Query 036468
Match_columns 64
No_of_seqs 106 out of 1198
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 12:57:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036468.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036468hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1502 Flavonol reductase/cin 99.6 1E-14 2.2E-19 77.9 7.5 61 4-64 5-66 (327)
2 PRK07478 short chain dehydroge 99.4 6.4E-13 1.4E-17 68.7 6.4 63 1-64 2-64 (254)
3 PRK05653 fabG 3-ketoacyl-(acyl 99.4 9.1E-13 2E-17 67.4 6.8 63 1-64 1-63 (246)
4 COG0300 DltE Short-chain dehyd 99.4 6.2E-13 1.3E-17 69.7 6.0 61 3-64 4-65 (265)
5 PRK06194 hypothetical protein; 99.4 1.8E-12 3.8E-17 68.0 6.7 60 4-64 5-64 (287)
6 PRK05867 short chain dehydroge 99.4 1.6E-12 3.5E-17 67.2 6.2 61 3-64 7-67 (253)
7 PRK07231 fabG 3-ketoacyl-(acyl 99.4 2.2E-12 4.8E-17 66.3 6.6 62 1-64 1-62 (251)
8 PLN02986 cinnamyl-alcohol dehy 99.4 5.4E-12 1.2E-16 67.2 8.2 64 1-64 1-65 (322)
9 PRK07890 short chain dehydroge 99.4 1.4E-12 3.1E-17 67.3 5.8 63 1-64 1-63 (258)
10 PRK09072 short chain dehydroge 99.4 2E-12 4.3E-17 67.2 6.3 62 1-64 1-62 (263)
11 PRK06114 short chain dehydroge 99.4 4.5E-12 9.7E-17 65.6 7.5 63 2-64 5-67 (254)
12 PRK05866 short chain dehydroge 99.4 1.8E-12 3.8E-17 68.6 6.0 61 3-64 38-98 (293)
13 PRK05557 fabG 3-ketoacyl-(acyl 99.4 4.3E-12 9.4E-17 65.0 7.3 64 1-64 1-64 (248)
14 PRK07035 short chain dehydroge 99.4 2.1E-12 4.6E-17 66.6 6.2 62 2-64 5-66 (252)
15 PRK06172 short chain dehydroge 99.4 2.3E-12 4.9E-17 66.6 6.3 61 3-64 5-65 (253)
16 PRK07523 gluconate 5-dehydroge 99.4 2.3E-12 5E-17 66.7 6.2 60 4-64 9-68 (255)
17 PRK08862 short chain dehydroge 99.4 2.9E-12 6.3E-17 65.8 6.5 63 1-64 1-63 (227)
18 PRK07453 protochlorophyllide o 99.4 2.5E-12 5.4E-17 68.6 6.4 61 3-64 4-64 (322)
19 PLN02583 cinnamoyl-CoA reducta 99.4 7.4E-12 1.6E-16 66.3 7.9 61 4-64 5-66 (297)
20 PRK13394 3-hydroxybutyrate deh 99.4 3.5E-12 7.7E-17 66.0 6.5 60 4-64 6-65 (262)
21 TIGR01832 kduD 2-deoxy-D-gluco 99.4 4.8E-12 1E-16 65.1 6.8 61 1-64 1-61 (248)
22 PRK08085 gluconate 5-dehydroge 99.4 3.6E-12 7.8E-17 65.9 6.3 62 2-64 6-67 (254)
23 PRK12429 3-hydroxybutyrate deh 99.4 3.9E-12 8.4E-17 65.6 6.4 60 4-64 3-62 (258)
24 PRK08339 short chain dehydroge 99.4 2.8E-12 6E-17 66.9 5.8 61 3-64 6-67 (263)
25 PRK08628 short chain dehydroge 99.4 5.7E-12 1.2E-16 65.2 6.8 61 2-64 4-64 (258)
26 PRK07576 short chain dehydroge 99.4 3.5E-12 7.5E-17 66.5 6.0 61 3-64 7-67 (264)
27 PLN02662 cinnamyl-alcohol dehy 99.4 9.5E-12 2.1E-16 66.1 7.7 61 4-64 3-64 (322)
28 PRK12826 3-ketoacyl-(acyl-carr 99.4 3.9E-12 8.5E-17 65.3 6.1 60 4-64 5-64 (251)
29 PRK07774 short chain dehydroge 99.4 5.3E-12 1.1E-16 65.0 6.5 61 3-64 4-64 (250)
30 PRK06139 short chain dehydroge 99.4 3.4E-12 7.3E-17 68.6 5.9 61 3-64 5-65 (330)
31 PLN02650 dihydroflavonol-4-red 99.4 1.1E-11 2.4E-16 66.7 7.9 64 1-64 1-65 (351)
32 PRK06138 short chain dehydroge 99.4 5.5E-12 1.2E-16 65.0 6.4 62 1-64 1-62 (252)
33 PRK05876 short chain dehydroge 99.4 4.5E-12 9.7E-17 66.5 6.2 61 3-64 4-64 (275)
34 PRK12481 2-deoxy-D-gluconate 3 99.4 5.9E-12 1.3E-16 65.2 6.5 59 3-64 6-64 (251)
35 PRK12937 short chain dehydroge 99.4 7.1E-12 1.5E-16 64.3 6.7 64 1-64 1-64 (245)
36 PRK07806 short chain dehydroge 99.4 9.1E-12 2E-16 64.1 7.1 62 3-64 4-65 (248)
37 PLN02989 cinnamyl-alcohol dehy 99.4 1.6E-11 3.5E-16 65.4 8.2 64 1-64 1-65 (325)
38 PRK07814 short chain dehydroge 99.3 5.3E-12 1.1E-16 65.7 6.2 61 3-64 8-68 (263)
39 PRK06124 gluconate 5-dehydroge 99.3 5.5E-12 1.2E-16 65.2 6.2 61 3-64 9-69 (256)
40 PRK08277 D-mannonate oxidoredu 99.3 5.5E-12 1.2E-16 66.0 6.2 60 4-64 9-68 (278)
41 PRK08589 short chain dehydroge 99.3 6.8E-12 1.5E-16 65.6 6.3 60 3-64 4-63 (272)
42 PRK07109 short chain dehydroge 99.3 5.9E-12 1.3E-16 67.7 6.1 60 4-64 7-66 (334)
43 PRK06935 2-deoxy-D-gluconate 3 99.3 1.2E-11 2.5E-16 64.2 7.0 60 3-64 13-72 (258)
44 PRK05854 short chain dehydroge 99.3 8E-12 1.7E-16 66.6 6.6 61 3-64 12-74 (313)
45 PRK08278 short chain dehydroge 99.3 1.5E-11 3.2E-16 64.4 7.4 63 2-64 3-71 (273)
46 PRK07063 short chain dehydroge 99.3 8.6E-12 1.9E-16 64.7 6.4 60 4-64 6-67 (260)
47 PRK12745 3-ketoacyl-(acyl-carr 99.3 1.5E-11 3.2E-16 63.6 7.1 60 5-64 2-61 (256)
48 TIGR03325 BphB_TodD cis-2,3-di 99.3 1.6E-11 3.4E-16 63.8 7.1 60 1-64 1-60 (262)
49 PRK07326 short chain dehydroge 99.3 9.6E-12 2.1E-16 63.6 6.1 60 3-64 4-63 (237)
50 PRK08643 acetoin reductase; Va 99.3 1E-11 2.2E-16 64.2 6.2 59 5-64 2-60 (256)
51 PRK07097 gluconate 5-dehydroge 99.3 1.2E-11 2.6E-16 64.3 6.4 61 3-64 8-68 (265)
52 PRK07904 short chain dehydroge 99.3 1.9E-11 4.1E-16 63.5 7.0 60 4-64 7-69 (253)
53 PRK07825 short chain dehydroge 99.3 8.4E-12 1.8E-16 65.1 5.7 42 1-42 1-42 (273)
54 PRK06701 short chain dehydroge 99.3 2.4E-11 5.2E-16 64.2 7.5 61 4-64 45-105 (290)
55 PRK08213 gluconate 5-dehydroge 99.3 1.1E-11 2.5E-16 64.2 6.0 61 3-64 10-70 (259)
56 PLN02214 cinnamoyl-CoA reducta 99.3 3.1E-11 6.7E-16 65.0 7.7 61 4-64 9-69 (342)
57 PRK07454 short chain dehydroge 99.3 1.4E-11 3E-16 63.3 6.1 60 4-64 5-64 (241)
58 PRK06197 short chain dehydroge 99.3 1.3E-11 2.7E-16 65.5 6.1 60 4-64 15-76 (306)
59 PRK09134 short chain dehydroge 99.3 2.2E-11 4.8E-16 63.1 7.0 62 3-64 7-68 (258)
60 PRK08265 short chain dehydroge 99.3 1.9E-11 4.2E-16 63.6 6.7 58 3-64 4-61 (261)
61 PRK06720 hypothetical protein; 99.3 2.1E-11 4.5E-16 60.5 6.5 61 3-64 14-74 (169)
62 PRK07666 fabG 3-ketoacyl-(acyl 99.3 1.5E-11 3.2E-16 63.1 6.1 60 4-64 6-65 (239)
63 PRK07062 short chain dehydroge 99.3 2.3E-11 4.9E-16 63.3 6.8 61 3-64 6-68 (265)
64 PRK05565 fabG 3-ketoacyl-(acyl 99.3 1.8E-11 3.8E-16 62.8 6.3 63 1-64 1-64 (247)
65 PRK07024 short chain dehydroge 99.3 1.4E-11 3.1E-16 63.9 5.9 58 5-64 2-59 (257)
66 PRK12823 benD 1,6-dihydroxycyc 99.3 1.8E-11 3.9E-16 63.4 6.3 59 4-64 7-65 (260)
67 PRK05786 fabG 3-ketoacyl-(acyl 99.3 1.9E-11 4.1E-16 62.6 6.3 62 1-64 1-62 (238)
68 PRK06914 short chain dehydroge 99.3 2.4E-11 5.2E-16 63.6 6.8 60 4-64 2-63 (280)
69 PRK07792 fabG 3-ketoacyl-(acyl 99.3 2.9E-11 6.3E-16 64.3 7.1 62 3-64 10-71 (306)
70 PRK08217 fabG 3-ketoacyl-(acyl 99.3 2E-11 4.4E-16 62.8 6.3 63 1-64 1-63 (253)
71 PLN02240 UDP-glucose 4-epimera 99.3 4.6E-11 9.9E-16 64.2 7.7 64 1-64 1-67 (352)
72 PRK12743 oxidoreductase; Provi 99.3 2.9E-11 6.2E-16 62.7 6.7 60 5-64 2-61 (256)
73 PRK07102 short chain dehydroge 99.3 1.7E-11 3.7E-16 63.0 5.8 58 6-64 2-60 (243)
74 PRK06113 7-alpha-hydroxysteroi 99.3 2.4E-11 5.3E-16 62.9 6.4 61 3-64 9-69 (255)
75 PLN02253 xanthoxin dehydrogena 99.3 2.8E-11 6.1E-16 63.4 6.7 59 4-64 17-75 (280)
76 PRK06128 oxidoreductase; Provi 99.3 3.2E-11 6.9E-16 63.9 6.9 61 4-64 54-115 (300)
77 PRK08251 short chain dehydroge 99.3 2.7E-11 5.7E-16 62.4 6.4 59 5-64 2-62 (248)
78 COG3967 DltE Short-chain dehyd 99.3 1.8E-11 4E-16 62.4 5.5 42 1-42 1-42 (245)
79 PRK08303 short chain dehydroge 99.3 4.1E-11 8.9E-16 63.9 7.2 62 3-64 6-76 (305)
80 PRK07856 short chain dehydroge 99.3 3.8E-11 8.3E-16 62.1 6.8 40 1-40 2-41 (252)
81 PLN00198 anthocyanidin reducta 99.3 6.3E-11 1.4E-15 63.5 7.7 60 4-64 8-68 (338)
82 TIGR03206 benzo_BadH 2-hydroxy 99.3 2.3E-11 5E-16 62.6 5.8 60 4-64 2-61 (250)
83 PRK06200 2,3-dihydroxy-2,3-dih 99.3 2.7E-11 5.8E-16 63.0 6.1 58 3-64 4-61 (263)
84 PRK06077 fabG 3-ketoacyl-(acyl 99.3 4.4E-11 9.6E-16 61.6 6.8 62 3-64 4-65 (252)
85 PRK07067 sorbitol dehydrogenas 99.3 3.4E-11 7.3E-16 62.4 6.4 58 3-64 4-61 (257)
86 PRK06101 short chain dehydroge 99.3 3.1E-11 6.7E-16 62.2 6.2 54 6-64 2-55 (240)
87 PRK12939 short chain dehydroge 99.3 3.5E-11 7.6E-16 61.9 6.4 60 4-64 6-65 (250)
88 TIGR01472 gmd GDP-mannose 4,6- 99.3 4.5E-11 9.8E-16 64.2 7.0 59 6-64 1-64 (343)
89 TIGR01289 LPOR light-dependent 99.3 3.3E-11 7.2E-16 64.3 6.4 60 4-64 2-62 (314)
90 PRK05875 short chain dehydroge 99.3 3.3E-11 7.2E-16 62.9 6.2 61 3-64 5-67 (276)
91 KOG0725 Reductases with broad 99.3 5.1E-11 1.1E-15 62.8 6.9 62 3-64 6-69 (270)
92 PRK07985 oxidoreductase; Provi 99.3 5.6E-11 1.2E-15 63.0 7.1 61 4-64 48-109 (294)
93 PLN02896 cinnamyl-alcohol dehy 99.3 6.1E-11 1.3E-15 64.0 7.2 59 4-64 9-67 (353)
94 KOG1205 Predicted dehydrogenas 99.3 2.9E-11 6.2E-16 64.0 5.8 61 3-64 10-72 (282)
95 PRK05717 oxidoreductase; Valid 99.3 4.2E-11 9E-16 62.0 6.4 58 3-64 8-65 (255)
96 PRK06949 short chain dehydroge 99.3 3E-11 6.6E-16 62.4 5.8 61 3-64 7-67 (258)
97 PRK08340 glucose-1-dehydrogena 99.3 2.3E-11 5.1E-16 63.1 5.4 57 6-64 1-57 (259)
98 PRK07370 enoyl-(acyl carrier p 99.3 6.9E-11 1.5E-15 61.5 7.2 62 3-64 4-68 (258)
99 TIGR02622 CDP_4_6_dhtase CDP-g 99.3 6.2E-11 1.3E-15 63.9 7.2 59 4-64 3-61 (349)
100 PRK12825 fabG 3-ketoacyl-(acyl 99.3 5.8E-11 1.3E-15 60.8 6.8 61 4-64 5-65 (249)
101 PRK06947 glucose-1-dehydrogena 99.3 4.8E-11 1E-15 61.5 6.5 59 5-64 2-61 (248)
102 PRK09242 tropinone reductase; 99.3 3.6E-11 7.8E-16 62.3 6.0 61 3-64 7-69 (257)
103 PRK12744 short chain dehydroge 99.3 9.6E-11 2.1E-15 60.8 7.5 61 4-64 7-70 (257)
104 PRK09135 pteridine reductase; 99.3 6.5E-11 1.4E-15 60.8 6.9 62 3-64 4-66 (249)
105 PRK07677 short chain dehydroge 99.3 3.5E-11 7.7E-16 62.2 5.9 58 6-64 2-59 (252)
106 PRK08267 short chain dehydroge 99.2 3.8E-11 8.2E-16 62.3 5.9 56 6-64 2-57 (260)
107 PRK06179 short chain dehydroge 99.2 4.9E-11 1.1E-15 62.1 6.4 38 4-41 3-40 (270)
108 PRK08642 fabG 3-ketoacyl-(acyl 99.2 6.1E-11 1.3E-15 61.1 6.6 61 1-64 1-61 (253)
109 PRK05650 short chain dehydroge 99.2 3.8E-11 8.1E-16 62.7 5.9 58 6-64 1-58 (270)
110 PRK09291 short chain dehydroge 99.2 3.2E-11 6.9E-16 62.3 5.6 59 5-64 2-60 (257)
111 PRK08936 glucose-1-dehydrogena 99.2 7.2E-11 1.6E-15 61.3 6.9 62 3-64 5-66 (261)
112 PRK09186 flagellin modificatio 99.2 7.3E-11 1.6E-15 61.0 6.8 61 3-64 2-64 (256)
113 PRK08226 short chain dehydroge 99.2 5.6E-11 1.2E-15 61.7 6.4 60 3-64 4-63 (263)
114 PLN02653 GDP-mannose 4,6-dehyd 99.2 7.7E-11 1.7E-15 63.2 7.0 61 4-64 5-69 (340)
115 TIGR01963 PHB_DH 3-hydroxybuty 99.2 3.7E-11 7.9E-16 61.9 5.5 58 6-64 2-59 (255)
116 PRK08993 2-deoxy-D-gluconate 3 99.2 8.9E-11 1.9E-15 60.8 7.0 59 3-64 8-66 (253)
117 COG4221 Short-chain alcohol de 99.2 6.3E-11 1.4E-15 61.4 6.2 58 4-64 5-62 (246)
118 PRK06924 short chain dehydroge 99.2 1E-10 2.2E-15 60.3 7.1 56 6-64 2-57 (251)
119 PRK12828 short chain dehydroge 99.2 6.2E-11 1.3E-15 60.5 6.2 40 3-42 5-44 (239)
120 PRK07791 short chain dehydroge 99.2 8E-11 1.7E-15 62.1 6.7 61 3-64 4-73 (286)
121 PRK06125 short chain dehydroge 99.2 5.7E-11 1.2E-15 61.7 6.1 61 3-64 5-66 (259)
122 KOG1201 Hydroxysteroid 17-beta 99.2 9.4E-11 2E-15 62.2 6.7 59 4-64 37-95 (300)
123 PRK08264 short chain dehydroge 99.2 9E-11 1.9E-15 60.1 6.6 55 2-64 3-58 (238)
124 PRK07775 short chain dehydroge 99.2 6.6E-11 1.4E-15 62.0 6.2 59 5-64 10-68 (274)
125 PRK06196 oxidoreductase; Provi 99.2 4.4E-11 9.4E-16 63.8 5.5 56 4-64 25-80 (315)
126 PRK07533 enoyl-(acyl carrier p 99.2 7.6E-11 1.6E-15 61.4 6.2 61 2-64 7-69 (258)
127 PRK12827 short chain dehydroge 99.2 1.6E-10 3.5E-15 59.3 7.4 61 4-64 5-68 (249)
128 PRK06171 sorbitol-6-phosphate 99.2 1.4E-10 3.1E-15 60.3 7.1 40 2-41 6-45 (266)
129 PRK15181 Vi polysaccharide bio 99.2 1.9E-10 4.2E-15 62.1 7.6 60 4-64 14-78 (348)
130 PRK08416 7-alpha-hydroxysteroi 99.2 9.7E-11 2.1E-15 60.9 6.3 62 3-64 6-68 (260)
131 PLN02427 UDP-apiose/xylose syn 99.2 1.5E-10 3.3E-15 63.1 7.2 59 4-64 13-74 (386)
132 PRK06180 short chain dehydroge 99.2 1.2E-10 2.5E-15 61.1 6.5 57 4-64 3-59 (277)
133 PRK06181 short chain dehydroge 99.2 8.7E-11 1.9E-15 61.0 5.9 58 6-64 2-59 (263)
134 PRK08063 enoyl-(acyl carrier p 99.2 7.7E-11 1.7E-15 60.7 5.7 60 4-64 3-63 (250)
135 PRK08594 enoyl-(acyl carrier p 99.2 2.2E-10 4.8E-15 59.7 7.3 60 3-64 5-68 (257)
136 PLN02657 3,8-divinyl protochlo 99.2 1.6E-10 3.4E-15 63.4 7.0 61 4-64 59-120 (390)
137 KOG1208 Dehydrogenases with di 99.2 1.3E-10 2.7E-15 62.4 6.5 60 4-64 34-95 (314)
138 PRK07201 short chain dehydroge 99.2 7.6E-11 1.6E-15 67.5 5.9 60 4-64 370-429 (657)
139 PF00106 adh_short: short chai 99.2 1E-10 2.2E-15 57.2 5.6 59 6-64 1-61 (167)
140 PRK05872 short chain dehydroge 99.2 1.4E-10 3.1E-15 61.4 6.5 59 4-64 8-66 (296)
141 PRK06500 short chain dehydroge 99.2 1.2E-10 2.6E-15 59.9 6.1 57 4-64 5-61 (249)
142 PLN02780 ketoreductase/ oxidor 99.2 7.6E-11 1.6E-15 63.2 5.5 59 5-64 53-113 (320)
143 PRK12748 3-ketoacyl-(acyl-carr 99.2 1.8E-10 3.8E-15 59.7 6.6 64 1-64 1-76 (256)
144 PRK12747 short chain dehydroge 99.2 1.6E-10 3.5E-15 59.7 6.4 60 4-64 3-63 (252)
145 PRK06398 aldose dehydrogenase; 99.2 2.8E-10 6.1E-15 59.2 7.2 38 3-40 4-41 (258)
146 PRK12384 sorbitol-6-phosphate 99.2 2.1E-10 4.6E-15 59.4 6.7 59 5-64 2-62 (259)
147 PRK12935 acetoacetyl-CoA reduc 99.2 2.3E-10 5E-15 58.9 6.8 60 4-64 5-65 (247)
148 PRK12746 short chain dehydroge 99.2 2E-10 4.4E-15 59.3 6.5 60 4-64 5-65 (254)
149 PRK06198 short chain dehydroge 99.2 1.4E-10 3E-15 60.1 5.9 60 4-64 5-65 (260)
150 PRK12938 acetyacetyl-CoA reduc 99.2 2.6E-10 5.6E-15 58.7 6.8 61 4-64 2-62 (246)
151 PRK06123 short chain dehydroge 99.2 1.8E-10 3.9E-15 59.3 6.2 60 5-64 2-61 (248)
152 PRK12824 acetoacetyl-CoA reduc 99.2 2.9E-10 6.3E-15 58.3 6.9 59 6-64 3-61 (245)
153 TIGR02415 23BDH acetoin reduct 99.2 1.5E-10 3.3E-15 59.8 5.8 58 6-64 1-58 (254)
154 PRK07074 short chain dehydroge 99.2 2E-10 4.3E-15 59.5 6.2 57 5-64 2-58 (257)
155 PRK06079 enoyl-(acyl carrier p 99.2 2.1E-10 4.6E-15 59.5 6.3 58 3-64 5-64 (252)
156 CHL00194 ycf39 Ycf39; Provisio 99.2 1.7E-10 3.7E-15 61.6 6.1 36 6-41 1-36 (317)
157 PRK05855 short chain dehydroge 99.2 1.6E-10 3.5E-15 65.1 6.2 60 4-64 314-373 (582)
158 PRK06841 short chain dehydroge 99.2 3E-10 6.5E-15 58.7 6.8 58 3-64 13-70 (255)
159 PRK10538 malonic semialdehyde 99.2 1.6E-10 3.5E-15 59.7 5.7 55 6-64 1-55 (248)
160 PRK08415 enoyl-(acyl carrier p 99.2 1.8E-10 3.9E-15 60.6 5.9 39 1-39 1-41 (274)
161 PRK06550 fabG 3-ketoacyl-(acyl 99.2 3.9E-10 8.4E-15 57.7 6.9 40 1-40 1-40 (235)
162 PRK08703 short chain dehydroge 99.2 2.1E-10 4.6E-15 58.9 6.0 39 4-42 5-43 (239)
163 KOG1371 UDP-glucose 4-epimeras 99.2 2.8E-10 6.1E-15 61.1 6.5 60 5-64 2-63 (343)
164 PRK05993 short chain dehydroge 99.2 2.4E-10 5.2E-15 60.0 6.2 38 4-41 3-40 (277)
165 PRK07023 short chain dehydroge 99.2 3.1E-10 6.7E-15 58.4 6.5 53 6-64 2-54 (243)
166 PLN00141 Tic62-NAD(P)-related 99.2 4.9E-10 1.1E-14 58.2 7.2 56 4-64 16-71 (251)
167 PLN02686 cinnamoyl-CoA reducta 99.1 2.9E-10 6.3E-15 61.9 6.6 37 4-40 52-88 (367)
168 PRK05599 hypothetical protein; 99.1 1.8E-10 4E-15 59.6 5.5 57 6-64 1-58 (246)
169 PRK06505 enoyl-(acyl carrier p 99.1 2.1E-10 4.5E-15 60.2 5.7 37 3-39 5-43 (271)
170 PLN02206 UDP-glucuronate decar 99.1 5.5E-10 1.2E-14 62.2 7.6 36 4-39 118-153 (442)
171 PRK12936 3-ketoacyl-(acyl-carr 99.1 3.6E-10 7.7E-15 58.0 6.4 58 3-64 4-61 (245)
172 COG1087 GalE UDP-glucose 4-epi 99.1 2.8E-10 6.2E-15 60.7 6.1 53 6-64 1-53 (329)
173 PRK06523 short chain dehydroge 99.1 3.7E-10 8.1E-15 58.6 6.5 37 4-40 8-44 (260)
174 PRK06182 short chain dehydroge 99.1 4E-10 8.6E-15 58.9 6.5 38 4-41 2-39 (273)
175 PLN03209 translocon at the inn 99.1 3.2E-10 6.9E-15 64.7 6.4 39 4-42 79-117 (576)
176 PRK06483 dihydromonapterin red 99.1 5.4E-10 1.2E-14 57.3 6.8 37 5-41 2-38 (236)
177 PRK07984 enoyl-(acyl carrier p 99.1 4.3E-10 9.3E-15 58.9 6.5 59 4-64 5-65 (262)
178 TIGR01831 fabG_rel 3-oxoacyl-( 99.1 2.7E-10 5.8E-15 58.4 5.6 57 8-64 1-57 (239)
179 PRK08945 putative oxoacyl-(acy 99.1 2.4E-10 5.3E-15 58.9 5.5 39 4-42 11-49 (247)
180 PRK06463 fabG 3-ketoacyl-(acyl 99.1 5.8E-10 1.3E-14 57.8 6.9 37 3-39 5-41 (255)
181 PRK06940 short chain dehydroge 99.1 2.8E-10 6.1E-15 59.8 5.8 57 5-64 2-58 (275)
182 PRK06057 short chain dehydroge 99.1 2.7E-10 5.8E-15 59.1 5.6 38 4-41 6-43 (255)
183 PRK06482 short chain dehydroge 99.1 4.7E-10 1E-14 58.7 6.5 55 6-64 3-57 (276)
184 PRK12829 short chain dehydroge 99.1 4.1E-10 8.8E-15 58.4 6.2 38 4-41 10-47 (264)
185 PRK08220 2,3-dihydroxybenzoate 99.1 6.9E-10 1.5E-14 57.3 7.0 37 3-39 6-42 (252)
186 PRK08263 short chain dehydroge 99.1 3.9E-10 8.5E-15 59.0 6.0 38 4-41 2-39 (275)
187 KOG4169 15-hydroxyprostaglandi 99.1 3.4E-10 7.5E-15 58.5 5.4 63 1-64 1-64 (261)
188 TIGR03589 PseB UDP-N-acetylglu 99.1 6.9E-10 1.5E-14 59.5 6.8 58 4-64 3-62 (324)
189 PF13460 NAD_binding_10: NADH( 99.1 6.3E-10 1.4E-14 55.2 6.2 48 8-64 1-48 (183)
190 PRK09730 putative NAD(P)-bindi 99.1 7.2E-10 1.6E-14 56.9 6.5 58 6-64 2-60 (247)
191 PLN02166 dTDP-glucose 4,6-dehy 99.1 1.2E-09 2.5E-14 60.9 7.6 36 4-39 119-154 (436)
192 PRK08177 short chain dehydroge 99.1 8.4E-10 1.8E-14 56.4 6.6 37 6-42 2-38 (225)
193 PRK06484 short chain dehydroge 99.1 7.1E-10 1.5E-14 62.3 6.7 59 2-64 2-60 (520)
194 TIGR01829 AcAcCoA_reduct aceto 99.1 7.9E-10 1.7E-14 56.6 6.2 59 6-64 1-59 (242)
195 PLN02572 UDP-sulfoquinovose sy 99.1 1.2E-09 2.7E-14 60.8 7.3 34 4-37 46-79 (442)
196 PRK07424 bifunctional sterol d 99.1 1.3E-09 2.8E-14 60.3 7.2 39 3-41 176-214 (406)
197 PRK07831 short chain dehydroge 99.1 1.1E-09 2.3E-14 57.0 6.6 60 4-64 16-78 (262)
198 PRK08690 enoyl-(acyl carrier p 99.1 7.2E-10 1.6E-14 57.9 5.9 59 4-64 5-65 (261)
199 TIGR01500 sepiapter_red sepiap 99.1 6.7E-10 1.5E-14 57.7 5.7 57 7-64 2-64 (256)
200 PRK08219 short chain dehydroge 99.1 5.3E-10 1.1E-14 56.8 5.2 36 5-41 3-38 (227)
201 PRK08159 enoyl-(acyl carrier p 99.1 8.3E-10 1.8E-14 58.0 5.7 59 4-64 9-69 (272)
202 PRK05884 short chain dehydroge 99.0 5.4E-10 1.2E-14 57.2 4.6 35 7-41 2-36 (223)
203 PRK07889 enoyl-(acyl carrier p 99.0 1.7E-09 3.6E-14 56.4 6.5 58 4-64 6-66 (256)
204 TIGR01830 3oxo_ACP_reduc 3-oxo 99.0 1.3E-09 2.8E-14 55.7 6.0 57 8-64 1-57 (239)
205 PRK10675 UDP-galactose-4-epime 99.0 2.2E-09 4.7E-14 57.5 7.0 34 6-39 1-34 (338)
206 PRK06603 enoyl-(acyl carrier p 99.0 1.2E-09 2.6E-14 57.0 5.8 36 4-39 7-44 (260)
207 PRK08017 oxidoreductase; Provi 99.0 1.3E-09 2.9E-14 56.3 5.9 37 6-42 3-39 (256)
208 PRK11908 NAD-dependent epimera 99.0 2.5E-09 5.4E-14 57.7 7.0 34 6-39 2-36 (347)
209 KOG1014 17 beta-hydroxysteroid 99.0 7.5E-10 1.6E-14 59.1 4.8 56 6-63 50-107 (312)
210 TIGR02685 pter_reduc_Leis pter 99.0 1.6E-09 3.6E-14 56.5 6.1 58 6-64 2-61 (267)
211 PRK08125 bifunctional UDP-gluc 99.0 1.9E-09 4.1E-14 62.4 6.8 37 4-40 314-351 (660)
212 PRK05693 short chain dehydroge 99.0 2E-09 4.3E-14 56.4 6.3 36 6-41 2-37 (274)
213 PLN00015 protochlorophyllide r 99.0 8.1E-10 1.8E-14 58.9 4.9 55 9-64 1-56 (308)
214 PRK07060 short chain dehydroge 99.0 2E-09 4.3E-14 55.3 6.1 38 4-41 8-45 (245)
215 PRK07832 short chain dehydroge 99.0 1.2E-09 2.6E-14 57.2 5.1 36 6-41 1-36 (272)
216 smart00822 PKS_KR This enzymat 99.0 5.4E-09 1.2E-13 51.0 7.1 59 6-64 1-62 (180)
217 PRK06484 short chain dehydroge 99.0 1.9E-09 4.2E-14 60.6 6.0 57 4-64 268-324 (520)
218 PRK10217 dTDP-glucose 4,6-dehy 99.0 5E-09 1.1E-13 56.5 7.1 58 6-64 2-60 (355)
219 COG0451 WcaG Nucleoside-diphos 99.0 2.2E-09 4.7E-14 56.8 5.6 36 7-42 2-37 (314)
220 TIGR02632 RhaD_aldol-ADH rhamn 99.0 3.1E-09 6.7E-14 61.8 6.5 60 4-64 413-474 (676)
221 PF08659 KR: KR domain; Inter 99.0 6.7E-09 1.5E-13 51.9 6.9 58 7-64 2-62 (181)
222 PLN02695 GDP-D-mannose-3',5'-e 99.0 2.7E-09 5.9E-14 58.2 5.8 37 3-39 19-55 (370)
223 PRK08324 short chain dehydroge 99.0 3.6E-09 7.8E-14 61.5 6.3 59 4-64 421-479 (681)
224 TIGR03466 HpnA hopanoid-associ 99.0 3.4E-09 7.3E-14 56.4 5.8 36 6-41 1-36 (328)
225 PLN02260 probable rhamnose bio 99.0 7.8E-09 1.7E-13 59.9 7.5 60 4-64 5-66 (668)
226 PF01370 Epimerase: NAD depend 99.0 9.7E-09 2.1E-13 52.4 7.1 35 8-42 1-35 (236)
227 KOG1611 Predicted short chain- 99.0 3.2E-09 6.9E-14 54.9 5.1 59 5-64 3-63 (249)
228 PRK12859 3-ketoacyl-(acyl-carr 99.0 7.7E-09 1.7E-13 53.8 6.7 62 3-64 4-77 (256)
229 PRK07041 short chain dehydroge 99.0 2.2E-09 4.8E-14 54.8 4.7 54 9-64 1-54 (230)
230 PRK06953 short chain dehydroge 98.9 4.3E-09 9.4E-14 53.7 5.6 36 6-41 2-37 (222)
231 PRK12742 oxidoreductase; Provi 98.9 7E-09 1.5E-13 53.1 6.1 36 3-38 4-39 (237)
232 PRK12320 hypothetical protein; 98.9 6E-09 1.3E-13 60.8 6.2 34 6-39 1-34 (699)
233 PRK07069 short chain dehydroge 98.9 8.9E-09 1.9E-13 53.1 6.2 31 8-38 2-32 (251)
234 COG1028 FabG Dehydrogenases wi 98.9 2E-08 4.3E-13 51.9 7.4 41 1-41 1-41 (251)
235 TIGR01746 Thioester-redct thio 98.9 5.2E-09 1.1E-13 56.2 5.4 35 7-41 1-37 (367)
236 KOG1429 dTDP-glucose 4-6-dehyd 98.9 1.9E-08 4.2E-13 53.7 7.0 58 4-63 26-83 (350)
237 COG1088 RfbB dTDP-D-glucose 4, 98.9 1.7E-08 3.6E-13 54.1 6.7 58 6-64 1-60 (340)
238 PRK12367 short chain dehydroge 98.9 6.6E-09 1.4E-13 54.1 5.2 36 4-39 13-48 (245)
239 PRK06997 enoyl-(acyl carrier p 98.9 7.3E-09 1.6E-13 54.1 5.4 35 4-38 5-41 (260)
240 PF01073 3Beta_HSD: 3-beta hyd 98.9 6.1E-09 1.3E-13 55.2 5.1 33 9-41 1-35 (280)
241 PRK09009 C factor cell-cell si 98.9 1.5E-08 3.3E-13 51.9 6.4 50 6-64 1-52 (235)
242 PRK07201 short chain dehydroge 98.9 9.5E-09 2.1E-13 59.1 6.0 58 6-64 1-60 (657)
243 COG1086 Predicted nucleoside-d 98.9 1.4E-08 3E-13 58.0 6.3 60 4-64 249-311 (588)
244 PLN02730 enoyl-[acyl-carrier-p 98.9 2E-08 4.4E-13 53.8 6.7 41 1-42 5-47 (303)
245 TIGR01181 dTDP_gluc_dehyt dTDP 98.9 1.5E-08 3.3E-13 53.6 6.2 57 7-64 1-59 (317)
246 TIGR03649 ergot_EASG ergot alk 98.9 6.7E-09 1.5E-13 54.7 4.8 35 7-41 1-35 (285)
247 PRK07577 short chain dehydroge 98.9 1.2E-08 2.5E-13 52.2 5.5 38 4-41 2-39 (234)
248 PRK08309 short chain dehydroge 98.9 1.6E-08 3.5E-13 50.6 5.6 55 6-64 1-56 (177)
249 KOG1200 Mitochondrial/plastidi 98.8 2.1E-08 4.6E-13 51.2 5.9 59 4-64 13-71 (256)
250 PRK10084 dTDP-glucose 4,6 dehy 98.8 2.6E-08 5.7E-13 53.7 6.6 58 6-64 1-59 (352)
251 TIGR01777 yfcH conserved hypot 98.8 1E-08 2.3E-13 53.8 4.5 35 8-42 1-35 (292)
252 TIGR01179 galE UDP-glucose-4-e 98.8 3.9E-08 8.5E-13 52.2 6.7 32 7-38 1-32 (328)
253 COG0702 Predicted nucleoside-d 98.8 3.5E-08 7.7E-13 51.3 6.1 38 6-43 1-38 (275)
254 PRK08261 fabG 3-ketoacyl-(acyl 98.8 6E-08 1.3E-12 54.0 6.3 36 4-39 209-244 (450)
255 PLN02996 fatty acyl-CoA reduct 98.7 1.5E-07 3.2E-12 53.3 7.6 39 4-42 10-51 (491)
256 KOG1430 C-3 sterol dehydrogena 98.7 1.2E-07 2.6E-12 52.0 6.9 60 4-64 3-64 (361)
257 PF07993 NAD_binding_4: Male s 98.7 6.6E-08 1.4E-12 50.4 5.7 55 10-64 1-69 (249)
258 PRK05865 hypothetical protein; 98.7 6.8E-08 1.5E-12 57.6 6.1 34 6-39 1-34 (854)
259 PLN00016 RNA-binding protein; 98.7 3.4E-08 7.5E-13 54.0 4.5 38 4-41 51-92 (378)
260 PF02719 Polysacc_synt_2: Poly 98.7 2.5E-08 5.4E-13 53.3 3.8 36 8-43 1-37 (293)
261 PLN02778 3,5-epimerase/4-reduc 98.7 6.6E-08 1.4E-12 51.6 5.3 33 5-37 9-41 (298)
262 PLN02503 fatty acyl-CoA reduct 98.7 1.8E-07 3.9E-12 54.2 7.1 39 4-42 118-159 (605)
263 PRK09987 dTDP-4-dehydrorhamnos 98.7 4.9E-08 1.1E-12 52.0 4.0 33 6-39 1-33 (299)
264 PRK11150 rfaD ADP-L-glycero-D- 98.6 8.8E-08 1.9E-12 50.9 4.8 32 8-39 2-33 (308)
265 COG1090 Predicted nucleoside-d 98.6 7.8E-08 1.7E-12 51.1 4.1 36 8-43 1-36 (297)
266 KOG1478 3-keto sterol reductas 98.6 1.7E-07 3.7E-12 49.7 5.2 60 4-64 2-70 (341)
267 TIGR01214 rmlD dTDP-4-dehydror 98.6 1.1E-07 2.4E-12 50.0 4.2 33 7-39 1-33 (287)
268 COG2910 Putative NADH-flavin r 98.6 2.1E-07 4.5E-12 47.1 4.9 38 6-43 1-38 (211)
269 PF05368 NmrA: NmrA-like famil 98.6 2.4E-07 5.2E-12 47.7 4.7 33 8-40 1-33 (233)
270 PRK13656 trans-2-enoyl-CoA red 98.5 8.6E-07 1.9E-11 49.2 6.7 33 5-38 41-75 (398)
271 PRK07578 short chain dehydroge 98.5 3.8E-07 8.1E-12 45.9 4.8 33 7-40 2-34 (199)
272 PRK06300 enoyl-(acyl carrier p 98.5 5E-07 1.1E-11 48.5 5.4 36 3-38 6-43 (299)
273 KOG1207 Diacetyl reductase/L-x 98.5 8.9E-07 1.9E-11 44.8 5.9 39 4-42 6-44 (245)
274 KOG1210 Predicted 3-ketosphing 98.5 5.1E-07 1.1E-11 48.8 4.7 59 6-64 34-93 (331)
275 PF04321 RmlD_sub_bind: RmlD s 98.5 5.1E-07 1.1E-11 48.1 4.8 37 6-42 1-37 (286)
276 KOG1610 Corticosteroid 11-beta 98.5 1.9E-06 4.2E-11 46.5 6.8 58 4-64 28-85 (322)
277 KOG1199 Short-chain alcohol de 98.4 2E-06 4.3E-11 43.6 6.2 57 4-64 8-64 (260)
278 KOG1209 1-Acyl dihydroxyaceton 98.4 1.8E-06 4E-11 44.9 6.1 39 4-42 6-45 (289)
279 COG3320 Putative dehydrogenase 98.4 1.5E-06 3.3E-11 47.9 6.1 59 6-64 1-69 (382)
280 TIGR02197 heptose_epim ADP-L-g 98.4 5E-07 1.1E-11 48.0 4.2 32 8-39 1-33 (314)
281 PRK12548 shikimate 5-dehydroge 98.4 1.4E-06 3E-11 46.6 5.5 35 4-39 125-160 (289)
282 TIGR02813 omega_3_PfaA polyket 98.4 1.3E-06 2.8E-11 56.9 6.1 34 5-38 1997-2031(2582)
283 cd01078 NAD_bind_H4MPT_DH NADP 98.4 1.6E-06 3.6E-11 43.8 5.2 40 3-42 26-65 (194)
284 COG1089 Gmd GDP-D-mannose dehy 98.3 4.8E-06 1E-10 44.9 6.1 60 5-64 2-64 (345)
285 COG1748 LYS9 Saccharopine dehy 98.3 2.7E-06 5.8E-11 47.2 5.3 54 6-64 2-56 (389)
286 PRK09620 hypothetical protein; 98.3 3.2E-06 6.9E-11 44.0 5.2 34 4-37 2-51 (229)
287 TIGR03443 alpha_am_amid L-amin 98.3 4.3E-06 9.4E-11 51.8 6.3 38 5-42 971-1012(1389)
288 PF13561 adh_short_C2: Enoyl-( 98.3 9.8E-07 2.1E-11 45.6 2.7 51 12-64 1-53 (241)
289 PRK14106 murD UDP-N-acetylmura 98.2 8.2E-06 1.8E-10 45.7 6.3 38 1-39 1-38 (450)
290 PRK05579 bifunctional phosphop 98.2 5.7E-06 1.2E-10 46.2 5.1 37 3-39 186-238 (399)
291 PRK02472 murD UDP-N-acetylmura 98.1 2.2E-05 4.7E-10 44.0 6.4 39 1-40 1-39 (447)
292 PLN02725 GDP-4-keto-6-deoxyman 98.1 2.7E-06 5.8E-11 45.1 2.6 29 9-37 1-29 (306)
293 PF01488 Shikimate_DH: Shikima 98.1 1.9E-05 4.1E-10 38.0 5.2 40 3-43 10-50 (135)
294 PLN02260 probable rhamnose bio 98.1 7.7E-06 1.7E-10 47.8 4.3 29 5-33 380-408 (668)
295 PRK14982 acyl-ACP reductase; P 98.0 1.1E-05 2.5E-10 44.2 4.0 40 3-42 153-194 (340)
296 PRK06849 hypothetical protein; 97.9 5E-05 1.1E-09 42.0 5.4 38 4-41 3-40 (389)
297 KOG1203 Predicted dehydrogenas 97.9 2.9E-05 6.2E-10 43.6 4.3 40 4-43 78-117 (411)
298 KOG1221 Acyl-CoA reductase [Li 97.9 0.00013 2.8E-09 41.7 6.6 39 4-42 11-52 (467)
299 TIGR01915 npdG NADPH-dependent 97.9 4.9E-05 1.1E-09 39.2 4.5 36 7-42 2-37 (219)
300 KOG2865 NADH:ubiquinone oxidor 97.8 0.00014 3.1E-09 39.6 5.9 35 5-39 61-95 (391)
301 PF03435 Saccharop_dh: Sacchar 97.8 6.9E-05 1.5E-09 41.4 4.6 53 8-64 1-55 (386)
302 PRK00258 aroE shikimate 5-dehy 97.8 6.1E-05 1.3E-09 40.2 4.0 38 4-42 122-160 (278)
303 cd01336 MDH_cytoplasmic_cytoso 97.8 0.00017 3.7E-09 39.4 5.6 36 5-40 2-44 (325)
304 COG0569 TrkA K+ transport syst 97.7 0.0003 6.5E-09 36.7 5.9 35 7-42 2-36 (225)
305 PRK06732 phosphopantothenate-- 97.7 0.00014 3.1E-09 37.9 4.7 34 6-39 17-50 (229)
306 PLN02520 bifunctional 3-dehydr 97.7 8.5E-05 1.8E-09 42.9 3.9 37 4-41 378-414 (529)
307 TIGR00715 precor6x_red precorr 97.7 0.00017 3.8E-09 38.3 4.7 36 6-42 1-36 (256)
308 COG1091 RfbD dTDP-4-dehydrorha 97.7 0.00014 3.1E-09 39.1 4.3 36 7-43 2-37 (281)
309 TIGR00507 aroE shikimate 5-deh 97.6 0.0003 6.5E-09 37.4 5.4 37 5-42 117-153 (270)
310 cd01075 NAD_bind_Leu_Phe_Val_D 97.6 0.00032 6.9E-09 36.0 5.3 38 3-41 26-63 (200)
311 PRK09496 trkA potassium transp 97.6 0.0005 1.1E-08 38.7 6.4 36 5-41 231-266 (453)
312 PRK08655 prephenate dehydrogen 97.6 0.00016 3.5E-09 40.9 4.4 36 6-41 1-36 (437)
313 TIGR00521 coaBC_dfp phosphopan 97.6 0.00026 5.6E-09 39.7 5.0 36 3-38 183-234 (390)
314 KOG0747 Putative NAD+-dependen 97.6 0.00025 5.4E-09 38.5 4.7 60 4-64 5-66 (331)
315 PRK09496 trkA potassium transp 97.6 0.00055 1.2E-08 38.5 6.2 35 6-41 1-35 (453)
316 PRK07819 3-hydroxybutyryl-CoA 97.5 0.00032 7E-09 37.7 4.6 42 1-43 1-42 (286)
317 cd01065 NAD_bind_Shikimate_DH 97.5 0.00027 5.9E-09 34.3 4.0 38 4-42 18-56 (155)
318 PF01118 Semialdhyde_dh: Semia 97.5 0.002 4.3E-08 30.5 7.0 33 7-39 1-35 (121)
319 TIGR02114 coaB_strep phosphopa 97.5 0.00037 8E-09 36.4 4.4 33 5-37 15-47 (227)
320 PRK06249 2-dehydropantoate 2-r 97.5 0.00075 1.6E-08 36.6 5.7 38 1-39 1-38 (313)
321 PF02737 3HCDH_N: 3-hydroxyacy 97.5 0.00026 5.7E-09 35.7 3.6 35 8-43 2-36 (180)
322 PRK14874 aspartate-semialdehyd 97.5 0.00052 1.1E-08 37.6 4.9 36 6-41 2-40 (334)
323 KOG1372 GDP-mannose 4,6 dehydr 97.5 0.0014 3.1E-08 35.3 6.2 43 6-48 29-71 (376)
324 PRK11199 tyrA bifunctional cho 97.4 0.0005 1.1E-08 38.2 4.6 35 5-39 98-132 (374)
325 COG0623 FabI Enoyl-[acyl-carri 97.4 0.0012 2.6E-08 35.0 5.6 60 3-64 4-65 (259)
326 COG2085 Predicted dinucleotide 97.4 0.00072 1.6E-08 35.1 4.7 33 9-41 4-36 (211)
327 PRK06129 3-hydroxyacyl-CoA deh 97.4 0.00068 1.5E-08 36.7 4.5 35 6-41 3-37 (308)
328 PRK04308 murD UDP-N-acetylmura 97.3 0.0016 3.5E-08 36.8 5.8 40 1-41 1-40 (445)
329 PRK08664 aspartate-semialdehyd 97.3 0.0011 2.4E-08 36.6 5.0 35 5-39 3-38 (349)
330 cd01080 NAD_bind_m-THF_DH_Cycl 97.3 0.0018 3.9E-08 32.5 5.2 40 3-42 42-81 (168)
331 PLN02968 Probable N-acetyl-gam 97.3 0.0012 2.7E-08 36.9 4.9 37 5-41 38-75 (381)
332 PRK06444 prephenate dehydrogen 97.3 0.00099 2.1E-08 34.2 4.2 28 7-34 2-29 (197)
333 PRK06718 precorrin-2 dehydroge 97.3 0.0013 2.8E-08 33.8 4.7 36 3-39 8-43 (202)
334 PF00056 Ldh_1_N: lactate/mala 97.2 0.0024 5.3E-08 31.1 5.3 37 6-42 1-39 (141)
335 PRK09310 aroDE bifunctional 3- 97.2 0.00073 1.6E-08 38.7 4.0 38 4-42 331-368 (477)
336 TIGR02853 spore_dpaA dipicolin 97.2 0.0019 4.2E-08 34.9 5.1 38 3-41 149-186 (287)
337 PF12242 Eno-Rase_NADH_b: NAD( 97.2 0.0025 5.4E-08 28.1 4.5 32 5-37 39-72 (78)
338 PRK00066 ldh L-lactate dehydro 97.2 0.01 2.2E-07 32.5 7.7 40 3-43 4-45 (315)
339 TIGR01470 cysG_Nterm siroheme 97.1 0.0064 1.4E-07 31.4 6.4 37 3-40 7-43 (205)
340 KOG2733 Uncharacterized membra 97.1 0.00096 2.1E-08 37.3 3.6 57 6-63 6-70 (423)
341 PF13241 NAD_binding_7: Putati 97.1 0.0014 3E-08 30.2 3.7 37 2-39 4-40 (103)
342 PRK00436 argC N-acetyl-gamma-g 97.1 0.0031 6.6E-08 34.9 5.4 33 6-38 3-36 (343)
343 PF01113 DapB_N: Dihydrodipico 97.1 0.0048 1E-07 29.4 5.5 34 6-39 1-36 (124)
344 PRK05671 aspartate-semialdehyd 97.1 0.0013 2.8E-08 36.3 3.8 29 1-30 1-29 (336)
345 PRK14188 bifunctional 5,10-met 97.1 0.003 6.6E-08 34.4 5.2 37 3-39 156-193 (296)
346 PRK06522 2-dehydropantoate 2-r 97.1 0.0021 4.5E-08 34.4 4.5 34 7-41 2-35 (304)
347 PRK04148 hypothetical protein; 97.1 0.0035 7.6E-08 30.5 4.8 35 5-41 17-51 (134)
348 KOG4039 Serine/threonine kinas 97.0 0.002 4.4E-08 33.1 3.9 35 4-38 17-53 (238)
349 cd08259 Zn_ADH5 Alcohol dehydr 97.0 0.0035 7.6E-08 33.6 4.9 36 5-40 163-198 (332)
350 cd05212 NAD_bind_m-THF_DH_Cycl 97.0 0.008 1.7E-07 29.4 5.7 37 3-39 26-62 (140)
351 PRK12549 shikimate 5-dehydroge 97.0 0.0052 1.1E-07 33.2 5.5 39 4-43 126-165 (284)
352 PRK05086 malate dehydrogenase; 97.0 0.0039 8.5E-08 34.1 5.0 35 6-40 1-38 (312)
353 PRK14175 bifunctional 5,10-met 97.0 0.0061 1.3E-07 33.1 5.6 38 3-40 156-193 (286)
354 PRK07530 3-hydroxybutyryl-CoA 97.0 0.0031 6.7E-08 33.9 4.6 36 6-42 5-40 (292)
355 cd08295 double_bond_reductase_ 97.0 0.0025 5.4E-08 34.6 4.2 37 5-41 152-188 (338)
356 PRK14192 bifunctional 5,10-met 97.0 0.0042 9.1E-08 33.6 5.0 37 3-39 157-193 (283)
357 PRK01438 murD UDP-N-acetylmura 96.9 0.0094 2E-07 34.1 6.6 35 4-39 15-49 (480)
358 PF03446 NAD_binding_2: NAD bi 96.9 0.0041 8.9E-08 30.8 4.6 35 7-42 3-37 (163)
359 PLN00106 malate dehydrogenase 96.9 0.0057 1.2E-07 33.7 5.4 35 5-39 18-54 (323)
360 COG0240 GpsA Glycerol-3-phosph 96.9 0.0048 1E-07 34.1 5.1 36 6-42 2-37 (329)
361 KOG1431 GDP-L-fucose synthetas 96.9 0.0083 1.8E-07 32.1 5.8 25 6-30 2-26 (315)
362 cd08294 leukotriene_B4_DH_like 96.9 0.0037 8E-08 33.6 4.5 36 5-40 144-179 (329)
363 TIGR02354 thiF_fam2 thiamine b 96.9 0.0037 8E-08 32.2 4.3 33 5-38 21-54 (200)
364 cd05294 LDH-like_MDH_nadp A la 96.9 0.0043 9.4E-08 33.8 4.8 34 6-39 1-36 (309)
365 PRK14194 bifunctional 5,10-met 96.9 0.0048 1E-07 33.7 4.9 38 3-40 157-194 (301)
366 COG5322 Predicted dehydrogenas 96.9 0.0055 1.2E-07 33.4 4.9 46 5-50 167-212 (351)
367 PRK09260 3-hydroxybutyryl-CoA 96.9 0.0027 5.8E-08 34.1 3.8 36 7-43 3-38 (288)
368 PF02254 TrkA_N: TrkA-N domain 96.9 0.0091 2E-07 27.7 5.2 33 8-41 1-33 (116)
369 PRK14619 NAD(P)H-dependent gly 96.8 0.008 1.7E-07 32.6 5.6 36 4-40 3-38 (308)
370 PRK07688 thiamine/molybdopteri 96.8 0.0047 1E-07 34.2 4.7 35 4-39 23-58 (339)
371 PRK05690 molybdopterin biosynt 96.8 0.0056 1.2E-07 32.4 4.8 34 4-38 31-65 (245)
372 PTZ00325 malate dehydrogenase; 96.8 0.0065 1.4E-07 33.5 5.0 35 4-38 7-43 (321)
373 TIGR02825 B4_12hDH leukotriene 96.8 0.0036 7.9E-08 33.8 4.1 36 5-40 139-174 (325)
374 PRK00094 gpsA NAD(P)H-dependen 96.8 0.0057 1.2E-07 33.1 4.7 35 6-41 2-36 (325)
375 cd05276 p53_inducible_oxidored 96.8 0.0072 1.6E-07 32.0 5.0 35 5-39 140-174 (323)
376 PRK08306 dipicolinate synthase 96.8 0.0081 1.7E-07 32.6 5.2 37 4-41 151-187 (296)
377 PF02826 2-Hacid_dh_C: D-isome 96.8 0.013 2.8E-07 29.5 5.7 37 4-41 35-71 (178)
378 PRK12475 thiamine/molybdopteri 96.8 0.0056 1.2E-07 33.9 4.6 35 4-39 23-58 (338)
379 cd05191 NAD_bind_amino_acid_DH 96.8 0.013 2.8E-07 26.1 5.2 33 4-37 22-55 (86)
380 cd05291 HicDH_like L-2-hydroxy 96.7 0.0068 1.5E-07 33.0 4.8 36 7-43 2-39 (306)
381 PRK07417 arogenate dehydrogena 96.7 0.0052 1.1E-07 32.9 4.3 34 7-41 2-35 (279)
382 cd08253 zeta_crystallin Zeta-c 96.7 0.0078 1.7E-07 31.9 4.9 35 5-39 145-179 (325)
383 PRK14027 quinate/shikimate deh 96.7 0.0041 8.8E-08 33.6 3.8 38 4-42 126-164 (283)
384 PRK14618 NAD(P)H-dependent gly 96.7 0.0066 1.4E-07 33.1 4.6 36 5-41 4-39 (328)
385 PRK11064 wecC UDP-N-acetyl-D-m 96.7 0.0054 1.2E-07 34.7 4.3 36 6-42 4-39 (415)
386 cd08293 PTGR2 Prostaglandin re 96.7 0.0045 9.8E-08 33.6 4.0 35 6-40 156-191 (345)
387 PRK08293 3-hydroxybutyryl-CoA 96.7 0.0075 1.6E-07 32.4 4.7 36 6-42 4-39 (287)
388 PF03721 UDPG_MGDP_dh_N: UDP-g 96.7 0.0044 9.6E-08 31.5 3.7 33 7-40 2-34 (185)
389 PLN02545 3-hydroxybutyryl-CoA 96.7 0.006 1.3E-07 32.9 4.3 36 6-42 5-40 (295)
390 TIGR01809 Shik-DH-AROM shikima 96.7 0.0046 1E-07 33.3 3.8 38 4-42 124-162 (282)
391 PLN03154 putative allyl alcoho 96.7 0.0047 1E-07 33.9 3.9 36 5-40 159-194 (348)
392 COG0287 TyrA Prephenate dehydr 96.7 0.013 2.9E-07 31.7 5.5 36 6-42 4-39 (279)
393 PF02882 THF_DHG_CYH_C: Tetrah 96.6 0.014 2.9E-07 29.3 5.1 39 3-41 34-72 (160)
394 KOG1198 Zinc-binding oxidoredu 96.6 0.014 3E-07 32.5 5.5 34 4-37 157-191 (347)
395 COG0604 Qor NADPH:quinone redu 96.6 0.0051 1.1E-07 33.8 3.7 35 5-39 143-177 (326)
396 PRK08268 3-hydroxy-acyl-CoA de 96.6 0.0076 1.7E-07 35.0 4.5 37 6-43 8-44 (507)
397 PLN02383 aspartate semialdehyd 96.6 0.013 2.9E-07 32.5 5.3 27 4-30 6-32 (344)
398 PRK06719 precorrin-2 dehydroge 96.6 0.009 1.9E-07 29.7 4.2 33 3-36 11-43 (157)
399 cd00704 MDH Malate dehydrogena 96.5 0.012 2.6E-07 32.4 4.9 33 7-39 2-41 (323)
400 PRK02006 murD UDP-N-acetylmura 96.5 0.03 6.6E-07 32.3 6.7 36 4-40 6-41 (498)
401 cd01483 E1_enzyme_family Super 96.5 0.011 2.4E-07 28.6 4.4 30 8-38 2-32 (143)
402 PRK05442 malate dehydrogenase; 96.5 0.017 3.7E-07 31.9 5.5 37 4-40 3-46 (326)
403 cd01338 MDH_choloroplast_like 96.5 0.019 4E-07 31.7 5.5 36 5-40 2-44 (322)
404 PRK06130 3-hydroxybutyryl-CoA 96.5 0.016 3.4E-07 31.4 5.2 36 6-42 5-40 (311)
405 cd08266 Zn_ADH_like1 Alcohol d 96.5 0.014 3E-07 31.3 5.0 35 5-39 167-201 (342)
406 cd08268 MDR2 Medium chain dehy 96.5 0.0082 1.8E-07 31.9 4.1 35 5-39 145-179 (328)
407 TIGR01850 argC N-acetyl-gamma- 96.5 0.011 2.5E-07 32.7 4.6 30 6-35 1-31 (346)
408 PRK14620 NAD(P)H-dependent gly 96.5 0.011 2.4E-07 32.2 4.6 33 7-40 2-34 (326)
409 COG0169 AroE Shikimate 5-dehyd 96.5 0.011 2.3E-07 32.1 4.4 38 5-43 126-164 (283)
410 PRK06035 3-hydroxyacyl-CoA deh 96.5 0.011 2.4E-07 31.8 4.5 36 6-42 4-39 (291)
411 TIGR01035 hemA glutamyl-tRNA r 96.5 0.0087 1.9E-07 33.9 4.2 37 4-41 179-216 (417)
412 PF01210 NAD_Gly3P_dh_N: NAD-d 96.4 0.01 2.2E-07 29.3 4.0 33 8-41 2-34 (157)
413 TIGR02356 adenyl_thiF thiazole 96.4 0.013 2.8E-07 30.2 4.4 34 4-38 20-54 (202)
414 TIGR01296 asd_B aspartate-semi 96.4 0.0067 1.4E-07 33.6 3.5 26 7-32 1-26 (339)
415 PRK07531 bifunctional 3-hydrox 96.4 0.011 2.3E-07 34.3 4.4 36 6-42 5-40 (495)
416 cd01485 E1-1_like Ubiquitin ac 96.4 0.011 2.4E-07 30.3 4.1 33 5-38 19-52 (198)
417 PLN02256 arogenate dehydrogena 96.4 0.021 4.6E-07 31.2 5.3 34 5-39 36-69 (304)
418 PRK07066 3-hydroxybutyryl-CoA 96.4 0.015 3.2E-07 32.1 4.7 36 6-42 8-43 (321)
419 PRK13243 glyoxylate reductase; 96.4 0.02 4.2E-07 31.7 5.2 36 4-40 149-184 (333)
420 cd01337 MDH_glyoxysomal_mitoch 96.4 0.018 3.8E-07 31.7 5.0 33 6-38 1-35 (310)
421 PRK05808 3-hydroxybutyryl-CoA 96.4 0.011 2.4E-07 31.6 4.2 35 7-42 5-39 (282)
422 PRK00141 murD UDP-N-acetylmura 96.4 0.012 2.6E-07 33.8 4.5 36 4-40 14-49 (473)
423 PRK10669 putative cation:proto 96.4 0.017 3.7E-07 33.8 5.1 35 7-42 419-453 (558)
424 PF12076 Wax2_C: WAX2 C-termin 96.4 0.01 2.2E-07 29.8 3.6 29 8-36 1-29 (164)
425 PRK06223 malate dehydrogenase; 96.3 0.02 4.4E-07 31.0 5.1 36 6-42 3-39 (307)
426 PRK05476 S-adenosyl-L-homocyst 96.3 0.019 4.1E-07 32.9 5.0 37 4-41 211-247 (425)
427 PRK08229 2-dehydropantoate 2-r 96.3 0.015 3.2E-07 31.9 4.6 33 6-39 3-35 (341)
428 cd05311 NAD_bind_2_malic_enz N 96.3 0.02 4.3E-07 30.1 4.8 35 3-38 23-60 (226)
429 PRK12749 quinate/shikimate deh 96.3 0.033 7.2E-07 30.3 5.7 36 4-40 123-159 (288)
430 TIGR02279 PaaC-3OHAcCoADH 3-hy 96.3 0.011 2.3E-07 34.5 4.0 37 6-43 6-42 (503)
431 cd00757 ThiF_MoeB_HesA_family 96.3 0.017 3.6E-07 30.2 4.5 33 5-38 21-54 (228)
432 PRK13940 glutamyl-tRNA reducta 96.3 0.0097 2.1E-07 33.8 3.8 38 4-42 180-218 (414)
433 TIGR02824 quinone_pig3 putativ 96.3 0.022 4.7E-07 30.3 4.9 35 5-39 140-174 (325)
434 PRK10792 bifunctional 5,10-met 96.3 0.033 7.2E-07 30.4 5.6 39 3-41 157-195 (285)
435 PRK12550 shikimate 5-dehydroge 96.3 0.0085 1.9E-07 32.3 3.4 36 6-42 123-159 (272)
436 cd08289 MDR_yhfp_like Yhfp put 96.3 0.018 3.8E-07 31.0 4.6 37 5-41 147-183 (326)
437 KOG0409 Predicted dehydrogenas 96.3 0.0076 1.6E-07 33.1 3.1 30 13-42 42-71 (327)
438 PTZ00117 malate dehydrogenase; 96.3 0.031 6.7E-07 30.7 5.5 38 4-42 4-42 (319)
439 PRK07502 cyclohexadienyl dehyd 96.2 0.021 4.6E-07 31.0 4.8 35 6-41 7-43 (307)
440 TIGR00978 asd_EA aspartate-sem 96.2 0.024 5.3E-07 31.4 5.0 31 7-37 2-33 (341)
441 PF04127 DFP: DNA / pantothena 96.2 0.041 8.8E-07 28.2 5.5 27 12-38 26-52 (185)
442 PRK11559 garR tartronate semia 96.2 0.02 4.3E-07 30.8 4.6 35 6-41 3-37 (296)
443 PRK08644 thiamine biosynthesis 96.2 0.021 4.5E-07 29.7 4.4 33 5-38 28-61 (212)
444 COG1064 AdhP Zn-dependent alco 96.2 0.026 5.7E-07 31.5 5.0 37 5-42 167-203 (339)
445 PRK05597 molybdopterin biosynt 96.2 0.022 4.9E-07 31.7 4.8 34 4-38 27-61 (355)
446 KOG4022 Dihydropteridine reduc 96.2 0.04 8.6E-07 28.2 5.2 37 5-41 3-39 (236)
447 cd08250 Mgc45594_like Mgc45594 96.2 0.018 3.9E-07 31.0 4.4 35 5-39 140-174 (329)
448 cd05292 LDH_2 A subgroup of L- 96.2 0.023 5.1E-07 31.0 4.8 35 7-42 2-38 (308)
449 PRK14179 bifunctional 5,10-met 96.2 0.02 4.4E-07 31.2 4.4 33 3-35 156-188 (284)
450 cd00650 LDH_MDH_like NAD-depen 96.2 0.019 4.2E-07 30.5 4.4 35 9-43 2-40 (263)
451 TIGR03201 dearomat_had 6-hydro 96.2 0.018 3.9E-07 31.6 4.3 36 5-41 167-202 (349)
452 PTZ00345 glycerol-3-phosphate 96.2 0.048 1E-06 30.7 5.9 35 5-40 11-52 (365)
453 TIGR01758 MDH_euk_cyt malate d 96.1 0.025 5.3E-07 31.3 4.7 35 7-41 1-42 (324)
454 cd01487 E1_ThiF_like E1_ThiF_l 96.1 0.027 5.8E-07 28.4 4.5 31 8-39 2-33 (174)
455 PRK12409 D-amino acid dehydrog 96.1 0.032 6.9E-07 31.2 5.2 32 7-39 3-34 (410)
456 PF03807 F420_oxidored: NADP o 96.1 0.014 3E-07 26.2 3.3 30 13-42 6-39 (96)
457 PRK13236 nitrogenase reductase 96.1 0.022 4.8E-07 30.9 4.4 40 1-40 1-45 (296)
458 PF00899 ThiF: ThiF family; I 96.1 0.02 4.4E-07 27.4 3.9 32 6-38 3-35 (135)
459 TIGR01759 MalateDH-SF1 malate 96.1 0.05 1.1E-06 30.1 5.8 36 4-39 2-44 (323)
460 PRK11880 pyrroline-5-carboxyla 96.1 0.023 4.9E-07 30.1 4.4 35 6-41 3-40 (267)
461 COG0665 DadA Glycine/D-amino a 96.1 0.04 8.7E-07 30.4 5.4 35 5-40 4-38 (387)
462 PRK12480 D-lactate dehydrogena 96.1 0.032 7E-07 30.8 5.0 36 4-40 145-180 (330)
463 cd05288 PGDH Prostaglandin deh 96.1 0.029 6.3E-07 30.2 4.8 35 5-39 146-180 (329)
464 PRK09880 L-idonate 5-dehydroge 96.0 0.026 5.6E-07 30.9 4.6 37 5-42 170-207 (343)
465 PRK14189 bifunctional 5,10-met 96.0 0.045 9.8E-07 29.9 5.3 36 3-38 156-191 (285)
466 COG0039 Mdh Malate/lactate deh 96.0 0.035 7.6E-07 30.7 4.9 37 6-43 1-39 (313)
467 COG0190 FolD 5,10-methylene-te 96.0 0.018 4E-07 31.3 3.8 37 3-39 154-190 (283)
468 PRK07236 hypothetical protein; 96.0 0.043 9.2E-07 30.6 5.4 36 4-40 5-40 (386)
469 cd01079 NAD_bind_m-THF_DH NAD 96.0 0.04 8.7E-07 28.6 4.9 34 3-36 60-93 (197)
470 PRK13982 bifunctional SbtC-lik 96.0 0.032 6.9E-07 32.5 4.9 34 3-36 254-303 (475)
471 cd05188 MDR Medium chain reduc 96.0 0.027 5.9E-07 29.2 4.4 35 5-40 135-169 (271)
472 PRK00045 hemA glutamyl-tRNA re 96.0 0.031 6.7E-07 31.8 4.9 38 4-42 181-219 (423)
473 PRK13886 conjugal transfer pro 96.0 0.029 6.4E-07 29.9 4.5 38 5-42 2-44 (241)
474 PLN00203 glutamyl-tRNA reducta 96.0 0.019 4.2E-07 33.6 4.1 39 3-42 264-303 (519)
475 PLN02712 arogenate dehydrogena 96.0 0.037 7.9E-07 33.4 5.3 35 4-39 368-402 (667)
476 PRK14177 bifunctional 5,10-met 96.0 0.02 4.3E-07 31.2 3.9 37 3-39 157-193 (284)
477 PRK14176 bifunctional 5,10-met 96.0 0.045 9.8E-07 29.9 5.2 38 3-40 162-199 (287)
478 PRK07494 2-octaprenyl-6-methox 96.0 0.032 6.9E-07 30.9 4.8 39 1-40 3-41 (388)
479 PRK08818 prephenate dehydrogen 96.0 0.039 8.4E-07 31.1 5.1 34 5-38 4-38 (370)
480 cd08270 MDR4 Medium chain dehy 96.0 0.026 5.5E-07 30.0 4.3 36 5-40 133-168 (305)
481 TIGR01772 MDH_euk_gproteo mala 96.0 0.03 6.4E-07 30.8 4.5 33 7-39 1-35 (312)
482 TIGR00872 gnd_rel 6-phosphoglu 95.9 0.019 4.1E-07 31.1 3.7 35 7-42 2-36 (298)
483 TIGR03026 NDP-sugDHase nucleot 95.9 0.018 3.9E-07 32.5 3.8 34 7-41 2-35 (411)
484 PRK08163 salicylate hydroxylas 95.9 0.048 1E-06 30.3 5.3 38 1-40 1-38 (396)
485 PRK14191 bifunctional 5,10-met 95.9 0.047 1E-06 29.8 5.1 35 3-37 155-189 (285)
486 cd08241 QOR1 Quinone oxidoredu 95.9 0.028 6E-07 29.8 4.3 35 5-39 140-174 (323)
487 PRK06728 aspartate-semialdehyd 95.9 0.053 1.1E-06 30.4 5.4 37 1-37 1-41 (347)
488 PTZ00082 L-lactate dehydrogena 95.9 0.061 1.3E-06 29.7 5.6 38 4-42 5-43 (321)
489 cd01492 Aos1_SUMO Ubiquitin ac 95.9 0.024 5.3E-07 29.1 3.9 33 5-38 21-54 (197)
490 TIGR00518 alaDH alanine dehydr 95.9 0.042 9.2E-07 30.8 5.0 36 5-41 167-202 (370)
491 cd08244 MDR_enoyl_red Possible 95.9 0.041 8.9E-07 29.5 4.9 35 5-39 143-177 (324)
492 cd08292 ETR_like_2 2-enoyl thi 95.9 0.03 6.6E-07 30.0 4.4 35 5-39 140-174 (324)
493 TIGR02822 adh_fam_2 zinc-bindi 95.9 0.039 8.4E-07 30.2 4.8 37 5-42 166-202 (329)
494 PRK12767 carbamoyl phosphate s 95.9 0.029 6.3E-07 30.5 4.3 34 6-41 2-37 (326)
495 KOG1204 Predicted dehydrogenas 95.9 0.0042 9E-08 32.9 1.0 26 5-30 6-31 (253)
496 PRK03659 glutathione-regulated 95.9 0.041 8.9E-07 32.7 5.1 36 6-42 401-436 (601)
497 PF00208 ELFV_dehydrog: Glutam 95.9 0.066 1.4E-06 28.5 5.4 33 3-36 30-62 (244)
498 PF00070 Pyr_redox: Pyridine n 95.8 0.052 1.1E-06 23.6 5.5 30 13-42 6-35 (80)
499 cd08243 quinone_oxidoreductase 95.8 0.029 6.3E-07 29.9 4.2 36 5-40 143-178 (320)
500 cd05213 NAD_bind_Glutamyl_tRNA 95.8 0.027 5.9E-07 30.8 4.1 38 4-42 177-215 (311)
No 1
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.60 E-value=1e-14 Score=77.88 Aligned_cols=61 Identities=66% Similarity=1.061 Sum_probs=53.3
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcch-hHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNA-EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di 64 (64)
.++.|+||||+|+||++++++|+++||.|....|++++.+. .++.++.....++..+..|+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL 66 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADL 66 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccc
Confidence 46789999999999999999999999999999999988554 46888877677788998886
No 2
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.44 E-value=6.4e-13 Score=68.66 Aligned_cols=63 Identities=21% Similarity=0.203 Sum_probs=47.7
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|++++++++|||+++++|.+++++|+++|++|++.+|++++.. ....++...+.++.++.+|+
T Consensus 2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~ 64 (254)
T PRK07478 2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELD-QLVAEIRAEGGEAVALAGDV 64 (254)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEcCC
Confidence 3456688999999999999999999999999999999875543 22333333345677787775
No 3
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.44 E-value=9.1e-13 Score=67.39 Aligned_cols=63 Identities=22% Similarity=0.109 Sum_probs=47.9
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|++++++++|||++|++|..++++|+++|++|++++|++.+.. .....+...+.++.++++|+
T Consensus 1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~ 63 (246)
T PRK05653 1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAE-ALAAELRAAGGEARVLVFDV 63 (246)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHHHHhcCCceEEEEccC
Confidence 5566688999999999999999999999999999999876543 22233333355677777774
No 4
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.44 E-value=6.2e-13 Score=69.66 Aligned_cols=61 Identities=28% Similarity=0.308 Sum_probs=48.6
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcC-CCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDG-AEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di 64 (64)
+++++++||||++|||.+++++|+++|++++++.|+.+++.. ..+++.. .+..++.+.+|+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~-la~~l~~~~~v~v~vi~~DL 65 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEA-LAKELEDKTGVEVEVIPADL 65 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHHHHHHhhCceEEEEECcC
Confidence 456789999999999999999999999999999999887753 2233322 246778888885
No 5
>PRK06194 hypothetical protein; Provisional
Probab=99.41 E-value=1.8e-12 Score=68.00 Aligned_cols=60 Identities=12% Similarity=0.110 Sum_probs=46.3
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++|++|++++++|+++|++|++++|+.+... +...++...+.++.++++|+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~ 64 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALD-RAVAELRAQGAEVLGVRTDV 64 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHHHhcCCeEEEEECCC
Confidence 4578999999999999999999999999999998765433 23333333345677888885
No 6
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.40 E-value=1.6e-12 Score=67.22 Aligned_cols=61 Identities=16% Similarity=0.129 Sum_probs=46.6
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||+++++|.+++++|+++|++|++.+|++++.+ +...++...+.++..+++|+
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~ 67 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALE-KLADEIGTSGGKVVPVCCDV 67 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHhcCCeEEEEEccC
Confidence 45688999999999999999999999999999999765543 22233333345677777775
No 7
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.40 E-value=2.2e-12 Score=66.31 Aligned_cols=62 Identities=24% Similarity=0.172 Sum_probs=47.4
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|...+++++|||++|++|.+++++|+++|++|++++|++.+.. .....+.. +.++.++++|+
T Consensus 1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~D~ 62 (251)
T PRK07231 1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAE-RVAAEILA-GGRAIAVAADV 62 (251)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHhc-CCeEEEEECCC
Confidence 5566789999999999999999999999999999999876543 22222222 44577888775
No 8
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.40 E-value=5.4e-12 Score=67.19 Aligned_cols=64 Identities=73% Similarity=1.158 Sum_probs=46.5
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcch-hHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNA-EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di 64 (64)
|+.++++++|||++|++|++++++|+++|++|++..|+..+... ..+........+++++.+|+
T Consensus 1 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 65 (322)
T PLN02986 1 MNGGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADL 65 (322)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCC
Confidence 45567899999999999999999999999999999987765322 22211111124677787775
No 9
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.40 E-value=1.4e-12 Score=67.35 Aligned_cols=63 Identities=22% Similarity=0.169 Sum_probs=47.0
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|-+.+++++|||++++||++++++|+++|++|++++|++.+.+ +...++...+.++.++.+|+
T Consensus 1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~ 63 (258)
T PRK07890 1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLD-EVAAEIDDLGRRALAVPTDI 63 (258)
T ss_pred CccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHHhCCceEEEecCC
Confidence 3346688999999999999999999999999999999765432 22233332245677777775
No 10
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.39 E-value=2e-12 Score=67.16 Aligned_cols=62 Identities=26% Similarity=0.155 Sum_probs=47.5
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|.+++++++|||++|++|.+++++|+++|++|++++|++.+.. +...++ ....++.++.+|+
T Consensus 1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~~~D~ 62 (263)
T PRK09072 1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLE-ALAARL-PYPGRHRWVVADL 62 (263)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHH-hcCCceEEEEccC
Confidence 5667789999999999999999999999999999999765432 222223 2245677888875
No 11
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.39 E-value=4.5e-12 Score=65.64 Aligned_cols=63 Identities=24% Similarity=0.143 Sum_probs=46.9
Q ss_pred CCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 2 SGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 2 ~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
.+++++++|||++++||++++++|+++|++|++.+|+..+...+..+++...+.++.++++|+
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~ 67 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADV 67 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCC
Confidence 345789999999999999999999999999999998764321123333333345677778775
No 12
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.39 E-value=1.8e-12 Score=68.61 Aligned_cols=61 Identities=21% Similarity=0.110 Sum_probs=45.8
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||++|++|.++++.|+++|++|++++|+.+..+ +..+++...+.++.++++|+
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~-~~~~~l~~~~~~~~~~~~Dl 98 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLD-AVADRITRAGGDAMAVPCDL 98 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEccC
Confidence 34578999999999999999999999999999999865443 22223322344567777775
No 13
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.39 E-value=4.3e-12 Score=64.96 Aligned_cols=64 Identities=20% Similarity=0.155 Sum_probs=46.4
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|++++++++|||++|++|++++++|++.|++|++..+++.+.......++...+.++.++.+|+
T Consensus 1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 64 (248)
T PRK05557 1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDV 64 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCC
Confidence 5566789999999999999999999999999988888665322122222322345677777764
No 14
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.39 E-value=2.1e-12 Score=66.62 Aligned_cols=62 Identities=26% Similarity=0.242 Sum_probs=46.4
Q ss_pred CCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 2 SGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 2 ~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++++|||+++++|.+++++|+++|++|++++|+..+.+ ...+++...+.++.++++|+
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~ 66 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQ-AVADAIVAAGGKAEALACHI 66 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEEcCC
Confidence 455688999999999999999999999999999998765433 22333333344567777774
No 15
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.39 E-value=2.3e-12 Score=66.56 Aligned_cols=61 Identities=20% Similarity=0.146 Sum_probs=47.0
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||++|++|.+++++|+++|++|++++|++++.. +....+...+.++..+.+|+
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~ 65 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGE-ETVALIREAGGEALFVACDV 65 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhcCCceEEEEcCC
Confidence 35689999999999999999999999999999999876543 22333333345677888775
No 16
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.39 E-value=2.3e-12 Score=66.65 Aligned_cols=60 Identities=25% Similarity=0.164 Sum_probs=45.7
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||+++++|++++++|+++|++|++.+|++.+.. +....+...+.++.++++|+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~i~~~~~~~~~~~~D~ 68 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLA-AAAESLKGQGLSAHALAFDV 68 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhcCceEEEEEccC
Confidence 4689999999999999999999999999999998765432 22233333345677777775
No 17
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.39 E-value=2.9e-12 Score=65.81 Aligned_cols=63 Identities=11% Similarity=0.116 Sum_probs=48.2
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|+++++.++|||+++++|.+++++|+++|++|++.+|++++.+ +..+++...+.++..+++|+
T Consensus 1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~-~~~~~i~~~~~~~~~~~~D~ 63 (227)
T PRK08862 1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALK-DTYEQCSALTDNVYSFQLKD 63 (227)
T ss_pred CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHhcCCCeEEEEccC
Confidence 6667889999999999999999999999999999999876543 23333333344566777774
No 18
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.38 E-value=2.5e-12 Score=68.61 Aligned_cols=61 Identities=20% Similarity=0.258 Sum_probs=46.6
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
..+++++|||++++||.+++++|+++|++|++.+|+..+.. ....++.....++.++++|+
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl 64 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAE-AAAQELGIPPDSYTIIHIDL 64 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHhhccCCceEEEEecC
Confidence 35688999999999999999999999999999998765443 23333322345678888885
No 19
>PLN02583 cinnamoyl-CoA reductase
Probab=99.38 E-value=7.4e-12 Score=66.30 Aligned_cols=61 Identities=41% Similarity=0.691 Sum_probs=44.7
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcch-hHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNA-EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di 64 (64)
.+++++|||++|++|++++++|+++|++|+++.|+..+... +.+..+.....+++++++|+
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl 66 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDP 66 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecC
Confidence 45789999999999999999999999999999986543221 22333322234677888875
No 20
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.38 E-value=3.5e-12 Score=65.96 Aligned_cols=60 Identities=18% Similarity=0.108 Sum_probs=46.9
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++|++|+++++.|+++|++|++.+|++.+.. +..+++...+.++.++++|+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl 65 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGAN-AVADEINKAGGKAIGVAMDV 65 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHH-HHHHHHHhcCceEEEEECCC
Confidence 4688999999999999999999999999999999875443 33333433355677788875
No 21
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.37 E-value=4.8e-12 Score=65.15 Aligned_cols=61 Identities=21% Similarity=0.181 Sum_probs=45.5
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|++++++++|||+++++|.+++++|+++|++|++++|+... +....+...+.++.++++|+
T Consensus 1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~---~~~~~~~~~~~~~~~~~~D~ 61 (248)
T TIGR01832 1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPS---ETQQQVEALGRRFLSLTADL 61 (248)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHH---HHHHHHHhcCCceEEEECCC
Confidence 45677899999999999999999999999999999986521 22222222244677777775
No 22
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.37 E-value=3.6e-12 Score=65.90 Aligned_cols=62 Identities=18% Similarity=0.067 Sum_probs=46.1
Q ss_pred CCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 2 SGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 2 ~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++.+++++|||+++++|.+++++|+++|++|++.+|++.+.. +...++...+.++.++.+|+
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl 67 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAE-LAVAKLRQEGIKAHAAPFNV 67 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHHHHHHhcCCeEEEEecCC
Confidence 345688999999999999999999999999999998765433 23333333344566677764
No 23
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.37 E-value=3.9e-12 Score=65.64 Aligned_cols=60 Identities=22% Similarity=0.094 Sum_probs=46.5
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++|++|++++++|+++|++|++++|++.+.. +...++...+.++.++.+|+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl 62 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAA-AAAEALQKAGGKAIGVAMDV 62 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEcCC
Confidence 4578999999999999999999999999999999876543 22233333345677888875
No 24
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.37 E-value=2.8e-12 Score=66.89 Aligned_cols=61 Identities=16% Similarity=0.114 Sum_probs=45.9
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcC-CCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDG-AEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di 64 (64)
+++++++|||++++||+++++.|+++|++|++.+|+.++.. +..+++.. .+.++..+++|+
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dv 67 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLK-KAREKIKSESNVDVSYIVADL 67 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhhcCCceEEEEecC
Confidence 45688999999999999999999999999999999765443 22222221 134677888875
No 25
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.36 E-value=5.7e-12 Score=65.24 Aligned_cols=61 Identities=21% Similarity=0.151 Sum_probs=47.6
Q ss_pred CCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 2 SGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 2 ~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++++|||++|++|++++++|+++|++|++.+|++.+. +...++...+.++.++.+|+
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~D~ 64 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD--EFAEELRALQPRAEFVQVDL 64 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH--HHHHHHHhcCCceEEEEccC
Confidence 45678999999999999999999999999999999887654 23333333355677888875
No 26
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.36 E-value=3.5e-12 Score=66.49 Aligned_cols=61 Identities=18% Similarity=0.113 Sum_probs=45.4
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||++|++|.+++++|+++|++|++++|++++.. +...++...+.++.++.+|+
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv 67 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVD-AAVAQLQQAGPEGLGVSADV 67 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhCCceEEEECCC
Confidence 45678999999999999999999999999999999865433 22223322234566777775
No 27
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.36 E-value=9.5e-12 Score=66.08 Aligned_cols=61 Identities=82% Similarity=1.215 Sum_probs=44.0
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcch-hHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNA-EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++|++|++++++|+++|++|++++|+...... ..+........+++++++|+
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 64 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANL 64 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccc
Confidence 45789999999999999999999999999999987654321 11111111124677887775
No 28
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.36 E-value=3.9e-12 Score=65.33 Aligned_cols=60 Identities=17% Similarity=0.085 Sum_probs=45.9
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++|++|.+++++|+++|++|++++|++.+.. .....+...+.++.++.+|+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl 64 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAA-ATAELVEAAGGKARARQVDV 64 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEECCC
Confidence 4678999999999999999999999999999999865433 23333333345677787774
No 29
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.36 E-value=5.3e-12 Score=65.01 Aligned_cols=61 Identities=16% Similarity=0.085 Sum_probs=45.3
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||++|++|.+++++|+++|++|++.+|++...+ ....++.....++.++.+|+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl 64 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAE-RVAKQIVADGGTAIAVQVDV 64 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEcCC
Confidence 46688999999999999999999999999999999765432 12222222234567777775
No 30
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.36 E-value=3.4e-12 Score=68.64 Aligned_cols=61 Identities=18% Similarity=0.143 Sum_probs=46.9
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+.+++++|||++++||++++++|+++|++|++.+|+++... +...++...+.++.++.+|+
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~-~~~~~~~~~g~~~~~~~~Dv 65 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQ-AVAEECRALGAEVLVVPTDV 65 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEeeC
Confidence 35688999999999999999999999999999999875543 23333333355677777775
No 31
>PLN02650 dihydroflavonol-4-reductase
Probab=99.36 E-value=1.1e-11 Score=66.69 Aligned_cols=64 Identities=59% Similarity=0.908 Sum_probs=45.2
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcch-hHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNA-EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di 64 (64)
|-...++++|||++|++|++++++|++.|++|++++|++..... ...........+++++.+|+
T Consensus 1 ~~~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl 65 (351)
T PLN02650 1 MGSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADL 65 (351)
T ss_pred CCCCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecC
Confidence 44456789999999999999999999999999999987654321 11111111123577777775
No 32
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.36 E-value=5.5e-12 Score=64.96 Aligned_cols=62 Identities=24% Similarity=0.214 Sum_probs=47.3
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|.+++++++|||++|++|.+++++|++.|++|++++|+.++.. .....+. .+.++.++++|+
T Consensus 1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~~-~~~~~~~~~~D~ 62 (252)
T PRK06138 1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAE-RVAAAIA-AGGRAFARQGDV 62 (252)
T ss_pred CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHH-HHHHHHh-cCCeEEEEEcCC
Confidence 5667889999999999999999999999999999999865433 2222222 245677787775
No 33
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.36 E-value=4.5e-12 Score=66.53 Aligned_cols=61 Identities=15% Similarity=0.020 Sum_probs=46.8
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++.++|||+++++|++++++|+++|++|++.+|++.... +...++...+.++.++.+|+
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~-~~~~~l~~~~~~~~~~~~Dv 64 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLR-QAVNHLRAEGFDVHGVMCDV 64 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEeCCC
Confidence 35678999999999999999999999999999998765443 23333433345677888885
No 34
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.35 E-value=5.9e-12 Score=65.22 Aligned_cols=59 Identities=15% Similarity=0.150 Sum_probs=44.2
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||++++||++++++|+++|++|++.+|+..+ +..+.+...+.++.++++|+
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~---~~~~~~~~~~~~~~~~~~Dl 64 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAP---ETQAQVEALGRKFHFITADL 64 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHH---HHHHHHHHcCCeEEEEEeCC
Confidence 456889999999999999999999999999998875422 22222222345677888875
No 35
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.35 E-value=7.1e-12 Score=64.32 Aligned_cols=64 Identities=23% Similarity=0.233 Sum_probs=46.7
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|+.++++++|||+++++|++++++|+++|++++++.++..+......+++...+.++.++++|+
T Consensus 1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 64 (245)
T PRK12937 1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADV 64 (245)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCC
Confidence 5667789999999999999999999999999988877543221122233333345677888775
No 36
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.35 E-value=9.1e-12 Score=64.11 Aligned_cols=62 Identities=23% Similarity=0.168 Sum_probs=44.7
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||++|++|.+++++|+++|++|++.+|+..+.......++...+.++.++++|+
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~ 65 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADL 65 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCC
Confidence 34588999999999999999999999999999988754321122222322245677777775
No 37
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.35 E-value=1.6e-11 Score=65.42 Aligned_cols=64 Identities=67% Similarity=1.079 Sum_probs=45.6
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcch-hHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNA-EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di 64 (64)
|.-.+++++|||++|+||++++++|+++|++|++..|++..... ...........+++++++|+
T Consensus 1 ~~~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 65 (325)
T PLN02989 1 MADGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADL 65 (325)
T ss_pred CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCC
Confidence 33456889999999999999999999999999998887754321 11111111124677888875
No 38
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.35 E-value=5.3e-12 Score=65.69 Aligned_cols=61 Identities=20% Similarity=0.176 Sum_probs=45.8
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||++|++|.+++++|+++|++|++++|++.+.+ .....+...+.++.++.+|+
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~ 68 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLD-EVAEQIRAAGRRAHVVAADL 68 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEccC
Confidence 34678999999999999999999999999999999765432 22222322245677777775
No 39
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.35 E-value=5.5e-12 Score=65.21 Aligned_cols=61 Identities=16% Similarity=0.109 Sum_probs=46.9
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||+++++|++++++|+++|++|++++|++++.. +...++...+.++.++.+|+
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl 69 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLE-AAVAALRAAGGAAEALAFDI 69 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHH-HHHHHHHhcCCceEEEEccC
Confidence 45789999999999999999999999999999999865443 22333333345677888875
No 40
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.35 E-value=5.5e-12 Score=65.97 Aligned_cols=60 Identities=23% Similarity=0.296 Sum_probs=45.8
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
.+++++|||+++++|++++++|+++|++|++++|+++..+ +...++...+.++.++++|+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl 68 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAE-AVVAEIKAAGGEALAVKADV 68 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEECCC
Confidence 4578999999999999999999999999999999765432 22333333345677888875
No 41
>PRK08589 short chain dehydrogenase; Validated
Probab=99.34 E-value=6.8e-12 Score=65.62 Aligned_cols=60 Identities=20% Similarity=0.114 Sum_probs=46.2
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||++++||.+++++|+++|++|++++|+ ++.. +...++...+.++..+++|+
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~-~~~~~~~~~~~~~~~~~~Dl 63 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVS-ETVDKIKSNGGKAKAYHVDI 63 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHH-HHHHHHHhcCCeEEEEEeec
Confidence 356889999999999999999999999999999997 3332 33344433345677888875
No 42
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.34 E-value=5.9e-12 Score=67.70 Aligned_cols=60 Identities=18% Similarity=0.129 Sum_probs=46.5
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||+++++|++++++|+++|++|++++|+++... +...++...+.++.++++|+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~-~~~~~l~~~g~~~~~v~~Dv 66 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLE-ALAAEIRAAGGEALAVVADV 66 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHHcCCcEEEEEecC
Confidence 4578999999999999999999999999999999765443 22333333356778888885
No 43
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.34 E-value=1.2e-11 Score=64.18 Aligned_cols=60 Identities=17% Similarity=0.186 Sum_probs=44.9
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||+++++|.+++++|+++|++|++++|+ .+.+ +..+.+...+.++.++++|+
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~D~ 72 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWD-ETRRLIEKEGRKVTFVQVDL 72 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHH-HHHHHHHhcCCceEEEEcCC
Confidence 356889999999999999999999999999999987 3322 22222222245678888885
No 44
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.34 E-value=8e-12 Score=66.63 Aligned_cols=61 Identities=23% Similarity=0.201 Sum_probs=47.0
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcC--CCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDG--AEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di 64 (64)
+++++++|||++++||.+++++|+++|++|++.+|+.++.. +...++.. .+.++.++++|+
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~-~~~~~l~~~~~~~~v~~~~~Dl 74 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGE-AAVAAIRTAVPDAKLSLRALDL 74 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhCCCCceEEEEecC
Confidence 35688999999999999999999999999999999876543 23333321 234678888885
No 45
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.33 E-value=1.5e-11 Score=64.42 Aligned_cols=63 Identities=16% Similarity=0.116 Sum_probs=46.5
Q ss_pred CCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcch------hHHhhhcCCCCceEEEEccC
Q 036468 2 SGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNA------EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 2 ~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~~Di 64 (64)
.+++++++|||+++++|.+++++|+++|++|++++|+.++... +...++...+.++.++++|+
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~ 71 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDV 71 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecC
Confidence 3556889999999999999999999999999999997653210 11222333345677888875
No 46
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.33 E-value=8.6e-12 Score=64.68 Aligned_cols=60 Identities=22% Similarity=0.191 Sum_probs=45.9
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcC--CCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDG--AEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di 64 (64)
++++++|||++++||.+++++|+++|++|++++|++++.. +...++.. .+.++.++++|+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl 67 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAE-RAAAAIARDVAGARVLAVPADV 67 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhccCCceEEEEEccC
Confidence 4688999999999999999999999999999999765443 22233322 245677888875
No 47
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.33 E-value=1.5e-11 Score=63.56 Aligned_cols=60 Identities=18% Similarity=0.153 Sum_probs=44.3
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
.++++|||++|++|.+++++|+++|++|++++|+..+...+..+.+...+.++.++++|+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~ 61 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADV 61 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecC
Confidence 367999999999999999999999999999998653321122333333345678888875
No 48
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.33 E-value=1.6e-11 Score=63.83 Aligned_cols=60 Identities=18% Similarity=0.180 Sum_probs=45.0
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|.+++++++|||++++||.+++++|+++|++|++.+|+.+.. +.+.+. .+.++.++++|+
T Consensus 1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~--~~l~~~--~~~~~~~~~~D~ 60 (262)
T TIGR03325 1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGL--QELEAA--HGDAVVGVEGDV 60 (262)
T ss_pred CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHhh--cCCceEEEEecc
Confidence 566778999999999999999999999999999999876433 222211 134566777764
No 49
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.32 E-value=9.6e-12 Score=63.63 Aligned_cols=60 Identities=30% Similarity=0.316 Sum_probs=44.8
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|+|++|++|++++++|+++|++|++++|++.+.. +...++... .++.++++|+
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~-~~~~~l~~~-~~~~~~~~D~ 63 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELE-EAAAELNNK-GNVLGLAADV 63 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHH-HHHHHHhcc-CcEEEEEccC
Confidence 34578999999999999999999999999999999765432 222333221 4577777774
No 50
>PRK08643 acetoin reductase; Validated
Probab=99.32 E-value=1e-11 Score=64.23 Aligned_cols=59 Identities=22% Similarity=0.162 Sum_probs=44.8
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++|||+++++|.+++++|+++|++|++++|++++.. +...++...+.++.++++|+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl 60 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQ-AAADKLSKDGGKAIAVKADV 60 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEECCC
Confidence 468999999999999999999999999999998765443 22223333345677788875
No 51
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.32 E-value=1.2e-11 Score=64.35 Aligned_cols=61 Identities=20% Similarity=0.098 Sum_probs=46.5
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+.+++++|||+++++|.+++++|+++|++|++.+|++++.. +....+...+.++.++++|+
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl 68 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVD-KGLAAYRELGIEAHGYVCDV 68 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHHHHhcCCceEEEEcCC
Confidence 34678999999999999999999999999999988765443 23333333345678888875
No 52
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1.9e-11 Score=63.51 Aligned_cols=60 Identities=8% Similarity=0.135 Sum_probs=45.3
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeCCCC-cchhHHhhhcCC-CCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS-YTVKATVRDLNN-HNAEHLLTLDGA-EERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~~~-~~~~~~~~~~~~-~~~~~~~~~Di 64 (64)
++++++|||+++++|++++++|+++| ++|++++|++++ .. ...+++... ..+++++++|+
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~-~~~~~l~~~~~~~v~~~~~D~ 69 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRD-AAVAQMKAAGASSVEVIDFDA 69 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHH-HHHHHHHhcCCCceEEEEecC
Confidence 46789999999999999999999985 899999998765 32 223333322 23678888885
No 53
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.32 E-value=8.4e-12 Score=65.13 Aligned_cols=42 Identities=24% Similarity=0.096 Sum_probs=37.1
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
|++++++++|||++|++|.+++++|+++|++|++.+|++++.
T Consensus 1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~ 42 (273)
T PRK07825 1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALA 42 (273)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 566778999999999999999999999999999999876543
No 54
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.31 E-value=2.4e-11 Score=64.24 Aligned_cols=61 Identities=18% Similarity=0.205 Sum_probs=45.3
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||+++++|.+++++|+++|++|++++|+...........+...+.++.++.+|+
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl 105 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDV 105 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccC
Confidence 4578999999999999999999999999999998764322122222333345677888875
No 55
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.31 E-value=1.1e-11 Score=64.19 Aligned_cols=61 Identities=20% Similarity=0.127 Sum_probs=45.5
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||++|++|.+++++|+++|++|++++|+.++.. .....+...+.++.++++|+
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~i~~~~~~~~~~~~Dl 70 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELE-EAAAHLEALGIDALWIAADV 70 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEEccC
Confidence 35688999999999999999999999999999998765432 22222323345667777775
No 56
>PLN02214 cinnamoyl-CoA reductase
Probab=99.31 E-value=3.1e-11 Score=65.04 Aligned_cols=61 Identities=57% Similarity=0.952 Sum_probs=44.5
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++|++|++++++|+++|++|++++|+.+......+..+.....+++++++|+
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl 69 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADL 69 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCc
Confidence 4578999999999999999999999999999999765432122222222223577777775
No 57
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.31 E-value=1.4e-11 Score=63.28 Aligned_cols=60 Identities=12% Similarity=0.078 Sum_probs=45.0
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|+|++|++|..++++|+++|++|++++|++++.. .....+...+.++.++++|+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~ 64 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALE-ALAAELRSTGVKAAAYSIDL 64 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhCCCcEEEEEccC
Confidence 3468999999999999999999999999999999765432 22222222245677888875
No 58
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.31 E-value=1.3e-11 Score=65.51 Aligned_cols=60 Identities=20% Similarity=0.214 Sum_probs=45.4
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhc--CCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLD--GAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Di 64 (64)
++++++|||++++||.+++++|+++|++|++.+|+..+.. ....++. ..+.++.++++|+
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dl 76 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGK-AAAARITAATPGADVTLQELDL 76 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhCCCCceEEEECCC
Confidence 5678999999999999999999999999999999765543 2222222 1235677888885
No 59
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.31 E-value=2.2e-11 Score=63.13 Aligned_cols=62 Identities=15% Similarity=0.128 Sum_probs=43.9
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
.++++++|||+++++|.+++++|++.|++|++.++...........++...+.++.++.+|+
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 68 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADL 68 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCC
Confidence 34678999999999999999999999999988776432211122222322345677888875
No 60
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.31 E-value=1.9e-11 Score=63.57 Aligned_cols=58 Identities=24% Similarity=0.272 Sum_probs=44.5
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||+++++|++++++|+++|++|++.+|++++.. +...++ +.++.++++|+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dl 61 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGA-AVAASL---GERARFIATDI 61 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCeeEEEEecC
Confidence 45689999999999999999999999999999999865432 122222 34567777775
No 61
>PRK06720 hypothetical protein; Provisional
Probab=99.30 E-value=2.1e-11 Score=60.51 Aligned_cols=61 Identities=20% Similarity=0.092 Sum_probs=45.3
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++.++|||+++++|.+++..|++.|++|++++++..... ....++...+.+..++.+|+
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl 74 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQ-ATVEEITNLGGEALFVSYDM 74 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEccC
Confidence 45688999999999999999999999999999998765432 22233333344566777774
No 62
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.30 E-value=1.5e-11 Score=63.13 Aligned_cols=60 Identities=18% Similarity=0.149 Sum_probs=45.3
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++|++|.+++++|+++|++|++++|++.+.. +...++...+.++.++.+|+
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~ 65 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLK-AVAEEVEAYGVKVVIATADV 65 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhCCeEEEEECCC
Confidence 4578999999999999999999999999999999865433 22223333345677777774
No 63
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.30 E-value=2.3e-11 Score=63.26 Aligned_cols=61 Identities=28% Similarity=0.248 Sum_probs=45.7
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcC--CCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDG--AEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di 64 (64)
++++.++|||+++++|.+++++|+++|++|++++|++++... ...++.. .+.++..+.+|+
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~ 68 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLAS-AEARLREKFPGARLLAARCDV 68 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHHHhhCCCceEEEEEecC
Confidence 346889999999999999999999999999999998765432 2222222 134677777775
No 64
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.30 E-value=1.8e-11 Score=62.81 Aligned_cols=63 Identities=29% Similarity=0.229 Sum_probs=46.0
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEE-EeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKAT-VRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|.+++++++|+|++|++|.+++++|++.|++|+++ .|++++.. .....+...+.++.++.+|+
T Consensus 1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~ 64 (247)
T PRK05565 1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQ-ELLEEIKEEGGDAIAVKADV 64 (247)
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHHhcCCeEEEEECCC
Confidence 45667899999999999999999999999999998 77655432 22222222244567777774
No 65
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.30 E-value=1.4e-11 Score=63.88 Aligned_cols=58 Identities=22% Similarity=0.223 Sum_probs=43.7
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++|||+++++|.++++.|++.|++|++++|++++.. +...++...+ ++.++++|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~-~~~~~~~Dl 59 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQ-AFAARLPKAA-RVSVYAADV 59 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHhcccCC-eeEEEEcCC
Confidence 368999999999999999999999999999998765432 2222222222 677888875
No 66
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.30 E-value=1.8e-11 Score=63.42 Aligned_cols=59 Identities=25% Similarity=0.118 Sum_probs=44.1
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||+++++|++++++|+++|++|++++|++.. . ....++...+.++.++++|+
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~-~~~~~~~~~~~~~~~~~~D~ 65 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELV-H-EVAAELRAAGGEALALTADL 65 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHH-H-HHHHHHHhcCCeEEEEEEeC
Confidence 46789999999999999999999999999999987421 1 22333333345667777774
No 67
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.30 E-value=1.9e-11 Score=62.59 Aligned_cols=62 Identities=23% Similarity=0.196 Sum_probs=45.8
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|.+++++++|+|++|++|.++++.|+++|++|++.+|++.+.+ ....+... ..++.++++|+
T Consensus 1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~Dl 62 (238)
T PRK05786 1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLK-RMKKTLSK-YGNIHYVVGDV 62 (238)
T ss_pred CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHh-cCCeEEEECCC
Confidence 5556789999999999999999999999999999999765432 11122222 23567777775
No 68
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.30 E-value=2.4e-11 Score=63.58 Aligned_cols=60 Identities=22% Similarity=0.254 Sum_probs=44.4
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhc--CCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLD--GAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Di 64 (64)
+++.++|||++|++|.++++.|+++|++|++++|+++.... ...... ....++.++.+|+
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~ 63 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQEN-LLSQATQLNLQQNIKVQQLDV 63 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHHHHHhcCCCCceeEEecCC
Confidence 35679999999999999999999999999999998755432 111111 1134677888875
No 69
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.29 E-value=2.9e-11 Score=64.31 Aligned_cols=62 Identities=19% Similarity=0.058 Sum_probs=46.2
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||++++||.+++++|+++|++|++.++.......+...++...+.++.++.+|+
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv 71 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDI 71 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCC
Confidence 45789999999999999999999999999999887543221123333433356778888875
No 70
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.29 E-value=2e-11 Score=62.78 Aligned_cols=63 Identities=17% Similarity=0.190 Sum_probs=47.1
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|.+.+++++|+|++|++|.++++.|+++|+.|++++|++.+.+ ....++...+.++.++++|+
T Consensus 1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~ 63 (253)
T PRK08217 1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLE-EAVAECGALGTEVRGYAANV 63 (253)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCceEEEEcCC
Confidence 5556788999999999999999999999999999998765433 22233333345677777774
No 71
>PLN02240 UDP-glucose 4-epimerase
Probab=99.29 E-value=4.6e-11 Score=64.18 Aligned_cols=64 Identities=28% Similarity=0.337 Sum_probs=45.5
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcch--hHHhhhc-CCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNA--EHLLTLD-GAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~--~~~~~~~-~~~~~~~~~~~Di 64 (64)
|++++++++|||++|++|++++++|+++|++|++++|....... ..+.... ....++.++.+|+
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 67 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDL 67 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCc
Confidence 67778899999999999999999999999999999875433211 1222211 1134567777774
No 72
>PRK12743 oxidoreductase; Provisional
Probab=99.29 E-value=2.9e-11 Score=62.71 Aligned_cols=60 Identities=17% Similarity=0.119 Sum_probs=43.8
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++|||+++++|.+++++|+++|++|++.+++..+.......++...+.++.++++|+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 61 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDL 61 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccC
Confidence 468999999999999999999999999988876433221122333333456778888875
No 73
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.29 E-value=1.7e-11 Score=63.04 Aligned_cols=58 Identities=14% Similarity=0.088 Sum_probs=44.2
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhc-CCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLD-GAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Di 64 (64)
++++|||++|++|.+++++|++.|++|++++|++++.+ ...+.+. ..+.++.++++|+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dl 60 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLE-RLADDLRARGAVAVSTHELDI 60 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHH-HHHHHHHHhcCCeEEEEecCC
Confidence 57999999999999999999999999999999875443 2222221 2245788888885
No 74
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.28 E-value=2.4e-11 Score=62.89 Aligned_cols=61 Identities=13% Similarity=0.093 Sum_probs=45.3
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||+++++|.+++++|+++|++|++.+|+....+ ....++...+.++.++.+|+
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~ 69 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAAN-HVVDEIQQLGGQAFACRCDI 69 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEccC
Confidence 34689999999999999999999999999999988765432 12222222345677777775
No 75
>PLN02253 xanthoxin dehydrogenase
Probab=99.28 E-value=2.8e-11 Score=63.36 Aligned_cols=59 Identities=22% Similarity=0.211 Sum_probs=44.7
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++++||++++++|+++|++|++++|++.... +...++. ...++.++++|+
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~Dl 75 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQ-NVCDSLG-GEPNVCFFHCDV 75 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHhc-CCCceEEEEeec
Confidence 4678999999999999999999999999999998754332 2222232 234677888875
No 76
>PRK06128 oxidoreductase; Provisional
Probab=99.28 E-value=3.2e-11 Score=63.93 Aligned_cols=61 Identities=11% Similarity=0.125 Sum_probs=44.7
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcch-hHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNA-EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++++||++++++|+++|++|++.+++.+.... +....+...+.++.++.+|+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 115 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDL 115 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCC
Confidence 35789999999999999999999999999988876543221 22223333355677888875
No 77
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.28 E-value=2.7e-11 Score=62.41 Aligned_cols=59 Identities=10% Similarity=0.071 Sum_probs=44.4
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhc--CCCCceEEEEccC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLD--GAEERLHLFKANS 64 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Di 64 (64)
+++++|||+++++|++++++|+++|++|++.+|++.+.+. ....+. .++.++.++++|+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~ 62 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEE-LKAELLARYPGIKVAVAALDV 62 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHHhhCCCceEEEEEcCC
Confidence 4679999999999999999999999999999998755432 112221 1245678888875
No 78
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.28 E-value=1.8e-11 Score=62.36 Aligned_cols=42 Identities=26% Similarity=0.259 Sum_probs=38.0
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
|..++..++|||+++|||.+++++|.+.|.+|++++|+...+
T Consensus 1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L 42 (245)
T COG3967 1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERL 42 (245)
T ss_pred CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHH
Confidence 667788999999999999999999999999999999976544
No 79
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.28 E-value=4.1e-11 Score=63.88 Aligned_cols=62 Identities=23% Similarity=0.101 Sum_probs=45.2
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc--------ch-hHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH--------NA-EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~--------~~-~~~~~~~~~~~~~~~~~~Di 64 (64)
++++.++|||++++||.+++++|++.|++|++.+|+..+. .. ...+.+...+.++.++++|+
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv 76 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDH 76 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCC
Confidence 3568999999999999999999999999999999974321 11 12223333345677788885
No 80
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.27 E-value=3.8e-11 Score=62.08 Aligned_cols=40 Identities=28% Similarity=0.286 Sum_probs=36.0
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
|++++++++|||+++++|++++++|+++|++|++++|+++
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~ 41 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAP 41 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChh
Confidence 4556789999999999999999999999999999998764
No 81
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.27 E-value=6.3e-11 Score=63.53 Aligned_cols=60 Identities=45% Similarity=0.718 Sum_probs=43.4
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcch-hHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNA-EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di 64 (64)
.+++++|||++|++|++++++|+++|++|++++|++..... .....+.. ..+++++.+|+
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl 68 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADL 68 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCC
Confidence 46789999999999999999999999999988887654321 11112211 13577788775
No 82
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.27 E-value=2.3e-11 Score=62.59 Aligned_cols=60 Identities=15% Similarity=0.129 Sum_probs=44.8
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++|++|++++++|+++|++|++++|+++... +....+...+.++.++++|+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~d~ 61 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAE-KVAADIRAKGGNAQAFACDI 61 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHH-HHHHHHHhcCCcEEEEEcCC
Confidence 4578999999999999999999999999999998765432 12222222245677777774
No 83
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.27 E-value=2.7e-11 Score=62.98 Aligned_cols=58 Identities=17% Similarity=0.190 Sum_probs=43.1
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||++++||.+++++|+++|++|++.+|+++... +...++ ..++.++++|+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~ 61 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLA-SLRQRF---GDHVLVVEGDV 61 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCcceEEEccC
Confidence 45689999999999999999999999999999998765432 111222 23456666664
No 84
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.27 E-value=4.4e-11 Score=61.60 Aligned_cols=62 Identities=21% Similarity=0.085 Sum_probs=42.8
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||++|++|++++++|+++|++|++..++...........+...+.++.++.+|+
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 65 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADV 65 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEecc
Confidence 45688999999999999999999999999988776443211122233333234566666664
No 85
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.27 E-value=3.4e-11 Score=62.39 Aligned_cols=58 Identities=17% Similarity=0.072 Sum_probs=43.8
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||+++++|.++++.|+++|++|++++|+..... +...++ ..++.++++|+
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~ 61 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARAR-LAALEI---GPAAIAVSLDV 61 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHHHHh---CCceEEEEccC
Confidence 45688999999999999999999999999999998765432 122222 23466777774
No 86
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.27 E-value=3.1e-11 Score=62.15 Aligned_cols=54 Identities=20% Similarity=0.196 Sum_probs=41.1
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++|||++|++|.+++++|+++|++|++++|+++.. +.+.+ ...++.++++|+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~---~~~~~~~~~~D~ 55 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVL--DELHT---QSANIFTLAFDV 55 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHH--HHHHH---hcCCCeEEEeeC
Confidence 5799999999999999999999999999999975432 22221 124567777775
No 87
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.27 E-value=3.5e-11 Score=61.86 Aligned_cols=60 Identities=23% Similarity=0.175 Sum_probs=45.1
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++|++|++++++|+++|++|++++|++++... ...++...+.++.++.+|+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl 65 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARE-LAAALEAAGGRAHAIAADL 65 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEccC
Confidence 45889999999999999999999999999999887654432 2223322245677777774
No 88
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.27 E-value=4.5e-11 Score=64.23 Aligned_cols=59 Identities=24% Similarity=0.438 Sum_probs=42.1
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhc-----CCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLD-----GAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~Di 64 (64)
++++||||+|++|++++++|++.|++|++++|++.......+..+. ....+++++++|+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 64 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDL 64 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEecc
Confidence 4799999999999999999999999999999876432111111111 1124577888875
No 89
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.26 E-value=3.3e-11 Score=64.33 Aligned_cols=60 Identities=18% Similarity=0.250 Sum_probs=45.6
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS-YTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+.++++|||++++||.+++++|+++| ++|++.+|+.++.. +...++...+.++.++.+|+
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl 62 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAE-QAAKSLGMPKDSYTIMHLDL 62 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHH-HHHHHhcCCCCeEEEEEcCC
Confidence 35789999999999999999999999 99999998765443 23333333345677788875
No 90
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.26 E-value=3.3e-11 Score=62.94 Aligned_cols=61 Identities=15% Similarity=0.079 Sum_probs=44.9
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcC--CCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDG--AEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di 64 (64)
+++++++|||++|++|.+++++|+++|++|++++|++.+... ...++.. .+.++.++.+|+
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~Dl 67 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAA-AAEEIEALKGAGAVRYEPADV 67 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHHHhccCCCceEEEEcCC
Confidence 456899999999999999999999999999999987654321 2222221 134677777775
No 91
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=99.26 E-value=5.1e-11 Score=62.79 Aligned_cols=62 Identities=24% Similarity=0.163 Sum_probs=48.1
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcch--hHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNA--EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Di 64 (64)
..++.++|||++++||+++++.|++.|.+|++.+|+.+.... ..+......+.++..+.+|+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 69 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDV 69 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcC
Confidence 467899999999999999999999999999999998876543 22222222345677888875
No 92
>PRK07985 oxidoreductase; Provisional
Probab=99.26 E-value=5.6e-11 Score=62.95 Aligned_cols=61 Identities=13% Similarity=0.151 Sum_probs=43.9
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhh-hcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLT-LDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~Di 64 (64)
++++++|||++++||.+++++|+++|++|++.+++.+....+.+.+ +...+.++.++.+|+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 109 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDL 109 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccC
Confidence 3478999999999999999999999999999887644322122222 223345677788875
No 93
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.26 E-value=6.1e-11 Score=63.98 Aligned_cols=59 Identities=51% Similarity=0.788 Sum_probs=43.5
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
..++++|||++|++|++++++|+++|++|++++|++.+.. .....+.. ..+++++.+|+
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~Dl 67 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSL-HLLSKWKE-GDRLRLFRADL 67 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHhhcc-CCeEEEEECCC
Confidence 3578999999999999999999999999999988754332 12222211 34677777775
No 94
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.26 E-value=2.9e-11 Score=63.97 Aligned_cols=61 Identities=28% Similarity=0.285 Sum_probs=47.3
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcch--hHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNA--EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Di 64 (64)
..++.++||||++|||.+++.+++++|.+++.+.|....++. +.+.+..... ++..+++|+
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~-~v~~~~~Dv 72 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE-KVLVLQLDV 72 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC-ccEEEeCcc
Confidence 357899999999999999999999999999888887766643 3333333323 688888886
No 95
>PRK05717 oxidoreductase; Validated
Probab=99.26 E-value=4.2e-11 Score=62.03 Aligned_cols=58 Identities=21% Similarity=0.209 Sum_probs=43.7
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
.++++++|||++|++|++++++|+++|++|+++++++.+.. +..+++ +.++.++++|+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~-~~~~~~---~~~~~~~~~Dl 65 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGS-KVAKAL---GENAWFIAMDV 65 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHH-HHHHHc---CCceEEEEccC
Confidence 45688999999999999999999999999999988764332 111222 34567777775
No 96
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.26 E-value=3e-11 Score=62.44 Aligned_cols=61 Identities=23% Similarity=0.261 Sum_probs=45.4
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+.+++++|||++|++|++++++|+++|++|++++|++++.+ +....+.....++.++.+|+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~ 67 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLK-ELRAEIEAEGGAAHVVSLDV 67 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEecC
Confidence 35689999999999999999999999999999999765543 22222322234567777774
No 97
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.26 E-value=2.3e-11 Score=63.13 Aligned_cols=57 Identities=25% Similarity=0.169 Sum_probs=42.8
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|+++|||+++++|++++++|+++|++|++.+|+++... +...++... .++.++++|+
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~-~~~~~~~~Dv 57 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLE-KALKELKEY-GEVYAVKADL 57 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhc-CCceEEEcCC
Confidence 46999999999999999999999999999998765443 222333222 2567777775
No 98
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.26 E-value=6.9e-11 Score=61.55 Aligned_cols=62 Identities=16% Similarity=0.048 Sum_probs=44.5
Q ss_pred CCCeEEEEecCc--chHHHHHHHHHHHCCCEEEEEEeCCCCcch-hHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGAS--GFIASWLVKLLLQRSYTVKATVRDLNNHNA-EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~--~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di 64 (64)
++++.++|||++ ++||.+++++|++.|++|++.+++.+.... +.++++.....++.++++|+
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 68 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDV 68 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCc
Confidence 457889999986 899999999999999999988876543221 33444433233456777775
No 99
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.26 E-value=6.2e-11 Score=63.86 Aligned_cols=59 Identities=27% Similarity=0.335 Sum_probs=42.3
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++|++|+++++.|++.|++|++++|++.... +....+. ...++.++.+|+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~~~~~-~~~~~~~~~~Dl 61 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSP-NLFELLN-LAKKIEDHFGDI 61 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccch-hHHHHHh-hcCCceEEEccC
Confidence 4578999999999999999999999999999998765432 1111111 123455666664
No 100
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.25 E-value=5.8e-11 Score=60.80 Aligned_cols=61 Identities=20% Similarity=0.195 Sum_probs=43.3
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++|++|++++++|+++|++|++..++..+............+.++.++++|+
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 65 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADV 65 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCc
Confidence 3468999999999999999999999999888777654322112222222345677787775
No 101
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.25 E-value=4.8e-11 Score=61.45 Aligned_cols=59 Identities=24% Similarity=0.174 Sum_probs=42.2
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC-CCcchhHHhhhcCCCCceEEEEccC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL-NNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++|||+++++|..+++.|+++|++|++..++. +... ....++...+.++.++++|+
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl 61 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAE-ETADAVRAAGGRACVVAGDV 61 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHHHHhcCCcEEEEEecc
Confidence 36899999999999999999999999998766433 2221 22233333345678888875
No 102
>PRK09242 tropinone reductase; Provisional
Probab=99.25 E-value=3.6e-11 Score=62.27 Aligned_cols=61 Identities=23% Similarity=0.194 Sum_probs=45.8
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcC--CCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDG--AEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di 64 (64)
+++++++|+|+++++|.++++.|+++|++|++++|+++... +...++.. ++.++.++++|+
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dl 69 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALA-QARDELAEEFPEREVHGLAADV 69 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhhCCCCeEEEEECCC
Confidence 45688999999999999999999999999999999765443 22222221 245677778775
No 103
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.25 E-value=9.6e-11 Score=60.75 Aligned_cols=61 Identities=20% Similarity=0.255 Sum_probs=42.9
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc-ch--hHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH-NA--EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~-~~--~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||+++++|.++++.|++.|++|++++++.... .. +..+++...+.++.++++|+
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~ 70 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADL 70 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCc
Confidence 467899999999999999999999999977776543321 11 22222322245677888875
No 104
>PRK09135 pteridine reductase; Provisional
Probab=99.25 E-value=6.5e-11 Score=60.78 Aligned_cols=62 Identities=16% Similarity=0.176 Sum_probs=43.1
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcC-CCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDG-AEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di 64 (64)
.+.++++|||++|++|++++++|+++|++|++++|+..+........+.. ....+.++.+|+
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 66 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADL 66 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCC
Confidence 35578999999999999999999999999999998643211111112211 123567777775
No 105
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.25 E-value=3.5e-11 Score=62.21 Aligned_cols=58 Identities=21% Similarity=0.204 Sum_probs=44.1
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++|||+++++|.++++.|+++|++|++++|++...+ +...++...+.++.++++|+
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~ 59 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLE-EAKLEIEQFPGQVLTVQMDV 59 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEecC
Confidence 67999999999999999999999999999999865443 22222322235677888875
No 106
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.25 E-value=3.8e-11 Score=62.29 Aligned_cols=56 Identities=18% Similarity=0.060 Sum_probs=42.9
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++|||++|++|++++++|+++|++|++++|++++.+. ....+. +.++.++++|+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~--~~~~~~~~~D~ 57 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAA-LAAELG--AGNAWTGALDV 57 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHhc--CCceEEEEecC
Confidence 579999999999999999999999999999987654321 112221 35677888875
No 107
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.25 E-value=4.9e-11 Score=62.14 Aligned_cols=38 Identities=34% Similarity=0.315 Sum_probs=34.3
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
+.++++|||++|++|++++++|+++|++|++.+|++.+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~ 40 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPAR 40 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 45689999999999999999999999999999997644
No 108
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.25 E-value=6.1e-11 Score=61.12 Aligned_cols=61 Identities=18% Similarity=0.156 Sum_probs=42.8
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|+.++++++|||+++++|+++++.|+++|++|++.+++..... +.+.... ..++.++++|+
T Consensus 1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~-~~~~~~~--~~~~~~~~~D~ 61 (253)
T PRK08642 1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAA-EALADEL--GDRAIALQADV 61 (253)
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHH-HHHHHHh--CCceEEEEcCC
Confidence 6667789999999999999999999999999988765332211 1221111 24566777774
No 109
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.25 E-value=3.8e-11 Score=62.67 Aligned_cols=58 Identities=14% Similarity=0.090 Sum_probs=44.4
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++|||++|++|++++++|+++|++|++.+|+..+.+ ....++...+.++.++++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~ 58 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGE-ETLKLLREAGGDGFYQRCDV 58 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCceEEEEccC
Confidence 36899999999999999999999999999998765443 23333333355677788875
No 110
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.25 E-value=3.2e-11 Score=62.34 Aligned_cols=59 Identities=19% Similarity=0.063 Sum_probs=42.3
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++|||++|++|++++++|++.|++|++.+|++.+... ........+.++.++++|+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~ 60 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTA-LRAEAARRGLALRVEKLDL 60 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcceEEEeeC
Confidence 3679999999999999999999999999999987644321 1111122234566777764
No 111
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.24 E-value=7.2e-11 Score=61.32 Aligned_cols=62 Identities=18% Similarity=0.118 Sum_probs=44.9
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||+++++|.+++++|+++|+.|++..|+..+.......++...+.++.++.+|+
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl 66 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDV 66 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecC
Confidence 45689999999999999999999999999998888543321122233333345677777775
No 112
>PRK09186 flagellin modification protein A; Provisional
Probab=99.24 E-value=7.3e-11 Score=60.97 Aligned_cols=61 Identities=36% Similarity=0.403 Sum_probs=44.6
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcC--CCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDG--AEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di 64 (64)
+++++++|||+++++|.++++.|+++|++|++++|+++... +...++.. ....+.++++|+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dl 64 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALN-ELLESLGKEFKSKKLSLVELDI 64 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHH-HHHHHHHhhcCCCceeEEEecC
Confidence 35688999999999999999999999999999998765543 22222211 123456667775
No 113
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.24 E-value=5.6e-11 Score=61.68 Aligned_cols=60 Identities=17% Similarity=0.073 Sum_probs=44.7
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||+++++|++++++|+++|++|++++|+.... ....++...+.++.++++|+
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dl 63 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIE--KLADELCGRGHRCTAVVADV 63 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHH--HHHHHHHHhCCceEEEECCC
Confidence 3468899999999999999999999999999999875321 22223322245677788875
No 114
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.24 E-value=7.7e-11 Score=63.24 Aligned_cols=61 Identities=28% Similarity=0.437 Sum_probs=43.8
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhc----CCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLD----GAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~Di 64 (64)
++++++|||++|++|++++++|+++|++|++++|++.......+..+. ..+.++.++++|+
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 69 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDL 69 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecC
Confidence 567899999999999999999999999999999876432111122211 1134577888775
No 115
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.24 E-value=3.7e-11 Score=61.94 Aligned_cols=58 Identities=17% Similarity=0.035 Sum_probs=43.5
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++|||++|++|++++++|+++|++|++++|++...+ .....+...+.++.++++|+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~ 59 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAE-AAAKVATDAGGSVIYLVADV 59 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCceEEEECCC
Confidence 57999999999999999999999999999999765432 12222222245677777775
No 116
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.24 E-value=8.9e-11 Score=60.85 Aligned_cols=59 Identities=17% Similarity=0.109 Sum_probs=43.1
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++.++|||++++||.+++++|++.|++|++.+++... +..+++...+.++..+++|+
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~---~~~~~~~~~~~~~~~~~~Dl 66 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPT---ETIEQVTALGRRFLSLTADL 66 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchH---HHHHHHHhcCCeEEEEECCC
Confidence 456889999999999999999999999999988765432 22222222244567777775
No 117
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.23 E-value=6.3e-11 Score=61.43 Aligned_cols=58 Identities=22% Similarity=0.164 Sum_probs=43.7
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++.++|||+++|||.++++.|+++|++|++..|+.+.++. ...++.. .++..+..||
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~-la~~~~~--~~~~~~~~DV 62 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEA-LADEIGA--GAALALALDV 62 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHH-HHHhhcc--CceEEEeecc
Confidence 45789999999999999999999999999999998876642 2222321 3455555554
No 118
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.23 E-value=1e-10 Score=60.32 Aligned_cols=56 Identities=20% Similarity=0.216 Sum_probs=41.7
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++|||++|++|++++++|+++|++|++++|++.+.. ..+.+ ..+.+++++++|+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~-~~~~~--~~~~~~~~~~~D~ 57 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKEL-TKLAE--QYNSNLTFHSLDL 57 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHH-HHHHh--ccCCceEEEEecC
Confidence 57999999999999999999999999999998763211 11111 1235677888875
No 119
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.23 E-value=6.2e-11 Score=60.51 Aligned_cols=40 Identities=28% Similarity=0.222 Sum_probs=35.8
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
+++++++|+|++|++|.+++++|+++|++|++++|++.+.
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~ 44 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPL 44 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhH
Confidence 4568999999999999999999999999999999987553
No 120
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.23 E-value=8e-11 Score=62.14 Aligned_cols=61 Identities=18% Similarity=0.060 Sum_probs=45.1
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC---------CCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL---------NNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||++++||.+++++|++.|++|++.+++. +... +...++...+.++..+.+|+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~Dv 73 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQ-AVVDEIVAAGGEAVANGDDI 73 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHH-HHHHHHHhcCCceEEEeCCC
Confidence 3568899999999999999999999999999988764 2111 23333433355677777775
No 121
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.23 E-value=5.7e-11 Score=61.66 Aligned_cols=61 Identities=18% Similarity=0.137 Sum_probs=45.4
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcC-CCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDG-AEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Di 64 (64)
+++++++|+|+++++|.++++.|+++|++|++++|++++.+ +...++.. .+.++.++++|+
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~D~ 66 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALE-ALAADLRAAHGVDVAVHALDL 66 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHhhcCCceEEEEecC
Confidence 45689999999999999999999999999999999765443 22222221 134567777775
No 122
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.23 E-value=9.4e-11 Score=62.20 Aligned_cols=59 Identities=10% Similarity=0.159 Sum_probs=47.7
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
.+..++|||+++|+|+.++.+|++.|.+++++|.+..... +..++....+ +++.+.+|+
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~-etv~~~~~~g-~~~~y~cdi 95 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNE-ETVKEIRKIG-EAKAYTCDI 95 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchH-HHHHHHHhcC-ceeEEEecC
Confidence 4678999999999999999999999999999999887654 3334443333 788888886
No 123
>PRK08264 short chain dehydrogenase; Validated
Probab=99.23 E-value=9e-11 Score=60.15 Aligned_cols=55 Identities=35% Similarity=0.340 Sum_probs=42.4
Q ss_pred CCCCeEEEEecCcchHHHHHHHHHHHCCC-EEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 2 SGKGKVVCVTGASGFIASWLVKLLLQRSY-TVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 2 ~~~~~~~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
.+..++++|||++|++|++++++|+++|+ +|++++|++.+.. . .+.++.++.+|+
T Consensus 3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~--~------~~~~~~~~~~D~ 58 (238)
T PRK08264 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVT--D------LGPRVVPLQLDV 58 (238)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhh--h------cCCceEEEEecC
Confidence 34568899999999999999999999998 9999998765432 1 134566666664
No 124
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.22 E-value=6.6e-11 Score=61.99 Aligned_cols=59 Identities=17% Similarity=0.137 Sum_probs=43.9
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
.+.++|||++|++|++++++|+++|++|++.+|+..... +...++...+.++.++.+|+
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl 68 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCE-ELVDKIRADGGEAVAFPLDV 68 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEECCC
Confidence 468999999999999999999999999999998764432 22222322345677777775
No 125
>PRK06196 oxidoreductase; Provisional
Probab=99.22 E-value=4.4e-11 Score=63.76 Aligned_cols=56 Identities=20% Similarity=0.174 Sum_probs=42.0
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++|++|.+++++|+++|++|++.+|++++.. +...++ .++.++++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~-~~~~~l----~~v~~~~~Dl 80 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAR-EALAGI----DGVEVVMLDL 80 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh----hhCeEEEccC
Confidence 4578999999999999999999999999999999765432 222222 1255666664
No 126
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.22 E-value=7.6e-11 Score=61.36 Aligned_cols=61 Identities=13% Similarity=-0.012 Sum_probs=42.4
Q ss_pred CCCCeEEEEecCc--chHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 2 SGKGKVVCVTGAS--GFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 2 ~~~~~~~~i~g~~--~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++.++|||++ ++||.+++++|+++|++|++.+|+.+.. +.++++.........+++|+
T Consensus 7 ~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~--~~~~~~~~~~~~~~~~~~D~ 69 (258)
T PRK07533 7 PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR--PYVEPLAEELDAPIFLPLDV 69 (258)
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH--HHHHHHHHhhccceEEecCc
Confidence 3457889999998 5999999999999999999999875432 22222221112234667774
No 127
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.22 E-value=1.6e-10 Score=59.33 Aligned_cols=61 Identities=15% Similarity=0.047 Sum_probs=43.8
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcch---hHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNA---EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++|++|++++++|+++|++|+++++....... +...++...+.++.++.+|+
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 68 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDV 68 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccC
Confidence 46789999999999999999999999999998764332221 11222333345677888774
No 128
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.22 E-value=1.4e-10 Score=60.30 Aligned_cols=40 Identities=30% Similarity=0.258 Sum_probs=35.6
Q ss_pred CCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 2 SGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 2 ~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
.+++++++|||+++++|.+++++|+++|++|++.++++..
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~ 45 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGD 45 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 3456889999999999999999999999999999987654
No 129
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.21 E-value=1.9e-10 Score=62.08 Aligned_cols=60 Identities=23% Similarity=0.182 Sum_probs=42.7
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhc-----CCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLD-----GAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~Di 64 (64)
.+++++||||+|++|++++++|++.|++|++++|...... ....... ....++.++.+|+
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Di 78 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQ-HNLDDVRTSVSEEQWSRFIFIQGDI 78 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcch-hhhhhhhhccccccCCceEEEEccC
Confidence 3578999999999999999999999999999998654321 1111111 1123577788875
No 130
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.21 E-value=9.7e-11 Score=60.91 Aligned_cols=62 Identities=16% Similarity=0.125 Sum_probs=43.5
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhc-CCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLD-GAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Di 64 (64)
+++++++|||++++||++++++|++.|++|++.+++..+.......++. ..+.++.++++|+
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 68 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNI 68 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCC
Confidence 3568999999999999999999999999998887643221112222222 1245677888875
No 131
>PLN02427 UDP-apiose/xylose synthase
Probab=99.21 E-value=1.5e-10 Score=63.10 Aligned_cols=59 Identities=31% Similarity=0.404 Sum_probs=42.1
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHC-CCEEEEEEeCCCCcchhHHhhhc--CCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQR-SYTVKATVRDLNNHNAEHLLTLD--GAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~-~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Di 64 (64)
+.|+++||||+|++|++++++|+++ +++|++++|+..+. ..+.... ....+++++.+|+
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~--~~l~~~~~~~~~~~~~~~~~Dl 74 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKI--KHLLEPDTVPWSGRIQFHRINI 74 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhh--hhhhccccccCCCCeEEEEcCC
Confidence 4578999999999999999999998 59999998865432 1221111 1123577887775
No 132
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.20 E-value=1.2e-10 Score=61.12 Aligned_cols=57 Identities=21% Similarity=0.112 Sum_probs=42.4
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++|++|++++++|+++|++|++++|++++. +.+... .+.++..+++|+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~--~~l~~~--~~~~~~~~~~D~ 59 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAAR--ADFEAL--HPDRALARLLDV 59 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHH--HHHHhh--cCCCeeEEEccC
Confidence 457899999999999999999999999999999976543 122211 123566666664
No 133
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.20 E-value=8.7e-11 Score=60.98 Aligned_cols=58 Identities=21% Similarity=0.129 Sum_probs=43.7
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++|||++|++|.++++.|++.|++|++++|++.+.+ +....+...+.++.++.+|+
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl 59 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLA-SLAQELADHGGEALVVPTDV 59 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEccC
Confidence 57999999999999999999999999999998765432 22233333345677777774
No 134
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.20 E-value=7.7e-11 Score=60.71 Aligned_cols=60 Identities=25% Similarity=0.289 Sum_probs=42.9
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEE-EeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKAT-VRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
.+++++|||++|++|++++++|+++|++|++. .|+..+.+ +..+++...+.++.++.+|+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~ 63 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAE-ETAEEIEALGRKALAVKANV 63 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHHhcCCeEEEEEcCC
Confidence 45789999999999999999999999998764 55543322 22233333345677888875
No 135
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.20 E-value=2.2e-10 Score=59.67 Aligned_cols=60 Identities=17% Similarity=0.104 Sum_probs=43.4
Q ss_pred CCCeEEEEecCc--chHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcC--CCCceEEEEccC
Q 036468 3 GKGKVVCVTGAS--GFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDG--AEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~--~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di 64 (64)
++++.++|||++ ++||.+++++|+++|++|++.+|+.... +.++++.. .+.++.++++|+
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dv 68 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLE--KEVRELADTLEGQESLLLPCDV 68 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccch--HHHHHHHHHcCCCceEEEecCC
Confidence 356889999997 8999999999999999999988754322 22222211 135677888885
No 136
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.20 E-value=1.6e-10 Score=63.44 Aligned_cols=61 Identities=23% Similarity=0.332 Sum_probs=43.3
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcch-hHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNA-EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++|++|++++++|+++|++|++++|++.+... ....+......+++++++|+
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 120 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDV 120 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeC
Confidence 45789999999999999999999999999999998754321 01111111123567777774
No 137
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.20 E-value=1.3e-10 Score=62.43 Aligned_cols=60 Identities=23% Similarity=0.247 Sum_probs=47.8
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhc--CCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLD--GAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Di 64 (64)
.++.++|||+++|||.++++.|+.+|.+|++.+|+..... +..+++. ....++.++++|+
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~-~~~~~i~~~~~~~~i~~~~lDL 95 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGE-EAKEQIQKGKANQKIRVIQLDL 95 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHH-HHHHHHHhcCCCCceEEEECCC
Confidence 4678999999999999999999999999999999985554 3334443 2345677888886
No 138
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.20 E-value=7.6e-11 Score=67.54 Aligned_cols=60 Identities=23% Similarity=0.212 Sum_probs=46.3
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||+++++|.+++++|+++|++|++++|+++... +...++...+.++.++++|+
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv 429 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALD-ELVAEIRAKGGTAHAYTCDL 429 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEEecC
Confidence 4678999999999999999999999999999999765443 22233333345678888875
No 139
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.19 E-value=1e-10 Score=57.20 Aligned_cols=59 Identities=27% Similarity=0.332 Sum_probs=43.4
Q ss_pred eEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeCCCCcch-hHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRS-YTVKATVRDLNNHNA-EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di 64 (64)
+.++|||+++++|.+++++|+++| +.|++.+|+++.... +...++...+.++.++++|+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~ 61 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDL 61 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESET
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccc
Confidence 578999999999999999999995 577888887211111 33344444567889999885
No 140
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.19 E-value=1.4e-10 Score=61.42 Aligned_cols=59 Identities=27% Similarity=0.268 Sum_probs=43.3
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||+++++|.++++.|++.|++|++++|++++.. +...++.. ..++..+.+|+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~-~~~~~l~~-~~~~~~~~~Dv 66 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELA-ALAAELGG-DDRVLTVVADV 66 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhcC-CCcEEEEEecC
Confidence 4688999999999999999999999999999999765432 22222322 33455555664
No 141
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.19 E-value=1.2e-10 Score=59.92 Aligned_cols=57 Identities=23% Similarity=0.236 Sum_probs=42.0
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++|++|++++++|+++|++|++++|+.+... +...++ +.++.++++|+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~ 61 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLE-AARAEL---GESALVIRADA 61 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHH-HHHHHh---CCceEEEEecC
Confidence 4578999999999999999999999999999988754322 122222 34566666664
No 142
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.19 E-value=7.6e-11 Score=63.23 Aligned_cols=59 Identities=12% Similarity=0.138 Sum_probs=43.8
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcC--CCCceEEEEccC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDG--AEERLHLFKANS 64 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di 64 (64)
++.++||||+++||++++++|+++|++|++++|++++.+. ..+++.. .+.++..+.+|+
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~-~~~~l~~~~~~~~~~~~~~Dl 113 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKD-VSDSIQSKYSKTQIKTVVVDF 113 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHH-HHHHHHHHCCCcEEEEEEEEC
Confidence 5789999999999999999999999999999998765532 2222221 123566666664
No 143
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.19 E-value=1.8e-10 Score=59.75 Aligned_cols=64 Identities=16% Similarity=0.078 Sum_probs=45.8
Q ss_pred CCCCCeEEEEecCcc--hHHHHHHHHHHHCCCEEEEEEeCCCCc---------ch-hHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASG--FIASWLVKLLLQRSYTVKATVRDLNNH---------NA-EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~--~ig~~~~~~l~~~~~~v~~~~r~~~~~---------~~-~~~~~~~~~~~~~~~~~~Di 64 (64)
|.+++++++|||+++ ++|.+++++|+++|++|++.+|++.+. .. .....+...+.++.++.+|+
T Consensus 1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 76 (256)
T PRK12748 1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDL 76 (256)
T ss_pred CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCC
Confidence 566778899999995 899999999999999999999873211 00 11122223345678888885
No 144
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.18 E-value=1.6e-10 Score=59.70 Aligned_cols=60 Identities=27% Similarity=0.210 Sum_probs=40.6
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEe-CCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVR-DLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||+++++|.+++++|++.|++|++.++ +.+... +...++...+.++..+++|+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~ 63 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAE-ETVYEIQSNGGSAFSIGANL 63 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHH-HHHHHHHhcCCceEEEeccc
Confidence 5688999999999999999999999999988754 322221 22223322234455555553
No 145
>PRK06398 aldose dehydrogenase; Validated
Probab=99.18 E-value=2.8e-10 Score=59.21 Aligned_cols=38 Identities=29% Similarity=0.104 Sum_probs=34.5
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
+++++++|||+++++|++++++|+++|++|++.+|+..
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~ 41 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP 41 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcc
Confidence 45689999999999999999999999999999998754
No 146
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.18 E-value=2.1e-10 Score=59.43 Aligned_cols=59 Identities=17% Similarity=0.219 Sum_probs=43.6
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcC--CCCceEEEEccC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDG--AEERLHLFKANS 64 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di 64 (64)
+++++|||+++++|.+++++|+++|++|++++|+...... ...++.. ...++.++.+|+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~ 62 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAAN-VAQEINAEYGEGMAYGFGADA 62 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHHhcCCceeEEEEccC
Confidence 4689999999999999999999999999999987654432 2222221 124577888775
No 147
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.18 E-value=2.3e-10 Score=58.92 Aligned_cols=60 Identities=20% Similarity=0.164 Sum_probs=42.8
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC-CCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL-NNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||+++++|.+++++|+++|++|++..+.. +..+ +....+...+.++.++.+|+
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~D~ 65 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAE-NLVNELGKEGHDVYAVQADV 65 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHH-HHHHHHHhcCCeEEEEECCC
Confidence 468899999999999999999999999998765432 2221 22233333345677888875
No 148
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.18 E-value=2e-10 Score=59.32 Aligned_cols=60 Identities=25% Similarity=0.259 Sum_probs=42.4
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEE-EeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKAT-VRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++|++|++++++|+++|+.|.+. .|+.++.. +....+...+.++.++++|+
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~ 65 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAAD-ETIREIESNGGKAFLIEADL 65 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHHhcCCcEEEEEcCc
Confidence 45789999999999999999999999998775 45443322 22233332244677777775
No 149
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.18 E-value=1.4e-10 Score=60.12 Aligned_cols=60 Identities=17% Similarity=0.245 Sum_probs=45.0
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCE-EEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYT-VKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|+|+++++|..++++|++.|++ |++++|++.+.. ....++...+.++.++.+|+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~ 65 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGE-AQAAELEALGAKAVFVQADL 65 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHH-HHHHHHHhcCCeEEEEEccC
Confidence 5678999999999999999999999998 999998765443 22223333345677777774
No 150
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.17 E-value=2.6e-10 Score=58.69 Aligned_cols=61 Identities=16% Similarity=0.142 Sum_probs=41.9
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++.++|||+++++|++++++|+++|++|++..+.......+.+.++...+.++..+.+|+
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 62 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNV 62 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCC
Confidence 4578999999999999999999999999888654222211123333333345566667764
No 151
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.17 E-value=1.8e-10 Score=59.27 Aligned_cols=60 Identities=20% Similarity=0.140 Sum_probs=41.3
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++.++|||+++++|++++++|+++|+.|++.+++...........+...+.++.++++|+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl 61 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADV 61 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEecc
Confidence 367999999999999999999999999887764432211122222332344567777775
No 152
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.17 E-value=2.9e-10 Score=58.33 Aligned_cols=59 Identities=27% Similarity=0.265 Sum_probs=43.0
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++|||+++++|.+++++|++.|++|++.+|++.+...+........+.++.++.+|+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~ 61 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDV 61 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCC
Confidence 57999999999999999999999999999998854211122222222345677888775
No 153
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.17 E-value=1.5e-10 Score=59.75 Aligned_cols=58 Identities=19% Similarity=0.211 Sum_probs=44.0
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++|||++|++|.+++++|++.|++|++++|+..... +...++...+.++.++.+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl 58 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAK-ETAKEINQAGGKAVAYKLDV 58 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEEcCC
Confidence 46899999999999999999999999999998754332 23333333355677888875
No 154
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.17 E-value=2e-10 Score=59.49 Aligned_cols=57 Identities=23% Similarity=0.169 Sum_probs=42.7
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++|||++|++|.+++++|+++|++|++++|++.+.. ....++. +.++.++.+|+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~-~~~~~~~--~~~~~~~~~D~ 58 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALA-AFADALG--DARFVPVACDL 58 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhc--CCceEEEEecC
Confidence 367999999999999999999999999999998765432 1222221 24567777774
No 155
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.17 E-value=2.1e-10 Score=59.53 Aligned_cols=58 Identities=22% Similarity=0.147 Sum_probs=43.4
Q ss_pred CCCeEEEEecCc--chHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGAS--GFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~--~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||++ ++||.+++++|+++|++|++.+|+. +.. +.++++.. .++.++++|+
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~-~~~~~~~~--~~~~~~~~Dl 64 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMK-KSLQKLVD--EEDLLVECDV 64 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHH-HHHHhhcc--CceeEEeCCC
Confidence 356889999999 7999999999999999999998863 221 33333322 3567788885
No 156
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.17 E-value=1.7e-10 Score=61.62 Aligned_cols=36 Identities=31% Similarity=0.522 Sum_probs=32.8
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
|+++||||+|++|++++++|+++|++|++++|++.+
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~ 36 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRK 36 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHH
Confidence 379999999999999999999999999999997643
No 157
>PRK05855 short chain dehydrogenase; Validated
Probab=99.17 E-value=1.6e-10 Score=65.05 Aligned_cols=60 Identities=22% Similarity=0.189 Sum_probs=45.9
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
..++++|+|++|+||++++++|+++|++|++++|+.++.. +....+...+.++.++.+|+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv 373 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAE-RTAELIRAAGAVAHAYRVDV 373 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEEcCC
Confidence 3578999999999999999999999999999999765443 22233333345678888885
No 158
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.16 E-value=3e-10 Score=58.73 Aligned_cols=58 Identities=21% Similarity=0.131 Sum_probs=42.4
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+.+++++|||+++++|.+++++|+++|++|++++|++... +...+.. ..++..+.+|+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~--~~~~~~~--~~~~~~~~~Dl 70 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA--EVAAQLL--GGNAKGLVCDV 70 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHhh--CCceEEEEecC
Confidence 4568899999999999999999999999999999976432 1222221 23455666664
No 159
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.16 E-value=1.6e-10 Score=59.71 Aligned_cols=55 Identities=22% Similarity=0.207 Sum_probs=41.1
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|+++|||++|++|.++++.|+++|++|++++|++++.. .+.... +.++.++.+|+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~--~~~~~~--~~~~~~~~~Dl 55 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQ--ELKDEL--GDNLYIAQLDV 55 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHH--HHHHHh--ccceEEEEecC
Confidence 46899999999999999999999999999999765432 221111 23566777764
No 160
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.16 E-value=1.8e-10 Score=60.61 Aligned_cols=39 Identities=23% Similarity=0.151 Sum_probs=35.3
Q ss_pred CCCCCeEEEEecCc--chHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 1 MSGKGKVVCVTGAS--GFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 1 ~~~~~~~~~i~g~~--~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
|.+.++.++|||++ ++||+++++.|+++|++|++.+|+.
T Consensus 1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~ 41 (274)
T PRK08415 1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNE 41 (274)
T ss_pred CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCH
Confidence 56678899999997 7999999999999999999999874
No 161
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.16 E-value=3.9e-10 Score=57.73 Aligned_cols=40 Identities=20% Similarity=0.095 Sum_probs=36.0
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
|.+++++++|||+++++|.+++++|+++|++|++.+|++.
T Consensus 1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~ 40 (235)
T PRK06550 1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK 40 (235)
T ss_pred CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5567789999999999999999999999999999998754
No 162
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.16 E-value=2.1e-10 Score=58.92 Aligned_cols=39 Identities=26% Similarity=0.196 Sum_probs=35.4
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
++++++|||++|++|.+++++|+++|++|++++|++++.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~ 43 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKL 43 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHH
Confidence 457899999999999999999999999999999987654
No 163
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.16 E-value=2.8e-10 Score=61.08 Aligned_cols=60 Identities=30% Similarity=0.398 Sum_probs=47.6
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC-cch-hHHhhhcCCCCceEEEEccC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN-HNA-EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~-~~~-~~~~~~~~~~~~~~~~~~Di 64 (64)
.++|++||+.|+||++.+.+|++.|+.|+++|.-.+. ... +.++++...+.++.++++|+
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl 63 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDL 63 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEecc
Confidence 4689999999999999999999999999999853322 212 55666655568899999986
No 164
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.15 E-value=2.4e-10 Score=59.97 Aligned_cols=38 Identities=24% Similarity=0.333 Sum_probs=34.3
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
++++++|||++|++|.+++++|++.|++|++.+|+++.
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~ 40 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEED 40 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 45689999999999999999999999999999997654
No 165
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.15 E-value=3.1e-10 Score=58.43 Aligned_cols=53 Identities=26% Similarity=0.192 Sum_probs=40.5
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++|||++|++|.+++++|+++|++|++++|+..+. . . ...+.++.++++|+
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~---~-~--~~~~~~~~~~~~D~ 54 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS---L-A--AAAGERLAEVELDL 54 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh---h-h--hccCCeEEEEEecc
Confidence 4799999999999999999999999999999876431 1 1 11234567777774
No 166
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.15 E-value=4.9e-10 Score=58.15 Aligned_cols=56 Identities=32% Similarity=0.479 Sum_probs=41.5
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
.+++++|+|++|++|+.++++|++.|++|+++.|+++... . ......+++++++|+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~---~~~~~~~~~~~~~Dl 71 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAK--T---SLPQDPSLQIVRADV 71 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHH--H---hcccCCceEEEEeeC
Confidence 3578999999999999999999999999999998765321 1 111123566777664
No 167
>PLN02686 cinnamoyl-CoA reductase
Probab=99.15 E-value=2.9e-10 Score=61.91 Aligned_cols=37 Identities=32% Similarity=0.637 Sum_probs=33.5
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
++++++|||++|++|++++++|+++|++|+++.|+..
T Consensus 52 ~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~ 88 (367)
T PLN02686 52 EARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQE 88 (367)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5688999999999999999999999999998887654
No 168
>PRK05599 hypothetical protein; Provisional
Probab=99.15 E-value=1.8e-10 Score=59.60 Aligned_cols=57 Identities=16% Similarity=0.162 Sum_probs=42.1
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCC-CceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAE-ERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Di 64 (64)
|.++|||+++++|.+++++|+ +|++|++.+|++++.+ +..+++...+ ..+.++++|+
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dv 58 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQ-GLASDLRQRGATSVHVLSFDA 58 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHH-HHHHHHHhccCCceEEEEccc
Confidence 468999999999999999998 5999999999876543 2223333222 2467888885
No 169
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.14 E-value=2.1e-10 Score=60.23 Aligned_cols=37 Identities=22% Similarity=0.128 Sum_probs=33.4
Q ss_pred CCCeEEEEecCcc--hHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 3 GKGKVVCVTGASG--FIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 3 ~~~~~~~i~g~~~--~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
++++.++|||+++ +||++++++|+++|++|++.+|+.
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~ 43 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGE 43 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCch
Confidence 4568899999996 999999999999999999998864
No 170
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.14 E-value=5.5e-10 Score=62.22 Aligned_cols=36 Identities=39% Similarity=0.503 Sum_probs=32.8
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+.++++|||++|++|++++++|+++|++|+++++..
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~ 153 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFF 153 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCC
Confidence 458899999999999999999999999999988754
No 171
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.14 E-value=3.6e-10 Score=58.00 Aligned_cols=58 Identities=29% Similarity=0.310 Sum_probs=41.9
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||++|++|++++++|+++|+.|++.++++++.. ...... +.++.++.+|+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~-~~~~~~---~~~~~~~~~D~ 61 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLE-ALAAEL---GERVKIFPANL 61 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHh---CCceEEEEccC
Confidence 45689999999999999999999999999988877654432 111111 23566666664
No 172
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.14 E-value=2.8e-10 Score=60.69 Aligned_cols=53 Identities=30% Similarity=0.409 Sum_probs=39.1
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++|||++|+||++++.+|++.|++|+++|.--.... +.+.... .+++++|+
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~-~~v~~~~-----~~f~~gDi 53 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHK-IALLKLQ-----FKFYEGDL 53 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCH-HHhhhcc-----CceEEecc
Confidence 47999999999999999999999999999986443322 2333211 45666664
No 173
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.14 E-value=3.7e-10 Score=58.56 Aligned_cols=37 Identities=32% Similarity=0.270 Sum_probs=33.9
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
++++++|||+++++|++++++|+++|++|++++|++.
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~ 44 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRP 44 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChh
Confidence 4688999999999999999999999999999998754
No 174
>PRK06182 short chain dehydrogenase; Validated
Probab=99.14 E-value=4e-10 Score=58.94 Aligned_cols=38 Identities=34% Similarity=0.393 Sum_probs=34.2
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
++++++|||++|++|++++++|++.|++|++++|++++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~ 39 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDK 39 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 35789999999999999999999999999999987643
No 175
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.13 E-value=3.2e-10 Score=64.71 Aligned_cols=39 Identities=31% Similarity=0.453 Sum_probs=35.4
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
+++.++|+||+|++|++++++|++.|++|++++|+.++.
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl 117 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRA 117 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 467899999999999999999999999999999987654
No 176
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.13 E-value=5.4e-10 Score=57.31 Aligned_cols=37 Identities=24% Similarity=0.151 Sum_probs=33.8
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
.++++|||+++++|.+++++|+++|++|++.+|++.+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 38 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP 38 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh
Confidence 4689999999999999999999999999999997654
No 177
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.13 E-value=4.3e-10 Score=58.87 Aligned_cols=59 Identities=14% Similarity=0.120 Sum_probs=42.4
Q ss_pred CCeEEEEecCcc--hHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASG--FIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~--~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++.++|||+++ +||+++++.|+++|++|++.+|+. ... +.++++.........+.+|+
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~-~~~~~~~~~~~~~~~~~~Dl 65 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLK-GRVEEFAAQLGSDIVLPCDV 65 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHH-HHHHHHHhccCCceEeecCC
Confidence 467899999985 999999999999999999988863 221 23333332223456677775
No 178
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.13 E-value=2.7e-10 Score=58.45 Aligned_cols=57 Identities=16% Similarity=0.158 Sum_probs=41.6
Q ss_pred EEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 8 VCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 8 ~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++|||+++++|.+++++|+++|++|++.++...+.......++...+.++.++++|+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl 57 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDV 57 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccC
Confidence 589999999999999999999999998887543221122333333345788888885
No 179
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.13 E-value=2.4e-10 Score=58.92 Aligned_cols=39 Identities=23% Similarity=0.132 Sum_probs=35.2
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
++++++|||++|++|.+++++|++.|++|++++|++.+.
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~ 49 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKL 49 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHH
Confidence 468899999999999999999999999999999987543
No 180
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.13 E-value=5.8e-10 Score=57.81 Aligned_cols=37 Identities=24% Similarity=0.253 Sum_probs=32.9
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+++++++|||+++++|.+++++|++.|++|++.+++.
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~ 41 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA 41 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4568999999999999999999999999998877654
No 181
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.13 E-value=2.8e-10 Score=59.77 Aligned_cols=57 Identities=21% Similarity=0.106 Sum_probs=42.0
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++.++|||+ ++||++++++|. +|++|++++|++++.+ +..+++...+.++.++++|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dv 58 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLE-AAAKTLREAGFDVSTQEVDV 58 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEEeec
Confidence 467899998 699999999996 7999999999765433 23333333345677888885
No 182
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.13 E-value=2.7e-10 Score=59.06 Aligned_cols=38 Identities=24% Similarity=0.185 Sum_probs=34.5
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
++++++|||++|++|.+++++|+++|++|++++|+..+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~ 43 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEA 43 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 46889999999999999999999999999999987654
No 183
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.12 E-value=4.7e-10 Score=58.68 Aligned_cols=55 Identities=29% Similarity=0.308 Sum_probs=41.2
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++|||++|++|++++++|++.|++|++.+|++... ..+... ...++.++++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~--~~~~~~--~~~~~~~~~~D~ 57 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDAL--DDLKAR--YGDRLWVLQLDV 57 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHh--ccCceEEEEccC
Confidence 6799999999999999999999999999999875432 122111 123567777775
No 184
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.12 E-value=4.1e-10 Score=58.37 Aligned_cols=38 Identities=18% Similarity=0.121 Sum_probs=34.5
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
++++++|||++|++|++++++|+++|++|++++|++..
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~ 47 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAA 47 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 46889999999999999999999999999999997643
No 185
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.12 E-value=6.9e-10 Score=57.25 Aligned_cols=37 Identities=24% Similarity=0.160 Sum_probs=33.7
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
++.++++|||+++++|++++++|+++|++|++.+|++
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch
Confidence 3457899999999999999999999999999999865
No 186
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.12 E-value=3.9e-10 Score=59.04 Aligned_cols=38 Identities=34% Similarity=0.267 Sum_probs=34.0
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
+++.++|||++|++|++++++|+++|++|++.+|++..
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~ 39 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTAT 39 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 34689999999999999999999999999999987654
No 187
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=99.11 E-value=3.4e-10 Score=58.48 Aligned_cols=63 Identities=25% Similarity=0.264 Sum_probs=50.2
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcch-hHHhhhcCCCCceEEEEccC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNA-EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di 64 (64)
|+.+++.++++|+.|+||.++.++|+..|..+.+++.+.++.+. ..+++.. +..++.|+++|+
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~-p~~~v~F~~~DV 64 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAIN-PSVSVIFIKCDV 64 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccC-CCceEEEEEecc
Confidence 56788999999999999999999999999988888877766543 3333332 356788999986
No 188
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.11 E-value=6.9e-10 Score=59.54 Aligned_cols=58 Identities=17% Similarity=0.189 Sum_probs=42.0
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC--CEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS--YTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++|||++|++|++++++|+++| ++|++.+|+.... ..+..... ..++.++.+|+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~--~~~~~~~~-~~~~~~v~~Dl 62 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQ--WEMQQKFP-APCLRFFIGDV 62 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHH--HHHHHHhC-CCcEEEEEccC
Confidence 56889999999999999999999986 7899888865432 12211111 24677888875
No 189
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.10 E-value=6.3e-10 Score=55.21 Aligned_cols=48 Identities=29% Similarity=0.445 Sum_probs=40.0
Q ss_pred EEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 8 VCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 8 ~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|+|+||+|++|+.++++|++.+++|+++.|++.+.+. ..+++++++|+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---------~~~~~~~~~d~ 48 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---------SPGVEIIQGDL 48 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---------CTTEEEEESCT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---------ccccccceeee
Confidence 6899999999999999999999999999998764321 35677777764
No 190
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.10 E-value=7.2e-10 Score=56.94 Aligned_cols=58 Identities=26% Similarity=0.289 Sum_probs=40.9
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEE-EeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKAT-VRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+.++|||++|++|.+++++|+++|++|++. .|++++.. +...++...+.++.++++|+
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~ 60 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQ-EVVNLITQAGGKAFVLQADI 60 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHH-HHHHHHHhCCCeEEEEEccC
Confidence 479999999999999999999999999875 45443322 22233333345677778775
No 191
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.10 E-value=1.2e-09 Score=60.88 Aligned_cols=36 Identities=33% Similarity=0.403 Sum_probs=32.8
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
..++++|||++|++|++++++|+++|++|++++|..
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~ 154 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFF 154 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 357899999999999999999999999999998754
No 192
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.10 E-value=8.4e-10 Score=56.35 Aligned_cols=37 Identities=35% Similarity=0.422 Sum_probs=34.0
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
++++|||++|++|++++++|++.|++|++++|++.+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~ 38 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQD 38 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcch
Confidence 5799999999999999999999999999999987654
No 193
>PRK06484 short chain dehydrogenase; Validated
Probab=99.09 E-value=7.1e-10 Score=62.28 Aligned_cols=59 Identities=22% Similarity=0.244 Sum_probs=44.5
Q ss_pred CCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 2 SGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 2 ~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
...+++++|||++++||.+++++|+++|++|++++|+.++.. +...++ +.++.++++|+
T Consensus 2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~ 60 (520)
T PRK06484 2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERAR-ERADSL---GPDHHALAMDV 60 (520)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCceeEEEecc
Confidence 346789999999999999999999999999999999765443 222222 34556677764
No 194
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.08 E-value=7.9e-10 Score=56.64 Aligned_cols=59 Identities=17% Similarity=0.222 Sum_probs=40.9
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+.++|||++|++|.+++++|+++|++|++..|...+...+...+....+.++.++.+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~ 59 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDV 59 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecC
Confidence 46899999999999999999999999999888322111122222222244677777774
No 195
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.08 E-value=1.2e-09 Score=60.80 Aligned_cols=34 Identities=29% Similarity=0.308 Sum_probs=31.6
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEe
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVR 37 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r 37 (64)
++++++||||+|+||++++++|+++|++|+++++
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~ 79 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDN 79 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEec
Confidence 4678999999999999999999999999999875
No 196
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.08 E-value=1.3e-09 Score=60.29 Aligned_cols=39 Identities=41% Similarity=0.432 Sum_probs=34.8
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
+++++++|||++|++|++++++|+++|++|++++|++++
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~ 214 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDK 214 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 456889999999999999999999999999999987543
No 197
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.08 E-value=1.1e-09 Score=57.01 Aligned_cols=60 Identities=25% Similarity=0.169 Sum_probs=43.6
Q ss_pred CCeEEEEecCcc-hHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcC--CCCceEEEEccC
Q 036468 4 KGKVVCVTGASG-FIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDG--AEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~-~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di 64 (64)
++++++|||++| ++|.++++.|+++|++|++.+|+.++.. +...++.. ...++.++++|+
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl 78 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLG-ETADELAAELGLGRVEAVVCDV 78 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHHHhcCCceEEEEEccC
Confidence 457899999986 8999999999999999999988765443 22222221 123577888875
No 198
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.08 E-value=7.2e-10 Score=57.86 Aligned_cols=59 Identities=17% Similarity=0.155 Sum_probs=41.5
Q ss_pred CCeEEEEecC--cchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGA--SGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~--~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++.++|||+ +++||++++++|+++|++|++.+|+.... +.++++.........+++|+
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dv 65 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLE--ERVRKMAAELDSELVFRCDV 65 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHH--HHHHHHHhccCCceEEECCC
Confidence 4678999996 67999999999999999999987753211 33333332222345677775
No 199
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.08 E-value=6.7e-10 Score=57.68 Aligned_cols=57 Identities=16% Similarity=0.091 Sum_probs=42.8
Q ss_pred EEEEecCcchHHHHHHHHHHH----CCCEEEEEEeCCCCcchhHHhhhcC--CCCceEEEEccC
Q 036468 7 VVCVTGASGFIASWLVKLLLQ----RSYTVKATVRDLNNHNAEHLLTLDG--AEERLHLFKANS 64 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~----~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di 64 (64)
.++|||++++||.+++++|++ .|++|++.+|+++... +..+++.. .+.++.++.+|+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~-~~~~~l~~~~~~~~v~~~~~Dl 64 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALR-QLKAEIGAERSGLRVVRVSLDL 64 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHH-HHHHHHHhcCCCceEEEEEecc
Confidence 589999999999999999997 7999999999865543 22233322 244677888885
No 200
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.07 E-value=5.3e-10 Score=56.82 Aligned_cols=36 Identities=22% Similarity=0.124 Sum_probs=32.4
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
+++++|||++|++|+++++.|+++ ++|++++|++..
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~ 38 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAER 38 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHH
Confidence 468999999999999999999999 999999997543
No 201
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.06 E-value=8.3e-10 Score=58.02 Aligned_cols=59 Identities=14% Similarity=-0.008 Sum_probs=40.7
Q ss_pred CCeEEEEecCc--chHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGAS--GFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~--~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++.++|||++ ++||.++++.|+++|++|++.+|+.... +.++++.........+++|+
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~--~~~~~l~~~~~~~~~~~~Dl 69 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALK--KRVEPLAAELGAFVAGHCDV 69 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHH--HHHHHHHHhcCCceEEecCC
Confidence 45789999997 8999999999999999999888753211 23333322112345677775
No 202
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.05 E-value=5.4e-10 Score=57.22 Aligned_cols=35 Identities=14% Similarity=0.060 Sum_probs=32.0
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
+++|||+++++|+++++.|+++|++|++.+|+.++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~ 36 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDD 36 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 58999999999999999999999999999987543
No 203
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.05 E-value=1.7e-09 Score=56.37 Aligned_cols=58 Identities=21% Similarity=0.185 Sum_probs=41.5
Q ss_pred CCeEEEEecC--cchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHH-hhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGA--SGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHL-LTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~--~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Di 64 (64)
++++++|||+ +++||.+++++|+++|++|++.+|++.....+.+ .++ ..++.++++|+
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv 66 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDV 66 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCC
Confidence 4678999999 8999999999999999999999886532111122 122 22456777775
No 204
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.04 E-value=1.3e-09 Score=55.70 Aligned_cols=57 Identities=21% Similarity=0.078 Sum_probs=40.7
Q ss_pred EEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 8 VCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 8 ~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++|||++|++|++++++|+++|++|++++|+..+........+...+.++.++.+|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~ 57 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDV 57 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecC
Confidence 479999999999999999999999999988753211122222333345677777775
No 205
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.04 E-value=2.2e-09 Score=57.51 Aligned_cols=34 Identities=35% Similarity=0.270 Sum_probs=30.7
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
|+++|||++|++|++++++|+++|++|+++++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~ 34 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLC 34 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCC
Confidence 4699999999999999999999999999987653
No 206
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.04 E-value=1.2e-09 Score=57.03 Aligned_cols=36 Identities=19% Similarity=0.141 Sum_probs=32.2
Q ss_pred CCeEEEEecCcc--hHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 4 KGKVVCVTGASG--FIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 4 ~~~~~~i~g~~~--~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+++.++|||+++ +||.++++.|+++|++|++.+|+.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~ 44 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE 44 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch
Confidence 467899999997 899999999999999999988763
No 207
>PRK08017 oxidoreductase; Provisional
Probab=99.04 E-value=1.3e-09 Score=56.29 Aligned_cols=37 Identities=32% Similarity=0.290 Sum_probs=33.3
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
++++|||++|++|.++++.|+++|++|++++|++++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~ 39 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDV 39 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHh
Confidence 5799999999999999999999999999999876543
No 208
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.03 E-value=2.5e-09 Score=57.66 Aligned_cols=34 Identities=29% Similarity=0.422 Sum_probs=30.5
Q ss_pred eEEEEecCcchHHHHHHHHHHHC-CCEEEEEEeCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQR-SYTVKATVRDL 39 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~-~~~v~~~~r~~ 39 (64)
|+++|||++|++|++++++|++. +++|++++|+.
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~ 36 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQT 36 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcH
Confidence 47999999999999999999986 69999998754
No 209
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=99.03 E-value=7.5e-10 Score=59.09 Aligned_cols=56 Identities=18% Similarity=0.201 Sum_probs=44.4
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcch--hHHhhhcCCCCceEEEEcc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNA--EHLLTLDGAEERLHLFKAN 63 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D 63 (64)
.-..|||++.+||++.+++|+++|.+|+++.|+.+++.. +++++.. +..++++..|
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~--~vev~~i~~D 107 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKY--KVEVRIIAID 107 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHh--CcEEEEEEEe
Confidence 447899999999999999999999999999999988764 3333322 3566777666
No 210
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.03 E-value=1.6e-09 Score=56.52 Aligned_cols=58 Identities=21% Similarity=0.147 Sum_probs=40.2
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC-CCcchhHHhhhcC-CCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL-NNHNAEHLLTLDG-AEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~-~~~~~~~~~~~~~-~~~~~~~~~~Di 64 (64)
+.++|||++++||++++++|+++|++|++.+++. +..+ ...+++.. .+.++.++.+|+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~Dv 61 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAAS-TLAAELNARRPNSAVTCQADL 61 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHH-HHHHHHHhccCCceEEEEccC
Confidence 4689999999999999999999999999887643 2221 22233321 133455677775
No 211
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.03 E-value=1.9e-09 Score=62.41 Aligned_cols=37 Identities=27% Similarity=0.411 Sum_probs=32.9
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHC-CCEEEEEEeCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQR-SYTVKATVRDLN 40 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~-~~~v~~~~r~~~ 40 (64)
++++++||||+|++|++++++|+++ |++|++++|++.
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~ 351 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSD 351 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCch
Confidence 3578999999999999999999986 799999998664
No 212
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.03 E-value=2e-09 Score=56.36 Aligned_cols=36 Identities=33% Similarity=0.354 Sum_probs=32.8
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
++++|||++|++|.+++++|+++|++|++++|++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~ 37 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAED 37 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 579999999999999999999999999999987643
No 213
>PLN00015 protochlorophyllide reductase
Probab=99.02 E-value=8.1e-10 Score=58.88 Aligned_cols=55 Identities=16% Similarity=0.175 Sum_probs=41.2
Q ss_pred EEecCcchHHHHHHHHHHHCC-CEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 9 CVTGASGFIASWLVKLLLQRS-YTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 9 ~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+|||++++||.+++++|+++| ++|++.+|+.++.. +...++.....++.++++|+
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dl 56 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAE-RAAKSAGMPKDSYTVMHLDL 56 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHH-HHHHHhcCCCCeEEEEEecC
Confidence 589999999999999999999 99999998765432 23333333344677788875
No 214
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.02 E-value=2e-09 Score=55.31 Aligned_cols=38 Identities=39% Similarity=0.331 Sum_probs=34.1
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
++++++|+|++|++|.++++.|+++|++|++++|++.+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~ 45 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAA 45 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 45789999999999999999999999999999987643
No 215
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.01 E-value=1.2e-09 Score=57.18 Aligned_cols=36 Identities=28% Similarity=0.157 Sum_probs=32.4
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
++++|||+++++|.+++++|+++|++|++++|++++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~ 36 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADG 36 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 368999999999999999999999999999987654
No 216
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.01 E-value=5.4e-09 Score=50.96 Aligned_cols=59 Identities=17% Similarity=0.175 Sum_probs=42.3
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCC-EEEEEEeCCCCcch--hHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSY-TVKATVRDLNNHNA--EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Di 64 (64)
++++|+|++|++|.+++++|+++|+ .|++..|++.+... ..+.++...+.++.++.+|+
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 62 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDV 62 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCC
Confidence 3689999999999999999999986 68888887654432 11233433455677777774
No 217
>PRK06484 short chain dehydrogenase; Validated
Probab=99.00 E-value=1.9e-09 Score=60.58 Aligned_cols=57 Identities=16% Similarity=0.119 Sum_probs=42.5
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
.++.++|||++++||.+++++|+++|++|++.+|++++.+ +..+++ +.++..+++|+
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~D~ 324 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAK-KLAEAL---GDEHLSVQADI 324 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHh---CCceeEEEccC
Confidence 4578999999999999999999999999999998764432 111222 23456677774
No 218
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.99 E-value=5e-09 Score=56.54 Aligned_cols=58 Identities=22% Similarity=0.320 Sum_probs=37.1
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEE-EEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVK-ATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++|||++|++|+++++.|+++|++++ +.++.........+.... ...++.++.+|+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl 60 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVA-QSERFAFEKVDI 60 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcc-cCCceEEEECCC
Confidence 5799999999999999999999998755 444432211111111111 123566777775
No 219
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.99 E-value=2.2e-09 Score=56.75 Aligned_cols=36 Identities=36% Similarity=0.433 Sum_probs=32.9
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
.++|||++|++|++++++|.++|++|+.++|...+.
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~ 37 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGL 37 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccc
Confidence 489999999999999999999999999999976654
No 220
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.99 E-value=3.1e-09 Score=61.78 Aligned_cols=60 Identities=22% Similarity=0.212 Sum_probs=43.5
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcC--CCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDG--AEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Di 64 (64)
.+++++|||++|+||++++++|++.|++|++.+|+.+.... ...++.. ...++..+++|+
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~-~~~~l~~~~~~~~~~~v~~Dv 474 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEA-VAAEINGQFGAGRAVALKMDV 474 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHHHHHhhcCCCcEEEEECCC
Confidence 46789999999999999999999999999999997654321 2222211 123456777775
No 221
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.98 E-value=6.7e-09 Score=51.94 Aligned_cols=58 Identities=19% Similarity=0.230 Sum_probs=43.8
Q ss_pred EEEEecCcchHHHHHHHHHHHCC-CEEEEEEeCCC-Ccch-hHHhhhcCCCCceEEEEccC
Q 036468 7 VVCVTGASGFIASWLVKLLLQRS-YTVKATVRDLN-NHNA-EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~~-~~~~-~~~~~~~~~~~~~~~~~~Di 64 (64)
+++|+|+.|++|..++++|+.++ .+++++.|++. .... +.+.++...+.++..+++|+
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv 62 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDV 62 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--T
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCc
Confidence 58999999999999999999997 68999999832 2222 45666666678899999986
No 222
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.97 E-value=2.7e-09 Score=58.23 Aligned_cols=37 Identities=30% Similarity=0.434 Sum_probs=33.7
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
..+++++|||++|++|++++++|.++|++|++++|..
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~ 55 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKK 55 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecc
Confidence 3568899999999999999999999999999999854
No 223
>PRK08324 short chain dehydrogenase; Validated
Probab=98.96 E-value=3.6e-09 Score=61.46 Aligned_cols=59 Identities=27% Similarity=0.216 Sum_probs=43.8
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
.+++++|||++|++|++++++|+++|++|++++|++.... .....+... .++.++.+|+
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~-~~~~~l~~~-~~v~~v~~Dv 479 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAE-AAAAELGGP-DRALGVACDV 479 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHH-HHHHHHhcc-CcEEEEEecC
Confidence 3578999999999999999999999999999999875432 222222221 3566777764
No 224
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.96 E-value=3.4e-09 Score=56.36 Aligned_cols=36 Identities=42% Similarity=0.610 Sum_probs=32.8
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
++++|||++|++|+++++.|+++|++|++++|++.+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 36 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSD 36 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcc
Confidence 368999999999999999999999999999997654
No 225
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.96 E-value=7.8e-09 Score=59.88 Aligned_cols=60 Identities=23% Similarity=0.325 Sum_probs=40.8
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHC--CCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQR--SYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~--~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+.++++||||+|++|++++++|+++ +++|++.++.........+... ....+++++.+|+
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~-~~~~~v~~~~~Dl 66 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS-KSSPNFKFVKGDI 66 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc-ccCCCeEEEECCC
Confidence 5688999999999999999999987 6889888874321111111111 1134577777775
No 226
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=98.96 E-value=9.7e-09 Score=52.43 Aligned_cols=35 Identities=40% Similarity=0.577 Sum_probs=31.6
Q ss_pred EEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 8 VCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 8 ~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
++|+||+|++|.+++++|+++|+.|+.+.|++...
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~ 35 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSE 35 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGG
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccccc
Confidence 68999999999999999999999999888877654
No 227
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=98.95 E-value=3.2e-09 Score=54.87 Aligned_cols=59 Identities=31% Similarity=0.336 Sum_probs=43.3
Q ss_pred CeEEEEecCcchHHHHHHHHHHHC-CCEEEE-EEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQR-SYTVKA-TVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~-~~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++.++|||+++|||..++++|++. +.++++ ..|+++... +.++......++++.++.|+
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~-~~l~~k~~~d~rvHii~Ldv 63 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAA-TELALKSKSDSRVHIIQLDV 63 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhh-HHHHHhhccCCceEEEEEec
Confidence 466999999999999999999976 455544 456676542 34444444578999999886
No 228
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.95 E-value=7.7e-09 Score=53.80 Aligned_cols=62 Identities=19% Similarity=0.095 Sum_probs=42.8
Q ss_pred CCCeEEEEecCcc--hHHHHHHHHHHHCCCEEEEEEeCCCC--------cch--hHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGASG--FIASWLVKLLLQRSYTVKATVRDLNN--------HNA--EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~~~--~ig~~~~~~l~~~~~~v~~~~r~~~~--------~~~--~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++++|||+++ ++|.+++++|+++|++|++.++.... ... +..+++...+.++..+++|+
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~ 77 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDL 77 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCC
Confidence 3568999999994 89999999999999999987643110 000 11222333456777888875
No 229
>PRK07041 short chain dehydrogenase; Provisional
Probab=98.95 E-value=2.2e-09 Score=54.79 Aligned_cols=54 Identities=15% Similarity=0.078 Sum_probs=40.2
Q ss_pred EEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 9 CVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 9 ~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+|||+++++|++++++|+++|++|++++|+++... ....++. .+.+++++.+|+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~-~~~~~~~-~~~~~~~~~~Dl 54 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLA-AAARALG-GGAPVRTAALDI 54 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHh-cCCceEEEEccC
Confidence 58999999999999999999999999999764432 2222222 245677888875
No 230
>PRK06953 short chain dehydrogenase; Provisional
Probab=98.95 E-value=4.3e-09 Score=53.66 Aligned_cols=36 Identities=33% Similarity=0.327 Sum_probs=32.7
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
++++|||++|++|++++++|+++|++|++++|++.+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~ 37 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAA 37 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHH
Confidence 579999999999999999999999999999987643
No 231
>PRK12742 oxidoreductase; Provisional
Probab=98.93 E-value=7e-09 Score=53.12 Aligned_cols=36 Identities=28% Similarity=0.240 Sum_probs=31.9
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRD 38 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~ 38 (64)
+++++++|||++|++|++++++|+++|++|++.+++
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~ 39 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAG 39 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 346889999999999999999999999999887653
No 232
>PRK12320 hypothetical protein; Provisional
Probab=98.93 E-value=6e-09 Score=60.80 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=31.3
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
|+++|||++|++|+++++.|+++|++|++++|.+
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~ 34 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHP 34 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 3699999999999999999999999999999854
No 233
>PRK07069 short chain dehydrogenase; Validated
Probab=98.92 E-value=8.9e-09 Score=53.07 Aligned_cols=31 Identities=19% Similarity=0.224 Sum_probs=29.8
Q ss_pred EEEecCcchHHHHHHHHHHHCCCEEEEEEeC
Q 036468 8 VCVTGASGFIASWLVKLLLQRSYTVKATVRD 38 (64)
Q Consensus 8 ~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~ 38 (64)
++|||+++++|.++++.|+++|++|++++|+
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~ 32 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDIN 32 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 7899999999999999999999999999987
No 234
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.91 E-value=2e-08 Score=51.88 Aligned_cols=41 Identities=32% Similarity=0.319 Sum_probs=35.8
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
|+.+++.++|||+++++|+++++.|+++|+.|++..+....
T Consensus 1 ~~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~ 41 (251)
T COG1028 1 MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEE 41 (251)
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCch
Confidence 34567899999999999999999999999998888877654
No 235
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=98.91 E-value=5.2e-09 Score=56.15 Aligned_cols=35 Identities=40% Similarity=0.631 Sum_probs=31.3
Q ss_pred EEEEecCcchHHHHHHHHHHHCC--CEEEEEEeCCCC
Q 036468 7 VVCVTGASGFIASWLVKLLLQRS--YTVKATVRDLNN 41 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~--~~v~~~~r~~~~ 41 (64)
+++|||++|++|++++++|+++| ++|+++.|+...
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~ 37 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASE 37 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCH
Confidence 47899999999999999999998 689999997653
No 236
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.90 E-value=1.9e-08 Score=53.72 Aligned_cols=58 Identities=22% Similarity=0.272 Sum_probs=41.5
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEcc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKAN 63 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D 63 (64)
.+.+++||||.|++|++++..|...|++|+++|.-.+..+ ...+......+++.+.-|
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k--~n~~~~~~~~~fel~~hd 83 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRK--ENLEHWIGHPNFELIRHD 83 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccch--hhcchhccCcceeEEEee
Confidence 4578999999999999999999999999999997655443 222222223455555444
No 237
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.89 E-value=1.7e-08 Score=54.14 Aligned_cols=58 Identities=24% Similarity=0.345 Sum_probs=40.6
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCC--EEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSY--TVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++|||++|+||+.++++++++.. +|+.++.-.-......+..+.. .+++.|+++||
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~-~~~~~fv~~DI 60 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED-SPRYRFVQGDI 60 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc-CCCceEEeccc
Confidence 4689999999999999999998764 4666654222222244444433 56899999986
No 238
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.89 E-value=6.6e-09 Score=54.08 Aligned_cols=36 Identities=28% Similarity=0.348 Sum_probs=33.3
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
++++++|||+++++|++++++|+++|++|++.+|++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~ 48 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSK 48 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCc
Confidence 457899999999999999999999999999999876
No 239
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.89 E-value=7.3e-09 Score=54.13 Aligned_cols=35 Identities=23% Similarity=0.169 Sum_probs=30.8
Q ss_pred CCeEEEEecC--cchHHHHHHHHHHHCCCEEEEEEeC
Q 036468 4 KGKVVCVTGA--SGFIASWLVKLLLQRSYTVKATVRD 38 (64)
Q Consensus 4 ~~~~~~i~g~--~~~ig~~~~~~l~~~~~~v~~~~r~ 38 (64)
++++++|||+ +++||.+++++|+++|++|++.+|.
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~ 41 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVG 41 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccc
Confidence 4578999996 6899999999999999999988764
No 240
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=98.89 E-value=6.1e-09 Score=55.22 Aligned_cols=33 Identities=42% Similarity=0.656 Sum_probs=29.8
Q ss_pred EEecCcchHHHHHHHHHHHCC--CEEEEEEeCCCC
Q 036468 9 CVTGASGFIASWLVKLLLQRS--YTVKATVRDLNN 41 (64)
Q Consensus 9 ~i~g~~~~ig~~~~~~l~~~~--~~v~~~~r~~~~ 41 (64)
+||||+|++|++++++|+++| ++|.++++.+..
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~ 35 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPP 35 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccc
Confidence 589999999999999999999 789999987654
No 241
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=98.89 E-value=1.5e-08 Score=51.92 Aligned_cols=50 Identities=28% Similarity=0.346 Sum_probs=35.2
Q ss_pred eEEEEecCcchHHHHHHHHHHHCC--CEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRS--YTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|+++|||++++||++++++|++++ ..+....|+..+. . ...++.++++|+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-------~--~~~~~~~~~~Dl 52 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-------F--QHDNVQWHALDV 52 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-------c--ccCceEEEEecC
Confidence 468999999999999999999985 5666555544221 0 124566777764
No 242
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.88 E-value=9.5e-09 Score=59.13 Aligned_cols=58 Identities=31% Similarity=0.338 Sum_probs=39.3
Q ss_pred eEEEEecCcchHHHHHHHHHH--HCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLL--QRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~--~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|+++|||++|++|++++++|+ ..+++|++++|++.......+.... ...+++++.+|+
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~-~~~~v~~~~~Dl 60 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYW-GADRVVPLVGDL 60 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhc-CCCcEEEEeccc
Confidence 369999999999999999999 4789999999965332111111111 113566666664
No 243
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.88 E-value=1.4e-08 Score=58.00 Aligned_cols=60 Identities=27% Similarity=0.263 Sum_probs=45.2
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeCCCCcch--hHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS-YTVKATVRDLNNHNA--EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Di 64 (64)
++++++||||+|.+|+.+|+++++.+ .+++++++++.+... ..+.+.. +..++.++.+||
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~-~~~~~~~~igdV 311 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKF-PELKLRFYIGDV 311 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhC-CCcceEEEeccc
Confidence 57899999999999999999999998 578898998876543 2222211 245677777775
No 244
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=98.87 E-value=2e-08 Score=53.85 Aligned_cols=41 Identities=12% Similarity=0.031 Sum_probs=34.9
Q ss_pred CCCCCeEEEEecC--cchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 1 MSGKGKVVCVTGA--SGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 1 ~~~~~~~~~i~g~--~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
|.+++++++|||+ +++||.++++.|++.|++|++ .|..+.+
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l 47 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL 47 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence 3467899999999 799999999999999999988 6655443
No 245
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.87 E-value=1.5e-08 Score=53.55 Aligned_cols=57 Identities=28% Similarity=0.377 Sum_probs=37.2
Q ss_pred EEEEecCcchHHHHHHHHHHHCC--CEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 7 VVCVTGASGFIASWLVKLLLQRS--YTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++|||++|++|.+++++|++.+ ++|++.++.........+..+.. ..+++++.+|+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl 59 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDI 59 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCC
Confidence 47999999999999999999887 78888776432111112222211 23566677664
No 246
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.87 E-value=6.7e-09 Score=54.67 Aligned_cols=35 Identities=26% Similarity=0.337 Sum_probs=32.3
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
+++|||++|++|++++++|++.|++|.+..|++.+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~ 35 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSS 35 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 37899999999999999999999999999998764
No 247
>PRK07577 short chain dehydrogenase; Provisional
Probab=98.87 E-value=1.2e-08 Score=52.24 Aligned_cols=38 Identities=26% Similarity=0.150 Sum_probs=34.0
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
.+++++|||++|++|.+++++|+++|++|++++|++.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~ 39 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID 39 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 35789999999999999999999999999999987543
No 248
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.85 E-value=1.6e-08 Score=50.64 Aligned_cols=55 Identities=15% Similarity=0.173 Sum_probs=38.1
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhh-hcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLT-LDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~Di 64 (64)
|+++|+|++|+ +..+++.|+++|++|.+.+|++... +.+.. +.. ..++.++.+|+
T Consensus 1 m~vlVtGGtG~-gg~la~~L~~~G~~V~v~~R~~~~~--~~l~~~l~~-~~~i~~~~~Dv 56 (177)
T PRK08309 1 MHALVIGGTGM-LKRVSLWLCEKGFHVSVIARREVKL--ENVKRESTT-PESITPLPLDY 56 (177)
T ss_pred CEEEEECcCHH-HHHHHHHHHHCcCEEEEEECCHHHH--HHHHHHhhc-CCcEEEEEccC
Confidence 46899999965 4569999999999999999875433 22222 222 34667777775
No 249
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=98.85 E-value=2.1e-08 Score=51.23 Aligned_cols=59 Identities=24% Similarity=0.219 Sum_probs=44.3
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+.+.+++||++++||+++++.|++.|++|.+.+++....+ .....+..+ .+...+.+|+
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~-ata~~L~g~-~~h~aF~~DV 71 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAE-ATAGDLGGY-GDHSAFSCDV 71 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHH-HHHhhcCCC-Cccceeeecc
Confidence 3567899999999999999999999999999998776443 344444442 3445666664
No 250
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.84 E-value=2.6e-08 Score=53.73 Aligned_cols=58 Identities=26% Similarity=0.308 Sum_probs=36.0
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCE-EEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYT-VKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|+++|||++|++|++++++|++.|+. |+..++............+. ...+++++.+|+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl 59 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVS-DSERYVFEHADI 59 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcc-cCCceEEEEecC
Confidence 36999999999999999999999875 44444422111111222211 123566777775
No 251
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.82 E-value=1e-08 Score=53.76 Aligned_cols=35 Identities=26% Similarity=0.355 Sum_probs=32.1
Q ss_pred EEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 8 VCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 8 ~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
++|||++|++|+++++.|++.|++|++++|++.+.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 35 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAG 35 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCC
Confidence 58999999999999999999999999999987654
No 252
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=98.82 E-value=3.9e-08 Score=52.17 Aligned_cols=32 Identities=31% Similarity=0.379 Sum_probs=28.9
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeC
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRD 38 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~ 38 (64)
+++|+|++|++|..+++.|+++|++|++.++.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~ 32 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNL 32 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 47899999999999999999999999887653
No 253
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.80 E-value=3.5e-08 Score=51.34 Aligned_cols=38 Identities=37% Similarity=0.538 Sum_probs=34.4
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHN 43 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~ 43 (64)
++++|+|++|++|++++++|++.+++|.+..|+++...
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~ 38 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAA 38 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHH
Confidence 36899999999999999999999999999999886653
No 254
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.75 E-value=6e-08 Score=54.01 Aligned_cols=36 Identities=28% Similarity=0.234 Sum_probs=32.6
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
.+++++|||++|++|.+++++|+++|++|++++++.
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~ 244 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPA 244 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 457899999999999999999999999999988753
No 255
>PLN02996 fatty acyl-CoA reductase
Probab=98.74 E-value=1.5e-07 Score=53.32 Aligned_cols=39 Identities=28% Similarity=0.451 Sum_probs=32.9
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC---CEEEEEEeCCCCc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS---YTVKATVRDLNNH 42 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~---~~v~~~~r~~~~~ 42 (64)
++++++|||++|++|+.+++.|++.+ .+|+++.|..+..
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~ 51 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAK 51 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCC
Confidence 56889999999999999999999754 4789999976543
No 256
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=98.73 E-value=1.2e-07 Score=51.97 Aligned_cols=60 Identities=23% Similarity=0.289 Sum_probs=42.5
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC--CEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS--YTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++.+++||||+|++|.+++++|++.+ .+|.++|..+......+ +.......+++.+++|+
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~-e~~~~~~~~v~~~~~D~ 64 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPA-ELTGFRSGRVTVILGDL 64 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccch-hhhcccCCceeEEecch
Confidence 56789999999999999999999998 78999998775322211 11111245667776664
No 257
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.73 E-value=6.6e-08 Score=50.37 Aligned_cols=55 Identities=31% Similarity=0.484 Sum_probs=36.2
Q ss_pred EecCcchHHHHHHHHHHHCCC--EEEEEEeCCCCcch-hHHh-hhcC----------CCCceEEEEccC
Q 036468 10 VTGASGFIASWLVKLLLQRSY--TVKATVRDLNNHNA-EHLL-TLDG----------AEERLHLFKANS 64 (64)
Q Consensus 10 i~g~~~~ig~~~~~~l~~~~~--~v~~~~r~~~~~~~-~~~~-~~~~----------~~~~~~~~~~Di 64 (64)
+||++|++|.+++.+|++.+. +|+++.|..+.... +.+. .+.. ...+++++.+|+
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl 69 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDL 69 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--T
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccc
Confidence 699999999999999999876 99999997755322 3331 1111 146889999986
No 258
>PRK05865 hypothetical protein; Provisional
Probab=98.72 E-value=6.8e-08 Score=57.59 Aligned_cols=34 Identities=32% Similarity=0.363 Sum_probs=31.5
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
|+++|||++|++|++++++|+++|++|++++|+.
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~ 34 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHR 34 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCc
Confidence 3699999999999999999999999999999864
No 259
>PLN00016 RNA-binding protein; Provisional
Probab=98.71 E-value=3.4e-08 Score=54.00 Aligned_cols=38 Identities=26% Similarity=0.343 Sum_probs=34.4
Q ss_pred CCeEEEEe----cCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 4 KGKVVCVT----GASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 4 ~~~~~~i~----g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
+.++++|| |++|++|++++++|+++|++|++++|++..
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~ 92 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP 92 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc
Confidence 34689999 999999999999999999999999998654
No 260
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.71 E-value=2.5e-08 Score=53.29 Aligned_cols=36 Identities=42% Similarity=0.365 Sum_probs=31.1
Q ss_pred EEEecCcchHHHHHHHHHHHCC-CEEEEEEeCCCCcc
Q 036468 8 VCVTGASGFIASWLVKLLLQRS-YTVKATVRDLNNHN 43 (64)
Q Consensus 8 ~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~~~~~ 43 (64)
++||||+|.||+.+++++++.+ ..++++++++.+..
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~ 37 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLY 37 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHH
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHH
Confidence 6899999999999999999998 68999999876553
No 261
>PLN02778 3,5-epimerase/4-reductase
Probab=98.70 E-value=6.6e-08 Score=51.60 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=29.4
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEe
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVR 37 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r 37 (64)
.|+++|||++|++|++++++|+++|++|+....
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~ 41 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG 41 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC
Confidence 478999999999999999999999999976543
No 262
>PLN02503 fatty acyl-CoA reductase 2
Probab=98.69 E-value=1.8e-07 Score=54.17 Aligned_cols=39 Identities=26% Similarity=0.496 Sum_probs=32.9
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC---CEEEEEEeCCCCc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS---YTVKATVRDLNNH 42 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~---~~v~~~~r~~~~~ 42 (64)
++++++|||++|++|+.+++.|++.+ .+|+++.|..+..
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~ 159 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKE 159 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCch
Confidence 46889999999999999999999865 3789999976543
No 263
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.66 E-value=4.9e-08 Score=52.01 Aligned_cols=33 Identities=15% Similarity=0.051 Sum_probs=29.1
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
|+++|||++|++|++++++|++.| +|++++|..
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~ 33 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHS 33 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEecccc
Confidence 479999999999999999999988 788888754
No 264
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.65 E-value=8.8e-08 Score=50.93 Aligned_cols=32 Identities=41% Similarity=0.531 Sum_probs=27.7
Q ss_pred EEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 8 VCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 8 ~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
++||||+|++|++++++|++.|++++++.++.
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~ 33 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNL 33 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCC
Confidence 68999999999999999999999766665543
No 265
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.63 E-value=7.8e-08 Score=51.09 Aligned_cols=36 Identities=22% Similarity=0.284 Sum_probs=33.0
Q ss_pred EEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcc
Q 036468 8 VCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHN 43 (64)
Q Consensus 8 ~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~ 43 (64)
++|||++|+||++++..|.+.|++|+++.|++.+..
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~ 36 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKAS 36 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchh
Confidence 579999999999999999999999999999887654
No 266
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=98.62 E-value=1.7e-07 Score=49.65 Aligned_cols=60 Identities=22% Similarity=0.212 Sum_probs=43.5
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCC-----EEEEEEeCCCCcchhHHhhhcC----CCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSY-----TVKATVRDLNNHNAEHLLTLDG----AEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~-----~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Di 64 (64)
+.+.++|||+++++|.+++.+|++... ++++.+|+..+.+. .+.++.. ...+++.+..|+
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~-vc~~lk~f~p~~~i~~~yvlvD~ 70 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEA-VCAALKAFHPKSTIEVTYVLVDV 70 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHH-HHHHHHHhCCCceeEEEEEEEeh
Confidence 457899999999999999999998753 57788898877663 3333332 234667777764
No 267
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.60 E-value=1.1e-07 Score=49.99 Aligned_cols=33 Identities=27% Similarity=0.278 Sum_probs=30.4
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+++|+|++|++|++++++|++.|++|+++.|+.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~ 33 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQ 33 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcc
Confidence 479999999999999999999999999998863
No 268
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.60 E-value=2.1e-07 Score=47.13 Aligned_cols=38 Identities=32% Similarity=0.385 Sum_probs=34.6
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHN 43 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~ 43 (64)
|++.|.|++|.+|+.++++..++|++|+++.|++.+.+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~ 38 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLA 38 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcc
Confidence 46788899999999999999999999999999987764
No 269
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.55 E-value=2.4e-07 Score=47.66 Aligned_cols=33 Identities=39% Similarity=0.571 Sum_probs=31.1
Q ss_pred EEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 8 VCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 8 ~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
++|+|++|.+|+.+++.|++.+++|.++.|++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~ 33 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS 33 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc
Confidence 689999999999999999999999999999884
No 270
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=98.53 E-value=8.6e-07 Score=49.20 Aligned_cols=33 Identities=18% Similarity=0.033 Sum_probs=29.2
Q ss_pred CeEEEEecCcchHHHH--HHHHHHHCCCEEEEEEeC
Q 036468 5 GKVVCVTGASGFIASW--LVKLLLQRSYTVKATVRD 38 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~--~~~~l~~~~~~v~~~~r~ 38 (64)
+++++|||+++++|.+ +++.| ..|++++++++.
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~ 75 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFE 75 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecC
Confidence 4789999999999999 89999 999998888753
No 271
>PRK07578 short chain dehydrogenase; Provisional
Probab=98.52 E-value=3.8e-07 Score=45.91 Aligned_cols=33 Identities=33% Similarity=0.299 Sum_probs=30.2
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
+++|||+++++|.+++++|+++ ++|++.+|++.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~ 34 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG 34 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC
Confidence 6899999999999999999998 99999998653
No 272
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.52 E-value=5e-07 Score=48.50 Aligned_cols=36 Identities=17% Similarity=0.086 Sum_probs=32.0
Q ss_pred CCCeEEEEecCc--chHHHHHHHHHHHCCCEEEEEEeC
Q 036468 3 GKGKVVCVTGAS--GFIASWLVKLLLQRSYTVKATVRD 38 (64)
Q Consensus 3 ~~~~~~~i~g~~--~~ig~~~~~~l~~~~~~v~~~~r~ 38 (64)
.+++.++|||++ ++||.++++.|+++|++|++.++.
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 357899999995 899999999999999999997754
No 273
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.52 E-value=8.9e-07 Score=44.84 Aligned_cols=39 Identities=33% Similarity=0.291 Sum_probs=35.5
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
.++.+++||+.-+||+.++++|++.|.+|+.+.|++.+.
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L 44 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANL 44 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHH
Confidence 568899999999999999999999999999999987544
No 274
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.48 E-value=5.1e-07 Score=48.75 Aligned_cols=59 Identities=17% Similarity=0.058 Sum_probs=43.2
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcch-hHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNA-EHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~Di 64 (64)
..++|||++.++|++++..+...|.+|.++.|+..+... .+.-++......+.+..+|+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~ 93 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDV 93 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEecccc
Confidence 578999999999999999999999999999998876643 22112212123356776664
No 275
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=98.47 E-value=5.1e-07 Score=48.07 Aligned_cols=37 Identities=41% Similarity=0.507 Sum_probs=32.2
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
|+++|+|++|.+|.++.++|.+.+++++...|+.-..
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~~dl 37 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRSDLDL 37 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTTCS-T
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCchhcCC
Confidence 6899999999999999999999999999997765443
No 276
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=98.47 E-value=1.9e-06 Score=46.55 Aligned_cols=58 Identities=22% Similarity=0.217 Sum_probs=43.8
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
..+.|+|||+.++.|..++++|.+.|+.|++.+..++.. +.+..... .+++..++.||
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~ga--e~L~~~~~-s~rl~t~~LDV 85 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGA--ESLRGETK-SPRLRTLQLDV 85 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchH--HHHhhhhc-CCcceeEeecc
Confidence 457799999999999999999999999999999655443 22222221 46777777775
No 277
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.45 E-value=2e-06 Score=43.58 Aligned_cols=57 Identities=18% Similarity=0.120 Sum_probs=43.7
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++-..++||+.+++|++.++.|+.+|..|.+.+.+..+.. +..+++ +.++.|...|+
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~-~vakel---g~~~vf~padv 64 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGA-DVAKEL---GGKVVFTPADV 64 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccch-HHHHHh---CCceEEecccc
Confidence 4567899999999999999999999999999998776654 344444 44555555543
No 278
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.44 E-value=1.8e-06 Score=44.92 Aligned_cols=39 Identities=38% Similarity=0.394 Sum_probs=33.2
Q ss_pred CCeEEEEecC-cchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 4 KGKVVCVTGA-SGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 4 ~~~~~~i~g~-~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
..+.++|||+ .||||.+++++|.+.|+.|+...|..++-
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M 45 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPM 45 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchH
Confidence 3567777776 68999999999999999999999987664
No 279
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.44 E-value=1.5e-06 Score=47.92 Aligned_cols=59 Identities=31% Similarity=0.452 Sum_probs=42.0
Q ss_pred eEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeCCCCcch-hHHhhh-c-------CCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRS-YTVKATVRDLNNHNA-EHLLTL-D-------GAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~~~~~~-~~~~~~-~-------~~~~~~~~~~~Di 64 (64)
+++++|||+|++|..++.+|+..- .+|++..|-.+.... +.+++. . ....+++.+.+|+
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl 69 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDL 69 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEeccc
Confidence 368999999999999999998775 699999997664322 333222 1 2346777777764
No 280
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.44 E-value=5e-07 Score=47.98 Aligned_cols=32 Identities=38% Similarity=0.434 Sum_probs=28.4
Q ss_pred EEEecCcchHHHHHHHHHHHCCC-EEEEEEeCC
Q 036468 8 VCVTGASGFIASWLVKLLLQRSY-TVKATVRDL 39 (64)
Q Consensus 8 ~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~~ 39 (64)
++|||++|++|+++++.|.++|+ +|++++|..
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~ 33 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLR 33 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCC
Confidence 58999999999999999999997 788887654
No 281
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.41 E-value=1.4e-06 Score=46.62 Aligned_cols=35 Identities=23% Similarity=0.089 Sum_probs=30.9
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCE-EEEEEeCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYT-VKATVRDL 39 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~-v~~~~r~~ 39 (64)
++++++|+|+ |++|++++..|+..|.+ |++++|++
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 4578999999 79999999999999975 99999986
No 282
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.41 E-value=1.3e-06 Score=56.91 Aligned_cols=34 Identities=18% Similarity=0.037 Sum_probs=31.6
Q ss_pred CeEEEEecCcchHHHHHHHHHHHC-CCEEEEEEeC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQR-SYTVKATVRD 38 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~-~~~v~~~~r~ 38 (64)
+++++|||++++||..++++|+++ +++|++++|+
T Consensus 1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813 1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 568999999999999999999988 6999999998
No 283
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.39 E-value=1.6e-06 Score=43.77 Aligned_cols=40 Identities=30% Similarity=0.329 Sum_probs=34.9
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
.+++++++.|++|++|+.+++.|++.+++|++++|+.++.
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~ 65 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERA 65 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 3567899999999999999999999999999999876543
No 284
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.33 E-value=4.8e-06 Score=44.89 Aligned_cols=60 Identities=35% Similarity=0.525 Sum_probs=44.4
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchh--HHhhhcC-CCCceEEEEccC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAE--HLLTLDG-AEERLHLFKANS 64 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~--~~~~~~~-~~~~~~~~~~Di 64 (64)
.++.+|||-+|.-|..+++.|+..||.|+.+.|........ ++.+... ...+++++.+|+
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDL 64 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDL 64 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccc
Confidence 47899999999999999999999999999999875443222 2223222 245577887775
No 285
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.32 E-value=2.7e-06 Score=47.24 Aligned_cols=54 Identities=19% Similarity=0.201 Sum_probs=39.7
Q ss_pred eEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRS-YTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
++++|.|+ |++|+.++..|++++ .+|++.+|++++.. .+.... ..+++..+.|+
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~--~i~~~~--~~~v~~~~vD~ 56 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCA--RIAELI--GGKVEALQVDA 56 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHH--HHHhhc--cccceeEEecc
Confidence 57888888 999999999999998 89999999876543 222221 22566666663
No 286
>PRK09620 hypothetical protein; Provisional
Probab=98.31 E-value=3.2e-06 Score=44.04 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=29.9
Q ss_pred CCeEEEEecCc----------------chHHHHHHHHHHHCCCEEEEEEe
Q 036468 4 KGKVVCVTGAS----------------GFIASWLVKLLLQRSYTVKATVR 37 (64)
Q Consensus 4 ~~~~~~i~g~~----------------~~ig~~~~~~l~~~~~~v~~~~r 37 (64)
.+++++||+|. |++|++++++|+.+|++|++++.
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g 51 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHG 51 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeC
Confidence 46788888775 99999999999999999998875
No 287
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.30 E-value=4.3e-06 Score=51.79 Aligned_cols=38 Identities=37% Similarity=0.593 Sum_probs=32.4
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCC----CEEEEEEeCCCCc
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRS----YTVKATVRDLNNH 42 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~----~~v~~~~r~~~~~ 42 (64)
.+++++||++|++|.+++.+|++.+ ++|++..|+....
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~ 1012 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEE 1012 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChH
Confidence 4689999999999999999999876 7888888876543
No 288
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=98.26 E-value=9.8e-07 Score=45.59 Aligned_cols=51 Identities=18% Similarity=0.151 Sum_probs=35.6
Q ss_pred cCc--chHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 12 GAS--GFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 12 g~~--~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|++ ++||.++++.|+++|++|++.+|+..+.. +.++++..... .+.+++|+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~-~~~~~l~~~~~-~~~~~~D~ 53 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLA-DALEELAKEYG-AEVIQCDL 53 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHH-HHHHHHHHHTT-SEEEESCT
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHHHHHcC-CceEeecC
Confidence 455 99999999999999999999999887543 23333332111 22577774
No 289
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.25 E-value=8.2e-06 Score=45.70 Aligned_cols=38 Identities=34% Similarity=0.198 Sum_probs=33.6
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
|.+++++++|+|+++ +|.++++.|++.|++|++++++.
T Consensus 1 ~~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~ 38 (450)
T PRK14106 1 MELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKE 38 (450)
T ss_pred CCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCc
Confidence 445678899999888 99999999999999999999865
No 290
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.21 E-value=5.7e-06 Score=46.16 Aligned_cols=37 Identities=24% Similarity=0.214 Sum_probs=32.5
Q ss_pred CCCeEEEEecC----------------cchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 3 GKGKVVCVTGA----------------SGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 3 ~~~~~~~i~g~----------------~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+.+++++|||| +|.+|.+++++|..+|++|++++++.
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~ 238 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPV 238 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCc
Confidence 35688999999 77799999999999999999988754
No 291
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.13 E-value=2.2e-05 Score=44.01 Aligned_cols=39 Identities=21% Similarity=0.029 Sum_probs=34.1
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
|...+++++|+|+++ +|.+.++.|++.|++|.+.+++..
T Consensus 1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~ 39 (447)
T PRK02472 1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPF 39 (447)
T ss_pred CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCc
Confidence 556678899999987 999999999999999999987654
No 292
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.11 E-value=2.7e-06 Score=45.09 Aligned_cols=29 Identities=24% Similarity=0.295 Sum_probs=25.3
Q ss_pred EEecCcchHHHHHHHHHHHCCCEEEEEEe
Q 036468 9 CVTGASGFIASWLVKLLLQRSYTVKATVR 37 (64)
Q Consensus 9 ~i~g~~~~ig~~~~~~l~~~~~~v~~~~r 37 (64)
+||||+|++|+++++.|++.|++|++..+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~ 29 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRT 29 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeec
Confidence 58999999999999999999988776543
No 293
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.10 E-value=1.9e-05 Score=38.04 Aligned_cols=40 Identities=28% Similarity=0.189 Sum_probs=33.4
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCE-EEEEEeCCCCcc
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYT-VKATVRDLNNHN 43 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~-v~~~~r~~~~~~ 43 (64)
.++++++|.|+ |++|++++..|...|.+ |+++.|+.++.+
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~ 50 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAE 50 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHH
T ss_pred cCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHH
Confidence 45788999987 88999999999999965 999999876543
No 294
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.09 E-value=7.7e-06 Score=47.83 Aligned_cols=29 Identities=21% Similarity=0.292 Sum_probs=26.6
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEE
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVK 33 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~ 33 (64)
.|+++|||++|++|+++++.|.+.|++|.
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~ 408 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYE 408 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEE
Confidence 46899999999999999999999999883
No 295
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.03 E-value=1.1e-05 Score=44.18 Aligned_cols=40 Identities=23% Similarity=0.198 Sum_probs=33.0
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHC-C-CEEEEEEeCCCCc
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQR-S-YTVKATVRDLNNH 42 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~-~-~~v~~~~r~~~~~ 42 (64)
..+++++|+|++|.+|+.++++|+.+ + .+++++.|++.+.
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl 194 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERL 194 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHH
Confidence 35688999999999999999999864 5 6888888875543
No 296
>PRK06849 hypothetical protein; Provisional
Probab=97.93 E-value=5e-05 Score=42.04 Aligned_cols=38 Identities=26% Similarity=0.101 Sum_probs=34.2
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
++++++|||+...++..+++.|.+.|++|++++.++..
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~ 40 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP 40 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 56889999999999999999999999999999887543
No 297
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=97.92 E-value=2.9e-05 Score=43.55 Aligned_cols=40 Identities=40% Similarity=0.624 Sum_probs=35.7
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHN 43 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~ 43 (64)
+.+.|++.|++|.+|+-+++.|.++|+.|.+..|+.....
T Consensus 78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~ 117 (411)
T KOG1203|consen 78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAE 117 (411)
T ss_pred CCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhh
Confidence 4678999999999999999999999999999999876543
No 298
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=97.89 E-value=0.00013 Score=41.66 Aligned_cols=39 Identities=31% Similarity=0.516 Sum_probs=32.2
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC---CEEEEEEeCCCCc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS---YTVKATVRDLNNH 42 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~---~~v~~~~r~~~~~ 42 (64)
.++++++|||+|++|+-+++.+++.. .++++.-|.....
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~ 52 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGK 52 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCC
Confidence 46889999999999999999999864 4778888865544
No 299
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=97.87 E-value=4.9e-05 Score=39.20 Aligned_cols=36 Identities=22% Similarity=0.228 Sum_probs=31.8
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
++.+.|++|.+|.+++..|++.|++|.+++|+++..
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~ 37 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKA 37 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHH
Confidence 578889999999999999999999999998876554
No 300
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=97.84 E-value=0.00014 Score=39.63 Aligned_cols=35 Identities=31% Similarity=0.432 Sum_probs=30.7
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+..+-+.||+|++|+.++.+|.+.|.+|++-+|-.
T Consensus 61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d 95 (391)
T KOG2865|consen 61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGD 95 (391)
T ss_pred ceEEEEecccccccHHHHHHHhhcCCeEEEeccCC
Confidence 44566889999999999999999999999999854
No 301
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.80 E-value=6.9e-05 Score=41.42 Aligned_cols=53 Identities=23% Similarity=0.365 Sum_probs=35.2
Q ss_pred EEEecCcchHHHHHHHHHHHCC-C-EEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 8 VCVTGASGFIASWLVKLLLQRS-Y-TVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 8 ~~i~g~~~~ig~~~~~~l~~~~-~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
|+|.|+ |.+|+.+++.|++.. . +|++.+|+..+.+ +...++ ...++.+++.|+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~-~~~~~~--~~~~~~~~~~d~ 55 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAE-RLAEKL--LGDRVEAVQVDV 55 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHH-HHHT----TTTTEEEEE--T
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHH-HHHhhc--cccceeEEEEec
Confidence 578899 999999999999986 4 8999999886543 122221 245777777764
No 302
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.77 E-value=6.1e-05 Score=40.20 Aligned_cols=38 Identities=26% Similarity=0.308 Sum_probs=32.9
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeCCCCc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS-YTVKATVRDLNNH 42 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~~~~ 42 (64)
.+++++|+|+ |++|++++..|...| .+|+++.|+.++.
T Consensus 122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a 160 (278)
T PRK00258 122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERA 160 (278)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence 4578999987 899999999999999 7999999987654
No 303
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.76 E-value=0.00017 Score=39.43 Aligned_cols=36 Identities=25% Similarity=0.165 Sum_probs=30.6
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCC-------CEEEEEEeCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRS-------YTVKATVRDLN 40 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~-------~~v~~~~r~~~ 40 (64)
+.++.|+|++|++|.+++..|+..+ .+++++++++.
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~ 44 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPA 44 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCc
Confidence 4679999999999999999998744 58999998653
No 304
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.72 E-value=0.0003 Score=36.65 Aligned_cols=35 Identities=14% Similarity=0.147 Sum_probs=28.8
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
+++|. |.|.+|.++++.|.+.|++|++++++++..
T Consensus 2 ~iiIi-G~G~vG~~va~~L~~~g~~Vv~Id~d~~~~ 36 (225)
T COG0569 2 KIIII-GAGRVGRSVARELSEEGHNVVLIDRDEERV 36 (225)
T ss_pred EEEEE-CCcHHHHHHHHHHHhCCCceEEEEcCHHHH
Confidence 45555 556699999999999999999999987653
No 305
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=97.71 E-value=0.00014 Score=37.93 Aligned_cols=34 Identities=9% Similarity=0.067 Sum_probs=27.2
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
.+++--.++|++|.+++++|+++|++|++++++.
T Consensus 17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~ 50 (229)
T PRK06732 17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKT 50 (229)
T ss_pred ceeecCccchHHHHHHHHHHHhCCCEEEEEECcc
Confidence 3444445678899999999999999999988653
No 306
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.68 E-value=8.5e-05 Score=42.90 Aligned_cols=37 Identities=24% Similarity=0.205 Sum_probs=31.8
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
++++++|+|+ |++|++++..|++.|++|++++|+..+
T Consensus 378 ~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~ 414 (529)
T PLN02520 378 AGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYER 414 (529)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 4578999998 699999999999999999998886543
No 307
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=97.67 E-value=0.00017 Score=38.27 Aligned_cols=36 Identities=17% Similarity=0.148 Sum_probs=31.7
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
|+++|+||++. |+.+++.|.+.|++|++..+++...
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~ 36 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGK 36 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcc
Confidence 46999999998 9999999999999999998876543
No 308
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=97.67 E-value=0.00014 Score=39.11 Aligned_cols=36 Identities=28% Similarity=0.295 Sum_probs=30.5
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcc
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHN 43 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~ 43 (64)
+++|||++|.+|.++++.+. .+++|+..++..-...
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~~Dit 37 (281)
T COG1091 2 KILITGANGQLGTELRRALP-GEFEVIATDRAELDIT 37 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-CCceEEeccCcccccc
Confidence 49999999999999999988 6799999988764433
No 309
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.64 E-value=0.0003 Score=37.41 Aligned_cols=37 Identities=24% Similarity=0.233 Sum_probs=31.9
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
+++++++|+ |++|++++..++..|++|.+++|++.+.
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~ 153 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKA 153 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 567899998 7999999999999999999999876543
No 310
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.64 E-value=0.00032 Score=35.95 Aligned_cols=38 Identities=24% Similarity=0.245 Sum_probs=32.0
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
+.++++.|.|. |.+|+.+++.|.+.|++|++.++++..
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~ 63 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEA 63 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 35678989887 479999999999999999998887543
No 311
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.64 E-value=0.0005 Score=38.67 Aligned_cols=36 Identities=39% Similarity=0.520 Sum_probs=31.1
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
.++++|.|. |.+|..+++.|.+.|++|++++++++.
T Consensus 231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~ 266 (453)
T PRK09496 231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPER 266 (453)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 467888877 889999999999999999999987754
No 312
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.63 E-value=0.00016 Score=40.92 Aligned_cols=36 Identities=22% Similarity=0.538 Sum_probs=31.8
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
|++.+.|+.|.+|.+++..|.+.|++|++++|++..
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~ 36 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKK 36 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence 367889999999999999999999999999987654
No 313
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=97.61 E-value=0.00026 Score=39.66 Aligned_cols=36 Identities=22% Similarity=0.200 Sum_probs=30.3
Q ss_pred CCCeEEEEecCc----------------chHHHHHHHHHHHCCCEEEEEEeC
Q 036468 3 GKGKVVCVTGAS----------------GFIASWLVKLLLQRSYTVKATVRD 38 (64)
Q Consensus 3 ~~~~~~~i~g~~----------------~~ig~~~~~~l~~~~~~v~~~~r~ 38 (64)
+++++++|||+. |.+|.++++.+..+|++|+++.++
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~ 234 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGP 234 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCC
Confidence 356889999983 359999999999999999988764
No 314
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=97.61 E-value=0.00025 Score=38.48 Aligned_cols=60 Identities=22% Similarity=0.318 Sum_probs=38.6
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHC--CCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQR--SYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~--~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+.++++|||++|+||+.++..+... .++.+.++.=.--...+.+++.. ..++++++++|+
T Consensus 5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~-n~p~ykfv~~di 66 (331)
T KOG0747|consen 5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR-NSPNYKFVEGDI 66 (331)
T ss_pred ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc-cCCCceEeeccc
Confidence 4578999999999999999998876 35555544211111013333332 257888888875
No 315
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.59 E-value=0.00055 Score=38.48 Aligned_cols=35 Identities=20% Similarity=0.186 Sum_probs=30.3
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
|+++|.|+ |.+|.++++.|.+.|++|+++++++..
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~ 35 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEER 35 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHH
Confidence 36788887 999999999999999999999987654
No 316
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.53 E-value=0.00032 Score=37.68 Aligned_cols=42 Identities=19% Similarity=0.116 Sum_probs=33.6
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcc
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHN 43 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~ 43 (64)
|+....++-+.|+ |.+|..++..++..|++|++.+++++..+
T Consensus 1 ~~~~~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~ 42 (286)
T PRK07819 1 MSDAIQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELAT 42 (286)
T ss_pred CCCCccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence 4433456767765 78999999999999999999999887653
No 317
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.53 E-value=0.00027 Score=34.34 Aligned_cols=38 Identities=29% Similarity=0.268 Sum_probs=31.9
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeCCCCc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS-YTVKATVRDLNNH 42 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~~~~ 42 (64)
+.+++.+.|+ |.+|.++++.+.+.+ .+|.+++|++++.
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~ 56 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKA 56 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHH
Confidence 4577889987 899999999999986 7899999876554
No 318
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.51 E-value=0.002 Score=30.46 Aligned_cols=33 Identities=24% Similarity=0.495 Sum_probs=25.8
Q ss_pred EEEEecCcchHHHHHHHHHHHCC-CEEEE-EEeCC
Q 036468 7 VVCVTGASGFIASWLVKLLLQRS-YTVKA-TVRDL 39 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~-~~v~~-~~r~~ 39 (64)
++.|.|++|++|..+++.|.++- .++.. ..++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc
Confidence 57899999999999999999974 56544 44444
No 319
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=97.50 E-value=0.00037 Score=36.38 Aligned_cols=33 Identities=9% Similarity=0.132 Sum_probs=27.4
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEe
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVR 37 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r 37 (64)
+-+++--.++|++|.++++.|+++|++|+++++
T Consensus 15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~ 47 (227)
T TIGR02114 15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTT 47 (227)
T ss_pred CceeecCCcccHHHHHHHHHHHHCCCEEEEEcC
Confidence 345555566889999999999999999999875
No 320
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=97.50 E-value=0.00075 Score=36.56 Aligned_cols=38 Identities=16% Similarity=0.289 Sum_probs=32.4
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
|+++.+++.|. |.|.+|..++..|.+.|++|.++.|++
T Consensus 1 ~~~~~m~I~Ii-G~GaiG~~lA~~L~~~g~~V~~~~r~~ 38 (313)
T PRK06249 1 MDSETPRIGII-GTGAIGGFYGAMLARAGFDVHFLLRSD 38 (313)
T ss_pred CCCcCcEEEEE-CCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 55666778887 667899999999999999999999975
No 321
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=97.48 E-value=0.00026 Score=35.69 Aligned_cols=35 Identities=26% Similarity=0.337 Sum_probs=28.4
Q ss_pred EEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcc
Q 036468 8 VCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHN 43 (64)
Q Consensus 8 ~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~ 43 (64)
+.|.|+ |.+|..++..++..|++|.+.+++++...
T Consensus 2 V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~ 36 (180)
T PF02737_consen 2 VAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALE 36 (180)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHH
T ss_pred EEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHH
Confidence 556666 89999999999999999999999876543
No 322
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.46 E-value=0.00052 Score=37.64 Aligned_cols=36 Identities=19% Similarity=0.361 Sum_probs=28.5
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCC---EEEEEEeCCCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSY---TVKATVRDLNN 41 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~---~v~~~~r~~~~ 41 (64)
+++.|.|++|++|..+++.|.++++ ++..+.+....
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~ 40 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSA 40 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccC
Confidence 5789999999999999999999765 44666655433
No 323
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=97.46 E-value=0.0014 Score=35.29 Aligned_cols=43 Identities=30% Similarity=0.523 Sum_probs=36.0
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHh
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLL 48 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~ 48 (64)
+..+|||-+|.=|+.+++.|+..||+|..+.|.........++
T Consensus 29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIe 71 (376)
T KOG1372|consen 29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIE 71 (376)
T ss_pred eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhh
Confidence 5689999999999999999999999999999876665443333
No 324
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=97.43 E-value=0.0005 Score=38.25 Aligned_cols=35 Identities=23% Similarity=0.364 Sum_probs=31.6
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
.+++.|.|+.|.+|.+++..|.+.|++|.++++++
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 36788999999999999999999999999999864
No 325
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=97.42 E-value=0.0012 Score=34.96 Aligned_cols=60 Identities=15% Similarity=0.102 Sum_probs=45.4
Q ss_pred CCCeEEEEecC--cchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhhcCCCCceEEEEccC
Q 036468 3 GKGKVVCVTGA--SGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTLDGAEERLHLFKANS 64 (64)
Q Consensus 3 ~~~~~~~i~g~--~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Di 64 (64)
+++++.+|+|- .+.|+-.+++.+.++|.++...+.++ +.. +.++++.+.......++||+
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~-krv~~la~~~~s~~v~~cDV 65 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLE-KRVEELAEELGSDLVLPCDV 65 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHH-HHHHHHHhhccCCeEEecCC
Confidence 56899999986 46899999999999999999999876 333 56666654433445677875
No 326
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=97.41 E-value=0.00072 Score=35.09 Aligned_cols=33 Identities=18% Similarity=-0.023 Sum_probs=27.6
Q ss_pred EEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 9 CVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 9 ~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
+..+++|.+|..++++|.+.|++|++..|+..+
T Consensus 4 ~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~ 36 (211)
T COG2085 4 IAIIGTGNIGSALALRLAKAGHEVIIGSSRGPK 36 (211)
T ss_pred EEEeccChHHHHHHHHHHhCCCeEEEecCCChh
Confidence 345789999999999999999999998665443
No 327
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.35 E-value=0.00068 Score=36.69 Aligned_cols=35 Identities=17% Similarity=0.191 Sum_probs=30.4
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
+++.+.| .|.+|.+++..|+++|++|+++++++..
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~ 37 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAA 37 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHH
Confidence 3577777 8899999999999999999999998654
No 328
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.32 E-value=0.0016 Score=36.79 Aligned_cols=40 Identities=20% Similarity=0.159 Sum_probs=33.4
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
|...+++++++|.. +.|.+.++.|.+.|++|.+.+.++..
T Consensus 1 ~~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~ 40 (445)
T PRK04308 1 MTFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKP 40 (445)
T ss_pred CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCc
Confidence 55567789999975 79999999999999999999876543
No 329
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.31 E-value=0.0011 Score=36.56 Aligned_cols=35 Identities=26% Similarity=0.396 Sum_probs=28.8
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRS-YTVKATVRDL 39 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~ 39 (64)
+.++.|.|++|++|+.+++.+.++. .++..+.+++
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~ 38 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE 38 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence 4689999999999999999999875 4877774443
No 330
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.28 E-value=0.0018 Score=32.50 Aligned_cols=40 Identities=35% Similarity=0.364 Sum_probs=33.6
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
..+++++|.|++..+|..+++.|.+.|.+|++..|+.++.
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l 81 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNL 81 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhH
Confidence 4578999999977789999999999999999988875433
No 331
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=97.26 E-value=0.0012 Score=36.91 Aligned_cols=37 Identities=24% Similarity=0.409 Sum_probs=30.9
Q ss_pred CeEEEEecCcchHHHHHHHHHHHC-CCEEEEEEeCCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQR-SYTVKATVRDLNN 41 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~-~~~v~~~~r~~~~ 41 (64)
.+++.|.|++|++|..+++.|..+ ..++..+.++...
T Consensus 38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~sa 75 (381)
T PLN02968 38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKA 75 (381)
T ss_pred ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhc
Confidence 468999999999999999999998 5788887765433
No 332
>PRK06444 prephenate dehydrogenase; Provisional
Probab=97.26 E-value=0.00099 Score=34.24 Aligned_cols=28 Identities=18% Similarity=0.240 Sum_probs=25.0
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEE
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKA 34 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~ 34 (64)
++.+.|+.|.+|+.++..|.+.|+.|.+
T Consensus 2 ~~~iiG~~G~mG~~~~~~~~~~g~~v~~ 29 (197)
T PRK06444 2 MEIIIGKNGRLGRVLCSILDDNGLGVYI 29 (197)
T ss_pred EEEEEecCCcHHHHHHHHHHhCCCEEEE
Confidence 6788899999999999999999988753
No 333
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.25 E-value=0.0013 Score=33.84 Aligned_cols=36 Identities=22% Similarity=0.227 Sum_probs=30.3
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+++++++|.|+ |.+|...++.|++.|++|+++.+..
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 46788999877 7799999999999999999887543
No 334
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=97.24 E-value=0.0024 Score=31.05 Aligned_cols=37 Identities=24% Similarity=0.232 Sum_probs=31.7
Q ss_pred eEEEEecCcchHHHHHHHHHHHCC--CEEEEEEeCCCCc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRS--YTVKATVRDLNNH 42 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~--~~v~~~~r~~~~~ 42 (64)
+++.|.|++|.+|++++..+...+ .+++++|++++..
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~ 39 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKA 39 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccc
Confidence 468899999999999999999886 6899999986543
No 335
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=97.24 E-value=0.00073 Score=38.73 Aligned_cols=38 Identities=18% Similarity=0.150 Sum_probs=31.9
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
.+++++++|+ |++|++++..|.+.|++|++.+|+..+.
T Consensus 331 ~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~ 368 (477)
T PRK09310 331 NNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHA 368 (477)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4578899995 7999999999999999999888865443
No 336
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.19 E-value=0.0019 Score=34.87 Aligned_cols=38 Identities=18% Similarity=0.107 Sum_probs=32.3
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
..++++.|.|. |.+|+.+++.+...|++|++.+|++..
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~ 186 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSAD 186 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 35678889887 669999999999999999999997653
No 337
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=97.17 E-value=0.0025 Score=28.14 Aligned_cols=32 Identities=19% Similarity=-0.021 Sum_probs=19.9
Q ss_pred CeEEEEecCcchHHHH--HHHHHHHCCCEEEEEEe
Q 036468 5 GKVVCVTGASGFIASW--LVKLLLQRSYTVKATVR 37 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~--~~~~l~~~~~~v~~~~r 37 (64)
++++||+|++.+.|.+ ++..| ..|.+.+.+..
T Consensus 39 pK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~f 72 (78)
T PF12242_consen 39 PKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSF 72 (78)
T ss_dssp -SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE-
T ss_pred CceEEEEecCCcccHHHHHHHHh-cCCCCEEEEee
Confidence 3789999999999988 44444 55666665554
No 338
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.16 E-value=0.01 Score=32.53 Aligned_cols=40 Identities=13% Similarity=0.136 Sum_probs=33.2
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCC--EEEEEEeCCCCcc
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSY--TVKATVRDLNNHN 43 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~--~v~~~~r~~~~~~ 43 (64)
..++++.|.|+ |.+|.+++..++..+. ++.++|++.+...
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~ 45 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAE 45 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhH
Confidence 45678999998 9999999999988874 8999999776543
No 339
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.13 E-value=0.0064 Score=31.40 Aligned_cols=37 Identities=27% Similarity=0.419 Sum_probs=29.3
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
+++++++|.|+ |.+|..-++.|++.|.+|++++.+..
T Consensus 7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~ 43 (205)
T TIGR01470 7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE 43 (205)
T ss_pred cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence 35678888865 55888889999999999999876543
No 340
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=97.13 E-value=0.00096 Score=37.32 Aligned_cols=57 Identities=18% Similarity=0.236 Sum_probs=41.3
Q ss_pred eEEEEecCcchHHHHHHHHHHH----CCCEEEEEEeCCCCcchhHHhhhcC----CCCceEEEEcc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQ----RSYTVKATVRDLNNHNAEHLLTLDG----AEERLHLFKAN 63 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~----~~~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D 63 (64)
--++|-||+|+.|..+++++.+ .+..+-+..|++.+++. .++.... +.++..++.+|
T Consensus 6 yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~-vL~~~~~k~~~~ls~~~i~i~D 70 (423)
T KOG2733|consen 6 YDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQE-VLEKVGEKTGTDLSSSVILIAD 70 (423)
T ss_pred eeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHH-HHHHHhhccCCCcccceEEEec
Confidence 4578999999999999999998 57888999999988763 4444332 22333366666
No 341
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.12 E-value=0.0014 Score=30.22 Aligned_cols=37 Identities=32% Similarity=0.416 Sum_probs=29.8
Q ss_pred CCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 2 SGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 2 ~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
.++++++++.|+ |.+|..-++.|++.|.+|+++....
T Consensus 4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 356788999987 7799999999999999999988763
No 342
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=97.11 E-value=0.0031 Score=34.86 Aligned_cols=33 Identities=30% Similarity=0.443 Sum_probs=27.7
Q ss_pred eEEEEecCcchHHHHHHHHHHHC-CCEEEEEEeC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQR-SYTVKATVRD 38 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~-~~~v~~~~r~ 38 (64)
+++.|.|++|.+|..+++.+.++ +.++..+.++
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~ 36 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSR 36 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECc
Confidence 68999999999999999999987 5777666553
No 343
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=97.11 E-value=0.0048 Score=29.38 Aligned_cols=34 Identities=21% Similarity=0.315 Sum_probs=27.4
Q ss_pred eEEEEecCcchHHHHHHHHHHH-CCCEEEEE-EeCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQ-RSYTVKAT-VRDL 39 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~-~~~~v~~~-~r~~ 39 (64)
+++.+.|++|.+|+.+++.+.+ .+.++... ++++
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCC
Confidence 4789999999999999999998 56776554 4544
No 344
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.09 E-value=0.0013 Score=36.31 Aligned_cols=29 Identities=34% Similarity=0.557 Sum_probs=24.1
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSY 30 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~ 30 (64)
|+ ++.++.|+|++|++|..+++.|.+.++
T Consensus 1 m~-~~~~IaIvGATG~vG~eLlrlL~~~~h 29 (336)
T PRK05671 1 MS-QPLDIAVVGATGTVGEALVQILEERDF 29 (336)
T ss_pred CC-CCCEEEEEccCCHHHHHHHHHHhhCCC
Confidence 44 336799999999999999999997654
No 345
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.08 E-value=0.003 Score=34.38 Aligned_cols=37 Identities=27% Similarity=0.279 Sum_probs=32.9
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEE-eCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATV-RDL 39 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~-r~~ 39 (64)
..++++.+.|.++.+|..++..|+++|++|+++. |++
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~ 193 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR 193 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence 4678999999999999999999999999999984 554
No 346
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=97.06 E-value=0.0021 Score=34.42 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=28.6
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
++.|.|+ |.+|..++..|.+.|++|++++|++..
T Consensus 2 ~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~ 35 (304)
T PRK06522 2 KIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAH 35 (304)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHH
Confidence 5677775 889999999999999999999986543
No 347
>PRK04148 hypothetical protein; Provisional
Probab=97.06 E-value=0.0035 Score=30.49 Aligned_cols=35 Identities=14% Similarity=0.077 Sum_probs=28.0
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
+++++..|.. .|.+++..|.+.|++|+++|.++..
T Consensus 17 ~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~a 51 (134)
T PRK04148 17 NKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKA 51 (134)
T ss_pred CCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHH
Confidence 4567777665 5677888888999999999998864
No 348
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=97.03 E-value=0.002 Score=33.11 Aligned_cols=35 Identities=26% Similarity=0.246 Sum_probs=31.4
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC--CEEEEEEeC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS--YTVKATVRD 38 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~--~~v~~~~r~ 38 (64)
.++..+|.|++|..|..++++++.++ .+|+++.|.
T Consensus 17 q~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR 53 (238)
T KOG4039|consen 17 QNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRR 53 (238)
T ss_pred hccceEEEeccccccHHHHHHHHhcccceeEEEEEec
Confidence 46789999999999999999999987 699999986
No 349
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=96.99 E-value=0.0035 Score=33.58 Aligned_cols=36 Identities=31% Similarity=0.315 Sum_probs=31.6
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
+.+++|.|++|.+|.++++.+...|.+|+++.++++
T Consensus 163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~ 198 (332)
T cd08259 163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPE 198 (332)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHH
Confidence 457999999999999999999999999988887653
No 350
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.99 E-value=0.008 Score=29.41 Aligned_cols=37 Identities=32% Similarity=0.268 Sum_probs=33.2
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
.+++++.|.|.+.-+|..++..|.++|.+|.+..++.
T Consensus 26 ~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t 62 (140)
T cd05212 26 LDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT 62 (140)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC
Confidence 4678999999999999999999999999999987544
No 351
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.98 E-value=0.0052 Score=33.17 Aligned_cols=39 Identities=18% Similarity=0.042 Sum_probs=31.1
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCC-EEEEEEeCCCCcc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSY-TVKATVRDLNNHN 43 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~~~~~~ 43 (64)
..++++|.|+ |+.|++++..+...|. +|++++|+..+.+
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~ 165 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAA 165 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 3467888866 6699999999999995 8999999876543
No 352
>PRK05086 malate dehydrogenase; Provisional
Probab=96.97 E-value=0.0039 Score=34.07 Aligned_cols=35 Identities=26% Similarity=0.081 Sum_probs=28.0
Q ss_pred eEEEEecCcchHHHHHHHHHHH-C--CCEEEEEEeCCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQ-R--SYTVKATVRDLN 40 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~-~--~~~v~~~~r~~~ 40 (64)
|++.|.|++|++|.+++..+.. . ++.+.++++++.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~ 38 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV 38 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence 4788999999999999988854 2 367888888653
No 353
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.97 E-value=0.0061 Score=33.12 Aligned_cols=38 Identities=29% Similarity=0.292 Sum_probs=33.6
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
.++++++|.|+++-+|+.++..|.+.|.+|+++.+...
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~ 193 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK 193 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch
Confidence 46789999999999999999999999999998887543
No 354
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.96 E-value=0.0031 Score=33.88 Aligned_cols=36 Identities=19% Similarity=0.201 Sum_probs=29.8
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
+++.+.| .|.+|..++..++.+|++|++++++++..
T Consensus 5 ~kI~vIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~ 40 (292)
T PRK07530 5 KKVGVIG-AGQMGNGIAHVCALAGYDVLLNDVSADRL 40 (292)
T ss_pred CEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 4566665 58899999999999999999999986543
No 355
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=96.96 E-value=0.0025 Score=34.59 Aligned_cols=37 Identities=22% Similarity=0.259 Sum_probs=30.8
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
+.+++|.|++|++|...++.....|.+|+++++++++
T Consensus 152 g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~ 188 (338)
T cd08295 152 GETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEK 188 (338)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 4689999999999999988777889998887776543
No 356
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.95 E-value=0.0042 Score=33.61 Aligned_cols=37 Identities=24% Similarity=0.241 Sum_probs=32.4
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
.++++++|.|+++.+|+.++..|.+.|.+|+++.+..
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t 193 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT 193 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4678899999999999999999999999998887743
No 357
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.95 E-value=0.0094 Score=34.10 Aligned_cols=35 Identities=23% Similarity=0.154 Sum_probs=29.2
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
++++++|.|+ |++|.+.++.|.+.|++|+++++++
T Consensus 15 ~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~ 49 (480)
T PRK01438 15 QGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGD 49 (480)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3567888875 7799999999999999999998654
No 358
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.93 E-value=0.0041 Score=30.81 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=27.5
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
++-+.| .|.+|..+++.|+++|++|++++|++++.
T Consensus 3 ~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~ 37 (163)
T PF03446_consen 3 KIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKA 37 (163)
T ss_dssp EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHH
T ss_pred EEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhh
Confidence 454554 58899999999999999999999876543
No 359
>PLN00106 malate dehydrogenase
Probab=96.93 E-value=0.0057 Score=33.68 Aligned_cols=35 Identities=26% Similarity=0.124 Sum_probs=30.4
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCC--CEEEEEEeCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRS--YTVKATVRDL 39 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~--~~v~~~~r~~ 39 (64)
..++.|+|++|.+|.+++..++.++ .++.++|+++
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~ 54 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN 54 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC
Confidence 3579999999999999999998665 5899999877
No 360
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=96.93 E-value=0.0048 Score=34.11 Aligned_cols=36 Identities=22% Similarity=0.168 Sum_probs=28.9
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
+++.|. ++|.+|.+++..++++|++|.++.|+++..
T Consensus 2 ~kI~Vi-GaGswGTALA~~la~ng~~V~lw~r~~~~~ 37 (329)
T COG0240 2 MKIAVI-GAGSWGTALAKVLARNGHEVRLWGRDEEIV 37 (329)
T ss_pred ceEEEE-cCChHHHHHHHHHHhcCCeeEEEecCHHHH
Confidence 345565 456699999999999999999999986543
No 361
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.92 E-value=0.0083 Score=32.08 Aligned_cols=25 Identities=32% Similarity=0.647 Sum_probs=22.9
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSY 30 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~ 30 (64)
+++++||++|.+|+++.+.+..++.
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~ 26 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGF 26 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCC
Confidence 6899999999999999999998875
No 362
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=96.90 E-value=0.0037 Score=33.58 Aligned_cols=36 Identities=22% Similarity=0.316 Sum_probs=30.2
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
+.+++|.|++|++|...++.....|.+|++++++++
T Consensus 144 g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~ 179 (329)
T cd08294 144 GETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDD 179 (329)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 467999999999999988888888999988876543
No 363
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.89 E-value=0.0037 Score=32.17 Aligned_cols=33 Identities=18% Similarity=0.115 Sum_probs=28.1
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCC-EEEEEEeC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSY-TVKATVRD 38 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~ 38 (64)
..+++|.|+ |++|..++..|++.|. +++++|.+
T Consensus 21 ~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 467888866 6799999999999996 79999887
No 364
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.89 E-value=0.0043 Score=33.82 Aligned_cols=34 Identities=26% Similarity=0.270 Sum_probs=29.6
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCC--EEEEEEeCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSY--TVKATVRDL 39 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~--~v~~~~r~~ 39 (64)
+++.|.|++|.+|..++..++..|. +|+++++++
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~ 36 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK 36 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 4688999999999999999999874 599999854
No 365
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.89 E-value=0.0048 Score=33.74 Aligned_cols=38 Identities=26% Similarity=0.279 Sum_probs=33.6
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
..++++.+.|.++.+|+.++..|+++|++|+++.+...
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~ 194 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST 194 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence 46788999999999999999999999999999876543
No 366
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=96.87 E-value=0.0055 Score=33.40 Aligned_cols=46 Identities=28% Similarity=0.346 Sum_probs=35.4
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcchhHHhhh
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHNAEHLLTL 50 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~~~~~~~~ 50 (64)
...+.|.|++|-|++.+++++..++.....+.|+......+.+..+
T Consensus 167 qatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l 212 (351)
T COG5322 167 QATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLTLL 212 (351)
T ss_pred HCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhhhc
Confidence 3568899999999999999999999988888887554433333333
No 367
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.87 E-value=0.0027 Score=34.07 Aligned_cols=36 Identities=11% Similarity=0.171 Sum_probs=30.1
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcc
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHN 43 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~ 43 (64)
++.+.|+ |.+|..++..+++.|++|+++++++...+
T Consensus 3 ~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~ 38 (288)
T PRK09260 3 KLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLE 38 (288)
T ss_pred EEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHH
Confidence 4666666 88999999999999999999999876543
No 368
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.86 E-value=0.0091 Score=27.67 Aligned_cols=33 Identities=24% Similarity=0.255 Sum_probs=25.8
Q ss_pred EEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 8 VCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 8 ~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
++|.|. |.+|..+++.|.+.+.+|+++++++..
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~ 33 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPER 33 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHH
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHH
Confidence 345555 679999999999977799999987643
No 369
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.85 E-value=0.008 Score=32.64 Aligned_cols=36 Identities=19% Similarity=0.169 Sum_probs=30.0
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
+.+++.+. |.|.+|.+++..|.+.|++|.+++|++.
T Consensus 3 ~~m~I~ii-G~G~~G~~lA~~l~~~G~~V~~~~r~~~ 38 (308)
T PRK14619 3 QPKTIAIL-GAGAWGSTLAGLASANGHRVRVWSRRSG 38 (308)
T ss_pred CCCEEEEE-CccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 34567666 5677999999999999999999998764
No 370
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=96.85 E-value=0.0047 Score=34.16 Aligned_cols=35 Identities=26% Similarity=0.367 Sum_probs=29.1
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCC-EEEEEEeCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSY-TVKATVRDL 39 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~~ 39 (64)
...+|+|.|+ |++|..++..|+..|. ++.++|.+.
T Consensus 23 ~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 23 REKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 3467888866 7899999999999995 899999863
No 371
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.83 E-value=0.0056 Score=32.38 Aligned_cols=34 Identities=24% Similarity=0.127 Sum_probs=28.3
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS-YTVKATVRD 38 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~ 38 (64)
+..+++|.|+ |++|..+++.|+..| .++.++|.+
T Consensus 31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 3567888877 889999999999999 578888765
No 372
>PTZ00325 malate dehydrogenase; Provisional
Probab=96.80 E-value=0.0065 Score=33.46 Aligned_cols=35 Identities=31% Similarity=0.104 Sum_probs=29.6
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC--CEEEEEEeC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS--YTVKATVRD 38 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~--~~v~~~~r~ 38 (64)
+++++.|+|++|.+|..++..++..+ .++.++|++
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~ 43 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV 43 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC
Confidence 45689999999999999999888554 689999983
No 373
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=96.80 E-value=0.0036 Score=33.76 Aligned_cols=36 Identities=19% Similarity=0.239 Sum_probs=29.9
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
+.+++|.|++|++|...++.....|.+|++++++++
T Consensus 139 g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~ 174 (325)
T TIGR02825 139 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDE 174 (325)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 467999999999999988877778999888876543
No 374
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=96.78 E-value=0.0057 Score=33.09 Aligned_cols=35 Identities=23% Similarity=0.239 Sum_probs=29.1
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
+++.+.| .|.+|..++..|++.|++|.+++|++..
T Consensus 2 mkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~~ 36 (325)
T PRK00094 2 MKIAVLG-AGSWGTALAIVLARNGHDVTLWARDPEQ 36 (325)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 3566776 5889999999999999999999987643
No 375
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=96.77 E-value=0.0072 Score=31.98 Aligned_cols=35 Identities=20% Similarity=0.193 Sum_probs=30.8
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+.+++|+|+++.+|..+++.+...|.+|++++++.
T Consensus 140 ~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~ 174 (323)
T cd05276 140 GETVLIHGGASGVGTAAIQLAKALGARVIATAGSE 174 (323)
T ss_pred CCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCH
Confidence 46799999999999999999999999998887754
No 376
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.77 E-value=0.0081 Score=32.64 Aligned_cols=37 Identities=24% Similarity=0.201 Sum_probs=31.9
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
.+++++|.|. |.+|+.++..+...|.+|++++|++..
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~ 187 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH 187 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 4678999986 679999999999999999999998643
No 377
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.77 E-value=0.013 Score=29.50 Aligned_cols=37 Identities=22% Similarity=0.180 Sum_probs=30.7
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
.++++.|. |.|.||+++++.+...|.+|+.+++...+
T Consensus 35 ~g~tvgIi-G~G~IG~~vA~~l~~fG~~V~~~d~~~~~ 71 (178)
T PF02826_consen 35 RGKTVGII-GYGRIGRAVARRLKAFGMRVIGYDRSPKP 71 (178)
T ss_dssp TTSEEEEE-STSHHHHHHHHHHHHTT-EEEEEESSCHH
T ss_pred CCCEEEEE-EEcCCcCeEeeeeecCCceeEEecccCCh
Confidence 46777777 55889999999999999999999998764
No 378
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.77 E-value=0.0056 Score=33.87 Aligned_cols=35 Identities=23% Similarity=0.325 Sum_probs=29.1
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCC-EEEEEEeCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSY-TVKATVRDL 39 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~~ 39 (64)
+..+|+|.|+ |++|..+++.|++.|. ++.++|++.
T Consensus 23 ~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 3567888875 6799999999999995 889888864
No 379
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=96.76 E-value=0.013 Score=26.10 Aligned_cols=33 Identities=39% Similarity=0.449 Sum_probs=28.3
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHC-CCEEEEEEe
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQR-SYTVKATVR 37 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~-~~~v~~~~r 37 (64)
..+++.+.|. |.+|..++..+.+. +.++.+++|
T Consensus 22 ~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 22 KGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 4578889888 99999999999998 578888877
No 380
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.74 E-value=0.0068 Score=32.95 Aligned_cols=36 Identities=17% Similarity=0.185 Sum_probs=30.3
Q ss_pred EEEEecCcchHHHHHHHHHHHCC--CEEEEEEeCCCCcc
Q 036468 7 VVCVTGASGFIASWLVKLLLQRS--YTVKATVRDLNNHN 43 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~--~~v~~~~r~~~~~~ 43 (64)
++.|.|+ |++|.+++..++..| +++++++++++...
T Consensus 2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~ 39 (306)
T cd05291 2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAE 39 (306)
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhh
Confidence 5777885 899999999999988 68999999877654
No 381
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.73 E-value=0.0052 Score=32.90 Aligned_cols=34 Identities=24% Similarity=0.160 Sum_probs=28.5
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
++.|.| .|.+|.+++..|.+.|++|.++++++..
T Consensus 2 ~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~ 35 (279)
T PRK07417 2 KIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRREST 35 (279)
T ss_pred eEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 455665 7889999999999999999999987644
No 382
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=96.72 E-value=0.0078 Score=31.91 Aligned_cols=35 Identities=31% Similarity=0.293 Sum_probs=30.8
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+.+++|+|+++.+|..+++.+...|.+|++.+++.
T Consensus 145 g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~ 179 (325)
T cd08253 145 GETVLVHGGSGAVGHAAVQLARWAGARVIATASSA 179 (325)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 56899999999999999999988899998887754
No 383
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.71 E-value=0.0041 Score=33.62 Aligned_cols=38 Identities=18% Similarity=0.165 Sum_probs=30.7
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCC-EEEEEEeCCCCc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSY-TVKATVRDLNNH 42 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~~~~~ 42 (64)
++++++|.|+ ||.+++++-.|++.|. +++++.|++++.
T Consensus 126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka 164 (283)
T PRK14027 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRA 164 (283)
T ss_pred CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHH
Confidence 3567888876 7799999999999985 789999876554
No 384
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.70 E-value=0.0066 Score=33.14 Aligned_cols=36 Identities=22% Similarity=0.182 Sum_probs=29.6
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
.+++.+. |.|.+|..++..|++.|++|.+++|+++.
T Consensus 4 ~m~I~iI-G~G~mG~~ia~~L~~~G~~V~~~~r~~~~ 39 (328)
T PRK14618 4 GMRVAVL-GAGAWGTALAVLAASKGVPVRLWARRPEF 39 (328)
T ss_pred CCeEEEE-CcCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 3456666 56789999999999999999999997654
No 385
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=96.69 E-value=0.0054 Score=34.73 Aligned_cols=36 Identities=14% Similarity=0.110 Sum_probs=30.1
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
+++.+. |.|++|..++..|++.|++|+++++++...
T Consensus 4 ~kI~VI-GlG~~G~~~A~~La~~G~~V~~~D~~~~~v 39 (415)
T PRK11064 4 ETISVI-GLGYIGLPTAAAFASRQKQVIGVDINQHAV 39 (415)
T ss_pred cEEEEE-CcchhhHHHHHHHHhCCCEEEEEeCCHHHH
Confidence 456666 569999999999999999999999876543
No 386
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=96.69 E-value=0.0045 Score=33.55 Aligned_cols=35 Identities=17% Similarity=0.101 Sum_probs=29.4
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCC-EEEEEEeCCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSY-TVKATVRDLN 40 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~~~ 40 (64)
.+++|.|++|++|...++.....|. +|++++++++
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~ 191 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDE 191 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHH
Confidence 6899999999999998887777797 7988877554
No 387
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.69 E-value=0.0075 Score=32.42 Aligned_cols=36 Identities=19% Similarity=0.139 Sum_probs=30.0
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
+++.|.| .|.+|..++..++..|++|++++++++..
T Consensus 4 ~kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l 39 (287)
T PRK08293 4 KNVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISDEAL 39 (287)
T ss_pred cEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHHH
Confidence 4566775 58899999999999999999999887543
No 388
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=96.69 E-value=0.0044 Score=31.49 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=24.8
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
++-|. |.|++|..++..|++.|++|+.++.++.
T Consensus 2 ~I~Vi-GlGyvGl~~A~~lA~~G~~V~g~D~~~~ 34 (185)
T PF03721_consen 2 KIAVI-GLGYVGLPLAAALAEKGHQVIGVDIDEE 34 (185)
T ss_dssp EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HH
T ss_pred EEEEE-CCCcchHHHHHHHHhCCCEEEEEeCChH
Confidence 44444 8899999999999999999999998754
No 389
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=96.67 E-value=0.006 Score=32.85 Aligned_cols=36 Identities=22% Similarity=0.120 Sum_probs=29.6
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
+++-+. +.|.+|..++..|+..|++|++.+++++..
T Consensus 5 ~~V~vI-G~G~mG~~iA~~l~~~G~~V~~~d~~~~~~ 40 (295)
T PLN02545 5 KKVGVV-GAGQMGSGIAQLAAAAGMDVWLLDSDPAAL 40 (295)
T ss_pred CEEEEE-CCCHHHHHHHHHHHhcCCeEEEEeCCHHHH
Confidence 446566 458899999999999999999999887654
No 390
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.67 E-value=0.0046 Score=33.29 Aligned_cols=38 Identities=21% Similarity=0.100 Sum_probs=30.9
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCC-EEEEEEeCCCCc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSY-TVKATVRDLNNH 42 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~~~~~ 42 (64)
.+++++|.|+ |+.+++++..|...|. +|+++.|++++.
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka 162 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKL 162 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence 4567888865 7799999999999995 799999987654
No 391
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=96.66 E-value=0.0047 Score=33.91 Aligned_cols=36 Identities=22% Similarity=0.240 Sum_probs=29.9
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
+.+++|.|++|++|...++.....|.+|++++++++
T Consensus 159 g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~ 194 (348)
T PLN03154 159 GDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 194 (348)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHH
Confidence 467999999999999988877778999888776543
No 392
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=96.66 E-value=0.013 Score=31.68 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=29.9
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
+++.|. |.|.+|.++++.+.+.|+.+.+++++....
T Consensus 4 ~~v~Iv-G~GliG~s~a~~l~~~g~~v~i~g~d~~~~ 39 (279)
T COG0287 4 MKVGIV-GLGLMGGSLARALKEAGLVVRIIGRDRSAA 39 (279)
T ss_pred cEEEEE-CCchHHHHHHHHHHHcCCeEEEEeecCcHH
Confidence 455554 599999999999999999999988877654
No 393
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.65 E-value=0.014 Score=29.26 Aligned_cols=39 Identities=33% Similarity=0.365 Sum_probs=30.2
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
..++++++.|.+.-+|+-++..|.+++..|.+......+
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~ 72 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKN 72 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSS
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCc
Confidence 467899999999999999999999999999987665433
No 394
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=96.63 E-value=0.014 Score=32.53 Aligned_cols=34 Identities=29% Similarity=0.348 Sum_probs=26.6
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEe
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS-YTVKATVR 37 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r 37 (64)
.++++|+.|++|++|++.++.....+ ..|+..+.
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s 191 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACS 191 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcc
Confidence 45789999999999999888777778 45555443
No 395
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=96.59 E-value=0.0051 Score=33.76 Aligned_cols=35 Identities=34% Similarity=0.331 Sum_probs=27.3
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+.+++|+|++|++|...++.....|+.+++...+.
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~ 177 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSS 177 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH
Confidence 46899999999999998888888886655554433
No 396
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=96.59 E-value=0.0076 Score=35.01 Aligned_cols=37 Identities=22% Similarity=0.169 Sum_probs=31.3
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHN 43 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~ 43 (64)
+++-+.|+ |.+|..++..++..|++|++.+++++...
T Consensus 8 ~~V~VIGa-G~MG~gIA~~la~aG~~V~l~D~~~e~l~ 44 (507)
T PRK08268 8 ATVAVIGA-GAMGAGIAQVAAQAGHTVLLYDARAGAAA 44 (507)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHH
Confidence 56767766 88999999999999999999999876543
No 397
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=96.57 E-value=0.013 Score=32.53 Aligned_cols=27 Identities=22% Similarity=0.549 Sum_probs=23.8
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSY 30 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~ 30 (64)
+..++.|.|++|++|..+++.|.++++
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~h 32 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDF 32 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCC
Confidence 457899999999999999999998665
No 398
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.56 E-value=0.009 Score=29.66 Aligned_cols=33 Identities=27% Similarity=0.177 Sum_probs=27.3
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEE
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATV 36 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~ 36 (64)
+++++++|.|+ |.+|...++.|++.|++|++++
T Consensus 11 l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs 43 (157)
T PRK06719 11 LHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS 43 (157)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence 45778888765 5599999999999999999884
No 399
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.55 E-value=0.012 Score=32.44 Aligned_cols=33 Identities=24% Similarity=0.164 Sum_probs=28.0
Q ss_pred EEEEecCcchHHHHHHHHHHHCC-------CEEEEEEeCC
Q 036468 7 VVCVTGASGFIASWLVKLLLQRS-------YTVKATVRDL 39 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~-------~~v~~~~r~~ 39 (64)
++.|+|++|.+|.+++..++..+ ++++++|+++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~ 41 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPP 41 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCC
Confidence 57899999999999999888765 2589999876
No 400
>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.55 E-value=0.03 Score=32.33 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=29.0
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
.++++.+.| -|+.|.++++.|.+.|++|.+.|.+..
T Consensus 6 ~~~~i~v~G-~G~sG~s~a~~L~~~G~~v~~~D~~~~ 41 (498)
T PRK02006 6 QGPMVLVLG-LGESGLAMARWCARHGARLRVADTREA 41 (498)
T ss_pred CCCEEEEEe-ecHhHHHHHHHHHHCCCEEEEEcCCCC
Confidence 456788877 556889999999999999999987553
No 401
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.54 E-value=0.011 Score=28.59 Aligned_cols=30 Identities=20% Similarity=0.147 Sum_probs=25.2
Q ss_pred EEEecCcchHHHHHHHHHHHCCC-EEEEEEeC
Q 036468 8 VCVTGASGFIASWLVKLLLQRSY-TVKATVRD 38 (64)
Q Consensus 8 ~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~ 38 (64)
+++.|+ |++|..+++.|+..|. ++.++|.+
T Consensus 2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 567765 8899999999999995 78888765
No 402
>PRK05442 malate dehydrogenase; Provisional
Probab=96.53 E-value=0.017 Score=31.90 Aligned_cols=37 Identities=22% Similarity=0.072 Sum_probs=30.8
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC--C-----EEEEEEeCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS--Y-----TVKATVRDLN 40 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~--~-----~v~~~~r~~~ 40 (64)
++.++.|.|++|.+|.+++..++..+ . +++++|.+++
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~ 46 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPA 46 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCc
Confidence 56789999999999999999888765 3 7899998654
No 403
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.49 E-value=0.019 Score=31.69 Aligned_cols=36 Identities=22% Similarity=0.083 Sum_probs=30.4
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCC--C-----EEEEEEeCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRS--Y-----TVKATVRDLN 40 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~--~-----~v~~~~r~~~ 40 (64)
+.++.|.|++|.+|.+++..++..+ . +++++|.+.+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~ 44 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQA 44 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCc
Confidence 5689999999999999999998876 3 7999998544
No 404
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.49 E-value=0.016 Score=31.44 Aligned_cols=36 Identities=14% Similarity=0.157 Sum_probs=29.2
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
+++.+.| .|.+|..++..|++.|++|+++++++...
T Consensus 5 ~~I~vIG-aG~mG~~iA~~l~~~g~~V~~~d~~~~~~ 40 (311)
T PRK06130 5 QNLAIIG-AGTMGSGIAALFARKGLQVVLIDVMEGAL 40 (311)
T ss_pred cEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence 4566664 58899999999999999999999876543
No 405
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=96.49 E-value=0.014 Score=31.27 Aligned_cols=35 Identities=29% Similarity=0.206 Sum_probs=30.8
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+.+++|+|+++.+|..+++.+...|.+|+++++++
T Consensus 167 ~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~ 201 (342)
T cd08266 167 GETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSE 201 (342)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 46799999999999999999999999998887754
No 406
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=96.49 E-value=0.0082 Score=31.92 Aligned_cols=35 Identities=29% Similarity=0.239 Sum_probs=30.7
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+.+++|+|+++.+|..++..+...|.++++.+++.
T Consensus 145 ~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~ 179 (328)
T cd08268 145 GDSVLITAASSSVGLAAIQIANAAGATVIATTRTS 179 (328)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCH
Confidence 45789999999999999999999999998887754
No 407
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=96.48 E-value=0.011 Score=32.73 Aligned_cols=30 Identities=30% Similarity=0.474 Sum_probs=25.1
Q ss_pred eEEEEecCcchHHHHHHHHHHHC-CCEEEEE
Q 036468 6 KVVCVTGASGFIASWLVKLLLQR-SYTVKAT 35 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~-~~~v~~~ 35 (64)
+++.|.|++|++|..+++.|.++ ..++..+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l 31 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYL 31 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEE
Confidence 36889999999999999999987 5677743
No 408
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.48 E-value=0.011 Score=32.25 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=27.4
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
++.|.|+ |.+|.+++..|.+.|++|.+++|++.
T Consensus 2 kI~IiGa-Ga~G~ala~~L~~~g~~V~l~~r~~~ 34 (326)
T PRK14620 2 KISILGA-GSFGTAIAIALSSKKISVNLWGRNHT 34 (326)
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCeEEEEecCHH
Confidence 4666655 77999999999999999999998653
No 409
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.47 E-value=0.011 Score=32.14 Aligned_cols=38 Identities=24% Similarity=0.212 Sum_probs=31.0
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeCCCCcc
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRS-YTVKATVRDLNNHN 43 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~~~~~ 43 (64)
+++++|.|+ ||.+++++..|++.| .+|+++.|+.++.+
T Consensus 126 ~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~ 164 (283)
T COG0169 126 GKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAE 164 (283)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 467778755 558999999999999 68999999887654
No 410
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.47 E-value=0.011 Score=31.78 Aligned_cols=36 Identities=22% Similarity=0.316 Sum_probs=29.7
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
+++.|.| .|.+|..++..++..|++|+++++++...
T Consensus 4 ~~I~ViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l 39 (291)
T PRK06035 4 KVIGVVG-SGVMGQGIAQVFARTGYDVTIVDVSEEIL 39 (291)
T ss_pred cEEEEEC-ccHHHHHHHHHHHhcCCeEEEEeCCHHHH
Confidence 4566664 58899999999999999999999887654
No 411
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.46 E-value=0.0087 Score=33.94 Aligned_cols=37 Identities=27% Similarity=0.377 Sum_probs=31.5
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeCCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS-YTVKATVRDLNN 41 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~~~ 41 (64)
.+++++|.|+ |.+|..+++.|...| .+|++++|++.+
T Consensus 179 ~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~r 216 (417)
T TIGR01035 179 KGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYER 216 (417)
T ss_pred cCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHH
Confidence 4578889886 999999999999998 789999997654
No 412
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=96.45 E-value=0.01 Score=29.29 Aligned_cols=33 Identities=24% Similarity=0.220 Sum_probs=27.1
Q ss_pred EEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 8 VCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 8 ~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
+.|. |+|.+|.+++..++.+|++|.++.|+++.
T Consensus 2 I~Vi-GaG~~G~AlA~~la~~g~~V~l~~~~~~~ 34 (157)
T PF01210_consen 2 IAVI-GAGNWGTALAALLADNGHEVTLWGRDEEQ 34 (157)
T ss_dssp EEEE-SSSHHHHHHHHHHHHCTEEEEEETSCHHH
T ss_pred EEEE-CcCHHHHHHHHHHHHcCCEEEEEeccHHH
Confidence 4455 55668999999999999999999997643
No 413
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.44 E-value=0.013 Score=30.18 Aligned_cols=34 Identities=21% Similarity=0.123 Sum_probs=28.0
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCC-EEEEEEeC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSY-TVKATVRD 38 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~ 38 (64)
...+++|.| .|++|..+++.|+..|. ++.++|.+
T Consensus 20 ~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 345677775 67799999999999995 89998876
No 414
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=96.43 E-value=0.0067 Score=33.56 Aligned_cols=26 Identities=27% Similarity=0.597 Sum_probs=22.3
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEE
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTV 32 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v 32 (64)
++.|.|++|++|..+++.|.++++.+
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~ 26 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPI 26 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCCh
Confidence 36789999999999999999877653
No 415
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=96.41 E-value=0.011 Score=34.26 Aligned_cols=36 Identities=11% Similarity=0.020 Sum_probs=29.8
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
+++-+. |.|.+|..++..|++.|++|++++++++..
T Consensus 5 ~kIavI-G~G~MG~~iA~~la~~G~~V~v~D~~~~~~ 40 (495)
T PRK07531 5 MKAACI-GGGVIGGGWAARFLLAGIDVAVFDPHPEAE 40 (495)
T ss_pred CEEEEE-CcCHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence 345455 678899999999999999999999987654
No 416
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.40 E-value=0.011 Score=30.32 Aligned_cols=33 Identities=15% Similarity=0.187 Sum_probs=26.8
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRS-YTVKATVRD 38 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~ 38 (64)
..+++|.|+.| +|.++++.|+..| .+++++|.+
T Consensus 19 ~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 19 SAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred hCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence 45788876665 9999999999999 568888865
No 417
>PLN02256 arogenate dehydrogenase
Probab=96.40 E-value=0.021 Score=31.22 Aligned_cols=34 Identities=26% Similarity=0.313 Sum_probs=29.0
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
.+++.+.| .|.+|.+++..+.+.|++|+++++++
T Consensus 36 ~~kI~IIG-~G~mG~slA~~L~~~G~~V~~~d~~~ 69 (304)
T PLN02256 36 KLKIGIVG-FGNFGQFLAKTFVKQGHTVLATSRSD 69 (304)
T ss_pred CCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECcc
Confidence 45677777 69999999999999999999988875
No 418
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.39 E-value=0.015 Score=32.12 Aligned_cols=36 Identities=28% Similarity=0.186 Sum_probs=29.8
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
+++-|.| +|-+|..++..|+..|++|.+++++++..
T Consensus 8 ~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~ 43 (321)
T PRK07066 8 KTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAE 43 (321)
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence 4566664 58899999999999999999999987643
No 419
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.39 E-value=0.02 Score=31.68 Aligned_cols=36 Identities=17% Similarity=0.134 Sum_probs=30.1
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
.++++.|.|- |.||+.+++.+...|.+|.++++.+.
T Consensus 149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~ 184 (333)
T PRK13243 149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK 184 (333)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 4567777765 88999999999999999999888654
No 420
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.38 E-value=0.018 Score=31.67 Aligned_cols=33 Identities=27% Similarity=0.081 Sum_probs=28.7
Q ss_pred eEEEEecCcchHHHHHHHHHHHCC--CEEEEEEeC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRS--YTVKATVRD 38 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~--~~v~~~~r~ 38 (64)
+++.|.|++|.+|.+++..++..+ .+++++|.+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~ 35 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV 35 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC
Confidence 367889999999999999998877 589999987
No 421
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.37 E-value=0.011 Score=31.64 Aligned_cols=35 Identities=14% Similarity=0.130 Sum_probs=29.0
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
++.|.| .|.+|..++..++..|++|++++++++..
T Consensus 5 kI~VIG-~G~mG~~ia~~la~~g~~V~~~d~~~~~~ 39 (282)
T PRK05808 5 KIGVIG-AGTMGNGIAQVCAVAGYDVVMVDISDAAV 39 (282)
T ss_pred EEEEEc-cCHHHHHHHHHHHHCCCceEEEeCCHHHH
Confidence 455664 58999999999999999999999877654
No 422
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.37 E-value=0.012 Score=33.81 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=29.7
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
.++++++.| .|+.|.++++.|.+.|++|.+.+++..
T Consensus 14 ~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~ 49 (473)
T PRK00141 14 LSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNET 49 (473)
T ss_pred cCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChH
Confidence 356788876 677999999999999999999887543
No 423
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.37 E-value=0.017 Score=33.81 Aligned_cols=35 Identities=14% Similarity=0.068 Sum_probs=28.4
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
.++|. +.|.+|+.+++.|.++|+++++++.+++..
T Consensus 419 hiiI~-G~G~~G~~la~~L~~~g~~vvvId~d~~~~ 453 (558)
T PRK10669 419 HALLV-GYGRVGSLLGEKLLAAGIPLVVIETSRTRV 453 (558)
T ss_pred CEEEE-CCChHHHHHHHHHHHCCCCEEEEECCHHHH
Confidence 45555 556699999999999999999999877543
No 424
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=96.36 E-value=0.01 Score=29.75 Aligned_cols=29 Identities=24% Similarity=0.229 Sum_probs=26.9
Q ss_pred EEEecCcchHHHHHHHHHHHCCCEEEEEE
Q 036468 8 VCVTGASGFIASWLVKLLLQRSYTVKATV 36 (64)
Q Consensus 8 ~~i~g~~~~ig~~~~~~l~~~~~~v~~~~ 36 (64)
|+++|+++-+|++++.+|.++|.+|....
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~~ 29 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVMLS 29 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEec
Confidence 57899999999999999999999999984
No 425
>PRK06223 malate dehydrogenase; Reviewed
Probab=96.35 E-value=0.02 Score=31.03 Aligned_cols=36 Identities=22% Similarity=0.170 Sum_probs=30.3
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCC-EEEEEEeCCCCc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSY-TVKATVRDLNNH 42 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~~~~~ 42 (64)
+++.|.|+ |.+|..++..++..+. +|++.|++++..
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~ 39 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVP 39 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchh
Confidence 57888898 9999999999998764 899999977654
No 426
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=96.34 E-value=0.019 Score=32.88 Aligned_cols=37 Identities=30% Similarity=0.170 Sum_probs=31.8
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
.+++++|.|. |.+|+.++..+...|.+|+++++++.+
T Consensus 211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~r 247 (425)
T PRK05476 211 AGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPIC 247 (425)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchh
Confidence 4678888875 789999999999999999999987754
No 427
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=96.34 E-value=0.015 Score=31.86 Aligned_cols=33 Identities=24% Similarity=0.270 Sum_probs=27.7
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+++.+. |.|.+|..++..|++.|++|.+++|++
T Consensus 3 mkI~Ii-G~G~mG~~~A~~L~~~G~~V~~~~r~~ 35 (341)
T PRK08229 3 ARICVL-GAGSIGCYLGGRLAAAGADVTLIGRAR 35 (341)
T ss_pred ceEEEE-CCCHHHHHHHHHHHhcCCcEEEEecHH
Confidence 456565 678899999999999999999999854
No 428
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.32 E-value=0.02 Score=30.05 Aligned_cols=35 Identities=17% Similarity=0.204 Sum_probs=29.5
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCC---EEEEEEeC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSY---TVKATVRD 38 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~---~v~~~~r~ 38 (64)
.+.+++++.|+ |+.|..++..+.+.|. ++++++|+
T Consensus 23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 34568888877 7899999999999885 69999998
No 429
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.32 E-value=0.033 Score=30.27 Aligned_cols=36 Identities=22% Similarity=0.135 Sum_probs=29.0
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS-YTVKATVRDLN 40 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~~ 40 (64)
.+++++|.|+ |+.+++++-.++..| .+|+++.|++.
T Consensus 123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~ 159 (288)
T PRK12749 123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDE 159 (288)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 4567889886 556899999998888 48999999864
No 430
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=96.31 E-value=0.011 Score=34.45 Aligned_cols=37 Identities=16% Similarity=0.090 Sum_probs=31.1
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCcc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNHN 43 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~~ 43 (64)
+++-+.|+ |.+|..++..++..|++|++++++++...
T Consensus 6 ~kV~VIGa-G~MG~gIA~~la~aG~~V~l~d~~~e~l~ 42 (503)
T TIGR02279 6 VTVAVIGA-GAMGAGIAQVAASAGHQVLLYDIRAEALA 42 (503)
T ss_pred cEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHH
Confidence 45667765 88999999999999999999999876653
No 431
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.30 E-value=0.017 Score=30.22 Aligned_cols=33 Identities=21% Similarity=0.128 Sum_probs=26.4
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRS-YTVKATVRD 38 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~ 38 (64)
..+++|.| .|++|.++++.|+..| .+++++|.+
T Consensus 21 ~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D 54 (228)
T cd00757 21 NARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDD 54 (228)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45677775 6779999999999999 477777654
No 432
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.29 E-value=0.0097 Score=33.84 Aligned_cols=38 Identities=18% Similarity=0.244 Sum_probs=31.6
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeCCCCc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS-YTVKATVRDLNNH 42 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~~~~ 42 (64)
.++++++.|+ |++|..++..|...| .+++++.|+..+.
T Consensus 180 ~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra 218 (414)
T PRK13940 180 SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKA 218 (414)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 4678889877 889999999999998 5799999986543
No 433
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=96.28 E-value=0.022 Score=30.29 Aligned_cols=35 Identities=20% Similarity=0.153 Sum_probs=30.3
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+.+++|+|+++.+|..+++.+...|.+|+++.+++
T Consensus 140 ~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~ 174 (325)
T TIGR02824 140 GETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSD 174 (325)
T ss_pred CCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 46789999999999999888888899998887654
No 434
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.28 E-value=0.033 Score=30.38 Aligned_cols=39 Identities=28% Similarity=0.201 Sum_probs=33.6
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
..+++++|.|.+.-+|+-++..|.+++.+|+++.+...+
T Consensus 157 l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~ 195 (285)
T PRK10792 157 TYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKN 195 (285)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCC
Confidence 457899999999999999999999999999988765433
No 435
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.28 E-value=0.0085 Score=32.25 Aligned_cols=36 Identities=19% Similarity=0.236 Sum_probs=29.6
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCC-EEEEEEeCCCCc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSY-TVKATVRDLNNH 42 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~~~~~ 42 (64)
+++++.|+ ||.+++++-.|.+.|. +|+++.|++++.
T Consensus 123 ~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a 159 (272)
T PRK12550 123 LVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTG 159 (272)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHH
Confidence 46778775 7899999999999985 699999987654
No 436
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=96.26 E-value=0.018 Score=30.97 Aligned_cols=37 Identities=32% Similarity=0.380 Sum_probs=30.9
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
+.+++|.|++|.+|..+++.....|.+|+++++++++
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~ 183 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADA 183 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHH
Confidence 3589999999999999988888889999888776543
No 437
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=96.25 E-value=0.0076 Score=33.13 Aligned_cols=30 Identities=23% Similarity=0.289 Sum_probs=26.1
Q ss_pred CcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 13 ASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 13 ~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
+-|-+|..++..|++.||+|++++|+.++.
T Consensus 42 GLG~MG~~M~~nLik~G~kVtV~dr~~~k~ 71 (327)
T KOG0409|consen 42 GLGNMGSAMVSNLIKAGYKVTVYDRTKDKC 71 (327)
T ss_pred eeccchHHHHHHHHHcCCEEEEEeCcHHHH
Confidence 567789999999999999999999976554
No 438
>PTZ00117 malate dehydrogenase; Provisional
Probab=96.25 E-value=0.031 Score=30.73 Aligned_cols=38 Identities=29% Similarity=0.194 Sum_probs=31.4
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeCCCCc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS-YTVKATVRDLNNH 42 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~~~~ 42 (64)
+.+++.|.|+ |.+|..++..++..+ .++.++|++++..
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~ 42 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVP 42 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccc
Confidence 3567889996 999999999888888 7899999877654
No 439
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.25 E-value=0.021 Score=30.97 Aligned_cols=35 Identities=20% Similarity=0.299 Sum_probs=28.7
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCC--EEEEEEeCCCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSY--TVKATVRDLNN 41 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~--~v~~~~r~~~~ 41 (64)
+++.|.| .|.+|.+++..|.+.|+ +|+++++++..
T Consensus 7 ~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~ 43 (307)
T PRK07502 7 DRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAET 43 (307)
T ss_pred cEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHH
Confidence 5677776 88999999999999884 88988887643
No 440
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=96.22 E-value=0.024 Score=31.36 Aligned_cols=31 Identities=32% Similarity=0.539 Sum_probs=26.0
Q ss_pred EEEEecCcchHHHHHHHHHHHCC-CEEEEEEe
Q 036468 7 VVCVTGASGFIASWLVKLLLQRS-YTVKATVR 37 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r 37 (64)
++.|+|++|++|..+++.+.++. .++..+..
T Consensus 2 kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~ 33 (341)
T TIGR00978 2 RVAVLGATGLVGQKFVKLLAKHPYFELAKVVA 33 (341)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCceEEEEEE
Confidence 68899999999999999988876 57776644
No 441
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=96.22 E-value=0.041 Score=28.16 Aligned_cols=27 Identities=19% Similarity=0.107 Sum_probs=21.0
Q ss_pred cCcchHHHHHHHHHHHCCCEEEEEEeC
Q 036468 12 GASGFIASWLVKLLLQRSYTVKATVRD 38 (64)
Q Consensus 12 g~~~~ig~~~~~~l~~~~~~v~~~~r~ 38 (64)
.++|.+|.++++.+..+|++|+++..+
T Consensus 26 ~SSG~~G~~lA~~~~~~Ga~V~li~g~ 52 (185)
T PF04127_consen 26 RSSGKMGAALAEEAARRGAEVTLIHGP 52 (185)
T ss_dssp S--SHHHHHHHHHHHHTT-EEEEEE-T
T ss_pred CCcCHHHHHHHHHHHHCCCEEEEEecC
Confidence 446789999999999999999988765
No 442
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.20 E-value=0.02 Score=30.82 Aligned_cols=35 Identities=23% Similarity=0.280 Sum_probs=28.6
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
+++-+.| .|.+|..++..+++.|++|.+++|++.+
T Consensus 3 ~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~ 37 (296)
T PRK11559 3 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEA 37 (296)
T ss_pred ceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence 3566665 6889999999999999999999887644
No 443
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.20 E-value=0.021 Score=29.70 Aligned_cols=33 Identities=21% Similarity=0.196 Sum_probs=27.3
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCC-EEEEEEeC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSY-TVKATVRD 38 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~ 38 (64)
..+++|.| .|++|..+++.|++.|. ++.++|.+
T Consensus 28 ~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 28 KAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred CCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45677876 57899999999999995 68888876
No 444
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=96.20 E-value=0.026 Score=31.46 Aligned_cols=37 Identities=27% Similarity=0.206 Sum_probs=31.7
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
+.++.|.|.. ++|..-++.....|.+|+++++++++.
T Consensus 167 G~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~ 203 (339)
T COG1064 167 GKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKL 203 (339)
T ss_pred CCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHH
Confidence 4678999888 899888877777899999999998875
No 445
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.19 E-value=0.022 Score=31.72 Aligned_cols=34 Identities=24% Similarity=0.114 Sum_probs=27.7
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS-YTVKATVRD 38 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~ 38 (64)
+..+++|.|+ |++|..+++.|+..| .++.++|.+
T Consensus 27 ~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D 61 (355)
T PRK05597 27 FDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDD 61 (355)
T ss_pred hCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 3467888765 779999999999999 578888875
No 446
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=96.19 E-value=0.04 Score=28.19 Aligned_cols=37 Identities=24% Similarity=0.218 Sum_probs=31.4
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
..+++|-|+-|.+|++.++.|-.++|-|.-++..+++
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe 39 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENE 39 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccc
Confidence 4679999999999999999999999988877765443
No 447
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.19 E-value=0.018 Score=31.02 Aligned_cols=35 Identities=29% Similarity=0.260 Sum_probs=29.9
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+.+++|.|+++.+|..+++.....|.+|+...+++
T Consensus 140 ~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~ 174 (329)
T cd08250 140 GETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSD 174 (329)
T ss_pred CCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcH
Confidence 46799999999999998888888899988887654
No 448
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.18 E-value=0.023 Score=31.01 Aligned_cols=35 Identities=26% Similarity=0.286 Sum_probs=29.5
Q ss_pred EEEEecCcchHHHHHHHHHHHCC--CEEEEEEeCCCCc
Q 036468 7 VVCVTGASGFIASWLVKLLLQRS--YTVKATVRDLNNH 42 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~--~~v~~~~r~~~~~ 42 (64)
++.|.|+ |.+|..++..++..| .++.+++++++..
T Consensus 2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~ 38 (308)
T cd05292 2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKA 38 (308)
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhh
Confidence 5777787 899999999999988 6899999987644
No 449
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.18 E-value=0.02 Score=31.16 Aligned_cols=33 Identities=33% Similarity=0.423 Sum_probs=30.5
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEE
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKAT 35 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~ 35 (64)
..++++.+.|.++-+|+-++..|+++|++|+++
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~ 188 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLT 188 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEE
Confidence 467889999999999999999999999999987
No 450
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=96.17 E-value=0.019 Score=30.51 Aligned_cols=35 Identities=23% Similarity=0.110 Sum_probs=29.8
Q ss_pred EEecCcchHHHHHHHHHHHCC----CEEEEEEeCCCCcc
Q 036468 9 CVTGASGFIASWLVKLLLQRS----YTVKATVRDLNNHN 43 (64)
Q Consensus 9 ~i~g~~~~ig~~~~~~l~~~~----~~v~~~~r~~~~~~ 43 (64)
.|.|++|.+|..++..++..+ .++.++|++++...
T Consensus 2 ~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~ 40 (263)
T cd00650 2 AVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLK 40 (263)
T ss_pred EEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccch
Confidence 577998899999999999888 78999998876654
No 451
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=96.17 E-value=0.018 Score=31.57 Aligned_cols=36 Identities=28% Similarity=0.324 Sum_probs=29.6
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
+.+++|.|+ |.+|...++.....|.+|+++++++++
T Consensus 167 g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~ 202 (349)
T TIGR03201 167 GDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEK 202 (349)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHH
Confidence 467999998 999999888888889888888776543
No 452
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.16 E-value=0.048 Score=30.68 Aligned_cols=35 Identities=23% Similarity=0.153 Sum_probs=28.8
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCC-------CEEEEEEeCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRS-------YTVKATVRDLN 40 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~-------~~v~~~~r~~~ 40 (64)
.+++.|.|+ |.+|.+++..+.+.+ ++|.++.|++.
T Consensus 11 ~~ki~ViGa-G~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~ 52 (365)
T PTZ00345 11 PLKVSVIGS-GNWGSAISKVVGENTQRNYIFHNEVRMWVLEEI 52 (365)
T ss_pred CCeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEeccc
Confidence 456777755 679999999999887 79999999875
No 453
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=96.14 E-value=0.025 Score=31.25 Aligned_cols=35 Identities=23% Similarity=0.174 Sum_probs=28.3
Q ss_pred EEEEecCcchHHHHHHHHHHHCC-------CEEEEEEeCCCC
Q 036468 7 VVCVTGASGFIASWLVKLLLQRS-------YTVKATVRDLNN 41 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~-------~~v~~~~r~~~~ 41 (64)
++.|+|++|.+|.+++..++..+ ++++++|++++.
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~ 42 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM 42 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc
Confidence 47899999999999999998754 269999986553
No 454
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.13 E-value=0.027 Score=28.41 Aligned_cols=31 Identities=26% Similarity=0.318 Sum_probs=25.7
Q ss_pred EEEecCcchHHHHHHHHHHHCCC-EEEEEEeCC
Q 036468 8 VCVTGASGFIASWLVKLLLQRSY-TVKATVRDL 39 (64)
Q Consensus 8 ~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~~ 39 (64)
++|.| .|++|..+++.|++.|. ++.++|.+.
T Consensus 2 VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 2 VGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred EEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 56666 57899999999999995 699988764
No 455
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=96.12 E-value=0.032 Score=31.22 Aligned_cols=32 Identities=25% Similarity=0.255 Sum_probs=27.1
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
.++|. ++|.+|.+++.+|++.|.+|.++++..
T Consensus 3 ~vvII-GaG~~G~~~A~~La~~g~~V~vle~~~ 34 (410)
T PRK12409 3 HIAVI-GAGITGVTTAYALAQRGYQVTVFDRHR 34 (410)
T ss_pred EEEEE-CCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 45565 558899999999999999999999875
No 456
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.12 E-value=0.014 Score=26.20 Aligned_cols=30 Identities=23% Similarity=0.203 Sum_probs=25.3
Q ss_pred CcchHHHHHHHHHHHCC---CEEEEE-EeCCCCc
Q 036468 13 ASGFIASWLVKLLLQRS---YTVKAT-VRDLNNH 42 (64)
Q Consensus 13 ~~~~ig~~~~~~l~~~~---~~v~~~-~r~~~~~ 42 (64)
|+|.+|.++++.|++.| .+|.+. .|++++.
T Consensus 6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~ 39 (96)
T PF03807_consen 6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKA 39 (96)
T ss_dssp STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHH
Confidence 78889999999999999 899966 7766544
No 457
>PRK13236 nitrogenase reductase; Reviewed
Probab=96.11 E-value=0.022 Score=30.90 Aligned_cols=40 Identities=10% Similarity=-0.040 Sum_probs=30.0
Q ss_pred CCCCCeEEEEecCcchHHHHH-----HHHHHHCCCEEEEEEeCCC
Q 036468 1 MSGKGKVVCVTGASGFIASWL-----VKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~-----~~~l~~~~~~v~~~~r~~~ 40 (64)
|+-++++++...|-||+|++. +-.|++.|++|.++|-++.
T Consensus 1 ~~~~~~~~~~~~GKGGVGKTt~a~NLA~~La~~G~rVLliD~D~q 45 (296)
T PRK13236 1 MTDENIRQIAFYGKGGIGKSTTSQNTLAAMAEMGQRILIVGCDPK 45 (296)
T ss_pred CCCcCceEEEEECCCcCCHHHHHHHHHHHHHHCCCcEEEEEccCC
Confidence 444455666667899999866 5667788999999987754
No 458
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=96.10 E-value=0.02 Score=27.42 Aligned_cols=32 Identities=22% Similarity=0.202 Sum_probs=25.4
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCC-EEEEEEeC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSY-TVKATVRD 38 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~ 38 (64)
.++++. |.|++|..+++.|+..|. ++.++|.+
T Consensus 3 ~~v~ii-G~G~vGs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 3 KRVLII-GAGGVGSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp -EEEEE-STSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CEEEEE-CcCHHHHHHHHHHHHhCCCceeecCCc
Confidence 466666 556699999999999995 78888875
No 459
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=96.10 E-value=0.05 Score=30.10 Aligned_cols=36 Identities=25% Similarity=0.095 Sum_probs=30.7
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC--C-----EEEEEEeCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS--Y-----TVKATVRDL 39 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~--~-----~v~~~~r~~ 39 (64)
++.++.|.|++|.+|.+++..++..+ . +++++|.++
T Consensus 2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~ 44 (323)
T TIGR01759 2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPP 44 (323)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCC
Confidence 45688999999999999999998877 3 799999865
No 460
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.08 E-value=0.023 Score=30.14 Aligned_cols=35 Identities=20% Similarity=0.203 Sum_probs=28.2
Q ss_pred eEEEEecCcchHHHHHHHHHHHCC---CEEEEEEeCCCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRS---YTVKATVRDLNN 41 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~---~~v~~~~r~~~~ 41 (64)
+++.+.| .|.+|..++..+.+.+ ++|.+++|++..
T Consensus 3 m~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~ 40 (267)
T PRK11880 3 KKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSPEK 40 (267)
T ss_pred CEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCHHH
Confidence 4566776 5899999999999988 788898887644
No 461
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]
Probab=96.07 E-value=0.04 Score=30.37 Aligned_cols=35 Identities=17% Similarity=0.138 Sum_probs=29.7
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
.+.++|.| .|.+|.+++-+|++.|.+|+++++.+.
T Consensus 4 ~~~vvVIG-gGi~Gls~A~~La~~G~~V~vie~~~~ 38 (387)
T COG0665 4 KMDVVIIG-GGIVGLSAAYYLAERGADVTVLEAGEA 38 (387)
T ss_pred cceEEEEC-CcHHHHHHHHHHHHcCCEEEEEecCcc
Confidence 45677777 889999999999999999999987654
No 462
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.06 E-value=0.032 Score=30.84 Aligned_cols=36 Identities=22% Similarity=0.141 Sum_probs=29.7
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
.++++-|. |.|.+|+++++.+...|++|+++++++.
T Consensus 145 ~g~~VgII-G~G~IG~~vA~~L~~~G~~V~~~d~~~~ 180 (330)
T PRK12480 145 KNMTVAII-GTGRIGAATAKIYAGFGATITAYDAYPN 180 (330)
T ss_pred CCCEEEEE-CCCHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 45667666 4577999999999999999999998764
No 463
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=96.06 E-value=0.029 Score=30.18 Aligned_cols=35 Identities=20% Similarity=0.178 Sum_probs=30.1
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+.+++|.|+++.+|..+++.+...|.+|+++.+++
T Consensus 146 ~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~ 180 (329)
T cd05288 146 GETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSD 180 (329)
T ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 46789999999999999988888899988887654
No 464
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=96.04 E-value=0.026 Score=30.88 Aligned_cols=37 Identities=22% Similarity=0.218 Sum_probs=28.9
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCC-EEEEEEeCCCCc
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSY-TVKATVRDLNNH 42 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~~~~~ 42 (64)
+.+++|.|+ |.+|...++.+...|. +|+++++++++.
T Consensus 170 g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~ 207 (343)
T PRK09880 170 GKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSL 207 (343)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHH
Confidence 467889886 8999998887777787 688888776543
No 465
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.03 E-value=0.045 Score=29.86 Aligned_cols=36 Identities=28% Similarity=0.284 Sum_probs=31.6
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRD 38 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~ 38 (64)
..++++.|.|.++-+|+-++..|.+++.+|+++...
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~ 191 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK 191 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC
Confidence 467889999999999999999999999999876543
No 466
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=96.03 E-value=0.035 Score=30.67 Aligned_cols=37 Identities=27% Similarity=0.217 Sum_probs=29.9
Q ss_pred eEEEEecCcchHHHHHHHHHHHCC--CEEEEEEeCCCCcc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRS--YTVKATVRDLNNHN 43 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~--~~v~~~~r~~~~~~ 43 (64)
+++.++|+ |.+|++++..++.++ .++.+++++.+..+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~ 39 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAE 39 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEccccccc
Confidence 36788999 999999999997775 48999999854443
No 467
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=96.03 E-value=0.018 Score=31.29 Aligned_cols=37 Identities=32% Similarity=0.322 Sum_probs=32.4
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
..++++.|.|.+.-+|+-++..|++.+++|.++....
T Consensus 154 l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T 190 (283)
T COG0190 154 LRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRT 190 (283)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCC
Confidence 4678899999999999999999999999998876544
No 468
>PRK07236 hypothetical protein; Provisional
Probab=96.03 E-value=0.043 Score=30.56 Aligned_cols=36 Identities=19% Similarity=0.236 Sum_probs=29.5
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
+.++|+|.|| |-.|.+.+..|.+.|.+|.++.+.+.
T Consensus 5 ~~~~ViIVGa-G~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (386)
T PRK07236 5 SGPRAVVIGG-SLGGLFAALLLRRAGWDVDVFERSPT 40 (386)
T ss_pred CCCeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 4467888765 56899999999999999999998753
No 469
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=96.02 E-value=0.04 Score=28.56 Aligned_cols=34 Identities=21% Similarity=0.164 Sum_probs=31.3
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEE
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATV 36 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~ 36 (64)
..++++.|.|.+.-+|+-++..|++++++|++++
T Consensus 60 l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~ 93 (197)
T cd01079 60 LYGKTITIINRSEVVGRPLAALLANDGARVYSVD 93 (197)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCCEEEEEe
Confidence 5678999999999999999999999999999885
No 470
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=96.02 E-value=0.032 Score=32.45 Aligned_cols=34 Identities=18% Similarity=0.057 Sum_probs=27.9
Q ss_pred CCCeEEEEecC----------------cchHHHHHHHHHHHCCCEEEEEE
Q 036468 3 GKGKVVCVTGA----------------SGFIASWLVKLLLQRSYTVKATV 36 (64)
Q Consensus 3 ~~~~~~~i~g~----------------~~~ig~~~~~~l~~~~~~v~~~~ 36 (64)
+.+++++||+| +|.+|.++++.+...|++|+++.
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~ 303 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLIS 303 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEe
Confidence 34667777755 46799999999999999998876
No 471
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=96.02 E-value=0.027 Score=29.21 Aligned_cols=35 Identities=29% Similarity=0.281 Sum_probs=29.6
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
+.+++|+|+++ +|..+++.+...|.+|+++++++.
T Consensus 135 ~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~ 169 (271)
T cd05188 135 GDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDE 169 (271)
T ss_pred CCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHH
Confidence 46799999988 999999888888999988887653
No 472
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.01 E-value=0.031 Score=31.83 Aligned_cols=38 Identities=29% Similarity=0.420 Sum_probs=31.2
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCC-EEEEEEeCCCCc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSY-TVKATVRDLNNH 42 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~~~~~ 42 (64)
.++++++.|+ |.+|..++..+...|. +|++++|++...
T Consensus 181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra 219 (423)
T PRK00045 181 SGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERA 219 (423)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHH
Confidence 4578888876 8899999999998886 899999876543
No 473
>PRK13886 conjugal transfer protein TraL; Provisional
Probab=96.00 E-value=0.029 Score=29.86 Aligned_cols=38 Identities=13% Similarity=0.050 Sum_probs=29.6
Q ss_pred CeEEEEecCcchHHHHH-----HHHHHHCCCEEEEEEeCCCCc
Q 036468 5 GKVVCVTGASGFIASWL-----VKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~-----~~~l~~~~~~v~~~~r~~~~~ 42 (64)
.+.+++.++-||+|++. +.+++..|.+|.+++-++.+.
T Consensus 2 ~~i~~i~~~KGGvGKSt~a~~la~~l~~~g~~vl~iD~D~~n~ 44 (241)
T PRK13886 2 AKIHMVLQGKGGVGKSFIAATIAQYKASKGQKPLCIDTDPVNA 44 (241)
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHHHhCCCCEEEEECCCCCc
Confidence 36778888999998866 455666789999999887664
No 474
>PLN00203 glutamyl-tRNA reductase
Probab=95.99 E-value=0.019 Score=33.59 Aligned_cols=39 Identities=26% Similarity=0.279 Sum_probs=32.4
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCC-EEEEEEeCCCCc
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSY-TVKATVRDLNNH 42 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~-~v~~~~r~~~~~ 42 (64)
..++++++.|+ |.+|..+++.|...|. +|+++.|++++.
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era 303 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERV 303 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHH
Confidence 34678899988 9999999999999985 799999887554
No 475
>PLN02712 arogenate dehydrogenase
Probab=95.99 E-value=0.037 Score=33.39 Aligned_cols=35 Identities=23% Similarity=0.295 Sum_probs=30.0
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+.+++.+.| .|.+|.++++.|.+.|++|++++|+.
T Consensus 368 ~~~kIgIIG-lG~mG~slA~~L~~~G~~V~~~dr~~ 402 (667)
T PLN02712 368 SKLKIAIVG-FGNFGQFLAKTMVKQGHTVLAYSRSD 402 (667)
T ss_pred CCCEEEEEe-cCHHHHHHHHHHHHCcCEEEEEECCh
Confidence 346777877 78999999999999999999998874
No 476
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.99 E-value=0.02 Score=31.19 Aligned_cols=37 Identities=24% Similarity=0.201 Sum_probs=32.4
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
..++++.|.|.+.-+|+-++..|.+++.+|+++....
T Consensus 157 l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T 193 (284)
T PRK14177 157 VTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKT 193 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC
Confidence 4678999999999999999999999999998876443
No 477
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.98 E-value=0.045 Score=29.91 Aligned_cols=38 Identities=24% Similarity=0.266 Sum_probs=32.9
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
..+++++|.|.+.-+|+-++..|.+++++|+++.....
T Consensus 162 l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~ 199 (287)
T PRK14176 162 IEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTD 199 (287)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCC
Confidence 46789999999999999999999999999988775443
No 478
>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=95.98 E-value=0.032 Score=30.94 Aligned_cols=39 Identities=15% Similarity=0.089 Sum_probs=29.5
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
|+++...++|.|+ |-.|.+++..|.+.|.+|.++.+.+.
T Consensus 3 ~~~~~~dViIVGa-G~~Gl~~A~~L~~~G~~v~liE~~~~ 41 (388)
T PRK07494 3 MEKEHTDIAVIGG-GPAGLAAAIALARAGASVALVAPEPP 41 (388)
T ss_pred CCCCCCCEEEECc-CHHHHHHHHHHhcCCCeEEEEeCCCC
Confidence 3334445777765 45799999999999999999998754
No 479
>PRK08818 prephenate dehydrogenase; Provisional
Probab=95.97 E-value=0.039 Score=31.11 Aligned_cols=34 Identities=26% Similarity=0.452 Sum_probs=29.2
Q ss_pred CeEEEEecCcchHHHHHHHHHHHC-CCEEEEEEeC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQR-SYTVKATVRD 38 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~-~~~v~~~~r~ 38 (64)
.+++.|.|.+|.+|.++++.|.+. +++|+..++.
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~ 38 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPA 38 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCC
Confidence 467889999999999999999864 7899988874
No 480
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=95.97 E-value=0.026 Score=30.04 Aligned_cols=36 Identities=36% Similarity=0.373 Sum_probs=31.1
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
+..++|.|+++.+|..++..+...|.+|+..+++++
T Consensus 133 ~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~ 168 (305)
T cd08270 133 GRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPA 168 (305)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 567999999999999999988888999988877553
No 481
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=95.96 E-value=0.03 Score=30.83 Aligned_cols=33 Identities=27% Similarity=0.097 Sum_probs=28.2
Q ss_pred EEEEecCcchHHHHHHHHHHHCC--CEEEEEEeCC
Q 036468 7 VVCVTGASGFIASWLVKLLLQRS--YTVKATVRDL 39 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~--~~v~~~~r~~ 39 (64)
++.|.|++|.+|.+++..++..+ .+++++|+++
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~ 35 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG 35 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 36788999999999999998876 4789999876
No 482
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=95.95 E-value=0.019 Score=31.14 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=28.3
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
++-+.| .|.+|..+++.|.+.|++|.+++|++++.
T Consensus 2 ~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~ 36 (298)
T TIGR00872 2 QLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAV 36 (298)
T ss_pred EEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 344554 68899999999999999999999876543
No 483
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=95.94 E-value=0.018 Score=32.50 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=28.2
Q ss_pred EEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 7 VVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 7 ~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
++-+. |.|.+|..++..|++.|++|+++++++..
T Consensus 2 kI~vI-GlG~~G~~lA~~La~~G~~V~~~d~~~~~ 35 (411)
T TIGR03026 2 KIAVI-GLGYVGLPLAALLADLGHEVTGVDIDQEK 35 (411)
T ss_pred EEEEE-CCCchhHHHHHHHHhcCCeEEEEECCHHH
Confidence 34454 57889999999999999999999987654
No 484
>PRK08163 salicylate hydroxylase; Provisional
Probab=95.93 E-value=0.048 Score=30.31 Aligned_cols=38 Identities=18% Similarity=0.060 Sum_probs=29.8
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
|+ +.+.|+|.|+.- .|.+++..|.+.|.+|.++.+.+.
T Consensus 1 ~~-~~~~V~IvGaGi-aGl~~A~~L~~~g~~v~v~Er~~~ 38 (396)
T PRK08163 1 MT-KVTPVLIVGGGI-GGLAAALALARQGIKVKLLEQAAE 38 (396)
T ss_pred CC-CCCeEEEECCcH-HHHHHHHHHHhCCCcEEEEeeCcc
Confidence 44 345677776654 788899999999999999998764
No 485
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.92 E-value=0.047 Score=29.81 Aligned_cols=35 Identities=31% Similarity=0.333 Sum_probs=31.2
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEEe
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATVR 37 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r 37 (64)
..+++++|.|++..+|+-++..|.++|.+|+++..
T Consensus 155 l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs 189 (285)
T PRK14191 155 IKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI 189 (285)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC
Confidence 45789999999999999999999999999988654
No 486
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=95.92 E-value=0.028 Score=29.82 Aligned_cols=35 Identities=29% Similarity=0.222 Sum_probs=30.2
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+..++|.|+++.+|..++..+...|.+|+.+++++
T Consensus 140 ~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~ 174 (323)
T cd08241 140 GETVLVLGAAGGVGLAAVQLAKALGARVIAAASSE 174 (323)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCH
Confidence 46789999999999999988888899998887654
No 487
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.91 E-value=0.053 Score=30.38 Aligned_cols=37 Identities=32% Similarity=0.483 Sum_probs=28.3
Q ss_pred CCCCCeEEEEecCcchHHHHHHHHHHHC-CCE---EEEEEe
Q 036468 1 MSGKGKVVCVTGASGFIASWLVKLLLQR-SYT---VKATVR 37 (64)
Q Consensus 1 ~~~~~~~~~i~g~~~~ig~~~~~~l~~~-~~~---v~~~~r 37 (64)
|+.+..++-|.|++|++|..+++.|..+ ..+ +..+..
T Consensus 1 ~~~~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS 41 (347)
T PRK06728 1 MSEKGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSS 41 (347)
T ss_pred CCCCCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEEC
Confidence 5556678889999999999999999964 445 544443
No 488
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=95.90 E-value=0.061 Score=29.69 Aligned_cols=38 Identities=21% Similarity=0.156 Sum_probs=31.4
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeCCCCc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS-YTVKATVRDLNNH 42 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~~~~ 42 (64)
+.+++.|.| .|.+|..++..++..+ .+++++|.+++..
T Consensus 5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~ 43 (321)
T PTZ00082 5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIP 43 (321)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchh
Confidence 456788888 5889999999998888 4899999988754
No 489
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=95.90 E-value=0.024 Score=29.10 Aligned_cols=33 Identities=9% Similarity=0.016 Sum_probs=26.5
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRS-YTVKATVRD 38 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~ 38 (64)
..++++.|+ |++|.++++.|+..| .++.++|.+
T Consensus 21 ~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 21 SARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred hCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence 457888865 559999999999999 478888765
No 490
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=95.90 E-value=0.042 Score=30.84 Aligned_cols=36 Identities=17% Similarity=0.159 Sum_probs=29.9
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNN 41 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~ 41 (64)
..+++|.|+ |.+|...++.+...|.+|+++++++..
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~ 202 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDR 202 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence 456888876 789999999999999999999987543
No 491
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=95.88 E-value=0.041 Score=29.47 Aligned_cols=35 Identities=37% Similarity=0.360 Sum_probs=30.0
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+..++|.|+++.+|..+++.+...|.+|+.+++++
T Consensus 143 ~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~ 177 (324)
T cd08244 143 GDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGP 177 (324)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45799999999999999888888899998887654
No 492
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=95.88 E-value=0.03 Score=30.00 Aligned_cols=35 Identities=23% Similarity=0.250 Sum_probs=29.9
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDL 39 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~ 39 (64)
+.+++|.|++|.+|...++.....|.++++..++.
T Consensus 140 g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~ 174 (324)
T cd08292 140 GQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRD 174 (324)
T ss_pred CCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCH
Confidence 46799999999999999988888899988876644
No 493
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=95.88 E-value=0.039 Score=30.16 Aligned_cols=37 Identities=22% Similarity=0.206 Sum_probs=28.8
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
+.+++|.|+ |.+|...++.....|.+|+++++++.+.
T Consensus 166 g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~ 202 (329)
T TIGR02822 166 GGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAAR 202 (329)
T ss_pred CCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHH
Confidence 467899997 8899887776667788888888776543
No 494
>PRK12767 carbamoyl phosphate synthase-like protein; Provisional
Probab=95.88 E-value=0.029 Score=30.46 Aligned_cols=34 Identities=24% Similarity=0.013 Sum_probs=27.2
Q ss_pred eEEEEecCcchHHHHHHHHHHHCC--CEEEEEEeCCCC
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRS--YTVKATVRDLNN 41 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~--~~v~~~~r~~~~ 41 (64)
+++++||+.... .+++.+.+.+ ++|++.+.++..
T Consensus 2 ~~vLv~g~~~~~--~~~~~l~~~~~g~~vi~~d~~~~~ 37 (326)
T PRK12767 2 MNILVTSAGRRV--QLVKALKKSLLKGRVIGADISELA 37 (326)
T ss_pred ceEEEecCCccH--HHHHHHHHhccCCEEEEECCCCcc
Confidence 589999998776 7888888884 899998876543
No 495
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.87 E-value=0.0042 Score=32.93 Aligned_cols=26 Identities=35% Similarity=0.294 Sum_probs=20.7
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSY 30 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~ 30 (64)
.+.+++||++++||...+..+...+.
T Consensus 6 r~villTGaSrgiG~~~v~~i~aed~ 31 (253)
T KOG1204|consen 6 RKVILLTGASRGIGTGSVATILAEDD 31 (253)
T ss_pred ceEEEEecCCCCccHHHHHHHHhcch
Confidence 46789999999999877777766553
No 496
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.86 E-value=0.041 Score=32.70 Aligned_cols=36 Identities=19% Similarity=0.310 Sum_probs=29.2
Q ss_pred eEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 6 KVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 6 ~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
..++|.| .|.+|+.+++.|.++++++++++.+++..
T Consensus 401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v 436 (601)
T PRK03659 401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAV 436 (601)
T ss_pred CCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHH
Confidence 4566665 66799999999999999999999887543
No 497
>PF00208 ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; InterPro: IPR006096 Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction. Glutamate dehydrogenases (1.4.1.2 from EC, 1.4.1.3 from EC, and 1.4.1.4 from EC) (GluDH) are enzymes that catalyse the NAD- and/or NADP-dependent reversible deamination of L-glutamate into alpha-ketoglutarate [, ]. GluDH isozymes are generally involved with either ammonia assimilation or glutamate catabolism. Two separate enzymes are present in yeasts: the NADP-dependent enzyme, which catalyses the amination of alpha-ketoglutarate to L-glutamate; and the NAD-dependent enzyme, which catalyses the reverse reaction [] - this form links the L-amino acids with the Krebs cycle, which provides a major pathway for metabolic interconversion of alpha-amino acids and alpha- keto acids []. Leucine dehydrogenase (1.4.1.9 from EC) (LeuDH) is a NAD-dependent enzyme that catalyses the reversible deamination of leucine and several other aliphatic amino acids to their keto analogues []. Each subunit of this octameric enzyme from Bacillus sphaericus contains 364 amino acids and folds into two domains, separated by a deep cleft. The nicotinamide ring of the NAD+ cofactor binds deep in this cleft, which is thought to close during the hydride transfer step of the catalytic cycle. Phenylalanine dehydrogenase (1.4.1.20 from EC) (PheDH) is na NAD-dependent enzyme that catalyses the reversible deamidation of L-phenylalanine into phenyl-pyruvate []. Valine dehydrogenase (1.4.1.8 from EC) (ValDH) is an NADP-dependent enzyme that catalyses the reversible deamidation of L-valine into 3-methyl-2-oxobutanoate []. This entry represents the C-terminal domain of these proteins.; GO: 0016491 oxidoreductase activity, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process; PDB: 1LEH_A 3AOG_D 3AOE_A 2YFQ_B 2YFH_B 1HRD_A 1K89_A 1AUP_A 1BGV_A 1B26_C ....
Probab=95.85 E-value=0.066 Score=28.53 Aligned_cols=33 Identities=27% Similarity=0.322 Sum_probs=27.4
Q ss_pred CCCeEEEEecCcchHHHHHHHHHHHCCCEEEEEE
Q 036468 3 GKGKVVCVTGASGFIASWLVKLLLQRSYTVKATV 36 (64)
Q Consensus 3 ~~~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~ 36 (64)
++++++.|-|. |.+|.+.++.|.+.|.+|+.+.
T Consensus 30 l~g~~v~IqGf-G~VG~~~a~~l~~~Ga~vv~vs 62 (244)
T PF00208_consen 30 LEGKRVAIQGF-GNVGSHAARFLAELGAKVVAVS 62 (244)
T ss_dssp STTCEEEEEES-SHHHHHHHHHHHHTTEEEEEEE
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEe
Confidence 45677877655 9999999999999999987773
No 498
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=95.84 E-value=0.052 Score=23.64 Aligned_cols=30 Identities=23% Similarity=0.157 Sum_probs=26.9
Q ss_pred CcchHHHHHHHHHHHCCCEEEEEEeCCCCc
Q 036468 13 ASGFIASWLVKLLLQRSYTVKATVRDLNNH 42 (64)
Q Consensus 13 ~~~~ig~~~~~~l~~~~~~v~~~~r~~~~~ 42 (64)
++|.+|..++..|.+.+.+|+++.+++...
T Consensus 6 GgG~ig~E~A~~l~~~g~~vtli~~~~~~~ 35 (80)
T PF00070_consen 6 GGGFIGIELAEALAELGKEVTLIERSDRLL 35 (80)
T ss_dssp SSSHHHHHHHHHHHHTTSEEEEEESSSSSS
T ss_pred CcCHHHHHHHHHHHHhCcEEEEEeccchhh
Confidence 678899999999999999999999987665
No 499
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=95.84 E-value=0.029 Score=29.88 Aligned_cols=36 Identities=25% Similarity=0.274 Sum_probs=30.5
Q ss_pred CeEEEEecCcchHHHHHHHHHHHCCCEEEEEEeCCC
Q 036468 5 GKVVCVTGASGFIASWLVKLLLQRSYTVKATVRDLN 40 (64)
Q Consensus 5 ~~~~~i~g~~~~ig~~~~~~l~~~~~~v~~~~r~~~ 40 (64)
+..++|.|+++.+|..+++.....|.+|+.+.++++
T Consensus 143 g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~ 178 (320)
T cd08243 143 GDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPE 178 (320)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 467999999999999998888888999888776543
No 500
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=95.84 E-value=0.027 Score=30.77 Aligned_cols=38 Identities=29% Similarity=0.350 Sum_probs=30.7
Q ss_pred CCeEEEEecCcchHHHHHHHHHHHCC-CEEEEEEeCCCCc
Q 036468 4 KGKVVCVTGASGFIASWLVKLLLQRS-YTVKATVRDLNNH 42 (64)
Q Consensus 4 ~~~~~~i~g~~~~ig~~~~~~l~~~~-~~v~~~~r~~~~~ 42 (64)
.++++++.|+ |.+|..+++.+...| .+|++++|++++.
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra 215 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERA 215 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence 4678888876 899999999998866 6899999876543
Done!