEeC-CC----CCCcEEEEEccCCEEEEEeCC---CCeEEEecCCCC
Confidence 689999985432 2899999887654444111 11 011234444 6899998654 234777775432
Q ss_pred CCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECC-CeEEEEECCCCeE
Q 036467 283 RESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGD-GELILYDFENEIA 345 (369)
Q Consensus 283 ~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ydl~~~~~ 345 (369)
...... ... ...|.++ .-. ++.||+.... ..+...|..+++-
T Consensus 204 -~~~~~~----~~~----------~~~P~gi----~~~--~~~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 204 -NRQAVV----KGS----------LPHPFAL----TLF--EDILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp -EEC-----------------------CCCE----EES--SSEEEEECTTTCSEEEEESSSCCC
T ss_pred -ccEEEE----eCC----------CCCceEE----EEe--CCEEEEecCCCCEEEEEECCCCcc
Confidence 111111 001 1344444 212 2567665533 3589999887754
No 105
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=66.42 E-value=15 Score=26.36 Aligned_cols=43 Identities=12% Similarity=0.303 Sum_probs=31.1
Q ss_pred ceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEe
Q 036467 109 EDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIY 160 (369)
Q Consensus 109 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~ 160 (369)
..+++++|.|++|... .... ....+.+..|...+.|+|+...-
T Consensus 11 A~V~~~d~~~~~W~p~--~~~~-------g~s~V~~~~d~~~~~yrIv~~~l 53 (112)
T 1evh_A 11 AAVMVYDDANKKWVPA--GGST-------GFSRVHIYHHTGNNTFRVVGRKI 53 (112)
T ss_dssp EEEEEEETTTTEEEEG--GGCC-------SCEEEEEEEETTTTEEEEEEEET
T ss_pred EEEEEEcCCCCceEEC--CCCC-------CceEEEEEEECCCCEEEEEEEEC
Confidence 5789999999977543 3211 23556788898888999998753
No 106
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=66.00 E-value=71 Score=28.26 Aligned_cols=141 Identities=13% Similarity=0.081 Sum_probs=72.5
Q ss_pred cccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceE
Q 036467 97 NGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEA 176 (369)
Q Consensus 97 ~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 176 (369)
.++|++.. ...+...++.+++...+-.. .....++.+|+..+ ++.+... ....+
T Consensus 87 ~~~l~~~~---~~~I~~i~~~~~~~~~~~~~----------~~~~~gl~~d~~~~--~ly~~D~-----------~~~~I 140 (386)
T 3v65_B 87 EPVLLFAN---RIDIRQVLPHRSEYTLLLNN----------LENAIALDFHHRRE--LVFWSDV-----------TLDRI 140 (386)
T ss_dssp CCEEEEEC---BSCEEEECTTSCCCEEEECS----------CSCEEEEEEETTTT--EEEEEET-----------TTTEE
T ss_pred cceeEeec---CccceeeccCCCcEEEEecC----------CCccEEEEEecCCC--eEEEEeC-----------CCCcE
Confidence 45555554 35666667666554433221 12345788886543 3333322 23466
Q ss_pred EEEEcCCCceEEccCCCCeeeccCCc--EE-ECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeE
Q 036467 177 RVYSLASDKWKKINGGIPYHISSRAA--VC-FNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIE 253 (369)
Q Consensus 177 ~vys~~t~~W~~~~~~~p~~~~~~~~--v~-~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~ 253 (369)
..++..+...+.+ .... .....+ +. .+|.|||...... .|..+|++...-..+. .... ..-..
T Consensus 141 ~r~~~~g~~~~~~-~~~~--~~~p~glavd~~~g~lY~~d~~~~------~I~~~~~dg~~~~~l~-~~~l----~~P~g 206 (386)
T 3v65_B 141 LRANLNGSNVEEV-VSTG--LESPGGLAVDWVHDKLYWTDSGTS------RIEVANLDGAHRKVLL-WQSL----EKPRA 206 (386)
T ss_dssp EEEETTSCCEEEE-ECSS--CSCCCCEEEETTTTEEEEEETTTT------EEEECBTTSCSCEEEE-CSSC----SCEEE
T ss_pred EEEecCCCCcEEE-EeCC--CCCccEEEEEeCCCeEEEEcCCCC------eEEEEeCCCCceEEee-cCCC----CCCcE
Confidence 7777776655544 1111 111123 33 3699999986542 8889998865443331 1111 11224
Q ss_pred EEEE--CCcEEEEEecCCCeEEEEEecc
Q 036467 254 VGVF--RGEFAMFHMWREDRVEIWTMKD 279 (369)
Q Consensus 254 l~~~--~G~L~~~~~~~~~~~~iW~l~~ 279 (369)
+++. +|.|++..... .-.|++.+-
T Consensus 207 iavdp~~g~ly~td~~~--~~~I~r~~~ 232 (386)
T 3v65_B 207 IALHPMEGTIYWTDWGN--TPRIEASSM 232 (386)
T ss_dssp EEEETTTTEEEEEECSS--SCEEEEEET
T ss_pred EEEEcCCCeEEEeccCC--CCEEEEEeC
Confidence 4554 57777765432 134566553
No 107
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=65.77 E-value=74 Score=28.34 Aligned_cols=187 Identities=10% Similarity=0.104 Sum_probs=92.1
Q ss_pred ceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCceEE
Q 036467 109 EDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKWKK 188 (369)
Q Consensus 109 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W~~ 188 (369)
.++.++|..++....|..... ....+.+.|. +. +++.... +.....+.+++..++..+.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~----------~v~~~~~Spd-g~-~la~~s~---------~~~~~~i~~~d~~tg~~~~ 217 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQ----------PLMSPAWSPD-GS-KLAYVTF---------ESGRSALVIQTLANGAVRQ 217 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESS----------CEEEEEECTT-SS-EEEEEEC---------TTSSCEEEEEETTTCCEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCC----------cceeeEEcCC-CC-EEEEEEe---------cCCCcEEEEEECCCCcEEE
Confidence 689999987665554432211 1223444443 22 2333222 1234678999999887776
Q ss_pred ccCCCCeeeccCCcEEECce-EEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE-CCcEEEEEe
Q 036467 189 INGGIPYHISSRAAVCFNEC-LIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF-RGEFAMFHM 266 (369)
Q Consensus 189 ~~~~~p~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~G~L~~~~~ 266 (369)
+ ...+... ......-+|. +.+....+.. ..|..+|+.+.+...+.-... ....+.-. +|+..++..
T Consensus 218 l-~~~~~~~-~~~~~spdg~~la~~~~~~g~----~~i~~~d~~~~~~~~l~~~~~------~~~~~~~spdg~~l~~~s 285 (415)
T 2hqs_A 218 V-ASFPRHN-GAPAFSPDGSKLAFALSKTGS----LNLYVMDLASGQIRQVTDGRS------NNTEPTWFPDSQNLAFTS 285 (415)
T ss_dssp E-ECCSSCE-EEEEECTTSSEEEEEECTTSS----CEEEEEETTTCCEEECCCCSS------CEEEEEECTTSSEEEEEE
T ss_pred e-ecCCCcc-cCEEEcCCCCEEEEEEecCCC----ceEEEEECCCCCEEeCcCCCC------cccceEECCCCCEEEEEE
Confidence 6 3222110 0000122565 5545443221 378999999887655421111 11122222 576544444
Q ss_pred cCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECC---CeEEEEECCCC
Q 036467 267 WREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGD---GELILYDFENE 343 (369)
Q Consensus 267 ~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~ydl~~~ 343 (369)
.......||.++-.+. + ...+.... .......+ ..+ |..|++...+ ..+..+|++++
T Consensus 286 ~~~g~~~i~~~d~~~~-~----~~~l~~~~---------~~~~~~~~----spd--G~~l~~~~~~~g~~~i~~~d~~~~ 345 (415)
T 2hqs_A 286 DQAGRPQVYKVNINGG-A----PQRITWEG---------SQNQDADV----SSD--GKFMVMVSSNGGQQHIAKQDLATG 345 (415)
T ss_dssp CTTSSCEEEEEETTSS-C----CEECCCSS---------SEEEEEEE----CTT--SSEEEEEEECSSCEEEEEEETTTC
T ss_pred CCCCCcEEEEEECCCC-C----EEEEecCC---------CcccCeEE----CCC--CCEEEEEECcCCceEEEEEECCCC
Confidence 3334567777764322 1 11111110 01222344 444 3556555432 35999999998
Q ss_pred eEEEe
Q 036467 344 IATDF 348 (369)
Q Consensus 344 ~~~~v 348 (369)
+.+.+
T Consensus 346 ~~~~l 350 (415)
T 2hqs_A 346 GVQVL 350 (415)
T ss_dssp CEEEC
T ss_pred CEEEe
Confidence 88655
No 108
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=65.70 E-value=56 Score=26.98 Aligned_cols=94 Identities=15% Similarity=0.199 Sum_probs=51.9
Q ss_pred EEEEEECCCcceee-eCCCCCcCCCCCceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEccccccccc
Q 036467 224 LVVAFDMNREEFKE-IHRPEYKDSHDKCQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFD 301 (369)
Q Consensus 224 ~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 301 (369)
.|..+|+.+.+... +..... ....+.-. +|+ ++.......+.+|-++.. ..+..+.....
T Consensus 206 ~i~i~d~~~~~~~~~~~~~~~------~i~~~~~~~~~~--l~~~~~dg~v~iwd~~~~------~~~~~~~~~~~---- 267 (313)
T 3odt_A 206 LIKLVDMHTGDVLRTYEGHES------FVYCIKLLPNGD--IVSCGEDRTVRIWSKENG------SLKQVITLPAI---- 267 (313)
T ss_dssp EEEEEETTTCCEEEEEECCSS------CEEEEEECTTSC--EEEEETTSEEEEECTTTC------CEEEEEECSSS----
T ss_pred eEEEEECCchhhhhhhhcCCc------eEEEEEEecCCC--EEEEecCCEEEEEECCCC------ceeEEEeccCc----
Confidence 89999998765432 221111 12233333 354 333334668999987641 23333332211
Q ss_pred ccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCCeEEE
Q 036467 302 NYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENEIATD 347 (369)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~~~~~ 347 (369)
...-+.+ ..+ +.++....++.+..||++++++..
T Consensus 268 -----~i~~~~~----~~~---~~~~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 268 -----SIWSVDC----MSN---GDIIVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp -----CEEEEEE----CTT---SCEEEEETTSCEEEEESCGGGCCC
T ss_pred -----eEEEEEE----ccC---CCEEEEeCCCcEEEEeCCCCceee
Confidence 1333444 555 566666667779999999987644
No 109
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=65.65 E-value=89 Score=29.58 Aligned_cols=127 Identities=12% Similarity=0.147 Sum_probs=63.5
Q ss_pred CCcEEECceEEEEeecCCCCCceeEEEEEECCCc--ceeee-CCCCCcCC-CCCceeEEEEECCcEEEEEecCCCeEEEE
Q 036467 200 RAAVCFNECLIWKASRGLGRGMTVLVVAFDMNRE--EFKEI-HRPEYKDS-HDKCQIEVGVFRGEFAMFHMWREDRVEIW 275 (369)
Q Consensus 200 ~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e--~~~~i-~~P~~~~~-~~~~~~~l~~~~G~L~~~~~~~~~~~~iW 275 (369)
..++..+|.+|.....+ .|.++|..+. .|+.- ..|..... +......++..+|+|++... .. .|.
T Consensus 62 ~~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~--dg--~l~ 130 (582)
T 1flg_A 62 SQAIVSDGVIYVTASYS-------RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL--DA--SVV 130 (582)
T ss_dssp CCCEEETTEEEEEETTT-------EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET--TT--EEE
T ss_pred eccEEECCEEEEEcCCC-------CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC--CC--EEE
Confidence 34588999999987644 6999999764 56653 33321100 00001223456777766543 12 245
Q ss_pred EeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCC-eEEEEEC------CCeEEEEECCCCeEEEe
Q 036467 276 TMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKN-FLLIEKG------DGELILYDFENEIATDF 348 (369)
Q Consensus 276 ~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~------~~~~~~ydl~~~~~~~v 348 (369)
.++-...+..|.... ..... .......|+.. .+...|. .|++-.. ++.++.||.+|++..+.
T Consensus 131 AlD~~TG~~~W~~~~--~~~~~-----~~~~~~sP~v~----~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 131 ALNKNTGKVVWKKKF--ADHGA-----GYTMTGAPTIV----KDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWM 199 (582)
T ss_dssp EEESSSCCEEEEEEC--SCGGG-----TCBCCSCCEEE----ECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEE
T ss_pred EEECCCCCEEeeecC--CCCCc-----CcccccCCEEe----CCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEee
Confidence 555332345576532 11000 00111344443 2200012 3433221 34699999999987664
No 110
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=65.05 E-value=69 Score=27.74 Aligned_cols=28 Identities=18% Similarity=0.171 Sum_probs=18.1
Q ss_pred eecccEEEeeccCCceEEEEcCCccceee
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKK 123 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~ 123 (369)
+.+|-.++... .++.+.+||..+++...
T Consensus 148 spdg~~l~sgs-~dg~v~iwd~~~~~~~~ 175 (357)
T 4g56_B 148 FSDGTQAVSGG-KDFSVKVWDLSQKAVLK 175 (357)
T ss_dssp CSSSSEEEEEE-TTSCEEEEETTTTEEEE
T ss_pred CCCCCEEEEEe-CCCeEEEEECCCCcEEE
Confidence 44565444332 56789999998877654
No 111
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=64.41 E-value=72 Score=27.78 Aligned_cols=70 Identities=20% Similarity=0.311 Sum_probs=38.4
Q ss_pred CcEEEEEecC-------CCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC
Q 036467 259 GEFAMFHMWR-------EDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG 331 (369)
Q Consensus 259 G~L~~~~~~~-------~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 331 (369)
+++++..... .....||+.+- .+...+.+++... . .-+.+ ..+ |..++ ...
T Consensus 266 ~~lyv~~~~~~~~~~~~~~~~~v~viD~----~t~~~v~~i~~~~-p----------~~ia~----spd--g~~l~-v~n 323 (361)
T 2oiz_A 266 GRMYVFMHPDGKEGTHKFPAAEIWVMDT----KTKQRVARIPGRD-A----------LSMTI----DQQ--RNLML-TLD 323 (361)
T ss_dssp TEEEEEEESSCCTTCTTCCCSEEEEEET----TTTEEEEEEECTT-C----------CEEEE----ETT--TTEEE-EEC
T ss_pred CeEEEEEccCCCcccccCCCceEEEEEC----CCCcEEEEEecCC-e----------eEEEE----CCC--CCEEE-EeC
Confidence 5777665411 12345676663 2345666665422 1 22344 445 34444 444
Q ss_pred CCeEEEEECCCCeEEEeEE
Q 036467 332 DGELILYDFENEIATDFKI 350 (369)
Q Consensus 332 ~~~~~~ydl~~~~~~~v~~ 350 (369)
.+.+..||+++++++.+..
T Consensus 324 ~~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 324 GGNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp SSCEEEEECSSSSCEEEEE
T ss_pred CCeEEEEECCCCcceeeEE
Confidence 4669999999995555543
No 112
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=63.97 E-value=1.1e+02 Score=29.91 Aligned_cols=143 Identities=10% Similarity=0.076 Sum_probs=74.2
Q ss_pred ceEEEEEcCCCceEEccCCCC---e-eeccC--CcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcC
Q 036467 174 CEARVYSLASDKWKKINGGIP---Y-HISSR--AAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKD 245 (369)
Q Consensus 174 ~~~~vys~~t~~W~~~~~~~p---~-~~~~~--~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~ 245 (369)
..+..|+..++.++.. ...+ . .+... .+++. +|.+.|++..+. .|..||..++++..+.......
T Consensus 377 ~Gl~~~~~~~~~~~~~-~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~------Gl~~~d~~~~~~~~~~~~~~~l 449 (795)
T 4a2l_A 377 GGLNLYNPITQRFTSY-TLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAG------GLSILHRNSGQVENFNQRNSQL 449 (795)
T ss_dssp SCEEEECTTTCCEEEE-CCC------CCSCSCEEEEEEETTTTEEEEEETTT------EEEEEETTTCCEEEECTTTSCC
T ss_pred CCeEEEcCCCCcEEEE-ecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcC------ceeEEeCCCCcEEEeecCCCCc
Confidence 3567777777877766 2111 0 11111 12332 677677776642 7999999999988875321110
Q ss_pred CCCCceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcc-cccccccccccceeeeeEEeeeccCCCCC
Q 036467 246 SHDKCQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGR-RALINFDNYAFVHLKPVCEMMNLSNGNGK 323 (369)
Q Consensus 246 ~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (369)
.......+.+. +|.|.+... . . ++.++. .+..|........ ..+ .......+.. ..+
T Consensus 450 -~~~~v~~i~~d~~g~lwigt~-~--G--l~~~~~--~~~~~~~~~~~~~~~~~------~~~~i~~i~~----d~~--- 508 (795)
T 4a2l_A 450 -VNENVYAILPDGEGNLWLGTL-S--A--LVRFNP--EQRSFTTIEKEKDGTPV------VSKQITTLFR----DSH--- 508 (795)
T ss_dssp -SCSCEEEEEECSSSCEEEEES-S--C--EEEEET--TTTEEEECCBCTTCCBC------CCCCEEEEEE----CTT---
T ss_pred -CCCeeEEEEECCCCCEEEEec-C--c--eeEEeC--CCCeEEEcccccccccc------CCceEEEEEE----CCC---
Confidence 11123344554 478777654 2 3 444443 1234543221100 011 0111222333 334
Q ss_pred CeEEEEECCCeEEEEECCCCeE
Q 036467 324 NFLLIEKGDGELILYDFENEIA 345 (369)
Q Consensus 324 ~~i~~~~~~~~~~~ydl~~~~~ 345 (369)
|.|++... ..++.||++++++
T Consensus 509 g~lWigt~-~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 509 KRLWIGGE-EGLSVFKQEGLDI 529 (795)
T ss_dssp CCEEEEES-SCEEEEEEETTEE
T ss_pred CCEEEEeC-CceEEEeCCCCeE
Confidence 78888776 4599999988877
No 113
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=63.78 E-value=67 Score=27.15 Aligned_cols=115 Identities=8% Similarity=0.024 Sum_probs=58.7
Q ss_pred ECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE-CCcEEEEEecC-CCeEEEEEeccCCC
Q 036467 205 FNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF-RGEFAMFHMWR-EDRVEIWTMKDFGA 282 (369)
Q Consensus 205 ~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~G~L~~~~~~~-~~~~~iW~l~~~~~ 282 (369)
-+|.+||...... .|..+|+.+.++..+..+... .-..+... +|+|++..... ...-.|++++..+
T Consensus 54 ~~g~l~~~~~~~~------~i~~~d~~~~~~~~~~~~~~~-----~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~- 121 (333)
T 2dg1_A 54 RQGQLFLLDVFEG------NIFKINPETKEIKRPFVSHKA-----NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG- 121 (333)
T ss_dssp TTSCEEEEETTTC------EEEEECTTTCCEEEEEECSSS-----SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS-
T ss_pred CCCCEEEEECCCC------EEEEEeCCCCcEEEEeeCCCC-----CcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC-
Confidence 3688888765542 799999998887765322111 12234444 57887776432 0112455555322
Q ss_pred CCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECC-------CeEEEEECCCCeEEEe
Q 036467 283 RESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGD-------GELILYDFENEIATDF 348 (369)
Q Consensus 283 ~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~ydl~~~~~~~v 348 (369)
..-... +..... .....-+.+ ..+ |.+++.... ..++.+|+++++.+.+
T Consensus 122 -~~~~~~--~~~~~~-------~~~~~~i~~----d~~---g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 122 -DNLQDI--IEDLST-------AYCIDDMVF----DSK---GGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp -CSCEEE--ECSSSS-------CCCEEEEEE----CTT---SCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred -CEEEEE--EccCcc-------CCcccceEE----CCC---CCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 111111 111000 011222333 444 677776542 3588888887766554
No 114
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=63.59 E-value=97 Score=28.94 Aligned_cols=119 Identities=8% Similarity=0.075 Sum_probs=63.5
Q ss_pred CceEEEEeecCCCCCceeEEEEEECCCcceee-eCCCCCcCCCCCceeEEEEEC-CcEEEEEecCCCeEEEEEeccCC-C
Q 036467 206 NECLIWKASRGLGRGMTVLVVAFDMNREEFKE-IHRPEYKDSHDKCQIEVGVFR-GEFAMFHMWREDRVEIWTMKDFG-A 282 (369)
Q Consensus 206 ~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~l~~~~-G~L~~~~~~~~~~~~iW~l~~~~-~ 282 (369)
+|...+.+.... ..|..+|+.+.+... ++..... +......+.--+ |.+++.......++.+|-++..+ .
T Consensus 334 dg~~l~va~~~~-----~~v~v~D~~tg~l~~~i~~g~~p--h~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~ 406 (543)
T 1nir_A 334 SHRYFMTAANNS-----NKVAVIDSKDRRLSALVDVGKTP--HPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHP 406 (543)
T ss_dssp TSCEEEEEEGGG-----TEEEEEETTTTEEEEEEECSSSB--CCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCT
T ss_pred CCCEEEEEecCC-----CeEEEEECCCCeEEEeeccCCCC--CCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCc
Confidence 576444443322 278889999886544 2321111 111223332223 66655544345689999987532 1
Q ss_pred CCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC-------CCeEEEEECCCCeEE
Q 036467 283 RESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG-------DGELILYDFENEIAT 346 (369)
Q Consensus 283 ~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~ydl~~~~~~ 346 (369)
...|..+.++....- ....+.+ ..+ |..|+.... +..+.+||.++.+..
T Consensus 407 ~~~~~~v~~l~~~g~---------~~~~v~~----~pd--g~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 407 QYAWKKVAELQGQGG---------GSLFIKT----HPK--SSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp TTBTSEEEEEECSCS---------CCCCEEC----CTT--CCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred hhcCeEEEEEEcCCC---------CceEEEc----CCC--CCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 234999988875331 0112333 444 345554331 235999999887743
No 115
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=63.49 E-value=87 Score=28.37 Aligned_cols=70 Identities=14% Similarity=0.111 Sum_probs=43.6
Q ss_pred CCcEEEEEecC------CCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCC-eEEEEE
Q 036467 258 RGEFAMFHMWR------EDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKN-FLLIEK 330 (369)
Q Consensus 258 ~G~L~~~~~~~------~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~ 330 (369)
+++||+..... ...=+||++|- .++..+.+|+.... ..-+.+ ..+ |. .+|...
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~----~T~kvv~~I~vg~~----------P~gia~----spD--g~~~lyv~n 389 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNA----ETGERINKIELGHE----------IDSINV----SQD--AEPLLYALS 389 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEET----TTCCEEEEEEEEEE----------ECEEEE----CCS--SSCEEEEEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEEC----CCCeEEEEEECCCC----------cCeEEE----ccC--CCEEEEEEc
Confidence 36788876421 12457999985 56788888875331 122344 555 34 455555
Q ss_pred -CCCeEEEEECCCCeEEE
Q 036467 331 -GDGELILYDFENEIATD 347 (369)
Q Consensus 331 -~~~~~~~ydl~~~~~~~ 347 (369)
.++.+.++|+++.+..+
T Consensus 390 ~~s~~VsVID~~t~kvv~ 407 (426)
T 3c75_H 390 AGTQTLHIYDAATGEELR 407 (426)
T ss_dssp TTTTEEEEEETTTCCEEE
T ss_pred CCCCeEEEEECCCCCEEE
Confidence 35679999999998643
No 116
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=62.51 E-value=78 Score=27.52 Aligned_cols=141 Identities=12% Similarity=0.086 Sum_probs=71.4
Q ss_pred cccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceE
Q 036467 97 NGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEA 176 (369)
Q Consensus 97 ~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 176 (369)
.+.|++.. ...+...++.+.....+-.. .....++.+|+..+ ++.+... ....+
T Consensus 44 ~~~ll~~~---~~~I~~i~~~g~~~~~~~~~----------~~~~~~l~~d~~~~--~ly~~D~-----------~~~~I 97 (349)
T 3v64_C 44 EPVLLFAN---RIDIRQVLPHRSEYTLLLNN----------LENAIALDFHHRRE--LVFWSDV-----------TLDRI 97 (349)
T ss_dssp CCEEEEEC---BSCEEEECTTSCCEEEEECS----------CSCEEEEEEETTTT--EEEEEET-----------TTTEE
T ss_pred CceeEeec---ccceEEEeCCCCeeEEeecC----------CCceEEEEEecccc--EEEEEec-----------cCCce
Confidence 45555554 34566666665544433211 11345778886543 3333322 23456
Q ss_pred EEEEcCCCceEEccCCCCeeeccCCcEE---ECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeE
Q 036467 177 RVYSLASDKWKKINGGIPYHISSRAAVC---FNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIE 253 (369)
Q Consensus 177 ~vys~~t~~W~~~~~~~p~~~~~~~~v~---~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~ 253 (369)
..++..+..-+.+ ... ......++. .+|.+||...... .|..+|++...-..+. .... ..-..
T Consensus 98 ~r~~~~g~~~~~~-~~~--~~~~p~glavd~~~g~ly~~d~~~~------~I~~~~~dG~~~~~l~-~~~l----~~P~~ 163 (349)
T 3v64_C 98 LRANLNGSNVEEV-VST--GLESPGGLAVDWVHDKLYWTDSGTS------RIEVANLDGAHRKVLL-WQSL----EKPRA 163 (349)
T ss_dssp EEEETTSCSCEEE-ECS--SCSCCCEEEEETTTTEEEEEETTTT------EEEEEETTSCSCEEEE-CTTC----SCEEE
T ss_pred EEEecCCCCceEE-EeC--CCCCccEEEEecCCCeEEEEcCCCC------eEEEEcCCCCceEEEE-eCCC----CCcce
Confidence 6677766544443 111 111112332 3689999986542 8999999876544332 1111 11234
Q ss_pred EEEE--CCcEEEEEecCCCeEEEEEecc
Q 036467 254 VGVF--RGEFAMFHMWREDRVEIWTMKD 279 (369)
Q Consensus 254 l~~~--~G~L~~~~~~~~~~~~iW~l~~ 279 (369)
+++. +|.|++..... .-.|++.+-
T Consensus 164 iavdp~~g~ly~td~~~--~~~I~r~~~ 189 (349)
T 3v64_C 164 IALHPMEGTIYWTDWGN--TPRIEASSM 189 (349)
T ss_dssp EEEETTTTEEEEEECSS--SCEEEEEET
T ss_pred EEEecCcCeEEEeccCC--CCEEEEEeC
Confidence 4554 57777776432 134555543
No 117
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=61.80 E-value=70 Score=26.71 Aligned_cols=191 Identities=9% Similarity=0.080 Sum_probs=92.5
Q ss_pred eeccc-EEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCc
Q 036467 95 SCNGL-LCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYE 173 (369)
Q Consensus 95 s~~GL-l~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (369)
+.+|- ++... ..+.+.+||..+++.......... ......+.+.+. +.+ +.... ..
T Consensus 106 ~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~-------~~~i~~~~~~~~-~~~--l~~~~-----------~d 162 (337)
T 1gxr_A 106 LPDGCTLIVGG--EASTLSIWDLAAPTPRIKAELTSS-------APACYALAISPD-SKV--CFSCC-----------SD 162 (337)
T ss_dssp CTTSSEEEEEE--SSSEEEEEECCCC--EEEEEEECS-------SSCEEEEEECTT-SSE--EEEEE-----------TT
T ss_pred cCCCCEEEEEc--CCCcEEEEECCCCCcceeeecccC-------CCceEEEEECCC-CCE--EEEEe-----------CC
Confidence 33453 43333 567899999988763322211111 112234445442 222 22222 13
Q ss_pred ceEEEEEcCCCceEEccCCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCc
Q 036467 174 CEARVYSLASDKWKKINGGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKC 250 (369)
Q Consensus 174 ~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~ 250 (369)
..+.+|+..++.....-....... ..+.+ +|.....+..+. .|..+|+.+.+-... ..+..
T Consensus 163 g~v~~~d~~~~~~~~~~~~~~~~i---~~~~~~~~~~~l~~~~~dg------~i~~~d~~~~~~~~~~~~~~~------- 226 (337)
T 1gxr_A 163 GNIAVWDLHNQTLVRQFQGHTDGA---SCIDISNDGTKLWTGGLDN------TVRSWDLREGRQLQQHDFTSQ------- 226 (337)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCE---EEEEECTTSSEEEEEETTS------EEEEEETTTTEEEEEEECSSC-------
T ss_pred CcEEEEeCCCCceeeeeecccCce---EEEEECCCCCEEEEEecCC------cEEEEECCCCceEeeecCCCc-------
Confidence 468888888765432201111000 11222 565555554442 789999987654332 32211
Q ss_pred eeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEE
Q 036467 251 QIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIE 329 (369)
Q Consensus 251 ~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 329 (369)
...+.-. +|+..++... ...+.+|-++.. + . ..+.... .....+.+ ..+ +..++..
T Consensus 227 v~~~~~s~~~~~l~~~~~-~~~i~~~~~~~~---~---~-~~~~~~~---------~~v~~~~~----~~~--~~~l~~~ 283 (337)
T 1gxr_A 227 IFSLGYCPTGEWLAVGME-SSNVEVLHVNKP---D---K-YQLHLHE---------SCVLSLKF----AYC--GKWFVST 283 (337)
T ss_dssp EEEEEECTTSSEEEEEET-TSCEEEEETTSS---C---E-EEECCCS---------SCEEEEEE----CTT--SSEEEEE
T ss_pred eEEEEECCCCCEEEEEcC-CCcEEEEECCCC---C---e-EEEcCCc---------cceeEEEE----CCC--CCEEEEe
Confidence 1222322 4666555553 458899988752 1 1 1211111 11333444 444 2445555
Q ss_pred ECCCeEEEEECCCCeEEE
Q 036467 330 KGDGELILYDFENEIATD 347 (369)
Q Consensus 330 ~~~~~~~~ydl~~~~~~~ 347 (369)
..++.+..||+++++...
T Consensus 284 ~~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 284 GKDNLLNAWRTPYGASIF 301 (337)
T ss_dssp ETTSEEEEEETTTCCEEE
T ss_pred cCCCcEEEEECCCCeEEE
Confidence 566779999999987653
No 118
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=61.80 E-value=88 Score=27.90 Aligned_cols=30 Identities=10% Similarity=0.072 Sum_probs=20.0
Q ss_pred EEeeecccEEEeeccCCceEEEEcCCccceee
Q 036467 92 ISGSCNGLLCISDQSCNEDIFLFNPSTKKYKK 123 (369)
Q Consensus 92 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~ 123 (369)
.+...+++|+... .++.+.+||..+++...
T Consensus 127 ~~~~~~~~l~sgs--~dg~i~vwd~~~~~~~~ 156 (464)
T 3v7d_B 127 CLQFEDNYVITGA--DDKMIRVYDSINKKFLL 156 (464)
T ss_dssp EEEEETTEEEEEE--TTSCEEEEETTTTEEEE
T ss_pred EEEECCCEEEEEc--CCCcEEEEECCCCcEEE
Confidence 3444555555544 67899999988876543
No 119
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=61.53 E-value=72 Score=26.76 Aligned_cols=23 Identities=9% Similarity=0.176 Sum_probs=13.9
Q ss_pred cccEEEeeccCCceEEEEcCCccc
Q 036467 97 NGLLCISDQSCNEDIFLFNPSTKK 120 (369)
Q Consensus 97 ~GLl~~~~~~~~~~~~V~NP~T~~ 120 (369)
+|-++++.. .++.+.|||..+.+
T Consensus 50 ~~~~l~S~s-~D~~i~vWd~~~~~ 72 (340)
T 4aow_A 50 FPDMILSAS-RDKTIIMWKLTRDE 72 (340)
T ss_dssp CTTEEEEEE-TTSCEEEEEECCSS
T ss_pred CCCEEEEEc-CCCeEEEEECCCCC
Confidence 353433332 56789999877654
No 120
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=61.19 E-value=90 Score=27.76 Aligned_cols=185 Identities=9% Similarity=0.030 Sum_probs=91.9
Q ss_pred ceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCceEE
Q 036467 109 EDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKWKK 188 (369)
Q Consensus 109 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W~~ 188 (369)
..++++|..|++...+...+. ....+.+.|. +.+ ++.... ......+.+++..++..+.
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~----------~~~~~~~spd-g~~-la~~~~---------~~g~~~i~~~d~~~~~~~~ 261 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR----------HNGAPAFSPD-GSK-LAFALS---------KTGSLNLYVMDLASGQIRQ 261 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS----------CEEEEEECTT-SSE-EEEEEC---------TTSSCEEEEEETTTCCEEE
T ss_pred cEEEEEECCCCcEEEeecCCC----------cccCEEEcCC-CCE-EEEEEe---------cCCCceEEEEECCCCCEEe
Confidence 589999999988876643321 1223445543 233 332222 1234568888998887776
Q ss_pred ccCCCCeeeccCCcEE--ECce-EEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE-CCcEEEE
Q 036467 189 INGGIPYHISSRAAVC--FNEC-LIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF-RGEFAMF 264 (369)
Q Consensus 189 ~~~~~p~~~~~~~~v~--~~G~-lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~G~L~~~ 264 (369)
+ ...+... ..+. -+|. +++....+. ...|..+|+.+.+...+..... ....+.-. +|+..++
T Consensus 262 l-~~~~~~~---~~~~~spdg~~l~~~s~~~g----~~~i~~~d~~~~~~~~l~~~~~------~~~~~~~spdG~~l~~ 327 (415)
T 2hqs_A 262 V-TDGRSNN---TEPTWFPDSQNLAFTSDQAG----RPQVYKVNINGGAPQRITWEGS------QNQDADVSSDGKFMVM 327 (415)
T ss_dssp C-CCCSSCE---EEEEECTTSSEEEEEECTTS----SCEEEEEETTSSCCEECCCSSS------EEEEEEECTTSSEEEE
T ss_pred C-cCCCCcc---cceEECCCCCEEEEEECCCC----CcEEEEEECCCCCEEEEecCCC------cccCeEECCCCCEEEE
Confidence 6 3222110 1122 2565 444443221 1378889998876544422211 11222222 4765544
Q ss_pred EecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCC---eEEEEECC
Q 036467 265 HMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDG---ELILYDFE 341 (369)
Q Consensus 265 ~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~ydl~ 341 (369)
.........|++++-.+ .... .+.... ......+ ..+ |..|++...+. .++.+|++
T Consensus 328 ~~~~~g~~~i~~~d~~~--~~~~---~l~~~~----------~~~~~~~----spd--g~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 328 VSSNGGQQHIAKQDLAT--GGVQ---VLSSTF----------LDETPSL----APN--GTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp EEECSSCEEEEEEETTT--CCEE---ECCCSS----------SCEEEEE----CTT--SSEEEEEEEETTEEEEEEEETT
T ss_pred EECcCCceEEEEEECCC--CCEE---EecCCC----------CcCCeEE----cCC--CCEEEEEEcCCCccEEEEEECC
Confidence 44332234454444311 1121 111111 1233444 445 35566654333 59999999
Q ss_pred CCeEEEeE
Q 036467 342 NEIATDFK 349 (369)
Q Consensus 342 ~~~~~~v~ 349 (369)
++..+.+.
T Consensus 387 g~~~~~l~ 394 (415)
T 2hqs_A 387 GRFKARLP 394 (415)
T ss_dssp SCCEEECC
T ss_pred CCcEEEee
Confidence 88887763
No 121
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=61.09 E-value=83 Score=27.36 Aligned_cols=97 Identities=9% Similarity=0.040 Sum_probs=49.1
Q ss_pred EEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE--CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEccccccccc
Q 036467 224 LVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF--RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFD 301 (369)
Q Consensus 224 ~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 301 (369)
.|..+|+.+..-....+... +......+.-. +|.+.+.... ...+.+|-++. ...+..+....-
T Consensus 241 ~i~~~d~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~~l~s~~~-dg~v~~wd~~~------~~~~~~~~~~~~---- 306 (416)
T 2pm9_A 241 SILIWDLRNANTPLQTLNQG---HQKGILSLDWCHQDEHLLLSSGR-DNTVLLWNPES------AEQLSQFPARGN---- 306 (416)
T ss_dssp CCCEEETTSTTSCSBCCCSC---CSSCEEEEEECSSCSSCEEEEES-SSEEEEECSSS------CCEEEEEECSSS----
T ss_pred eEEEEeCCCCCCCcEEeecC---ccCceeEEEeCCCCCCeEEEEeC-CCCEEEeeCCC------CccceeecCCCC----
Confidence 57788888753211122100 11112233332 5666665554 45899998764 234444432211
Q ss_pred ccccceeeeeEEeeeccCCCCCCeEEEEE-CCCeEEEEECCCCeE
Q 036467 302 NYAFVHLKPVCEMMNLSNGNGKNFLLIEK-GDGELILYDFENEIA 345 (369)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~ydl~~~~~ 345 (369)
...-+.+ ..+ +..+++.. .++.+..||+++.+.
T Consensus 307 -----~v~~~~~----s~~--~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 307 -----WCFKTKF----APE--APDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp -----CCCCEEE----CTT--CTTEEEECCSSSEEEEEESCCCCC
T ss_pred -----ceEEEEE----CCC--CCCEEEEEecCCcEEEEEccCCCC
Confidence 1233445 444 22555544 456799999987763
No 122
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=60.67 E-value=92 Score=27.70 Aligned_cols=111 Identities=14% Similarity=0.196 Sum_probs=59.8
Q ss_pred EEECceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCceeEEEEECCcEEEEEecCCCeEEEEEeccCC
Q 036467 203 VCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVFRGEFAMFHMWREDRVEIWTMKDFG 281 (369)
Q Consensus 203 v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~ 281 (369)
+..+|.....+..+. .|..+|+.+.+.... .... ....-...+|.+.+... ....+.+|-++.
T Consensus 285 ~~~~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~~~~-------~~v~~~~~~~~~l~~~~-~dg~i~vwd~~~-- 348 (445)
T 2ovr_B 285 LQFDGIHVVSGSLDT------SIRVWDVETGNCIHTLTGHQ-------SLTSGMELKDNILVSGN-ADSTVKIWDIKT-- 348 (445)
T ss_dssp EEECSSEEEEEETTS------CEEEEETTTCCEEEEECCCC-------SCEEEEEEETTEEEEEE-TTSCEEEEETTT--
T ss_pred EEECCCEEEEEeCCC------eEEEEECCCCCEEEEEcCCc-------ccEEEEEEeCCEEEEEe-CCCeEEEEECCC--
Confidence 555777666665543 788999987654332 2111 12222334566555544 355899998864
Q ss_pred CCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCCeEEE
Q 036467 282 ARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENEIATD 347 (369)
Q Consensus 282 ~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~~~~~ 347 (369)
...+..+..... . ...+.++ .-+ ++.++....++.+..||+++++...
T Consensus 349 ----~~~~~~~~~~~~------~--~~~v~~~----~~~--~~~l~s~~~dg~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 349 ----GQCLQTLQGPNK------H--QSAVTCL----QFN--KNFVITSSDDGTVKLWDLKTGEFIR 396 (445)
T ss_dssp ----CCEEEEECSTTS------C--SSCEEEE----EEC--SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred ----CcEEEEEccCCC------C--CCCEEEE----EEC--CCEEEEEeCCCeEEEEECCCCceee
Confidence 123344432111 0 0122233 113 2455555667779999999887543
No 123
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=59.28 E-value=81 Score=26.64 Aligned_cols=145 Identities=13% Similarity=0.022 Sum_probs=71.7
Q ss_pred cceEEEEEcCCCceEEc-c-CCCCeeeccCCcEEECce-EEEEeecCCCCCceeEEEEEECCCcce-eeeCCCCCcCC--
Q 036467 173 ECEARVYSLASDKWKKI-N-GGIPYHISSRAAVCFNEC-LIWKASRGLGRGMTVLVVAFDMNREEF-KEIHRPEYKDS-- 246 (369)
Q Consensus 173 ~~~~~vys~~t~~W~~~-~-~~~p~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~-- 246 (369)
...+.+++..++.-... . ...+.. -.+.-+|. +|+..... ..|..+|+.+.+. ..++.+.....
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~~~~----~~~s~dg~~l~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~ 137 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLKPFG----ATINNTTQTLWFGNTVN------SAVTAIDAKTGEVKGRLVLDDRKRTEE 137 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCS----EEEETTTTEEEEEETTT------TEEEEEETTTCCEEEEEESCCCCCCSS
T ss_pred CccEEEEcCCCCeEEEEEecCCCcce----EEECCCCCEEEEEecCC------CEEEEEeCCCCeeEEEEecCCCccccc
Confidence 34566777666543221 0 111111 11444666 55554433 2899999988765 44555432210
Q ss_pred CCCcee-EEEEE-CCc-EEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCC
Q 036467 247 HDKCQI-EVGVF-RGE-FAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGK 323 (369)
Q Consensus 247 ~~~~~~-~l~~~-~G~-L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (369)
.....+ .+... +|+ |++........+.+|-++ ....+..++.... ....+.+ ..+ |
T Consensus 138 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~------~~~~~~~~~~~~~---------~~~~~~~----s~d--g 196 (353)
T 3vgz_A 138 VRPLQPRELVADDATNTVYISGIGKESVIWVVDGG------NIKLKTAIQNTGK---------MSTGLAL----DSE--G 196 (353)
T ss_dssp CCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETT------TTEEEEEECCCCT---------TCCCCEE----ETT--T
T ss_pred cCCCCCceEEECCCCCEEEEEecCCCceEEEEcCC------CCceEEEecCCCC---------ccceEEE----CCC--C
Confidence 001112 23333 455 555543334455555443 2344455542111 1223444 444 3
Q ss_pred CeEEEEECCCeEEEEECCCCeEEEe
Q 036467 324 NFLLIEKGDGELILYDFENEIATDF 348 (369)
Q Consensus 324 ~~i~~~~~~~~~~~ydl~~~~~~~v 348 (369)
+.+++...++.+..||+++++....
T Consensus 197 ~~l~~~~~~~~i~~~d~~~~~~~~~ 221 (353)
T 3vgz_A 197 KRLYTTNADGELITIDTADNKILSR 221 (353)
T ss_dssp TEEEEECTTSEEEEEETTTTEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCeEEEE
Confidence 5676666666799999999886543
No 124
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=58.80 E-value=1.7e+02 Score=30.25 Aligned_cols=203 Identities=13% Similarity=0.116 Sum_probs=94.1
Q ss_pred eeecccEEEeeccCCceEEEEcCCccceee-CCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCC
Q 036467 94 GSCNGLLCISDQSCNEDIFLFNPSTKKYKK-LPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSY 172 (369)
Q Consensus 94 ~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 172 (369)
-+.+|-.+.... .++.+.|||..|++... +... ......+.+.+. +.+- +... .
T Consensus 623 ~s~~~~~l~s~~-~d~~i~vw~~~~~~~~~~~~~h----------~~~v~~~~~s~~-~~~l--~s~~-----------~ 677 (1249)
T 3sfz_A 623 FSQDGQRIASCG-ADKTLQVFKAETGEKLLDIKAH----------EDEVLCCAFSSD-DSYI--ATCS-----------A 677 (1249)
T ss_dssp ECTTSSEEEEEE-TTSCEEEEETTTCCEEEEECCC----------SSCEEEEEECTT-SSEE--EEEE-----------T
T ss_pred ECCCCCEEEEEe-CCCeEEEEECCCCCEEEEeccC----------CCCEEEEEEecC-CCEE--EEEe-----------C
Confidence 344554433332 57889999999987543 3311 112234444443 2332 2222 2
Q ss_pred cceEEEEEcCCCceEEccCCCCeeeccCCcEEE----CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCC
Q 036467 173 ECEARVYSLASDKWKKINGGIPYHISSRAAVCF----NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHD 248 (369)
Q Consensus 173 ~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~----~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~ 248 (369)
...+.|++..++.-...-....... ..+.+ ++.+...+..+ ..|..+|+.+.+....-.. . .
T Consensus 678 d~~v~vwd~~~~~~~~~~~~~~~~v---~~~~~~~~~~~~~l~sg~~d------~~v~vwd~~~~~~~~~~~~-h----~ 743 (1249)
T 3sfz_A 678 DKKVKIWDSATGKLVHTYDEHSEQV---NCCHFTNKSNHLLLATGSND------FFLKLWDLNQKECRNTMFG-H----T 743 (1249)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCE---EEEEECSSSSCCEEEEEETT------SCEEEEETTSSSEEEEECC-C----S
T ss_pred CCeEEEEECCCCceEEEEcCCCCcE---EEEEEecCCCceEEEEEeCC------CeEEEEECCCcchhheecC-C----C
Confidence 3568899988765432201111000 01222 22233333333 2688899888765332111 1 1
Q ss_pred CceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccc----cccccceeeeeEEeeeccCCCCC
Q 036467 249 KCQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINF----DNYAFVHLKPVCEMMNLSNGNGK 323 (369)
Q Consensus 249 ~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 323 (369)
.....+... +|+..+... ....+.+|-+.... ....+........ ..........+.+ ..+
T Consensus 744 ~~v~~~~~sp~~~~l~s~s-~dg~v~vwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~----s~d--- 809 (1249)
T 3sfz_A 744 NSVNHCRFSPDDELLASCS-ADGTLRLWDVRSAN------ERKSINVKRFFLSSEDPPEDVEVIVKCCSW----SAD--- 809 (1249)
T ss_dssp SCEEEEEECSSTTEEEEEE-SSSEEEEEEGGGTE------EEEEEECCCCC--------CCCCCBCCCCB----CTT---
T ss_pred CCEEEEEEecCCCEEEEEE-CCCeEEEEeCCCCc------ccceecccccccccCCccccccceEEEEEE----CCC---
Confidence 112222222 466555544 35589999887521 2222222111000 0000001222233 444
Q ss_pred CeEEEEECCCeEEEEECCCCeEEEeE
Q 036467 324 NFLLIEKGDGELILYDFENEIATDFK 349 (369)
Q Consensus 324 ~~i~~~~~~~~~~~ydl~~~~~~~v~ 349 (369)
|..++...++.+..||+.++......
T Consensus 810 g~~l~~~~~~~v~~~d~~~~~~~~~~ 835 (1249)
T 3sfz_A 810 GDKIIVAAKNKVLLFDIHTSGLLAEI 835 (1249)
T ss_dssp SSEEEEEETTEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCcEEEEEecCCCceeEE
Confidence 44445444567999999988865543
No 125
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=58.70 E-value=84 Score=26.65 Aligned_cols=108 Identities=6% Similarity=0.089 Sum_probs=55.1
Q ss_pred CceEEEEeecCCCCCceeEEEEEECCCcceee-eCCCCCcCCCCCceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCC
Q 036467 206 NECLIWKASRGLGRGMTVLVVAFDMNREEFKE-IHRPEYKDSHDKCQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGAR 283 (369)
Q Consensus 206 ~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~ 283 (369)
+|.....+..+. .|..+|+.+.+... +..... ....+.-. +|++.+... ....+.||-++..
T Consensus 175 dg~~lasg~~dg------~i~iwd~~~~~~~~~~~~h~~------~v~~l~~spd~~~l~s~s-~dg~i~iwd~~~~--- 238 (321)
T 3ow8_A 175 DGKYLASGAIDG------IINIFDIATGKLLHTLEGHAM------PIRSLTFSPDSQLLVTAS-DDGYIKIYDVQHA--- 238 (321)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEEECCCSS------CCCEEEECTTSCEEEEEC-TTSCEEEEETTTC---
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcEEEEEcccCC------ceeEEEEcCCCCEEEEEc-CCCeEEEEECCCc---
Confidence 455444444432 68889988765432 221111 11122322 466554443 4568999988641
Q ss_pred CCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCCeEEE
Q 036467 284 ESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENEIATD 347 (369)
Q Consensus 284 ~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~~~~~ 347 (369)
.....+.... ....-+.+ ..+ +..++-...++.+..||+++++...
T Consensus 239 ---~~~~~~~~h~---------~~v~~~~~----sp~--~~~l~s~s~D~~v~iwd~~~~~~~~ 284 (321)
T 3ow8_A 239 ---NLAGTLSGHA---------SWVLNVAF----CPD--DTHFVSSSSDKSVKVWDVGTRTCVH 284 (321)
T ss_dssp ---CEEEEECCCS---------SCEEEEEE----CTT--SSEEEEEETTSCEEEEETTTTEEEE
T ss_pred ---ceeEEEcCCC---------CceEEEEE----CCC--CCEEEEEeCCCcEEEEeCCCCEEEE
Confidence 1233332111 11233444 444 2444444556679999999887543
No 126
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=58.01 E-value=73 Score=25.76 Aligned_cols=195 Identities=9% Similarity=0.033 Sum_probs=89.6
Q ss_pred EEeeecccEEE-eeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCC
Q 036467 92 ISGSCNGLLCI-SDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDID 170 (369)
Q Consensus 92 ~~~s~~GLl~~-~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 170 (369)
+..+.+|-+.+ .+. ....+.++|+-++....++...... ..++.+|+.. . + .+..
T Consensus 29 i~~~~~g~l~v~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~---------p~~i~~~~~g-~--l-~v~~---------- 84 (270)
T 1rwi_B 29 VAVDSAGNVYVTSEG-MYGRVVKLATGSTGTTVLPFNGLYQ---------PQGLAVDGAG-T--V-YVTD---------- 84 (270)
T ss_dssp EEECTTCCEEEEECS-SSCEEEEECC-----EECCCCSCCS---------CCCEEECTTC-C--E-EEEE----------
T ss_pred eEECCCCCEEEEccC-CCCcEEEecCCCcccceEeeCCcCC---------cceeEECCCC-C--E-EEEc----------
Confidence 33445666655 432 4578899999887766655332111 1245556532 2 2 2222
Q ss_pred CCcceEEEEEcCCCceEEccCCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCC
Q 036467 171 SYECEARVYSLASDKWKKINGGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHD 248 (369)
Q Consensus 171 ~~~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~ 248 (369)
....+.+|+..++.-... ..... ....++.+ +|.+|+...... .|..+|..+......... .. .
T Consensus 85 -~~~~i~~~d~~~~~~~~~-~~~~~--~~p~~i~~~~~g~l~v~~~~~~------~i~~~~~~~~~~~~~~~~-~~--~- 150 (270)
T 1rwi_B 85 -FNNRVVTLAAGSNNQTVL-PFDGL--NYPEGLAVDTQGAVYVADRGNN------RVVKLAAGSKTQTVLPFT-GL--N- 150 (270)
T ss_dssp -TTTEEEEECTTCSCCEEC-CCCSC--SSEEEEEECTTCCEEEEEGGGT------EEEEECTTCCSCEECCCC-SC--C-
T ss_pred -CCCEEEEEeCCCceEeee-ecCCc--CCCcceEECCCCCEEEEECCCC------EEEEEECCCceeEeeccc-cC--C-
Confidence 023567777766544433 11110 01112322 688877765432 788888766544332211 11 0
Q ss_pred CceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEE
Q 036467 249 KCQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLL 327 (369)
Q Consensus 249 ~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 327 (369)
.-..++.. +|+|++.... ...+.+|-.+. . . .. ...... ...|.+++. ..+ |.++
T Consensus 151 -~p~~i~~~~~g~l~v~~~~-~~~i~~~~~~~--~-~---~~-~~~~~~----------~~~p~~i~~--d~~---g~l~ 206 (270)
T 1rwi_B 151 -DPDGVAVDNSGNVYVTDTD-NNRVVKLEAES--N-N---QV-VLPFTD----------ITAPWGIAV--DEA---GTVY 206 (270)
T ss_dssp -SCCCEEECTTCCEEEEEGG-GTEEEEECTTT--C-C---EE-ECCCSS----------CCSEEEEEE--CTT---CCEE
T ss_pred -CceeEEEeCCCCEEEEECC-CCEEEEEecCC--C-c---eE-eecccC----------CCCceEEEE--CCC---CCEE
Confidence 11123443 5787776543 23444443321 1 1 11 111111 123333311 444 6788
Q ss_pred EEEC-CCeEEEEECCCCeEEEe
Q 036467 328 IEKG-DGELILYDFENEIATDF 348 (369)
Q Consensus 328 ~~~~-~~~~~~ydl~~~~~~~v 348 (369)
+... +..+..||+.++....+
T Consensus 207 v~~~~~~~v~~~~~~~~~~~~~ 228 (270)
T 1rwi_B 207 VTEHNTNQVVKLLAGSTTSTVL 228 (270)
T ss_dssp EEETTTSCEEEECTTCSCCEEC
T ss_pred EEECCCCcEEEEcCCCCcceee
Confidence 8764 34699999988765443
No 127
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=57.79 E-value=88 Score=26.61 Aligned_cols=68 Identities=12% Similarity=0.069 Sum_probs=40.0
Q ss_pred CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEE
Q 036467 258 RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELIL 337 (369)
Q Consensus 258 ~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 337 (369)
+|.+.+... ....+.+|-++.. ..+..+..... ....+.+ ..+ +.++....++.+..
T Consensus 213 ~~~~l~~~~-~d~~i~i~d~~~~------~~~~~~~~~~~---------~v~~~~~----~~~---~~~l~~~~d~~i~i 269 (372)
T 1k8k_C 213 NGSRVAWVS-HDSTVCLADADKK------MAVATLASETL---------PLLAVTF----ITE---SSLVAAGHDCFPVL 269 (372)
T ss_dssp SSSEEEEEE-TTTEEEEEEGGGT------TEEEEEECSSC---------CEEEEEE----EET---TEEEEEETTSSCEE
T ss_pred CCCEEEEEe-CCCEEEEEECCCC------ceeEEEccCCC---------CeEEEEE----ecC---CCEEEEEeCCeEEE
Confidence 465555444 4568999998751 23344432211 1233344 444 66777666667999
Q ss_pred EECCC--CeEEEe
Q 036467 338 YDFEN--EIATDF 348 (369)
Q Consensus 338 ydl~~--~~~~~v 348 (369)
||+.+ ++|..+
T Consensus 270 ~~~~~~~~~~~~~ 282 (372)
T 1k8k_C 270 FTYDSAAGKLSFG 282 (372)
T ss_dssp EEEETTTTEEEEC
T ss_pred EEccCcCceEEEe
Confidence 99998 776554
No 128
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=57.69 E-value=78 Score=25.94 Aligned_cols=198 Identities=11% Similarity=0.099 Sum_probs=95.9
Q ss_pred EEeeecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCC
Q 036467 92 ISGSCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDS 171 (369)
Q Consensus 92 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 171 (369)
+....+|-+.+... ....++++||. ++...++.+.. .....++.+|+.. ++.....
T Consensus 62 i~~~~~g~l~v~~~-~~~~i~~~~~~-g~~~~~~~~~~--------~~~~~~i~~~~~g---~l~v~~~----------- 117 (299)
T 2z2n_A 62 LTISSDGEVWFTEN-AANKIGRITKK-GIIKEYTLPNP--------DSAPYGITEGPNG---DIWFTEM----------- 117 (299)
T ss_dssp EEECTTSCEEEEET-TTTEEEEECTT-SCEEEEECSST--------TCCEEEEEECTTS---CEEEEET-----------
T ss_pred EEECCCCCEEEeCC-CCCeEEEECCC-CcEEEEeCCCc--------CCCceeeEECCCC---CEEEEec-----------
Confidence 33345676655542 35678999986 44443332211 1123355666532 2222111
Q ss_pred CcceEEEEEcCCCceEEccCCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCC
Q 036467 172 YECEARVYSLASDKWKKINGGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDK 249 (369)
Q Consensus 172 ~~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~ 249 (369)
....+.+++. ++..... .. +........+.+ +|.+|+..... ..|..+|+ ++++..+..|... .
T Consensus 118 ~~~~i~~~d~-~g~~~~~-~~-~~~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~~~----~ 183 (299)
T 2z2n_A 118 NGNRIGRITD-DGKIREY-EL-PNKGSYPSFITLGSDNALWFTENQN------NAIGRITE-SGDITEFKIPTPA----S 183 (299)
T ss_dssp TTTEEEEECT-TCCEEEE-EC-SSTTCCEEEEEECTTSCEEEEETTT------TEEEEECT-TCCEEEEECSSTT----C
T ss_pred CCceEEEECC-CCCEEEe-cC-CCCCCCCceEEEcCCCCEEEEeCCC------CEEEEEcC-CCcEEEeeCCCCC----C
Confidence 1345666666 5555443 11 100001112333 57787765433 27999999 7777766555432 1
Q ss_pred ceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEE
Q 036467 250 CQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLI 328 (369)
Q Consensus 250 ~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 328 (369)
....+... +|.|++.... ... |++++. . ..... +..... ...|.+++. ..+ |.+++
T Consensus 184 ~~~~i~~~~~g~l~v~~~~-~~~--i~~~~~-~--g~~~~---~~~~~~---------~~~~~~i~~--~~~---g~l~v 240 (299)
T 2z2n_A 184 GPVGITKGNDDALWFVEII-GNK--IGRITT-S--GEITE---FKIPTP---------NARPHAITA--GAG---IDLWF 240 (299)
T ss_dssp CEEEEEECTTSSEEEEETT-TTE--EEEECT-T--CCEEE---EECSST---------TCCEEEEEE--CST---TCEEE
T ss_pred cceeEEECCCCCEEEEccC-Cce--EEEECC-C--CcEEE---EECCCC---------CCCceeEEE--CCC---CCEEE
Confidence 12234444 4788776542 234 444443 1 22222 211110 123333311 444 67887
Q ss_pred EE-CCCeEEEEECCCCeEEEeEEe
Q 036467 329 EK-GDGELILYDFENEIATDFKIQ 351 (369)
Q Consensus 329 ~~-~~~~~~~ydl~~~~~~~v~~~ 351 (369)
.. ....+..||+ +++++.+.+.
T Consensus 241 ~~~~~~~i~~~d~-~g~~~~~~~~ 263 (299)
T 2z2n_A 241 TEWGANKIGRLTS-NNIIEEYPIQ 263 (299)
T ss_dssp EETTTTEEEEEET-TTEEEEEECS
T ss_pred eccCCceEEEECC-CCceEEEeCC
Confidence 76 3456999999 5666665443
No 129
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=57.33 E-value=50 Score=32.20 Aligned_cols=56 Identities=16% Similarity=0.240 Sum_probs=32.5
Q ss_pred CcEEE---CceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCceeEEEEECCcEEEEEe
Q 036467 201 AAVCF---NECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVFRGEFAMFHM 266 (369)
Q Consensus 201 ~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~~G~L~~~~~ 266 (369)
.++.+ +|.|||..... ..|.++|+....-..+ ..+... .....|...++.|+++..
T Consensus 543 nGlavd~~~~~LY~aD~~~------~~I~~~d~dG~~~~~~~~~~~~~----~~P~glavd~~~lywtd~ 602 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKL------HSISSIDVNGGNRKTILEDEKRL----AHPFSLAVFEDKVFWTDI 602 (699)
T ss_dssp CCEEECTTTCCEEEEETTT------TEEEEECSSSSCCEEECCCSSSC----SSCCCCEEETTEEEEECS
T ss_pred cEEEEeccCCEEEEEecCC------CeEEEEccCCCceEEEEecCCcC----CCceEeEEECCEEEEEeC
Confidence 44555 48999998654 2899999976544433 222211 112234456677777663
No 130
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=57.06 E-value=1.1e+02 Score=27.29 Aligned_cols=24 Identities=4% Similarity=0.032 Sum_probs=14.2
Q ss_pred CeEEEEECCCeEEEEECCCCeEEE
Q 036467 324 NFLLIEKGDGELILYDFENEIATD 347 (369)
Q Consensus 324 ~~i~~~~~~~~~~~ydl~~~~~~~ 347 (369)
|.++....++.+.+||+++++.++
T Consensus 412 g~~lasg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 412 GDTLASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp SSCEEEECSSEEEECCCC------
T ss_pred CCEEEEEcCCcEEEEECCcCeeeC
Confidence 566666666779999999987654
No 131
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=56.51 E-value=1e+02 Score=26.91 Aligned_cols=191 Identities=7% Similarity=0.091 Sum_probs=91.1
Q ss_pred eecc-cEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCc
Q 036467 95 SCNG-LLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYE 173 (369)
Q Consensus 95 s~~G-Ll~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (369)
+.+| +|+... ..+.+.+||..+++....-... ......+.+.+. +.+ +.... ..
T Consensus 106 ~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~h---------~~~v~~~~~~~~-~~~--l~s~s-----------~d 160 (420)
T 3vl1_A 106 KLQMRRFILGT--TEGDIKVLDSNFNLQREIDQAH---------VSEITKLKFFPS-GEA--LISSS-----------QD 160 (420)
T ss_dssp CSSSCEEEEEE--TTSCEEEECTTSCEEEEETTSS---------SSCEEEEEECTT-SSE--EEEEE-----------TT
T ss_pred ecCCCEEEEEE--CCCCEEEEeCCCcceeeecccc---------cCccEEEEECCC-CCE--EEEEe-----------CC
Confidence 3444 444443 5788999999888776643221 112334555553 222 22222 24
Q ss_pred ceEEEEEcCCCce-EEccCCCCeeeccCCcE--EECceEEEEeecCCCCCceeEEEEEECCCcceee-eCCCCCcCCCCC
Q 036467 174 CEARVYSLASDKW-KKINGGIPYHISSRAAV--CFNECLIWKASRGLGRGMTVLVVAFDMNREEFKE-IHRPEYKDSHDK 249 (369)
Q Consensus 174 ~~~~vys~~t~~W-~~~~~~~p~~~~~~~~v--~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~ 249 (369)
..+.+|+..++.= +.+ ......+ ..+ .-+|.....+..+. .|..+|+.+.+-.. +..+.... .
T Consensus 161 ~~i~iwd~~~~~~~~~~-~~h~~~v---~~~~~~~~~~~l~s~~~d~------~v~iwd~~~~~~~~~~~~~~~~~---~ 227 (420)
T 3vl1_A 161 MQLKIWSVKDGSNPRTL-IGHRATV---TDIAIIDRGRNVLSASLDG------TIRLWECGTGTTIHTFNRKENPH---D 227 (420)
T ss_dssp SEEEEEETTTCCCCEEE-ECCSSCE---EEEEEETTTTEEEEEETTS------CEEEEETTTTEEEEEECBTTBTT---C
T ss_pred CeEEEEeCCCCcCceEE-cCCCCcE---EEEEEcCCCCEEEEEcCCC------cEEEeECCCCceeEEeecCCCCC---C
Confidence 5788888876421 122 1100000 011 12455444444432 68888988765433 23222110 0
Q ss_pred ceeEEEE----------------------ECCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccce
Q 036467 250 CQIEVGV----------------------FRGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVH 307 (369)
Q Consensus 250 ~~~~l~~----------------------~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~ 307 (369)
....+.. -+|++.++.. ....+.+|-+... .....+.... ...
T Consensus 228 ~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~------~~~~~~~~~~--------~~~ 292 (420)
T 3vl1_A 228 GVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH-VSGVITVHNVFSK------EQTIQLPSKF--------TCS 292 (420)
T ss_dssp CEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE-TTSCEEEEETTTC------CEEEEECCTT--------SSC
T ss_pred CccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEc-CCCeEEEEECCCC------ceeEEccccc--------CCC
Confidence 1111111 1455555444 3558999988641 1233332111 011
Q ss_pred eeeeEEeeeccCCCCCC-eEEEEECCCeEEEEECCCCe
Q 036467 308 LKPVCEMMNLSNGNGKN-FLLIEKGDGELILYDFENEI 344 (369)
Q Consensus 308 ~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~ydl~~~~ 344 (369)
...+.+ ..+ +. .++....++.+..||+++++
T Consensus 293 v~~~~~----~~~--~~~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 293 CNSLTV----DGN--NANYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp EEEEEE----CSS--CTTEEEEEETTSEEEEEETTCTT
T ss_pred ceeEEE----eCC--CCCEEEEEeCCCeEEEEEcCCCc
Confidence 333444 444 23 44445556779999999864
No 132
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=56.05 E-value=97 Score=26.55 Aligned_cols=60 Identities=7% Similarity=0.122 Sum_probs=34.9
Q ss_pred CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEECCcEEEEEecCCCeEEEEEecc
Q 036467 206 NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVFRGEFAMFHMWREDRVEIWTMKD 279 (369)
Q Consensus 206 ~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~ 279 (369)
+|.|||..... ..|.++|++...-..+- .... ..-..++..++.|++... ... .|+..+.
T Consensus 177 ~~~lY~aD~~~------~~I~~~d~dG~~~~~~~-~~~~----~~P~glav~~~~lywtd~-~~~--~V~~~~~ 236 (318)
T 3sov_A 177 EQKLYWADAKL------NFIHKSNLDGTNRQAVV-KGSL----PHPFALTLFEDILYWTDW-STH--SILACNK 236 (318)
T ss_dssp TTEEEEEETTT------TEEEEEETTSCSCEEEE-CSCC----SCEEEEEEETTEEEEEET-TTT--EEEEEET
T ss_pred CCEEEEEECCC------CEEEEEcCCCCceEEEe-cCCC----CCceEEEEeCCEEEEEec-CCC--eEEEEEC
Confidence 68999998654 28999999864433331 1111 122345667788888743 233 3555543
No 133
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=56.01 E-value=1e+02 Score=26.85 Aligned_cols=103 Identities=12% Similarity=0.089 Sum_probs=50.1
Q ss_pred EEEEEECCCcce--eeeCCCCCcCCCCCceeEEEEECCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEccccccccc
Q 036467 224 LVVAFDMNREEF--KEIHRPEYKDSHDKCQIEVGVFRGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFD 301 (369)
Q Consensus 224 ~il~fD~~~e~~--~~i~~P~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 301 (369)
.|..+|+.+.+- ..+...... ....+...+|++.+.. .....+.+|.+.+..... . +..+.......
T Consensus 314 ~i~vwd~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~l~s~-~~d~~v~iw~~~~~~~~~--~-~~~~~~~~~~~-- 382 (420)
T 3vl1_A 314 MLAQWDLRSPECPVGEFLINEGT-----PINNVYFAAGALFVSS-GFDTSIKLDIISDPESER--P-AIEFETPTFLV-- 382 (420)
T ss_dssp EEEEEETTCTTSCSEEEEESTTS-----CEEEEEEETTEEEEEE-TTTEEEEEEEECCTTCCS--C-EECTTSCEEEC--
T ss_pred eEEEEEcCCCcCchhhhhccCCC-----CceEEEeCCCCEEEEe-cCCccEEEEeccCCCCCc--c-ceeccCccEEc--
Confidence 899999987542 223221111 1223344467654444 445699999998632211 1 11111111100
Q ss_pred ccccceeeeeEEeeeccCC-CCCCeEEEEECCCeEEEEECCC
Q 036467 302 NYAFVHLKPVCEMMNLSNG-NGKNFLLIEKGDGELILYDFEN 342 (369)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~ydl~~ 342 (369)
.......-+.+ ..+ ...|.++....++.+..|+++.
T Consensus 383 -~~~~~v~~~~~----s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 383 -SNDDAVSQFCY----VSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp -CSSCCCCEEEE----ECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred -cCCcceEEEEE----ccCCCCcceEEEEcCCceEEEEeccC
Confidence 01111223333 333 0113587777777799999875
No 134
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=55.68 E-value=92 Score=26.17 Aligned_cols=63 Identities=5% Similarity=-0.154 Sum_probs=34.6
Q ss_pred ECceEEEEeecCCCCCceeEEEEEECCCccee-eeCCCCCcCCCCCceeEEEEE-CCcEEEEEecCCCeEEEEEec
Q 036467 205 FNECLIWKASRGLGRGMTVLVVAFDMNREEFK-EIHRPEYKDSHDKCQIEVGVF-RGEFAMFHMWREDRVEIWTMK 278 (369)
Q Consensus 205 ~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~ 278 (369)
.++.+|..+.... .|..+|+.+.+.. .++.+... ....+... +|+..++.......+.+|-++
T Consensus 9 ~~~~~~v~~~~~~------~v~~~d~~~~~~~~~~~~~~~~-----~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~ 73 (349)
T 1jmx_B 9 AGHEYMIVTNYPN------NLHVVDVASDTVYKSCVMPDKF-----GPGTAMMAPDNRTAYVLNNHYGDIYGIDLD 73 (349)
T ss_dssp TTCEEEEEEETTT------EEEEEETTTTEEEEEEECSSCC-----SSCEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCCEEEEEeCCCC------eEEEEECCCCcEEEEEecCCCC-----CCceeEECCCCCEEEEEeCCCCcEEEEeCC
Confidence 3566666665542 8999999987664 34555411 01123333 466444444444566666654
No 135
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=55.30 E-value=97 Score=26.35 Aligned_cols=182 Identities=11% Similarity=0.023 Sum_probs=85.5
Q ss_pred CceEEEEcCCccceeeC-CCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCC---
Q 036467 108 NEDIFLFNPSTKKYKKL-PVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLAS--- 183 (369)
Q Consensus 108 ~~~~~V~NP~T~~~~~L-P~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t--- 183 (369)
...+.+.++.+++...+ |.. ....++.+|+..+ ++.+... ....+..++..+
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~-----------~~p~g~~~d~~~~--~ly~~D~-----------~~~~I~~~~~~g~~~ 64 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNL-----------RNVVALDTEVASN--RIYWSDL-----------SQRMICSTQLDRAHG 64 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSC-----------SSEEEEEEETTTT--EEEEEET-----------TTTEEEEEEC-----
T ss_pred CCeEEEEECCCcceEehhcCC-----------CceEEEEEEeCCC--EEEEEEC-----------CCCcEEEEECCCCCC
Confidence 35677777777665443 221 1335777776543 3333322 234566666654
Q ss_pred -CceEEccCCCCeeeccCCcEE---ECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE--
Q 036467 184 -DKWKKINGGIPYHISSRAAVC---FNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF-- 257 (369)
Q Consensus 184 -~~W~~~~~~~p~~~~~~~~v~---~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-- 257 (369)
..-..+ .. .......++. .+|.+||...... .|..+|++...-..+- .... ..-..+++.
T Consensus 65 ~~~~~~~-~~--~~~~~p~glavd~~~~~ly~~d~~~~------~I~~~~~~g~~~~~~~-~~~~----~~P~~iavdp~ 130 (316)
T 1ijq_A 65 VSSYDTV-IS--RDIQAPDGLAVDWIHSNIYWTDSVLG------TVSVADTKGVKRKTLF-RENG----SKPRAIVVDPV 130 (316)
T ss_dssp ---CEEE-EC--SSCSCCCEEEEETTTTEEEEEETTTT------EEEEEETTSSSEEEEE-ECTT----CCEEEEEEETT
T ss_pred CcccEEE-Ee--CCCCCcCEEEEeecCCeEEEEECCCC------EEEEEeCCCCceEEEE-ECCC----CCcceEEeCCC
Confidence 111222 10 0111112333 3689999976542 8999999876544331 1111 112244554
Q ss_pred CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECC-CeEE
Q 036467 258 RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGD-GELI 336 (369)
Q Consensus 258 ~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 336 (369)
+|.|++....... .|++++-.+.. .+ .+-...+ ..|.+++. ..+ ++.||+.... ..+.
T Consensus 131 ~g~ly~~d~~~~~--~I~~~~~dG~~---~~--~~~~~~~----------~~P~gla~--d~~--~~~lY~~D~~~~~I~ 189 (316)
T 1ijq_A 131 HGFMYWTDWGTPA--KIKKGGLNGVD---IY--SLVTENI----------QWPNGITL--DLL--SGRLYWVDSKLHSIS 189 (316)
T ss_dssp TTEEEEEECSSSC--EEEEEETTSCC---EE--EEECSSC----------SCEEEEEE--ETT--TTEEEEEETTTTEEE
T ss_pred CCEEEEEccCCCC--eEEEEcCCCCC---eE--EEEECCC----------CCceEEEE--ecc--CCEEEEEECCCCeEE
Confidence 5778877642212 45555432221 11 1111111 23444311 322 3677776543 3577
Q ss_pred EEECCCCeEEEe
Q 036467 337 LYDFENEIATDF 348 (369)
Q Consensus 337 ~ydl~~~~~~~v 348 (369)
.+|+.+...+.+
T Consensus 190 ~~d~dg~~~~~~ 201 (316)
T 1ijq_A 190 SIDVNGGNRKTI 201 (316)
T ss_dssp EEETTSCSCEEE
T ss_pred EEecCCCceEEE
Confidence 788776554444
No 136
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=55.18 E-value=1.1e+02 Score=27.09 Aligned_cols=157 Identities=9% Similarity=-0.029 Sum_probs=79.2
Q ss_pred EEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCceEEccCCCCeeeccCCcEEE---CceEEEEeecCC
Q 036467 141 SLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKWKKINGGIPYHISSRAAVCF---NECLIWKASRGL 217 (369)
Q Consensus 141 ~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~---~G~lyw~~~~~~ 217 (369)
..++.+|...+. +.+... ....+++++.....-+.+... ......++.+ +|.|||......
T Consensus 161 p~glavD~~~~~--lY~~d~-----------~~~~I~~~~~~g~~~~~l~~~---~~~~P~~iavdp~~g~ly~td~~~~ 224 (400)
T 3p5b_L 161 PDGLAVDWIHSN--IYWTDS-----------VLGTVSVADTKGVKRKTLFRE---NGSKPRAIVVDPVHGFMYWTDWGTP 224 (400)
T ss_dssp EEEEEEETTTTE--EEEEET-----------TTTEEEEECTTTCSEEEEEEC---SSCCEEEEEEETTTTEEEEEECSSS
T ss_pred cccEEEEecCCc--eEEEEC-----------CCCeEEEEeCCCCceEEEEeC---CCCCcceEEEecccCeEEEEeCCCC
Confidence 447777765432 333322 234677777776654444110 0111122333 689999875432
Q ss_pred CCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE--CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEccc
Q 036467 218 GRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF--RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRR 295 (369)
Q Consensus 218 ~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~ 295 (369)
..|..+|++...-..+-. ... ..-..|+.. +|+||++... . -.|++.+-.+. ...... ...
T Consensus 225 -----~~I~~~~~dG~~~~~~~~-~~l----~~P~glavd~~~~~lY~aD~~-~--~~I~~~d~dG~-~~~~~~---~~~ 287 (400)
T 3p5b_L 225 -----AKIKKGGLNGVDIYSLVT-ENI----QWPNGITLDLLSGRLYWVDSK-L--HSISSIDVNGG-NRKTIL---EDE 287 (400)
T ss_dssp -----CCEEEEETTSCSCEEEEC-SSC----SCEEEEEEETTTTEEEEEETT-T--TEEEEEETTSC-CCEEEE---ECS
T ss_pred -----CEEEEEeCCCCccEEEEE-CCC----CceEEEEEEeCCCEEEEEECC-C--CEEEEEeCCCC-ccEEEE---eCC
Confidence 278899988754433311 111 112234554 5888888653 2 24666664332 222221 111
Q ss_pred ccccccccccceeeeeEEeeeccCCCCCCeEEEEECC-CeEEEEECCCCeE
Q 036467 296 ALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGD-GELILYDFENEIA 345 (369)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ydl~~~~~ 345 (369)
. ....|.++ .-. ++.||+.... ..|..+|..+++.
T Consensus 288 ~---------~l~~P~gl----~v~--~~~lywtd~~~~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 288 K---------RLAHPFSL----AVF--EDKVFWTDIINEAIFSANRLTGSD 323 (400)
T ss_dssp S---------TTSSEEEE----EEE--TTEEEEEESSSCSEEEEESSSCCC
T ss_pred C---------CCCCCEEE----EEe--CCEEEEecCCCCeEEEEEcCCCCc
Confidence 1 11356665 212 2677776643 4599999666653
No 137
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=55.16 E-value=86 Score=25.67 Aligned_cols=185 Identities=6% Similarity=0.005 Sum_probs=90.8
Q ss_pred eecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcc
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYEC 174 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (369)
..+|-+.+... ....++++||. ++....+.+.. .....++..|+..+ + .+.. ....
T Consensus 112 ~~~g~l~v~~~-~~~~i~~~~~~-g~~~~~~~~~~--------~~~~~~i~~d~~g~---l-~v~~----------~~~~ 167 (300)
T 2qc5_A 112 GLNGDIWFTQL-NGDRIGKLTAD-GTIYEYDLPNK--------GSYPAFITLGSDNA---L-WFTE----------NQNN 167 (300)
T ss_dssp CSTTCEEEEET-TTTEEEEECTT-SCEEEEECSST--------TCCEEEEEECTTSS---E-EEEE----------TTTT
T ss_pred CCCCCEEEEcc-CCCeEEEECCC-CCEEEccCCCC--------CCCceeEEECCCCC---E-EEEe----------cCCC
Confidence 34676655542 35678888987 66554332211 11234566665432 2 2222 0134
Q ss_pred eEEEEEcCCCceEEccCCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCcee
Q 036467 175 EARVYSLASDKWKKINGGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQI 252 (369)
Q Consensus 175 ~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~ 252 (369)
.+.+|+. ++..... . .+.......++.+ +|.+|+...... .|..||. +.++..+.+|... ..-.
T Consensus 168 ~i~~~~~-~g~~~~~-~-~~~~~~~~~~i~~d~~g~l~v~~~~~~------~i~~~~~-~g~~~~~~~~~~~----~~~~ 233 (300)
T 2qc5_A 168 SIGRITN-TGKLEEY-P-LPTNAAAPVGITSGNDGALWFVEIMGN------KIGRITT-TGEISEYDIPTPN----ARPH 233 (300)
T ss_dssp EEEEECT-TCCEEEE-E-CSSTTCCEEEEEECTTSSEEEEETTTT------EEEEECT-TCCEEEEECSSTT----CCEE
T ss_pred eEEEECC-CCcEEEe-e-CCCCCCCcceEEECCCCCEEEEccCCC------EEEEEcC-CCcEEEEECCCCC----CCce
Confidence 5666766 5555544 1 1111111122333 588877664432 7999999 6667666565332 1122
Q ss_pred EEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC
Q 036467 253 EVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG 331 (369)
Q Consensus 253 ~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 331 (369)
.+... +|.|++.... ...+ .+++.. .... .+.++. .. .....+.+ ..+ |.|++...
T Consensus 234 ~i~~d~~g~l~v~~~~-~~~i--~~~~~~---g~~~-~~~~~~-~~--------~~~~~i~~----~~~---g~l~v~~~ 290 (300)
T 2qc5_A 234 AITAGKNSEIWFTEWG-ANQI--GRITND---NTIQ-EYQLQT-EN--------AEPHGITF----GKD---GSVWFALK 290 (300)
T ss_dssp EEEECSTTCEEEEETT-TTEE--EEECTT---SCEE-EEECCS-TT--------CCCCCEEE----CTT---SCEEEECS
T ss_pred EEEECCCCCEEEeccC-CCeE--EEECCC---CcEE-EEECCc-cC--------CccceeEe----CCC---CCEEEEcc
Confidence 34444 4787776642 2344 344431 1222 122211 00 01222334 445 77888766
Q ss_pred CCeEEEEECC
Q 036467 332 DGELILYDFE 341 (369)
Q Consensus 332 ~~~~~~ydl~ 341 (369)
. .+..||++
T Consensus 291 ~-~i~~~~p~ 299 (300)
T 2qc5_A 291 C-KIGKLNLN 299 (300)
T ss_dssp S-EEEEEEEC
T ss_pred C-ceEEeCCC
Confidence 4 79999875
No 138
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=55.01 E-value=1e+02 Score=29.39 Aligned_cols=122 Identities=10% Similarity=0.110 Sum_probs=61.7
Q ss_pred CCcEEECceEEEEee-cCCCCCceeEEEEEEC-CCc--ceeee-CCCCCcC---CCCCceeEEEE--ECCc----EEEEE
Q 036467 200 RAAVCFNECLIWKAS-RGLGRGMTVLVVAFDM-NRE--EFKEI-HRPEYKD---SHDKCQIEVGV--FRGE----FAMFH 265 (369)
Q Consensus 200 ~~~v~~~G~lyw~~~-~~~~~~~~~~il~fD~-~~e--~~~~i-~~P~~~~---~~~~~~~~l~~--~~G~----L~~~~ 265 (369)
..++..+|.+|.... .+ .|.++|. .+. .|+.- ..+.... .+......++. .+|+ |++..
T Consensus 56 ~tP~v~~g~vyv~~~~~~-------~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t 128 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFPN-------NTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ 128 (599)
T ss_dssp SCCEEETTEEEEECSTTT-------CEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC
T ss_pred eccEEECCEEEEEeCCCC-------EEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc
Confidence 345888999999876 44 7999999 654 56543 2221100 00000112334 4555 65543
Q ss_pred ecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC------CCeEEEEE
Q 036467 266 MWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG------DGELILYD 339 (369)
Q Consensus 266 ~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~yd 339 (369)
. .. .+..|+....+..|.... ..... .......|+.. + +.|++... ++.++.||
T Consensus 129 ~--dg--~l~AlDa~TG~~~W~~~~--~~~~~-----~~~~~ssP~v~------~---g~V~vg~~g~e~g~~g~v~A~D 188 (599)
T 1w6s_A 129 L--DG--NVAALNAETGETVWKVEN--SDIKV-----GSTLTIAPYVV------K---DKVIIGSSGAELGVRGYLTAYD 188 (599)
T ss_dssp T--TS--EEEEEETTTCCEEEEEEC--CCGGG-----TCBCCSCCEEE------T---TEEEECCBCGGGTCCCEEEEEE
T ss_pred C--CC--EEEEEECCCCCEEEeecC--CCCCc-----cceeecCCEEE------C---CEEEEEecccccCCCCeEEEEE
Confidence 2 11 344555332345576431 11000 00112344444 3 56666432 35699999
Q ss_pred CCCCeEEEe
Q 036467 340 FENEIATDF 348 (369)
Q Consensus 340 l~~~~~~~v 348 (369)
.+|++..+-
T Consensus 189 ~~TG~~~W~ 197 (599)
T 1w6s_A 189 VKTGEQVWR 197 (599)
T ss_dssp TTTCCEEEE
T ss_pred CCCCcEEEE
Confidence 999986654
No 139
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=55.00 E-value=92 Score=25.99 Aligned_cols=67 Identities=9% Similarity=0.123 Sum_probs=36.6
Q ss_pred CcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEE-ECCCeEEE
Q 036467 259 GEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIE-KGDGELIL 337 (369)
Q Consensus 259 G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~ 337 (369)
|.+.+. ......+.||-++. -..+.++.-..- ....+.+ ..+ +.+++. ..++.+..
T Consensus 198 ~~~l~s-~s~D~~i~iWd~~~------~~~~~~~~~h~~---------~v~~~~~----~p~---~~~l~s~s~Dg~i~i 254 (304)
T 2ynn_A 198 KPYMIT-ASDDLTIKIWDYQT------KSCVATLEGHMS---------NVSFAVF----HPT---LPIIISGSEDGTLKI 254 (304)
T ss_dssp CCEEEE-EETTSEEEEEETTT------TEEEEEEECCSS---------CEEEEEE----CSS---SSEEEEEETTSCEEE
T ss_pred CCEEEE-EcCCCeEEEEeCCC------CccceeeCCCCC---------CEEEEEE----CCC---CCEEEEEcCCCeEEE
Confidence 444443 34456999998864 123334332111 1223334 444 444444 45667999
Q ss_pred EECCCCeEEEe
Q 036467 338 YDFENEIATDF 348 (369)
Q Consensus 338 ydl~~~~~~~v 348 (369)
||+++.+..+.
T Consensus 255 Wd~~~~~~~~~ 265 (304)
T 2ynn_A 255 WNSSTYKVEKT 265 (304)
T ss_dssp EETTTCCEEEE
T ss_pred EECCCCceeee
Confidence 99999886544
No 140
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=54.70 E-value=1e+02 Score=26.36 Aligned_cols=161 Identities=12% Similarity=0.192 Sum_probs=72.6
Q ss_pred eecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcc
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYEC 174 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (369)
+-+|-++.... .++.+.|||..++++.......... ......+.+.|. +.+- +. .. ...
T Consensus 25 sp~g~~las~~-~D~~i~iw~~~~~~~~~~~~~~~~h------~~~v~~~~~sp~-g~~l-~s-~s-----------~D~ 83 (345)
T 3fm0_A 25 NPAGTLLASCG-GDRRIRIWGTEGDSWICKSVLSEGH------QRTVRKVAWSPC-GNYL-AS-AS-----------FDA 83 (345)
T ss_dssp CTTSSCEEEEE-TTSCEEEEEEETTEEEEEEEECSSC------SSCEEEEEECTT-SSEE-EE-EE-----------TTS
T ss_pred CCCCCEEEEEc-CCCeEEEEEcCCCcceeeeeecccc------CCcEEEEEECCC-CCEE-EE-EE-----------CCC
Confidence 33444333322 5678899998877654221111111 112234455553 2332 22 22 234
Q ss_pred eEEEEEcCCCceEEccCCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcc-eeeeC-CCCCcCCCCCc
Q 036467 175 EARVYSLASDKWKKINGGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREE-FKEIH-RPEYKDSHDKC 250 (369)
Q Consensus 175 ~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~-~~~i~-~P~~~~~~~~~ 250 (369)
.+.+++..++.+..+ ..+.-....-..+.+ +|.....+..+. .|..+|+.++. ...+. +.... .
T Consensus 84 ~v~iw~~~~~~~~~~-~~~~~h~~~v~~v~~sp~~~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~h~-----~ 151 (345)
T 3fm0_A 84 TTCIWKKNQDDFECV-TTLEGHENEVKSVAWAPSGNLLATCSRDK------SVWVWEVDEEDEYECVSVLNSHT-----Q 151 (345)
T ss_dssp CEEEEEECCC-EEEE-EEECCCSSCEEEEEECTTSSEEEEEETTS------CEEEEEECTTSCEEEEEEECCCC-----S
T ss_pred cEEEEEccCCCeEEE-EEccCCCCCceEEEEeCCCCEEEEEECCC------eEEEEECCCCCCeEEEEEecCcC-----C
Confidence 577788777766443 111100000011222 455544444432 67788887642 22221 11111 1
Q ss_pred eeEEEEE--CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEc
Q 036467 251 QIEVGVF--RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIG 293 (369)
Q Consensus 251 ~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~ 293 (369)
.+.-+.+ +|.+.+... ....+.+|.++. ..|.....+.
T Consensus 152 ~v~~~~~~p~~~~l~s~s-~d~~i~~w~~~~----~~~~~~~~~~ 191 (345)
T 3fm0_A 152 DVKHVVWHPSQELLASAS-YDDTVKLYREEE----DDWVCCATLE 191 (345)
T ss_dssp CEEEEEECSSSSCEEEEE-TTSCEEEEEEET----TEEEEEEEEC
T ss_pred CeEEEEECCCCCEEEEEe-CCCcEEEEEecC----CCEEEEEEec
Confidence 1222223 366555444 345899998874 3466555554
No 141
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=54.50 E-value=1.6e+02 Score=28.69 Aligned_cols=199 Identities=11% Similarity=0.034 Sum_probs=96.6
Q ss_pred cccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceE
Q 036467 97 NGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEA 176 (369)
Q Consensus 97 ~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 176 (369)
+|-|.+.. ....++.+||.++++..+..... .. ......+..|... -+++.. ....+
T Consensus 373 ~g~lWigt--~~~Gl~~~~~~~~~~~~~~~~~~-~~-----~~~v~~i~~d~~g----~lWigt-----------~~~Gl 429 (781)
T 3v9f_A 373 QGKLWIGT--DGGGINVFENGKRVAIYNKENRE-LL-----SNSVLCSLKDSEG----NLWFGT-----------YLGNI 429 (781)
T ss_dssp TSCEEEEE--BSSCEEEEETTEEEEECC------CC-----CSBEEEEEECTTS----CEEEEE-----------TTEEE
T ss_pred CCCEEEEe--CCCcEEEEECCCCeEEEccCCCC-CC-----CcceEEEEECCCC----CEEEEe-----------ccCCE
Confidence 45554443 24568888988887766532111 10 1122334444321 133333 12467
Q ss_pred EEEEcCCCceEEccCCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEE
Q 036467 177 RVYSLASDKWKKINGGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEV 254 (369)
Q Consensus 177 ~vys~~t~~W~~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l 254 (369)
..|+..++.++.. .........-..+.. +|. .|++... .+..||..+++|..+...............+
T Consensus 430 ~~~~~~~~~~~~~-~~~~~~~~~v~~i~~d~~g~-lwigt~~-------Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 500 (781)
T 3v9f_A 430 SYYNTRLKKFQII-ELEKNELLDVRVFYEDKNKK-IWIGTHA-------GVFVIDLASKKVIHHYDTSNSQLLENFVRSI 500 (781)
T ss_dssp EEECSSSCEEEEC-CSTTTCCCCEEEEEECTTSE-EEEEETT-------EEEEEESSSSSCCEEECTTTSSCSCSCEEEE
T ss_pred EEEcCCCCcEEEe-ccCCCCCCeEEEEEECCCCC-EEEEECC-------ceEEEeCCCCeEEecccCcccccccceeEEE
Confidence 7788888888877 221000000012333 355 5666543 7999999999998774322110001122344
Q ss_pred EEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCC
Q 036467 255 GVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDG 333 (369)
Q Consensus 255 ~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 333 (369)
.+. +|.|.+..... . +..++. ....+.. +....- ........+.. ..+ |.|++....
T Consensus 501 ~~d~~g~lWigt~~~--G--l~~~~~--~~~~~~~---~~~~~~-----l~~~~i~~i~~----d~~---g~lWi~T~~- 558 (781)
T 3v9f_A 501 AQDSEGRFWIGTFGG--G--VGIYTP--DMQLVRK---FNQYEG-----FCSNTINQIYR----SSK---GQMWLATGE- 558 (781)
T ss_dssp EECTTCCEEEEESSS--C--EEEECT--TCCEEEE---ECTTTT-----CSCSCEEEEEE----CTT---SCEEEEETT-
T ss_pred EEcCCCCEEEEEcCC--C--EEEEeC--CCCeEEE---ccCCCC-----CCCCeeEEEEE----CCC---CCEEEEECC-
Confidence 444 47777665422 2 444543 1223332 211110 00111222222 334 788888774
Q ss_pred eE-EEEECCCCeEEEeE
Q 036467 334 EL-ILYDFENEIATDFK 349 (369)
Q Consensus 334 ~~-~~ydl~~~~~~~v~ 349 (369)
.+ +.||.++++++.+.
T Consensus 559 Glv~~~d~~~~~~~~~~ 575 (781)
T 3v9f_A 559 GLVCFPSARNFDYQVFQ 575 (781)
T ss_dssp EEEEESCTTTCCCEEEC
T ss_pred CceEEECCCCCcEEEcc
Confidence 47 99999999877653
No 142
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=53.80 E-value=97 Score=25.85 Aligned_cols=47 Identities=11% Similarity=0.126 Sum_probs=31.5
Q ss_pred CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE-CCcEEEEE
Q 036467 206 NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF-RGEFAMFH 265 (369)
Q Consensus 206 ~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~G~L~~~~ 265 (369)
+|.+||...... .|..+|+.+.+...+..|... ..++.. +|+|++..
T Consensus 24 ~~~l~~~d~~~~------~i~~~d~~~~~~~~~~~~~~~-------~~i~~~~dG~l~v~~ 71 (297)
T 3g4e_A 24 SNSLLFVDIPAK------KVCRWDSFTKQVQRVTMDAPV-------SSVALRQSGGYVATI 71 (297)
T ss_dssp TTEEEEEETTTT------EEEEEETTTCCEEEEECSSCE-------EEEEEBTTSSEEEEE
T ss_pred CCEEEEEECCCC------EEEEEECCCCcEEEEeCCCce-------EEEEECCCCCEEEEE
Confidence 488999987653 899999999877766655332 233444 47765543
No 143
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=53.75 E-value=42 Score=29.50 Aligned_cols=27 Identities=19% Similarity=0.350 Sum_probs=23.2
Q ss_pred CCeEEEEECCCeEEEEECCCCeEEEeE
Q 036467 323 KNFLLIEKGDGELILYDFENEIATDFK 349 (369)
Q Consensus 323 ~~~i~~~~~~~~~~~ydl~~~~~~~v~ 349 (369)
-|.||++++.+-++.||++|++.-...
T Consensus 271 ygviyviTK~G~ihlyDleTgt~i~~n 297 (365)
T 2xzh_A 271 HDVVFLITKYGYIHLYDLETGTCIYMN 297 (365)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCcEEEEEEcccCcEEEEe
Confidence 489999999888999999999975553
No 144
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=53.12 E-value=34 Score=24.65 Aligned_cols=44 Identities=11% Similarity=0.319 Sum_probs=31.3
Q ss_pred ceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEe
Q 036467 109 EDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIY 160 (369)
Q Consensus 109 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~ 160 (369)
..+++++|.|++|. |...... ....+.+..|...+.|.|+...-
T Consensus 11 A~V~~~d~~~~~W~--p~~~g~~------gvs~V~~~~d~~~~~yrI~~~~l 54 (115)
T 1egx_A 11 ATVMLYDDGNKRWL--PAGTGPQ------AFSRVQIYHNPTANSFRVVGRKM 54 (115)
T ss_dssp EECBEECTTTSSCC--BSSCSCC------CCEEEEEEEETTTTEEEEEEEES
T ss_pred EEEEEEcCCCCcee--ECCCCCC------CccEEEEEEeCCCCEEEEEEEEc
Confidence 46889999999975 4332100 23456788898889999998764
No 145
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=52.77 E-value=1.7e+02 Score=28.24 Aligned_cols=117 Identities=11% Similarity=0.039 Sum_probs=60.9
Q ss_pred EECceEEEEeecCCCCCceeEEEEEECCCc---ceeeeCCCCCcCCCCCceeEEEEECCcEEEEEecCCCeEEEEEeccC
Q 036467 204 CFNECLIWKASRGLGRGMTVLVVAFDMNRE---EFKEIHRPEYKDSHDKCQIEVGVFRGEFAMFHMWREDRVEIWTMKDF 280 (369)
Q Consensus 204 ~~~G~lyw~~~~~~~~~~~~~il~fD~~~e---~~~~i~~P~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~ 280 (369)
..++.+|++...+.. ...|+..|+++. .|+.+ .|... ... .+...++.|.+....+ ..-.|++++-.
T Consensus 289 ~~g~~l~~~t~~~~~---~~~l~~~d~~~~~~~~~~~l-~~~~~----~~~-~~s~~g~~lv~~~~~~-g~~~l~~~d~~ 358 (693)
T 3iuj_A 289 NKGSTLYLLTNRDAP---NRRLVTVDAANPGPAHWRDL-IPERQ----QVL-TVHSGSGYLFAEYMVD-ATARVEQFDYE 358 (693)
T ss_dssp EETTEEEEEECTTCT---TCEEEEEETTSCCGGGCEEE-ECCCS----SCE-EEEEETTEEEEEEEET-TEEEEEEECTT
T ss_pred ccCCEEEEEECCCCC---CCEEEEEeCCCCCccccEEE-ecCCC----CEE-EEEEECCEEEEEEEEC-CeeEEEEEECC
Confidence 346778888765421 248999999873 46654 22221 112 4444456666655543 34456666532
Q ss_pred CCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECC----CeEEEEECCCCeEEEeE
Q 036467 281 GARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGD----GELILYDFENEIATDFK 349 (369)
Q Consensus 281 ~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~ydl~~~~~~~v~ 349 (369)
+ .+. ..+..... ....++ .. ..+ ++.+++...+ ..++.||+++++.+.+.
T Consensus 359 g---~~~--~~l~~p~~----------~~~~~~-~~-~~d--~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 359 G---KRV--REVALPGL----------GSVSGF-NG-KHD--DPALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp S---CEE--EEECCSSS----------SEEEEC-CC-CTT--CSCEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred C---Cee--EEeecCCC----------ceEEee-ec-CCC--CCEEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 2 232 23332211 111122 11 222 4677776433 46999999998877664
No 146
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=50.54 E-value=1.2e+02 Score=25.84 Aligned_cols=47 Identities=4% Similarity=-0.089 Sum_probs=31.4
Q ss_pred CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEE-ECCcEEEEE
Q 036467 206 NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGV-FRGEFAMFH 265 (369)
Q Consensus 206 ~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~-~~G~L~~~~ 265 (369)
+|.+||...... .|..+|+.+.+...+..|... ..++. -+|++++..
T Consensus 60 ~~~l~~~d~~~~------~i~~~d~~~~~~~~~~~~~~v-------~~i~~~~dg~l~v~~ 107 (326)
T 2ghs_A 60 SGTAWWFNILER------ELHELHLASGRKTVHALPFMG-------SALAKISDSKQLIAS 107 (326)
T ss_dssp TTEEEEEEGGGT------EEEEEETTTTEEEEEECSSCE-------EEEEEEETTEEEEEE
T ss_pred CCEEEEEECCCC------EEEEEECCCCcEEEEECCCcc-------eEEEEeCCCeEEEEE
Confidence 378999986642 899999999887766655322 22333 368877654
No 147
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=50.39 E-value=1.1e+02 Score=25.69 Aligned_cols=69 Identities=9% Similarity=0.154 Sum_probs=38.3
Q ss_pred CcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEE
Q 036467 259 GEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILY 338 (369)
Q Consensus 259 G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~y 338 (369)
|++.++.. ....+.+|-+... ...+..+....- ....+.+ ..+ +..++....++.+..|
T Consensus 187 ~~~l~~~~-~dg~i~i~d~~~~-----~~~~~~~~~~~~---------~v~~~~~----~~~--~~~l~~~~~d~~i~v~ 245 (369)
T 3zwl_B 187 GKYIIAGH-KDGKISKYDVSNN-----YEYVDSIDLHEK---------SISDMQF----SPD--LTYFITSSRDTNSFLV 245 (369)
T ss_dssp GCEEEEEE-TTSEEEEEETTTT-----TEEEEEEECCSS---------CEEEEEE----CTT--SSEEEEEETTSEEEEE
T ss_pred CCEEEEEc-CCCEEEEEECCCC-----cEeEEEEecCCC---------ceeEEEE----CCC--CCEEEEecCCceEEEE
Confidence 55555544 3458899987641 223333332111 1233444 444 3455555566779999
Q ss_pred ECCCCeEEEe
Q 036467 339 DFENEIATDF 348 (369)
Q Consensus 339 dl~~~~~~~v 348 (369)
|+++++....
T Consensus 246 d~~~~~~~~~ 255 (369)
T 3zwl_B 246 DVSTLQVLKK 255 (369)
T ss_dssp ETTTCCEEEE
T ss_pred ECCCCceeee
Confidence 9998876443
No 148
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=50.16 E-value=1.1e+02 Score=25.61 Aligned_cols=71 Identities=20% Similarity=0.272 Sum_probs=35.8
Q ss_pred EEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECC-
Q 036467 263 MFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFE- 341 (369)
Q Consensus 263 ~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~- 341 (369)
++.......+.||.+++... ..|.... +.. . .....-+.+ ..+ |..|.....++.+..|+..
T Consensus 231 las~s~D~~v~iw~~~~~~~-~~~~~~~-~~~--~-------~~~v~~v~~----sp~--g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 231 IASCSQDGRVFIWTCDDASS-NTWSPKL-LHK--F-------NDVVWHVSW----SIT--ANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEEETTCEEEEEECSSTTC-CCCBCCE-EEE--C-------SSCEEEEEE----CTT--TCCEEEEESSSCEEEEEECT
T ss_pred EEEEcCCCeEEEEEccCccc-cchhhhh-hhc--C-------CCcEEEEEE----cCC--CCEEEEEcCCCeEEEEEECC
Confidence 33333456999999876321 2343211 110 0 011233444 444 2444444556668888875
Q ss_pred CCeEEEeEE
Q 036467 342 NEIATDFKI 350 (369)
Q Consensus 342 ~~~~~~v~~ 350 (369)
.++|+.+..
T Consensus 294 ~g~~~~~~~ 302 (316)
T 3bg1_A 294 DGQWVCISD 302 (316)
T ss_dssp TSCEEEEEE
T ss_pred CCcEEEeee
Confidence 456777643
No 149
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=49.81 E-value=4.7 Score=35.87 Aligned_cols=25 Identities=12% Similarity=0.004 Sum_probs=17.4
Q ss_pred EEECceEEEEeecCCCCCceeEEEEEECCCcc
Q 036467 203 VCFNECLIWKASRGLGRGMTVLVVAFDMNREE 234 (369)
Q Consensus 203 v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~ 234 (369)
+..+|.+|....++ .|.++|..+.+
T Consensus 6 ~v~~~~v~~gs~dg-------~v~a~d~~tG~ 30 (369)
T 2hz6_A 6 TLPETLLFVSTLDG-------SLHAVSKRTGS 30 (369)
T ss_dssp --CTTEEEEEETTS-------EEEEEETTTCC
T ss_pred eeeCCEEEEEcCCC-------EEEEEECCCCC
Confidence 56678888776554 89999987653
No 150
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=49.38 E-value=1.1e+02 Score=25.32 Aligned_cols=98 Identities=18% Similarity=0.288 Sum_probs=47.8
Q ss_pred EEEEEECCCcceeee-CCCCCcCCCCCceeEEEEE---CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEccccccc
Q 036467 224 LVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVF---RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALIN 299 (369)
Q Consensus 224 ~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~---~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~ 299 (369)
.|..+|+.++....+ .+.. +...-..+.-. +|.+.+... .+..+.||-++. ..|..+..+.....
T Consensus 32 ~v~iw~~~~~~~~~~~~l~g----H~~~V~~v~~s~~~~g~~l~s~s-~D~~v~iWd~~~----~~~~~~~~~~~h~~-- 100 (297)
T 2pm7_B 32 TIKIFEVEGETHKLIDTLTG----HEGPVWRVDWAHPKFGTILASCS-YDGKVMIWKEEN----GRWSQIAVHAVHSA-- 100 (297)
T ss_dssp CEEEEEBCSSCBCCCEEECC----CSSCEEEEEECCGGGCSEEEEEE-TTTEEEEEEBSS----SCBCCCEEECCCSS--
T ss_pred EEEEEecCCCCcEEEEEEcc----ccCCeEEEEecCCCcCCEEEEEc-CCCEEEEEEcCC----CceEEEEEeecCCC--
Confidence 677888876543222 1211 11112223222 266555444 456999999874 23554444332111
Q ss_pred ccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCC
Q 036467 300 FDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENE 343 (369)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~ 343 (369)
....+.+ .+.+. |..++....++.+..||++++
T Consensus 101 -------~v~~v~~--~p~~~--g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 101 -------SVNSVQW--APHEY--GPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp -------CEEEEEE--CCGGG--CSEEEEEETTSEEEEEEBCSS
T ss_pred -------ceeEEEe--CcCCC--CcEEEEEECCCcEEEEEecCC
Confidence 1222333 11111 234444555667889998876
No 151
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=49.05 E-value=1.9e+02 Score=27.95 Aligned_cols=145 Identities=11% Similarity=0.119 Sum_probs=74.2
Q ss_pred cceEEEEEcCCC--c-eEEccCCCCeeeccCCcE-EECceEEEEeecCCCCCceeEEEEEECCC--cceeeeCCCCCcCC
Q 036467 173 ECEARVYSLASD--K-WKKINGGIPYHISSRAAV-CFNECLIWKASRGLGRGMTVLVVAFDMNR--EEFKEIHRPEYKDS 246 (369)
Q Consensus 173 ~~~~~vys~~t~--~-W~~~~~~~p~~~~~~~~v-~~~G~lyw~~~~~~~~~~~~~il~fD~~~--e~~~~i~~P~~~~~ 246 (369)
...+.+++..++ . |+.+....... ...+ ..++.+|+....+.. ...|...|+.+ +.|..+- |...
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~---~~~~~~dg~~l~~~s~~~~~---~~~l~~~d~~~~~~~~~~l~-~~~~-- 363 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQ---WDFVDGVGDQLWFVSGDGAP---LKKIVRVDLSGSTPRFDTVV-PESK-- 363 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSC---EEEEEEETTEEEEEECTTCT---TCEEEEEECSSSSCEEEEEE-CCCS--
T ss_pred cceEEEEECCCCCCcccEEecCCCCce---EEEEeccCCEEEEEECCCCC---CCEEEEEeCCCCccccEEEe-cCCC--
Confidence 345666666665 5 76662111100 0112 245567777654321 24799999988 5777663 3221
Q ss_pred CCCceeEEEEECCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeE
Q 036467 247 HDKCQIEVGVFRGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFL 326 (369)
Q Consensus 247 ~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 326 (369)
...-.+...++.|++.... .....||+++-.+ . ....+..... .....+.+ ..+ ++.|
T Consensus 364 --~~l~~~~~~~~~lv~~~~~-dg~~~l~~~~~~g--~---~~~~l~~~~~--------~~v~~~~~----s~d--~~~l 421 (741)
T 1yr2_A 364 --DNLESVGIAGNRLFASYIH-DAKSQVLAFDLDG--K---PAGAVSLPGI--------GSASGLSG----RPG--DRHA 421 (741)
T ss_dssp --SEEEEEEEEBTEEEEEEEE-TTEEEEEEEETTS--C---EEEECBCSSS--------CEEEEEEC----CBT--CSCE
T ss_pred --CeEEEEEEECCEEEEEEEE-CCEEEEEEEeCCC--C---ceeeccCCCC--------eEEEEeec----CCC--CCEE
Confidence 1111234447777766654 3477899887322 1 2333332111 01122222 223 3567
Q ss_pred EEEECC----CeEEEEECCCCeEEEe
Q 036467 327 LIEKGD----GELILYDFENEIATDF 348 (369)
Q Consensus 327 ~~~~~~----~~~~~ydl~~~~~~~v 348 (369)
++.... ..++.||+++++.+.+
T Consensus 422 ~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 422 YLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp EEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred EEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 665422 3499999999886655
No 152
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=48.76 E-value=1.3e+02 Score=25.84 Aligned_cols=22 Identities=23% Similarity=0.211 Sum_probs=15.9
Q ss_pred CeEEEEECCCeEEEEECCCCeE
Q 036467 324 NFLLIEKGDGELILYDFENEIA 345 (369)
Q Consensus 324 ~~i~~~~~~~~~~~ydl~~~~~ 345 (369)
..++....++.+..||+++++.
T Consensus 258 ~~l~~~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 258 LHLLTVGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp SEEEEEETTSCEEEEETTTCCB
T ss_pred CEEEEecCCCeEEEEECCCCcc
Confidence 4555555666799999998764
No 153
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=48.57 E-value=1.3e+02 Score=25.63 Aligned_cols=196 Identities=9% Similarity=0.012 Sum_probs=93.6
Q ss_pred eeecccEEEeeccCCceEEEEcCCc----ccee-eCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCccc
Q 036467 94 GSCNGLLCISDQSCNEDIFLFNPST----KKYK-KLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVD 168 (369)
Q Consensus 94 ~s~~GLl~~~~~~~~~~~~V~NP~T----~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~ 168 (369)
...+|.|...+. ....++..++.+ +... .++.. .. ...++.+|+..+. +.....
T Consensus 38 d~~~~~ly~~D~-~~~~I~~~~~~g~~~~~~~~~~~~~~-~~---------~p~glavd~~~~~--ly~~d~-------- 96 (316)
T 1ijq_A 38 EVASNRIYWSDL-SQRMICSTQLDRAHGVSSYDTVISRD-IQ---------APDGLAVDWIHSN--IYWTDS-------- 96 (316)
T ss_dssp ETTTTEEEEEET-TTTEEEEEEC--------CEEEECSS-CS---------CCCEEEEETTTTE--EEEEET--------
T ss_pred EeCCCEEEEEEC-CCCcEEEEECCCCCCCcccEEEEeCC-CC---------CcCEEEEeecCCe--EEEEEC--------
Confidence 344667766664 456788888876 2222 22211 11 1125666754332 322222
Q ss_pred CCCCcceEEEEEcCCCceEEccCCCCeeeccCCcEE---ECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcC
Q 036467 169 IDSYECEARVYSLASDKWKKINGGIPYHISSRAAVC---FNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKD 245 (369)
Q Consensus 169 ~~~~~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~---~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~ 245 (369)
....+++++.....=+.+... . .....++. .+|.+||...... ..|..+|++...-..+-. ...
T Consensus 97 ---~~~~I~~~~~~g~~~~~~~~~-~--~~~P~~iavdp~~g~ly~~d~~~~-----~~I~~~~~dG~~~~~~~~-~~~- 163 (316)
T 1ijq_A 97 ---VLGTVSVADTKGVKRKTLFRE-N--GSKPRAIVVDPVHGFMYWTDWGTP-----AKIKKGGLNGVDIYSLVT-ENI- 163 (316)
T ss_dssp ---TTTEEEEEETTSSSEEEEEEC-T--TCCEEEEEEETTTTEEEEEECSSS-----CEEEEEETTSCCEEEEEC-SSC-
T ss_pred ---CCCEEEEEeCCCCceEEEEEC-C--CCCcceEEeCCCCCEEEEEccCCC-----CeEEEEcCCCCCeEEEEE-CCC-
Confidence 235677777765433333110 0 00112232 3789999875421 289999988655443311 111
Q ss_pred CCCCceeEEEEE--CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCC
Q 036467 246 SHDKCQIEVGVF--RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGK 323 (369)
Q Consensus 246 ~~~~~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (369)
..-..|+.. +|+||++... ... |++.+-.+... ..+.. .... ...|.+++. . .
T Consensus 164 ---~~P~gla~d~~~~~lY~~D~~-~~~--I~~~d~dg~~~--~~~~~--~~~~---------~~~P~giav--~-~--- 218 (316)
T 1ijq_A 164 ---QWPNGITLDLLSGRLYWVDSK-LHS--ISSIDVNGGNR--KTILE--DEKR---------LAHPFSLAV--F-E--- 218 (316)
T ss_dssp ---SCEEEEEEETTTTEEEEEETT-TTE--EEEEETTSCSC--EEEEE--CTTT---------TSSEEEEEE--E-T---
T ss_pred ---CCceEEEEeccCCEEEEEECC-CCe--EEEEecCCCce--EEEee--cCCc---------cCCcEEEEE--E-C---
Confidence 112234444 5788888753 234 55555323211 11111 1111 134566521 2 3
Q ss_pred CeEEEEEC-CCeEEEEECCCCe-EEEe
Q 036467 324 NFLLIEKG-DGELILYDFENEI-ATDF 348 (369)
Q Consensus 324 ~~i~~~~~-~~~~~~ydl~~~~-~~~v 348 (369)
+.+|+... ..++..+|..+++ .+.+
T Consensus 219 ~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 219 DKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp TEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred CEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 67887764 3569999987665 3444
No 154
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=48.51 E-value=1.2e+02 Score=25.24 Aligned_cols=183 Identities=14% Similarity=0.118 Sum_probs=86.5
Q ss_pred CCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCce
Q 036467 107 CNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKW 186 (369)
Q Consensus 107 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W 186 (369)
.++.+.+|+..+++....-... ......+.+.+. +. .+.... ....+.+|+..++.-
T Consensus 43 ~dg~i~iw~~~~~~~~~~~~~h---------~~~v~~~~~~~~-~~--~l~s~~-----------~d~~i~vwd~~~~~~ 99 (312)
T 4ery_A 43 ADKLIKIWGAYDGKFEKTISGH---------KLGISDVAWSSD-SN--LLVSAS-----------DDKTLKIWDVSSGKC 99 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCC---------SSCEEEEEECTT-SS--EEEEEE-----------TTSEEEEEETTTCCE
T ss_pred CCCeEEEEeCCCcccchhhccC---------CCceEEEEEcCC-CC--EEEEEC-----------CCCEEEEEECCCCcE
Confidence 5677888988877665432111 112234455553 22 222222 245688888877643
Q ss_pred EEccCCCCeeeccCCcEE--ECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE-CCcEEE
Q 036467 187 KKINGGIPYHISSRAAVC--FNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF-RGEFAM 263 (369)
Q Consensus 187 ~~~~~~~p~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~G~L~~ 263 (369)
...-....... ..+. -+|.....+..+. .|..+|+.+.+.... ++... .....+.-. +|++.+
T Consensus 100 ~~~~~~~~~~v---~~~~~~~~~~~l~s~~~d~------~i~iwd~~~~~~~~~-~~~~~----~~v~~~~~~~~~~~l~ 165 (312)
T 4ery_A 100 LKTLKGHSNYV---FCCNFNPQSNLIVSGSFDE------SVRIWDVKTGKCLKT-LPAHS----DPVSAVHFNRDGSLIV 165 (312)
T ss_dssp EEEEECCSSCE---EEEEECSSSSEEEEEETTS------CEEEEETTTCCEEEE-ECCCS----SCEEEEEECTTSSEEE
T ss_pred EEEEcCCCCCE---EEEEEcCCCCEEEEEeCCC------cEEEEECCCCEEEEE-ecCCC----CcEEEEEEcCCCCEEE
Confidence 21101100000 0011 1344433343332 688899887654322 11111 111122222 466655
Q ss_pred EEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCC
Q 036467 264 FHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENE 343 (369)
Q Consensus 264 ~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~ 343 (369)
.... ...+.+|-+... ..+..+..... .....+.+ ..+ +..++....++.+..||++++
T Consensus 166 ~~~~-d~~i~~wd~~~~------~~~~~~~~~~~--------~~~~~~~~----~~~--~~~l~~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 166 SSSY-DGLCRIWDTASG------QCLKTLIDDDN--------PPVSFVKF----SPN--GKYILAATLDNTLKLWDYSKG 224 (312)
T ss_dssp EEET-TSCEEEEETTTC------CEEEEECCSSC--------CCEEEEEE----CTT--SSEEEEEETTTEEEEEETTTT
T ss_pred EEeC-CCcEEEEECCCC------ceeeEEeccCC--------CceEEEEE----CCC--CCEEEEEcCCCeEEEEECCCC
Confidence 5554 458999988641 12222221110 01223344 444 244555556677999999988
Q ss_pred eEEE
Q 036467 344 IATD 347 (369)
Q Consensus 344 ~~~~ 347 (369)
+...
T Consensus 225 ~~~~ 228 (312)
T 4ery_A 225 KCLK 228 (312)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 7543
No 155
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=47.98 E-value=1.3e+02 Score=25.46 Aligned_cols=98 Identities=13% Similarity=0.082 Sum_probs=50.1
Q ss_pred cceEEEEEcCC---CceEEccCCCCeeeccCCcE--EECceEEEEeecCCCC----CceeEEEEEECCCcceeeeCCCCC
Q 036467 173 ECEARVYSLAS---DKWKKINGGIPYHISSRAAV--CFNECLIWKASRGLGR----GMTVLVVAFDMNREEFKEIHRPEY 243 (369)
Q Consensus 173 ~~~~~vys~~t---~~W~~~~~~~p~~~~~~~~v--~~~G~lyw~~~~~~~~----~~~~~il~fD~~~e~~~~i~~P~~ 243 (369)
...+.+|+..+ +..+.. ...+- ..++ .-+|.+|......... .....|..||...+....+..|..
T Consensus 206 ~~~I~~~~~~~~~~~~~~~~-~~~~g----P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g 280 (322)
T 2fp8_A 206 SHQIVKYWLEGPKKGTAEVL-VKIPN----PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPP 280 (322)
T ss_dssp GTEEEEEESSSTTTTCEEEE-EECSS----EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTT
T ss_pred CCeEEEEECCCCcCCccceE-EeCCC----CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCC
Confidence 35677777764 334433 11111 1223 3358866555431000 012379999998777777777754
Q ss_pred cCCCCCceeEEEEECCcEEEEEecCCCeEEEEEec
Q 036467 244 KDSHDKCQIEVGVFRGEFAMFHMWREDRVEIWTMK 278 (369)
Q Consensus 244 ~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~ 278 (369)
.... ....+...+|+|++.... ...+.+..++
T Consensus 281 ~~~~--~~~~~~~~~g~L~v~~~~-~~~i~~~~~~ 312 (322)
T 2fp8_A 281 FAGE--HFEQIQEHDGLLYIGTLF-HGSVGILVYD 312 (322)
T ss_dssp TTTS--CCCEEEEETTEEEEECSS-CSEEEEEEC-
T ss_pred Cccc--cceEEEEeCCEEEEeecC-CCceEEEecc
Confidence 3111 112334457888887543 3355555554
No 156
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=46.49 E-value=2e+02 Score=27.39 Aligned_cols=194 Identities=9% Similarity=-0.002 Sum_probs=98.0
Q ss_pred eeecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCc
Q 036467 94 GSCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYE 173 (369)
Q Consensus 94 ~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (369)
.+.+|.|...+. ....++.+++-......+-.... ....|+++|...+ .+.+... ..
T Consensus 357 d~~~~~ly~sD~-~~~~I~r~~~~g~~~~~v~~~~~---------~~p~GlAvD~~~~--~lY~tD~-----------~~ 413 (619)
T 3s94_A 357 DPVEGYIYWTDD-EVRAIRRSFIDGSGSQFVVTAQI---------AHPDGIAVDWVAR--NLYWTDT-----------GT 413 (619)
T ss_dssp ETTTTEEEEEET-TTTEEEEEETTSCSCEEEECSSC---------SCCCEEEEETTTT--EEEEEET-----------TT
T ss_pred EcCCCeEEEEeC-CCCeEEEEEcCCCccEEEEECCC---------CCcCceEEecccC--cEEEEeC-----------CC
Confidence 345677777664 45677788876644333322111 1223677786543 2333222 34
Q ss_pred ceEEEEEcCCCceEEccCCCCeeeccCCcEEE---CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCc
Q 036467 174 CEARVYSLASDKWKKINGGIPYHISSRAAVCF---NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKC 250 (369)
Q Consensus 174 ~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 250 (369)
..+++.++.+..-+.+ ..- .+....++.+ +|.|||...... ..|..++++...-..+- .... ..
T Consensus 414 ~~I~v~~~~G~~~~~l-~~~--~l~~P~~iavdp~~G~ly~tD~g~~-----~~I~r~~~dG~~~~~l~-~~~l----~~ 480 (619)
T 3s94_A 414 DRIEVTRLNGTMRKIL-ISE--DLEEPRAIVLDPMVGYMYWTDWGEI-----PKIERAALDGSDRVVLV-NTSL----GW 480 (619)
T ss_dssp TEEEEEETTSCSCEEE-ECT--TCCSEEEEEEETTTTEEEEEECSSS-----CEEEEEETTSCSCEEEE-CSSC----SC
T ss_pred CcEEEEeCCCCeEEEE-EEC--CCCCeeeEEEEcCCCcEEEecCCCC-----CEEEEEccCCCccEEEE-eCCC----CC
Confidence 5788888876543444 111 1111123433 599999986431 28999998765433331 1111 11
Q ss_pred eeEEEEE--CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEE
Q 036467 251 QIEVGVF--RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLI 328 (369)
Q Consensus 251 ~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 328 (369)
-..|+.. +|+||++.... . .|+..+-.+... + .+-...+ ..|.+++. . + +.||+
T Consensus 481 P~GlalD~~~~~LY~aD~~~-~--~I~~~~~dG~~~---~--~~~~~~l----------~~P~glav--~-~---~~ly~ 536 (619)
T 3s94_A 481 PNGLALDYDEGKIYWGDAKT-D--KIEVMNTDGTGR---R--VLVEDKI----------PHIFGFTL--L-G---DYVYW 536 (619)
T ss_dssp EEEEEEETTTTEEEEEETTT-T--EEEEEESSSCCC---E--EEEECCC----------CSSCCEEE--E-T---TEEEE
T ss_pred CeeeEEcccCCEEEEEECCC-C--EEEEEecCCCce---E--EEeccCC----------CCcEEEEE--E-C---CEEEE
Confidence 1234444 58999987542 2 455555333321 1 1111111 24444411 2 2 56776
Q ss_pred EECC-CeEEEEECCCCeEEE
Q 036467 329 EKGD-GELILYDFENEIATD 347 (369)
Q Consensus 329 ~~~~-~~~~~ydl~~~~~~~ 347 (369)
.... ..+...|..++.-+.
T Consensus 537 tD~~~~~I~~~~k~~g~~~~ 556 (619)
T 3s94_A 537 TDWQRRSIERVHKRSAEREV 556 (619)
T ss_dssp ECTTSSCEEEEESSSCCEEE
T ss_pred eecCCCeEEEEEcCCCceEE
Confidence 6543 348888888885433
No 157
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=46.34 E-value=78 Score=30.80 Aligned_cols=56 Identities=7% Similarity=0.027 Sum_probs=31.3
Q ss_pred cceEEEEEcCCCceEEccCCCCeeeccCCc-EEECceEEEEeecCCCCCceeEEEEEECCCcce
Q 036467 173 ECEARVYSLASDKWKKINGGIPYHISSRAA-VCFNECLIWKASRGLGRGMTVLVVAFDMNREEF 235 (369)
Q Consensus 173 ~~~~~vys~~t~~W~~~~~~~p~~~~~~~~-v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~ 235 (369)
...+++++.....-+.+ ......+....+ ....+.+||...... .|..+|..+.+.
T Consensus 561 ~~~I~~~d~dG~~~~~~-~~~~~~~~~P~glavd~~~lywtd~~~~------~V~~~d~~~G~~ 617 (699)
T 1n7d_A 561 LHSISSIDVNGGNRKTI-LEDEKRLAHPFSLAVFEDKVFWTDIINE------AIFSANRLTGSD 617 (699)
T ss_dssp TTEEEEECSSSSCCEEE-CCCSSSCSSCCCCEEETTEEEEECSTTT------CEEEEETTTEEE
T ss_pred CCeEEEEccCCCceEEE-EecCCcCCCceEeEEECCEEEEEeCCCC------eEEEEEccCCCc
Confidence 45677777755433333 221111111122 446779999986542 799999876544
No 158
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=45.94 E-value=1.3e+02 Score=25.12 Aligned_cols=146 Identities=7% Similarity=-0.099 Sum_probs=80.0
Q ss_pred CcceEEEEEcCCCceEEccCCCCeeeccCCc-EEECceEEEEeecCCCCCceeEEEEEECCCcc-eeeeCCCCCcCCCCC
Q 036467 172 YECEARVYSLASDKWKKINGGIPYHISSRAA-VCFNECLIWKASRGLGRGMTVLVVAFDMNREE-FKEIHRPEYKDSHDK 249 (369)
Q Consensus 172 ~~~~~~vys~~t~~W~~~~~~~p~~~~~~~~-v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~-~~~i~~P~~~~~~~~ 249 (369)
....+.+++..+++=... ..++..... .+ ...++.+|.+..... .+..+|..+.+ -..++.+ ..
T Consensus 42 ~~s~v~~iD~~tg~v~~~-i~l~~~~fg-eGi~~~g~~lyv~t~~~~------~v~viD~~t~~v~~~i~~g-~~----- 107 (266)
T 2iwa_A 42 GRSSVRQVALQTGKVENI-HKMDDSYFG-EGLTLLNEKLYQVVWLKN------IGFIYDRRTLSNIKNFTHQ-MK----- 107 (266)
T ss_dssp TTCEEEEEETTTCCEEEE-EECCTTCCE-EEEEEETTEEEEEETTCS------EEEEEETTTTEEEEEEECC-SS-----
T ss_pred CCCEEEEEECCCCCEEEE-EecCCCcce-EEEEEeCCEEEEEEecCC------EEEEEECCCCcEEEEEECC-CC-----
Confidence 357789999988753322 111111111 12 444678999987653 89999998754 3455665 11
Q ss_pred ceeEEEEECCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEE
Q 036467 250 CQIEVGVFRGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIE 329 (369)
Q Consensus 250 ~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 329 (369)
....|.-.+++|++... . =.|++++- ++-..+.+|....-. .....+..+.. . + |++|..
T Consensus 108 ~g~glt~Dg~~l~vs~g--s--~~l~viD~----~t~~v~~~I~Vg~~~------~p~~~~nele~--~-d---g~lyvn 167 (266)
T 2iwa_A 108 DGWGLATDGKILYGSDG--T--SILYEIDP----HTFKLIKKHNVKYNG------HRVIRLNELEY--I-N---GEVWAN 167 (266)
T ss_dssp SCCEEEECSSSEEEECS--S--SEEEEECT----TTCCEEEEEECEETT------EECCCEEEEEE--E-T---TEEEEE
T ss_pred CeEEEEECCCEEEEECC--C--CeEEEEEC----CCCcEEEEEEECCCC------cccccceeEEE--E-C---CEEEEe
Confidence 12234443457776532 2 26788875 234455565542210 00112222211 3 4 688876
Q ss_pred EC-CCeEEEEECCCCeE-EEeEEe
Q 036467 330 KG-DGELILYDFENEIA-TDFKIQ 351 (369)
Q Consensus 330 ~~-~~~~~~ydl~~~~~-~~v~~~ 351 (369)
.. ...+...|+++++. .++...
T Consensus 168 ~~~~~~V~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 168 IWQTDCIARISAKDGTLLGWILLP 191 (266)
T ss_dssp ETTSSEEEEEETTTCCEEEEEECH
T ss_pred cCCCCeEEEEECCCCcEEEEEECC
Confidence 64 45699999999986 555543
No 159
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=45.44 E-value=62 Score=23.44 Aligned_cols=41 Identities=17% Similarity=0.378 Sum_probs=29.5
Q ss_pred CceEEEEcCCcc-ceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEE
Q 036467 108 NEDIFLFNPSTK-KYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSI 159 (369)
Q Consensus 108 ~~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 159 (369)
...++.+||.|+ .|...-.. ...+.+-+|+..+.|+|+.+.
T Consensus 10 rA~V~~~D~~tk~~W~p~g~~-----------~~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 10 RAHVFQIDPNTKKNWVPTSKH-----------AVTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEEECTTTSCSEEESCSS-----------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEEcCCCCCceEeCCCC-----------ceEEEEEEcCCCCEEEEEEcc
Confidence 357899999996 99754322 134567778888889998854
No 160
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=44.33 E-value=1.4e+02 Score=24.92 Aligned_cols=33 Identities=27% Similarity=0.340 Sum_probs=23.4
Q ss_pred EEECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCC
Q 036467 203 VCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEY 243 (369)
Q Consensus 203 v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~ 243 (369)
+.-+|.+ |++..+ .|..||++.+....+..|..
T Consensus 246 ~d~~G~l-wv~~~~-------gv~~~~~~g~~~~~~~~~~~ 278 (305)
T 3dr2_A 246 VDRGGWL-WSSSGT-------GVCVFDSDGQLLGHIPTPGT 278 (305)
T ss_dssp ECTTSCE-EECCSS-------EEEEECTTSCEEEEEECSSC
T ss_pred ECCCCCE-EEecCC-------cEEEECCCCCEEEEEECCCc
Confidence 3446885 454433 79999999888888887763
No 161
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=42.51 E-value=2.4e+02 Score=27.05 Aligned_cols=194 Identities=10% Similarity=0.037 Sum_probs=94.2
Q ss_pred ceEEEEcCCcccee--eCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCce
Q 036467 109 EDIFLFNPSTKKYK--KLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKW 186 (369)
Q Consensus 109 ~~~~V~NP~T~~~~--~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W 186 (369)
.++++++.-|++.. .+-..+.. .....+..+.+. +.|.++.... ......+.+.+..++.|
T Consensus 202 ~~v~~~~l~t~~~~~~lv~~~~~~-------~~~~~~~~~SpD-G~~l~~~~~~---------~~~~~~l~~~~~~~~~~ 264 (695)
T 2bkl_A 202 TTIRYHTLGTEPSKDTVVHERTGD-------PTTFLQSDLSRD-GKYLFVYILR---------GWSENDVYWKRPGEKDF 264 (695)
T ss_dssp CEEEEEETTSCGGGCEEEECCCCC-------TTCEEEEEECTT-SCCEEEEEEE---------TTTEEEEEEECTTCSSC
T ss_pred CEEEEEECCCCchhceEEEecCCC-------CEEEEEEEECCC-CCEEEEEEeC---------CCCceEEEEEcCCCCce
Confidence 35888888877632 22111110 112223444443 4555554433 11234555555556678
Q ss_pred EEccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcc---eeeeCCCCCcCCCCCceeEEEEECCcEEE
Q 036467 187 KKINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREE---FKEIHRPEYKDSHDKCQIEVGVFRGEFAM 263 (369)
Q Consensus 187 ~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~---~~~i~~P~~~~~~~~~~~~l~~~~G~L~~ 263 (369)
+.+....... ...+.-+|.+|+....+.. ...|..+|+.+.. |+.+-.+... .....+...+|+|++
T Consensus 265 ~~l~~~~~~~---~~~~~~~g~l~~~s~~~~~---~~~l~~~d~~~~~~~~~~~l~~~~~~----~~l~~~~~~~~~lv~ 334 (695)
T 2bkl_A 265 RLLVKGVGAK---YEVHAWKDRFYVLTDEGAP---RQRVFEVDPAKPARASWKEIVPEDSS----ASLLSVSIVGGHLSL 334 (695)
T ss_dssp EEEEECSSCC---EEEEEETTEEEEEECTTCT---TCEEEEEBTTBCSGGGCEEEECCCSS----CEEEEEEEETTEEEE
T ss_pred EEeecCCCce---EEEEecCCcEEEEECCCCC---CCEEEEEeCCCCCccCCeEEecCCCC----CeEEEEEEECCEEEE
Confidence 8772111100 1123456776665442211 2489999997754 6665322211 011223444788777
Q ss_pred EEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECC----CeEEEEE
Q 036467 264 FHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGD----GELILYD 339 (369)
Q Consensus 264 ~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~yd 339 (369)
.... .....||+++-.+ . ....+..... .....+.+ ..+ ++.+++.... ..++.||
T Consensus 335 ~~~~-dg~~~l~~~~~~g--~---~~~~l~~~~~--------~~v~~~~~----s~d--~~~l~~~~ss~~~P~~v~~~d 394 (695)
T 2bkl_A 335 EYLK-DATSEVRVATLKG--K---PVRTVQLPGV--------GAASNLMG----LED--LDDAYYVFTSFTTPRQIYKTS 394 (695)
T ss_dssp EEEE-TTEEEEEEEETTC--C---EEEECCCSSS--------SEECCCBS----CTT--CSEEEEEEEETTEEEEEEEEE
T ss_pred EEEE-CCEEEEEEEeCCC--C---eeEEecCCCC--------eEEEEeec----CCC--CCEEEEEEcCCCCCCEEEEEE
Confidence 6654 4478899887322 1 2333332111 01111222 223 3566665422 3489999
Q ss_pred CCCCeEEEeE
Q 036467 340 FENEIATDFK 349 (369)
Q Consensus 340 l~~~~~~~v~ 349 (369)
+++++.+.+.
T Consensus 395 ~~~g~~~~l~ 404 (695)
T 2bkl_A 395 VSTGKSELWA 404 (695)
T ss_dssp TTTCCEEEEE
T ss_pred CCCCcEEEEe
Confidence 9998876554
No 162
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=42.49 E-value=2.4e+02 Score=27.18 Aligned_cols=56 Identities=13% Similarity=0.077 Sum_probs=33.5
Q ss_pred eEEEEEcCCC--ceEEccCCCCeee--------ccCCcEEECceEEEEeecCCCCCceeEEEEEECCCc--ceeee
Q 036467 175 EARVYSLASD--KWKKINGGIPYHI--------SSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNRE--EFKEI 238 (369)
Q Consensus 175 ~~~vys~~t~--~W~~~~~~~p~~~--------~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e--~~~~i 238 (369)
.+..++..|+ .|+.- ...+... .....++.+|.+|.....+ .|.++|..+. .|+.-
T Consensus 81 ~v~AlD~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg-------~l~AlDa~TG~~~W~~~ 148 (689)
T 1yiq_A 81 VVYALDARDGRLIWKYD-PQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDG-------RLEAIDAKTGQRAWSVD 148 (689)
T ss_dssp CEEEEETTTCCEEEEEC-CCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTS-------EEEEEETTTCCEEEEEE
T ss_pred eEEEEECCCCceeEEEc-CCCCccccccccccCCCCccEEECCEEEEEccCC-------EEEEEECCCCCEeeeec
Confidence 4556666554 68754 2222110 1112367889999876554 8999999875 46543
No 163
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=42.22 E-value=2.5e+02 Score=27.36 Aligned_cols=148 Identities=13% Similarity=0.141 Sum_probs=73.2
Q ss_pred eEEEEEcCCCceEEccCCC---CeeeccC--CcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCC-cCC
Q 036467 175 EARVYSLASDKWKKINGGI---PYHISSR--AAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEY-KDS 246 (369)
Q Consensus 175 ~~~vys~~t~~W~~~~~~~---p~~~~~~--~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~-~~~ 246 (369)
.+..|+..++.++.. ... +..+... ..++. +|. .|++... .|..||..+.+|..+..... ...
T Consensus 236 Gl~~~~~~~~~~~~~-~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~-------Gl~~~~~~~~~~~~~~~~~~~~~~ 306 (795)
T 4a2l_A 236 GLFLINPKTKEIKNY-LHSPSNPKSISSNYIRSLAMDSQNR-LWIGTFN-------DLNIYHEGTDSFASYSSNPVENGS 306 (795)
T ss_dssp CEEEEETTTTEEEEE-CCCTTCTTSCSCSBEEEEEECTTSC-EEEEESS-------CEEEEETTTTEEEEECCCTTSTTS
T ss_pred CeEEEeCCCCeEEEe-ecCCCCccccCCCeEEEEEEcCCCC-EEEEeCC-------hhheEcCCCCeEEEEecCCCCCCC
Confidence 477788888888766 221 1111111 11333 344 5666544 58889999999988743221 100
Q ss_pred -CCCceeEEEEEC-CcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCC
Q 036467 247 -HDKCQIEVGVFR-GEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKN 324 (369)
Q Consensus 247 -~~~~~~~l~~~~-G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (369)
.......+.+.+ |.|.+.... ..+..+-.+. ..+......+...- ........+.. ..+ |
T Consensus 307 l~~~~i~~i~~D~~g~lWigt~~--~Gl~~~~~~~----~~~~~~~~~~~~~~-----l~~~~V~~i~~----d~~---g 368 (795)
T 4a2l_A 307 LSQRSVRSIFMDSQGGMWLGTYF--GGLNYYHPIR----NRFKNIRNIPYKNS-----LSDNVVSCIVE----DKD---K 368 (795)
T ss_dssp CSSSCEEEEEECTTSCEEEEESS--SCEEEECGGG----GSSEEECCCTTSSS-----CSCSSEEEEEE----CTT---S
T ss_pred CCCCcEEEEEEeCCcCEEEEECC--CCeEEeCCCc----ccceEEcCCCCCCC-----CCCCeeEEEEE----CCC---C
Confidence 111223444443 666654432 2333332221 22332211111000 01111222233 334 7
Q ss_pred eEEEEECCCeEEEEECCCCeEEEeE
Q 036467 325 FLLIEKGDGELILYDFENEIATDFK 349 (369)
Q Consensus 325 ~i~~~~~~~~~~~ydl~~~~~~~v~ 349 (369)
.|.+-..++.+..||.++++++.+.
T Consensus 369 ~lWiGt~~~Gl~~~~~~~~~~~~~~ 393 (795)
T 4a2l_A 369 NLWIGTNDGGLNLYNPITQRFTSYT 393 (795)
T ss_dssp CEEEEESSSCEEEECTTTCCEEEEC
T ss_pred CEEEEECCCCeEEEcCCCCcEEEEe
Confidence 8888877656999999999887764
No 164
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=41.68 E-value=1.6e+02 Score=24.99 Aligned_cols=76 Identities=12% Similarity=0.105 Sum_probs=40.6
Q ss_pred CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECC--CeE
Q 036467 258 RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGD--GEL 335 (369)
Q Consensus 258 ~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~ 335 (369)
+|+..++.......+.+|.++. .....+..+..... ......-+.+ ..+ |..+++...+ ..+
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~~----g~~~~~~~~~~~~~------~~~~~~~i~~----spd--g~~l~v~~~~~~~~i 284 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYAD----GMLDEIQTVAADTV------NAQGSGDIHL----SPD--GKYLYASNRLKADGV 284 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEET----TEEEEEEEEESCSS------CCCCEEEEEE----CTT--SSEEEEEECSSSCEE
T ss_pred CCCEEEEEcCCCCeEEEEEecC----CceEEeEEEecCCC------CCCCcccEEE----CCC--CCEEEEECCCCCCEE
Confidence 4765545444456899999873 23555555443221 0111223444 555 3446555543 457
Q ss_pred EEEEC--CCCeEEEeE
Q 036467 336 ILYDF--ENEIATDFK 349 (369)
Q Consensus 336 ~~ydl--~~~~~~~v~ 349 (369)
..|++ ++++++.+.
T Consensus 285 ~v~~~~~~~g~~~~~~ 300 (361)
T 3scy_A 285 AIFKVDETNGTLTKVG 300 (361)
T ss_dssp EEEEECTTTCCEEEEE
T ss_pred EEEEEcCCCCcEEEee
Confidence 77777 467766654
No 165
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=41.28 E-value=1.6e+02 Score=24.68 Aligned_cols=106 Identities=8% Similarity=0.057 Sum_probs=56.8
Q ss_pred CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCC
Q 036467 206 NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARE 284 (369)
Q Consensus 206 ~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~ 284 (369)
+|.+||...... .|..+|..++.-..+..+.. -..++.. +|+|++..... ....|+.++... .
T Consensus 42 ~g~lyv~d~~~~------~I~~~d~~g~~~~~~~~~~~-------p~gia~~~dG~l~vad~~~-~~~~v~~~d~~~--g 105 (306)
T 2p4o_A 42 DGTIFVTNHEVG------EIVSITPDGNQQIHATVEGK-------VSGLAFTSNGDLVATGWNA-DSIPVVSLVKSD--G 105 (306)
T ss_dssp TSCEEEEETTTT------EEEEECTTCCEEEEEECSSE-------EEEEEECTTSCEEEEEECT-TSCEEEEEECTT--S
T ss_pred CCCEEEEeCCCC------eEEEECCCCceEEEEeCCCC-------ceeEEEcCCCcEEEEeccC-CcceEEEEcCCC--C
Confidence 688999875442 89999998754443444321 1234443 58887776432 234566665311 2
Q ss_pred CeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEEC-CCeEEEEECCCCe
Q 036467 285 SWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKG-DGELILYDFENEI 344 (369)
Q Consensus 285 ~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~ydl~~~~ 344 (369)
..+.+..++... ....... +.+ +.+++... .+.++.+|+.+++
T Consensus 106 ~~~~~~~~~~~~----------~~~g~~~----~~~---~~~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 106 TVETLLTLPDAI----------FLNGITP----LSD---TQYLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp CEEEEEECTTCS----------CEEEEEE----SSS---SEEEEEETTTTEEEEEETTTTE
T ss_pred eEEEEEeCCCcc----------ccCcccc----cCC---CcEEEEECCCCeEEEEeCCCCc
Confidence 344443332111 0111223 333 56666553 4568888987653
No 166
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=39.34 E-value=1.7e+02 Score=24.56 Aligned_cols=28 Identities=7% Similarity=0.144 Sum_probs=20.9
Q ss_pred CceEEEEeecCCCCCceeEEEEEECCCcceeeeC
Q 036467 206 NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIH 239 (369)
Q Consensus 206 ~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~ 239 (369)
+|.++|...... .|..||..+.+++.+.
T Consensus 29 ~g~~l~v~~~~~------~i~~~~~~~~~~~~~~ 56 (322)
T 2fp8_A 29 TNKGFYTSVQDG------RVIKYEGPNSGFVDFA 56 (322)
T ss_dssp TCSSEEEECTTS------EEEEECCTTTCEEEEE
T ss_pred CCCEEEEEcCCC------eEEEECCCCCceEEEe
Confidence 578788775542 8999999988777664
No 167
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=39.29 E-value=1.7e+02 Score=24.52 Aligned_cols=104 Identities=13% Similarity=0.170 Sum_probs=49.6
Q ss_pred EEEEEECCCcceeee-CCCCCcCCCCCceeEEEEE-CCcEEEEEecC----CCeEEEEEeccCCCCCCeeEEEEEccccc
Q 036467 224 LVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVF-RGEFAMFHMWR----EDRVEIWTMKDFGARESWTRMFVIGRRAL 297 (369)
Q Consensus 224 ~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~-~G~L~~~~~~~----~~~~~iW~l~~~~~~~~W~~~~~i~~~~~ 297 (369)
.|..+|+.+.+.... ..+.. ...+.-. +|+..++.... ...+.+|.++.......+.....-.....
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~~-------v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~ 169 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWKSPVP-------VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKI 169 (369)
T ss_dssp EEEEEETTTCCEEEEEECSSC-------EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE
T ss_pred eEEEEECCCCcEEEEeecCCC-------eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeec
Confidence 789999987665333 32211 1122222 36655555432 26899999986432222222110000000
Q ss_pred ccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCC
Q 036467 298 INFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFEN 342 (369)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~ 342 (369)
. ..........+.+ ..+ +..++....++.+..||+++
T Consensus 170 ~--~~~~~~~~~~~~~----~~~--~~~l~~~~~dg~i~i~d~~~ 206 (369)
T 3zwl_B 170 I--THEGLDAATVAGW----STK--GKYIIAGHKDGKISKYDVSN 206 (369)
T ss_dssp E--CCTTCCCEEEEEE----CGG--GCEEEEEETTSEEEEEETTT
T ss_pred c--CCcCccceeEEEE----cCC--CCEEEEEcCCCEEEEEECCC
Confidence 0 0000001223333 334 24555555667799999998
No 168
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=39.21 E-value=2.5e+02 Score=26.39 Aligned_cols=218 Identities=10% Similarity=-0.018 Sum_probs=0.0
Q ss_pred EEeeecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCC
Q 036467 92 ISGSCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDS 171 (369)
Q Consensus 92 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 171 (369)
+..|.+|=..+......+++.+.|..+.+...+...+. ......+++++ ++.|-+++...
T Consensus 303 i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~--------~~~~~d~~~~p-dgr~~~va~~~----------- 362 (567)
T 1qks_A 303 ILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISA--------ERFLHDGGLDG-SHRYFITAANA----------- 362 (567)
T ss_dssp EEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEEC--------CSSEEEEEECT-TSCEEEEEEGG-----------
T ss_pred EEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeec--------cccccCceECC-CCCEEEEEeCC-----------
Q ss_pred CcceEEEEEcCCCceEEccCCC-CeeeccCCcEEE----CceEEEEeecCCCCCceeEEEEEECCCcc-----eeee-CC
Q 036467 172 YECEARVYSLASDKWKKINGGI-PYHISSRAAVCF----NECLIWKASRGLGRGMTVLVVAFDMNREE-----FKEI-HR 240 (369)
Q Consensus 172 ~~~~~~vys~~t~~W~~~~~~~-p~~~~~~~~v~~----~G~lyw~~~~~~~~~~~~~il~fD~~~e~-----~~~i-~~ 240 (369)
...+.|++..+++=... ... ........++.+ .|.+|.....+.+ .|..+|.+++. |..+ .+
T Consensus 363 -sn~V~ViD~~t~kl~~~-i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~-----~Vsvid~~~~~~~~~~~kvv~~i 435 (567)
T 1qks_A 363 -RNKLVVIDTKEGKLVAI-EDTGGQTPHPGRGANFVHPTFGPVWATSHMGDD-----SVALIGTDPEGHPDNAWKILDSF 435 (567)
T ss_dssp -GTEEEEEETTTTEEEEE-EECSSSSBCCTTCEEEEETTTEEEEEEEBSSSS-----EEEEEECCTTTCTTTBTSEEEEE
T ss_pred -CCeEEEEECCCCcEEEE-EeccCcCCCCccceeeECCCCCcEEEeCCCCCC-----eEEEecCCCCCCccccCEEEEEE
Q ss_pred CCCcCCCCCceeEEEEECCcEEEEEecCCC-----eEEEEEeccCCC---CCCeeEEEEEcccccccccccccceeeeeE
Q 036467 241 PEYKDSHDKCQIEVGVFRGEFAMFHMWRED-----RVEIWTMKDFGA---RESWTRMFVIGRRALINFDNYAFVHLKPVC 312 (369)
Q Consensus 241 P~~~~~~~~~~~~l~~~~G~L~~~~~~~~~-----~~~iW~l~~~~~---~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~ 312 (369)
+-.. .....+..---...|++-...... ++.|.-.+.... ...+..+..-....+. .......-+-
T Consensus 436 ~~~g--~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 509 (567)
T 1qks_A 436 PALG--GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGIT----EGQPRVVQGE 509 (567)
T ss_dssp ECSC--SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCC----SSCCEEEEEE
T ss_pred ecCC--CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccC----CCCcceEeee
Q ss_pred EeeeccCCCCCCeEEEEEC-----CCeEEEEECCCCeEEEe
Q 036467 313 EMMNLSNGNGKNFLLIEKG-----DGELILYDFENEIATDF 348 (369)
Q Consensus 313 ~~~~~~~~~~~~~i~~~~~-----~~~~~~ydl~~~~~~~v 348 (369)
+ ..+ |.++++... +..+.+||.+|.++++.
T Consensus 510 ~----~~~--G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~ 544 (567)
T 1qks_A 510 F----NKD--GTEVWFSVWNGKDQESALVVVDDKTLELKHV 544 (567)
T ss_dssp E----CTT--SSEEEEEEECCTTSCCEEEEEETTTTEEEEE
T ss_pred E----CCC--CCEEEEEeecCCCCCCcEEEEECCCceEEEE
No 169
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=38.81 E-value=1.5e+02 Score=23.76 Aligned_cols=139 Identities=14% Similarity=0.068 Sum_probs=70.7
Q ss_pred CCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCC-Cc
Q 036467 107 CNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLAS-DK 185 (369)
Q Consensus 107 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t-~~ 185 (369)
...+++++|+.+++...+..... ... .+.+.|. +.+-++ .. ...+.+++..+ +.
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~--------~v~--~~~~spd-g~~l~~--~~------------~~~i~~~d~~~~~~ 74 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPE--------LFE--APNWSPD-GKYLLL--NS------------EGLLYRLSLAGDPS 74 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESS--------CCE--EEEECTT-SSEEEE--EE------------TTEEEEEESSSCCS
T ss_pred cceeEEEEeCCCCceeeeccCCc--------ceE--eeEECCC-CCEEEE--Ec------------CCeEEEEeCCCCCC
Confidence 56789999999988876644321 122 3444443 233322 22 23788899888 77
Q ss_pred eEEccCCCCeeeccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE-CCcEEEE
Q 036467 186 WKKINGGIPYHISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF-RGEFAMF 264 (369)
Q Consensus 186 W~~~~~~~p~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~G~L~~~ 264 (369)
...+...............-+|........... ....|..+|+.+.....+..... ...+.-. +|+..++
T Consensus 75 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~spdg~~l~~ 145 (297)
T 2ojh_A 75 PEKVDTGFATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGTPRLMTKNLP-------SYWHGWSPDGKSFTY 145 (297)
T ss_dssp CEECCCTTCCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCCCEECCSSSS-------EEEEEECTTSSEEEE
T ss_pred ceEeccccccccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCCceEEeecCCC-------ccceEECCCCCEEEE
Confidence 766511111111111112335654444432110 12378888888776554432221 1122222 4665443
Q ss_pred EecCCCeEEEEEecc
Q 036467 265 HMWREDRVEIWTMKD 279 (369)
Q Consensus 265 ~~~~~~~~~iW~l~~ 279 (369)
.......+.||.++.
T Consensus 146 ~~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 146 CGIRDQVFDIYSMDI 160 (297)
T ss_dssp EEEETTEEEEEEEET
T ss_pred EECCCCceEEEEEEC
Confidence 333345789999874
No 170
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=38.51 E-value=1.8e+02 Score=24.59 Aligned_cols=95 Identities=7% Similarity=0.132 Sum_probs=49.3
Q ss_pred EEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccc
Q 036467 224 LVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDN 302 (369)
Q Consensus 224 ~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 302 (369)
.|..+|+.+.+.... +... ......+... +|++.+... ....+.+|-+.. ......+....
T Consensus 165 ~i~~wd~~~~~~~~~-~~~h----~~~v~~~~~~~~~~~l~sg~-~d~~v~~wd~~~------~~~~~~~~~h~------ 226 (340)
T 1got_B 165 TCALWDIETGQQTTT-FTGH----TGDVMSLSLAPDTRLFVSGA-CDASAKLWDVRE------GMCRQTFTGHE------ 226 (340)
T ss_dssp CEEEEETTTTEEEEE-ECCC----SSCEEEEEECTTSSEEEEEE-TTSCEEEEETTT------CSEEEEECCCS------
T ss_pred cEEEEECCCCcEEEE-EcCC----CCceEEEEECCCCCEEEEEe-CCCcEEEEECCC------CeeEEEEcCCc------
Confidence 788899987654332 1111 1112233333 466655554 455899998764 12223332111
Q ss_pred cccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCCeE
Q 036467 303 YAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENEIA 345 (369)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~~~ 345 (369)
.....+.+ ..+ |..++....++.+..||+++++.
T Consensus 227 ---~~v~~v~~----~p~--~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 227 ---SDINAICF----FPN--GNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp ---SCEEEEEE----CTT--SSEEEEEETTSCEEEEETTTTEE
T ss_pred ---CCEEEEEE----cCC--CCEEEEEcCCCcEEEEECCCCcE
Confidence 11333444 444 24444444566699999988764
No 171
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=37.46 E-value=2.8e+02 Score=26.45 Aligned_cols=134 Identities=7% Similarity=0.036 Sum_probs=68.4
Q ss_pred CceEEEEcCCcccee-eCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCce
Q 036467 108 NEDIFLFNPSTKKYK-KLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKW 186 (369)
Q Consensus 108 ~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W 186 (369)
..++...+.-+.... .+|... .....++.+|+..+ +|.+... ....+..++......
T Consensus 14 ~~~I~~i~l~~~~~~~~~~~~~---------~~~~~~l~~d~~~~--~lywtD~-----------~~~~I~r~~~~g~~~ 71 (628)
T 4a0p_A 14 RADIRRISLETNNNNVAIPLTG---------VKEASALDFDVTDN--RIYWTDI-----------SLKTISRAFMNGSAL 71 (628)
T ss_dssp TTEEEEEESSCTTCEEECCCCS---------CSCEEEEEEETTTT--EEEEEET-----------TTTEEEEEETTSCSC
T ss_pred CCcEEEEECCCCCcceEEEcCC---------CCceEEEEEECCCC--EEEEEEC-----------CCCeEEEEECCCCCc
Confidence 345555555554432 344332 12446788887544 3444332 234566666665555
Q ss_pred EEccCCCCeeeccCCcEEE---CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE--CCcE
Q 036467 187 KKINGGIPYHISSRAAVCF---NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF--RGEF 261 (369)
Q Consensus 187 ~~~~~~~p~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~--~G~L 261 (369)
..+ ... ......++.+ +|.|||..... ..|..+|++...-..+.. ... ..-..|+.. +|.|
T Consensus 72 ~~v-~~~--g~~~P~GlAvD~~~~~LY~tD~~~------~~I~v~~~dG~~~~~l~~-~~l----~~P~~iavdp~~G~l 137 (628)
T 4a0p_A 72 EHV-VEF--GLDYPEGMAVDWLGKNLYWADTGT------NRIEVSKLDGQHRQVLVW-KDL----DSPRALALDPAEGFM 137 (628)
T ss_dssp EEE-ECS--SCSCCCEEEEETTTTEEEEEETTT------TEEEEEETTSTTCEEEEC-SSC----CCEEEEEEETTTTEE
T ss_pred EEE-EeC--CCCCcceEEEEeCCCEEEEEECCC------CEEEEEecCCCcEEEEEe-CCC----CCcccEEEccCCCeE
Confidence 544 111 1111233443 69999987654 289999998754433321 111 122345555 5888
Q ss_pred EEEEecCCCeEEEEEecc
Q 036467 262 AMFHMWREDRVEIWTMKD 279 (369)
Q Consensus 262 ~~~~~~~~~~~~iW~l~~ 279 (369)
|+...... -.|+..+-
T Consensus 138 Y~tD~g~~--~~I~r~~~ 153 (628)
T 4a0p_A 138 YWTEWGGK--PKIDRAAM 153 (628)
T ss_dssp EEEECSSS--CEEEEEET
T ss_pred EEeCCCCC--CEEEEEeC
Confidence 88764222 24555543
No 172
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=37.31 E-value=2e+02 Score=24.64 Aligned_cols=136 Identities=8% Similarity=0.090 Sum_probs=65.8
Q ss_pred CCceEEEEcCCccceee-CCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCc
Q 036467 107 CNEDIFLFNPSTKKYKK-LPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDK 185 (369)
Q Consensus 107 ~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~ 185 (369)
.++.+.+||..+++... +.... . ... .+.+.+....-.++... ....+.+++.+++.
T Consensus 174 ~D~~v~lwd~~~~~~~~~~~~h~----~----~v~--~~~~~~~~~g~~l~sgs------------~Dg~v~~wd~~~~~ 231 (354)
T 2pbi_B 174 GDGTCALWDVESGQLLQSFHGHG----A----DVL--CLDLAPSETGNTFVSGG------------CDKKAMVWDMRSGQ 231 (354)
T ss_dssp TTSEEEEEETTTCCEEEEEECCS----S----CEE--EEEECCCSSCCEEEEEE------------TTSCEEEEETTTCC
T ss_pred CCCcEEEEeCCCCeEEEEEcCCC----C----CeE--EEEEEeCCCCCEEEEEe------------CCCeEEEEECCCCc
Confidence 56789999998876543 21110 0 122 23333332222333322 24568888888765
Q ss_pred eEEccCCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCceeEEEEE--CCc
Q 036467 186 WKKINGGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVF--RGE 260 (369)
Q Consensus 186 W~~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~--~G~ 260 (369)
....-......+ ..+.+ +|.....+..+. .|..+|+.+..-..+ ...... ....-+.+ +|+
T Consensus 232 ~~~~~~~h~~~v---~~v~~~p~~~~l~s~s~D~------~v~lwd~~~~~~~~~~~~~~~~-----~~~~~~~~s~~g~ 297 (354)
T 2pbi_B 232 CVQAFETHESDV---NSVRYYPSGDAFASGSDDA------TCRLYDLRADREVAIYSKESII-----FGASSVDFSLSGR 297 (354)
T ss_dssp EEEEECCCSSCE---EEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCTTCC-----SCEEEEEECTTSS
T ss_pred EEEEecCCCCCe---EEEEEeCCCCEEEEEeCCC------eEEEEECCCCcEEEEEcCCCcc-----cceeEEEEeCCCC
Confidence 432201111000 11222 455544444442 788899887643222 211111 12222222 477
Q ss_pred EEEEEecCCCeEEEEEecc
Q 036467 261 FAMFHMWREDRVEIWTMKD 279 (369)
Q Consensus 261 L~~~~~~~~~~~~iW~l~~ 279 (369)
+.+.... ...+.||-+..
T Consensus 298 ~l~~g~~-d~~i~vwd~~~ 315 (354)
T 2pbi_B 298 LLFAGYN-DYTINVWDVLK 315 (354)
T ss_dssp EEEEEET-TSCEEEEETTT
T ss_pred EEEEEEC-CCcEEEEECCC
Confidence 6666553 55899998754
No 173
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=37.25 E-value=16 Score=21.24 Aligned_cols=17 Identities=29% Similarity=0.517 Sum_probs=12.2
Q ss_pred CCcHHHHHHHhccCCcc
Q 036467 1 NLPTDIITDIFTRLPVK 17 (369)
Q Consensus 1 ~LP~Dll~eIL~rLp~~ 17 (369)
.||.|+.+|||+--...
T Consensus 23 ~LP~dIQ~Ells~~~~e 39 (48)
T 2kwv_A 23 QLPADIQEEILSGKSRE 39 (48)
T ss_dssp TSCHHHHHHHTTCCCSC
T ss_pred HCcHHHHHHHHhcchHH
Confidence 47888888888755433
No 174
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=37.14 E-value=1.8e+02 Score=24.15 Aligned_cols=27 Identities=15% Similarity=0.209 Sum_probs=15.6
Q ss_pred CeEEEEECCCeEEEEECCCCeEEEeEE
Q 036467 324 NFLLIEKGDGELILYDFENEIATDFKI 350 (369)
Q Consensus 324 ~~i~~~~~~~~~~~ydl~~~~~~~v~~ 350 (369)
+.|++...++.++.||..++.......
T Consensus 266 g~l~v~t~~ggl~~~d~~g~~~~~~~~ 292 (330)
T 3hxj_A 266 DTIYFGSYDGHLYAINPDGTEKWNFET 292 (330)
T ss_dssp SCEEEECTTCEEEEECTTSCEEEEEEC
T ss_pred CeEEEecCCCCEEEECCCCcEEEEEEc
Confidence 666666655567777764443444333
No 175
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=36.76 E-value=2.2e+02 Score=24.99 Aligned_cols=65 Identities=18% Similarity=0.384 Sum_probs=34.5
Q ss_pred CcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEE
Q 036467 259 GEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILY 338 (369)
Q Consensus 259 G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~y 338 (369)
|.+.+... ....+.+|-+.. -..+..+.... .....+.+ ..+ |..|+-...++.+..|
T Consensus 308 g~~l~sgs-~D~~i~iwd~~~------~~~~~~~~~h~---------~~v~~v~~----~~~--g~~l~s~s~D~~i~vw 365 (410)
T 1vyh_C 308 GPFLLSGS-RDKTIKMWDVST------GMCLMTLVGHD---------NWVRGVLF----HSG--GKFILSCADDKTLRVW 365 (410)
T ss_dssp CCEEEEEE-TTSEEEEEETTT------TEEEEEEECCS---------SCEEEEEE----CSS--SSCEEEEETTTEEEEE
T ss_pred CCEEEEEe-CCCeEEEEECCC------CceEEEEECCC---------CcEEEEEE----cCC--CCEEEEEeCCCeEEEE
Confidence 44444444 456899998864 12233332111 11233444 444 2445444556679999
Q ss_pred ECCCCeE
Q 036467 339 DFENEIA 345 (369)
Q Consensus 339 dl~~~~~ 345 (369)
|+++++.
T Consensus 366 d~~~~~~ 372 (410)
T 1vyh_C 366 DYKNKRC 372 (410)
T ss_dssp CCTTSCC
T ss_pred ECCCCce
Confidence 9988763
No 176
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=36.47 E-value=2.1e+02 Score=24.76 Aligned_cols=186 Identities=9% Similarity=0.050 Sum_probs=86.5
Q ss_pred CCceEEEEcCCcccee--eCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCC
Q 036467 107 CNEDIFLFNPSTKKYK--KLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASD 184 (369)
Q Consensus 107 ~~~~~~V~NP~T~~~~--~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~ 184 (369)
..+.+.|||....... .++.... . ......+.+.+..+.+-+.+ . ....+.+|+..++
T Consensus 55 ~~g~i~v~~~~~~~~~~~~~~~~~~-h------~~~V~~~~~~p~~~~~l~s~--s-----------~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 55 GGGAFLVLPLGKTGRVDKNVPLVCG-H------TAPVLDIAWCPHNDNVIASG--S-----------EDCTVMVWEIPDG 114 (402)
T ss_dssp SSCCEEEEETTCCEECCTTCCCBCC-C------SSCEEEEEECTTCTTEEEEE--E-----------TTSEEEEEECCTT
T ss_pred CCCEEEEEECccCCCCCCCCceEec-C------CCCEEEEEeCCCCCCEEEEE--e-----------CCCeEEEEEccCC
Confidence 5678888987443221 1222211 1 12344566666434433322 2 2456888988776
Q ss_pred ceEEccCCCCeeeccCCc----EEE--Cc-eEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCceeEEEE
Q 036467 185 KWKKINGGIPYHISSRAA----VCF--NE-CLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGV 256 (369)
Q Consensus 185 ~W~~~~~~~p~~~~~~~~----v~~--~G-~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~ 256 (369)
............+..+.. +.+ +| .+...+..+. .|..+|+.+.+.... ...... .....+.-
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~----~~v~~~~~ 184 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN------VILVWDVGTGAAVLTLGPDVHP----DTIYSVDW 184 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS------CEEEEETTTTEEEEEECTTTCC----SCEEEEEE
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC------EEEEEECCCCCccEEEecCCCC----CceEEEEE
Confidence 442110111111111111 222 34 3444444432 788999988765332 111111 11222232
Q ss_pred E-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEE-cccccccccccccceeeeeEEeeeccCCCCCCeEEEEE----
Q 036467 257 F-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVI-GRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEK---- 330 (369)
Q Consensus 257 ~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---- 330 (369)
. +|.+.+... ....+.||-+.. -..+..+ ....- ....-+.+ ..+ +.++...
T Consensus 185 ~~~~~~l~~~~-~d~~i~iwd~~~------~~~~~~~~~~~~~--------~~~~~~~~----~~~---~~~l~~g~~~~ 242 (402)
T 2aq5_A 185 SRDGALICTSC-RDKRVRVIEPRK------GTVVAEKDRPHEG--------TRPVHAVF----VSE---GKILTTGFSRM 242 (402)
T ss_dssp CTTSSCEEEEE-TTSEEEEEETTT------TEEEEEEECSSCS--------SSCCEEEE----CST---TEEEEEEECTT
T ss_pred CCCCCEEEEEe-cCCcEEEEeCCC------CceeeeeccCCCC--------CcceEEEE----cCC---CcEEEEeccCC
Confidence 2 466655554 355899998864 1233333 11110 01122333 444 5666654
Q ss_pred CCCeEEEEECCCCe
Q 036467 331 GDGELILYDFENEI 344 (369)
Q Consensus 331 ~~~~~~~ydl~~~~ 344 (369)
.++.+..||+++.+
T Consensus 243 ~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 243 SERQVALWDTKHLE 256 (402)
T ss_dssp CCEEEEEEETTBCS
T ss_pred CCceEEEEcCcccc
Confidence 34568888888754
No 177
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=35.93 E-value=3.1e+02 Score=26.48 Aligned_cols=182 Identities=10% Similarity=0.107 Sum_probs=83.5
Q ss_pred CCceEEEEcCCccceee-CCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCc
Q 036467 107 CNEDIFLFNPSTKKYKK-LPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDK 185 (369)
Q Consensus 107 ~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~ 185 (369)
..+.+.|||..+++... +.... .....+.+.+. +.+ ++... ....+.||+..++.
T Consensus 33 ~~g~v~iwd~~~~~~~~~~~~~~----------~~v~~~~~s~~-~~~--l~~~~-----------~dg~i~vw~~~~~~ 88 (814)
T 3mkq_A 33 YSGRVEIWNYETQVEVRSIQVTE----------TPVRAGKFIAR-KNW--IIVGS-----------DDFRIRVFNYNTGE 88 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEECCS----------SCEEEEEEEGG-GTE--EEEEE-----------TTSEEEEEETTTCC
T ss_pred CCCEEEEEECCCCceEEEEecCC----------CcEEEEEEeCC-CCE--EEEEe-----------CCCeEEEEECCCCc
Confidence 46788999988876543 22111 12224444442 222 22222 24578889988876
Q ss_pred eEEccCCCCeeeccCCcEE--ECceEEEEeecCCCCCceeEEEEEECCCc-ceeeeCCCCCcCCCCCceeEEEEE--CCc
Q 036467 186 WKKINGGIPYHISSRAAVC--FNECLIWKASRGLGRGMTVLVVAFDMNRE-EFKEIHRPEYKDSHDKCQIEVGVF--RGE 260 (369)
Q Consensus 186 W~~~~~~~p~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~~il~fD~~~e-~~~~i~~P~~~~~~~~~~~~l~~~--~G~ 260 (369)
....-......+ ..+. -+|.....+..+. .|..+|+.+. ..... +.... .....+.-. +|.
T Consensus 89 ~~~~~~~~~~~v---~~~~~s~~~~~l~~~~~dg------~i~vw~~~~~~~~~~~-~~~~~----~~v~~~~~~p~~~~ 154 (814)
T 3mkq_A 89 KVVDFEAHPDYI---RSIAVHPTKPYVLSGSDDL------TVKLWNWENNWALEQT-FEGHE----HFVMCVAFNPKDPS 154 (814)
T ss_dssp EEEEEECCSSCE---EEEEECSSSSEEEEEETTS------EEEEEEGGGTSEEEEE-EECCS----SCEEEEEEETTEEE
T ss_pred EEEEEecCCCCE---EEEEEeCCCCEEEEEcCCC------EEEEEECCCCceEEEE-EcCCC----CcEEEEEEEcCCCC
Confidence 543201111000 0111 1344333333332 7888998775 22222 11111 112233333 344
Q ss_pred EEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEEC
Q 036467 261 FAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDF 340 (369)
Q Consensus 261 L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl 340 (369)
+.+... ....+.+|-+... ...+ .+..... .....+.+ .+..+ +..++....++.+..||+
T Consensus 155 ~l~~~~-~dg~v~vwd~~~~--~~~~----~~~~~~~--------~~v~~~~~--~~~~~--~~~l~~~~~dg~i~~~d~ 215 (814)
T 3mkq_A 155 TFASGC-LDRTVKVWSLGQS--TPNF----TLTTGQE--------RGVNYVDY--YPLPD--KPYMITASDDLTIKIWDY 215 (814)
T ss_dssp EEEEEE-TTSEEEEEETTCS--SCSE----EEECCCT--------TCCCEEEE--CCSTT--CCEEEEECTTSEEEEEET
T ss_pred EEEEEe-CCCeEEEEECCCC--ccee----EEecCCC--------CCEEEEEE--EECCC--CCEEEEEeCCCEEEEEEC
Confidence 444444 4568999988642 1111 1111110 01222333 11113 244444455667999999
Q ss_pred CCCeE
Q 036467 341 ENEIA 345 (369)
Q Consensus 341 ~~~~~ 345 (369)
++++.
T Consensus 216 ~~~~~ 220 (814)
T 3mkq_A 216 QTKSC 220 (814)
T ss_dssp TTTEE
T ss_pred CCCcE
Confidence 88774
No 178
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=35.90 E-value=89 Score=22.83 Aligned_cols=44 Identities=2% Similarity=-0.125 Sum_probs=27.0
Q ss_pred ceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEee---eCCCCCeEEEEEEe
Q 036467 109 EDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGY---HQADDDYKVIRSIY 160 (369)
Q Consensus 109 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~---d~~~~~ykvv~~~~ 160 (369)
..++++||.++.|...-.... ....+.+.. |...+.|+|+...-
T Consensus 20 A~Vm~~D~~~~~W~p~~~g~l--------s~v~v~~~~~~~d~~~~~yrI~~~~l 66 (126)
T 2jp2_A 20 AVVMTRDDSSGGWFPQEGGGI--------SRVGVCKVMHPEGNGRSGFLIHGERQ 66 (126)
T ss_dssp EEEEEECTTSSSSEECSCCSC--------EEEEEECCBCTTCSSCBCEEEEEEES
T ss_pred EEEeeEcCCCCCEeeCCCCCc--------ccEEEEEecCCCCCCCCEEEEEEEEc
Confidence 578999999998865433210 112223333 55678899988763
No 179
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=35.87 E-value=1.1e+02 Score=28.05 Aligned_cols=26 Identities=19% Similarity=0.353 Sum_probs=22.8
Q ss_pred CCeEEEEECCCeEEEEECCCCeEEEe
Q 036467 323 KNFLLIEKGDGELILYDFENEIATDF 348 (369)
Q Consensus 323 ~~~i~~~~~~~~~~~ydl~~~~~~~v 348 (369)
-|.||++++.+-++.||++|++.-..
T Consensus 270 ygviyviTK~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 270 HDVVFLITKYGYIHLYDLETGTCIYM 295 (494)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCEEEEEecCceEEEEecccceeeee
Confidence 48999999988899999999997555
No 180
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=35.60 E-value=2e+02 Score=24.34 Aligned_cols=145 Identities=14% Similarity=0.164 Sum_probs=70.8
Q ss_pred cceEEEEEcCCCceEEccCCCCeeec-cCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCC
Q 036467 173 ECEARVYSLASDKWKKINGGIPYHIS-SRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHD 248 (369)
Q Consensus 173 ~~~~~vys~~t~~W~~~~~~~p~~~~-~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~ 248 (369)
...+.+++..++.|... ........ .-..+.+ +|.....+..+. .+..+|+.++.+..+ .+....
T Consensus 37 D~~i~iw~~~~~~~~~~-~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~------~v~iw~~~~~~~~~~~~~~~h~---- 105 (345)
T 3fm0_A 37 DRRIRIWGTEGDSWICK-SVLSEGHQRTVRKVAWSPCGNYLASASFDA------TTCIWKKNQDDFECVTTLEGHE---- 105 (345)
T ss_dssp TSCEEEEEEETTEEEEE-EEECSSCSSCEEEEEECTTSSEEEEEETTS------CEEEEEECCC-EEEEEEECCCS----
T ss_pred CCeEEEEEcCCCcceee-eeeccccCCcEEEEEECCCCCEEEEEECCC------cEEEEEccCCCeEEEEEccCCC----
Confidence 45688888888877533 10000000 0001222 455444444332 577788877766544 222221
Q ss_pred CceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEE
Q 036467 249 KCQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLL 327 (369)
Q Consensus 249 ~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 327 (369)
.....+.-. +|++.+.... ...+.||.++.. ..+..+..+..... ....+.+ ..+ +..++
T Consensus 106 ~~v~~v~~sp~~~~l~s~s~-D~~v~iwd~~~~---~~~~~~~~~~~h~~---------~v~~~~~----~p~--~~~l~ 166 (345)
T 3fm0_A 106 NEVKSVAWAPSGNLLATCSR-DKSVWVWEVDEE---DEYECVSVLNSHTQ---------DVKHVVW----HPS--QELLA 166 (345)
T ss_dssp SCEEEEEECTTSSEEEEEET-TSCEEEEEECTT---SCEEEEEEECCCCS---------CEEEEEE----CSS--SSCEE
T ss_pred CCceEEEEeCCCCEEEEEEC-CCeEEEEECCCC---CCeEEEEEecCcCC---------CeEEEEE----CCC--CCEEE
Confidence 112223322 4666555543 558999999752 33444444332111 1233344 434 24444
Q ss_pred EEECCCeEEEEECCCCeEEE
Q 036467 328 IEKGDGELILYDFENEIATD 347 (369)
Q Consensus 328 ~~~~~~~~~~ydl~~~~~~~ 347 (369)
....++.+..||.+++++..
T Consensus 167 s~s~d~~i~~w~~~~~~~~~ 186 (345)
T 3fm0_A 167 SASYDDTVKLYREEEDDWVC 186 (345)
T ss_dssp EEETTSCEEEEEEETTEEEE
T ss_pred EEeCCCcEEEEEecCCCEEE
Confidence 44555668888888877543
No 181
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=34.91 E-value=1.7e+02 Score=28.18 Aligned_cols=83 Identities=10% Similarity=0.070 Sum_probs=47.7
Q ss_pred EEECceEEEEeecCCCCCceeEEEEEEC-CCcceeeeCCCCCcCCCCCceeEEEEECCcEEEEEecCCCeEEEEEeccCC
Q 036467 203 VCFNECLIWKASRGLGRGMTVLVVAFDM-NREEFKEIHRPEYKDSHDKCQIEVGVFRGEFAMFHMWREDRVEIWTMKDFG 281 (369)
Q Consensus 203 v~~~G~lyw~~~~~~~~~~~~~il~fD~-~~e~~~~i~~P~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~ 281 (369)
+.-||.|.+-.............+.|-- ...+|..-...... ....+.++|++|+|.+...+......+..-.|
T Consensus 198 ~m~dGtLVfPv~~~~~~g~~~s~iiySdD~G~TW~ls~~~~~~---gc~EpsVvEwdG~Lmm~~R~~~g~R~Vy~S~D-- 272 (648)
T 1ms9_A 198 VASNGNLVYPVQVTNKKKQVFSKIFYSEDEGKTWKFGKGRSAF---GCSEPVALEWEGKLIINTRVDYRRRLVYESSD-- 272 (648)
T ss_dssp ECTTSCEEEEEEEEETTCCEEEEEEEESSTTSSCEECSCCCCT---TEEEEEEEEETTEEEEEEEETTSCCCEEEESS--
T ss_pred EecCCcEEEEEEEEcccccceeeEEEecCCCCCEEECCCCCCC---CccceEEEEECCEEEEEEEccCCcEEEEEecC--
Confidence 3347887775532211111233444433 45689887433221 13578899999999888777554444544444
Q ss_pred CCCCeeEEE
Q 036467 282 ARESWTRMF 290 (369)
Q Consensus 282 ~~~~W~~~~ 290 (369)
.+++|+...
T Consensus 273 ~G~TWte~~ 281 (648)
T 1ms9_A 273 MGNTWLEAV 281 (648)
T ss_dssp TTSSCEECT
T ss_pred CCccccccc
Confidence 557899753
No 182
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=34.62 E-value=1.8e+02 Score=23.50 Aligned_cols=159 Identities=6% Similarity=0.011 Sum_probs=77.2
Q ss_pred EeeecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCC
Q 036467 93 SGSCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSY 172 (369)
Q Consensus 93 ~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 172 (369)
++..+|.|.+.+. ...++.++++-.+....+-... .....++.+|+..+. +..... ...
T Consensus 86 ~d~~~~~lyv~d~-~~~~I~~~~~~g~~~~~~~~~~---------~~~P~~i~vd~~~g~--lyv~~~---------~~~ 144 (267)
T 1npe_A 86 LDHLGRTIFWTDS-QLDRIEVAKMDGTQRRVLFDTG---------LVNPRGIVTDPVRGN--LYWTDW---------NRD 144 (267)
T ss_dssp EETTTTEEEEEET-TTTEEEEEETTSCSCEEEECSS---------CSSEEEEEEETTTTE--EEEEEC---------CSS
T ss_pred EEecCCeEEEEEC-CCCEEEEEEcCCCCEEEEEECC---------CCCccEEEEeeCCCE--EEEEEC---------CCC
Confidence 3445677766653 4567888887654333321111 112236677764332 212111 111
Q ss_pred cceEEEEEcCCCceEEccCCCCeeeccCCcEEE---CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCC
Q 036467 173 ECEARVYSLASDKWKKINGGIPYHISSRAAVCF---NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDK 249 (369)
Q Consensus 173 ~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~ 249 (369)
...+.+++.....-+.+ .... .....++.+ ++.+||...... .|..||+++..-..+- + .. .
T Consensus 145 ~~~I~~~~~dg~~~~~~-~~~~--~~~P~gia~d~~~~~lyv~d~~~~------~I~~~~~~g~~~~~~~-~-~~--~-- 209 (267)
T 1npe_A 145 NPKIETSHMDGTNRRIL-AQDN--LGLPNGLTFDAFSSQLCWVDAGTH------RAECLNPAQPGRRKVL-E-GL--Q-- 209 (267)
T ss_dssp SCEEEEEETTSCCCEEE-ECTT--CSCEEEEEEETTTTEEEEEETTTT------EEEEEETTEEEEEEEE-E-CC--C--
T ss_pred CcEEEEEecCCCCcEEE-EECC--CCCCcEEEEcCCCCEEEEEECCCC------EEEEEecCCCceEEEe-c-CC--C--
Confidence 34566666654322222 1111 111123333 478999886652 8999999865433321 1 11 0
Q ss_pred ceeEEEEECCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcc
Q 036467 250 CQIEVGVFRGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGR 294 (369)
Q Consensus 250 ~~~~l~~~~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~ 294 (369)
.-..+...+|.|++.... .. .|++++. .....+.+|+.
T Consensus 210 ~P~gi~~d~~~lyva~~~-~~--~v~~~d~----~~g~~~~~i~~ 247 (267)
T 1npe_A 210 YPFAVTSYGKNLYYTDWK-TN--SVIAMDL----AISKEMDTFHP 247 (267)
T ss_dssp SEEEEEEETTEEEEEETT-TT--EEEEEET----TTTEEEEEECC
T ss_pred CceEEEEeCCEEEEEECC-CC--eEEEEeC----CCCCceEEEcc
Confidence 112345557888886643 23 3566664 23455666654
No 183
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=34.54 E-value=91 Score=24.09 Aligned_cols=40 Identities=18% Similarity=0.408 Sum_probs=28.8
Q ss_pred ceEEEEcCCcc-ceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEE
Q 036467 109 EDIFLFNPSTK-KYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSI 159 (369)
Q Consensus 109 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 159 (369)
..++++||.|+ .|+..-.. . ..+.+.+|...+.|+|+.+.
T Consensus 16 A~Vm~~D~~tk~~WvP~g~~----------~-~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 16 AHVFQIDPNTKKNWVPTSKH----------A-VTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEEECTTSSCCSEESCSS----------C-EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCCCceeecCCC----------C-eEEEEEEcCCCCEEEEEEcc
Confidence 57899999997 89754332 1 24456688888889998854
No 184
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=34.02 E-value=2.1e+02 Score=24.03 Aligned_cols=95 Identities=13% Similarity=0.199 Sum_probs=49.8
Q ss_pred EEEEEECCCcceeee-CCCCCcCCCCCceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEccccccccc
Q 036467 224 LVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFD 301 (369)
Q Consensus 224 ~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 301 (369)
.|..+|+.+.+-... ..... ....+.-. +|++.+.... ...+.||-+.. -..+..+.....
T Consensus 145 ~v~i~~~~~~~~~~~~~~~~~------~v~~~~~spdg~~lasg~~-dg~i~iwd~~~------~~~~~~~~~h~~---- 207 (321)
T 3ow8_A 145 KVNIFGVESGKKEYSLDTRGK------FILSIAYSPDGKYLASGAI-DGIINIFDIAT------GKLLHTLEGHAM---- 207 (321)
T ss_dssp EEEEEETTTCSEEEEEECSSS------CEEEEEECTTSSEEEEEET-TSCEEEEETTT------TEEEEEECCCSS----
T ss_pred cEEEEEcCCCceeEEecCCCc------eEEEEEECCCCCEEEEEcC-CCeEEEEECCC------CcEEEEEcccCC----
Confidence 788888877654322 11111 11222322 4666555543 45899998764 123344332111
Q ss_pred ccccceeeeeEEeeeccCCCCCCeEEEEE-CCCeEEEEECCCCeEEE
Q 036467 302 NYAFVHLKPVCEMMNLSNGNGKNFLLIEK-GDGELILYDFENEIATD 347 (369)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~ydl~~~~~~~ 347 (369)
....+.+ ..+ +.+++.. .++.+..||+++++...
T Consensus 208 -----~v~~l~~----spd---~~~l~s~s~dg~i~iwd~~~~~~~~ 242 (321)
T 3ow8_A 208 -----PIRSLTF----SPD---SQLLVTASDDGYIKIYDVQHANLAG 242 (321)
T ss_dssp -----CCCEEEE----CTT---SCEEEEECTTSCEEEEETTTCCEEE
T ss_pred -----ceeEEEE----cCC---CCEEEEEcCCCeEEEEECCCcceeE
Confidence 1334455 555 4555544 45569999998877543
No 185
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=33.88 E-value=2.1e+02 Score=24.08 Aligned_cols=23 Identities=26% Similarity=0.372 Sum_probs=16.1
Q ss_pred CeEEEE-ECCCeEEEEECCCCeEE
Q 036467 324 NFLLIE-KGDGELILYDFENEIAT 346 (369)
Q Consensus 324 ~~i~~~-~~~~~~~~ydl~~~~~~ 346 (369)
+.++.. ..++.+..||+++++..
T Consensus 182 g~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 182 SLLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp SCEEEEECTTSCEEEEESSCTTSC
T ss_pred CCEEEEEcCCCEEEEEECCCCCCC
Confidence 556555 44566999999988754
No 186
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=33.50 E-value=1.9e+02 Score=23.40 Aligned_cols=196 Identities=11% Similarity=0.022 Sum_probs=97.2
Q ss_pred EEeeecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCC
Q 036467 92 ISGSCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDS 171 (369)
Q Consensus 92 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 171 (369)
+....+|-+.+... ....+.++||. ++...++.+.. .....++..|+.. . +.. .. .
T Consensus 25 i~~d~~g~l~v~~~-~~~~v~~~~~~-~~~~~~~~~~~--------~~~~~~i~~~~~g-~--l~v-~~----------~ 80 (300)
T 2qc5_A 25 ITSSEDGKVWFTQH-KANKISSLDQS-GRIKEFEVPTP--------DAKVMCLIVSSLG-D--IWF-TE----------N 80 (300)
T ss_dssp EEECTTSCEEEEET-TTTEEEEECTT-SCEEEEECSST--------TCCEEEEEECTTS-C--EEE-EE----------T
T ss_pred eeECCCCCEEEEcC-CCCeEEEECCC-CceEEEECCCC--------CCcceeEEECCCC-C--EEE-Ee----------c
Confidence 44445676655542 35789999998 66665443211 1123355555432 1 222 11 0
Q ss_pred CcceEEEEEcCCCceEEccCCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCC
Q 036467 172 YECEARVYSLASDKWKKINGGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDK 249 (369)
Q Consensus 172 ~~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~ 249 (369)
....+.+|+.. +.++.. .. +........+.+ +|.+|+...... .|..+|.. .+...+.+|... .
T Consensus 81 ~~~~v~~~d~~-g~~~~~-~~-~~~~~~~~~i~~~~~g~l~v~~~~~~------~i~~~~~~-g~~~~~~~~~~~----~ 146 (300)
T 2qc5_A 81 GANKIGKLSKK-GGFTEY-PL-PQPDSGPYGITEGLNGDIWFTQLNGD------RIGKLTAD-GTIYEYDLPNKG----S 146 (300)
T ss_dssp TTTEEEEECTT-SCEEEE-EC-SSTTCCEEEEEECSTTCEEEEETTTT------EEEEECTT-SCEEEEECSSTT----C
T ss_pred CCCeEEEECCC-CCeEEe-cC-CCCCCCCccceECCCCCEEEEccCCC------eEEEECCC-CCEEEccCCCCC----C
Confidence 13456677766 666544 11 100011112333 588777654332 89999998 676666555422 1
Q ss_pred ceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEE
Q 036467 250 CQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLI 328 (369)
Q Consensus 250 ~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 328 (369)
.-..+... +|+|++.... .. .|++++.. ..... +..... ...|.+++. ..+ |.+++
T Consensus 147 ~~~~i~~d~~g~l~v~~~~-~~--~i~~~~~~---g~~~~---~~~~~~---------~~~~~~i~~--d~~---g~l~v 203 (300)
T 2qc5_A 147 YPAFITLGSDNALWFTENQ-NN--SIGRITNT---GKLEE---YPLPTN---------AAAPVGITS--GND---GALWF 203 (300)
T ss_dssp CEEEEEECTTSSEEEEETT-TT--EEEEECTT---CCEEE---EECSST---------TCCEEEEEE--CTT---SSEEE
T ss_pred CceeEEECCCCCEEEEecC-CC--eEEEECCC---CcEEE---eeCCCC---------CCCcceEEE--CCC---CCEEE
Confidence 12234443 4887776542 22 35566541 22332 111110 123333311 444 67887
Q ss_pred EEC-CCeEEEEECCCCeEEEeE
Q 036467 329 EKG-DGELILYDFENEIATDFK 349 (369)
Q Consensus 329 ~~~-~~~~~~ydl~~~~~~~v~ 349 (369)
... ...+..||+ ++++..+.
T Consensus 204 ~~~~~~~i~~~~~-~g~~~~~~ 224 (300)
T 2qc5_A 204 VEIMGNKIGRITT-TGEISEYD 224 (300)
T ss_dssp EETTTTEEEEECT-TCCEEEEE
T ss_pred EccCCCEEEEEcC-CCcEEEEE
Confidence 764 346999998 55655543
No 187
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=32.68 E-value=2.1e+02 Score=23.68 Aligned_cols=107 Identities=7% Similarity=-0.091 Sum_probs=55.3
Q ss_pred ceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcCCCCCceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCC
Q 036467 207 ECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKDSHDKCQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARE 284 (369)
Q Consensus 207 G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~ 284 (369)
+.+|+....+. .|..+|+.+++.... ..+.. ...++.. +|+..++.......+.+|-++. . +
T Consensus 10 ~~~~v~~~~~~------~v~~~d~~~~~~~~~~~~~~~-------~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~--~-~ 73 (331)
T 3u4y_A 10 NFGIVVEQHLR------RISFFSTDTLEILNQITLGYD-------FVDTAITSDCSNVVVTSDFCQTLVQIETQL--E-P 73 (331)
T ss_dssp CEEEEEEGGGT------EEEEEETTTCCEEEEEECCCC-------EEEEEECSSSCEEEEEESTTCEEEEEECSS--S-S
T ss_pred CEEEEEecCCC------eEEEEeCcccceeeeEEccCC-------cceEEEcCCCCEEEEEeCCCCeEEEEECCC--C-c
Confidence 45566655442 899999998877544 44321 2244443 4764444443344666665543 1 1
Q ss_pred CeeEEEEEcccccccccccccceeee-eEEeeeccCCCCCCeEEEEECCC----eEEEEECCCCeEEEe
Q 036467 285 SWTRMFVIGRRALINFDNYAFVHLKP-VCEMMNLSNGNGKNFLLIEKGDG----ELILYDFENEIATDF 348 (369)
Q Consensus 285 ~W~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~----~~~~ydl~~~~~~~v 348 (369)
- ....+..... ..- +.+ ..+ |..++ ...+. .+..||+++++....
T Consensus 74 -~-~~~~~~~~~~----------~~~~~~~----s~d--g~~l~-~~~~~~~~~~i~v~d~~~~~~~~~ 123 (331)
T 3u4y_A 74 -P-KVVAIQEGQS----------SMADVDI----TPD--DQFAV-TVTGLNHPFNMQSYSFLKNKFIST 123 (331)
T ss_dssp -C-EEEEEEECSS----------CCCCEEE----CTT--SSEEE-ECCCSSSSCEEEEEETTTTEEEEE
T ss_pred -e-eEEecccCCC----------CccceEE----CCC--CCEEE-EecCCCCcccEEEEECCCCCeEEE
Confidence 1 1222222111 112 344 444 34455 44333 799999998876443
No 188
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=32.61 E-value=3.3e+02 Score=25.93 Aligned_cols=142 Identities=11% Similarity=0.062 Sum_probs=71.0
Q ss_pred eEEEEcCCc-cceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCceEE
Q 036467 110 DIFLFNPST-KKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKWKK 188 (369)
Q Consensus 110 ~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W~~ 188 (369)
+++++|..+ ++...+..... . ......+.+ | .+.+-++.... .......+.+++..++..+.
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~-~------~~~~~~~~~-p-Dg~~l~~~~~~--------~~~~~~~i~~~d~~~g~~~~ 326 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKE-Q------DIYLARVNW-R-DPQHLSFQRQS--------RDQKKLDLVEVTLASNQQRV 326 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSC-S------SEEEEEEEE-E-ETTEEEEEEEE--------TTSSEEEEEEEETTTCCEEE
T ss_pred EEEEEECCCCCceEEecCCCC-c------ceEEEEEEe-C-CCCEEEEEEec--------ccCCeEEEEEEECCCCceEE
Confidence 788999998 88766543311 1 122233444 3 23444444332 22345678888888887765
Q ss_pred ccCCCCeee---ccCCcEEECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEE-EE-CCcEEE
Q 036467 189 INGGIPYHI---SSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVG-VF-RGEFAM 263 (369)
Q Consensus 189 ~~~~~p~~~---~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~-~~-~G~L~~ 263 (369)
+........ .......-||.+++....+. ...|..+|+.+. ...+ .... .....+. .. +|+..+
T Consensus 327 ~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g----~~~l~~~~~~~~-~~~l--~~~~----~~v~~~~~~s~dg~~l~ 395 (741)
T 2ecf_A 327 LAHETSPTWVPLHNSLRFLDDGSILWSSERTG----FQHLYRIDSKGK-AAAL--THGN----WSVDELLAVDEKAGLAY 395 (741)
T ss_dssp EEEEECSSCCCCCSCCEECTTSCEEEEECTTS----SCEEEEECSSSC-EEES--CCSS----SCEEEEEEEETTTTEEE
T ss_pred EEEcCCCCcCCcCCceEECCCCeEEEEecCCC----ccEEEEEcCCCC-eeee--eecc----eEEEeEeEEeCCCCEEE
Confidence 511100000 01111334788777765442 237788887666 4333 2221 1112222 22 565444
Q ss_pred EEecCC--CeEEEEEecc
Q 036467 264 FHMWRE--DRVEIWTMKD 279 (369)
Q Consensus 264 ~~~~~~--~~~~iW~l~~ 279 (369)
+..... ..+.||.++.
T Consensus 396 ~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 396 FRAGIESARESQIYAVPL 413 (741)
T ss_dssp EEECSSCTTCBEEEEEET
T ss_pred EEEeCCCCceEEEEEEEc
Confidence 433333 3788999874
No 189
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=32.14 E-value=2.2e+02 Score=24.24 Aligned_cols=63 Identities=11% Similarity=-0.028 Sum_probs=33.9
Q ss_pred EEE--CceEEEEeecCCCCCceeEEEEEECCCcc-eeeeCCCCCcCCCCCceeEEEEE--CCcEEEEEe
Q 036467 203 VCF--NECLIWKASRGLGRGMTVLVVAFDMNREE-FKEIHRPEYKDSHDKCQIEVGVF--RGEFAMFHM 266 (369)
Q Consensus 203 v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~-~~~i~~P~~~~~~~~~~~~l~~~--~G~L~~~~~ 266 (369)
+.+ +|.+||+..... ......|+.||+.+.+ ...+.+|.........-..++.. +|.+++...
T Consensus 72 v~~d~~g~L~v~D~g~~-~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~ 139 (343)
T 2qe8_A 72 IKSDGNGIVWMLDNGNQ-SKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDP 139 (343)
T ss_dssp EEECSSSEEEEEECHHH-HTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEEC
T ss_pred EEEcCCCcEEEEcCCCC-cCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcC
Confidence 444 488999875410 0001289999999877 45567764321111112344555 356666543
No 190
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.11 E-value=47 Score=21.62 Aligned_cols=22 Identities=14% Similarity=0.433 Sum_probs=17.5
Q ss_pred CeEEEEECCCeEEEEECCCCeE
Q 036467 324 NFLLIEKGDGELILYDFENEIA 345 (369)
Q Consensus 324 ~~i~~~~~~~~~~~ydl~~~~~ 345 (369)
.-......++++|+||..|++-
T Consensus 21 ~W~~v~T~dGR~fyyN~~Tk~S 42 (73)
T 2dk7_A 21 PWCVVWTGDERVFFYNPTTRLS 42 (73)
T ss_dssp SCEEEEESSSCEEEEETTTTEE
T ss_pred CcEEEECCCCCEEEecCcccce
Confidence 4566667778899999999974
No 191
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=32.07 E-value=3.1e+02 Score=25.39 Aligned_cols=196 Identities=13% Similarity=0.062 Sum_probs=96.8
Q ss_pred eecccEEEeeccCCceEEEEcCCccceee-CCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCc
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKK-LPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYE 173 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (369)
+-+|.++.... ..+.+.|+|+.|++... ++... . ..++.++|. +.|-.+. . ..
T Consensus 146 ~p~~~~~vs~~-~d~~V~v~D~~t~~~~~~i~~g~---------~--~~~v~~spd-g~~l~v~--~-----------~d 199 (543)
T 1nir_A 146 DLPNLFSVTLR-DAGQIALVDGDSKKIVKVIDTGY---------A--VHISRMSAS-GRYLLVI--G-----------RD 199 (543)
T ss_dssp CGGGEEEEEEG-GGTEEEEEETTTCCEEEEEECST---------T--EEEEEECTT-SCEEEEE--E-----------TT
T ss_pred CCCCEEEEEEc-CCCeEEEEECCCceEEEEEecCc---------c--cceEEECCC-CCEEEEE--C-----------CC
Confidence 34666665553 56789999999987653 33111 1 224555553 2332222 2 12
Q ss_pred ceEEEEEc--CCCce-EEccCCCCeeeccCCcEEE------Cce-EEEEeecCCCCCceeEEEEEECCCccee-eeCCCC
Q 036467 174 CEARVYSL--ASDKW-KKINGGIPYHISSRAAVCF------NEC-LIWKASRGLGRGMTVLVVAFDMNREEFK-EIHRPE 242 (369)
Q Consensus 174 ~~~~vys~--~t~~W-~~~~~~~p~~~~~~~~v~~------~G~-lyw~~~~~~~~~~~~~il~fD~~~e~~~-~i~~P~ 242 (369)
..+.+|+. .++.- +.+ +..... ..+.+ +|. +|.....+ ..|..+|..+.+.. .++.+.
T Consensus 200 ~~V~v~D~~~~t~~~~~~i----~~g~~p-~~va~sp~~~~dg~~l~v~~~~~------~~v~v~D~~t~~~~~~i~~~g 268 (543)
T 1nir_A 200 ARIDMIDLWAKEPTKVAEI----KIGIEA-RSVESSKFKGYEDRYTIAGAYWP------PQFAIMDGETLEPKQIVSTRG 268 (543)
T ss_dssp SEEEEEETTSSSCEEEEEE----ECCSEE-EEEEECCSTTCTTTEEEEEEEES------SEEEEEETTTCCEEEEEECCE
T ss_pred CeEEEEECcCCCCcEEEEE----ecCCCc-ceEEeCCCcCCCCCEEEEEEccC------CeEEEEeccccccceeecccC
Confidence 67888888 55432 122 111000 11222 565 44444333 27889998876543 334432
Q ss_pred C-cCC---CCC-ceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeee
Q 036467 243 Y-KDS---HDK-CQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMN 316 (369)
Q Consensus 243 ~-~~~---~~~-~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 316 (369)
. ... +.. ....+... +|...++.......+.+|-..+.. =.++.+++.... ..-+.+
T Consensus 269 ~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~----~l~~~~i~~~~~----------~~~~~~--- 331 (543)
T 1nir_A 269 MTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID----NLTVTSIGAAPF----------LHDGGW--- 331 (543)
T ss_dssp ECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSS----SCEEEEEECCSS----------CCCEEE---
T ss_pred cccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCC----cceeEEeccCcC----------ccCceE---
Confidence 1 000 001 11233333 366666666555676666665421 112334442221 233555
Q ss_pred ccCCCCCCe-EEEEEC-CCeEEEEECCCCeEEEe
Q 036467 317 LSNGNGKNF-LLIEKG-DGELILYDFENEIATDF 348 (369)
Q Consensus 317 ~~~~~~~~~-i~~~~~-~~~~~~ydl~~~~~~~v 348 (369)
..+ |+ ++.... +..+.++|++++++...
T Consensus 332 -spd---g~~l~va~~~~~~v~v~D~~tg~l~~~ 361 (543)
T 1nir_A 332 -DSS---HRYFMTAANNSNKVAVIDSKDRRLSAL 361 (543)
T ss_dssp -CTT---SCEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred -CCC---CCEEEEEecCCCeEEEEECCCCeEEEe
Confidence 555 45 444432 45688999999986543
No 192
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=31.67 E-value=3.5e+02 Score=25.92 Aligned_cols=56 Identities=13% Similarity=0.167 Sum_probs=33.3
Q ss_pred ceEEEEEcCCC--ceEEccCCCCee--------eccCCcEEECceEEEEeecCCCCCceeEEEEEECCCc--ceee
Q 036467 174 CEARVYSLASD--KWKKINGGIPYH--------ISSRAAVCFNECLIWKASRGLGRGMTVLVVAFDMNRE--EFKE 237 (369)
Q Consensus 174 ~~~~vys~~t~--~W~~~~~~~p~~--------~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e--~~~~ 237 (369)
..+..++..|+ .|+.- ...+.. ......++.+|.+|.....+ .+.++|..+. .|+.
T Consensus 87 ~~v~AlD~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg-------~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 87 SVVHAIDTRTGNRIWTYD-PQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDG-------RLIALDAATGKEVWHQ 154 (677)
T ss_dssp GCEEEEETTTTEEEEEEC-CCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTS-------EEEEEETTTCCEEEEE
T ss_pred CeEEEEECCCCcEEEEEc-CCCCccccccccccCCCCCceEECCEEEEEcCCC-------EEEEEECCCCCEEeee
Confidence 34556666665 68765 222211 11122367889999876554 8999999765 4544
No 193
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=30.82 E-value=2.2e+02 Score=23.32 Aligned_cols=200 Identities=11% Similarity=0.063 Sum_probs=89.3
Q ss_pred CCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCCce
Q 036467 107 CNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASDKW 186 (369)
Q Consensus 107 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~~W 186 (369)
....++++||.+++...+..+.... . .....++.+|+..+. +.. .. ....+.+|+.. +..
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~~~~~~-~----~~~~~~i~~~~~~g~--l~v-~~-----------~~~~l~~~d~~-g~~ 103 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICKPEVNG-Y----GGIPAGCQCDRDANQ--LFV-AD-----------MRLGLLVVQTD-GTF 103 (314)
T ss_dssp ECCEEEEECTTTCCEEEEECCEETT-E----ECCEEEEEECSSSSE--EEE-EE-----------TTTEEEEEETT-SCE
T ss_pred CCCEEEEEeCCCCcEEEEEecccCC-C----CCCCceEEEecCCCc--EEE-EE-----------CCCCEEEEeCC-CCE
Confidence 3567999999998877654311000 0 112345556654222 222 22 01257778877 665
Q ss_pred EEc-cCCCC-eeeccCCcEEE--CceEEEEeecCC---------CCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeE
Q 036467 187 KKI-NGGIP-YHISSRAAVCF--NECLIWKASRGL---------GRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIE 253 (369)
Q Consensus 187 ~~~-~~~~p-~~~~~~~~v~~--~G~lyw~~~~~~---------~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~ 253 (369)
+.+ ..... ........+.+ +|.+|+...... .......|..+|.. +++..+.- .. . ....
T Consensus 104 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~--~--~~~~ 176 (314)
T 1pjx_A 104 EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT--AF--Q--FPNG 176 (314)
T ss_dssp EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE--EE--S--SEEE
T ss_pred EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc--CC--C--Ccce
Confidence 543 12111 11111122333 688876654320 00011378889887 55544311 11 0 0112
Q ss_pred EEEE-----CC-cEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEE
Q 036467 254 VGVF-----RG-EFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLL 327 (369)
Q Consensus 254 l~~~-----~G-~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 327 (369)
++.. +| .|++... ....+.+|-++.. ........+..... .......-+.+ ..+ |.++
T Consensus 177 i~~~~~~d~dg~~l~v~~~-~~~~i~~~~~~~~---g~~~~~~~~~~~~~-----~~~~~p~~i~~----d~~---G~l~ 240 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAET-PTKKLWSYDIKGP---AKIENKKVWGHIPG-----THEGGADGMDF----DED---NNLL 240 (314)
T ss_dssp EEEEECTTSCEEEEEEEET-TTTEEEEEEEEET---TEEEEEEEEEECCC-----CSSCEEEEEEE----BTT---CCEE
T ss_pred EEEecccCCCCCEEEEEEC-CCCeEEEEECCCC---CccccceEEEECCC-----CCCCCCCceEE----CCC---CCEE
Confidence 2333 35 3555443 3346666665521 12322211111000 00001222333 445 6787
Q ss_pred EEE-CCCeEEEEECCCCe-EEEeE
Q 036467 328 IEK-GDGELILYDFENEI-ATDFK 349 (369)
Q Consensus 328 ~~~-~~~~~~~ydl~~~~-~~~v~ 349 (369)
+.. .+..+..||+++++ ...+.
T Consensus 241 v~~~~~~~i~~~d~~~g~~~~~~~ 264 (314)
T 1pjx_A 241 VANWGSSHIEVFGPDGGQPKMRIR 264 (314)
T ss_dssp EEEETTTEEEEECTTCBSCSEEEE
T ss_pred EEEcCCCEEEEEcCCCCcEeEEEe
Confidence 765 45579999999554 34443
No 194
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=30.20 E-value=2.2e+02 Score=23.18 Aligned_cols=27 Identities=19% Similarity=0.476 Sum_probs=20.2
Q ss_pred eecccEEEeeccCCceEEEEcCCccceeeC
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKKL 124 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~L 124 (369)
|.+|+|... .++++.|||..|++...+
T Consensus 34 S~~~~lAvg---~D~tV~iWd~~tg~~~~~ 60 (318)
T 4ggc_A 34 SSGNVLAVA---LDNSVYLWSASSGDILQL 60 (318)
T ss_dssp CTTSEEEEE---ETTEEEEEETTTCCEEEE
T ss_pred CCCCEEEEE---eCCEEEEEECCCCCEEEE
Confidence 667766544 367899999999987654
No 195
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=29.84 E-value=2.2e+02 Score=23.06 Aligned_cols=23 Identities=17% Similarity=0.209 Sum_probs=16.6
Q ss_pred CeEEEEECCCeEEEEECCCCeEE
Q 036467 324 NFLLIEKGDGELILYDFENEIAT 346 (369)
Q Consensus 324 ~~i~~~~~~~~~~~ydl~~~~~~ 346 (369)
+.++....++.+..||+++++..
T Consensus 196 ~~~~~~~~dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 196 GHFISCSNDGLIKLVDMHTGDVL 218 (313)
T ss_dssp TEEEEEETTSEEEEEETTTCCEE
T ss_pred CeEEEccCCCeEEEEECCchhhh
Confidence 55665666677999999877643
No 196
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=29.12 E-value=2.5e+02 Score=23.29 Aligned_cols=28 Identities=7% Similarity=0.214 Sum_probs=20.6
Q ss_pred CeEEEEECCCeEEEEECCCCeEEEeEEec
Q 036467 324 NFLLIEKGDGELILYDFENEIATDFKIQR 352 (369)
Q Consensus 324 ~~i~~~~~~~~~~~ydl~~~~~~~v~~~~ 352 (369)
|.|++.. ...+..||++++....+....
T Consensus 250 G~lwv~~-~~gv~~~~~~g~~~~~~~~~~ 277 (305)
T 3dr2_A 250 GWLWSSS-GTGVCVFDSDGQLLGHIPTPG 277 (305)
T ss_dssp SCEEECC-SSEEEEECTTSCEEEEEECSS
T ss_pred CCEEEec-CCcEEEECCCCCEEEEEECCC
Confidence 6677665 445999999888888776543
No 197
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=28.91 E-value=3.4e+02 Score=24.84 Aligned_cols=134 Identities=10% Similarity=0.028 Sum_probs=65.2
Q ss_pred cceEEEEEcCCCceE--EccCCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCC-CcCCC
Q 036467 173 ECEARVYSLASDKWK--KINGGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPE-YKDSH 247 (369)
Q Consensus 173 ~~~~~vys~~t~~W~--~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~-~~~~~ 247 (369)
...+.+|+..++... .. ...... -..+.+ +|.+...+..+. .|..+|+.+.+-... +.. ..
T Consensus 466 d~~i~~~~~~~~~~~~~~~-~~~~~~---v~~~~~s~~g~~l~~~~~dg------~i~iw~~~~~~~~~~-~~~~h~--- 531 (615)
T 1pgu_A 466 GNTIQVFKLSDLEVSFDLK-TPLRAK---PSYISISPSETYIAAGDVMG------KILLYDLQSREVKTS-RWAFRT--- 531 (615)
T ss_dssp TSCEEEEETTEEEEEEECS-SCCSSC---EEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEC-CSCCCS---
T ss_pred CCeEEEEECCCcccccccc-CCccCc---eEEEEECCCCCEEEEcCCCC------eEEEeeCCCCcceeE-eecCCC---
Confidence 346778887776542 22 111100 011333 666555554442 788899987654322 211 11
Q ss_pred CCceeEEEEE-----------CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeee
Q 036467 248 DKCQIEVGVF-----------RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMN 316 (369)
Q Consensus 248 ~~~~~~l~~~-----------~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 316 (369)
.....+.-. +|++.+.... ...+.||.++... ..+..+... .....-+.+
T Consensus 532 -~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~-----~~~~~~~~h---------~~~v~~l~~--- 592 (615)
T 1pgu_A 532 -SKINAISWKPAEKGANEEEIEEDLVATGSL-DTNIFIYSVKRPM-----KIIKALNAH---------KDGVNNLLW--- 592 (615)
T ss_dssp -SCEEEEEECCCC------CCSCCEEEEEET-TSCEEEEESSCTT-----CCEEETTSS---------TTCEEEEEE---
T ss_pred -CceeEEEEcCccccccccccCCCEEEEEcC-CCcEEEEECCCCc-----eechhhhcC---------ccceEEEEE---
Confidence 111222222 5666665554 4589999997521 122222211 112333444
Q ss_pred ccCCCCCCeEEEEECCCeEEEEECCCC
Q 036467 317 LSNGNGKNFLLIEKGDGELILYDFENE 343 (369)
Q Consensus 317 ~~~~~~~~~i~~~~~~~~~~~ydl~~~ 343 (369)
..+ +.++....++.+..||++++
T Consensus 593 -s~~---~~l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 593 -ETP---STLVSSGADACIKRWNVVLE 615 (615)
T ss_dssp -EET---TEEEEEETTSCEEEEEEC--
T ss_pred -cCC---CCeEEecCCceEEEEeeecC
Confidence 445 45544555667999998764
No 198
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=28.84 E-value=2.8e+02 Score=23.94 Aligned_cols=150 Identities=13% Similarity=0.153 Sum_probs=70.9
Q ss_pred eecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcc
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYEC 174 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (369)
+.+|-.++... .++.+.|||..+++....-... ......+.+.+.. .+ ++.. . ...
T Consensus 132 s~dg~~l~s~~-~d~~i~iwd~~~~~~~~~~~~h---------~~~v~~~~~~p~~-~~-l~s~-s-----------~d~ 187 (393)
T 1erj_A 132 SPDGKFLATGA-EDRLIRIWDIENRKIVMILQGH---------EQDIYSLDYFPSG-DK-LVSG-S-----------GDR 187 (393)
T ss_dssp CTTSSEEEEEE-TTSCEEEEETTTTEEEEEECCC---------SSCEEEEEECTTS-SE-EEEE-E-----------TTS
T ss_pred CCCCCEEEEEc-CCCeEEEEECCCCcEEEEEccC---------CCCEEEEEEcCCC-CE-EEEe-c-----------CCC
Confidence 44564433332 5788999999887765421111 1122345555432 22 2222 2 245
Q ss_pred eEEEEEcCCCceEEccCCCCeeeccCCcEEE---CceEEEEeecCCCCCceeEEEEEECCCcceee-eCCCCCc-CCCCC
Q 036467 175 EARVYSLASDKWKKINGGIPYHISSRAAVCF---NECLIWKASRGLGRGMTVLVVAFDMNREEFKE-IHRPEYK-DSHDK 249 (369)
Q Consensus 175 ~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~-~~~~~ 249 (369)
.+.+++.+++.-... -..... ...+.+ +|.+...+..+. .|..+|+.+..... +..+... ..+..
T Consensus 188 ~v~iwd~~~~~~~~~-~~~~~~---v~~~~~~~~~~~~l~~~s~d~------~v~iwd~~~~~~~~~~~~~~~~~~~h~~ 257 (393)
T 1erj_A 188 TVRIWDLRTGQCSLT-LSIEDG---VTTVAVSPGDGKYIAAGSLDR------AVRVWDSETGFLVERLDSENESGTGHKD 257 (393)
T ss_dssp EEEEEETTTTEEEEE-EECSSC---EEEEEECSTTCCEEEEEETTS------CEEEEETTTCCEEEEEC------CCCSS
T ss_pred cEEEEECCCCeeEEE-EEcCCC---cEEEEEECCCCCEEEEEcCCC------cEEEEECCCCcEEEeecccccCCCCCCC
Confidence 688888887754322 110000 011221 455555554442 68889988765432 2222111 11111
Q ss_pred ceeEEEEE-CCcEEEEEecCCCeEEEEEecc
Q 036467 250 CQIEVGVF-RGEFAMFHMWREDRVEIWTMKD 279 (369)
Q Consensus 250 ~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~ 279 (369)
....+.-. +|++.+... ....+.+|-++.
T Consensus 258 ~v~~v~~~~~g~~l~s~s-~d~~v~~wd~~~ 287 (393)
T 1erj_A 258 SVYSVVFTRDGQSVVSGS-LDRSVKLWNLQN 287 (393)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSEEEEEEC--
T ss_pred CEEEEEECCCCCEEEEEe-CCCEEEEEECCC
Confidence 12233333 466655444 456999999875
No 199
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=28.69 E-value=3e+02 Score=24.14 Aligned_cols=149 Identities=14% Similarity=0.093 Sum_probs=80.4
Q ss_pred cceEEEEEcCCCceEEccCCCCeeeccCCcEEECceE----EEEeecCCCCCceeEEEEEECCCcceeeeCC---C--CC
Q 036467 173 ECEARVYSLASDKWKKINGGIPYHISSRAAVCFNECL----IWKASRGLGRGMTVLVVAFDMNREEFKEIHR---P--EY 243 (369)
Q Consensus 173 ~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~~G~l----yw~~~~~~~~~~~~~il~fD~~~e~~~~i~~---P--~~ 243 (369)
...+.||++....=..+...-+..........++|.- |........ ....++..|+.+.++..+.- | ..
T Consensus 49 ~~gL~Vydl~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~--n~l~vf~iDp~~~~l~~i~~~~~pv~t~ 126 (355)
T 3amr_A 49 KSGLVVYSLDGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGK--NTIEIYAIDGKNGTLQSMTDPDHPIATA 126 (355)
T ss_dssp TTEEEEEETTSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTC--CEEEEEEECTTTCCEEECSCTTSCEECC
T ss_pred CCCEEEEcCCCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCC--CeEEEEEECCCCCceeeccccccCcCCC
Confidence 3589999995555555511222222222234555542 332222001 12344444778888888832 4 22
Q ss_pred cCCCCCceeEEEEE--CCcEEEEEecCCCeEEEEEeccCCCC-CCeeEEEEEcccccccccccccceeeeeEEeeeccCC
Q 036467 244 KDSHDKCQIEVGVF--RGEFAMFHMWREDRVEIWTMKDFGAR-ESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNG 320 (369)
Q Consensus 244 ~~~~~~~~~~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~-~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (369)
. .....+++--. .|+++++...+...+..|.+.+.+.+ .+=.++.++.+.. .+-++++ .+
T Consensus 127 ~--~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs------------q~Egcvv--Dd- 189 (355)
T 3amr_A 127 I--NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS------------QTEGMAA--DD- 189 (355)
T ss_dssp C--SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS------------CEEEEEE--ET-
T ss_pred C--CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC------------CcceEEE--cC-
Confidence 2 22345555434 47888887777789999999764332 1223455555432 2223211 22
Q ss_pred CCCCeEEEEECCCeEEEEECC
Q 036467 321 NGKNFLLIEKGDGELILYDFE 341 (369)
Q Consensus 321 ~~~~~i~~~~~~~~~~~ydl~ 341 (369)
..+.||+...+..+..||.+
T Consensus 190 -~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 190 -EYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp -TTTEEEEEETTTEEEEEECS
T ss_pred -CCCeEEEecccceEEEEeCC
Confidence 24889998877779999955
No 200
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=28.45 E-value=2.4e+02 Score=22.98 Aligned_cols=50 Identities=8% Similarity=0.125 Sum_probs=27.0
Q ss_pred EEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE-CCcEEEEEecCCCeEEEEEecc
Q 036467 224 LVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF-RGEFAMFHMWREDRVEIWTMKD 279 (369)
Q Consensus 224 ~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~ 279 (369)
.|..+|+.+.+-... +.. +...-..+.-. +|++.+... .+..+.||-+.+
T Consensus 265 ~i~iwd~~~~~~~~~-l~g----H~~~V~~l~~spdg~~l~S~s-~D~~v~iWd~~~ 315 (318)
T 4ggc_A 265 QLVIWKYPTMAKVAE-LKG----HTSRVLSLTMSPDGATVASAA-ADETLRLWRCFE 315 (318)
T ss_dssp CEEEEETTTCCEEEE-ECC----CSSCEEEEEECTTSSCEEEEE-TTTEEEEECCSC
T ss_pred EEEEEECCCCcEEEE-EcC----CCCCEEEEEEcCCCCEEEEEe-cCCeEEEEECCC
Confidence 688889877543221 111 11122233333 466554444 456999998765
No 201
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=27.96 E-value=3.1e+02 Score=24.08 Aligned_cols=59 Identities=12% Similarity=0.216 Sum_probs=30.3
Q ss_pred EEEEeecCCCCCceeEEEEEECCCcc--eeeeCCCCCcCCCCCceeEEEEE-CC-cEEEEEecCCCeEEEEEeccC
Q 036467 209 LIWKASRGLGRGMTVLVVAFDMNREE--FKEIHRPEYKDSHDKCQIEVGVF-RG-EFAMFHMWREDRVEIWTMKDF 280 (369)
Q Consensus 209 lyw~~~~~~~~~~~~~il~fD~~~e~--~~~i~~P~~~~~~~~~~~~l~~~-~G-~L~~~~~~~~~~~~iW~l~~~ 280 (369)
++..+..+. .|..||+.+.. ...+.. .. .....+.-. +| .+++... ....+.||-+...
T Consensus 292 ~l~tg~~dg------~v~vwd~~~~~~~~~~~~~--h~----~~v~~i~~sp~~~~~l~s~~-~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 292 ILATGSADK------TVALWDLRNLKLKLHSFES--HK----DEIFQVQWSPHNETILASSG-TDRRLHVWDLSKI 354 (430)
T ss_dssp EEEEEETTS------EEEEEETTCTTSCSEEEEC--CS----SCEEEEEECSSCTTEEEEEE-TTSCCEEEEGGGT
T ss_pred EEEEEeCCC------eEEEEeCCCCCCCeEEeec--CC----CCEEEEEECCCCCCEEEEEe-CCCcEEEEeCCCC
Confidence 555555442 79999998632 222211 11 111222222 25 3454444 3458999999863
No 202
>3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A*
Probab=27.80 E-value=1.8e+02 Score=25.71 Aligned_cols=80 Identities=9% Similarity=-0.024 Sum_probs=46.6
Q ss_pred EEECceEEEEeecC---CCCCceeEEEEEECCCcceeeeC-CCCCcCCCCCceeEEEEECCcEEEEEecCCCeEEEEEec
Q 036467 203 VCFNECLIWKASRG---LGRGMTVLVVAFDMNREEFKEIH-RPEYKDSHDKCQIEVGVFRGEFAMFHMWREDRVEIWTMK 278 (369)
Q Consensus 203 v~~~G~lyw~~~~~---~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~~~iW~l~ 278 (369)
+.-+|.+-+-.... .........+.|.-+..+|+.-. +|... ...+.++|++|+|.+...+ .....+..-.
T Consensus 180 ~l~~G~Lv~P~~~~~~~~~~~~~~s~~iyS~DG~tW~~~~~~~~~~----~~ep~vvE~dG~L~m~~R~-~g~r~v~~S~ 254 (379)
T 3sil_A 180 QLNDGKLVFPVQMVRTKNITTVLNTSFIYSTDGITWSLPSGYCEGF----GSENNIIEFNASLVNNIRN-SGLRRSFETK 254 (379)
T ss_dssp ECTTSCEEEEEEEEECTTSSCSEEEEEEEESSSSSEECCSCCEECT----TCCEEEEEETTEEEEEECC-SSBCBCEEES
T ss_pred EEcCCcEEEEEEEeeccCCCCCEEEEEEEcCCCCCeEECCCCCCcc----CCCCEEEEECCEEEEEEEe-CCCEEEEEEc
Confidence 34478777665321 11112234444444478998764 33221 3567899999999998877 3343445444
Q ss_pred cCCCCCCeeEE
Q 036467 279 DFGARESWTRM 289 (369)
Q Consensus 279 ~~~~~~~W~~~ 289 (369)
| .+.+|+..
T Consensus 255 D--~G~tWt~~ 263 (379)
T 3sil_A 255 D--FGKTWTEF 263 (379)
T ss_dssp S--SSSCCEEC
T ss_pred C--CCccCCCC
Confidence 4 45789975
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=27.31 E-value=3.2e+02 Score=24.08 Aligned_cols=212 Identities=14% Similarity=0.055 Sum_probs=101.1
Q ss_pred EEeeecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCC
Q 036467 92 ISGSCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDS 171 (369)
Q Consensus 92 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 171 (369)
+.-..+|-|.+.+. ....+.++++.+++...+..... ... +.+++..+ .++.... .
T Consensus 136 la~d~~g~lyv~d~-~~~~I~~id~~~g~~~~~~~~~~--------~~~---ia~~~~g~--~l~~~d~----------~ 191 (409)
T 3hrp_A 136 IAAVGNNTVLAYQR-DDPRVRLISVDDNKVTTVHPGFK--------GGK---PAVTKDKQ--RVYSIGW----------E 191 (409)
T ss_dssp EEECSTTEEEEEET-TTTEEEEEETTTTEEEEEEETCC--------BCB---CEECTTSS--EEEEEBS----------S
T ss_pred EEEeCCCCEEEEec-CCCcEEEEECCCCEEEEeeccCC--------CCc---eeEecCCC--cEEEEec----------C
Confidence 33345676666653 45789999999888776543311 111 33444322 2222211 0
Q ss_pred CcceEEEEEcCCCc-eEEccCCCCe-eeccCCcEEE---CceEEEEeecCCCCCceeEEEEEECCCcceeee-CCCCCcC
Q 036467 172 YECEARVYSLASDK-WKKINGGIPY-HISSRAAVCF---NECLIWKASRGLGRGMTVLVVAFDMNREEFKEI-HRPEYKD 245 (369)
Q Consensus 172 ~~~~~~vys~~t~~-W~~~~~~~p~-~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~ 245 (369)
....+.+++..++. .+.+ ..... ......++.+ +|.+|+... . ..|..+|+.+.....+ ..+....
T Consensus 192 ~~~~I~~~d~~~~~~~~~~-g~~~~~~~~~p~~iav~p~~g~lyv~d~-~------~~I~~~d~~~~~~~~~~~~~~~g~ 263 (409)
T 3hrp_A 192 GTHTVYVYMKASGWAPTRI-GQLGSTFSGKIGAVALDETEEWLYFVDS-N------KNFGRFNVKTQEVTLIKQLELSGS 263 (409)
T ss_dssp TTCEEEEEEGGGTTCEEEE-EECCTTSCSCCCBCEECTTSSEEEEECT-T------CEEEEEETTTCCEEEEEECCCCSC
T ss_pred CCceEEEEEcCCCceeEEe-eeccchhcCCcEEEEEeCCCCeEEEEEC-C------CcEEEEECCCCCEEEEecccccCC
Confidence 11156666665432 2232 11111 1111122222 689999432 2 2899999998776555 1111110
Q ss_pred CCCCce-e-EEEEE--CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEccccccccccc---ccceeeeeEEeeecc
Q 036467 246 SHDKCQ-I-EVGVF--RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNY---AFVHLKPVCEMMNLS 318 (369)
Q Consensus 246 ~~~~~~-~-~l~~~--~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~ 318 (369)
. ... . .++.. +|.|++.... .. .|++++..+ . -.. .........+.+. ......|.+++. .
T Consensus 264 -~-~~~P~~~ia~~p~~g~lyv~d~~-~~--~I~~~~~~g--~-~~~--~~g~~~~~g~~dg~~~~~~~~~P~gia~--d 331 (409)
T 3hrp_A 264 -L-GTNPGPYLIYYFVDSNFYMSDQN-LS--SVYKITPDG--E-CEW--FCGSATQKTVQDGLREEALFAQPNGMTV--D 331 (409)
T ss_dssp -C-CCSSCCEEEEETTTTEEEEEETT-TT--EEEEECTTC--C-EEE--EEECTTCCSCBCEEGGGCBCSSEEEEEE--C
T ss_pred -C-CCCccccEEEeCCCCEEEEEeCC-CC--EEEEEecCC--C-EEE--EEeCCCCCCcCCCcccccEeCCCeEEEE--e
Confidence 0 111 1 45555 4788877643 23 355555322 1 111 1111100000000 011234555422 4
Q ss_pred CCCCCCeEEEEEC--CCeEEEEECCCCeEEEeEE
Q 036467 319 NGNGKNFLLIEKG--DGELILYDFENEIATDFKI 350 (369)
Q Consensus 319 ~~~~~~~i~~~~~--~~~~~~ydl~~~~~~~v~~ 350 (369)
.+ |.|++... +.++..+|+.++++..+.-
T Consensus 332 ~d---G~lyvad~~~~~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 332 ED---GNFYIVDGFKGYCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp TT---CCEEEEETTTTCEEEEEETTTTEEEEEEE
T ss_pred CC---CCEEEEeCCCCCEEEEEECCCCEEEEEeC
Confidence 44 66888764 4569999988888876643
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=26.83 E-value=2.6e+02 Score=22.85 Aligned_cols=54 Identities=11% Similarity=0.068 Sum_probs=31.0
Q ss_pred CceEEEE-------eecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE-C-CcEEEEEe
Q 036467 206 NECLIWK-------ASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF-R-GEFAMFHM 266 (369)
Q Consensus 206 ~G~lyw~-------~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~-G~L~~~~~ 266 (369)
+|.+|+. .... ..|..||+.+.++..+..|.... .......+... + |+|++...
T Consensus 28 ~g~l~~~~~~~~~~~~~~------~~i~~~d~~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~g~l~v~~~ 90 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPA------GEILRIDLKTGKKTVICKPEVNG-YGGIPAGCQCDRDANQLFVADM 90 (314)
T ss_dssp TSCEEEEETTCEETTEEC------CEEEEECTTTCCEEEEECCEETT-EECCEEEEEECSSSSEEEEEET
T ss_pred CCCEEEEEeccccCCCCC------CEEEEEeCCCCcEEEEEecccCC-CCCCCceEEEecCCCcEEEEEC
Confidence 6888888 3332 27999999988887765432110 00112233433 4 77777664
No 205
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=26.68 E-value=2.6e+02 Score=22.81 Aligned_cols=58 Identities=14% Similarity=0.084 Sum_probs=35.7
Q ss_pred Cce-EEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE-CCcEEEEEecCCCeEEEEEe
Q 036467 206 NEC-LIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF-RGEFAMFHMWREDRVEIWTM 277 (369)
Q Consensus 206 ~G~-lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l 277 (369)
+|. +||...... .|..+|+.++ .+.+..|... ...+... +|+|++... ....+.+|-.
T Consensus 38 ~g~~l~~~~~~~~------~i~~~~~~~~-~~~~~~~~~~------~~~l~~~~dg~l~v~~~-~~~~i~~~d~ 97 (296)
T 3e5z_A 38 ARSAVIFSDVRQN------RTWAWSDDGQ-LSPEMHPSHH------QNGHCLNKQGHLIACSH-GLRRLERQRE 97 (296)
T ss_dssp GGTEEEEEEGGGT------EEEEEETTSC-EEEEESSCSS------EEEEEECTTCCEEEEET-TTTEEEEECS
T ss_pred CCCEEEEEeCCCC------EEEEEECCCC-eEEEECCCCC------cceeeECCCCcEEEEec-CCCeEEEEcC
Confidence 565 999987653 8999999998 7666544322 2234443 588766543 2345555544
No 206
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=26.39 E-value=3.4e+02 Score=23.96 Aligned_cols=209 Identities=13% Similarity=0.137 Sum_probs=0.0
Q ss_pred EEEeeecccEEEeeccCCceEEEEcCCccc--------------------------------------------------
Q 036467 91 EISGSCNGLLCISDQSCNEDIFLFNPSTKK-------------------------------------------------- 120 (369)
Q Consensus 91 ~~~~s~~GLl~~~~~~~~~~~~V~NP~T~~-------------------------------------------------- 120 (369)
.+.-+.+|-+++.. ..+.+.|||..|++
T Consensus 9 ~v~~s~dg~~l~~~--~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (450)
T 2vdu_B 9 NLLTSRDGSLVFAI--IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKR 86 (450)
T ss_dssp EEEECSSSSEEEEE--ETTEEEEEEEETTTEEEEEEEEECCC--------------------------------------
T ss_pred EEEecCCCCEEEEE--eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccccc
Q ss_pred --eeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcC--CCceEEccCCCCee
Q 036467 121 --YKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLA--SDKWKKINGGIPYH 196 (369)
Q Consensus 121 --~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~--t~~W~~~~~~~p~~ 196 (369)
+....+.+..... ......+.+.+ .+.+-++.... ...+.+|+.. ++.-... -.....
T Consensus 87 ~~~~~~~~~~~~~~~----~~~v~~~~~s~-d~~~l~~~~~~------------dg~v~iwd~~~~~~~~~~~-~~~~~~ 148 (450)
T 2vdu_B 87 TAAKVPSPGLGAPPI----YSYIRNLRLTS-DESRLIACADS------------DKSLLVFDVDKTSKNVLKL-RKRFCF 148 (450)
T ss_dssp -------------CC----CCCEEEEEECT-TSSEEEEEEGG------------GTEEEEEEECSSSSSCEEE-EEEEEC
T ss_pred cCccccCCCCCCCcc----CCceEEEEEcC-CCCEEEEEECC------------CCeEEEEECcCCCCceeee-eecccC
Q ss_pred eccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceee-eCCCCCcCCCCCceeEEEEECC---cEEEEEecCCC
Q 036467 197 ISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKE-IHRPEYKDSHDKCQIEVGVFRG---EFAMFHMWRED 270 (369)
Q Consensus 197 ~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~l~~~~G---~L~~~~~~~~~ 270 (369)
...-..+.+ +|.....+..+. .+..+|+.+..... ....... +......+.-... .-+++......
T Consensus 149 ~~~v~~~~~sp~~~~l~~~~~~g------~v~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~sp~~~~~~~l~s~~~d~ 220 (450)
T 2vdu_B 149 SKRPNAISIAEDDTTVIIADKFG------DVYSIDINSIPEEKFTQEPILG--HVSMLTDVHLIKDSDGHQFIITSDRDE 220 (450)
T ss_dssp SSCEEEEEECTTSSEEEEEETTS------EEEEEETTSCCCSSCCCCCSEE--CSSCEEEEEEEECTTSCEEEEEEETTS
T ss_pred CCCceEEEEcCCCCEEEEEeCCC------cEEEEecCCcccccccceeeec--ccCceEEEEEcCCCCCCcEEEEEcCCC
Q ss_pred eEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCCeEEEe
Q 036467 271 RVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENEIATDF 348 (369)
Q Consensus 271 ~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~~~~~v 348 (369)
.+.||-+.. ..-........... ...+.+ . + |..++....++.+..||+++++....
T Consensus 221 ~i~vwd~~~----~~~~~~~~~~h~~~----------v~~~~~----s-d--~~~l~s~~~d~~v~vwd~~~~~~~~~ 277 (450)
T 2vdu_B 221 HIKISHYPQ----CFIVDKWLFGHKHF----------VSSICC----G-K--DYLLLSAGGDDKIFAWDWKTGKNLST 277 (450)
T ss_dssp CEEEEEESC----TTCEEEECCCCSSC----------EEEEEE----C-S--TTEEEEEESSSEEEEEETTTCCEEEE
T ss_pred cEEEEECCC----CceeeeeecCCCCc----------eEEEEE----C-C--CCEEEEEeCCCeEEEEECCCCcEeee
No 207
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=25.79 E-value=3e+02 Score=23.14 Aligned_cols=152 Identities=13% Similarity=0.080 Sum_probs=74.4
Q ss_pred EEEeeecccEEEeeccCCceEEEEcCCccceee-CCCCCCCCCCCcccceEEEEEeeeCC-CCCeEEEEEEeeeCCCccc
Q 036467 91 EISGSCNGLLCISDQSCNEDIFLFNPSTKKYKK-LPVPEFDVPTIETTCFTSLGFGYHQA-DDDYKVIRSIYLYDKPFVD 168 (369)
Q Consensus 91 ~~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~-~~~ykvv~~~~~~~~~~~~ 168 (369)
.+.++.+|-+.+-+ ......++|..+++... +.... ......+.+.|. .+.+- +...
T Consensus 88 ~~s~s~D~~i~~w~--~~~~~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~~l-~s~s--------- 146 (343)
T 3lrv_A 88 IISRGPCNRLLLLY--PGNQITILDSKTNKVLREIEVDS---------ANEIIYMYGHNEVNTEYF-IWAD--------- 146 (343)
T ss_dssp EEEECSTTEEEEEE--TTTEEEEEETTTCCEEEEEECCC---------SSCEEEEECCC---CCEE-EEEE---------
T ss_pred eEEecCCCeEEEEE--ccCceEEeecCCcceeEEeecCC---------CCCEEEEEcCCCCCCCEE-EEEe---------
Confidence 45566677776665 45677777877776332 21111 012234555552 23332 2222
Q ss_pred CCCCcceEEEEEcCCCceEEccCCCCeeeccCCcE--EECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCC
Q 036467 169 IDSYECEARVYSLASDKWKKINGGIPYHISSRAAV--CFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDS 246 (369)
Q Consensus 169 ~~~~~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v--~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~ 246 (369)
....+.+|+..++.-... ....... .-..+ .-+|.+...+..+. .|..+|+.+.+-....+...
T Consensus 147 ---~dg~i~~wd~~~~~~~~~-~~~~~~~-~i~~~~~~pdg~~lasg~~dg------~i~iwd~~~~~~~~~~~~~~--- 212 (343)
T 3lrv_A 147 ---NRGTIGFQSYEDDSQYIV-HSAKSDV-EYSSGVLHKDSLLLALYSPDG------ILDVYNLSSPDQASSRFPVD--- 212 (343)
T ss_dssp ---TTCCEEEEESSSSCEEEE-ECCCSSC-CCCEEEECTTSCEEEEECTTS------CEEEEESSCTTSCCEECCCC---
T ss_pred ---CCCcEEEEECCCCcEEEE-EecCCCC-ceEEEEECCCCCEEEEEcCCC------EEEEEECCCCCCCccEEecc---
Confidence 245688888887654332 1111000 01112 22566555544442 78999999876542222220
Q ss_pred CCCceeEEEEE-CCcEEEEEecCCCeEEEEEecc
Q 036467 247 HDKCQIEVGVF-RGEFAMFHMWREDRVEIWTMKD 279 (369)
Q Consensus 247 ~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~ 279 (369)
+......+.-. +|...+... +. .+.||-+..
T Consensus 213 h~~~v~~l~fs~~g~~l~s~~-~~-~v~iwd~~~ 244 (343)
T 3lrv_A 213 EEAKIKEVKFADNGYWMVVEC-DQ-TVVCFDLRK 244 (343)
T ss_dssp TTSCEEEEEECTTSSEEEEEE-SS-BEEEEETTS
T ss_pred CCCCEEEEEEeCCCCEEEEEe-CC-eEEEEEcCC
Confidence 11112233323 466555555 44 899998875
No 208
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=25.14 E-value=3.2e+02 Score=23.28 Aligned_cols=193 Identities=9% Similarity=-0.024 Sum_probs=84.2
Q ss_pred eecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcc
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYEC 174 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (369)
+.+|-.++... .++.+.+||..+++....-... .. ... .+.+.+.... .++... ...
T Consensus 136 spdg~~l~sgs-~d~~i~iwd~~~~~~~~~~~~h---~~----~V~--~~~~~~~~~~-~l~s~s------------~D~ 192 (344)
T 4gqb_B 136 LSSGTQAVSGS-KDICIKVWDLAQQVVLSSYRAH---AA----QVT--CVAASPHKDS-VFLSCS------------EDN 192 (344)
T ss_dssp CTTSSEEEEEE-TTSCEEEEETTTTEEEEEECCC---SS----CEE--EEEECSSCTT-EEEEEE------------TTS
T ss_pred CCCCCEEEEEe-CCCeEEEEECCCCcEEEEEcCc---CC----ceE--EEEecCCCCC-ceeeec------------ccc
Confidence 44554443332 5678999999888765422111 01 222 3334333222 223222 235
Q ss_pred eEEEEEcCCCceEEccCCCCeeeccCCcEEE---CceEEEEeecCCCCCceeEEEEEECCCcceee-eCCCCCcCCCCCc
Q 036467 175 EARVYSLASDKWKKINGGIPYHISSRAAVCF---NECLIWKASRGLGRGMTVLVVAFDMNREEFKE-IHRPEYKDSHDKC 250 (369)
Q Consensus 175 ~~~vys~~t~~W~~~~~~~p~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~ 250 (369)
.+.+++.+++.-... -.....-.....+.+ ++.+...+..+. .|..+|+.+.+-.. +.. +...
T Consensus 193 ~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg------~v~~wd~~~~~~~~~~~~------h~~~ 259 (344)
T 4gqb_B 193 RILLWDTRCPKPASQ-IGCSAPGYLPTSLAWHPQQSEVFVFGDENG------TVSLVDTKSTSCVLSSAV------HSQC 259 (344)
T ss_dssp CEEEEETTSSSCEEE-CC----CCCEEEEEECSSCTTEEEEEETTS------EEEEEESCC--CCEEEEC------CSSC
T ss_pred ccccccccccceeee-eecceeeccceeeeecCCCCcceEEeccCC------cEEEEECCCCcEEEEEcC------CCCC
Confidence 678888877644322 011100000011222 334444444332 78889988764322 211 1111
Q ss_pred eeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEE
Q 036467 251 QIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIE 329 (369)
Q Consensus 251 ~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 329 (369)
...+.-. +|.-+++....+..+.||-++. + ++.++. . ......-+.+ ..+ +..++..
T Consensus 260 v~~v~fsp~g~~~lasgs~D~~i~vwd~~~---~----~~~~~~--~-------H~~~V~~v~~----sp~--~~~llas 317 (344)
T 4gqb_B 260 VTGLVFSPHSVPFLASLSEDCSLAVLDSSL---S----ELFRSQ--A-------HRDFVRDATW----SPL--NHSLLTT 317 (344)
T ss_dssp EEEEEECSSSSCCEEEEETTSCEEEECTTC---C----EEEEEC--C-------CSSCEEEEEE----CSS--STTEEEE
T ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEECCC---C----cEEEEc--C-------CCCCEEEEEE----eCC--CCeEEEE
Confidence 2223322 3533344444456899995542 1 122211 1 1112333444 433 2456554
Q ss_pred -ECCCeEEEEECCCCeE
Q 036467 330 -KGDGELILYDFENEIA 345 (369)
Q Consensus 330 -~~~~~~~~ydl~~~~~ 345 (369)
..++.+..|++.++..
T Consensus 318 ~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 318 VGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EETTSCEEEEECCC---
T ss_pred EcCCCeEEEEECCCCCC
Confidence 3466799999988754
No 209
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=24.87 E-value=4e+02 Score=24.33 Aligned_cols=51 Identities=4% Similarity=0.065 Sum_probs=28.7
Q ss_pred EEEEEECCCcceeeeCCCCCcCCCCCceeEEEEE-CCcEEEEEecCCCeEEEEEecc
Q 036467 224 LVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVF-RGEFAMFHMWREDRVEIWTMKD 279 (369)
Q Consensus 224 ~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~ 279 (369)
.|..+|+.+.+.....++... .....+.-. +|++.+.... ...+.||-++.
T Consensus 468 ~i~~~~~~~~~~~~~~~~~~~----~~v~~~~~s~~g~~l~~~~~-dg~i~iw~~~~ 519 (615)
T 1pgu_A 468 TIQVFKLSDLEVSFDLKTPLR----AKPSYISISPSETYIAAGDV-MGKILLYDLQS 519 (615)
T ss_dssp CEEEEETTEEEEEEECSSCCS----SCEEEEEECTTSSEEEEEET-TSCEEEEETTT
T ss_pred eEEEEECCCccccccccCCcc----CceEEEEECCCCCEEEEcCC-CCeEEEeeCCC
Confidence 688889888765422222211 112233333 5776665554 45899998874
No 210
>1q67_A Decapping protein involved in mRNA degradation- DCP1P; beta sandwich, transcription; 2.30A {Saccharomyces cerevisiae} SCOP: b.55.1.7
Probab=24.69 E-value=75 Score=25.53 Aligned_cols=30 Identities=20% Similarity=0.277 Sum_probs=24.4
Q ss_pred eEEEEECCCeEEEEECCCCeEEEeEEecCC
Q 036467 325 FLLIEKGDGELILYDFENEIATDFKIQRAP 354 (369)
Q Consensus 325 ~i~~~~~~~~~~~ydl~~~~~~~v~~~~~~ 354 (369)
.|++....-.++.||.++++|.+..++|..
T Consensus 36 qIL~~t~hasvYkfd~~~~eW~K~~~eG~L 65 (231)
T 1q67_A 36 QLLFHTPHASLYKWDFKKDEWNKLEYQGVL 65 (231)
T ss_dssp EEEEEEEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred HHHhcCCeEEEEEecCCCCceEecCcEEEE
Confidence 566666655699999999999999999854
No 211
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=24.24 E-value=96 Score=22.31 Aligned_cols=41 Identities=10% Similarity=0.076 Sum_probs=22.7
Q ss_pred ceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEee-----eCCCCCeEEEEEE
Q 036467 109 EDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGY-----HQADDDYKVIRSI 159 (369)
Q Consensus 109 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~-----d~~~~~ykvv~~~ 159 (369)
..++.+||.|+.|...-.. ....+.+.+ |...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~p~~~g----------~ls~v~i~~~~~~~d~~~~~yrIv~~~ 56 (118)
T 1xod_A 11 AVVMTRDDSSGGWLQLGGG----------GLSSVTVSKTLQPGDSGGTEFLVHGER 56 (118)
T ss_dssp EEEEEECSSSSCEEEGGGC----------CCEEEEEECC---------CCEEEEEE
T ss_pred EEEeeEcCCCCCEeeCCCC----------CcccEEEEEecCcCCCCCCEEEEEEEE
Confidence 4789999999988654322 112222332 4567789998865
No 212
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=24.11 E-value=1.8e+02 Score=25.34 Aligned_cols=26 Identities=4% Similarity=-0.184 Sum_probs=20.9
Q ss_pred CeEEEEECCCeEEEEECCCCeEEEeE
Q 036467 324 NFLLIEKGDGELILYDFENEIATDFK 349 (369)
Q Consensus 324 ~~i~~~~~~~~~~~ydl~~~~~~~v~ 349 (369)
+.||+-..+++++..|++|++..+..
T Consensus 112 g~Vy~Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 112 EKVYTGSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp EEEEECEEEEEEEEEETTTCCEEEEE
T ss_pred CEEEEEecCCEEEEEECCCCcEEEEE
Confidence 67777666777999999999987764
No 213
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=24.07 E-value=1.4e+02 Score=26.09 Aligned_cols=24 Identities=17% Similarity=0.160 Sum_probs=20.5
Q ss_pred ECceEEEEeecCCCCCceeEEEEEECCCcce
Q 036467 205 FNECLIWKASRGLGRGMTVLVVAFDMNREEF 235 (369)
Q Consensus 205 ~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~ 235 (369)
.+|.+|.-...+ .+.++|+.+++-
T Consensus 110 ~~g~Vy~Gs~~g-------~l~ald~~tG~~ 133 (339)
T 2be1_A 110 EDEKVYTGSMRT-------IMYTINMLNGEI 133 (339)
T ss_dssp CCEEEEECEEEE-------EEEEEETTTCCE
T ss_pred cCCEEEEEecCC-------EEEEEECCCCcE
Confidence 799999988876 899999998644
No 214
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=23.54 E-value=3.2e+02 Score=22.70 Aligned_cols=86 Identities=16% Similarity=0.256 Sum_probs=0.0
Q ss_pred CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEE
Q 036467 258 RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELIL 337 (369)
Q Consensus 258 ~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 337 (369)
+|.+.+....+. .+.||.++. ........+....-. ...+.+ ..+ +..++....++.+..
T Consensus 53 ~g~~l~~~~~dg-~i~iw~~~~----~~~~~~~~~~~h~~~---------v~~~~~----~~~--~~~l~s~~~dg~v~i 112 (368)
T 3mmy_A 53 PGNFLIAGSWAN-DVRCWEVQD----SGQTIPKAQQMHTGP---------VLDVCW----SDD--GSKVFTASCDKTAKM 112 (368)
T ss_dssp SSEEEEEEETTS-EEEEEEECT----TSCEEEEEEEECSSC---------EEEEEE----CTT--SSEEEEEETTSEEEE
T ss_pred CceEEEEECCCC-cEEEEEcCC----CCceeEEEeccccCC---------EEEEEE----CcC--CCEEEEEcCCCcEEE
Q ss_pred EECCCCeEEEeEEecCCCeeEEeeeeec
Q 036467 338 YDFENEIATDFKIQRAPRWFSVTTFVES 365 (369)
Q Consensus 338 ydl~~~~~~~v~~~~~~~~~~~~~y~~S 365 (369)
||+++++... ..+.......+.+.++
T Consensus 113 wd~~~~~~~~--~~~~~~~v~~~~~~~~ 138 (368)
T 3mmy_A 113 WDLSSNQAIQ--IAQHDAPVKTIHWIKA 138 (368)
T ss_dssp EETTTTEEEE--EEECSSCEEEEEEEEC
T ss_pred EEcCCCCcee--eccccCceEEEEEEeC
No 215
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=23.26 E-value=3.1e+02 Score=22.54 Aligned_cols=19 Identities=5% Similarity=0.018 Sum_probs=10.3
Q ss_pred CeEEEEECCCeEEEEECCC
Q 036467 324 NFLLIEKGDGELILYDFEN 342 (369)
Q Consensus 324 ~~i~~~~~~~~~~~ydl~~ 342 (369)
|.|++...++.+.....+.
T Consensus 306 g~l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 306 GTIYFGTRNGKFYALFNLE 324 (330)
T ss_dssp CCEEEECTTSCEEEEEC--
T ss_pred CEEEEEcCCCeEEEEeccc
Confidence 6777766665455444443
No 216
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=22.96 E-value=4e+02 Score=25.17 Aligned_cols=79 Identities=11% Similarity=0.158 Sum_probs=46.3
Q ss_pred ceEEEEEcCCC--ceEEccCCCCeeeccCCc-EEECceEEEEeecCCCCCceeEEEEEECCCcce-eeeCCCCCcCCCCC
Q 036467 174 CEARVYSLASD--KWKKINGGIPYHISSRAA-VCFNECLIWKASRGLGRGMTVLVVAFDMNREEF-KEIHRPEYKDSHDK 249 (369)
Q Consensus 174 ~~~~vys~~t~--~W~~~~~~~p~~~~~~~~-v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~ 249 (369)
-.+..++..++ .|+.- ...|. .... +..+|.+|.-..++ .+.+||.++.+- -..++|....
T Consensus 453 G~l~A~D~~tG~~~W~~~-~~~~~---~~g~~~tagg~vf~gt~dg-------~l~A~D~~tG~~lW~~~l~~g~~---- 517 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKM-ERFAV---WGGTMATAGDLVFYGTLDG-------YLKARDSDTGDLLWKFKIPSGAI---- 517 (599)
T ss_dssp EEEEEECTTTCCEEEEEE-ESSCC---CSBCEEETTTEEEEECTTS-------EEEEEETTTCCEEEEEECSSCCC----
T ss_pred CeEEEEECCCCCEEeEec-CCCCc---cCcceEecCCEEEEECCCC-------eEEEEECCCCCEEEEeeCCCCcE----
Confidence 35666677665 68764 22221 1122 44577777743333 899999987643 2236766542
Q ss_pred ceeEEEEECCcEEEEEec
Q 036467 250 CQIEVGVFRGEFAMFHMW 267 (369)
Q Consensus 250 ~~~~l~~~~G~L~~~~~~ 267 (369)
..+..-+.+|++|++...
T Consensus 518 ~~P~~y~~~G~qyv~~~~ 535 (599)
T 1w6s_A 518 GYPMTYTHKGTQYVAIYY 535 (599)
T ss_dssp SCCEEEEETTEEEEEEEE
T ss_pred eccEEEEeCCEEEEEEEc
Confidence 233444688999887654
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=22.33 E-value=3.5e+02 Score=22.71 Aligned_cols=204 Identities=6% Similarity=0.011 Sum_probs=92.3
Q ss_pred eecccEEEeeccCCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcc
Q 036467 95 SCNGLLCISDQSCNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYEC 174 (369)
Q Consensus 95 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (369)
+.+|.+...+. ....++++||.+++...++.+. ... ++.+++. +.+ ++. . ..
T Consensus 58 ~~~~~l~~~d~-~~~~i~~~d~~~~~~~~~~~~~---------~v~--~i~~~~d-g~l-~v~--~------------~~ 109 (326)
T 2ghs_A 58 PASGTAWWFNI-LERELHELHLASGRKTVHALPF---------MGS--ALAKISD-SKQ-LIA--S------------DD 109 (326)
T ss_dssp TTTTEEEEEEG-GGTEEEEEETTTTEEEEEECSS---------CEE--EEEEEET-TEE-EEE--E------------TT
T ss_pred CCCCEEEEEEC-CCCEEEEEECCCCcEEEEECCC---------cce--EEEEeCC-CeE-EEE--E------------CC
Confidence 33455544442 4568999999988776553221 112 3444543 222 222 1 12
Q ss_pred eEEEEEcCCCceEEccCCCCeeec--cCCc--EEECceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCc
Q 036467 175 EARVYSLASDKWKKINGGIPYHIS--SRAA--VCFNECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKC 250 (369)
Q Consensus 175 ~~~vys~~t~~W~~~~~~~p~~~~--~~~~--v~~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 250 (369)
.+.+|+..++..+.+ ...+.... .... +.-+|.+|+.............|..+| +.+...+. ... ..
T Consensus 110 gl~~~d~~~g~~~~~-~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~--~~~----~~ 180 (326)
T 2ghs_A 110 GLFLRDTATGVLTLH-AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLF--ADI----SI 180 (326)
T ss_dssp EEEEEETTTCCEEEE-ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEE--EEE----SS
T ss_pred CEEEEECCCCcEEEE-eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEee--CCC----cc
Confidence 477888888887765 22211100 0111 233688765443211111124788888 45554431 111 01
Q ss_pred eeEEEEE-CCc-EEEEEecCCCeEEEEEeccCCCCCCeeEEEEE-cccccccccccccceeeeeEEeeeccCCCCCCeEE
Q 036467 251 QIEVGVF-RGE-FAMFHMWREDRVEIWTMKDFGARESWTRMFVI-GRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLL 327 (369)
Q Consensus 251 ~~~l~~~-~G~-L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 327 (369)
...++.. +|+ |++... ....+.+|.++. ..+........+ ..... ...|-+++. ..+ |.++
T Consensus 181 ~~~i~~s~dg~~lyv~~~-~~~~I~~~d~~~-~~Gl~~~~~~~~~~~~~~---------~~~p~gi~~--d~~---G~lw 244 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVDT-KVNRLMRVPLDA-RTGLPTGKAEVFIDSTGI---------KGGMDGSVC--DAE---GHIW 244 (326)
T ss_dssp EEEEEECTTSCEEEEEET-TTCEEEEEEBCT-TTCCBSSCCEEEEECTTS---------SSEEEEEEE--CTT---SCEE
T ss_pred cCCeEEcCCCCEEEEEEC-CCCEEEEEEccc-ccCCcccCceEEEECCCC---------CCCCCeeEE--CCC---CCEE
Confidence 1123333 464 555543 233444444431 011011110111 11100 012333310 444 6777
Q ss_pred EEE-CCCeEEEEECCCCeEEEeEEe
Q 036467 328 IEK-GDGELILYDFENEIATDFKIQ 351 (369)
Q Consensus 328 ~~~-~~~~~~~ydl~~~~~~~v~~~ 351 (369)
+.. .+..+..||++++..+.+...
T Consensus 245 va~~~~~~v~~~d~~g~~~~~i~~~ 269 (326)
T 2ghs_A 245 NARWGEGAVDRYDTDGNHIARYEVP 269 (326)
T ss_dssp EEEETTTEEEEECTTCCEEEEEECS
T ss_pred EEEeCCCEEEEECCCCCEEEEEECC
Confidence 765 345699999977666666543
No 218
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=21.88 E-value=3.3e+02 Score=22.34 Aligned_cols=93 Identities=12% Similarity=0.155 Sum_probs=46.6
Q ss_pred EEEEEECCCcceee-eCCCCCcCCCCCceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEccccccccc
Q 036467 224 LVVAFDMNREEFKE-IHRPEYKDSHDKCQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFD 301 (369)
Q Consensus 224 ~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 301 (369)
.|..+|+.+..-.. +..... ....+.-. +|++.+... ....+.+|-++.. ..+..+....
T Consensus 36 ~v~lWd~~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~s~s-~d~~i~vwd~~~~------~~~~~~~~h~----- 97 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQVTET------PVRAGKFIARKNWIIVGS-DDFRIRVFNYNTG------EKVVDFEAHP----- 97 (304)
T ss_dssp EEEEEETTTTEEEEEEECCSS------CEEEEEEEGGGTEEEEEE-TTSEEEEEETTTC------CEEEEEECCS-----
T ss_pred cEEEEECCCCceeEEeeccCC------cEEEEEEeCCCCEEEEEC-CCCEEEEEECCCC------cEEEEEeCCC-----
Confidence 78888887764322 222111 11122222 466555554 4568999988741 1233332211
Q ss_pred ccccceeeeeEEeeeccCCCCCCeEEEEECCCeEEEEECCCCe
Q 036467 302 NYAFVHLKPVCEMMNLSNGNGKNFLLIEKGDGELILYDFENEI 344 (369)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ydl~~~~ 344 (369)
.....+.+ ..+ +..++-...++.+..||++++.
T Consensus 98 ----~~v~~~~~----~~~--~~~l~sgs~D~~v~lWd~~~~~ 130 (304)
T 2ynn_A 98 ----DYIRSIAV----HPT--KPYVLSGSDDLTVKLWNWENNW 130 (304)
T ss_dssp ----SCEEEEEE----CSS--SSEEEEEETTSCEEEEEGGGTT
T ss_pred ----CcEEEEEE----cCC--CCEEEEECCCCeEEEEECCCCc
Confidence 11333444 444 2334434455669999998774
No 219
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=21.77 E-value=3.3e+02 Score=22.26 Aligned_cols=137 Identities=12% Similarity=0.158 Sum_probs=66.3
Q ss_pred cceEEEEEcCCCceEEccCCCCeeeccCCcEE--ECceEEEEeecCCCCCceeEEEEEECCCcceee-eCCCCCcCCCCC
Q 036467 173 ECEARVYSLASDKWKKINGGIPYHISSRAAVC--FNECLIWKASRGLGRGMTVLVVAFDMNREEFKE-IHRPEYKDSHDK 249 (369)
Q Consensus 173 ~~~~~vys~~t~~W~~~~~~~p~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~ 249 (369)
...+.+++..++.....-......+ ..+. -+|.....+..+. .|..+|+.+.+... +.... .
T Consensus 44 dg~i~iw~~~~~~~~~~~~~h~~~v---~~~~~~~~~~~l~s~~~d~------~i~vwd~~~~~~~~~~~~~~------~ 108 (312)
T 4ery_A 44 DKLIKIWGAYDGKFEKTISGHKLGI---SDVAWSSDSNLLVSASDDK------TLKIWDVSSGKCLKTLKGHS------N 108 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCE---EEEEECTTSSEEEEEETTS------EEEEEETTTCCEEEEEECCS------S
T ss_pred CCeEEEEeCCCcccchhhccCCCce---EEEEEcCCCCEEEEECCCC------EEEEEECCCCcEEEEEcCCC------C
Confidence 3457788877766543311111110 0111 1454444444432 78889988765422 22111 1
Q ss_pred ceeEEEEE-CCcEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEE
Q 036467 250 CQIEVGVF-RGEFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLI 328 (369)
Q Consensus 250 ~~~~l~~~-~G~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 328 (369)
....+.-. +|.+.+... ....+.+|-++. ...+..+..... ....+.+ ..+ +..++.
T Consensus 109 ~v~~~~~~~~~~~l~s~~-~d~~i~iwd~~~------~~~~~~~~~~~~---------~v~~~~~----~~~--~~~l~~ 166 (312)
T 4ery_A 109 YVFCCNFNPQSNLIVSGS-FDESVRIWDVKT------GKCLKTLPAHSD---------PVSAVHF----NRD--GSLIVS 166 (312)
T ss_dssp CEEEEEECSSSSEEEEEE-TTSCEEEEETTT------CCEEEEECCCSS---------CEEEEEE----CTT--SSEEEE
T ss_pred CEEEEEEcCCCCEEEEEe-CCCcEEEEECCC------CEEEEEecCCCC---------cEEEEEE----cCC--CCEEEE
Confidence 11122222 356555544 345899998864 123333332111 1233444 444 244444
Q ss_pred EECCCeEEEEECCCCeEE
Q 036467 329 EKGDGELILYDFENEIAT 346 (369)
Q Consensus 329 ~~~~~~~~~ydl~~~~~~ 346 (369)
...++.+..||+++++..
T Consensus 167 ~~~d~~i~~wd~~~~~~~ 184 (312)
T 4ery_A 167 SSYDGLCRIWDTASGQCL 184 (312)
T ss_dssp EETTSCEEEEETTTCCEE
T ss_pred EeCCCcEEEEECCCCcee
Confidence 445667999999987653
No 220
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=21.62 E-value=3.5e+02 Score=22.45 Aligned_cols=115 Identities=8% Similarity=-0.004 Sum_probs=0.0
Q ss_pred CceEEEEeecCCCCCceeEEEEEECCCcceeeeCCCCCcCCCCCceeEEEEECC----cEEEEEecCCCeEEEEEeccCC
Q 036467 206 NECLIWKASRGLGRGMTVLVVAFDMNREEFKEIHRPEYKDSHDKCQIEVGVFRG----EFAMFHMWREDRVEIWTMKDFG 281 (369)
Q Consensus 206 ~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~l~~~~G----~L~~~~~~~~~~~~iW~l~~~~ 281 (369)
++.+...+..+ .|..+|+.++.....--......+......+.-... .-.++.......+.||-++.
T Consensus 34 ~~~~~~~~~~~-------~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~-- 104 (366)
T 3k26_A 34 DPLVFATVGSN-------RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT-- 104 (366)
T ss_dssp SCEEEEEEETT-------EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT--
T ss_pred CceEEEECCCC-------EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh--
Q ss_pred CCCCeeEEEEEcccccccccccccceeeeeEEeeeccC-CCCCCeEEEEECCCeEEEEECCCCeEEEe
Q 036467 282 ARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSN-GNGKNFLLIEKGDGELILYDFENEIATDF 348 (369)
Q Consensus 282 ~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~ydl~~~~~~~v 348 (369)
...+..+....-. ...+.+ .. + +..++....++.+..||+++++....
T Consensus 105 ----~~~~~~~~~~~~~---------i~~~~~----~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~ 153 (366)
T 3k26_A 105 ----MQCIKHYVGHGNA---------INELKF----HPRD--PNLLLSVSKDHALRLWNIQTDTLVAI 153 (366)
T ss_dssp ----CCEEEEEESCCSC---------EEEEEE----CSSC--TTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred ----ceEeeeecCCCCc---------EEEEEE----CCCC--CCEEEEEeCCCeEEEEEeecCeEEEE
No 221
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=21.35 E-value=3.9e+02 Score=22.89 Aligned_cols=192 Identities=13% Similarity=0.107 Sum_probs=88.9
Q ss_pred CCceEEEEcCCccceeeCCCCCCCCCCCcccceEEEEEeeeCCCCCeEEEEEEeeeCCCcccCCCCcceEEEEEcCCC--
Q 036467 107 CNEDIFLFNPSTKKYKKLPVPEFDVPTIETTCFTSLGFGYHQADDDYKVIRSIYLYDKPFVDIDSYECEARVYSLASD-- 184 (369)
Q Consensus 107 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~vys~~t~-- 184 (369)
.++.+.+||..+++....-........ ......+.+.+..+.+ ++. .. ....+.+++.+..
T Consensus 178 ~D~~i~~wd~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~-l~s-gs-----------~D~~v~~wd~~~~~~ 240 (380)
T 3iz6_a 178 GDQTCVLWDVTTGQRISIFGSEFPSGH----TADVLSLSINSLNANM-FIS-GS-----------CDTTVRLWDLRITSR 240 (380)
T ss_dssp TTSCEEEECTTTCCEEEEECCCSSSSC----CSCEEEEEECSSSCCE-EEE-EE-----------TTSCEEEEETTTTCC
T ss_pred CCCcEEEEEcCCCcEEEEeecccCCCC----ccCeEEEEeecCCCCE-EEE-EE-----------CCCeEEEEECCCCCc
Confidence 578899999999876643211111111 1122334444433332 222 22 2456788887632
Q ss_pred ceEEccCCCCeeeccCCcEEE--CceEEEEeecCCCCCceeEEEEEECCCcceee-eCCCCCcCCCC-CceeEEEEE-CC
Q 036467 185 KWKKINGGIPYHISSRAAVCF--NECLIWKASRGLGRGMTVLVVAFDMNREEFKE-IHRPEYKDSHD-KCQIEVGVF-RG 259 (369)
Q Consensus 185 ~W~~~~~~~p~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~-~~~~~l~~~-~G 259 (369)
.-+.+ ..... .-..+.+ +|.....+..+. .|..+|+.+.+-.. +.......... .....+.-. +|
T Consensus 241 ~~~~~-~~h~~---~v~~v~~~p~~~~l~s~s~D~------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g 310 (380)
T 3iz6_a 241 AVRTY-HGHEG---DINSVKFFPDGQRFGTGSDDG------TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISG 310 (380)
T ss_dssp CCEEE-CCCSS---CCCEEEECTTSSEEEEECSSS------CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSS
T ss_pred ceEEE-CCcCC---CeEEEEEecCCCeEEEEcCCC------eEEEEECCCCcEEEEecccccccccccCceEEEEECCCC
Confidence 22222 11000 0011222 455544444432 78889998865433 23222211111 111123322 47
Q ss_pred cEEEEEecCCCeEEEEEeccCCCCCCeeEEEEEcccccccccccccceeeeeEEeeeccCCCCCCeEEEEE-CCCeEEEE
Q 036467 260 EFAMFHMWREDRVEIWTMKDFGARESWTRMFVIGRRALINFDNYAFVHLKPVCEMMNLSNGNGKNFLLIEK-GDGELILY 338 (369)
Q Consensus 260 ~L~~~~~~~~~~~~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~y 338 (369)
++.+... ....+.||-+.. -.....+....- ........+.+ ..+ |..++.. .++.+..|
T Consensus 311 ~~l~~g~-~dg~i~vwd~~~------~~~~~~~~~~~~-----~h~~~v~~l~~----s~d---g~~l~sgs~D~~i~iW 371 (380)
T 3iz6_a 311 RLLFAGY-SNGDCYVWDTLL------AEMVLNLGTLQN-----SHEGRISCLGL----SSD---GSALCTGSWDKNLKIW 371 (380)
T ss_dssp SEEEEEC-TTSCEEEEETTT------CCEEEEECCSCS-----SCCCCCCEEEE----CSS---SSEEEEECTTSCEEEE
T ss_pred CEEEEEE-CCCCEEEEECCC------CceEEEEecccC-----CCCCceEEEEE----CCC---CCEEEEeeCCCCEEEE
Confidence 7666654 456899997653 122333321110 11112334455 555 5555544 45669999
Q ss_pred ECCCCe
Q 036467 339 DFENEI 344 (369)
Q Consensus 339 dl~~~~ 344 (369)
|+++++
T Consensus 372 ~~~~~~ 377 (380)
T 3iz6_a 372 AFSGHR 377 (380)
T ss_dssp ECCSSS
T ss_pred ecCCCc
Confidence 998753
No 222
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=21.13 E-value=1e+02 Score=22.81 Aligned_cols=29 Identities=3% Similarity=-0.002 Sum_probs=21.6
Q ss_pred eEEEEECCCeEEEEECCCCeEEEeEEecC
Q 036467 325 FLLIEKGDGELILYDFENEIATDFKIQRA 353 (369)
Q Consensus 325 ~i~~~~~~~~~~~ydl~~~~~~~v~~~~~ 353 (369)
.|+.....-.++.||.++++|++..+.|.
T Consensus 30 ~Il~~a~~v~vY~f~~~~~~W~K~~iEG~ 58 (134)
T 2lyd_A 30 EIVDSSSHVAFYTFNSSQNEWEKTDVEGA 58 (134)
T ss_dssp EEEEEEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred HHHhhCCeEEEEEecCCcCceeEcCCcce
Confidence 45555444447888999999999998874
No 223
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=20.97 E-value=2.9e+02 Score=26.00 Aligned_cols=25 Identities=4% Similarity=-0.041 Sum_probs=20.6
Q ss_pred CeEEEEECCCeEEEEECCCCeEEEe
Q 036467 324 NFLLIEKGDGELILYDFENEIATDF 348 (369)
Q Consensus 324 ~~i~~~~~~~~~~~ydl~~~~~~~v 348 (369)
+.||+...+..++++|.+|++..+-
T Consensus 118 ~~v~~~t~dg~l~AlD~~TG~~~W~ 142 (582)
T 1flg_A 118 DKVFFGTLDASVVALNKNTGKVVWK 142 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCCEEee
Confidence 6888887777899999999986554
Done!