Query 036469
Match_columns 171
No_of_seqs 141 out of 1129
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 03:14:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036469.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036469hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ixz_A Potassium-transporting 100.0 3.4E-28 1.2E-32 222.1 17.1 162 1-163 824-1025(1034)
2 2zxe_A Na, K-ATPase alpha subu 99.9 1.3E-25 4.4E-30 205.0 14.1 160 1-161 819-1017(1028)
3 3ar4_A Sarcoplasmic/endoplasmi 99.9 6.3E-25 2.2E-29 200.0 18.2 159 1-160 800-991 (995)
4 1mhs_A Proton pump, plasma mem 99.7 2.4E-17 8.1E-22 148.8 9.5 149 1-162 729-882 (920)
5 3b8c_A ATPase 2, plasma membra 99.0 1.1E-12 3.8E-17 118.3 -11.9 148 2-160 684-843 (885)
6 2voy_D Sarcoplasmic/endoplasmi 42.1 30 0.001 16.7 3.3 21 36-56 3-23 (26)
7 4ev6_A Magnesium transport pro 23.3 75 0.0026 24.8 3.8 7 123-129 295-301 (339)
8 2iub_A CORA, divalent cation t 22.4 1.1E+02 0.0036 24.2 4.5 38 123-160 319-360 (363)
9 3omd_A Uncharacterized protein 17.9 60 0.002 22.6 1.8 18 15-32 5-22 (145)
10 2knc_B Integrin beta-3; transm 17.0 70 0.0024 19.7 1.8 10 157-166 38-47 (79)
No 1
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=99.96 E-value=3.4e-28 Score=222.11 Aligned_cols=162 Identities=14% Similarity=0.182 Sum_probs=138.0
Q ss_pred CchhhhhhhccCCCCccCcCCCCCCC-CCCCCcHHHHHHHH-HHHHHHHHHHHHHHHHhhhhcCC---------------
Q 036469 1 MDTLGALALATEQPTNDLMSKPPVGR-SEPLITKLMWRNLI-PQAIYQVAILLTLQFKGRSIFGV--------------- 63 (171)
Q Consensus 1 ~D~~palaL~~ep~~~~~M~r~Pr~~-~~~ll~~~~~~~i~-~~g~~~~~~~~~~~~~~~~~~g~--------------- 63 (171)
||++||++|++||+|+++|+||||++ ++++++++++.++. ..|++++++++..|++.....|.
T Consensus 824 ~d~~palal~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 903 (1034)
T 3ixz_A 824 TDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENH 903 (1034)
T ss_pred HHHHHHHHhhcCCCChhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccc
Confidence 68999999999999999999999998 79999999877654 45888888888877654321110
Q ss_pred ---c-----------------cchhhHHHHHHHHHHHHHHHHhhhcCCcccccc-ccccCHHHHHHHHHHHHHHHHHH--
Q 036469 64 ---Q-----------------ESAKDTMIFNTFVFCQIFNEFNARKLEKKNIFK-GIHKNKLFLAIIGITIVLQLIMV-- 120 (171)
Q Consensus 64 ---~-----------------~~~a~T~~F~~lv~~q~~~~~~~R~~~~~~~~~-~~~~N~~l~~~~~~~~~l~~~~v-- 120 (171)
+ ...+||++|+++|++|++|+++||+. +.++|+ ++++|+++++++++++++|++++
T Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~-~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~ 982 (1034)
T 3ixz_A 904 HLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTR-RLSAFQQGFFRNRILVIAIVFQVCIGCFLCYC 982 (1034)
T ss_pred cccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccC-CCcccccCCcccHHHHHHHHHHHHHHHHHHHh
Confidence 0 01389999999999999999999996 467775 78999999999999999998765
Q ss_pred HhhhhhhccccCChhHHHHHHHHHHHHHHHHHHHHhccccccc
Q 036469 121 EFLKKFADTERLNWGQWAACIGIAAMSWPIGFLFKCIPVSGEQ 163 (171)
Q Consensus 121 ~~l~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~i~r~~~~ 163 (171)
|+++.+|++.|+++.+|+++++++++++++.|++|++.|+.+.
T Consensus 983 p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~~~ 1025 (1034)
T 3ixz_A 983 PGMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCPG 1025 (1034)
T ss_pred hhHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6799999999999999999999999999999999999887653
No 2
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=99.93 E-value=1.3e-25 Score=204.98 Aligned_cols=160 Identities=17% Similarity=0.108 Sum_probs=135.0
Q ss_pred CchhhhhhhccCCCCccCcCCCCCCCCC-CCCcHHHHHH-HHHHHHHHHHHHHHHHHHhhhhcCC---------------
Q 036469 1 MDTLGALALATEQPTNDLMSKPPVGRSE-PLITKLMWRN-LIPQAIYQVAILLTLQFKGRSIFGV--------------- 63 (171)
Q Consensus 1 ~D~~palaL~~ep~~~~~M~r~Pr~~~~-~ll~~~~~~~-i~~~g~~~~~~~~~~~~~~~~~~g~--------------- 63 (171)
||++|+++|++||+|+++|+||||++++ ++++++++.+ ++..|++++++++++|++.....|.
T Consensus 819 ~d~~pa~al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 898 (1028)
T 2zxe_A 819 TDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDR 898 (1028)
T ss_dssp TTHHHHHHGGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCT
T ss_pred HHHHHHHHhccCccchhhhccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccc
Confidence 6899999999999999999999999876 9999998766 4567888888888777653211110
Q ss_pred ---------c-----------cchhhHHHHHHHHHHHHHHHHhhhcCCccccccccccCHHHHHHHHHHHHHHHHHH--H
Q 036469 64 ---------Q-----------ESAKDTMIFNTFVFCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIVLQLIMV--E 121 (171)
Q Consensus 64 ---------~-----------~~~a~T~~F~~lv~~q~~~~~~~R~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~v--~ 121 (171)
+ ..++||++|+++|++|++|.++||+. +.++|+..++|+++++++++++++|++++ |
T Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p 977 (1028)
T 2zxe_A 899 WISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTR-RNSIFQQGMKNKILIFGLFEETALAAFLSYCP 977 (1028)
T ss_dssp TCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS-SSCHHHHCSCCHHHHHHHHHHHHHHHHHHHST
T ss_pred cccccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccC-CcchhccCCcCHHHHHHHHHHHHHHHHHHHhh
Confidence 0 02689999999999999999999996 46777644899999999999999998776 4
Q ss_pred hhhhhhccccCChhHHHHHHHHHHHHHHHHHHHHhccccc
Q 036469 122 FLKKFADTERLNWGQWAACIGIAAMSWPIGFLFKCIPVSG 161 (171)
Q Consensus 122 ~l~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~i~r~~ 161 (171)
+++.+|+++|+++.+|++++++++..+++.|++|++.|+.
T Consensus 978 ~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 978 GTDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp THHHHTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 7899999999999999999999999999999999987654
No 3
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=99.93 E-value=6.3e-25 Score=200.00 Aligned_cols=159 Identities=20% Similarity=0.247 Sum_probs=135.6
Q ss_pred CchhhhhhhccCCCCccCcCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cCC----------------
Q 036469 1 MDTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVAILLTLQFKGRSI-FGV---------------- 63 (171)
Q Consensus 1 ~D~~palaL~~ep~~~~~M~r~Pr~~~~~ll~~~~~~~i~~~g~~~~~~~~~~~~~~~~~-~g~---------------- 63 (171)
+|++|+++|+.||+|+++|+||||++++++++++++.+++.+|++++++++.+|.+.... .+.
T Consensus 800 ~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (995)
T 3ar4_A 800 TDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTE 879 (995)
T ss_dssp TTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSS
T ss_pred HHHHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhcccccccc
Confidence 689999999999999999999999999999999999999999999988877655442210 000
Q ss_pred -------------ccchhhHHHHHHHHHHHHHHHHhhhcCCccccc-cccccCHHHHHHHHHHHHHHHHHH--Hhhhhhh
Q 036469 64 -------------QESAKDTMIFNTFVFCQIFNEFNARKLEKKNIF-KGIHKNKLFLAIIGITIVLQLIMV--EFLKKFA 127 (171)
Q Consensus 64 -------------~~~~a~T~~F~~lv~~q~~~~~~~R~~~~~~~~-~~~~~N~~l~~~~~~~~~l~~~~v--~~l~~~f 127 (171)
....+||++|+++|++|++|.++||+.+ .+++ .+.++|++++++++++++++++++ |+++++|
T Consensus 880 ~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~-~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f 958 (995)
T 3ar4_A 880 DHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSEN-QSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIF 958 (995)
T ss_dssp CCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSS-CCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHHHT
T ss_pred ccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccc-cchhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 0135899999999999999999999964 4555 477899999999999998888765 5789999
Q ss_pred ccccCChhHHHHHHHHHHHHHHHHHHHHhcccc
Q 036469 128 DTERLNWGQWAACIGIAAMSWPIGFLFKCIPVS 160 (171)
Q Consensus 128 ~~~~l~~~~w~~~~~~~~~~~~~~e~~K~i~r~ 160 (171)
++.|+++.+|++++++++..+++.|++|++.|+
T Consensus 959 ~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~ 991 (995)
T 3ar4_A 959 KLKALDLTQWLMVLKISLPVIGLDEILKFIARN 991 (995)
T ss_dssp TCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999998764
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=99.70 E-value=2.4e-17 Score=148.81 Aligned_cols=149 Identities=11% Similarity=0.010 Sum_probs=114.8
Q ss_pred CchhhhhhhccCCCCccCcCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhh---cC--CccchhhHHHHHH
Q 036469 1 MDTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVAILLTLQFKGRSI---FG--VQESAKDTMIFNT 75 (171)
Q Consensus 1 ~D~~palaL~~ep~~~~~M~r~Pr~~~~~ll~~~~~~~i~~~g~~~~~~~~~~~~~~~~~---~g--~~~~~a~T~~F~~ 75 (171)
+|. |+++|++||++++ ||||+++++ +++..++..|.+++++++..|.+.... .+ .+..++||++|++
T Consensus 729 ~d~-~~lal~~e~~~~~---~~P~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~ 800 (920)
T 1mhs_A 729 ADV-ATLAIAYDNAPYS---QTPVKWNLP----KLWGMSVLLGVVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQ 800 (920)
T ss_dssp HTT-HHHHCCCCCSGGG---GSCCCCCSS----SCSSCHHHHHHHHHHHHHHHHHHHTTTTTTCCSSSSSSSHHHHHHHH
T ss_pred HHH-HhhhhcccCcccc---cCCCCchHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHHHH
Confidence 355 8999999999885 789888763 333345567887777777666544321 11 1235689999999
Q ss_pred HHHHHHHHHHhhhcCCccccccccccCHHHHHHHHHHHHHHHHHHHhhhhhhccccCChhHHHHHHHHHHHHHHHHHHHH
Q 036469 76 FVFCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIVLQLIMVEFLKKFADTERLNWGQWAACIGIAAMSWPIGFLFK 155 (171)
Q Consensus 76 lv~~q~~~~~~~R~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~v~~l~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K 155 (171)
++++|+++.+++|+.+ .++++ +.|++++.++++..++++.+.+ .+ +|++.|+++.+|+.+++.+++.+++.|+.|
T Consensus 801 lv~~~~~~~~~~R~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~-~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k 875 (920)
T 1mhs_A 801 ISLTENWLIFITRANG--PFWSS-IPSWQLSGAIFLVDILATCFTI-WG-WFEHSDTSIVAVVRIWIFSFGIFCIMGGVY 875 (920)
T ss_dssp HHHHHHHHTTSSSCSS--SCSCC-SCTHHHHHHHHHHHHHHHHHHS-SS-STTSCSHHHHTHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccch--hhhcC-chHHHHHHHHHHHHHHHHHHHH-hh-hhccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999953 46654 4889888888888777776554 33 899999999999999999999999999999
Q ss_pred hcccccc
Q 036469 156 CIPVSGE 162 (171)
Q Consensus 156 ~i~r~~~ 162 (171)
++.++.+
T Consensus 876 ~~~~~~~ 882 (920)
T 1mhs_A 876 YILQDSV 882 (920)
T ss_dssp HCCCCCC
T ss_pred HHHhhhH
Confidence 9877653
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=98.95 E-value=1.1e-12 Score=118.26 Aligned_cols=148 Identities=14% Similarity=0.126 Sum_probs=95.8
Q ss_pred chhhhhhhccCCCCccCcCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhh------cCCc-----cchhhH
Q 036469 2 DTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVAILLTLQFKGRSI------FGVQ-----ESAKDT 70 (171)
Q Consensus 2 D~~palaL~~ep~~~~~M~r~Pr~~~~~ll~~~~~~~i~~~g~~~~~~~~~~~~~~~~~------~g~~-----~~~a~T 70 (171)
|+.+ ++++.|+.++ ||+|++..+ +.++...++.|.++++.++..|++.... .+.+ ..++||
T Consensus 684 d~~~-l~l~~~~~~~------~~~p~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 755 (885)
T 3b8c_A 684 DGTI-MTISKDRVKP------SPTPDSWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMG 755 (885)
T ss_dssp HTTT-CCCCCCCCCC------SSCCCSTTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHT
T ss_pred HHHH-HhhcccccCc------ccCCcchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccCcccccchHHHHHH
Confidence 4554 8888888655 344444444 4445556677888888777766544310 1211 234555
Q ss_pred H-HHHHHHHHHHHHHHhhhcCCccccccccccCHHHHHHHHHHHHHHHHHHHhhhhhhccccCChhHHHHHHHHHHHHHH
Q 036469 71 M-IFNTFVFCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIVLQLIMVEFLKKFADTERLNWGQWAACIGIAAMSWP 149 (171)
Q Consensus 71 ~-~F~~lv~~q~~~~~~~R~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~v~~l~~~f~~~~l~~~~w~~~~~~~~~~~~ 149 (171)
+ +|.+++++|+ +.|++|+. +.++++.. .|++++..++..++++++.++....+|++.|+++.+|+++++.+++.++
T Consensus 756 ~~~~~~~~~~~~-~~~~~Rs~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 832 (885)
T 3b8c_A 756 AVYLQVSIISQA-LIFVTRSR-SWSFVERP-GALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYF 832 (885)
T ss_dssp TTTTTTSSTTGG-GTTCSSSC-TTTSTTST-TTTTSGGGSSTTTTTTSSSSSCCCCSSCCCCCTTTTHHHHHHHTGGGTH
T ss_pred HHHHHHHHHHHH-HHHHhccC-CCCcccCc-cHHHHHHHHHHHHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHH
Confidence 4 6667888997 89999996 34444322 4444444444444455544454234567999999999999999999999
Q ss_pred HHHHHHhcccc
Q 036469 150 IGFLFKCIPVS 160 (171)
Q Consensus 150 ~~e~~K~i~r~ 160 (171)
+.|+.|++.|+
T Consensus 833 ~~e~~k~~~~~ 843 (885)
T 3b8c_A 833 PLDVFKFAIRY 843 (885)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHH
Confidence 99999998765
No 6
>2voy_D Sarcoplasmic/endoplasmic reticulum calcium ATPase 1; hydrolasep-type ATPase, cryo-EM, helical reconstruction, membrane protein; 17.50A {Oryctolagus cuniculus}
Probab=42.05 E-value=30 Score=16.68 Aligned_cols=21 Identities=10% Similarity=-0.086 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 036469 36 WRNLIPQAIYQVAILLTLQFK 56 (171)
Q Consensus 36 ~~~i~~~g~~~~~~~~~~~~~ 56 (171)
..|.+.+|++.++.+.++|.+
T Consensus 3 ~~Ry~viG~yvg~aTvg~f~~ 23 (26)
T 2voy_D 3 FFRYMAIGGYVGAATVGAAAW 23 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHhhheeEE
Confidence 456788899999988888764
No 7
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=23.29 E-value=75 Score=24.80 Aligned_cols=7 Identities=0% Similarity=0.007 Sum_probs=3.7
Q ss_pred hhhhhcc
Q 036469 123 LKKFADT 129 (171)
Q Consensus 123 l~~~f~~ 129 (171)
+..+||+
T Consensus 295 IaGiyGM 301 (339)
T 4ev6_A 295 ITGIYGM 301 (339)
T ss_dssp HHHHTTC
T ss_pred HHhhccC
Confidence 4555555
No 8
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=22.35 E-value=1.1e+02 Score=24.22 Aligned_cols=38 Identities=11% Similarity=0.059 Sum_probs=12.6
Q ss_pred hhhhhcc--ccCChhH--HHHHHHHHHHHHHHHHHHHhcccc
Q 036469 123 LKKFADT--ERLNWGQ--WAACIGIAAMSWPIGFLFKCIPVS 160 (171)
Q Consensus 123 l~~~f~~--~~l~~~~--w~~~~~~~~~~~~~~e~~K~i~r~ 160 (171)
+..+||+ ..++..+ |++.+.+++..++..-..-+++|+
T Consensus 319 IaGiyGMNf~~mPel~~~~Gy~~~l~~m~~i~~~~~~~Fkrk 360 (363)
T 2iub_A 319 IAGIYGMNFEYMPELRWKWGYPVVLAVMGVIAVIMVVYFKKK 360 (363)
T ss_dssp HTTSCC--------------CHHHHHHHHHHHHHHHTTTTSC
T ss_pred HHhhhcccCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4555554 2244333 344333333333333344455554
No 9
>3omd_A Uncharacterized protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, unknown function; HET: MSE; 1.50A {Leptospirillum rubarum}
Probab=17.88 E-value=60 Score=22.59 Aligned_cols=18 Identities=22% Similarity=0.130 Sum_probs=13.9
Q ss_pred CccCcCCCCCCCCCCCCc
Q 036469 15 TNDLMSKPPVGRSEPLIT 32 (171)
Q Consensus 15 ~~~~M~r~Pr~~~~~ll~ 32 (171)
.+|+-+++||++.+.+=+
T Consensus 5 ~~dlt~~~pRSp~~~lgG 22 (145)
T 3omd_A 5 GMDLTKQFPRSPVDRLGG 22 (145)
T ss_dssp CCCTTTSCCCCTTSCBTT
T ss_pred ccchhcCCCCCHHHHhCC
Confidence 467889999999886543
No 10
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=16.98 E-value=70 Score=19.70 Aligned_cols=10 Identities=30% Similarity=0.116 Sum_probs=4.2
Q ss_pred ccccccchhh
Q 036469 157 IPVSGEQLLF 166 (171)
Q Consensus 157 i~r~~~~~~~ 166 (171)
+.-|+++.+|
T Consensus 38 i~DrrE~~kF 47 (79)
T 2knc_B 38 IHDRKEFAKF 47 (79)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3334444444
Done!