BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036471
(516 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 122/205 (59%), Gaps = 9/205 (4%)
Query: 316 RRYSYADIKKMTNSFKYK--LGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEE--FINE 371
+R+S +++ +++F K LG+GG+G VYKG+L DG+ VAVK L + + G E F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 372 VASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQ 431
V IS H N++ L GFC R L+Y +++NGS+ + S L W +
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPES--QPPLDWPKRQR 143
Query: 432 IAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTG 491
IA+G ARGL YLH C +I+H D+K NILLDE+F + DFGLAK+ + K+ +
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX-XA 202
Query: 492 ARGTVGYIAPEVFCRNIGEVSYKSD 516
RGT+G+IAPE + G+ S K+D
Sbjct: 203 VRGTIGHIAPEYL--STGKSSEKTD 225
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 120/205 (58%), Gaps = 9/205 (4%)
Query: 316 RRYSYADIKKMTNSFKYK--LGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEE--FINE 371
+R+S +++ +++F K LG+GG+G VYKG+L DG VAVK L + + G E F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 372 VASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQ 431
V IS H N++ L GFC R L+Y +++NGS+ + S L W +
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPES--QPPLDWPKRQR 135
Query: 432 IAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTG 491
IA+G ARGL YLH C +I+H D+K NILLDE+F + DFGLAK+ + K+ +
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX-XA 194
Query: 492 ARGTVGYIAPEVFCRNIGEVSYKSD 516
RG +G+IAPE + G+ S K+D
Sbjct: 195 VRGXIGHIAPEYL--STGKSSEKTD 217
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 118/203 (58%), Gaps = 10/203 (4%)
Query: 317 RYSYADIKKMTNSFKYK--LGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVAS 374
R D+++ TN+F +K +G G +G VYKG L DG+ VA+K G E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 375 -ISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIA 433
+S H ++V+L+GFC E LIY+++ NG+L++ +Y S + ++WE L+I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY--GSDLPTMSMSWEQRLEIC 145
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 493
+G ARGL YLH + I+H D+K NILLDE+F PKI+DFG++K + +
Sbjct: 146 IGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVK 202
Query: 494 GTVGYIAPEVFCRNIGEVSYKSD 516
GT+GYI PE F + G ++ KSD
Sbjct: 203 GTLGYIDPEYFIK--GRLTEKSD 223
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 117/203 (57%), Gaps = 10/203 (4%)
Query: 317 RYSYADIKKMTNSFKYK--LGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVAS 374
R D+++ TN+F +K +G G +G VYKG L DG+ VA+K G E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 375 -ISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIA 433
+S H ++V+L+GFC E LIY+++ NG+L++ +Y S + ++WE L+I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY--GSDLPTMSMSWEQRLEIC 145
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 493
+G ARGL YLH + I+H D+K NILLDE+F PKI+DFG++K +
Sbjct: 146 IGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVK 202
Query: 494 GTVGYIAPEVFCRNIGEVSYKSD 516
GT+GYI PE F + G ++ KSD
Sbjct: 203 GTLGYIDPEYFIK--GRLTEKSD 223
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 114/212 (53%), Gaps = 23/212 (10%)
Query: 318 YSYADIKKMTNSFKY--------KLGQGGYGSVYKGKLIDGSNVAVKVLN-----DSKGN 364
+S+ ++K +TN+F K+G+GG+G VYKG ++ + VAVK L ++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 365 GEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKL 424
++F E+ +++ H N+V LLGF +G L+Y ++ NGSL + R S L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL---LDRLSCLDGTPPL 130
Query: 425 TWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE 484
+W +IA G A G+ +LH +H DIK NILLDE F KISDFGLA+ +
Sbjct: 131 SWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 485 SIISMTGARGTVGYIAPEVFCRNIGEVSYKSD 516
+ + GT Y+APE GE++ KSD
Sbjct: 188 QTVMXSRIVGTTAYMAPEALR---GEITPKSD 216
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 113/212 (53%), Gaps = 23/212 (10%)
Query: 318 YSYADIKKMTNSFKY--------KLGQGGYGSVYKGKLIDGSNVAVKVLN-----DSKGN 364
+S+ ++K +TN+F K+G+GG+G VYKG ++ + VAVK L ++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 365 GEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKL 424
++F E+ +++ H N+V LLGF +G L+Y ++ NGSL + R S L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL---LDRLSCLDGTPPL 130
Query: 425 TWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE 484
+W +IA G A G+ +LH +H DIK NILLDE F KISDFGLA+ +
Sbjct: 131 SWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 485 SIISMTGARGTVGYIAPEVFCRNIGEVSYKSD 516
+ GT Y+APE GE++ KSD
Sbjct: 188 QTVMXXRIVGTTAYMAPEALR---GEITPKSD 216
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 113/212 (53%), Gaps = 23/212 (10%)
Query: 318 YSYADIKKMTNSFKY--------KLGQGGYGSVYKGKLIDGSNVAVKVLN-----DSKGN 364
+S+ ++K +TN+F K+G+GG+G VYKG ++ + VAVK L ++
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 67
Query: 365 GEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKL 424
++F E+ +++ H N+V LLGF +G L+Y ++ NGSL + R S L
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL---LDRLSCLDGTPPL 124
Query: 425 TWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE 484
+W +IA G A G+ +LH +H DIK NILLDE F KISDFGLA+ +
Sbjct: 125 SWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 485 SIISMTGARGTVGYIAPEVFCRNIGEVSYKSD 516
+ GT Y+APE GE++ KSD
Sbjct: 182 QXVMXXRIVGTTAYMAPEALR---GEITPKSD 210
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 110/212 (51%), Gaps = 23/212 (10%)
Query: 318 YSYADIKKMTNSFKY--------KLGQGGYGSVYKGKLIDGSNVAVKVLN-----DSKGN 364
+S+ ++K +TN+F K G+GG+G VYKG ++ + VAVK L ++
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 64
Query: 365 GEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKL 424
++F E+ ++ H N+V LLGF +G L+Y + NGSL + R S L
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL---LDRLSCLDGTPPL 121
Query: 425 TWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE 484
+W +IA G A G+ +LH +H DIK NILLDE F KISDFGLA+ +
Sbjct: 122 SWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 485 SIISMTGARGTVGYIAPEVFCRNIGEVSYKSD 516
+ + GT Y APE GE++ KSD
Sbjct: 179 QXVXXSRIVGTTAYXAPEALR---GEITPKSD 207
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 105/179 (58%), Gaps = 10/179 (5%)
Query: 329 SFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGE---EFINEVASISRTSHVNVVT 385
+ K K+G G +G+V++ + GS+VAVK+L + + E EF+ EVA + R H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 386 LLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
+G + +++ E++S GSL + ++++ + +L L +A +A+G+ YLH
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA---REQLDERRRLSMAYDVAKGMNYLH- 154
Query: 446 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
+ I+H ++K N+L+D+ + K+ DFGL+++ + + +S A GT ++APEV
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVL 211
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 103/179 (57%), Gaps = 10/179 (5%)
Query: 329 SFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGE---EFINEVASISRTSHVNVVT 385
+ K K+G G +G+V++ + GS+VAVK+L + + E EF+ EVA + R H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 386 LLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
+G + +++ E++S GSL + ++++ + +L L +A +A+G+ YLH
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA---REQLDERRRLSMAYDVAKGMNYLH- 154
Query: 446 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
+ I+H D+K N+L+D+ + K+ DFGL+++ + + A GT ++APEV
Sbjct: 155 NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVL 211
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 104/188 (55%), Gaps = 15/188 (7%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLGF 389
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 19 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ + A++ ++ SL ++ + + E KL + IA ARG++YLH +
Sbjct: 77 STKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH---AK 127
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNI 508
I+H D+K +NI L ED KI DFGLA + +R G++ ++APEV ++
Sbjct: 128 SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 187
Query: 509 GEVSYKSD 516
S++SD
Sbjct: 188 NPYSFQSD 195
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 320 YADIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFI---NEVASIS 376
Y +I+ ++G G +G+VYKGK +VAVK+L E+F NEVA +
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKW--HGDVAVKILKVVDPTPEQFQAFRNEVAVLR 87
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
+T HVN++ +G+ + A++ ++ SL K ++ ++ K L+ IA
Sbjct: 88 KTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLH-----VQETKFQMFQLIDIARQT 141
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 496
A+G++YLH + I+H D+K +NI L E KI DFGLA + +R + G+V
Sbjct: 142 AQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSV 198
Query: 497 GYIAPEVF-CRNIGEVSYKSD 516
++APEV ++ S++SD
Sbjct: 199 LWMAPEVIRMQDNNPFSFQSD 219
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 102/188 (54%), Gaps = 15/188 (7%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLGF 389
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 15 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ A++ ++ SL Y + IE K L+ IA A+G++YLH +
Sbjct: 73 S-TAPQLAIVTQWCEGSSL----YHHLHIIET-KFEMIKLIDIARQTAQGMDYLH---AK 123
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNI 508
I+H D+K +NI L ED KI DFGLA + +R G++ ++APEV ++
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 509 GEVSYKSD 516
S++SD
Sbjct: 184 NPYSFQSD 191
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 102/188 (54%), Gaps = 15/188 (7%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLGF 389
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 31 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ A++ ++ SL ++ + + E KL + IA ARG++YLH +
Sbjct: 89 S-TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH---AK 139
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNI 508
I+H D+K +NI L ED KI DFGLA +R G++ ++APEV ++
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 509 GEVSYKSD 516
S++SD
Sbjct: 200 NPYSFQSD 207
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 103/188 (54%), Gaps = 15/188 (7%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLGF 389
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 31 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ + A++ ++ SL ++ + + E KL + IA ARG++YLH +
Sbjct: 89 STKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH---AK 139
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNI 508
I+H D+K +NI L ED KI DFGLA +R G++ ++APEV ++
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 509 GEVSYKSD 516
S++SD
Sbjct: 200 NPYSFQSD 207
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 103/188 (54%), Gaps = 15/188 (7%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLGF 389
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 15 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ + A++ ++ SL Y + IE K L+ IA A+G++YLH +
Sbjct: 73 STKPQL-AIVTQWCEGSSL----YHHLHIIET-KFEMIKLIDIARQTAQGMDYLH---AK 123
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNI 508
I+H D+K +NI L ED KI DFGLA + +R G++ ++APEV ++
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 509 GEVSYKSD 516
S++SD
Sbjct: 184 NPYSFQSD 191
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 103/188 (54%), Gaps = 15/188 (7%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLGF 389
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 17 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ + A++ ++ SL Y + IE K L+ IA A+G++YLH +
Sbjct: 75 STKPQL-AIVTQWCEGSSL----YHHLHIIET-KFEMIKLIDIARQTAQGMDYLH---AK 125
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNI 508
I+H D+K +NI L ED KI DFGLA + +R G++ ++APEV ++
Sbjct: 126 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 185
Query: 509 GEVSYKSD 516
S++SD
Sbjct: 186 NPYSFQSD 193
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 103/188 (54%), Gaps = 15/188 (7%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLGF 389
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 20 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ + A++ ++ SL Y + IE K L+ IA A+G++YLH +
Sbjct: 78 STKPQL-AIVTQWCEGSSL----YHHLHIIET-KFEMIKLIDIARQTAQGMDYLH---AK 128
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNI 508
I+H D+K +NI L ED KI DFGLA + +R G++ ++APEV ++
Sbjct: 129 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 509 GEVSYKSD 516
S++SD
Sbjct: 189 NPYSFQSD 196
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 103/188 (54%), Gaps = 15/188 (7%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLGF 389
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 20 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ + A++ ++ SL Y + IE K L+ IA A+G++YLH +
Sbjct: 78 STKPQL-AIVTQWCEGSSL----YHHLHIIET-KFEMIKLIDIARQTAQGMDYLH---AK 128
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNI 508
I+H D+K +NI L ED KI DFGLA + +R G++ ++APEV ++
Sbjct: 129 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 509 GEVSYKSD 516
S++SD
Sbjct: 189 NPYSFQSD 196
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 103/188 (54%), Gaps = 15/188 (7%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLGF 389
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 42 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ + A++ ++ SL Y + IE K L+ IA A+G++YLH +
Sbjct: 100 STKPQL-AIVTQWCEGSSL----YHHLHIIET-KFEMIKLIDIARQTAQGMDYLH---AK 150
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNI 508
I+H D+K +NI L ED KI DFGLA + +R G++ ++APEV ++
Sbjct: 151 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 210
Query: 509 GEVSYKSD 516
S++SD
Sbjct: 211 NPYSFQSD 218
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 103/188 (54%), Gaps = 15/188 (7%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLGF 389
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 43 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ + A++ ++ SL Y + IE K L+ IA A+G++YLH +
Sbjct: 101 STKPQL-AIVTQWCEGSSL----YHHLHIIET-KFEMIKLIDIARQTAQGMDYLH---AK 151
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNI 508
I+H D+K +NI L ED KI DFGLA + +R G++ ++APEV ++
Sbjct: 152 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 509 GEVSYKSD 516
S++SD
Sbjct: 212 NPYSFQSD 219
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 12/208 (5%)
Query: 311 GSLAPR-RYSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEF 368
G++ P Y ++++ + K+KLG G YG VY+G S VAVK L + EEF
Sbjct: 1 GAMDPSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 60
Query: 369 INEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWET 428
+ E A + H N+V LLG C +I EF++ G+L ++ R + E + +
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAV---V 116
Query: 429 LLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS 488
LL +A I+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ +
Sbjct: 117 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTA 172
Query: 489 MTGARGTVGYIAPEVFCRNIGEVSYKSD 516
GA+ + + APE N + S KSD
Sbjct: 173 HAGAKFPIKWTAPESLAYN--KFSIKSD 198
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 12/207 (5%)
Query: 311 GSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFI 369
G++ P Y ++++ + K+KLG G YG VY+G S VAVK L + EEF+
Sbjct: 1 GAMDPN-YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 59
Query: 370 NEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETL 429
E A + H N+V LLG C +I EF++ G+L ++ R + E + + L
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAV---VL 115
Query: 430 LQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM 489
L +A I+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ +
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAH 171
Query: 490 TGARGTVGYIAPEVFCRNIGEVSYKSD 516
GA+ + + APE N + S KSD
Sbjct: 172 AGAKFPIKWTAPESLAYN--KFSIKSD 196
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 12/207 (5%)
Query: 311 GSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFI 369
G ++P Y ++++ + K+KLG G YG VY+G S VAVK L + EEF+
Sbjct: 1 GHMSPN-YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 59
Query: 370 NEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETL 429
E A + H N+V LLG C +I EF++ G+L ++ R + E + + L
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAV---VL 115
Query: 430 LQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM 489
L +A I+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ +
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAH 171
Query: 490 TGARGTVGYIAPEVFCRNIGEVSYKSD 516
GA+ + + APE N + S KSD
Sbjct: 172 AGAKFPIKWTAPESLAYN--KFSIKSD 196
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 12/207 (5%)
Query: 311 GSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFI 369
G ++P Y ++++ + K+KLG G YG VY+G S VAVK L + EEF+
Sbjct: 1 GHMSPN-YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 59
Query: 370 NEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETL 429
E A + H N+V LLG C +I EF++ G+L ++ R + E + + L
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAV---VL 115
Query: 430 LQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM 489
L +A I+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ +
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAP 171
Query: 490 TGARGTVGYIAPEVFCRNIGEVSYKSD 516
GA+ + + APE N + S KSD
Sbjct: 172 AGAKFPIKWTAPESLAYN--KFSIKSD 196
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 13/209 (6%)
Query: 311 GSLAPR--RYSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEE 367
G++ P Y ++++ + K+KLG G YG VY+G S VAVK L + EE
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 60
Query: 368 FINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWE 427
F+ E A + H N+V LLG C +I EF++ G+L ++ R + E + +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAV--- 116
Query: 428 TLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 487
LL +A I+ +EYL +H D+ N L+ E+ K++DFGL+++ ++
Sbjct: 117 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXT 172
Query: 488 SMTGARGTVGYIAPEVFCRNIGEVSYKSD 516
+ GA+ + + APE N + S KSD
Sbjct: 173 AHAGAKFPIKWTAPESLAYN--KFSIKSD 199
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 313 LAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEV 372
L PR + I +F ++G G +G V+ G ++ VA+K + + + ++FI E
Sbjct: 14 LVPRGSLHMVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEA 73
Query: 373 ASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQI 432
+ + SH +V L G C E L++EF+ +G L ++ + ETLL +
Sbjct: 74 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGM 128
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
+ + G+ YL C ++H D+ N L+ E+ K+SDFG+ + + S TG
Sbjct: 129 CLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGT 184
Query: 493 RGTVGYIAPEVFCRNIGEVSYKSD 516
+ V + +PEVF + S KSD
Sbjct: 185 KFPVKWASPEVF--SFSRYSSKSD 206
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 318 YSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFINEVASIS 376
Y ++++ + K+KLG G YG VY+G S VAVK L + EEF+ E A +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
H N+V LLG C +I EF++ G+L ++ R + E + + LL +A I
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAV---VLLYMATQI 125
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 496
+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 181
Query: 497 GYIAPEVFCRNIGEVSYKSD 516
+ APE N + S KSD
Sbjct: 182 KWTAPESLAYN--KFSIKSD 199
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 318 YSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFINEVASIS 376
Y ++++ + K+KLG G YG VY+G S VAVK L + EEF+ E A +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
H N+V LLG C +I EF++ G+L ++ R + E + + LL +A I
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAV---VLLYMATQI 125
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 496
+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 181
Query: 497 GYIAPEVFCRNIGEVSYKSD 516
+ APE N + S KSD
Sbjct: 182 KWTAPESLAYN--KFSIKSD 199
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 318 YSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFINEVASIS 376
Y ++++ + K+KLG G YG VY+G S VAVK L + EEF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
H N+V LLG C +I EF++ G+L ++ R + E + + LL +A I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAV---VLLYMATQI 120
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 496
+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 176
Query: 497 GYIAPEVFCRNIGEVSYKSD 516
+ APE N + S KSD
Sbjct: 177 KWTAPESLAYN--KFSIKSD 194
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 318 YSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFINEVASIS 376
Y ++++ + K+KLG G YG VY+G S VAVK L + EEF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
H N+V LLG C +I EF++ G+L ++ R + E + + LL +A I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAV---VLLYMATQI 120
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 496
+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 176
Query: 497 GYIAPEVFCRNIGEVSYKSD 516
+ APE N + S KSD
Sbjct: 177 KWTAPESLAYN--KFSIKSD 194
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 102/188 (54%), Gaps = 15/188 (7%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLGF 389
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 15 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ + A++ ++ SL Y + IE K L+ IA A+G++YLH +
Sbjct: 73 STKPQL-AIVTQWCEGSSL----YHHLHIIET-KFEMIKLIDIARQTAQGMDYLH---AK 123
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNI 508
I+H D+K +NI L ED KI DFGLA +R G++ ++APEV ++
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 509 GEVSYKSD 516
S++SD
Sbjct: 184 NPYSFQSD 191
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 311 GSLAPRR--YSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEE 367
G++ P Y ++++ + K+KLG G YG VY+G S VAVK L + EE
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 60
Query: 368 FINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWE 427
F+ E A + H N+V LLG C +I EF++ G+L ++ +++
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAV 116
Query: 428 TLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 487
LL +A I+ +EYL +H D+ N L+ E+ K++DFGL+++ ++
Sbjct: 117 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYT 172
Query: 488 SMTGARGTVGYIAPEVFCRNIGEVSYKSD 516
+ GA+ + + APE N + S KSD
Sbjct: 173 AHAGAKFPIKWTAPESLAYN--KFSIKSD 199
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 13/209 (6%)
Query: 311 GSLAPRR--YSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEE 367
G++ P Y ++++ + K+KLG G YG VY+G S VAVK L + EE
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 60
Query: 368 FINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWE 427
F+ E A + H N+V LLG C +I EF++ G+L ++ R + E + +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAV--- 116
Query: 428 TLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 487
LL +A I+ +EYL +H D+ N L+ E+ K++DFGL+++ ++
Sbjct: 117 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYT 172
Query: 488 SMTGARGTVGYIAPEVFCRNIGEVSYKSD 516
+ GA+ + + APE N + S KSD
Sbjct: 173 AHAGAKFPIKWTAPESLAYN--KFSIKSD 199
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 318 YSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFINEVASIS 376
Y ++++ + K+KLG G YG VY+G S VAVK L + EEF+ E A +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 65
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
H N+V LLG C +I EF++ G+L ++ R + E + + LL +A I
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAV---VLLYMATQI 121
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 496
+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 122 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPI 177
Query: 497 GYIAPEVFCRNIGEVSYKSD 516
+ APE N + S KSD
Sbjct: 178 KWTAPESLAYN--KFSIKSD 195
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 102/188 (54%), Gaps = 15/188 (7%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLGF 389
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 35 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ + A++ ++ SL Y + IE K L+ IA A+G++YLH +
Sbjct: 93 STKPQL-AIVTQWCEGSSL----YHHLHIIET-KFEMIKLIDIARQTAQGMDYLH---AK 143
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNI 508
I+H D+K +NI L ED KI DFGLA +R G++ ++APEV ++
Sbjct: 144 SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 203
Query: 509 GEVSYKSD 516
S++SD
Sbjct: 204 NPYSFQSD 211
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 102/188 (54%), Gaps = 15/188 (7%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLGF 389
++G G +G+VYKGK +VAVK+LN + ++ F NEV + +T HVN++ +G+
Sbjct: 43 RIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ + A++ ++ SL Y + IE K L+ IA A+G++YLH +
Sbjct: 101 STKPQL-AIVTQWCEGSSL----YHHLHIIET-KFEMIKLIDIARQTAQGMDYLH---AK 151
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF-CRNI 508
I+H D+K +NI L ED KI DFGLA +R G++ ++APEV ++
Sbjct: 152 SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 509 GEVSYKSD 516
S++SD
Sbjct: 212 NPYSFQSD 219
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 11/188 (5%)
Query: 329 SFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
+F ++G G +G V+ G ++ VA+K + + + E+FI E + + SH +V L G
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
C E L++EF+ +G L ++ + ETLL + + + G+ YL C
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC- 121
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
++H D+ N L+ E+ K+SDFG+ + + S TG + V + +PEVF +
Sbjct: 122 --VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SF 176
Query: 509 GEVSYKSD 516
S KSD
Sbjct: 177 SRYSSKSD 184
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 318 YSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFINEVASIS 376
Y ++++ + K+KLG G YG VY+G S VAVK L + EEF+ E A +
Sbjct: 18 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 77
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
H N+V LLG C +I EF++ G+L ++ R + E + + LL +A I
Sbjct: 78 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAV---VLLYMATQI 133
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 496
+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 134 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 189
Query: 497 GYIAPEVFCRNIGEVSYKSD 516
+ APE N + S KSD
Sbjct: 190 KWTAPESLAYN--KFSIKSD 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 318 YSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFINEVASIS 376
Y ++++ + K+KLG G YG VY+G S VAVK L + EEF+ E A +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 65
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
H N+V LLG C +I EF++ G+L ++ R + E + + LL +A I
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAV---VLLYMATQI 121
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 496
+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 122 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPI 177
Query: 497 GYIAPEVFCRNIGEVSYKSD 516
+ APE N + S KSD
Sbjct: 178 KWTAPESLAYN--KFSIKSD 195
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 330 FKYKLGQGGYGSVYKGKLID--GSNV--AVKVLNDSKGNGE--EFINEVASISRTSHVNV 383
F +G+G +G VY G L+D G + AVK LN GE +F+ E + SH NV
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 384 VTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEY 442
++LLG C L+ ++ +G L FI RN E H T + L+ + +A+G++Y
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RN----ETHNPTVKDLIGFGLQVAKGMKY 167
Query: 443 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIA 500
L S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A
Sbjct: 168 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 501 PE 502
E
Sbjct: 225 LE 226
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 318 YSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFINEVASIS 376
Y ++++ + K+KLG G YG VY+G S VAVK L + EEF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
H N+V LLG C +I EF++ G+L ++ +++ LL +A I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQI 120
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 496
+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 176
Query: 497 GYIAPEVFCRNIGEVSYKSD 516
+ APE N + S KSD
Sbjct: 177 KWTAPESLAYN--KFSIKSD 194
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 330 FKYKLGQGGYGSVYKGKLID--GSNV--AVKVLNDSKGNGE--EFINEVASISRTSHVNV 383
F +G+G +G VY G L+D G + AVK LN GE +F+ E + SH NV
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 384 VTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEY 442
++LLG C L+ ++ +G L FI RN E H T + L+ + +A+G++Y
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RN----ETHNPTVKDLIGFGLQVAKGMKY 147
Query: 443 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIA 500
L S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 501 PE 502
E
Sbjct: 205 LE 206
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 330 FKYKLGQGGYGSVYKGKLID--GSNV--AVKVLNDSKGNGE--EFINEVASISRTSHVNV 383
F +G+G +G VY G L+D G + AVK LN GE +F+ E + SH NV
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 384 VTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEY 442
++LLG C L+ ++ +G L FI RN E H T + L+ + +A+G++Y
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RN----ETHNPTVKDLIGFGLQVAKGMKY 148
Query: 443 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIA 500
L S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 501 PE 502
E
Sbjct: 206 LE 207
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 330 FKYKLGQGGYGSVYKGKLID--GSNV--AVKVLNDSKGNGE--EFINEVASISRTSHVNV 383
F +G+G +G VY G L+D G + AVK LN GE +F+ E + SH NV
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 384 VTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEY 442
++LLG C L+ ++ +G L FI RN E H T + L+ + +A+G++Y
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RN----ETHNPTVKDLIGFGLQVAKGMKY 148
Query: 443 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIA 500
L S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 501 PE 502
E
Sbjct: 206 LE 207
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 330 FKYKLGQGGYGSVYKGKLID--GSNV--AVKVLNDSKGNGE--EFINEVASISRTSHVNV 383
F +G+G +G VY G L+D G + AVK LN GE +F+ E + SH NV
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 384 VTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEY 442
++LLG C L+ ++ +G L FI RN E H T + L+ + +A+G++Y
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RN----ETHNPTVKDLIGFGLQVAKGMKY 140
Query: 443 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIA 500
L S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 501 PE 502
E
Sbjct: 198 LE 199
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 330 FKYKLGQGGYGSVYKGKLID--GSNV--AVKVLNDSKGNGE--EFINEVASISRTSHVNV 383
F +G+G +G VY G L+D G + AVK LN GE +F+ E + SH NV
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 384 VTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEY 442
++LLG C L+ ++ +G L FI RN E H T + L+ + +A+G++Y
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RN----ETHNPTVKDLIGFGLQVAKGMKY 147
Query: 443 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIA 500
L S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 501 PE 502
E
Sbjct: 205 LE 206
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 330 FKYKLGQGGYGSVYKGKLID--GSNV--AVKVLNDSKGNGE--EFINEVASISRTSHVNV 383
F +G+G +G VY G L+D G + AVK LN GE +F+ E + SH NV
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 384 VTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEY 442
++LLG C L+ ++ +G L FI RN E H T + L+ + +A+G++Y
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RN----ETHNPTVKDLIGFGLQVAKGMKY 145
Query: 443 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIA 500
L S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 501 PE 502
E
Sbjct: 203 LE 204
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 330 FKYKLGQGGYGSVYKGKLID--GSNV--AVKVLNDSKGNGE--EFINEVASISRTSHVNV 383
F +G+G +G VY G L+D G + AVK LN GE +F+ E + SH NV
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 384 VTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEY 442
++LLG C L+ ++ +G L FI RN E H T + L+ + +A+G++Y
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RN----ETHNPTVKDLIGFGLQVAKGMKY 166
Query: 443 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIA 500
L S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 501 PE 502
E
Sbjct: 224 LE 225
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 318 YSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFINEVASIS 376
Y ++++ + K+KLG G YG VY+G S VAVK L + EEF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
H N+V LLG C +I EF++ G+L ++ +++ LL +A I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQI 120
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 496
+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 176
Query: 497 GYIAPEVFCRNIGEVSYKSD 516
+ APE N + S KSD
Sbjct: 177 KWTAPESLAYN--KFSIKSD 194
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 330 FKYKLGQGGYGSVYKGKLID--GSNV--AVKVLNDSKGNGE--EFINEVASISRTSHVNV 383
F +G+G +G VY G L+D G + AVK LN GE +F+ E + SH NV
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 384 VTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEY 442
++LLG C L+ ++ +G L FI RN E H T + L+ + +A+G++Y
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RN----ETHNPTVKDLIGFGLQVAKGMKY 146
Query: 443 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIA 500
L S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 501 PE 502
E
Sbjct: 204 LE 205
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 330 FKYKLGQGGYGSVYKGKLID--GSNV--AVKVLNDSKGNGE--EFINEVASISRTSHVNV 383
F +G+G +G VY G L+D G + AVK LN GE +F+ E + SH NV
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 384 VTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEY 442
++LLG C L+ ++ +G L FI RN E H T + L+ + +A+G++Y
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RN----ETHNPTVKDLIGFGLQVAKGMKY 143
Query: 443 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIA 500
L S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 501 PE 502
E
Sbjct: 201 LE 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 11/188 (5%)
Query: 329 SFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
+F ++G G +G V+ G ++ VA+K + + + E+FI E + + SH +V L G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
C E L++EF+ +G L ++ + ETLL + + + G+ YL C
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC- 123
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
++H D+ N L+ E+ K+SDFG+ + + S TG + V + +PEVF +
Sbjct: 124 --VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SF 178
Query: 509 GEVSYKSD 516
S KSD
Sbjct: 179 SRYSSKSD 186
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 11/188 (5%)
Query: 329 SFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
+F ++G G +G V+ G ++ VA+K + + + E+FI E + + SH +V L G
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
C E L++EF+ +G L ++ + ETLL + + + G+ YL C
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC- 126
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
++H D+ N L+ E+ K+SDFG+ + + S TG + V + +PEVF +
Sbjct: 127 --VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SF 181
Query: 509 GEVSYKSD 516
S KSD
Sbjct: 182 SRYSSKSD 189
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 318 YSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFINEVASIS 376
Y ++++ + K+KLG G YG VY+G S VAVK L + EEF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
H N+V LLG C +I EF++ G+L ++ +++ LL +A I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQI 120
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 496
+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 176
Query: 497 GYIAPEVFCRNIGEVSYKSD 516
+ APE N + S KSD
Sbjct: 177 KWTAPESLAYN--KFSIKSD 194
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 318 YSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFINEVASIS 376
Y ++++ + K+KLG G YG VY+G S VAVK L + EEF+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
H N+V LLG C +I EF++ G+L ++ +++ LL +A I
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQI 120
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 496
+ +EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 176
Query: 497 GYIAPEVFCRNIGEVSYKSD 516
+ APE N + S KSD
Sbjct: 177 KWTAPESLAYN--KFSIKSD 194
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFINEVASISRTSH 380
++++ + K+KLG G YG VY+G S VAVK L + EEF+ E A + H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 381 VNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
N+V LLG C +I EF++ G+L ++ +++ LL +A I+ +
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQISSAM 122
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 500
EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ + + A
Sbjct: 123 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTA 178
Query: 501 PEVFCRNIGEVSYKSD 516
PE N + S KSD
Sbjct: 179 PESLAYN--KFSIKSD 192
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 27/202 (13%)
Query: 329 SFKYKLGQGGYGSVYKGKLI-DGSNVAVK--VLNDSKGNGE------EFINEVASISRTS 379
++ ++G+GG+G V+KG+L+ D S VA+K +L DS+G E EF EV +S +
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
H N+V L G R ++ EFV G L + + H + W L++ + IA G
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA-----HPIKWSVKLRLMLDIALG 134
Query: 440 LEYLHLGCSTRILHFDIKPHNIL---LDED--FCPKISDFGLAKICNRKESIISMTGARG 494
+EY+ + I+H D++ NI LDE+ C K++DFGL+ ++S+ S++G G
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS-----QQSVHSVSGLLG 188
Query: 495 TVGYIAPEVFCRNIGEVSYKSD 516
++APE + K+D
Sbjct: 189 NFQWMAPETIGAEEESYTEKAD 210
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFINEVASISRTSH 380
++++ + K+KLG G YG VY+G S VAVK L + EEF+ E A + H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 381 VNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
N+V LLG C +I EF++ G+L ++ +++ LL +A I+ +
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQISSAM 122
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 500
EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ + + A
Sbjct: 123 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTA 178
Query: 501 PEVFCRNIGEVSYKSD 516
PE N + S KSD
Sbjct: 179 PESLAYN--KFSIKSD 192
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 330 FKYKLGQGGYGSVYKGKLID--GSNV--AVKVLNDSKGNGE--EFINEVASISRTSHVNV 383
F +G+G +G VY G L+D G + AVK LN GE +F+ E + SH NV
Sbjct: 39 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 384 VTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEY 442
++LLG C L+ ++ +G L FI RN E H T + L+ + +A+G+++
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RN----ETHNPTVKDLIGFGLQVAKGMKF 153
Query: 443 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIA 500
L S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 501 PE 502
E
Sbjct: 211 LE 212
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 330 FKYKLGQGGYGSVYKGKLID--GSNV--AVKVLNDSKGNGE--EFINEVASISRTSHVNV 383
F +G+G +G VY G L+D G + AVK LN GE +F+ E + SH NV
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 384 VTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEY 442
++LLG C L+ ++ +G L FI RN E H T + L+ + +A+G+++
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RN----ETHNPTVKDLIGFGLQVAKGMKF 146
Query: 443 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIA 500
L S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 501 PE 502
E
Sbjct: 204 LE 205
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 330 FKYKLGQGGYGSVYKGKLID--GSNV--AVKVLNDSKGNGE--EFINEVASISRTSHVNV 383
F +G+G +G VY G L+D G + AVK LN GE +F+ E + SH NV
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 384 VTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEY 442
++LLG C L+ ++ +G L FI RN E H T + L+ + +A+G+++
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RN----ETHNPTVKDLIGFGLQVAKGMKF 149
Query: 443 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIA 500
L S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 501 PE 502
E
Sbjct: 207 LE 208
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 330 FKYKLGQGGYGSVYKGKLID--GSNV--AVKVLNDSKGNGE--EFINEVASISRTSHVNV 383
F +G+G +G VY G L+D G + AVK LN GE +F+ E + SH NV
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 384 VTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEY 442
++LLG C L+ ++ +G L FI RN E H T + L+ + +A+G+++
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RN----ETHNPTVKDLIGFGLQVAKGMKF 148
Query: 443 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIA 500
L S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 501 PE 502
E
Sbjct: 206 LE 207
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 330 FKYKLGQGGYGSVYKGKLID--GSNV--AVKVLNDSKGNGE--EFINEVASISRTSHVNV 383
F +G+G +G VY G L+D G + AVK LN GE +F+ E + SH NV
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 384 VTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEY 442
++LLG C L+ ++ +G L FI RN E H T + L+ + +A+G+++
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RN----ETHNPTVKDLIGFGLQVAKGMKF 148
Query: 443 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIA 500
L S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 501 PE 502
E
Sbjct: 206 LE 207
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 11/188 (5%)
Query: 329 SFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
+F ++G G +G V+ G ++ VA+K + + + E+FI E + + SH +V L G
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
C E L+ EF+ +G L ++ + ETLL + + + G+ YL C
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYLEEAC- 124
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
++H D+ N L+ E+ K+SDFG+ + + S TG + V + +PEVF +
Sbjct: 125 --VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SF 179
Query: 509 GEVSYKSD 516
S KSD
Sbjct: 180 SRYSSKSD 187
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 330 FKYKLGQGGYGSVYKGKLID--GSNV--AVKVLNDSKGNGE--EFINEVASISRTSHVNV 383
F +G+G +G VY G L+D G + AVK LN GE +F+ E + SH NV
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 384 VTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEY 442
++LLG C L+ ++ +G L FI RN E H T + L+ + +A+G+++
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RN----ETHNPTVKDLIGFGLQVAKGMKF 207
Query: 443 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIA 500
L S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A
Sbjct: 208 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 501 PE 502
E
Sbjct: 265 LE 266
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 9/185 (4%)
Query: 320 YADIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTS 379
+ ++K+ + +LG G +G V GK +VAVK++ + + +EF E ++ + S
Sbjct: 2 HMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLS 61
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
H +V G C + ++ E++SNG L ++ + +E + LL++ + G
Sbjct: 62 HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQ-----LLEMCYDVCEG 116
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYI 499
+ +L S + +H D+ N L+D D C K+SDFG+ + + +S G + V +
Sbjct: 117 MAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV-LDDQYVSSVGTKFPVKWS 172
Query: 500 APEVF 504
APEVF
Sbjct: 173 APEVF 177
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 330 FKYKLGQGGYGSVYKGKLID--GSNV--AVKVLNDSKGNGE--EFINEVASISRTSHVNV 383
F +G+G +G VY G L+D G + AVK LN GE +F+ E + SH NV
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 384 VTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEY 442
++LLG C L+ ++ +G L FI RN E H T + L+ + +A+G+++
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI-RN----ETHNPTVKDLIGFGLQVAKGMKF 149
Query: 443 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIA 500
L S + +H D+ N +LDE F K++DFGLA+ KE S+ + TGA+ V ++A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 501 PE 502
E
Sbjct: 207 LE 208
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 318 YSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFINEVASIS 376
Y ++++ + K+KLG G YG VY+G S VAVK L + EEF+ E A +
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 271
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
H N+V LLG C +I EF++ G+L ++ +++ LL +A I
Sbjct: 272 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQI 327
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 496
+ +EYL +H ++ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 328 SSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 383
Query: 497 GYIAPEVFCRNIGEVSYKSD 516
+ APE N + S KSD
Sbjct: 384 KWTAPESLAYN--KFSIKSD 401
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 318 YSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFINEVASIS 376
Y ++++ + K+KLG G YG VY+G S VAVK L + EEF+ E A +
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 310
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
H N+V LLG C +I EF++ G+L ++ R + E + + LL +A I
Sbjct: 311 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAV---VLLYMATQI 366
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 496
+ +EYL +H ++ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 367 SSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 422
Query: 497 GYIAPEVFCRNIGEVSYKSD 516
+ APE N + S KSD
Sbjct: 423 KWTAPESLAYN--KFSIKSD 440
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFINEVASISRTSH 380
++++ + K+KLG G +G VY+G S VAVK L + EEF+ E A + H
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 381 VNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
N+V LLG C +I EF++ G+L ++ +++ LL +A I+ +
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQISSAM 122
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 500
EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ + + A
Sbjct: 123 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTA 178
Query: 501 PEVFCRNIGEVSYKSD 516
PE N + S KSD
Sbjct: 179 PESLAYN--KFSIKSD 192
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 318 YSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFINEVASIS 376
Y ++++ + K+KLG G YG VY+G S VAVK L + EEF+ E A +
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 268
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
H N+V LLG C +I EF++ G+L ++ R + E + + LL +A I
Sbjct: 269 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAV---VLLYMATQI 324
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 496
+ +EYL +H ++ N L+ E+ K++DFGL+++ ++ + GA+ +
Sbjct: 325 SSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 380
Query: 497 GYIAPEVFCRNIGEVSYKSD 516
+ APE N + S KSD
Sbjct: 381 KWTAPESLAYN--KFSIKSD 398
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 11/188 (5%)
Query: 329 SFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
+F ++G G +G V+ G ++ VA+K + + + E+FI E + + SH +V L G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
C E L++EF+ +G L ++ + ETLL + + + G+ YL
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMAYLE---E 121
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
++H D+ N L+ E+ K+SDFG+ + + S TG + V + +PEVF +
Sbjct: 122 ASVIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SF 178
Query: 509 GEVSYKSD 516
S KSD
Sbjct: 179 SRYSSKSD 186
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 27/202 (13%)
Query: 329 SFKYKLGQGGYGSVYKGKLI-DGSNVAVK--VLNDSKGNGE------EFINEVASISRTS 379
++ ++G+GG+G V+KG+L+ D S VA+K +L DS+G E EF EV +S +
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
H N+V L G R ++ EFV G L + + H + W L++ + IA G
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA-----HPIKWSVKLRLMLDIALG 134
Query: 440 LEYLHLGCSTRILHFDIKPHNIL---LDED--FCPKISDFGLAKICNRKESIISMTGARG 494
+EY+ + I+H D++ NI LDE+ C K++DFG + ++S+ S++G G
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS-----QQSVHSVSGLLG 188
Query: 495 TVGYIAPEVFCRNIGEVSYKSD 516
++APE + K+D
Sbjct: 189 NFQWMAPETIGAEEESYTEKAD 210
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 27/202 (13%)
Query: 329 SFKYKLGQGGYGSVYKGKLI-DGSNVAVK--VLNDSKGNGE------EFINEVASISRTS 379
++ ++G+GG+G V+KG+L+ D S VA+K +L DS+G E EF EV +S +
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
H N+V L G R ++ EFV G L + + H + W L++ + IA G
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA-----HPIKWSVKLRLMLDIALG 134
Query: 440 LEYLHLGCSTRILHFDIKPHNIL---LDED--FCPKISDFGLAKICNRKESIISMTGARG 494
+EY+ + I+H D++ NI LDE+ C K++DF L+ ++S+ S++G G
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS-----QQSVHSVSGLLG 188
Query: 495 TVGYIAPEVFCRNIGEVSYKSD 516
++APE + K+D
Sbjct: 189 NFQWMAPETIGAEEESYTEKAD 210
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLNDSKGNGEEFINEVASISRTSH 380
++++ + K+KLG G YG VY G S VAVK L + EEF+ E A + H
Sbjct: 28 EMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 87
Query: 381 VNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
N+V LLG C ++ E++ G+L ++ ++T LL +A I+ +
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL----RECNREEVTAVVLLYMATQISSAM 143
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 500
EYL +H D+ N L+ E+ K++DFGL+++ ++ + GA+ + + A
Sbjct: 144 EYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTA 199
Query: 501 PEVFCRNIGEVSYKSD 516
PE N S KSD
Sbjct: 200 PESLAYNT--FSIKSD 213
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
Query: 308 RNHGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEE 367
+N S A Y +I +F +LG G +G V GK +VA+K++ + + +E
Sbjct: 6 KNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE 65
Query: 368 FINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWE 427
FI E + SH +V L G C + R +I E+++NG L ++ H+ +
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQ 120
Query: 428 TLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 487
LL++ + +EYL S + LH D+ N L+++ K+SDFGL++ E
Sbjct: 121 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE-T 176
Query: 488 SMTGARGTVGYIAPEVFCRNIGEVSYKSD 516
S G++ V + PEV + + S KSD
Sbjct: 177 SSVGSKFPVRWSPPEVLMYS--KFSSKSD 203
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
Query: 308 RNHGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEE 367
+N S A Y +I +F +LG G +G V GK +VA+K++ + + +E
Sbjct: 6 KNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE 65
Query: 368 FINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWE 427
FI E + SH +V L G C + R +I E+++NG L ++ H+ +
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQ 120
Query: 428 TLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 487
LL++ + +EYL S + LH D+ N L+++ K+SDFGL++ E
Sbjct: 121 QLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YT 176
Query: 488 SMTGARGTVGYIAPEVFCRNIGEVSYKSD 516
S G++ V + PEV + + S KSD
Sbjct: 177 SSVGSKFPVRWSPPEVLMYS--KFSSKSD 203
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 24/192 (12%)
Query: 334 LGQGGYGSVY--------KGKLIDGSNVAVKVLND--SKGNGEEFINEVASISRT-SHVN 382
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFI-YRNSSSIE---------NHKLTWETLLQI 432
++TLLG C + +I E+ S G+L +++ R +E ++T++ L+
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
+ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 493 RGTVGYIAPEVF 504
R V ++APE
Sbjct: 220 RLPVKWMAPEAL 231
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 99/184 (53%), Gaps = 19/184 (10%)
Query: 333 KLGQGGYGSVYKG---KLIDG---SNVAVKVLNDSKGNGE--EFINEVASISRTSHVNVV 384
+LGQG +G VY+G +I G + VAVK +N+S E EF+NE + + + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 385 TLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENH----KLTWETLLQIAVGIARGL 440
LLG +G+ ++ E +++G L+ ++ EN+ T + ++Q+A IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 498
YL+ + + +H D+ N ++ DF KI DFG+ + + E+ G +G V +
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRW 198
Query: 499 IAPE 502
+APE
Sbjct: 199 MAPE 202
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 99/184 (53%), Gaps = 19/184 (10%)
Query: 333 KLGQGGYGSVYKG---KLIDG---SNVAVKVLNDSKGNGE--EFINEVASISRTSHVNVV 384
+LGQG +G VY+G +I G + VAVK +N+S E EF+NE + + + +VV
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 385 TLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENH----KLTWETLLQIAVGIARGL 440
LLG +G+ ++ E +++G L+ ++ EN+ T + ++Q+A IA G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 498
YL+ + + +H D+ N ++ DF KI DFG+ + + E+ G +G V +
Sbjct: 141 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRW 195
Query: 499 IAPE 502
+APE
Sbjct: 196 MAPE 199
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 99/184 (53%), Gaps = 19/184 (10%)
Query: 333 KLGQGGYGSVYKG---KLIDG---SNVAVKVLNDSKGNGE--EFINEVASISRTSHVNVV 384
+LGQG +G VY+G +I G + VAVK +N+S E EF+NE + + + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 385 TLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENH----KLTWETLLQIAVGIARGL 440
LLG +G+ ++ E +++G L+ ++ EN+ T + ++Q+A IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 498
YL+ + + +H D+ N ++ DF KI DFG+ + + E+ G +G V +
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXRKGGKGLLPVRW 198
Query: 499 IAPE 502
+APE
Sbjct: 199 MAPE 202
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 11/188 (5%)
Query: 329 SFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
+F +LG G +G V GK +VA+K++ + + +EFI E + SH +V L G
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
C + R +I E+++NG L ++ H+ + LL++ + +EYL S
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQLLEMCKDVCEAMEYLE---S 118
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
+ LH D+ N L+++ K+SDFGL++ E S G++ V + PEV +
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS- 176
Query: 509 GEVSYKSD 516
+ S KSD
Sbjct: 177 -KFSSKSD 183
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 102/190 (53%), Gaps = 18/190 (9%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLNDSKGNGE--EFINEVASISRTSHVNVVTL 386
LG G +G+VYKG + +G V A+K+LN++ G EF++E ++ H ++V L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + L+ + + +G L ++++ + +I + + LL V IA+G+ YL
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGS-----QLLLNWCVQIAKGMMYLE-- 134
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLA++ E + G + + ++A E C
Sbjct: 135 -ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE--CI 191
Query: 507 NIGEVSYKSD 516
+ + +++SD
Sbjct: 192 HYRKFTHQSD 201
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 11/188 (5%)
Query: 329 SFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
+F +LG G +G V GK +VA+K++ + + +EFI E + SH +V L G
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 70
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
C + R +I E+++NG L ++ H+ + LL++ + +EYL S
Sbjct: 71 VCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQLLEMCKDVCEAMEYLE---S 122
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
+ LH D+ N L+++ K+SDFGL++ E S G++ V + PEV +
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS- 180
Query: 509 GEVSYKSD 516
+ S KSD
Sbjct: 181 -KFSSKSD 187
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 24/192 (12%)
Query: 334 LGQGGYGSVY--------KGKLIDGSNVAVKVLND--SKGNGEEFINEVASISRT-SHVN 382
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFI-YRNSSSIE---------NHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ R +E ++T++ L+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
+ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 493 RGTVGYIAPEVF 504
R V ++APE
Sbjct: 220 RLPVKWMAPEAL 231
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 24/192 (12%)
Query: 334 LGQGGYGSVY--------KGKLIDGSNVAVKVLND--SKGNGEEFINEVASISRT-SHVN 382
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFI-YRNSSSIE---------NHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ R +E ++T++ L+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
+ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 493 RGTVGYIAPEVF 504
R V ++APE
Sbjct: 220 RLPVKWMAPEAL 231
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 99/184 (53%), Gaps = 19/184 (10%)
Query: 333 KLGQGGYGSVYKG---KLIDG---SNVAVKVLNDSKGNGE--EFINEVASISRTSHVNVV 384
+LGQG +G VY+G +I G + VAVK +N+S E EF+NE + + + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 385 TLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENH----KLTWETLLQIAVGIARGL 440
LLG +G+ ++ E +++G L+ ++ EN+ T + ++Q+A IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 498
YL+ + + +H D+ N ++ DF KI DFG+ + + E+ G +G V +
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETAYYRKGGKGLLPVRW 198
Query: 499 IAPE 502
+APE
Sbjct: 199 MAPE 202
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 11/188 (5%)
Query: 329 SFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
+F +LG G +G V GK +VA+K++ + + +EFI E + SH +V L G
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
C + R +I E+++NG L ++ H+ + LL++ + +EYL S
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQLLEMCKDVCEAMEYLE---S 123
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
+ LH D+ N L+++ K+SDFGL++ E S G++ V + PEV +
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS- 181
Query: 509 GEVSYKSD 516
+ S KSD
Sbjct: 182 -KFSSKSD 188
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 11/199 (5%)
Query: 318 YSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISR 377
Y +I +F +LG G +G V GK +VA+K++ + + +EFI E +
Sbjct: 7 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMN 66
Query: 378 TSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIA 437
SH +V L G C + R +I E+++NG L ++ H+ + LL++ +
Sbjct: 67 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQLLEMCKDVC 121
Query: 438 RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVG 497
+EYL S + LH D+ N L+++ K+SDFGL++ E S G++ V
Sbjct: 122 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVR 177
Query: 498 YIAPEVFCRNIGEVSYKSD 516
+ PEV + + S KSD
Sbjct: 178 WSPPEVLMYS--KFSSKSD 194
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 102/190 (53%), Gaps = 18/190 (9%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLNDSKGNGE--EFINEVASISRTSHVNVVTL 386
LG G +G+VYKG + +G V A+K+LN++ G EF++E ++ H ++V L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + L+ + + +G L ++++ + +I + + LL V IA+G+ YL
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGS-----QLLLNWCVQIAKGMMYLE-- 157
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLA++ E + G + + ++A E C
Sbjct: 158 -ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE--CI 214
Query: 507 NIGEVSYKSD 516
+ + +++SD
Sbjct: 215 HYRKFTHQSD 224
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 63
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E++S GSL F+ + L L+ +A IA G+
Sbjct: 64 KLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMA 118
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D++ NIL+ E+ K++DFGLA++ E + GA+ + + AP
Sbjct: 119 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKWTAP 174
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 175 EAAL--YGRFTIKSD 187
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 11/188 (5%)
Query: 329 SFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
+F +LG G +G V GK +VA+K++ + + +EFI E + SH +V L G
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
C + R +I E+++NG L ++ H+ + LL++ + +EYL S
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQLLEMCKDVCEAMEYLE---S 123
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
+ LH D+ N L+++ K+SDFGL++ E S G++ V + PEV +
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSRGSKFPVRWSPPEVLMYS- 181
Query: 509 GEVSYKSD 516
+ S KSD
Sbjct: 182 -KFSSKSD 188
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 96/192 (50%), Gaps = 24/192 (12%)
Query: 334 LGQGGYGSVY--------KGKLIDGSNVAVKVLND--SKGNGEEFINEVASISRT-SHVN 382
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFI-YRNSSSIE---------NHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ R +E ++T++ L+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
+ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 493 RGTVGYIAPEVF 504
R V ++APE
Sbjct: 220 RLPVKWMAPEAL 231
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
++ + T +LG G +G V+ G + VAVK L + + F+ E + + H
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 77
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L + +I E++ NGSL F+ + S I KLT LL +A IA G+
Sbjct: 78 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-KTPSGI---KLTINKLLDMAAQIAEGMA 132
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
++ +H D++ NIL+ + KI+DFGLA++ E + GA+ + + AP
Sbjct: 133 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAP 188
Query: 502 EVFCRNIGEVSYKSD 516
E N G + KSD
Sbjct: 189 EAI--NYGTFTIKSD 201
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 99/184 (53%), Gaps = 19/184 (10%)
Query: 333 KLGQGGYGSVYKG---KLIDG---SNVAVKVLNDSKGNGE--EFINEVASISRTSHVNVV 384
+LGQG +G VY+G +I G + VAVK +N+S E EF+NE + + + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 385 TLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENH----KLTWETLLQIAVGIARGL 440
LLG +G+ ++ E +++G L+ ++ EN+ T + ++Q+A IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 498
YL+ + + +H D+ N ++ DF KI DFG+ + + E+ G +G V +
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 198
Query: 499 IAPE 502
+APE
Sbjct: 199 MAPE 202
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
++ + T +LG G +G V+ G + VAVK L + + F+ E + + H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L + +I E++ NGSL F+ + S I KLT LL +A IA G+
Sbjct: 75 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-KTPSGI---KLTINKLLDMAAQIAEGMA 129
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
++ +H D++ NIL+ + KI+DFGLA++ E + GA+ + + AP
Sbjct: 130 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAP 185
Query: 502 EVFCRNIGEVSYKSD 516
E N G + KSD
Sbjct: 186 EAI--NYGTFTIKSD 198
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
++ + T +LG G +G V+ G + VAVK L + + F+ E + + H
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 76
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L + +I E++ NGSL F+ + S I KLT LL +A IA G+
Sbjct: 77 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-KTPSGI---KLTINKLLDMAAQIAEGMA 131
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
++ +H D++ NIL+ + KI+DFGLA++ E + GA+ + + AP
Sbjct: 132 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAP 187
Query: 502 EVFCRNIGEVSYKSD 516
E N G + KSD
Sbjct: 188 EAI--NYGTFTIKSD 200
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 112/217 (51%), Gaps = 31/217 (14%)
Query: 310 HGSLAPRRYSYADI----------KKMTNSFKYKLGQGGYGSVYKG------KLIDGSNV 353
+ S+ P +S AD+ +K+T S +LGQG +G VY+G K + V
Sbjct: 23 YASVNPEYFSAADVYVPDEWEVAREKITMS--RELGQGSFGMVYEGVAKGVVKDEPETRV 80
Query: 354 AVKVLNDSKGNGE--EFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKF 411
A+K +N++ E EF+NE + + + +VV LLG +G+ +I E ++ G L+ +
Sbjct: 81 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 140
Query: 412 IYRNSSSIENHKL----TWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDF 467
+ +EN+ + + ++Q+A IA G+ YL+ + + +H D+ N ++ EDF
Sbjct: 141 LRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF 197
Query: 468 CPKISDFGLAKICNRKESIISMTGARG--TVGYIAPE 502
KI DFG+ + + E+ G +G V +++PE
Sbjct: 198 TVKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPE 232
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 24/192 (12%)
Query: 334 LGQGGYGSVY--------KGKLIDGSNVAVKVLND--SKGNGEEFINEVASISRT-SHVN 382
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFI-YRNSSSIE---------NHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ R +E ++T++ L+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
+ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 493 RGTVGYIAPEVF 504
R V ++APE
Sbjct: 220 RLPVKWMAPEAL 231
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
++ + T +LG G +G V+ G + VAVK L + + F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L + +I E++ NGSL F+ + S I KLT LL +A IA G+
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-KTPSGI---KLTINKLLDMAAQIAEGMA 123
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
++ +H D++ NIL+ + KI+DFGLA++ E + GA+ + + AP
Sbjct: 124 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAP 179
Query: 502 EVFCRNIGEVSYKSD 516
E N G + KSD
Sbjct: 180 EAI--NYGTFTIKSD 192
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
++ + T +LG G +G V+ G + VAVK L + + F+ E + + H
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 78
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L + +I E++ NGSL F+ + S I KLT LL +A IA G+
Sbjct: 79 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-KTPSGI---KLTINKLLDMAAQIAEGMA 133
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
++ +H D++ NIL+ + KI+DFGLA++ E + GA+ + + AP
Sbjct: 134 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAP 189
Query: 502 EVFCRNIGEVSYKSD 516
E N G + KSD
Sbjct: 190 EAI--NYGTFTIKSD 202
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 31/216 (14%)
Query: 311 GSLAPRRYSYADI----------KKMTNSFKYKLGQGGYGSVYKG------KLIDGSNVA 354
S+ P +S AD+ +K+T S +LGQG +G VY+G K + VA
Sbjct: 2 ASVNPEYFSAADVYVPDEWEVAREKITMS--RELGQGSFGMVYEGVAKGVVKDEPETRVA 59
Query: 355 VKVLNDSKGNGE--EFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFI 412
+K +N++ E EF+NE + + + +VV LLG +G+ +I E ++ G L+ ++
Sbjct: 60 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
Query: 413 YRNSSSIENHKL----TWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFC 468
+EN+ + + ++Q+A IA G+ YL+ + + +H D+ N ++ EDF
Sbjct: 120 RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFT 176
Query: 469 PKISDFGLAKICNRKESIISMTGARG--TVGYIAPE 502
KI DFG+ + + E+ G +G V +++PE
Sbjct: 177 VKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPE 210
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 15/187 (8%)
Query: 334 LGQGGYGSVYKGKLI--DGSN--VAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTL 386
LG+G +GSV +G L DG++ VAVK + N S+ EEF++E A + SH NV+ L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 387 LGFCFEGRRRAL-----IYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
LG C E + + I F+ G L ++ + + +TLL+ V IA G+E
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
YL + LH D+ N +L +D ++DFGL+K + A+ V +IA
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 502 EVFCRNI 508
E +
Sbjct: 219 ESLADRV 225
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 66
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E++S GSL F+ + L L+ +A IA G+
Sbjct: 67 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMA 121
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D++ NIL+ E+ K++DFGLA++ E + GA+ + + AP
Sbjct: 122 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 177
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 178 EAAL--YGRFTIKSD 190
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 99/184 (53%), Gaps = 19/184 (10%)
Query: 333 KLGQGGYGSVYKG---KLIDG---SNVAVKVLNDSKGNGE--EFINEVASISRTSHVNVV 384
+LGQG +G VY+G +I G + VAVK +N+S E EF+NE + + + +VV
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 385 TLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENH----KLTWETLLQIAVGIARGL 440
LLG +G+ ++ E +++G L+ ++ EN+ T + ++Q+A IA G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 498
YL+ + + +H D+ N ++ DF KI DFG+ + + E+ G +G V +
Sbjct: 143 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 197
Query: 499 IAPE 502
+APE
Sbjct: 198 MAPE 201
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E++S GSL F+ + L L+ +A IA G+
Sbjct: 240 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMA 294
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D++ NIL+ E+ K++DFGLA++ E + GA+ + + AP
Sbjct: 295 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 350
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 351 EAAL--YGRFTIKSD 363
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 24/192 (12%)
Query: 334 LGQGGYGSVY--------KGKLIDGSNVAVKVLND--SKGNGEEFINEVASISRT-SHVN 382
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFI-YRNSSSIE---------NHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ R +E ++T++ L+
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
+ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 493 RGTVGYIAPEVF 504
R V ++APE
Sbjct: 220 RLPVKWMAPEAL 231
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
++ + T +LG G +G V+ G + VAVK L + + F+ E + + H
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 70
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L + +I E++ NGSL F+ + S I KLT LL +A IA G+
Sbjct: 71 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-KTPSGI---KLTINKLLDMAAQIAEGMA 125
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
++ +H D++ NIL+ + KI+DFGLA++ E + GA+ + + AP
Sbjct: 126 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAP 181
Query: 502 EVFCRNIGEVSYKSD 516
E N G + KSD
Sbjct: 182 EAI--NYGTFTIKSD 194
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E++S GSL F+ + L L+ +A IA G+
Sbjct: 240 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMA 294
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D++ NIL+ E+ K++DFGLA++ E + GA+ + + AP
Sbjct: 295 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 350
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 351 EAAL--YGRFTIKSD 363
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
++ + T +LG G +G V+ G + VAVK L + + F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L + +I E++ NGSL F+ + S I KLT LL +A IA G+
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-KTPSGI---KLTINKLLDMAAQIAEGMA 123
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
++ +H D++ NIL+ + KI+DFGLA++ E + GA+ + + AP
Sbjct: 124 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAP 179
Query: 502 EVFCRNIGEVSYKSD 516
E N G + KSD
Sbjct: 180 EAI--NYGTFTIKSD 192
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 24/196 (12%)
Query: 334 LGQGGYGSVYKGKLI----DGSN----VAVKVL--NDSKGNGEEFINEVASISRT-SHVN 382
LG+G +G V + I D N VAVK+L + ++ + + I+E+ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFIYR----------NSSSIENHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ N S +L+ + L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
A +ARG+EYL S + +H D+ N+L+ ED KI+DFGLA+ + + T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 493 RGTVGYIAPEVFCRNI 508
R V ++APE I
Sbjct: 213 RLPVKWMAPEALFDRI 228
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 322
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E++S GSL F+ + L L+ +A IA G+
Sbjct: 323 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMA 377
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D++ NIL+ E+ K++DFGLA++ E + GA+ + + AP
Sbjct: 378 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 433
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 434 EAAL--YGRFTIKSD 446
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
++ + T +LG G +G V+ G + VAVK L + + F+ E + + H
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 69
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L + +I E++ NGSL F+ + S I KLT LL +A IA G+
Sbjct: 70 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-KTPSGI---KLTINKLLDMAAQIAEGMA 124
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
++ +H D++ NIL+ + KI+DFGLA++ E + GA+ + + AP
Sbjct: 125 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAP 180
Query: 502 EVFCRNIGEVSYKSD 516
E N G + KSD
Sbjct: 181 EAI--NYGTFTIKSD 193
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
++ + T +LG G +G V+ G + VAVK L + + F+ E + + H
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 73
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L + +I E++ NGSL F+ + S I KLT LL +A IA G+
Sbjct: 74 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-KTPSGI---KLTINKLLDMAAQIAEGMA 128
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
++ +H D++ NIL+ + KI+DFGLA++ E + GA+ + + AP
Sbjct: 129 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAP 184
Query: 502 EVFCRNIGEVSYKSD 516
E N G + KSD
Sbjct: 185 EAI--NYGTFTIKSD 197
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
++ + T +LG G +G V+ G + VAVK L + + F+ E + + H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L + +I E++ NGSL F+ + S I KLT LL +A IA G+
Sbjct: 75 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-KTPSGI---KLTINKLLDMAAQIAEGMA 129
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
++ +H D++ NIL+ + KI+DFGLA++ E + GA+ + + AP
Sbjct: 130 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAP 185
Query: 502 EVFCRNIGEVSYKSD 516
E N G + KSD
Sbjct: 186 EAI--NYGTFTIKSD 198
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E++S GSL F+ L L+ +A IA G+
Sbjct: 74 KLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMA 128
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D++ NIL+ E+ K++DFGLA++ E + GA+ + + AP
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKWTAP 184
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 185 EAAL--YGRFTIKSD 197
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 24/192 (12%)
Query: 334 LGQGGYGSVY--------KGKLIDGSNVAVKVLND--SKGNGEEFINEVASISRT-SHVN 382
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFI-YRNSSSIE---------NHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ R +E ++T++ L+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
+ARG+EYL S + +H D+ N+L+ E+ +I+DFGLA+ N + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 493 RGTVGYIAPEVF 504
R V ++APE
Sbjct: 220 RLPVKWMAPEAL 231
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
++ + T +LG G +G V+ G + VAVK L + + F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L + +I E++ NGSL F+ + S I KLT LL +A IA G+
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-KTPSGI---KLTINKLLDMAAQIAEGMA 123
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
++ +H D++ NIL+ + KI+DFGLA++ E + GA+ + + AP
Sbjct: 124 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAP 179
Query: 502 EVFCRNIGEVSYKSD 516
E N G + KSD
Sbjct: 180 EAI--NYGTFTIKSD 192
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E++S GSL F+ + L L+ +A IA G+
Sbjct: 240 KLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMA 294
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D++ NIL+ E+ K++DFGLA++ E + GA+ + + AP
Sbjct: 295 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 350
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 351 EAAL--YGRFTIKSD 363
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 102/195 (52%), Gaps = 19/195 (9%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKG------KLIDGSNVAVKVLNDSKGNGE--EFINEVA 373
++ + + +LGQG +G VY+G K + VA+K +N++ E EF+NE +
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 374 SISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKL----TWETL 429
+ + +VV LLG +G+ +I E ++ G L+ ++ +EN+ + + +
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 430 LQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM 489
+Q+A IA G+ YL+ + + +H D+ N ++ EDF KI DFG+ + + E+
Sbjct: 135 IQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXR 189
Query: 490 TGARG--TVGYIAPE 502
G +G V +++PE
Sbjct: 190 KGGKGLLPVRWMSPE 204
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
++ + T +LG G +G V+ G + VAVK L + + F+ E + + H
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 63
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L + +I E++ NGSL F+ + S I KLT LL +A IA G+
Sbjct: 64 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-KTPSGI---KLTINKLLDMAAQIAEGMA 118
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
++ +H D++ NIL+ + KI+DFGLA++ E + GA+ + + AP
Sbjct: 119 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAP 174
Query: 502 EVFCRNIGEVSYKSD 516
E N G + KSD
Sbjct: 175 EAI--NYGTFTIKSD 187
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 24/196 (12%)
Query: 334 LGQGGYGSVYKGKLI----DGSN----VAVKVL--NDSKGNGEEFINEVASISRT-SHVN 382
LG+G +G V + I D N VAVK+L + ++ + + I+E+ + H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFIYR----------NSSSIENHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ N S +L+ + L+
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
A +ARG+EYL S + +H D+ N+L+ ED KI+DFGLA+ + + T
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 493 RGTVGYIAPEVFCRNI 508
R V ++APE I
Sbjct: 198 RLPVKWMAPEALFDRI 213
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 102/195 (52%), Gaps = 19/195 (9%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKG------KLIDGSNVAVKVLNDSKGNGE--EFINEVA 373
++ + + +LGQG +G VY+G K + VA+K +N++ E EF+NE +
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 374 SISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKL----TWETL 429
+ + +VV LLG +G+ +I E ++ G L+ ++ +EN+ + + +
Sbjct: 66 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 125
Query: 430 LQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM 489
+Q+A IA G+ YL+ + + +H D+ N ++ EDF KI DFG+ + + E+
Sbjct: 126 IQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXR 180
Query: 490 TGARG--TVGYIAPE 502
G +G V +++PE
Sbjct: 181 KGGKGLLPVRWMSPE 195
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHE 73
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E++S GSL F+ L L+ +A IA G+
Sbjct: 74 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMA 128
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D++ NIL+ E+ K++DFGLA++ E + GA+ + + AP
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 185 EAAL--YGRFTIKSD 197
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E++S GSL F+ L L+ +A IA G+
Sbjct: 74 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMA 128
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D++ NIL+ E+ K++DFGLA++ E + GA+ + + AP
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 185 EAAL--YGRFTIKSD 197
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E++S GSL F+ L L+ +A IA G+
Sbjct: 74 KLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMA 128
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D++ NIL+ E+ K++DFGLA++ E + GA+ + + AP
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 185 EAAL--YGRFTIKSD 197
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 24/192 (12%)
Query: 334 LGQGGYGSVY--------KGKLIDGSNVAVKVLND--SKGNGEEFINEVASISRT-SHVN 382
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFI-YRNSSSIE---------NHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ R +E ++T++ L+
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
+ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 493 RGTVGYIAPEVF 504
R V ++APE
Sbjct: 266 RLPVKWMAPEAL 277
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 64
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E++S GSL F+ L L+ +A IA G+
Sbjct: 65 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMA 119
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D++ NIL+ E+ K++DFGLA++ E + GA+ + + AP
Sbjct: 120 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 175
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 176 EAAL--YGRFTIKSD 188
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 62
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E++S GSL F+ L L+ +A IA G+
Sbjct: 63 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMA 117
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D++ NIL+ E+ K++DFGLA++ E + GA+ + + AP
Sbjct: 118 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 173
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 174 EAAL--YGRFTIKSD 186
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 24/196 (12%)
Query: 334 LGQGGYGSVYKGKLI----DGSN----VAVKVL--NDSKGNGEEFINEVASISRT-SHVN 382
LG+G +G V + I D N VAVK+L + ++ + + I+E+ + H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFIYR----------NSSSIENHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ N S +L+ + L+
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
A +ARG+EYL S + +H D+ N+L+ ED KI+DFGLA+ + + T
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 493 RGTVGYIAPEVFCRNI 508
R V ++APE I
Sbjct: 202 RLPVKWMAPEALFDRI 217
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 24/196 (12%)
Query: 334 LGQGGYGSVYKGKLI----DGSN----VAVKVL--NDSKGNGEEFINEVASISRT-SHVN 382
LG+G +G V + I D N VAVK+L + ++ + + I+E+ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFIYR----------NSSSIENHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ N S +L+ + L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
A +ARG+EYL S + +H D+ N+L+ ED KI+DFGLA+ + + T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 493 RGTVGYIAPEVFCRNI 508
R V ++APE I
Sbjct: 213 RLPVKWMAPEALFDRI 228
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 24/192 (12%)
Query: 334 LGQGGYGSVY--------KGKLIDGSNVAVKVLND--SKGNGEEFINEVASISRT-SHVN 382
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFI-YRNSSSIE---------NHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ R +E ++T++ L+
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
+ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 493 RGTVGYIAPEVF 504
R V ++APE
Sbjct: 207 RLPVKWMAPEAL 218
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 24/196 (12%)
Query: 334 LGQGGYGSVYKGKLI----DGSN----VAVKVL--NDSKGNGEEFINEVASISRT-SHVN 382
LG+G +G V + I D N VAVK+L + ++ + + I+E+ + H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFIYR----------NSSSIENHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ N S +L+ + L+
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
A +ARG+EYL S + +H D+ N+L+ ED KI+DFGLA+ + + T
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 493 RGTVGYIAPEVFCRNI 508
R V ++APE I
Sbjct: 206 RLPVKWMAPEALFDRI 221
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 24/192 (12%)
Query: 334 LGQGGYGSVY--------KGKLIDGSNVAVKVLND--SKGNGEEFINEVASISRT-SHVN 382
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFI-YRNSSSIE---------NHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ R +E ++T++ L+
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
+ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 493 RGTVGYIAPEVF 504
R V ++APE
Sbjct: 209 RLPVKWMAPEAL 220
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 24/196 (12%)
Query: 334 LGQGGYGSVYKGKLI----DGSN----VAVKVL--NDSKGNGEEFINEVASISRT-SHVN 382
LG+G +G V + I D N VAVK+L + ++ + + I+E+ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFIYR----------NSSSIENHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ N S +L+ + L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
A +ARG+EYL S + +H D+ N+L+ ED KI+DFGLA+ + + T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 493 RGTVGYIAPEVFCRNI 508
R V ++APE I
Sbjct: 213 RLPVKWMAPEALFDRI 228
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 24/192 (12%)
Query: 334 LGQGGYGSVY--------KGKLIDGSNVAVKVLND--SKGNGEEFINEVASISRT-SHVN 382
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFI-YRNSSSIE---------NHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ R +E ++T++ L+
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
+ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 493 RGTVGYIAPEVF 504
R V ++APE
Sbjct: 212 RLPVKWMAPEAL 223
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 91/175 (52%), Gaps = 14/175 (8%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
K+G+G YG VYK K G VA+K + + +G I E++ + H N+V+L+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
R L++EF+ L+K + N + +++ ++ L Q+ G+A ++
Sbjct: 88 IHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKI-YLYQLLRGVAHCHQH------- 138
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
RILH D+KP N+L++ D K++DFGLA+ + S T T+ Y AP+V
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGI--PVRSYTHEVVTLWYRAPDVL 191
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 17/189 (8%)
Query: 333 KLGQGGYGSVYKGKL-IDGSNVAVKVLNDS--KGNGEEFINEVASISRTSHVNVVTLLGF 389
++G+G +G V+ G+L D + VAVK ++ +F+ E + + SH N+V L+G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
C + + ++ E V G F+ E +L +TLLQ+ A G+EYL C
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFL-----RTEGARLRVKTLLQMVGDAAAGMEYLESKCC- 234
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA--RGTVGYIAPEVFCRN 507
+H D+ N L+ E KISDFG+++ + + + +G + V + APE N
Sbjct: 235 --IHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVXAASGGLRQVPVKWTAPEAL--N 288
Query: 508 IGEVSYKSD 516
G S +SD
Sbjct: 289 YGRYSSESD 297
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 24/196 (12%)
Query: 334 LGQGGYGSVYKGKLI----DGSN----VAVKVL--NDSKGNGEEFINEVASISRT-SHVN 382
LG+G +G V + I D N VAVK+L + ++ + + I+E+ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFIYR----------NSSSIENHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ N S +L+ + L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
A +ARG+EYL S + +H D+ N+L+ ED KI+DFGLA+ + + T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 493 RGTVGYIAPEVFCRNI 508
R V ++APE I
Sbjct: 213 RLPVKWMAPEALFDRI 228
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
++ + T +LG G G V+ G + VAVK L + + F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L + +I E++ NGSL F+ + S I KLT LL +A IA G+
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-KTPSGI---KLTINKLLDMAAQIAEGMA 123
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
++ +H D++ NIL+ + KI+DFGLA++ E + GA+ + + AP
Sbjct: 124 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEX-TAREGAKFPIKWTAP 179
Query: 502 EVFCRNIGEVSYKSD 516
E N G + KSD
Sbjct: 180 EAI--NYGTFTIKSD 192
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 24/196 (12%)
Query: 334 LGQGGYGSVYKGKLI----DGSN----VAVKVL--NDSKGNGEEFINEVASISRT-SHVN 382
LG+G +G V + I D N VAVK+L + ++ + + I+E+ + H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFIYR----------NSSSIENHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ N S +L+ + L+
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
A +ARG+EYL S + +H D+ N+L+ ED KI+DFGLA+ + + T
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 493 RGTVGYIAPEVFCRNI 508
R V ++APE I
Sbjct: 205 RLPVKWMAPEALFDRI 220
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 24/196 (12%)
Query: 334 LGQGGYGSVYKGKLI----DGSN----VAVKVL--NDSKGNGEEFINEVASISRT-SHVN 382
LG+G +G V + I D N VAVK+L + ++ + + I+E+ + H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFIYR----------NSSSIENHKLTWETLLQI 432
++ LLG C + +I E+ S G+L +++ N S +L+ + L+
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
A +ARG+EYL S + +H D+ N+L+ ED KI+DFGLA+ + + T
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 493 RGTVGYIAPEVFCRNI 508
R V ++APE I
Sbjct: 254 RLPVKWMAPEALFDRI 269
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 91/175 (52%), Gaps = 14/175 (8%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
K+G+G YG VYK K G VA+K + + +G I E++ + H N+V+L+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
R L++EF+ L+K + N + +++ ++ L Q+ G+A ++
Sbjct: 88 IHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKI-YLYQLLRGVAHCHQH------- 138
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
RILH D+KP N+L++ D K++DFGLA+ + S T T+ Y AP+V
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGI--PVRSYTHEVVTLWYRAPDVL 191
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 111/216 (51%), Gaps = 31/216 (14%)
Query: 311 GSLAPRRYSYADI----------KKMTNSFKYKLGQGGYGSVYKG------KLIDGSNVA 354
S+ P +S AD+ +K+T S +LGQG +G VY+G K + VA
Sbjct: 2 ASVNPEYFSAADVYVPDEWEVAREKITMS--RELGQGSFGMVYEGVAKGVVKDEPETRVA 59
Query: 355 VKVLNDSKGNGE--EFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFI 412
+K +N++ E EF+NE + + + +VV LLG +G+ +I E ++ G L+ ++
Sbjct: 60 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
Query: 413 YRNSSSIENHKL----TWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFC 468
++ N+ + + ++Q+A IA G+ YL+ + + +H D+ N ++ EDF
Sbjct: 120 RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFT 176
Query: 469 PKISDFGLAKICNRKESIISMTGARG--TVGYIAPE 502
KI DFG+ + + E+ G +G V +++PE
Sbjct: 177 VKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPE 210
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 17/189 (8%)
Query: 333 KLGQGGYGSVYKGKL-IDGSNVAVKVLNDS--KGNGEEFINEVASISRTSHVNVVTLLGF 389
++G+G +G V+ G+L D + VAVK ++ +F+ E + + SH N+V L+G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
C + + ++ E V G F+ E +L +TLLQ+ A G+EYL C
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFL-----RTEGARLRVKTLLQMVGDAAAGMEYLESKCC- 234
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA--RGTVGYIAPEVFCRN 507
+H D+ N L+ E KISDFG+++ + + + +G + V + APE N
Sbjct: 235 --IHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVYAASGGLRQVPVKWTAPEAL--N 288
Query: 508 IGEVSYKSD 516
G S +SD
Sbjct: 289 YGRYSSESD 297
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 99/184 (53%), Gaps = 19/184 (10%)
Query: 333 KLGQGGYGSVYKG---KLIDG---SNVAVKVLNDSKGNGE--EFINEVASISRTSHVNVV 384
+LGQG +G VY+G +I G + VAVK +N+S E EF+NE + + + +VV
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 385 TLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENH----KLTWETLLQIAVGIARGL 440
LLG +G+ ++ E +++G L+ ++ EN+ T + ++Q+A IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 498
YL+ + + +H ++ N ++ DF KI DFG+ + + E+ G +G V +
Sbjct: 144 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 198
Query: 499 IAPE 502
+APE
Sbjct: 199 MAPE 202
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E++S GSL F+ L L+ +A IA G+
Sbjct: 74 KLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMA 128
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D++ NIL+ E+ K++DFGLA++ E + GA+ + + AP
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 185 EAAL--YGRFTIKSD 197
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 99/184 (53%), Gaps = 19/184 (10%)
Query: 333 KLGQGGYGSVYKG---KLIDG---SNVAVKVLNDSKGNGE--EFINEVASISRTSHVNVV 384
+LGQG +G VY+G +I G + VAVK +N+S E EF+NE + + + +VV
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 385 TLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENH----KLTWETLLQIAVGIARGL 440
LLG +G+ ++ E +++G L+ ++ EN+ T + ++Q+A IA G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG--TVGY 498
YL+ + + +H ++ N ++ DF KI DFG+ + + E+ G +G V +
Sbjct: 145 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRW 199
Query: 499 IAPE 502
+APE
Sbjct: 200 MAPE 203
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 24/192 (12%)
Query: 334 LGQGGYGSVY--------KGKLIDGSNVAVKVLND--SKGNGEEFINEVASISRT-SHVN 382
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFI-YRNSSSIE---------NHKLTWETLLQI 432
++ LLG C + +I + S G+L +++ R +E ++T++ L+
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
+ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 493 RGTVGYIAPEVF 504
R V ++APE
Sbjct: 220 RLPVKWMAPEAL 231
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E++S GSL F+ L L+ +A IA G+
Sbjct: 74 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMA 128
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D+ NIL+ E+ K++DFGLA++ E + GA+ + + AP
Sbjct: 129 YVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 185 EAAL--YGRFTIKSD 197
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 94/179 (52%), Gaps = 16/179 (8%)
Query: 334 LGQGGYGSVYKGKLIDGSN-----VAVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
+G G +G VYKG L S VA+K L ++ +F+ E + + SH N++ L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
G + + +I E++ NG+L+KF+ ++ + + L+ + GIA G++YL
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLRE-----KDGEFSVLQLVGMLRGIAAGMKYL--- 163
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVF 504
+ +H D+ NIL++ + K+SDFGL+++ + E+ + +G + + + APE
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE 392
KLG G +G V+ G + + VAVK L + + F+ E + H +V L +
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 393 GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRIL 452
+I EF++ GSL F+ S E K+ L+ + IA G+ Y+ +
Sbjct: 79 EEPIYIITEFMAKGSLLDFL----KSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYI 131
Query: 453 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
H D++ N+L+ E KI+DFGLA++ E + GA+ + + APE
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI 182
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 102/195 (52%), Gaps = 19/195 (9%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKG------KLIDGSNVAVKVLNDSKGNGE--EFINEVA 373
++ + + +LGQG +G VY+G K + VA+K +N++ E EF+NE +
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 374 SISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKL----TWETL 429
+ + +VV LLG +G+ +I E ++ G L+ ++ +EN+ + + +
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 430 LQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM 489
+Q+A IA G+ YL+ + + +H D+ N ++ EDF KI DFG+ + + E+
Sbjct: 134 IQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR 188
Query: 490 TGARG--TVGYIAPE 502
G +G V +++PE
Sbjct: 189 KGGKGLLPVRWMSPE 203
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 102/195 (52%), Gaps = 19/195 (9%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKG------KLIDGSNVAVKVLNDSKGNGE--EFINEVA 373
++ + + +LGQG +G VY+G K + VA+K +N++ E EF+NE +
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 71
Query: 374 SISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKL----TWETL 429
+ + +VV LLG +G+ +I E ++ G L+ ++ +EN+ + + +
Sbjct: 72 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 131
Query: 430 LQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM 489
+Q+A IA G+ YL+ + + +H D+ N ++ EDF KI DFG+ + + E+
Sbjct: 132 IQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR 186
Query: 490 TGARG--TVGYIAPE 502
G +G V +++PE
Sbjct: 187 KGGKGLLPVRWMSPE 201
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 102/195 (52%), Gaps = 19/195 (9%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKG------KLIDGSNVAVKVLNDSKGNGE--EFINEVA 373
++ + + +LGQG +G VY+G K + VA+K +N++ E EF+NE +
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 374 SISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKL----TWETL 429
+ + +VV LLG +G+ +I E ++ G L+ ++ +EN+ + + +
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 430 LQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM 489
+Q+A IA G+ YL+ + + +H D+ N ++ EDF KI DFG+ + + E+
Sbjct: 128 IQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR 182
Query: 490 TGARG--TVGYIAPE 502
G +G V +++PE
Sbjct: 183 KGGKGLLPVRWMSPE 197
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 102/195 (52%), Gaps = 19/195 (9%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKG------KLIDGSNVAVKVLNDSKGNGE--EFINEVA 373
++ + + +LGQG +G VY+G K + VA+K +N++ E EF+NE +
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 374 SISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKL----TWETL 429
+ + +VV LLG +G+ +I E ++ G L+ ++ +EN+ + + +
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 430 LQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM 489
+Q+A IA G+ YL+ + + +H D+ N ++ EDF KI DFG+ + + E+
Sbjct: 134 IQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR 188
Query: 490 TGARG--TVGYIAPE 502
G +G V +++PE
Sbjct: 189 KGGKGLLPVRWMSPE 203
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 102/195 (52%), Gaps = 19/195 (9%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKG------KLIDGSNVAVKVLNDSKGNGE--EFINEVA 373
++ + + +LGQG +G VY+G K + VA+K +N++ E EF+NE +
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 374 SISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKL----TWETL 429
+ + +VV LLG +G+ +I E ++ G L+ ++ +EN+ + + +
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 430 LQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM 489
+Q+A IA G+ YL+ + + +H D+ N ++ EDF KI DFG+ + + E+
Sbjct: 135 IQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR 189
Query: 490 TGARG--TVGYIAPE 502
G +G V +++PE
Sbjct: 190 KGGKGLLPVRWMSPE 204
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 10/184 (5%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE 392
+LG G +G V+ G + + VAVK L + + F+ E + H +V L
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 393 GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRIL 452
+I E+++ GSL F+ S E K+ L+ + IA G+ Y+ +
Sbjct: 80 EEPIYIITEYMAKGSLLDFL----KSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYI 132
Query: 453 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 512
H D++ N+L+ E KI+DFGLA++ E + GA+ + + APE N G +
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI--NFGCFT 189
Query: 513 YKSD 516
KSD
Sbjct: 190 IKSD 193
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 15/178 (8%)
Query: 334 LGQGGYGSVYKG--KLIDGSNVAVKVLNDSKGNGE----EFINEVASISRTSHVNVVTLL 387
+G G +G V G KL +VAV + G E +F+ E + + + H NVV L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G G+ ++ EF+ NG+L+ F+ ++ + + T L+ + GIA G+ YL
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKH-----DGQFTVIQLVGMLRGIAAGMRYL---A 162
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVF 504
+H D+ NIL++ + K+SDFGL+++ + E++ + TG + V + APE
Sbjct: 163 DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAI 220
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 24/192 (12%)
Query: 334 LGQGGYGSVY--------KGKLIDGSNVAVKVLND--SKGNGEEFINEVASISRT-SHVN 382
LG+G +G V K K + VAVK+L D ++ + + ++E+ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 383 VVTLLGFCFEGRRRALIYEFVSNGSLEKFI-YRNSSSIE---------NHKLTWETLLQI 432
++ LLG C + +I + S G+L +++ R +E ++T++ L+
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
+ARG+EYL S + +H D+ N+L+ E+ KI+DFGLA+ N + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 493 RGTVGYIAPEVF 504
R V ++APE
Sbjct: 220 RLPVKWMAPEAL 231
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E+++ GSL F+ + L L+ ++ IA G+
Sbjct: 71 KLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKY----LRLPQLVDMSAQIASGMA 125
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D++ NIL+ E+ K++DFGLA++ E + GA+ + + AP
Sbjct: 126 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-WTARQGAKFPIKWTAP 181
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 182 EAAL--YGRFTIKSD 194
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E+++ GSL F+ + L L+ ++ IA G+
Sbjct: 71 KLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKY----LRLPQLVDMSAQIASGMA 125
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D++ NIL+ E+ K++DFGLA++ E + GA+ + + AP
Sbjct: 126 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 181
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 182 EAAL--YGRFTIKSD 194
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E++S G L F+ L L+ +A IA G+
Sbjct: 74 KLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKY----LRLPQLVDMAAQIASGMA 128
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D++ NIL+ E+ K++DFGLA++ E + GA+ + + AP
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 185 EAAL--YGRFTIKSD 197
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
++ + T +LG G +G V+ G + VAVK L + + F+ E + + H
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 64
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L + +I E++ NGSL F+ + S I KLT LL +A IA G+
Sbjct: 65 RLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-KTPSGI---KLTINKLLDMAAQIAEGMA 119
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
++ +H +++ NIL+ + KI+DFGLA++ E + GA+ + + AP
Sbjct: 120 FIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAP 175
Query: 502 EVFCRNIGEVSYKSD 516
E N G + KSD
Sbjct: 176 EAI--NYGTFTIKSD 188
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHE 240
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E++S GSL F+ L L+ +A IA G+
Sbjct: 241 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMA 295
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D++ NIL+ E+ K++DFGL ++ E + GA+ + + AP
Sbjct: 296 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNE-YTARQGAKFPIKWTAP 351
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 352 EAAL--YGRFTIKSD 364
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 25/184 (13%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVKVL-----NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G GG+G VY+ I G VAVK D E E + H N++ L G
Sbjct: 15 IGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
C + L+ EF G L + + ++ + L+ AV IARG+ YLH
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVL-------SGKRIPPDILVNWAVQIARGMNYLHDEAI 126
Query: 449 TRILHFDIKPHNILLDEDF--------CPKISDFGLAKICNRKESIISMTGARGTVGYIA 500
I+H D+K NIL+ + KI+DFGLA+ +R + A G ++A
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM----SAAGAYAWMA 182
Query: 501 PEVF 504
PEV
Sbjct: 183 PEVI 186
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLGQG +G V+ G + VA+K L + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L E ++ E++S G L F+ L L+ +A IA G+
Sbjct: 74 KLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKY----LRLPQLVDMAAQIASGMA 128
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
Y+ +H D++ NIL+ E+ K++DFGLA++ E + GA+ + + AP
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 502 EVFCRNIGEVSYKSD 516
E G + KSD
Sbjct: 185 EAAL--YGRFTIKSD 197
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 101/195 (51%), Gaps = 19/195 (9%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKG------KLIDGSNVAVKVLNDSKGNGE--EFINEVA 373
++ + + +LGQG +G VY+G K + VA+K +N++ E EF+NE +
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 374 SISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKL----TWETL 429
+ + +VV LLG +G+ +I E ++ G L+ ++ +EN+ + + +
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 430 LQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM 489
+Q+A IA G+ YL+ + + +H D+ N + EDF KI DFG+ + + E+
Sbjct: 128 IQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTR--DIYETDYYR 182
Query: 490 TGARG--TVGYIAPE 502
G +G V +++PE
Sbjct: 183 KGGKGLLPVRWMSPE 197
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 102/195 (52%), Gaps = 19/195 (9%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKG------KLIDGSNVAVKVLNDSKGNGE--EFINEVA 373
++ + + +LGQG +G VY+G K + VA+K +N++ E EF+NE +
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 70
Query: 374 SISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKL----TWETL 429
+ + +VV LLG +G+ +I E ++ G L+ ++ ++ N+ + + +
Sbjct: 71 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 130
Query: 430 LQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM 489
+Q+A IA G+ YL+ + + +H D+ N ++ EDF KI DFG+ + + E+
Sbjct: 131 IQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYR 185
Query: 490 TGARG--TVGYIAPE 502
G +G V +++PE
Sbjct: 186 KGGKGLLPVRWMSPE 200
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 17/170 (10%)
Query: 323 IKKMTNSFKYKLGQGGYGSVYKGKLI------DGSNVAVKVLNDSKGNG-EEFINEVASI 375
IK+ K +LG+G +G V+ + D VAVK L D+ N ++F E +
Sbjct: 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 69
Query: 376 SRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSI-------ENHKLTWET 428
+ H ++V G C EG +++E++ +G L KF+ + +LT
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 429 LLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK 478
+L IA IA G+ YL S +H D+ N L+ E+ KI DFG+++
Sbjct: 130 MLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 329 SFKYKLGQGGYGSVYKGK---LID--GSNVAVKVLNDS-KGNGEEFINEVASISRTSHVN 382
F +LG+G +GSV + L D G VAVK L S + + +F E+ + H N
Sbjct: 16 KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 383 VVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+V G C+ RR LI EF+ GSL +++ ++ I++ KL LQ I +G+
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKL-----LQYTSQICKGM 130
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYI 499
EYL + R +H D+ NIL++ + KI DFGL K+ + KE + +
Sbjct: 131 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 500 APE 502
APE
Sbjct: 188 APE 190
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 89/190 (46%), Gaps = 29/190 (15%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINE--VASISRTSHVNVVTLL---- 387
+G+G YG+VYKG L D VAVKV S N + FINE + + H N+ +
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVF--SFANRQNFINEKNIYRVPLMEHDNIARFIVGDE 77
Query: 388 GFCFEGRRR-ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
+GR L+ E+ NGSL K++ ++S W + ++A + RGL YLH
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD-------WVSSCRLAHSVTRGLAYLHTE 130
Query: 447 C------STRILHFDIKPHNILLDEDFCPKISDFGLA------KICNRKESIISMTGARG 494
I H D+ N+L+ D ISDFGL+ ++ E + G
Sbjct: 131 LPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVG 190
Query: 495 TVGYIAPEVF 504
T+ Y+APEV
Sbjct: 191 TIRYMAPEVL 200
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 333 KLGQGGYGSVYKGKLI-DGSNVA---VKVLNDSKGNGEEFINEVASISRTS---HVNVVT 385
++G G YG+VYK + G VA V+V N +G + EVA + R H NVV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 386 LLGFCFEGR-----RRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
L+ C R + L++E V L ++ + L ET+ + RGL
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP----GLPAETIKDLMRQFLRGL 125
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 500
++LH C I+H D+KP NIL+ K++DFGLA+I + + ++ + T+ Y A
Sbjct: 126 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVV---VTLWYRA 179
Query: 501 PEVFCRN 507
PEV ++
Sbjct: 180 PEVLLQS 186
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 333 KLGQGGYGSVYKGKLI-DGSNVA---VKVLNDSKGNGEEFINEVASISRTS---HVNVVT 385
++G G YG+VYK + G VA V+V N +G + EVA + R H NVV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 386 LLGFCFEGR-----RRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
L+ C R + L++E V L ++ + L ET+ + RGL
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP----GLPAETIKDLMRQFLRGL 125
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 500
++LH C I+H D+KP NIL+ K++DFGLA+I + + +++ T+ Y A
Sbjct: 126 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALAPVVVTLWYRA 179
Query: 501 PEVFCRN 507
PEV ++
Sbjct: 180 PEVLLQS 186
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 329 SFKYKLGQGGYGSVYKGK---LID--GSNVAVKVLNDS-KGNGEEFINEVASISRTSHVN 382
F +LG+G +GSV + L D G VAVK L S + + +F E+ + H N
Sbjct: 12 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 383 VVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+V G C+ RR LI E++ GSL ++ ++ I++ KL LQ I +G+
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGM 126
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYI 499
EYL + R +H D+ NIL++ + KI DFGL K+ + KE + +
Sbjct: 127 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 183
Query: 500 APE 502
APE
Sbjct: 184 APE 186
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 329 SFKYKLGQGGYGSVYKGK---LID--GSNVAVKVLNDS-KGNGEEFINEVASISRTSHVN 382
F +LG+G +GSV + L D G VAVK L S + + +F E+ + H N
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 383 VVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+V G C+ RR LI E++ GSL ++ ++ I++ KL LQ I +G+
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGM 131
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYI 499
EYL + R +H D+ NIL++ + KI DFGL K+ + KE + +
Sbjct: 132 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 188
Query: 500 APE 502
APE
Sbjct: 189 APE 191
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 329 SFKYKLGQGGYGSVYKGK---LID--GSNVAVKVLNDS-KGNGEEFINEVASISRTSHVN 382
F +LG+G +GSV + L D G VAVK L S + + +F E+ + H N
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 383 VVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+V G C+ RR LI E++ GSL ++ ++ I++ KL LQ I +G+
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGM 125
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYI 499
EYL + R +H D+ NIL++ + KI DFGL K+ + KE + +
Sbjct: 126 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 182
Query: 500 APE 502
APE
Sbjct: 183 APE 185
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 329 SFKYKLGQGGYGSVYKGK---LID--GSNVAVKVLNDS-KGNGEEFINEVASISRTSHVN 382
F +LG+G +GSV + L D G VAVK L S + + +F E+ + H N
Sbjct: 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 383 VVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+V G C+ RR LI E++ GSL ++ ++ I++ KL LQ I +G+
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGM 158
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYI 499
EYL + R +H D+ NIL++ + KI DFGL K+ + KE + +
Sbjct: 159 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 215
Query: 500 APE 502
APE
Sbjct: 216 APE 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 329 SFKYKLGQGGYGSVYKGK---LID--GSNVAVKVLNDS-KGNGEEFINEVASISRTSHVN 382
F +LG+G +GSV + L D G VAVK L S + + +F E+ + H N
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 383 VVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+V G C+ RR LI E++ GSL ++ ++ I++ KL LQ I +G+
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGM 127
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYI 499
EYL + R +H D+ NIL++ + KI DFGL K+ + KE + +
Sbjct: 128 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 500 APE 502
APE
Sbjct: 185 APE 187
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 16/182 (8%)
Query: 333 KLGQGGYGSVYKGKLID-GSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCF 391
KLG+G YGSVYK + G VA+K + + + +E I E++ + + +VV G F
Sbjct: 36 KLGEGSYGSVYKAIHKETGQIVAIKQV-PVESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 392 EGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRI 451
+ ++ E+ GS+ I + N LT + + I +GLEYLH R
Sbjct: 95 KNTDLWIVMEYCGAGSVSDII-----RLRNKTLTEDEIATILQSTLKGLEYLHF---MRK 146
Query: 452 LHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEV 511
+H DIK NILL+ + K++DFG+A + + GT ++APEV I E+
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEV----IQEI 200
Query: 512 SY 513
Y
Sbjct: 201 GY 202
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 103/220 (46%), Gaps = 37/220 (16%)
Query: 314 APRRYSYADIKKMTNSFKYKLGQGGYGSVYKG------KLIDGSNVAVKVLNDSKGNGEE 367
PR DI+ + + F+ LG G + V KL+ +A K L +G+ E
Sbjct: 7 GPRWKQAEDIRDIYD-FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME- 64
Query: 368 FINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWE 427
NE+A + + H N+V L G LI + VS G L I +E T
Sbjct: 65 --NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI------VEKGFYTER 116
Query: 428 TLLQIAVGIARGLEYLH-LGCSTRILHFDIKPHNIL---LDEDFCPKISDFGLAKICNRK 483
++ + ++YLH LG I+H D+KP N+L LDED ISDFGL+K+ +
Sbjct: 117 DASRLIFQVLDAVKYLHDLG----IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 172
Query: 484 ESIISMTGARGTVGYIAPEVF----------CRNIGEVSY 513
S++S A GT GY+APEV C +IG ++Y
Sbjct: 173 -SVLST--ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 329 SFKYKLGQGGYGSVYKGK---LID--GSNVAVKVLNDS-KGNGEEFINEVASISRTSHVN 382
F +LG+G +GSV + L D G VAVK L S + + +F E+ + H N
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 383 VVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+V G C+ RR LI E++ GSL ++ ++ I++ KL LQ I +G+
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGM 132
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYI 499
EYL + R +H D+ NIL++ + KI DFGL K+ + KE + +
Sbjct: 133 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 189
Query: 500 APE 502
APE
Sbjct: 190 APE 192
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 333 KLGQGGYGSVYKGKLI-DGSNVA---VKVLNDSKGNGEEFINEVASISRTS---HVNVVT 385
++G G YG+VYK + G VA V+V N +G + EVA + R H NVV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 386 LLGFCFEGR-----RRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
L+ C R + L++E V L ++ + L ET+ + RGL
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP----GLPAETIKDLMRQFLRGL 125
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 500
++LH C I+H D+KP NIL+ K++DFGLA+I + + +++ T+ Y A
Sbjct: 126 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALDPVVVTLWYRA 179
Query: 501 PEVFCRN 507
PEV ++
Sbjct: 180 PEVLLQS 186
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 27/198 (13%)
Query: 311 GSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEE-- 367
G + RY D KLG GG +VY + I VA+K + EE
Sbjct: 6 GKIINERYKIVD----------KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETL 55
Query: 368 --FINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENH-KL 424
F EV + S+ SH N+V+++ E L+ E++ +L ++I E+H L
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI-------ESHGPL 108
Query: 425 TWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE 484
+ +T + I G+++ H RI+H DIKP NIL+D + KI DFG+AK + +
Sbjct: 109 SVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS-ET 164
Query: 485 SIISMTGARGTVGYIAPE 502
S+ GTV Y +PE
Sbjct: 165 SLTQTNHVLGTVQYFSPE 182
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 329 SFKYKLGQGGYGSVYKGK---LID--GSNVAVKVLNDS-KGNGEEFINEVASISRTSHVN 382
F +LG+G +GSV + L D G VAVK L S + + +F E+ + H N
Sbjct: 19 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 383 VVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+V G C+ RR LI E++ GSL ++ ++ I++ KL LQ I +G+
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGM 133
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYI 499
EYL + R +H D+ NIL++ + KI DFGL K+ + KE + +
Sbjct: 134 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 190
Query: 500 APE 502
APE
Sbjct: 191 APE 193
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 329 SFKYKLGQGGYGSVYKGK---LID--GSNVAVKVLNDS-KGNGEEFINEVASISRTSHVN 382
F +LG+G +GSV + L D G VAVK L S + + +F E+ + H N
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 383 VVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+V G C+ RR LI E++ GSL ++ ++ I++ KL LQ I +G+
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGM 130
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYI 499
EYL + R +H D+ NIL++ + KI DFGL K+ + KE + +
Sbjct: 131 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 500 APE 502
APE
Sbjct: 188 APE 190
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 17/193 (8%)
Query: 323 IKKMTNSFKYK-LGQGGYGSVYKGKLI-DGSNV----AVKVL--NDSKGNGEEFINEVAS 374
I K T K K LG G +G+VYKG I DG NV A+KVL N S +E ++E
Sbjct: 13 ILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYV 72
Query: 375 ISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAV 434
++ V LLG C + L+ + + G L + N +L + LL +
Sbjct: 73 MAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRG-----RLGSQDLLNWCM 126
Query: 435 GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG 494
IA+G+ YL R++H D+ N+L+ KI+DFGLA++ + E+ G +
Sbjct: 127 QIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV 183
Query: 495 TVGYIAPEVFCRN 507
+ ++A E R
Sbjct: 184 PIKWMALESILRR 196
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 329 SFKYKLGQGGYGSVYKGK---LID--GSNVAVKVLNDS-KGNGEEFINEVASISRTSHVN 382
F +LG+G +GSV + L D G VAVK L S + + +F E+ + H N
Sbjct: 20 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 383 VVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+V G C+ RR LI E++ GSL ++ ++ I++ KL LQ I +G+
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGM 134
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYI 499
EYL + R +H D+ NIL++ + KI DFGL K+ + KE + +
Sbjct: 135 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 191
Query: 500 APE 502
APE
Sbjct: 192 APE 194
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 28/222 (12%)
Query: 317 RYSYADIKKMTNS---FKYKLGQGGYGSVYKGKLIDGS------NVAVKVLNDSKGNG-- 365
++ A +K+++ S F +LG+ +G VYKG L + VA+K L D K G
Sbjct: 14 QHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD-KAEGPL 72
Query: 366 -EEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNS-----SSI 419
EEF +E +R H NVV LLG + + ++I+ + S+G L +F+ S S
Sbjct: 73 REEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGST 132
Query: 420 ENHKLTWETL-----LQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDF 474
++ + L + + IA G+EYL S ++H D+ N+L+ + KISD
Sbjct: 133 DDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDL 189
Query: 475 GLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSD 516
GL + + + + + ++APE G+ S SD
Sbjct: 190 GLFREVYAADYYKLLGNSLLPIRWMAPEAIM--YGKFSIDSD 229
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 329 SFKYKLGQGGYGSVYKGK---LID--GSNVAVKVLNDS-KGNGEEFINEVASISRTSHVN 382
F +LG+G +GSV + L D G VAVK L S + + +F E+ + H N
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 383 VVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+V G C+ RR LI E++ GSL ++ ++ I++ KL LQ I +G+
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGM 127
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYI 499
EYL + R +H D+ NIL++ + KI DFGL K+ + KE + +
Sbjct: 128 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 500 APE 502
APE
Sbjct: 185 APE 187
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 329 SFKYKLGQGGYGSVYKGK---LID--GSNVAVKVLNDS-KGNGEEFINEVASISRTSHVN 382
F +LG+G +GSV + L D G VAVK L S + + +F E+ + H N
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 383 VVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+V G C+ RR LI E++ GSL ++ ++ I++ KL LQ I +G+
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGM 145
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYI 499
EYL + R +H D+ NIL++ + KI DFGL K+ + KE + +
Sbjct: 146 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 500 APE 502
APE
Sbjct: 203 APE 205
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 17/180 (9%)
Query: 334 LGQGGYGSVYKGKL-IDGSN---VAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G G G V G+L + G VA+K L ++ +F++E + + + H N++ L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYL-HLG 446
G GR ++ E++ NGSL+ F+ + + T L+ + G+ G+ YL LG
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFL-----RTHDGQFTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
+H D+ N+L+D + K+SDFGL+++ + ++ + TG + + + APE
Sbjct: 172 ----YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA 227
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 17/180 (9%)
Query: 334 LGQGGYGSVYKGKL-IDGSN---VAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G G G V G+L + G VA+K L ++ +F++E + + + H N++ L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYL-HLG 446
G GR ++ E++ NGSL+ F+ + + T L+ + G+ G+ YL LG
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFL-----RTHDGQFTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
+H D+ N+L+D + K+SDFGL+++ + ++ + TG + + + APE
Sbjct: 172 ----YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA 227
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 20/191 (10%)
Query: 329 SFKYKLGQGGYGSVYK------GKLIDGSNVAVKVLNDSK--GNGEEFINEVASISRT-S 379
F LG G +G V + GK VAVK+L + E ++E+ +S
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIE--------NHKLTWETLLQ 431
H N+V LLG C G +I E+ G L F+ R S +E N L+ LL
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 432 IAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTG 491
+ +A+G+ +L S +H D+ N+LL KI DFGLA+ + I
Sbjct: 169 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 492 ARGTVGYIAPE 502
AR V ++APE
Sbjct: 226 ARLPVKWMAPE 236
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 329 SFKYKLGQGGYGSVYKGK---LID--GSNVAVKVLNDS-KGNGEEFINEVASISRTSHVN 382
F +LG+G +GSV + L D G VAVK L S + + +F E+ + H N
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 383 VVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+V G C+ RR LI E++ GSL ++ ++ I++ KL LQ I +G+
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGM 145
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYI 499
EYL + R +H D+ NIL++ + KI DFGL K+ + KE + +
Sbjct: 146 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 500 APE 502
APE
Sbjct: 203 APE 205
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 27/179 (15%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFEG 393
+G+G +G V K K +VA+K + +S+ + FI E+ +SR +H N+V L G C
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQI-ESESERKAFIVELRQLSRVNHPNIVKLYGACL-- 72
Query: 394 RRRALIYEFVSNGSL-------EKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
L+ E+ GSL E Y ++ H ++W LQ + G+A YLH
Sbjct: 73 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAA----HAMSW--CLQCSQGVA----YLHSM 122
Query: 447 CSTRILHFDIKPHNILLDE-DFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
++H D+KP N+LL KI DFG A C+ + MT +G+ ++APEVF
Sbjct: 123 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTA--CDIQ---THMTNNKGSAAWMAPEVF 176
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ + L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLSFCH---S 121
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILL 176
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 312 SLAPRRYSYADIKKMTN---SFKYKLGQGGYGSVYKGKLIDGSN------VAVKVLND-- 360
S A + S +D+K++ + LG G +G VY+G++ N VAVK L +
Sbjct: 14 SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 73
Query: 361 SKGNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRN-SSSI 419
S+ + +F+ E IS+ +H N+V +G + R ++ E ++ G L+ F+
Sbjct: 74 SEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 420 ENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP------KISD 473
+ L LL +A IA G +YL +H DI N LL CP KI D
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---CPGPGRVAKIGD 187
Query: 474 FGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
FG+A+ R A V ++ PE F I
Sbjct: 188 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 222
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ + L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 121
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILL 176
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ + L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 120
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILL 175
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFEG 393
+G+G +G V K K +VA+K + +S+ + FI E+ +SR +H N+V L G C
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQI-ESESERKAFIVELRQLSRVNHPNIVKLYGACL-- 71
Query: 394 RRRALIYEFVSNGSLEKFIYRNSS---SIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
L+ E+ GSL ++ H ++W LQ + G+A YLH
Sbjct: 72 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW--CLQCSQGVA----YLHSMQPKA 125
Query: 451 ILHFDIKPHNILLDE-DFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
++H D+KP N+LL KI DFG A C+ + MT +G+ ++APEVF
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTA--CDIQ---THMTNNKGSAAWMAPEVF 175
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 329 SFKYKLGQGGYGSVYKGK---LID--GSNVAVKVLNDS-KGNGEEFINEVASISRTSHVN 382
F +LG+G +GSV + L D G VAVK L S + + +F E+ + H N
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 383 VVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+V G C+ RR LI E++ GSL ++ ++ I++ KL LQ I +G+
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGM 127
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYI 499
EYL + R +H D+ NIL++ + KI DFGL K+ + KE + +
Sbjct: 128 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY 184
Query: 500 APE 502
APE
Sbjct: 185 APE 187
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ + L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 120
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILL 175
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 74 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 125
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILL 180
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 329 SFKYKLGQGGYGSVYKGK---LID--GSNVAVKVLNDS-KGNGEEFINEVASISRTSHVN 382
F +LG+G +GSV + L D G VAVK L S + + +F E+ + H N
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 383 VVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+V G C+ RR LI E++ GSL ++ ++ I++ KL LQ I +G+
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL-----LQYTSQICKGM 130
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR-KESIISMTGARGTVGYI 499
EYL + R +H D+ NIL++ + KI DFGL K+ + KE + +
Sbjct: 131 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 500 APE 502
APE
Sbjct: 188 APE 190
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 70 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 121
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILL 176
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 77 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 128
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILL 183
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 77 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 128
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILL 183
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 70 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 121
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILL 176
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 71 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 122
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILL 177
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 20/190 (10%)
Query: 334 LGQGGYGSVYKG------KLIDGSNVAVKVLNDSKGNGEE--FINEVASISRTSH-VNVV 384
LG+G +G V + K VAVK+L + + E ++E+ + H +NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 385 TLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHK------LTWETLLQIAVGIA 437
LLG C + G +I EF G+L ++ + +K LT E L+ + +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 438 RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVG 497
+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR +
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 498 YIAPE-VFCR 506
++APE +F R
Sbjct: 212 WMAPETIFDR 221
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 89/195 (45%), Gaps = 26/195 (13%)
Query: 335 GQGGYGSVYKGKLIDGSNVAVKV--LNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE 392
+G +G V+K +L++ VAVK+ + D + E+ EV S+ H N++ +G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKR 89
Query: 393 GRRRA----LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL--- 445
G LI F GSL F+ N S W L IA +ARGL YLH
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLKANVVS-------WNELCHIAETMARGLAYLHEDIP 142
Query: 446 ----GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
G I H DIK N+LL + I+DFGLA +S G GT Y+AP
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP 202
Query: 502 EVFCRNIGEVSYKSD 516
EV G ++++ D
Sbjct: 203 EVLE---GAINFQRD 214
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 330 FKYKLGQGGYGSVYKGKLIDGS------NVAVKVLNDSKGNG---EEFINEVASISRTSH 380
F +LG+ +G VYKG L + VA+K L D K G EEF +E +R H
Sbjct: 13 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD-KAEGPLREEFRHEAMLRARLQH 71
Query: 381 VNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNS-----SSIENHKLTWETL-----L 430
NVV LLG + + ++I+ + S+G L +F+ S S ++ + L +
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 431 QIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMT 490
+ IA G+EYL S ++H D+ N+L+ + KISD GL + + +
Sbjct: 132 HLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 491 GARGTVGYIAPEVFCRNIGEVSYKSD 516
+ + ++APE G+ S SD
Sbjct: 189 NSLLPIRWMAPEAIM--YGKFSIDSD 212
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 11/184 (5%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE 392
+LG G +G V+ G + VA+K L + E F+ E + + H +V L E
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 393 GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRIL 452
++ E+++ GSL F+ E L L+ +A +A G+ Y+ +
Sbjct: 76 -EPIYIVTEYMNKGSLLDFLKDG----EGRALKLPNLVDMAAQVAAGMAYIE---RMNYI 127
Query: 453 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 512
H D++ NIL+ KI+DFGLA++ E + GA+ + + APE G +
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEX-TARQGAKFPIKWTAPEAAL--YGRFT 184
Query: 513 YKSD 516
KSD
Sbjct: 185 IKSD 188
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 103/220 (46%), Gaps = 37/220 (16%)
Query: 314 APRRYSYADIKKMTNSFKYKLGQGGYGSVYKG------KLIDGSNVAVKVLNDSKGNGEE 367
PR DI+ + + F+ LG G + V KL+ +A + L +G+ E
Sbjct: 7 GPRWKQAEDIRDIYD-FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME- 64
Query: 368 FINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWE 427
NE+A + + H N+V L G LI + VS G L I +E T
Sbjct: 65 --NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI------VEKGFYTER 116
Query: 428 TLLQIAVGIARGLEYLH-LGCSTRILHFDIKPHNIL---LDEDFCPKISDFGLAKICNRK 483
++ + ++YLH LG I+H D+KP N+L LDED ISDFGL+K+ +
Sbjct: 117 DASRLIFQVLDAVKYLHDLG----IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 172
Query: 484 ESIISMTGARGTVGYIAPEVF----------CRNIGEVSY 513
S++S A GT GY+APEV C +IG ++Y
Sbjct: 173 -SVLST--ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 312 SLAPRRYSYADIKKMTN---SFKYKLGQGGYGSVYKGKLIDGSN------VAVKVLND-- 360
S A + S +D+K++ + LG G +G VY+G++ N VAVK L +
Sbjct: 14 SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 73
Query: 361 SKGNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRN-SSSI 419
S+ + +F+ E IS+ +H N+V +G + R ++ E ++ G L+ F+
Sbjct: 74 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 420 ENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP------KISD 473
+ L LL +A IA G +YL +H DI N LL CP KI D
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---CPGPGRVAKIGD 187
Query: 474 FGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
FG+A+ R A V ++ PE F I
Sbjct: 188 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 222
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 103/220 (46%), Gaps = 37/220 (16%)
Query: 314 APRRYSYADIKKMTNSFKYKLGQGGYGSVYKG------KLIDGSNVAVKVLNDSKGNGEE 367
PR DI+ + + F+ LG G + V KL+ +A + L +G+ E
Sbjct: 7 GPRWKQAEDIRDIYD-FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME- 64
Query: 368 FINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWE 427
NE+A + + H N+V L G LI + VS G L I +E T
Sbjct: 65 --NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI------VEKGFYTER 116
Query: 428 TLLQIAVGIARGLEYLH-LGCSTRILHFDIKPHNIL---LDEDFCPKISDFGLAKICNRK 483
++ + ++YLH LG I+H D+KP N+L LDED ISDFGL+K+ +
Sbjct: 117 DASRLIFQVLDAVKYLHDLG----IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 172
Query: 484 ESIISMTGARGTVGYIAPEVF----------CRNIGEVSY 513
S++S A GT GY+APEV C +IG ++Y
Sbjct: 173 -SVLST--ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 103/220 (46%), Gaps = 37/220 (16%)
Query: 314 APRRYSYADIKKMTNSFKYKLGQGGYGSVYKG------KLIDGSNVAVKVLNDSKGNGEE 367
PR DI+ + + F+ LG G + V KL+ +A + L +G+ E
Sbjct: 7 GPRWKQAEDIRDIYD-FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME- 64
Query: 368 FINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWE 427
NE+A + + H N+V L G LI + VS G L I +E T
Sbjct: 65 --NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI------VEKGFYTER 116
Query: 428 TLLQIAVGIARGLEYLH-LGCSTRILHFDIKPHNIL---LDEDFCPKISDFGLAKICNRK 483
++ + ++YLH LG I+H D+KP N+L LDED ISDFGL+K+ +
Sbjct: 117 DASRLIFQVLDAVKYLHDLG----IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 172
Query: 484 ESIISMTGARGTVGYIAPEVF----------CRNIGEVSY 513
S++S A GT GY+APEV C +IG ++Y
Sbjct: 173 -SVLST--ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 209
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 303 IETFLRNHGSLAPRR--YSYADIKKMTN-SFKYKLGQGGYGSVYKGKLIDGS----NVAV 355
+ TF+ H P + + +A TN S +G G +G V G+L S +VA+
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 356 KVLND--SKGNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIY 413
K L ++ +F+ E + + + H N++ L G + + ++ E++ NGSL+ F+
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 414 RNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISD 473
++ + + T L+ + GIA G++YL +H D+ NIL++ + K+SD
Sbjct: 139 KHDA-----QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSD 190
Query: 474 FGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
FGLA++ + E+ + G + + + +PE
Sbjct: 191 FGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 312 SLAPRRYSYADIKKMTN---SFKYKLGQGGYGSVYKGKLIDGSN------VAVKVLND-- 360
S A + S +D+K++ + LG G +G VY+G++ N VAVK L +
Sbjct: 14 SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 73
Query: 361 SKGNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRN-SSSI 419
S+ + +F+ E IS+ +H N+V +G + R ++ E ++ G L+ F+
Sbjct: 74 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 420 ENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP------KISD 473
+ L LL +A IA G +YL +H DI N LL CP KI D
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---CPGPGRVAKIGD 187
Query: 474 FGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
FG+A+ R A V ++ PE F I
Sbjct: 188 FGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 222
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 334 LGQGGYGSVYKG------KLIDGSNVAVKVLNDSKGNGEE--FINEVASISRTSH-VNVV 384
LG+G +G V + K VAVK+L + + E ++E+ + H +NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 385 TLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHK--------LTWETLLQIAVG 435
LLG C + G +I EF G+L ++ + +K LT E L+ +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 495
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 496 VGYIAPEVF 504
+ ++APE
Sbjct: 214 LKWMAPETI 222
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 24/188 (12%)
Query: 333 KLGQGGYGSVYKGKLID--GSNVA---VKVLNDSKGNGEEFINEVASISRTS---HVNVV 384
++G+G YG V+K + + G VA V+V +G I EVA + H NVV
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 385 TLLGFCFEGR-----RRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
L C R + L++E V + L ++ + + ET+ + + RG
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL----DKVPEPGVPTETIKDMMFQLLRG 132
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYI 499
L++LH S R++H D+KP NIL+ K++DFGLA+I + + +++T T+ Y
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYR 186
Query: 500 APEVFCRN 507
APEV ++
Sbjct: 187 APEVLLQS 194
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 17/180 (9%)
Query: 334 LGQGGYGSVYKGKL-IDGSN---VAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G G +G V G L + G VA+K L ++ +F++E + + + H NV+ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G + +I EF+ NGSL+ F+ +N + + T L+ + GIA G++YL
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQN-----DGQFTVIQLVGMLRGIAAGMKYL---A 152
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG---TVGYIAPEVF 504
+H D+ NIL++ + K+SDFGL++ S + T A G + + APE
Sbjct: 153 DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 212
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLG G +G V+ + VAVK + + E F+ E + H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 70
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L + +I EF++ GSL F+ S E K L+ + IA G+
Sbjct: 71 KLVKLHAVVTK-EPIYIITEFMAKGSLLDFL----KSDEGSKQPLPKLIDFSAQIAEGMA 125
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
++ +H D++ NIL+ KI+DFGLA++ E + GA+ + + AP
Sbjct: 126 FIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAP 181
Query: 502 EVFCRNIGEVSYKSD 516
E N G + KSD
Sbjct: 182 EAI--NFGSFTIKSD 194
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 312 SLAPRRYSYADIKKMTN---SFKYKLGQGGYGSVYKGKLIDGSN------VAVKVLND-- 360
S A + S +D+K++ + LG G +G VY+G++ N VAVK L +
Sbjct: 20 SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 79
Query: 361 SKGNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRN-SSSI 419
S+ + +F+ E IS+ +H N+V +G + R ++ E ++ G L+ F+
Sbjct: 80 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 139
Query: 420 ENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP------KISD 473
+ L LL +A IA G +YL +H DI N LL CP KI D
Sbjct: 140 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---CPGPGRVAKIGD 193
Query: 474 FGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
FG+A+ R A V ++ PE F I
Sbjct: 194 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 228
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 312 SLAPRRYSYADIKKMTN---SFKYKLGQGGYGSVYKGKLIDGSN------VAVKVLND-- 360
S A + S +D+K++ + LG G +G VY+G++ N VAVK L +
Sbjct: 40 SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 99
Query: 361 SKGNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRN-SSSI 419
S+ + +F+ E IS+ +H N+V +G + R ++ E ++ G L+ F+
Sbjct: 100 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 159
Query: 420 ENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP------KISD 473
+ L LL +A IA G +YL +H DI N LL CP KI D
Sbjct: 160 QPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---CPGPGRVAKIGD 213
Query: 474 FGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
FG+A+ R A V ++ PE F I
Sbjct: 214 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 248
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 22/190 (11%)
Query: 334 LGQGGYGSVYKGKL--IDGS----NVAVKVLNDSKGNGEE--FINEVASISRTSH-VNVV 384
LG+G +G V + ID + VAVK+L + + E ++E+ + H +NVV
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 385 TLLGFCFE-GRRRALIYEFVSNGSLEKFI---------YRNSSSIENHKLTWETLLQIAV 434
LLG C + G +I EF G+L ++ Y+ + LT E L+ +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 435 GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG 494
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 495 TVGYIAPEVF 504
+ ++APE
Sbjct: 213 PLKWMAPETI 222
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 24/188 (12%)
Query: 333 KLGQGGYGSVYKGKLID--GSNVA---VKVLNDSKGNGEEFINEVASISRTS---HVNVV 384
++G+G YG V+K + + G VA V+V +G I EVA + H NVV
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 385 TLLGFCFEGR-----RRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
L C R + L++E V + L ++ + + ET+ + + RG
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL----DKVPEPGVPTETIKDMMFQLLRG 132
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYI 499
L++LH S R++H D+KP NIL+ K++DFGLA+I + + +++T T+ Y
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYR 186
Query: 500 APEVFCRN 507
APEV ++
Sbjct: 187 APEVLLQS 194
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 24/188 (12%)
Query: 333 KLGQGGYGSVYKGKLID--GSNVA---VKVLNDSKGNGEEFINEVASISRTS---HVNVV 384
++G+G YG V+K + + G VA V+V +G I EVA + H NVV
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 385 TLLGFCFEGR-----RRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
L C R + L++E V + L ++ + + ET+ + + RG
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL----DKVPEPGVPTETIKDMMFQLLRG 132
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYI 499
L++LH S R++H D+KP NIL+ K++DFGLA+I + + +++T T+ Y
Sbjct: 133 LDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYR 186
Query: 500 APEVFCRN 507
APEV ++
Sbjct: 187 APEVLLQS 194
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 93/177 (52%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVA---VKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA +++ +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ + L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 121
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILL 176
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 22/201 (10%)
Query: 311 GSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGK---LID--GSNVAVKVLNDS-KGN 364
GS P ++ +K F +LG+G +GSV + L D G VAVK L S + +
Sbjct: 1 GSRDPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 55
Query: 365 GEEFINEVASISRTSHVNVVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENH 422
+F E+ + H N+V G C+ RR LI E++ GSL ++ ++ I++
Sbjct: 56 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 115
Query: 423 KLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR 482
KL LQ I +G+EYL + R +H ++ NIL++ + KI DFGL K+ +
Sbjct: 116 KL-----LQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQ 167
Query: 483 -KESIISMTGARGTVGYIAPE 502
KE + + APE
Sbjct: 168 DKEYYKVKEPGESPIFWYAPE 188
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 93/177 (52%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVA---VKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA +++ +++G I E++ + +H N+V LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ + L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 120
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILL 175
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 314 APRRYSYADIKKMTN---SFKYKLGQGGYGSVYKGKLIDGSN------VAVKVLND--SK 362
A + S +D+K++ + LG G +G VY+G++ N VAVK L + S+
Sbjct: 30 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE 89
Query: 363 GNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRN-SSSIEN 421
+ +F+ E IS+ +H N+V +G + R ++ E ++ G L+ F+ +
Sbjct: 90 QDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP 149
Query: 422 HKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP------KISDFG 475
L LL +A IA G +YL +H DI N LL CP KI DFG
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFG 203
Query: 476 LAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
+A+ R A V ++ PE F I
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 236
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+S L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 73 VIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 124
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 125 HRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 179
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 11/195 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLG G +G V+ + VAVK + + E F+ E + H
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 243
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L + +I EF++ GSL F+ S E K L+ + IA G+
Sbjct: 244 KLVKLHAVVTK-EPIYIITEFMAKGSLLDFL----KSDEGSKQPLPKLIDFSAQIAEGMA 298
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
++ +H D++ NIL+ KI+DFGLA++ E + GA+ + + AP
Sbjct: 299 FIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAP 354
Query: 502 EVFCRNIGEVSYKSD 516
E N G + KSD
Sbjct: 355 EAI--NFGSFTIKSD 367
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+S L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 71 VIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 122
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 177
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 303 IETFLRNHGSLAPRR--YSYADIKKMTN-SFKYKLGQGGYGSVYKGKLIDGS----NVAV 355
+ TF+ H P + + +A TN S +G G +G V G+L S +VA+
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 356 KVLND--SKGNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIY 413
K L ++ +F+ E + + + H N++ L G + + ++ E++ NGSL+ F+
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 414 RNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISD 473
++ + + T L+ + GIA G++YL +H D+ NIL++ + K+SD
Sbjct: 139 KHDA-----QFTVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSD 190
Query: 474 FGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
FGL+++ + E+ + G + + + +PE
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 303 IETFLRNHGSLAPRR--YSYADIKKMTN-SFKYKLGQGGYGSVYKGKLIDGS----NVAV 355
+ TF+ H P + + +A TN S +G G +G V G+L S +VA+
Sbjct: 19 LRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 356 KVLND--SKGNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIY 413
K L ++ +F+ E + + + H N++ L G + + ++ E++ NGSL+ F+
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 414 RNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISD 473
++ + + T L+ + GIA G++YL +H D+ NIL++ + K+SD
Sbjct: 139 KHDA-----QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSD 190
Query: 474 FGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
FGL+++ + E+ + G + + + +PE
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 314 APRRYSYADIKKMTN---SFKYKLGQGGYGSVYKGKLIDGSN------VAVKVLND--SK 362
A + S +D+K++ + LG G +G VY+G++ N VAVK L + S+
Sbjct: 7 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE 66
Query: 363 GNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRN-SSSIEN 421
+ +F+ E IS+ +H N+V +G + R ++ E ++ G L+ F+ +
Sbjct: 67 QDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP 126
Query: 422 HKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP------KISDFG 475
L LL +A IA G +YL +H DI N LL CP KI DFG
Sbjct: 127 SSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFG 180
Query: 476 LAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
+A+ R A V ++ PE F I
Sbjct: 181 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 213
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 314 APRRYSYADIKKMTN---SFKYKLGQGGYGSVYKGKLIDGSN------VAVKVLND--SK 362
A + S +D+K++ + LG G +G VY+G++ N VAVK L + S+
Sbjct: 30 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE 89
Query: 363 GNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRN-SSSIEN 421
+ +F+ E IS+ +H N+V +G + R ++ E ++ G L+ F+ +
Sbjct: 90 QDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQP 149
Query: 422 HKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP------KISDFG 475
L LL +A IA G +YL +H DI N LL CP KI DFG
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFG 203
Query: 476 LAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
+A+ R A V ++ PE F I
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 236
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 314 APRRYSYADIKKMTN---SFKYKLGQGGYGSVYKGKLIDGSN------VAVKVLND--SK 362
A + S +D+K++ + LG G +G VY+G++ N VAVK L + S+
Sbjct: 15 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE 74
Query: 363 GNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRN-SSSIEN 421
+ +F+ E IS+ +H N+V +G + R ++ E ++ G L+ F+ +
Sbjct: 75 QDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQP 134
Query: 422 HKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP------KISDFG 475
L LL +A IA G +YL +H DI N LL CP KI DFG
Sbjct: 135 SSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFG 188
Query: 476 LAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
+A+ R A V ++ PE F I
Sbjct: 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 221
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 314 APRRYSYADIKKMTN---SFKYKLGQGGYGSVYKGKLIDGSN------VAVKVLND--SK 362
A + S +D+K++ + LG G +G VY+G++ N VAVK L + S+
Sbjct: 15 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE 74
Query: 363 GNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRN-SSSIEN 421
+ +F+ E IS+ +H N+V +G + R ++ E ++ G L+ F+ +
Sbjct: 75 QDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP 134
Query: 422 HKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP------KISDFG 475
L LL +A IA G +YL +H DI N LL CP KI DFG
Sbjct: 135 SSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFG 188
Query: 476 LAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
+A+ R A V ++ PE F I
Sbjct: 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 221
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 19/187 (10%)
Query: 334 LGQGGYGSVYKG------KLIDGSNVAVKVLNDSKGNGEE--FINEVASISRTSH-VNVV 384
LG+G +G V + K VAVK+L + + E ++E+ + H +NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 385 TLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHK------LTWETLLQIAVGIA 437
LLG C + G +I EF G+L ++ + +K LT E L+ + +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 438 RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVG 497
+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR +
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 498 YIAPEVF 504
++APE
Sbjct: 212 WMAPETI 218
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 24/190 (12%)
Query: 330 FKYKLGQGGYGSVYKGKLI-DG--SNVAVKVLND--SKGNGEEFINEVASISRTSH-VNV 383
F+ +G+G +G V K ++ DG + A+K + + SK + +F E+ + + H N+
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 384 VTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENH-----------KLTWETLLQI 432
+ LLG C L E+ +G+L F+ R S +E L+ + LL
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQLLHF 137
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
A +ARG++YL + +H D+ NIL+ E++ KI+DFGL++ +E + T
Sbjct: 138 AADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMG 191
Query: 493 RGTVGYIAPE 502
R V ++A E
Sbjct: 192 RLPVRWMAIE 201
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 334 LGQGGYGSVYKGKL-IDGSN---VAVKVLNDSKGNGE--EFINEVASISRTSHVNVVTLL 387
+G G +G V G+L + G VA+K L + + +F++E + + + H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G + + +I E++ NGSL+ F+ +N + + T L+ + GI G++YL
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKN-----DGRFTVIQLVGMLRGIGSGMKYL---S 148
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
+H D+ NIL++ + K+SDFG++++ + E+ + G + + + APE
Sbjct: 149 DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 207
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 84/191 (43%), Gaps = 20/191 (10%)
Query: 329 SFKYKLGQGGYGSVYK------GKLIDGSNVAVKVLNDSK--GNGEEFINEVASISRT-S 379
F LG G +G V + GK VAVK+L + E ++E+ +S
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIE--------NHKLTWETLLQ 431
H N+V LLG C G +I E+ G L F+ R S +E N + LL
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 432 IAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTG 491
+ +A+G+ +L S +H D+ N+LL KI DFGLA+ + I
Sbjct: 169 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 492 ARGTVGYIAPE 502
AR V ++APE
Sbjct: 226 ARLPVKWMAPE 236
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 24/190 (12%)
Query: 330 FKYKLGQGGYGSVYKGKLI-DG--SNVAVKVLND--SKGNGEEFINEVASISRTSH-VNV 383
F+ +G+G +G V K ++ DG + A+K + + SK + +F E+ + + H N+
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 384 VTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENH-----------KLTWETLLQI 432
+ LLG C L E+ +G+L F+ R S +E L+ + LL
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
A +ARG++YL + +H D+ NIL+ E++ KI+DFGL++ +E + T
Sbjct: 148 AADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMG 201
Query: 493 RGTVGYIAPE 502
R V ++A E
Sbjct: 202 RLPVRWMAIE 211
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 314 APRRYSYADIKKMTN---SFKYKLGQGGYGSVYKGKLIDGSN------VAVKVLND--SK 362
A + S +D+K++ + LG G +G VY+G++ N VAVK L + S+
Sbjct: 32 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE 91
Query: 363 GNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRN-SSSIEN 421
+ +F+ E IS+ +H N+V +G + R ++ E ++ G L+ F+ +
Sbjct: 92 QDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP 151
Query: 422 HKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP------KISDFG 475
L LL +A IA G +YL +H DI N LL CP KI DFG
Sbjct: 152 SSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFG 205
Query: 476 LAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
+A+ R A V ++ PE F I
Sbjct: 206 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 238
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 303 IETFLRNHGSLAPRR--YSYADIKKMTN-SFKYKLGQGGYGSVYKGKLIDGS----NVAV 355
+ TF+ H P + + +A TN S +G G +G V G+L S +VA+
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 356 KVLND--SKGNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIY 413
K L ++ +F+ E + + + H N++ L G + + ++ E++ NGSL+ F+
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 414 RNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISD 473
++ + + T L+ + GIA G++YL +H D+ NIL++ + K+SD
Sbjct: 139 KHDA-----QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSD 190
Query: 474 FGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
FGL+++ + E+ + G + + + +PE
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 334 LGQGGYGSVYKGKL-IDGSN---VAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G G +G V G+L + G VA+K L ++ +F+ E + + + H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G + + ++ E++ NGSL+ F+ +N + + T L+ + GI+ G++YL
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKN-----DGQFTVIQLVGMLRGISAGMKYL---S 141
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
+H D+ NIL++ + K+SDFGL+++ + E+ + G + + + APE
Sbjct: 142 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 200
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 16/188 (8%)
Query: 334 LGQGGYGSVYKGKLI--DGS--NVAVKVLND---SKGNGEEFINEVASISRTSHVNVVTL 386
LG+G +GSV + +L DGS VAVK+L + + EEF+ E A + H +V L
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 387 LGFCFEGRRRA------LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+G R + +I F+ +G L F+ + L +TL++ V IA G+
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 500
EYL S +H D+ N +L ED ++DFGL++ + ++ V ++A
Sbjct: 151 EYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 501 PEVFCRNI 508
E N+
Sbjct: 208 LESLADNL 215
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ + L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 121
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 176
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 314 APRRYSYADIKKMTN---SFKYKLGQGGYGSVYKGKLIDGSN------VAVKVLND--SK 362
A + S +D+K++ + LG G +G VY+G++ N VAVK L + S+
Sbjct: 30 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSE 89
Query: 363 GNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRN-SSSIEN 421
+ +F+ E IS+ +H N+V +G + R ++ E ++ G L+ F+ +
Sbjct: 90 QDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP 149
Query: 422 HKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP------KISDFG 475
L LL +A IA G +YL +H DI N LL CP KI DFG
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFG 203
Query: 476 LAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
+A+ R A V ++ PE F I
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI 236
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 73 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 124
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 179
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 72 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 123
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 178
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ + L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 121
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 176
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 87/191 (45%), Gaps = 17/191 (8%)
Query: 319 SYADIKKMTNSFKYKLGQGGYGSVYKG-KLIDGSNVAVKVLN-DSKGNGEEFINEVASIS 376
S D KK F+ K+GQG G+VY + G VA++ +N + E INE+ +
Sbjct: 14 SVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMR 72
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
+ N+V L G ++ E+++ GSL + LQ
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----- 127
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGL-AKICNRKESIISMTGARGT 495
LE+LH S +++H DIK NILL D K++DFG A+I + +M GT
Sbjct: 128 --ALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GT 179
Query: 496 VGYIAPEVFCR 506
++APEV R
Sbjct: 180 PYWMAPEVVTR 190
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 73 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 124
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 179
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 69 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 120
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 175
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ + L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 120
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 175
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ + L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 121
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 176
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 70 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 121
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 176
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 71 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 122
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 177
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 72 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 123
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 178
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 71 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 122
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 177
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 303 IETFLRNHGSLAPRR--YSYADIKKMTN-SFKYKLGQGGYGSVYKGKLIDGS----NVAV 355
+ TF+ H P + + +A TN S +G G +G V G+L S +VA+
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 356 KVLND--SKGNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIY 413
K L ++ +F+ E + + + H N++ L G + + ++ E++ NGSL+ F+
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 414 RNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISD 473
++ + + T L+ + GIA G++YL +H D+ NIL++ + K+SD
Sbjct: 139 KHDA-----QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSD 190
Query: 474 FGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
FGL ++ + E+ + G + + + +PE
Sbjct: 191 FGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 74 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 125
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 180
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 334 LGQGGYGSVYKGKLIDGS----NVAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G G +G V G+L S +VA+K L ++ +F+ E + + + H N++ L
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 110
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G + + ++ E++ NGSL+ F+ ++ + + T L+ + GIA G++YL
Sbjct: 111 GVVTKSKPVMIVTEYMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIASGMKYL---S 162
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
+H D+ NIL++ + K+SDFGL+++ + E+ + G + + + +PE
Sbjct: 163 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 221
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 334 LGQGGYGSVYKGKLIDGS----NVAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G G +G V G+L S +VA+K L ++ +F+ E + + + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G + + ++ E++ NGSL+ F+ ++ + + T L+ + GIA G++YL
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIASGMKYL---S 164
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
+H D+ NIL++ + K+SDFGL+++ + E+ + G + + + +PE
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 72 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 123
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 124 HRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 178
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 71 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 122
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 177
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 334 LGQGGYGSVYKGKL-IDGSN---VAVKVLNDSKGNGE--EFINEVASISRTSHVNVVTLL 387
+G G +G V G+L + G VA+K L + + +F++E + + + H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G + + +I E++ NGSL+ F+ +N + + T L+ + GI G++YL
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKN-----DGRFTVIQLVGMLRGIGSGMKYL---S 127
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
+H D+ NIL++ + K+SDFG++++ + E+ + G + + + APE
Sbjct: 128 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 186
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 334 LGQGGYGSVYKGKL-IDGSN---VAVKVLNDSKGNGE--EFINEVASISRTSHVNVVTLL 387
+G G +G V G+L + G VA+K L + + +F++E + + + H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G + + +I E++ NGSL+ F+ +N + + T L+ + GI G++YL
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKN-----DGRFTVIQLVGMLRGIGSGMKYL---S 133
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
+H D+ NIL++ + K+SDFG++++ + E+ + G + + + APE
Sbjct: 134 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 192
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 334 LGQGGYGSVYKGKLIDGS----NVAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G G +G V G+L S +VA+K L ++ +F+ E + + + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G + + ++ E++ NGSL+ F+ ++ + + T L+ + GIA G++YL
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIASGMKYL---S 164
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
+H D+ NIL++ + K+SDFGL+++ + E+ + G + + + +PE
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 314 APRRYSYADIKKMTN---SFKYKLGQGGYGSVYKGKLIDGSN------VAVKVLND--SK 362
A + S +D+K++ + LG G +G VY+G++ N VAVK L + S+
Sbjct: 56 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE 115
Query: 363 GNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRN-SSSIEN 421
+ +F+ E IS+ +H N+V +G + R ++ E ++ G L+ F+ +
Sbjct: 116 QDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP 175
Query: 422 HKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP------KISDFG 475
L LL +A IA G +YL +H DI N LL CP KI DFG
Sbjct: 176 SSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFG 229
Query: 476 LAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
+A+ R A V ++ PE F I
Sbjct: 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGI 262
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 314 APRRYSYADIKKMTN---SFKYKLGQGGYGSVYKGKLIDGSN------VAVKVLND--SK 362
A + S +D+K++ + LG G +G VY+G++ N VAVK L + S+
Sbjct: 33 AGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE 92
Query: 363 GNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRN-SSSIEN 421
+ +F+ E IS+ +H N+V +G + R ++ E ++ G L+ F+ +
Sbjct: 93 QDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQP 152
Query: 422 HKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP------KISDFG 475
L LL +A IA G +YL +H DI N LL CP KI DFG
Sbjct: 153 SSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLT---CPGPGRVAKIGDFG 206
Query: 476 LAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
+A+ R A V ++ PE F I
Sbjct: 207 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGI 239
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 334 LGQGGYGSVYKGKLI----DGSNVAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G G +G V +G+L S VA+K L ++ EF++E + + + H N++ L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G ++ EF+ NG+L+ F+ N + + T L+ + GIA G+ YL
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLN-----DGQFTVIQLVGMLRGIASGMRYL---A 133
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMT---GARGTVGYIAPEVF 504
+H D+ NIL++ + K+SDFGL++ S + T G + + + APE
Sbjct: 134 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 505 C 505
Sbjct: 194 A 194
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 86/191 (45%), Gaps = 17/191 (8%)
Query: 319 SYADIKKMTNSFKYKLGQGGYGSVYKG-KLIDGSNVAVKVLN-DSKGNGEEFINEVASIS 376
S D KK F+ K+GQG G+VY + G VA++ +N + E INE+ +
Sbjct: 14 SVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMR 72
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
+ N+V L G ++ E+++ GSL + LQ
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----- 127
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGL-AKICNRKESIISMTGARGT 495
LE+LH S +++H DIK NILL D K++DFG A+I + M GT
Sbjct: 128 --ALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV---GT 179
Query: 496 VGYIAPEVFCR 506
++APEV R
Sbjct: 180 PYWMAPEVVTR 190
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 86/191 (45%), Gaps = 17/191 (8%)
Query: 319 SYADIKKMTNSFKYKLGQGGYGSVYKG-KLIDGSNVAVKVLN-DSKGNGEEFINEVASIS 376
S D KK F+ K+GQG G+VY + G VA++ +N + E INE+ +
Sbjct: 14 SVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMR 72
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
+ N+V L G ++ E+++ GSL + LQ
Sbjct: 73 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----- 127
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGL-AKICNRKESIISMTGARGT 495
LE+LH S +++H DIK NILL D K++DFG A+I + M GT
Sbjct: 128 --ALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV---GT 179
Query: 496 VGYIAPEVFCR 506
++APEV R
Sbjct: 180 PYWMAPEVVTR 190
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 19/172 (11%)
Query: 323 IKKMTNSFKYKLGQGGYGSVYKGK---LI---DGSNVAVKVLND-SKGNGEEFINEVASI 375
IK+ K++LG+G +G V+ + L+ D VAVK L + S+ ++F E +
Sbjct: 15 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 74
Query: 376 SRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKF---------IYRNSSSIENHKLTW 426
+ H ++V G C EGR +++E++ +G L +F + + L
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 427 ETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK 478
LL +A +A G+ YL +H D+ N L+ + KI DFG+++
Sbjct: 135 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 183
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 25/184 (13%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSKGNGEEFINEVASISRTS-HVNVVTLLGFCF 391
+G G YG VYKG+ + G A+KV++ + EE E+ + + S H N+ T G
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 392 EGR------RRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
+ + L+ EF GS+ I + + + L E + I I RGL +LH
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLI----KNTKGNTLKEEWIAYICREILRGLSHLH- 146
Query: 446 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAP 501
+++H DIK N+LL E+ K+ DFG++ +R G R GT ++AP
Sbjct: 147 --QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR------TVGRRNTFIGTPYWMAP 198
Query: 502 EVFC 505
EV
Sbjct: 199 EVIA 202
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 19/172 (11%)
Query: 323 IKKMTNSFKYKLGQGGYGSVYKGK---LI---DGSNVAVKVLND-SKGNGEEFINEVASI 375
IK+ K++LG+G +G V+ + L+ D VAVK L + S+ ++F E +
Sbjct: 9 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 68
Query: 376 SRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKF---------IYRNSSSIENHKLTW 426
+ H ++V G C EGR +++E++ +G L +F + + L
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 128
Query: 427 ETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK 478
LL +A +A G+ YL +H D+ N L+ + KI DFG+++
Sbjct: 129 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 177
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+S L+ F+ ++ + L L Q+ +GL + H S
Sbjct: 73 VIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 124
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 179
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 329 SFKYKLGQGGYGSVYK------GKLIDGSNVAVKVLNDSK--GNGEEFINEVASISRT-S 379
F LG G +G V + GK VAVK+L + E ++E+ +S
Sbjct: 41 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 100
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSI----ENHKLTWETLLQIAVG 435
H N+V LLG C G +I E+ G L F+ R + + + L LL +
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 495
+A+G+ +L S +H D+ N+LL KI DFGLA+ + I AR
Sbjct: 161 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 496 VGYIAPE 502
V ++APE
Sbjct: 218 VKWMAPE 224
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFEG 393
+G+G +G V G G+ VAVK + + + F+ E + +++ H N+V LLG E
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 394 RRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRIL 452
+ ++ E+++ GSL ++ S+ L + LL+ ++ + +EYL +
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLE---GNNFV 311
Query: 453 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
H D+ N+L+ ED K+SDFGL KE+ + + V + APE
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEAL 358
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 86/191 (45%), Gaps = 17/191 (8%)
Query: 319 SYADIKKMTNSFKYKLGQGGYGSVYKG-KLIDGSNVAVKVLN-DSKGNGEEFINEVASIS 376
S D KK F+ K+GQG G+VY + G VA++ +N + E INE+ +
Sbjct: 15 SVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMR 73
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
+ N+V L G ++ E+++ GSL + LQ
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----- 128
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGL-AKICNRKESIISMTGARGT 495
LE+LH S +++H DIK NILL D K++DFG A+I + M GT
Sbjct: 129 --ALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV---GT 180
Query: 496 VGYIAPEVFCR 506
++APEV R
Sbjct: 181 PYWMAPEVVTR 191
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 334 LGQGGYGSVYKGKLIDGS----NVAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G G +G V G+L S +VA+K L ++ +F+ E + + + H N++ L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G + + ++ E++ NGSL+ F+ ++ + + T L+ + GIA G++YL
Sbjct: 84 GVVTKSKPVMIVTEYMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIASGMKYL---S 135
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
+H D+ NIL++ + K+SDFGL+++ + E+ + G + + + +PE
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 194
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 303 IETFLRNHGSLAPRR--YSYADIKKMTN-SFKYKLGQGGYGSVYKGKLIDGS----NVAV 355
+ TF+ H P + + +A TN S +G G +G V G+L S +VA+
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 356 KVLND--SKGNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIY 413
K L ++ +F+ E + + + H N++ L G + + ++ E + NGSL+ F+
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR 138
Query: 414 RNSSSIENHKLTWETLLQIAVGIARGLEYL-HLGCSTRILHFDIKPHNILLDEDFCPKIS 472
++ + + T L+ + GIA G++YL +G +H D+ NIL++ + K+S
Sbjct: 139 KHDA-----QFTVIQLVGMLRGIASGMKYLSDMGA----VHRDLAARNILINSNLVCKVS 189
Query: 473 DFGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
DFGL+++ + E+ + G + + + +PE
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+S L+ F+ ++ + L L Q+ +GL + H S
Sbjct: 72 VIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 123
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 178
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 23/191 (12%)
Query: 334 LGQGGYGSVYKGKL--IDGS----NVAVKVLNDSKGNGEE--FINEVASISRTSH-VNVV 384
LG+G +G V + ID + VAVK+L + + E ++E+ + H +NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 385 TLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHK----------LTWETLLQIA 433
LLG C + G +I EF G+L ++ + +K LT E L+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 493
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 494 GTVGYIAPEVF 504
+ ++APE
Sbjct: 212 LPLKWMAPETI 222
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 329 SFKYKLGQGGYGSVYK------GKLIDGSNVAVKVLNDSK--GNGEEFINEVASISRT-S 379
F LG G +G V + GK VAVK+L + E ++E+ +S
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSI----ENHKLTWETLLQIAVG 435
H N+V LLG C G +I E+ G L F+ R + + + L LL +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 495
+A+G+ +L S +H D+ N+LL KI DFGLA+ + I AR
Sbjct: 169 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 496 VGYIAPE 502
V ++APE
Sbjct: 226 VKWMAPE 232
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 334 LGQGGYGSVYKGKLI----DGSNVAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G G +G V +G+L S VA+K L ++ EF++E + + + H N++ L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G ++ EF+ NG+L+ F+ N + + T L+ + GIA G+ YL
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLN-----DGQFTVIQLVGMLRGIASGMRYL---A 135
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMT---GARGTVGYIAPEVF 504
+H D+ NIL++ + K+SDFGL++ S + T G + + + APE
Sbjct: 136 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 505 C 505
Sbjct: 196 A 196
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 334 LGQGGYGSVYKGKLIDGS----NVAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G G +G V G+L S +VA+K L ++ +F+ E + + + H N++ L
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 100
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G + + ++ E++ NGSL+ F+ ++ + + T L+ + GIA G++YL
Sbjct: 101 GVVTKSKPVMIVTEYMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIASGMKYL---S 152
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
+H D+ NIL++ + K+SDFGL+++ + E+ + G + + + +PE
Sbjct: 153 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 211
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 19/185 (10%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVK-VLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE 392
+G+G +G V G G+ VAVK + ND+ + F+ E + +++ H N+V LLG E
Sbjct: 14 IGKGEFGDVMLGD-YRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 393 GRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRI 451
+ ++ E+++ GSL ++ S+ L + LL+ ++ + +EYL
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLE---GNNF 123
Query: 452 LHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEV 511
+H D+ N+L+ ED K+SDFGL KE+ + + V + APE +
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREK--KF 176
Query: 512 SYKSD 516
S KSD
Sbjct: 177 STKSD 181
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 135
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 136 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 507 NI 508
I
Sbjct: 195 RI 196
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 19/172 (11%)
Query: 323 IKKMTNSFKYKLGQGGYGSVYKGK---LI---DGSNVAVKVLND-SKGNGEEFINEVASI 375
IK+ K++LG+G +G V+ + L+ D VAVK L + S+ ++F E +
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 97
Query: 376 SRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKF---------IYRNSSSIENHKLTW 426
+ H ++V G C EGR +++E++ +G L +F + + L
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
Query: 427 ETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK 478
LL +A +A G+ YL +H D+ N L+ + KI DFG+++
Sbjct: 158 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 206
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 23/191 (12%)
Query: 334 LGQGGYGSVYKGKL--IDGS----NVAVKVLNDSKGNGEE--FINEVASISRTSH-VNVV 384
LG+G +G V + ID + VAVK+L + + E ++E+ + H +NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 385 TLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHK----------LTWETLLQIA 433
LLG C + G +I EF G+L ++ + +K LT E L+ +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 493
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 494 GTVGYIAPEVF 504
+ ++APE
Sbjct: 203 LPLKWMAPETI 213
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 84/193 (43%), Gaps = 22/193 (11%)
Query: 329 SFKYKLGQGGYGSVYK------GKLIDGSNVAVKVLNDSK--GNGEEFINEVASISRT-S 379
F LG G +G V + GK VAVK+L + E ++E+ +S
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYR----------NSSSIENHKLTWETL 429
H N+V LLG C G +I E+ G L F+ R N S +L+ L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 430 LQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM 489
L + +A+G+ +L S +H D+ N+LL KI DFGLA+ + I
Sbjct: 169 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 490 TGARGTVGYIAPE 502
AR V ++APE
Sbjct: 226 GNARLPVKWMAPE 238
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++E V + L+ F+ ++ + L L Q+ +GL + H S
Sbjct: 69 VIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 120
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T T+ Y APE+
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILL 175
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 19/185 (10%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVK-VLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE 392
+G+G +G V G G+ VAVK + ND+ + F+ E + +++ H N+V LLG E
Sbjct: 29 IGKGEFGDVMLGD-YRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 393 GRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRI 451
+ ++ E+++ GSL ++ S+ L + LL+ ++ + +EYL
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLE---GNNF 138
Query: 452 LHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEV 511
+H D+ N+L+ ED K+SDFGL KE+ + + V + APE +
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREK--KF 191
Query: 512 SYKSD 516
S KSD
Sbjct: 192 STKSD 196
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 90/177 (50%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++E V L+KF+ ++ + L L Q+ +GL + H S
Sbjct: 73 VIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 124
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 179
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 23/191 (12%)
Query: 334 LGQGGYGSVYKGKL--IDGS----NVAVKVLNDSKGNGEE--FINEVASISRTSH-VNVV 384
LG+G +G V + ID + VAVK+L + + E ++E+ + H +NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 385 TLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHK----------LTWETLLQIA 433
LLG C + G +I EF G+L ++ + +K LT E L+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 493
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 494 GTVGYIAPEVF 504
+ ++APE
Sbjct: 203 LPLKWMAPETI 213
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 17/173 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVK-VLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE 392
+G+G +G V G G+ VAVK + ND+ + F+ E + +++ H N+V LLG E
Sbjct: 20 IGKGEFGDVMLGD-YRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 393 GRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRI 451
+ ++ E+++ GSL ++ S+ L + LL+ ++ + +EYL
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLE---GNNF 129
Query: 452 LHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
+H D+ N+L+ ED K+SDFGL KE+ + + V + APE
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEAL 177
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 23/191 (12%)
Query: 334 LGQGGYGSVYKGKL--IDGS----NVAVKVLNDSKGNGEE--FINEVASISRTSH-VNVV 384
LG+G +G V + ID + VAVK+L + + E ++E+ + H +NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 385 TLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHK----------LTWETLLQIA 433
LLG C + G +I EF G+L ++ + +K LT E L+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 493
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 494 GTVGYIAPEVF 504
+ ++APE
Sbjct: 212 LPLKWMAPETI 222
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 23/191 (12%)
Query: 334 LGQGGYGSVYKGKL--IDGS----NVAVKVLNDSKGNGEE--FINEVASISRTSH-VNVV 384
LG+G +G V + ID + VAVK+L + + E ++E+ + H +NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 385 TLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHK----------LTWETLLQIA 433
LLG C + G +I EF G+L ++ + +K LT E L+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 493
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 494 GTVGYIAPEVF 504
+ ++APE
Sbjct: 212 LPLKWMAPETI 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 134
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 507 NI 508
I
Sbjct: 194 RI 195
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 101/232 (43%), Gaps = 33/232 (14%)
Query: 293 SYDSTGSCLNIETFLRNHGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GS 351
S D GS + G P+ SY D K +G G +G VY+ KL D G
Sbjct: 14 SRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGE 65
Query: 352 NVAVK-VLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSLE 409
VA+K VL D + E + + + H N+V L F + G ++ +Y + +
Sbjct: 66 LVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 121
Query: 410 KFIYRNSSSIENHKLTWETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILLD 464
+ +YR + K +TL I V + R L Y+H S I H DIKP N+LLD
Sbjct: 122 ETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLD 175
Query: 465 EDFCP-KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
D K+ DFG AK R E +S +R Y APE+ G Y S
Sbjct: 176 PDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI---FGATDYTS 221
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 134
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 507 NI 508
I
Sbjct: 194 RI 195
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 135
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 136 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 507 NI 508
I
Sbjct: 195 RI 196
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 24/190 (12%)
Query: 330 FKYKLGQGGYGSVYKGKLI-DG--SNVAVKVLND--SKGNGEEFINEVASISRTSH-VNV 383
F+ +G+G +G V K ++ DG + A+K + + SK + +F E+ + + H N+
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 384 VTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENH-----------KLTWETLLQI 432
+ LLG C L E+ +G+L F+ R S +E L+ + LL
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQLLHF 144
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
A +ARG++YL + +H ++ NIL+ E++ KI+DFGL++ +E + T
Sbjct: 145 AADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMG 198
Query: 493 RGTVGYIAPE 502
R V ++A E
Sbjct: 199 RLPVRWMAIE 208
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 98/212 (46%), Gaps = 36/212 (16%)
Query: 311 GSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLI-DGSNVAVKVLNDSKGNGEEF- 368
GS+A RY ++G G YG+VYK + G VA+K + G G
Sbjct: 4 GSMATSRYEPV----------AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGG 53
Query: 369 -----INEVASISRTS---HVNVVTLLGFCFEGR-----RRALIYEFVSNGSLEKFIYRN 415
+ EVA + R H NVV L+ C R + L++E V L ++ +
Sbjct: 54 LPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKA 112
Query: 416 SSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFG 475
L ET+ + RGL++LH C I+H D+KP NIL+ K++DFG
Sbjct: 113 PPP----GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFG 165
Query: 476 LAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
LA+I + + +++T T+ Y APEV ++
Sbjct: 166 LARIYSYQ---MALTPVVVTLWYRAPEVLLQS 194
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 40/191 (20%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE 392
+G GG+G V+K K IDG +K + K N E+ EV ++++ HVN+V G C++
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRV---KYNNEKAEREVKALAKLDHVNIVHYNG-CWD 74
Query: 393 G-------------RRRA----LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG 435
G R + + EF G+LE++I + + L E QI
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT-- 132
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-- 493
+G++Y+H S ++++ D+KP NI L + KI DFGL + + G R
Sbjct: 133 --KGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLV-------TSLKNDGKRXR 180
Query: 494 --GTVGYIAPE 502
GT+ Y++PE
Sbjct: 181 SKGTLRYMSPE 191
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 23/191 (12%)
Query: 334 LGQGGYGSVYKGKL--IDGS----NVAVKVLNDSKGNGEE--FINEVASISRTSH-VNVV 384
LG+G +G V + ID + VAVK+L + + E ++E+ + H +NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 385 TLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHK----------LTWETLLQIA 433
LLG C + G +I EF G+L ++ + +K LT E L+ +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 493
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 494 GTVGYIAPEVF 504
+ ++APE
Sbjct: 214 LPLKWMAPETI 224
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 17/180 (9%)
Query: 334 LGQGGYGSVYKGKL-IDGSN---VAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G G +G V G L + G VA+K L ++ +F++E + + + H NV+ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G + +I EF+ NGSL+ F+ +N + + T L+ + GIA G++YL
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQN-----DGQFTVIQLVGMLRGIAAGMKYL---A 126
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG---TVGYIAPEVF 504
+H + NIL++ + K+SDFGL++ S + T A G + + APE
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 137
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 138 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 507 NI 508
I
Sbjct: 197 RI 198
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 23/191 (12%)
Query: 334 LGQGGYGSVYKGKL--IDGS----NVAVKVLNDSKGNGEE--FINEVASISRTSH-VNVV 384
LG+G +G V + ID + VAVK+L + + E ++E+ + H +NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 385 TLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHK----------LTWETLLQIA 433
LLG C + G +I EF G+L ++ + +K LT E L+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 493
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 494 GTVGYIAPEVF 504
+ ++APE
Sbjct: 203 LPLKWMAPETI 213
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 101/232 (43%), Gaps = 33/232 (14%)
Query: 293 SYDSTGSCLNIETFLRNHGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GS 351
S D GS + G P+ SY D K +G G +G VY+ KL D G
Sbjct: 7 SRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGE 58
Query: 352 NVAVK-VLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSLE 409
VA+K VL D + E + + + H N+V L F + G ++ +Y + +
Sbjct: 59 LVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 114
Query: 410 KFIYRNSSSIENHKLTWETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILLD 464
+ +YR + K +TL I V + R L Y+H S I H DIKP N+LLD
Sbjct: 115 ETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLD 168
Query: 465 EDFCP-KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
D K+ DFG AK R E +S +R Y APE+ G Y S
Sbjct: 169 PDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI---FGATDYTS 214
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 293 SYDSTGSCLNIETFLRNHGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GS 351
S D GS + G P+ SY D K +G G +G VY+ KL D G
Sbjct: 23 SRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGE 74
Query: 352 NVAVK-VLNDSKGNGEEFIN-EVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSL 408
VA+K VL D + F N E+ + + H N+V L F + G ++ +Y + +
Sbjct: 75 LVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 129
Query: 409 EKFIYRNSSSIENHKLTWETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILL 463
+ +YR + K +TL I V + R L Y+H S I H DIKP N+LL
Sbjct: 130 PETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLL 183
Query: 464 DEDFCP-KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
D D K+ DFG AK R E +S +R Y APE+ G Y S
Sbjct: 184 DPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI---FGATDYTS 230
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 136
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 507 NI 508
I
Sbjct: 196 RI 197
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 138
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 139 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 507 NI 508
I
Sbjct: 198 RI 199
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 127
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG + C+ S T GT+ Y+ PE+
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSS--RRTTLSGTLDYLPPEMI 179
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 101/232 (43%), Gaps = 33/232 (14%)
Query: 293 SYDSTGSCLNIETFLRNHGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GS 351
S D GS + G P+ SY D K +G G +G VY+ KL D G
Sbjct: 3 SRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGE 54
Query: 352 NVAVK-VLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSLE 409
VA+K VL D + E + + + H N+V L F + G ++ +Y + +
Sbjct: 55 LVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 110
Query: 410 KFIYRNSSSIENHKLTWETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILLD 464
+ +YR + K +TL I V + R L Y+H S I H DIKP N+LLD
Sbjct: 111 ETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLD 164
Query: 465 EDFCP-KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
D K+ DFG AK R E +S +R Y APE+ G Y S
Sbjct: 165 PDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI---FGATDYTS 210
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 101/232 (43%), Gaps = 33/232 (14%)
Query: 293 SYDSTGSCLNIETFLRNHGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GS 351
S D GS + G P+ SY D K +G G +G VY+ KL D G
Sbjct: 8 SRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGE 59
Query: 352 NVAVK-VLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSLE 409
VA+K VL D + E + + + H N+V L F + G ++ +Y + +
Sbjct: 60 LVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 115
Query: 410 KFIYRNSSSIENHKLTWETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILLD 464
+ +YR + K +TL I V + R L Y+H S I H DIKP N+LLD
Sbjct: 116 ETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLD 169
Query: 465 EDFCP-KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
D K+ DFG AK R E +S +R Y APE+ G Y S
Sbjct: 170 PDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI---FGATDYTS 215
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 93 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 144
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 145 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 203
Query: 507 NI 508
I
Sbjct: 204 RI 205
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ L+ F+ ++ + L L Q+ +GL + H S
Sbjct: 73 VIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 124
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 179
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 293 SYDSTGSCLNIETFLRNHGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GS 351
S D GS + G P+ SY D K +G G +G VY+ KL D G
Sbjct: 29 SRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGE 80
Query: 352 NVAVK-VLNDSKGNGEEFIN-EVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSL 408
VA+K VL D + F N E+ + + H N+V L F + G ++ +Y + +
Sbjct: 81 LVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 135
Query: 409 EKFIYRNSSSIENHKLTWETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILL 463
+ +YR + K +TL I V + R L Y+H S I H DIKP N+LL
Sbjct: 136 PETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLL 189
Query: 464 DEDFCP-KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
D D K+ DFG AK R E +S +R Y APE+ G Y S
Sbjct: 190 DPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI---FGATDYTS 236
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 91/179 (50%), Gaps = 15/179 (8%)
Query: 334 LGQGGYGSVYKGKLIDGS----NVAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G G +G V G+L S +VA+K L ++ +F+ E + + + H N++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G + + ++ E + NGSL+ F+ ++ + + T L+ + GIA G++YL
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIASGMKYL---S 164
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
+H D+ NIL++ + K+SDFGL+++ + E+ + G + + + +PE
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 77 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 128
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 129 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 187
Query: 507 NI 508
I
Sbjct: 188 RI 189
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 293 SYDSTGSCLNIETFLRNHGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GS 351
S D GS + G P+ SY D K +G G +G VY+ KL D G
Sbjct: 29 SRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGE 80
Query: 352 NVAVK-VLNDSKGNGEEFIN-EVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSL 408
VA+K VL D + F N E+ + + H N+V L F + G ++ +Y + +
Sbjct: 81 LVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 135
Query: 409 EKFIYRNSSSIENHKLTWETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILL 463
+ +YR + K +TL I V + R L Y+H S I H DIKP N+LL
Sbjct: 136 PETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLL 189
Query: 464 DEDFCP-KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
D D K+ DFG AK R E +S +R Y APE+ G Y S
Sbjct: 190 DPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI---FGATDYTS 236
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 134
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 507 NI 508
I
Sbjct: 194 RI 195
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 45/200 (22%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE 392
+G GG+G V+K K IDG ++ + K N E+ EV ++++ HVN+V G C++
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRV---KYNNEKAEREVKALAKLDHVNIVHYNG-CWD 75
Query: 393 G--------------------------RRRA----LIYEFVSNGSLEKFIYRNSSSIENH 422
G R + + EF G+LE++I +
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR----RGE 131
Query: 423 KLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR 482
KL L++ I +G++Y+H S +++H D+KP NI L + KI DFGL
Sbjct: 132 KLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 188
Query: 483 KESIISMTGARGTVGYIAPE 502
T ++GT+ Y++PE
Sbjct: 189 DG---KRTRSKGTLRYMSPE 205
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 23/191 (12%)
Query: 334 LGQGGYGSVYKGKL--IDGS----NVAVKVLNDSKGNGEE--FINEVASISRTSH-VNVV 384
LG+G +G V + ID + VAVK+L + + E ++E+ + H +NVV
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 385 TLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHK----------LTWETLLQIA 433
LLG C + G +I EF G+L ++ + +K LT E L+ +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 493
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 494 GTVGYIAPEVF 504
+ ++APE
Sbjct: 249 LPLKWMAPETI 259
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 21/195 (10%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHV 381
+I + + + KLG G +G V+ + VAVK + + E F+ E + H
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 237
Query: 382 NVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+V L + +I EF++ GSL F+ S E K L+ + IA G+
Sbjct: 238 KLVKLHAVVTK-EPIYIITEFMAKGSLLDFL----KSDEGSKQPLPKLIDFSAQIAEGMA 292
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAP 501
++ +H D++ NIL+ KI+DFGLA++ GA+ + + AP
Sbjct: 293 FIE---QRNYIHRDLRAANILVSASLVCKIADFGLARV-----------GAKFPIKWTAP 338
Query: 502 EVFCRNIGEVSYKSD 516
E N G + KSD
Sbjct: 339 EAI--NFGSFTIKSD 351
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 108 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 159
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 160 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 218
Query: 507 NI 508
I
Sbjct: 219 RI 220
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 293 SYDSTGSCLNIETFLRNHGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GS 351
S D GS + G P+ SY D K +G G +G VY+ KL D G
Sbjct: 31 SRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGE 82
Query: 352 NVAVK-VLNDSKGNGEEFIN-EVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSL 408
VA+K VL D + F N E+ + + H N+V L F + G ++ +Y + +
Sbjct: 83 LVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 137
Query: 409 EKFIYRNSSSIENHKLTWETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILL 463
+ +YR + K +TL I V + R L Y+H S I H DIKP N+LL
Sbjct: 138 PETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLL 191
Query: 464 DEDFCP-KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
D D K+ DFG AK R E +S +R Y APE+ G Y S
Sbjct: 192 DPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI---FGATDYTS 238
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 137
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 138 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 507 NI 508
I
Sbjct: 197 RI 198
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 23/191 (12%)
Query: 334 LGQGGYGSVYKGKL--IDGS----NVAVKVLNDSKGNGEE--FINEVASISRTSH-VNVV 384
LG+G +G V + ID + VAVK+L + + E ++E+ + H +NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 385 TLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHK----------LTWETLLQIA 433
LLG C + G +I EF G+L ++ + +K LT E L+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR 493
+A+G+E+L S + +H D+ NILL E KI DFGLA+ + + AR
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 494 GTVGYIAPEVF 504
+ ++APE
Sbjct: 203 LPLKWMAPETI 213
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 101/232 (43%), Gaps = 33/232 (14%)
Query: 293 SYDSTGSCLNIETFLRNHGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GS 351
S D GS + G P+ SY D K +G G +G VY+ KL D G
Sbjct: 7 SRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGE 58
Query: 352 NVAVK-VLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSLE 409
VA+K VL D + E+ + + H N+V L F + G ++ +Y + +
Sbjct: 59 LVAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 114
Query: 410 KFIYRNSSSIENHKLTWETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILLD 464
+ +YR + K +TL I V + R L Y+H S I H DIKP N+LLD
Sbjct: 115 ETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLD 168
Query: 465 EDFCP-KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
D K+ DFG AK R E +S +R Y APE+ G Y S
Sbjct: 169 PDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI---FGATDYTS 214
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG VYK + + G VA+K + +++G I E++ + +H N+V LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ L++EF+ + L+ F+ ++ + L L Q+ +GL + H S
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLL----QGLAFCH---S 121
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + K++DFGLA+ + + T+ Y APE+
Sbjct: 122 HRVLHRDLKPENLLINTEGAIKLADFGLARAFG--VPVRTYXHEVVTLWYRAPEILL 176
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 137
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 138 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 507 NI 508
I
Sbjct: 197 RI 198
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 137
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 138 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 507 NI 508
I
Sbjct: 197 RI 198
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 89 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 140
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 141 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 199
Query: 507 NI 508
I
Sbjct: 200 RI 201
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 21/188 (11%)
Query: 333 KLGQGGYGSVYKGKLID-GSNVAVKVL-NDSKGNGEEFINEVASISRTSHVNVVTLLGFC 390
+LG G +G VYK K + G+ A KV+ S+ E++I E+ ++ H +V LLG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
+ + ++ EF G+++ + + T QI V + LE L+ S R
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGL--------TEPQIQVVCRQMLEALNFLHSKR 129
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLA----KICNRKESIISMTGARGTVGYIAPE-VFC 505
I+H D+K N+L+ + +++DFG++ K +++S I GT ++APE V C
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMC 183
Query: 506 RNIGEVSY 513
+ + Y
Sbjct: 184 ETMKDTPY 191
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 21/188 (11%)
Query: 333 KLGQGGYGSVYKGKLID-GSNVAVKVL-NDSKGNGEEFINEVASISRTSHVNVVTLLGFC 390
+LG G +G VYK K + G+ A KV+ S+ E++I E+ ++ H +V LLG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
+ + ++ EF G+++ + + T QI V + LE L+ S R
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGL--------TEPQIQVVCRQMLEALNFLHSKR 137
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLA----KICNRKESIISMTGARGTVGYIAPE-VFC 505
I+H D+K N+L+ + +++DFG++ K +++S I GT ++APE V C
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMC 191
Query: 506 RNIGEVSY 513
+ + Y
Sbjct: 192 ETMKDTPY 199
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 136
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 507 NI 508
I
Sbjct: 196 RI 197
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 17/191 (8%)
Query: 319 SYADIKKMTNSFKYKLGQGGYGSVYKG-KLIDGSNVAVKVLN-DSKGNGEEFINEVASIS 376
S D KK F+ K+GQG G+VY + G VA++ +N + E INE+ +
Sbjct: 15 SVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMR 73
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
+ N+V L G ++ E+++ GSL + LQ
Sbjct: 74 ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ----- 128
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGL-AKICNRKESIISMTGARGT 495
LE+LH S +++H +IK NILL D K++DFG A+I + +M GT
Sbjct: 129 --ALEFLH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GT 180
Query: 496 VGYIAPEVFCR 506
++APEV R
Sbjct: 181 PYWMAPEVVTR 191
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 85/188 (45%), Gaps = 24/188 (12%)
Query: 333 KLGQGGYGSVY--KGKLIDGSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTL 386
KLG G YG V K KL G+ A+K++ S N ++EVA + + H N++ L
Sbjct: 28 KLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 387 LGFCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
F + R L+ E G L ++ I R S + + + +L G YLH
Sbjct: 87 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS-------GTTYLH- 138
Query: 446 GCSTRILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
I+H D+KP N+LL+ D KI DFGL+ E M GT YIAPE
Sbjct: 139 --KHNIVHRDLKPENLLLESKSRDALIKIVDFGLS---AHFEVGGKMKERLGTAYYIAPE 193
Query: 503 VFCRNIGE 510
V + E
Sbjct: 194 VLRKKYDE 201
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 293 SYDSTGSCLNIETFLRNHGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GS 351
S D GS + G P+ SY D K +G G +G VY+ KL D G
Sbjct: 74 SRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGE 125
Query: 352 NVAVK-VLNDSKGNGEEFIN-EVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSL 408
VA+K VL D + F N E+ + + H N+V L F + G ++ +Y + +
Sbjct: 126 LVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 180
Query: 409 EKFIYRNSSSIENHKLTWETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILL 463
+ +YR + K +TL I V + R L Y+H S I H DIKP N+LL
Sbjct: 181 PETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLL 234
Query: 464 DEDFCP-KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
D D K+ DFG AK R E +S +R Y APE+ G Y S
Sbjct: 235 DPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI---FGATDYTS 281
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 31/202 (15%)
Query: 334 LGQGGYGSVYKGKL--IDG----SNVAVKVLNDSKGNGE--EFINEVASISRTSHVNVVT 385
LG+G +G V K + G + VAVK+L ++ E + ++E + + +H +V+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 386 LLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSI-------------------ENHKLTW 426
L G C + LI E+ GSL F+ R S + + LT
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 427 ETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 486
L+ A I++G++YL +++H D+ NIL+ E KISDFGL++ ++S
Sbjct: 150 GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 487 ISMTGARGTVGYIAPEVFCRNI 508
+ + R V ++A E +I
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHI 228
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 134
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 507 NI 508
I
Sbjct: 194 RI 195
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 293 SYDSTGSCLNIETFLRNHGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GS 351
S D GS + G P+ SY D K +G G +G VY+ KL D G
Sbjct: 33 SRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGE 84
Query: 352 NVAVK-VLNDSKGNGEEFIN-EVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSL 408
VA+K VL D + F N E+ + + H N+V L F + G ++ +Y + +
Sbjct: 85 LVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV 139
Query: 409 EKFIYRNSSSIENHKLTWETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILL 463
+ +YR + K +TL I V + R L Y+H S I H DIKP N+LL
Sbjct: 140 PETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLL 193
Query: 464 DEDFCP-KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
D D K+ DFG AK R E +S +R Y APE+ G Y S
Sbjct: 194 DPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPELI---FGATDYTS 240
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 34/197 (17%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE 392
LGQG +G V K + +D A+K + ++ ++EV ++ +H VV E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 393 GR----------RRALIY---EFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
R +++ ++ E+ NG+L I+ + + + + W QI
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY-WRLFRQIL----EA 128
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII------------ 487
L Y+H S I+H D+KP NI +DE KI DFGLAK +R I+
Sbjct: 129 LSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 488 SMTGARGTVGYIAPEVF 504
++T A GT Y+A EV
Sbjct: 186 NLTSAIGTAMYVATEVL 202
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 31/202 (15%)
Query: 334 LGQGGYGSVYKGKL--IDG----SNVAVKVLNDSKGNGE--EFINEVASISRTSHVNVVT 385
LG+G +G V K + G + VAVK+L ++ E + ++E + + +H +V+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 386 LLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSI-------------------ENHKLTW 426
L G C + LI E+ GSL F+ R S + + LT
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 427 ETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 486
L+ A I++G++YL +++H D+ NIL+ E KISDFGL++ ++S
Sbjct: 150 GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 487 ISMTGARGTVGYIAPEVFCRNI 508
+ + R V ++A E +I
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHI 228
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 85/188 (45%), Gaps = 24/188 (12%)
Query: 333 KLGQGGYGSVY--KGKLIDGSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTL 386
KLG G YG V K KL G+ A+K++ S N ++EVA + + H N++ L
Sbjct: 11 KLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 387 LGFCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
F + R L+ E G L ++ I R S + + + +L G YLH
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS-------GTTYLH- 121
Query: 446 GCSTRILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
I+H D+KP N+LL+ D KI DFGL+ E M GT YIAPE
Sbjct: 122 --KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA---HFEVGGKMKERLGTAYYIAPE 176
Query: 503 VFCRNIGE 510
V + E
Sbjct: 177 VLRKKYDE 184
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 141
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 142 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 507 NI 508
I
Sbjct: 201 RI 202
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 18/183 (9%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKV-----LNDSKGNGEEFINEVASISRTSHVNVVTL 386
K+G+G + VY+ L+DG VA+K L D+K + I E+ + + +H NV+
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARAD-CIKEIDLLKQLNHPNVIKY 97
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFI--YRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
E ++ E G L + I ++ + + W+ +Q+ LE++H
Sbjct: 98 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC----SALEHMH 153
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
S R++H DIKP N+ + K+ D GL + + K + + GT Y++PE
Sbjct: 154 ---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERI 208
Query: 505 CRN 507
N
Sbjct: 209 HEN 211
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 334 LGQGGYGSVYKGKLI-----DGSNVAVKVLNDSKGNGE--EFINEVASISRTSHVNVVTL 386
LG+G +G V + G VAVK L G + E+ + H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 387 LGFCFE--GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
G C E G LI EF+ +GSL++++ +N + K+ + L+ AV I +G++YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMDYL- 130
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT-VGYIAPEV 503
S + +H D+ N+L++ + KI DFGL K + ++ R + V + APE
Sbjct: 131 --GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 188
Query: 504 FCRN 507
++
Sbjct: 189 LMQS 192
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 91/179 (50%), Gaps = 15/179 (8%)
Query: 334 LGQGGYGSVYKGKLIDGS----NVAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G G +G V G+L S +VA+K L ++ +F+ E + + + H N++ L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G + + ++ E + NGSL+ F+ ++ + + T L+ + GIA G++YL
Sbjct: 84 GVVTKSKPVMIVTEXMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIASGMKYL---S 135
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKIC-NRKESIISMTGARGTVGYIAPEVFC 505
+H D+ NIL++ + K+SDFGL+++ + E+ + G + + + +PE
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 194
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 124
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELLKR 180
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 125
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELLKR 181
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 334 LGQGGYGSVYKGKLI-----DGSNVAVKVLNDSKGNGE--EFINEVASISRTSHVNVVTL 386
LG+G +G V + G VAVK L G + E+ + H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 387 LGFCFE--GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
G C E G LI EF+ +GSL++++ +N + K+ + L+ AV I +G++YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMDYL- 142
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT-VGYIAPEV 503
S + +H D+ N+L++ + KI DFGL K + ++ R + V + APE
Sbjct: 143 --GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 200
Query: 504 FCRN 507
++
Sbjct: 201 LMQS 204
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 101/237 (42%), Gaps = 42/237 (17%)
Query: 317 RYSYADIKKMTNSFKYK-----------LGQGGYGSVYKGKLIDGS------NVAVKVLN 359
Y Y D ++ K++ LG G +G V S VAVK+L
Sbjct: 25 EYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLK 84
Query: 360 DSKGNGEE--FINEVASISRT-SHVNVVTLLGFCFEGRRRALIYEFVSNGSL-------- 408
+ + E ++E+ +++ SH N+V LLG C LI+E+ G L
Sbjct: 85 EKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKR 144
Query: 409 EKFI-----YRNSSSIENHK----LTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPH 459
EKF Y N +E + LT+E LL A +A+G+E+L +H D+
Sbjct: 145 EKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC---VHRDLAAR 201
Query: 460 NILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSD 516
N+L+ KI DFGLA+ + + AR V ++APE I + KSD
Sbjct: 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI--KSD 256
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 310 HGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GSNVAVK-VLNDSKGNGEE 367
G P+ SY D K +G G +G VY+ KL D G VA+K VL D + E
Sbjct: 12 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE 63
Query: 368 FINEVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
+ + + H N+V L F + G ++ ++Y + + + +YR + K
Sbjct: 64 ----LQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAK--- 116
Query: 427 ETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKIC 480
+TL I V + R L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 481 NRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
R E +S +R Y APE+ G Y S
Sbjct: 174 VRGEPNVSXICSR---YYRAPELI---FGATDYTS 202
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 81/178 (45%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G + K + + S E T+ T L A L Y H S
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ANALSYCH---S 131
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMI 183
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 92/211 (43%), Gaps = 35/211 (16%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVY------KGKLIDGSNVAVKVLNDSKGNGEEFINEVASI 375
DIKK+ FK LG G + V GKL + K L KG NE+A +
Sbjct: 19 DIKKIFE-FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL---KGKESSIENEIAVL 74
Query: 376 SRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG 435
+ H N+V L L+ + VS G L I E TL++
Sbjct: 75 RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDA---STLIR---Q 128
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGA 492
+ + YLH I+H D+KP N+L DE+ ISDFGL+K+ + + M+ A
Sbjct: 129 VLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTA 182
Query: 493 RGTVGYIAPEVF----------CRNIGEVSY 513
GT GY+APEV C +IG ++Y
Sbjct: 183 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY 213
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 124
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELLKR 180
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 124
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELLKR 180
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G + K + + S E T+ T L A L Y H S
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ANALSYCH---S 131
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG + +R+ + GT+ Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLX------GTLDYLPPEMI 183
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 124
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELLKR 180
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNVAVKVL------NDSKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V + V S +E ++E ++ + +V L
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 117 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 168
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 169 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 227
Query: 507 NI 508
I
Sbjct: 228 RI 229
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA G+ YL
Sbjct: 80 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAEGMNYLE-- 131
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 132 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 190
Query: 507 NI 508
I
Sbjct: 191 RI 192
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 19/179 (10%)
Query: 334 LGQGGYGSVYKGKLIDGSN----VAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G+G +G VY G+ ID + A+K L+ E F+ E + +H NV+ L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 388 GFCF--EGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
G EG L+ ++ +G L +FI + T + L+ + +ARG+EYL
Sbjct: 89 GIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNP-----TVKDLISFGLQVARGMEYL-- 140
Query: 446 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE--SIISMTGARGTVGYIAPE 502
+ +H D+ N +LDE F K++DFGLA+ +E S+ AR V + A E
Sbjct: 141 -AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 127
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG + +R++++ GT+ Y+ PE+
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC------GTLDYLPPEMI 179
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ + +H NVV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 125
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKR 181
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 124
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKR 180
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 27/201 (13%)
Query: 311 GSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNG 365
G++ R+++ D + LG+G +G+VY + K I V K + G
Sbjct: 1 GAMGSRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE 55
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLT 425
+ EV S H N++ L G+ + R LI E+ G++ + + + S E T
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 115
Query: 426 WETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRK 483
+ T L A L Y H S R++H DIKP N+LL KI+DFG + +R+
Sbjct: 116 YITEL------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 166
Query: 484 ESIISMTGARGTVGYIAPEVF 504
++ GT+ Y+ PE+
Sbjct: 167 AALC------GTLDYLPPEMI 181
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 27/201 (13%)
Query: 311 GSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNG 365
G L R+++ D + LG+G +G+VY + K I V K + G
Sbjct: 1 GPLGSRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE 55
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLT 425
+ EV S H N++ L G+ + R LI E+ G++ + + + S E T
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 115
Query: 426 WETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRK 483
+ T L A L Y H S R++H DIKP N+LL KI+DFG + +R+
Sbjct: 116 YITEL------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 166
Query: 484 ESIISMTGARGTVGYIAPEVF 504
+ + GT+ Y+ PE+
Sbjct: 167 DDLC------GTLDYLPPEMI 181
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 31/202 (15%)
Query: 334 LGQGGYGSVYKGKL--IDG----SNVAVKVLNDSKGNGE--EFINEVASISRTSHVNVVT 385
LG+G +G V K + G + VAVK+L ++ E + ++E + + +H +V+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 386 LLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSI-------------------ENHKLTW 426
L G C + LI E+ GSL F+ R S + + LT
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 427 ETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 486
L+ A I++G++YL ++H D+ NIL+ E KISDFGL++ ++S
Sbjct: 150 GDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 487 ISMTGARGTVGYIAPEVFCRNI 508
+ + R V ++A E +I
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHI 228
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 314 APRRYSYADIKKMTNSFKYKLGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEF 368
PR+++ D + LG+G +G+VY + K I V K + G +
Sbjct: 1 GPRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 55
Query: 369 INEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWET 428
EV S H N++ L G+ + R LI E+ G++ + + + S E T+ T
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 429 LLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESI 486
L A L Y H S R++H DIKP N+LL KI+DFG + +R+ ++
Sbjct: 116 EL------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 166
Query: 487 ISMTGARGTVGYIAPEVF 504
GT+ Y+ PE+
Sbjct: 167 C------GTLDYLPPEMI 178
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL------ANALSYCH---S 130
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVF 504
R++H DIKP N+LL + KI+DFG + +R++++ GT+ Y+ PE+
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC------GTLDYLPPEMI 182
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 123
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKR 179
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 330 FKYKLGQGGYGSVYKGKLID----GSNVAVKVLNDSKGN--GEEFINEVASISRTSHVNV 383
FK KLG G +G V+ L++ G +K +N + E+ E+ + H N+
Sbjct: 26 FKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI 82
Query: 384 VTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYL 443
+ + + ++ E G L + I S+ L+ + ++ + L Y
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIV--SAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 444 HLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTGARGTVGYI 499
H S ++H D+KP NIL +D P KI DFGLA++ E T A GT Y+
Sbjct: 141 H---SQHVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYM 193
Query: 500 APEVFCRNI 508
APEVF R++
Sbjct: 194 APEVFKRDV 202
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 124
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKR 180
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 25/190 (13%)
Query: 333 KLGQGGYGSVYKGKLIDGSN-VAVKV--LNDSKGNGEEFINEVASISRTSHVNVVTLLGF 389
KLG+G Y +VYKGK N VA+K L +G I EV+ + H N+VTL
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYR--NSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
+ L++E++ + L++++ N ++ N KL LL RGL Y H
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLL-------RGLAYCH--- 117
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMT--GARGTVGYIAPEVFC 505
++LH D+KP N+L++E K++DFGLA R +SI + T T+ Y P++
Sbjct: 118 RQKVLHRDLKPQNLLINERGELKLADFGLA----RAKSIPTKTYDNEVVTLWYRPPDIL- 172
Query: 506 RNIGEVSYKS 515
+G Y +
Sbjct: 173 --LGSTDYST 180
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 124
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKR 180
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 9/176 (5%)
Query: 333 KLGQGGYGSVYKG-KLIDGSNVAVK--VLNDSKGNGEEFINEVASISRTSHVNVVTLLGF 389
KLG G Y +VYKG G VA+K L+ +G I E++ + H N+V L
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV 71
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ L++EF+ N L+K++ + L + + +GL + H
Sbjct: 72 IHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---EN 127
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
+ILH D+KP N+L+++ K+ DFGLA+ + + + T+ Y AP+V
Sbjct: 128 KILHRDLKPQNLLINKRGQLKLGDFGLARAFGI--PVNTFSSEVVTLWYRAPDVLM 181
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 152
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG + +R++ + GT+ Y+ PE+
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC------GTLDYLPPEMI 204
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 329 SFKYKLGQGGYGSVYK------GKLIDGSNVAVKVLNDSK--GNGEEFINEVASISRT-S 379
F LG G +G V + GK VAVK+L + E ++E+ +S
Sbjct: 34 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 93
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSI-----------------ENH 422
H N+V LLG C G +I E+ G L F+ R + ++ +
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 423 KLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNR 482
L LL + +A+G+ +L S +H D+ N+LL KI DFGLA+
Sbjct: 154 PLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 210
Query: 483 KESIISMTGARGTVGYIAPE 502
+ I AR V ++APE
Sbjct: 211 DSNYIVKGNARLPVKWMAPE 230
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 124
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKR 180
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 124
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKR 180
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 138
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFG AK+ +E G + + ++A E
Sbjct: 139 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 507 NI 508
I
Sbjct: 198 RI 199
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 125
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKR 181
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 125
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKR 181
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 136
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFG AK+ +E G + + ++A E
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 507 NI 508
I
Sbjct: 196 RI 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 90/180 (50%), Gaps = 22/180 (12%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLGF 389
K+G+G YG VYK + G A+K + + +G I E++ + H N+V L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWET-LLQIAVGIARGLEYLHLGCS 448
+R L++E + L+K + +E+ +T ++ LLQ+ GIA Y H
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLES--VTAKSFLLQLLNGIA----YCH---D 118
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAK---ICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + KI+DFGLA+ I RK T T+ Y AP+V
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK-----YTHEVVTLWYRAPDVLM 173
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 125
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKR 181
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 124
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKR 180
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 124
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKR 180
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 90/180 (50%), Gaps = 22/180 (12%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLGF 389
K+G+G YG VYK + G A+K + + +G I E++ + H N+V L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWET-LLQIAVGIARGLEYLHLGCS 448
+R L++E + L+K + +E+ +T ++ LLQ+ GIA Y H
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLES--VTAKSFLLQLLNGIA----YCH---D 118
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAK---ICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + KI+DFGLA+ I RK T T+ Y AP+V
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK-----YTHEVVTLWYRAPDVLM 173
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 31/200 (15%)
Query: 314 APRRYSYADIKKMTNSFKYKLGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEF 368
PR+++ D + LG+G +G+VY + K I V K + G +
Sbjct: 1 GPRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 55
Query: 369 INEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWET 428
EV S H N++ L G+ + R LI E+ G++ + + + S E T+ T
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 429 LLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS 488
L A L Y H S R++H DIKP N+LL KI+DFG S+ +
Sbjct: 116 EL------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW--------SVHA 158
Query: 489 MTGAR----GTVGYIAPEVF 504
+ R GT+ Y+ PE+
Sbjct: 159 PSSRRTELCGTLDYLPPEMI 178
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 20/185 (10%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G+G YG V K + D G VA+K +D K + + E+ + + H N+V LL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 390 CFEGRRRALIYEFVSNGSLEKF-IYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
C + +R L++EFV + L+ ++ N ++++ + L QI GI + H S
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNGL---DYQVVQKYLFQIINGIG----FCH---S 142
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
I+H DIKP NIL+ + K+ DFG A+ + A T Y APE+ +
Sbjct: 143 HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA--TRWYRAPELL---V 197
Query: 509 GEVSY 513
G+V Y
Sbjct: 198 GDVKY 202
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 100/229 (43%), Gaps = 33/229 (14%)
Query: 296 STGSCLNIETFLRNHGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GSNVA 354
+ GS + G P+ SY D K +G G +G VY+ KL D G VA
Sbjct: 2 AMGSKVTTVVATPGQGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVA 53
Query: 355 VK-VLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSLEKFI 412
+K VL D + E+ + + H N+V L F + G ++ +Y + + + +
Sbjct: 54 IKKVLQDKRFKN----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV 109
Query: 413 YRNSSSIENHKLTWETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILLDEDF 467
YR + K +TL I V + R L Y+H S I H DIKP N+LLD D
Sbjct: 110 YRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDT 163
Query: 468 CP-KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
K+ DFG AK R E +S +R Y APE+ G Y S
Sbjct: 164 AVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI---FGATDYTS 206
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 333 KLGQGGYGSVYKG------KLIDGSNVAVKVLND--SKGNGEEFINEVASISRTSHVNVV 384
+LG G +GSV +G K ID VA+KVL K + EE + E + + + +V
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQID---VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 73
Query: 385 TLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
L+G C + L+ E G L KF+ I + E L Q+++G ++YL
Sbjct: 74 RLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVA-ELLHQVSMG----MKYLE 127
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA-RGTVGYIAPEV 503
+H D+ N+LL KISDFGL+K +S + A + + + APE
Sbjct: 128 ---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE- 183
Query: 504 FCRNIGEVSYKSD 516
C N + S +SD
Sbjct: 184 -CINFRKFSSRSD 195
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 136
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFG AK+ +E G + + ++A E
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 507 NI 508
I
Sbjct: 196 RI 197
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
L G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 134
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 507 NI 508
I
Sbjct: 194 RI 195
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 90/180 (50%), Gaps = 22/180 (12%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLGF 389
K+G+G YG VYK + G A+K + + +G I E++ + H N+V L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWET-LLQIAVGIARGLEYLHLGCS 448
+R L++E + L+K + +E+ +T ++ LLQ+ GIA Y H
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLES--VTAKSFLLQLLNGIA----YCH---D 118
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAK---ICNRKESIISMTGARGTVGYIAPEVFC 505
R+LH D+KP N+L++ + KI+DFGLA+ I RK T T+ Y AP+V
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK-----YTHEIVTLWYRAPDVLM 173
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 125
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKR 181
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 125
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKR 181
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G YG V + VAVK+++ + E E+ +H NVV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 125
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKR 181
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFI----NEVASISRTSHVNVVTLLG 388
LG G +G V GK + G VAVK+LN K + + E+ ++ H +++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
++ E+VS G L +I +N +L + ++ I G++Y H
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNG------RLDEKESRRLFQQILSGVDYCH---R 134
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
++H D+KP N+LLD KI+DFGL+ + + E + + G+ Y APEV
Sbjct: 135 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRXSCGSPNYAAPEVI 187
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 152
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMI 204
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 16/152 (10%)
Query: 334 LGQGGYGSVYKGKLIDGSN-VAVKVLN------DSKGNGEEFINEVASISRTSHVNVVTL 386
LG+G + +VYK + + + VA+K + G + E+ + SH N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
L +L+++F+ LE I NS + + L+ + +GLEYLH
Sbjct: 78 LDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTL-----QGLEYLH-- 129
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAK 478
ILH D+KP+N+LLDE+ K++DFGLAK
Sbjct: 130 -QHWILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
L G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 141
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 142 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 507 NI 508
I
Sbjct: 201 RI 202
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+
Sbjct: 144 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMI 195
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASISRTSHVNVVTLLG 388
LG+G + +V + L A+K+L K N ++ E +SR H V L
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 103
Query: 389 FCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
FCF+ + + NG L K+I + S E + I LEYLH
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLH--- 154
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE+
Sbjct: 155 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 131
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMI 183
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 134
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFG AK+ +E G + + ++A E
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 507 NI 508
I
Sbjct: 194 RI 195
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL------ANALSYCH---S 130
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVF 504
R++H DIKP N+LL + KI+DFG + +R+ ++ GT+ Y+ PE+
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMI 182
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 136
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFG AK+ +E G + + ++A E
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 507 NI 508
I
Sbjct: 196 RI 197
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 96/215 (44%), Gaps = 33/215 (15%)
Query: 310 HGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GSNVAVK-VLNDSKGNGEE 367
G P+ SY D K +G G +G VY+ KL D G VA+K VL D +
Sbjct: 12 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 61
Query: 368 FINEVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
E+ + + H N+V L F + G ++ +Y + + + +YR + K
Sbjct: 62 --RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--- 116
Query: 427 ETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKIC 480
+TL I V + R L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 481 NRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
R E +S +R Y APE+ G Y S
Sbjct: 174 VRGEPNVSXICSR---YYRAPELI---FGATDYTS 202
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 96/215 (44%), Gaps = 33/215 (15%)
Query: 310 HGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GSNVAVK-VLNDSKGNGEE 367
G P+ SY D K +G G +G VY+ KL D G VA+K VL D +
Sbjct: 13 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 62
Query: 368 FINEVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
E+ + + H N+V L F + G ++ +Y + + + +YR + K
Sbjct: 63 --RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--- 117
Query: 427 ETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKIC 480
+TL I V + R L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 118 QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
Query: 481 NRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
R E +S +R Y APE+ G Y S
Sbjct: 175 VRGEPNVSXICSR---YYRAPELI---FGATDYTS 203
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 129
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMI 181
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 126
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC------GTLDYLPPEMI 178
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 96/215 (44%), Gaps = 33/215 (15%)
Query: 310 HGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GSNVAVK-VLNDSKGNGEE 367
G P+ SY D K +G G +G VY+ KL D G VA+K VL D +
Sbjct: 12 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 61
Query: 368 FINEVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
E+ + + H N+V L F + G ++ +Y + + + +YR + K
Sbjct: 62 --RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--- 116
Query: 427 ETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKIC 480
+TL I V + R L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 481 NRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
R E +S +R Y APE+ G Y S
Sbjct: 174 VRGEPNVSXICSR---YYRAPELI---FGATDYTS 202
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 26/180 (14%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 127
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMI 179
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 96/215 (44%), Gaps = 33/215 (15%)
Query: 310 HGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GSNVAVK-VLNDSKGNGEE 367
G P+ SY D K +G G +G VY+ KL D G VA+K VL D +
Sbjct: 12 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 61
Query: 368 FINEVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
E+ + + H N+V L F + G ++ +Y + + + +YR + K
Sbjct: 62 --RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--- 116
Query: 427 ETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKIC 480
+TL I V + R L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 481 NRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
R E +S +R Y APE+ G Y S
Sbjct: 174 VRGEPNVSYICSR---YYRAPELI---FGATDYTS 202
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 26/180 (14%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 128
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRXXLCGTLDYLPPEMI 180
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
L G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 141
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFGLAK+ +E G + + ++A E
Sbjct: 142 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 507 NI 508
I
Sbjct: 201 RI 202
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 334 LGQGGYGSVYKGKLI-DGSNV----AVKVLND--SKGNGEEFINEVASISRTSHVNVVTL 386
LG G +G+VYKG I +G V A+K L + S +E ++E ++ + +V L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
LG C + LI + + G L ++ + +I + + LL V IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS-----QYLLNWCVQIAKGMNYLE-- 141
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
R++H D+ N+L+ KI+DFG AK+ +E G + + ++A E
Sbjct: 142 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 507 NI 508
I
Sbjct: 201 RI 202
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 125
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMI 177
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 26/180 (14%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 126
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMI 178
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 26/180 (14%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 131
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMI 183
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 26/180 (14%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 126
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTDLCGTLDYLPPEMI 178
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 23/194 (11%)
Query: 321 ADIKKMTNSFKYKLGQGGYGSV-YKGKLIDGSNVAVKVLNDSKGNGEEFI-NEVASISRT 378
D + + +S+ K+G+G G V + G VAVK+++ K E + NEV +
Sbjct: 41 GDPRLLLDSY-VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY 99
Query: 379 SHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIAR 438
H NVV + G ++ EF+ G+L + + +L E + + + +
Sbjct: 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGAL-------TDIVSQVRLNEEQIATVCEAVLQ 152
Query: 439 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFG----LAKICNRKESIISMTGARG 494
L YLH + ++H DIK +ILL D K+SDFG ++K +++ ++ G
Sbjct: 153 ALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV------G 203
Query: 495 TVGYIAPEVFCRNI 508
T ++APEV R++
Sbjct: 204 TPYWMAPEVISRSL 217
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 129
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMI 181
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 313 LAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGS----NVAVKVLND--SKGNGE 366
L PR I + LG+G +G VY+G + NVAVK + N E
Sbjct: 11 LVPRGSPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE 70
Query: 367 EFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
+F++E + H ++V L+G E +I E G L ++ RN +S++
Sbjct: 71 KFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL---- 125
Query: 427 ETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 486
TL+ ++ I + + YL S +H DI NIL+ C K+ DFGL++ E
Sbjct: 126 -TLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDY 180
Query: 487 ISMTGARGTVGYIAPE 502
+ R + +++PE
Sbjct: 181 YKASVTRLPIKWMSPE 196
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 130
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+
Sbjct: 131 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMI 182
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 84/197 (42%), Gaps = 32/197 (16%)
Query: 333 KLGQGGYGSVYKGKLIDG-SNVAVKVLNDSKGNG--------------EEFINEVASISR 377
KLG G YG V K +G S A+KV+ S+ + EE NE++ +
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 378 TSHVNVVTLLGFCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIAVGI 436
H N++ L + + L+ EF G L E+ I R HK I I
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR-------HKFDECDAANIMKQI 155
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDED---FCPKISDFGLAKICNRKESIISMTGAR 493
G+ YLH I+H DIKP NILL+ KI DFGL+ ++ +
Sbjct: 156 LSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD---YKLRDRL 209
Query: 494 GTVGYIAPEVFCRNIGE 510
GT YIAPEV + E
Sbjct: 210 GTAYYIAPEVLKKKYNE 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 90/185 (48%), Gaps = 26/185 (14%)
Query: 334 LGQGGYGSVYKGKLIDGSNV----AVKVLNDSKGNGEEFIN---EVASISRTSHVNVVTL 386
LGQG +G V+ K I GS+ A+KVL + + + E + +H +V L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 387 -LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
F EG+ LI +F+ G L R S + T E + +A L++LH
Sbjct: 92 HYAFQTEGKL-YLILDFLRGGDL---FTRLSKEV---MFTEEDVKFYLAELALALDHLH- 143
Query: 446 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR---GTVGYIAPE 502
S I++ D+KP NILLDE+ K++DFGL+ KESI A GTV Y+APE
Sbjct: 144 --SLGIIYRDLKPENILLDEEGHIKLTDFGLS-----KESIDHEKKAYSFCGTVEYMAPE 196
Query: 503 VFCRN 507
V R
Sbjct: 197 VVNRR 201
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 98/216 (45%), Gaps = 35/216 (16%)
Query: 310 HGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GSNVAVK-VLNDSKGNGEE 367
G P+ SY D K +G G +G VY+ KL D G VA+K VL D +
Sbjct: 17 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----- 63
Query: 368 FIN-EVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLT 425
F N E+ + + H N+V L F + G ++ +Y + + + +YR + K
Sbjct: 64 FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK-- 121
Query: 426 WETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKI 479
+TL I V + R L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 122 -QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 177
Query: 480 CNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
R E +S +R Y APE+ G Y S
Sbjct: 178 LVRGEPNVSYICSR---YYRAPELI---FGATDYTS 207
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 34/197 (17%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE 392
LGQG +G V K + +D A+K + ++ ++EV ++ +H VV E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 393 GR----------RRALIY---EFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
R +++ ++ E+ N +L I+ + + + + W QI
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY-WRLFRQIL----EA 128
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII------------ 487
L Y+H S I+H D+KP NI +DE KI DFGLAK +R I+
Sbjct: 129 LSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 488 SMTGARGTVGYIAPEVF 504
++T A GT Y+A EV
Sbjct: 186 NLTSAIGTAMYVATEVL 202
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 84/192 (43%), Gaps = 18/192 (9%)
Query: 324 KKMTNSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASIS 376
KK FK+ LG+G + +V + L A+K+L K N ++ E +S
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 377 RTSHVNVVTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG 435
R H V L F F+ + + NG L K+I + S E +
Sbjct: 65 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAE 117
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 495
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + + GT
Sbjct: 118 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 496 VGYIAPEVFCRN 507
Y++PE+
Sbjct: 175 AQYVSPELLTEK 186
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 131
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPE 502
R++H DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPE 181
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 84/192 (43%), Gaps = 18/192 (9%)
Query: 324 KKMTNSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASIS 376
KK FK+ LG+G + +V + L A+K+L K N ++ E +S
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 377 RTSHVNVVTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG 435
R H V L F F+ + + NG L K+I + S E +
Sbjct: 66 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAE 118
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 495
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + + GT
Sbjct: 119 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 496 VGYIAPEVFCRN 507
Y++PE+
Sbjct: 176 AQYVSPELLTEK 187
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 26/180 (14%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 126
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRXXLCGTLDYLPPEMI 178
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 84/192 (43%), Gaps = 18/192 (9%)
Query: 324 KKMTNSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASIS 376
KK FK+ LG+G + +V + L A+K+L K N ++ E +S
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 377 RTSHVNVVTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG 435
R H V L F F+ + + NG L K+I + S E +
Sbjct: 64 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAE 116
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 495
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + + GT
Sbjct: 117 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 496 VGYIAPEVFCRN 507
Y++PE+
Sbjct: 174 AQYVSPELLTEK 185
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 26/180 (14%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 126
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRTXLCGTLDYLPPEMI 178
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 26/180 (14%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 129
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG S+ + + R GT+ Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRXXLCGTLDYLPPEMI 181
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 84/192 (43%), Gaps = 18/192 (9%)
Query: 324 KKMTNSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASIS 376
KK FK+ LG+G + +V + L A+K+L K N ++ E +S
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 377 RTSHVNVVTLLGFCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG 435
R H V L F F+ + + NG L K+I + S E +
Sbjct: 63 RLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAE 115
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 495
I LEYLH I+H D+KP NILL+ED +I+DFG AK+ + + GT
Sbjct: 116 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 496 VGYIAPEVFCRN 507
Y++PE+
Sbjct: 173 AQYVSPELLTEK 184
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 336 QGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFEGRR 395
Q G G Y K I ++ S+ EE EV + H N++TL
Sbjct: 33 QKGTGKEYAAKFIKKRRLSSSRRGVSR---EEIEREVNILREIRHPNIITLHDIFENKTD 89
Query: 396 RALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFD 455
LI E VS G L F+ E LT + Q I G+ YLH S RI HFD
Sbjct: 90 VVLILELVSGGELFDFLA------EKESLTEDEATQFLKQILDGVHYLH---SKRIAHFD 140
Query: 456 IKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTGARGTVGYIAPEV 503
+KP NI+L + P K+ DFG+A ++ E+ GT ++APE+
Sbjct: 141 LKPENIMLLDKNVPNPRIKLIDFGIA---HKIEAGNEFKNIFGTPEFVAPEI 189
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 17/185 (9%)
Query: 333 KLGQGGYGSV---YKGKLID--GSNVAVKVLNDSKGNGEEFINEVASISRTSHVN-VVTL 386
+LG+G +GSV L D G+ VAVK L S + + I + H + +V
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 387 LGFCFEGRRRAL--IYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
G + R++L + E++ +G L F+ R+ + ++ +L L + I +G+EYL
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL-----LLYSSQICKGMEYL- 130
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICN-RKESIISMTGARGTVGYIAPEV 503
S R +H D+ NIL++ + KI+DFGLAK+ K+ + + + + APE
Sbjct: 131 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 504 FCRNI 508
NI
Sbjct: 189 LSDNI 193
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 17/185 (9%)
Query: 333 KLGQGGYGSV---YKGKLID--GSNVAVKVLNDSKGNGEEFINEVASISRTSHVN-VVTL 386
+LG+G +GSV L D G+ VAVK L S + + I + H + +V
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 387 LGFCFEGRRRAL--IYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
G + R++L + E++ +G L F+ R+ + ++ +L L + I +G+EYL
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL-----LLYSSQICKGMEYLG 132
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICN-RKESIISMTGARGTVGYIAPEV 503
S R +H D+ NIL++ + KI+DFGLAK+ K+ + + + + APE
Sbjct: 133 ---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 189
Query: 504 FCRNI 508
NI
Sbjct: 190 LSDNI 194
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 17/185 (9%)
Query: 333 KLGQGGYGSV---YKGKLID--GSNVAVKVLNDSKGNGEEFINEVASISRTSHVN-VVTL 386
+LG+G +GSV L D G+ VAVK L S + + I + H + +V
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 387 LGFCFEGRRRAL--IYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
G + R++L + E++ +G L F+ R+ + ++ +L L + I +G+EYL
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL-----LLYSSQICKGMEYLG 144
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICN-RKESIISMTGARGTVGYIAPEV 503
S R +H D+ NIL++ + KI+DFGLAK+ K+ + + + + APE
Sbjct: 145 ---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 504 FCRNI 508
NI
Sbjct: 202 LSDNI 206
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 333 KLGQGGYGSVYKG------KLIDGSNVAVKVLND--SKGNGEEFINEVASISRTSHVNVV 384
+LG G +GSV +G K ID VA+KVL K + EE + E + + + +V
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQID---VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399
Query: 385 TLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
L+G C + L+ E G L KF+ I + E L Q+++G ++YL
Sbjct: 400 RLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVA-ELLHQVSMG----MKYLE 453
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA-RGTVGYIAPEV 503
+H ++ N+LL KISDFGL+K +S + A + + + APE
Sbjct: 454 ---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE- 509
Query: 504 FCRNIGEVSYKSD 516
C N + S +SD
Sbjct: 510 -CINFRKFSSRSD 521
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 83/177 (46%), Gaps = 17/177 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAV-KVLNDSKGNGEEFINEVASISR-TSHVNVVTLLGFCF 391
+G G +G V++ KL++ VA+ KVL D + F N I R H NVV L F +
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 392 E-GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLL--QIAVGIARGLEYLHLGCS 448
G ++ ++ + + + +YR S K T LL + R L Y+H S
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---S 159
Query: 449 TRILHFDIKPHNILLDEDF-CPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I H DIKP N+LLD K+ DFG AKI E +S +R Y APE+
Sbjct: 160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR---YYRAPELI 213
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 123
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVF 504
R++H DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMI 175
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 336 QGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFEGRR 395
Q G G Y K I ++ S+ EE EV + H N++TL
Sbjct: 26 QKGTGKEYAAKFIKKRRLSSSRRGVSR---EEIEREVNILREIRHPNIITLHDIFENKTD 82
Query: 396 RALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFD 455
LI E VS G L F+ E LT + Q I G+ YLH S RI HFD
Sbjct: 83 VVLILELVSGGELFDFLA------EKESLTEDEATQFLKQILDGVHYLH---SKRIAHFD 133
Query: 456 IKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTGARGTVGYIAPEV 503
+KP NI+L + P K+ DFG+A ++ E+ GT ++APE+
Sbjct: 134 LKPENIMLLDKNVPNPRIKLIDFGIA---HKIEAGNEFKNIFGTPEFVAPEI 182
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 310 HGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GSNVAVKVLNDSKGNGEEF 368
G P+ SY D K +G G +G VY+ KL D G VA+K + G+ F
Sbjct: 12 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAF 59
Query: 369 IN-EVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
N E+ + + H N+V L F + G ++ +Y + + + +YR + K
Sbjct: 60 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--- 116
Query: 427 ETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKIC 480
+TL I V + R L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 481 NRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
R E +S +R Y APE+ G Y S
Sbjct: 174 VRGEPNVSYICSR---YYRAPELI---FGATDYTS 202
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 334 LGQGGYGSVYKGKLIDGS----NVAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
LG+G +G VY+G + NVAVK + N E+F++E + H ++V L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G E +I E G L ++ RN +S++ TL+ ++ I + + YL
Sbjct: 76 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL-----TLVLYSLQICKAMAYLE--- 126
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
S +H DI NIL+ C K+ DFGL++ E + R + +++PE
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPE 180
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 310 HGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GSNVAVKVLNDSKGNGEEF 368
G P+ SY D K +G G +G VY+ KL D G VA+K + G+ F
Sbjct: 12 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAF 59
Query: 369 IN-EVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
N E+ + + H N+V L F + G ++ +Y + + + +YR + K
Sbjct: 60 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK--- 116
Query: 427 ETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKIC 480
+TL I V + R L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 481 NRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
R E +S +R Y APE+ G Y S
Sbjct: 174 VRGEPNVSYICSR---YYRAPELI---FGATDYTS 202
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 323 IKKMTNSFKYKLGQGGYGSVYKGK------LIDGSNVAVKVLND-SKGNGEEFINEVASI 375
IK+ K +LG+G +G V+ + D VAVK L D + ++F E +
Sbjct: 12 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELL 71
Query: 376 SRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSI----------ENHKLT 425
+ H ++V G C +G +++E++ +G L KF+ + +L
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 426 WETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK 478
+L IA IA G+ YL S +H D+ N L+ + KI DFG+++
Sbjct: 132 LSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 30/196 (15%)
Query: 334 LGQGGYGSVYKGKL-IDGSNVAVKVLNDSKG-NGEEFINEVASISRTSHVNVVTLLGFCF 391
LG G + V+ K + G A+K + S NE+A + + H N+VTL
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 392 EGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
L+ + VS G L ++ + R + ++ L + +L ++YLH
Sbjct: 77 STTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLS-------AVKYLH---ENG 126
Query: 451 ILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF--- 504
I+H D+KP N+L +E+ I+DFGL+K+ E M+ A GT GY+APEV
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQK 182
Query: 505 -------CRNIGEVSY 513
C +IG ++Y
Sbjct: 183 PYSKAVDCWSIGVITY 198
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 10/148 (6%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAV--KVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCF 391
LG+G +G K + V V +++ + F+ EV + H NV+ +G +
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 392 EGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRI 451
+ +R I E++ G+L I S + W + A IA G+ YLH S I
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDS-----QYPWSQRVSFAKDIASGMAYLH---SMNI 129
Query: 452 LHFDIKPHNILLDEDFCPKISDFGLAKI 479
+H D+ HN L+ E+ ++DFGLA++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARL 157
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 90/185 (48%), Gaps = 26/185 (14%)
Query: 334 LGQGGYGSVYKGKLIDGSNV----AVKVLNDSKGNGEEFIN---EVASISRTSHVNVVTL 386
LGQG +G V+ K I GS+ A+KVL + + + E + +H +V L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 387 -LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
F EG+ LI +F+ G L R S + T E + +A L++LH
Sbjct: 92 HYAFQTEGKL-YLILDFLRGGDL---FTRLSKEV---MFTEEDVKFYLAELALALDHLH- 143
Query: 446 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR---GTVGYIAPE 502
S I++ D+KP NILLDE+ K++DFGL+ KESI A GTV Y+APE
Sbjct: 144 --SLGIIYRDLKPENILLDEEGHIKLTDFGLS-----KESIDHEKKAYSFCGTVEYMAPE 196
Query: 503 VFCRN 507
V R
Sbjct: 197 VVNRR 201
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 330 FKYKLGQGGYGSV-YKGKLIDGSNVAVK-VLNDSKGNGEEFINEVASISRTSHVNVVTLL 387
F KLG+GG+ V L DG A+K +L + + EE E +H N++ L+
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 388 GFCFEGR----RRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYL 443
+C R L+ F G+L I R + + LT + +L + +GI RGLE +
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKD--KGNFLTEDQILWLLLGICRGLEAI 150
Query: 444 HLGCSTRILHFDIKPHNILLDEDFCPKISDFG-LAKICNRKE------SIISMTGARGTV 496
H + H D+KP NILL ++ P + D G + + C E ++ R T+
Sbjct: 151 H---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 497 GYIAPEVF 504
Y APE+F
Sbjct: 208 SYRAPELF 215
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 90/185 (48%), Gaps = 26/185 (14%)
Query: 334 LGQGGYGSVYKGKLIDGSNV----AVKVLNDSKGNGEEFIN---EVASISRTSHVNVVTL 386
LGQG +G V+ K I GS+ A+KVL + + + E + +H +V L
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 387 -LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
F EG+ LI +F+ G L R S + T E + +A L++LH
Sbjct: 93 HYAFQTEGKL-YLILDFLRGGDL---FTRLSKEV---MFTEEDVKFYLAELALALDHLH- 144
Query: 446 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR---GTVGYIAPE 502
S I++ D+KP NILLDE+ K++DFGL+ KESI A GTV Y+APE
Sbjct: 145 --SLGIIYRDLKPENILLDEEGHIKLTDFGLS-----KESIDHEKKAYSFCGTVEYMAPE 197
Query: 503 VFCRN 507
V R
Sbjct: 198 VVNRR 202
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 96/215 (44%), Gaps = 33/215 (15%)
Query: 310 HGSLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GSNVAVKVLNDSKGNGEEF 368
G P+ SY D K +G G +G VY+ KL D G VA+K + G+ F
Sbjct: 12 QGPDRPQEVSYTDTKV--------IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAF 59
Query: 369 IN-EVASISRTSHVNVVTLLGFCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
N E+ + + H N+V L F + G ++ +Y + + +YR + K
Sbjct: 60 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAK--- 116
Query: 427 ETLLQIAVGIA-----RGLEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAKIC 480
+TL I V + R L Y+H S I H DIKP N+LLD D K+ DFG AK
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 481 NRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKS 515
R E +S +R Y APE+ G Y S
Sbjct: 174 VRGEPNVSXICSR---YYRAPELI---FGATDYTS 202
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 334 LGQGGYGSVYKGKLI----DGSNVAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
LG+G +G VY+G + NVAVK + N E+F++E + H ++V L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G E +I E G L ++ RN +S++ TL+ ++ I + + YL
Sbjct: 80 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL-----TLVLYSLQICKAMAYLE--- 130
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
S +H DI NIL+ C K+ DFGL++ E + R + +++PE
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPE 184
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 84/197 (42%), Gaps = 29/197 (14%)
Query: 335 GQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFEGR 394
+G +G V+K +L++ VAVK+ + E+ S H N LL F +
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQSEREIFSTPGMKHEN---LLQFIAAEK 79
Query: 395 RRA-------LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL-- 445
R + LI F GSL ++ N +TW L +A ++RGL YLH
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYLKGNI-------ITWNELCHVAETMSRGLSYLHEDV 132
Query: 446 ------GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYI 499
G I H D K N+LL D ++DFGLA + G GT Y+
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 500 APEVFCRNIGEVSYKSD 516
APEV G ++++ D
Sbjct: 193 APEVLE---GAINFQRD 206
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 74/172 (43%), Gaps = 19/172 (11%)
Query: 336 QGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFEGRR 395
Q G G Y K I + S+ EE EV + H N++TL
Sbjct: 47 QKGTGKEYAAKFIKKRRLXSSRRGVSR---EEIEREVNILREIRHPNIITLHDIFENKTD 103
Query: 396 RALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFD 455
LI E VS G L F+ E LT + Q I G+ YLH S RI HFD
Sbjct: 104 VVLILELVSGGELFDFL------AEKESLTEDEATQFLKQILDGVHYLH---SKRIAHFD 154
Query: 456 IKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTGARGTVGYIAPEV 503
+KP NI+L + P K+ DFG+A ++ E+ GT ++APE+
Sbjct: 155 LKPENIMLLDKNVPNPRIKLIDFGIA---HKIEAGNEFKNIFGTPEFVAPEI 203
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 312 SLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKG-KLIDGSNVAVKVL---NDSKGNGEE 367
S AP S +++T KLG+G YG VYK + VA+K + ++ +G
Sbjct: 25 SAAPSATSIDRYRRIT-----KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGT 79
Query: 368 FINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWE 427
I EV+ + H N++ L R LI+E+ N L+K++ +N ++
Sbjct: 80 AIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPD------VSMR 132
Query: 428 TLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILL---DEDFCP--KISDFGLAKICNR 482
+ + G+ + H S R LH D+KP N+LL D P KI DFGLA+
Sbjct: 133 VIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI 189
Query: 483 KESIISMTGARGTVGYIAPEVFC 505
I T T+ Y PE+
Sbjct: 190 --PIRQFTHEIITLWYRPPEILL 210
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 26/186 (13%)
Query: 334 LGQGGYGSVYKGKLIDGSNV----AVKVLNDSK--GNGEEFINEVAS---ISRTSHVNVV 384
LG+GGYG V++ + + G+N A+KVL + N ++ + A + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 385 TLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
L+ G + LI E++S G L + R +E+ + + +A+G +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------HLH 138
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR---GTVGYIAP 501
I++ D+KP NI+L+ K++DFGL KESI T GT+ Y+AP
Sbjct: 139 ---QKGIIYRDLKPENIMLNHQGHVKLTDFGLC-----KESIHDGTVTHXFCGTIEYMAP 190
Query: 502 EVFCRN 507
E+ R+
Sbjct: 191 EILMRS 196
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 26/186 (13%)
Query: 334 LGQGGYGSVYKGKLIDGSNV----AVKVLNDSK--GNGEEFINEVAS---ISRTSHVNVV 384
LG+GGYG V++ + + G+N A+KVL + N ++ + A + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 385 TLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
L+ G + LI E++S G L + R +E+ + + +A+G +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------HLH 138
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR---GTVGYIAP 501
I++ D+KP NI+L+ K++DFGL KESI T GT+ Y+AP
Sbjct: 139 ---QKGIIYRDLKPENIMLNHQGHVKLTDFGLC-----KESIHDGTVTHTFCGTIEYMAP 190
Query: 502 EVFCRN 507
E+ R+
Sbjct: 191 EILMRS 196
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 128
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVF 504
R++H DIKP N+LL KI++FG + +R+ ++ GT+ Y+ PE+
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC------GTLDYLPPEMI 180
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Query: 333 KLGQGGYGSV-YKGKLIDGSNVAVKVLNDSKGNGEEFI-NEVASISRTSHVNVVTLLGFC 390
K+G+G G V + G VAVK ++ K E + NEV + H NVV +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
G ++ EF+ G+L + + + ++ E + + + + R L YLH +
Sbjct: 112 LVGDELWVVMEFLEGGAL-------TDIVTHTRMNEEQIATVCLSVLRALSYLH---NQG 161
Query: 451 ILHFDIKPHNILLDEDFCPKISDFG----LAKICNRKESIISMTGARGTVGYIAPEVFCR 506
++H DIK +ILL D K+SDFG ++K +++ ++ GT ++APEV R
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV------GTPYWMAPEVISR 215
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + G + EV S H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 129
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVF 504
R++H DIKP N+LL KI++FG + +R+ ++ GT+ Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC------GTLDYLPPEMI 181
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 22/178 (12%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGE--EFINEVASISRTSHVNVVTLL-GF 389
+LG G +G VYK + + S +A + D+K E +++ E+ ++ H N+V LL F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+E LI EF + G+++ + + T QI V + L+ L+
Sbjct: 104 YYENNLWILI-EFCAGGAVDAVMLELERPL--------TESQIQVVCKQTLDALNYLHDN 154
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLA----KICNRKESIISMTGARGTVGYIAPEV 503
+I+H D+K NIL D K++DFG++ + R++S I GT ++APEV
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI------GTPYWMAPEV 206
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 22/178 (12%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGE--EFINEVASISRTSHVNVVTLL-GF 389
+LG G +G VYK + + S +A + D+K E +++ E+ ++ H N+V LL F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+E LI EF + G+++ + + T QI V + L+ L+
Sbjct: 104 YYENNLWILI-EFCAGGAVDAVMLELERPL--------TESQIQVVCKQTLDALNYLHDN 154
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLA----KICNRKESIISMTGARGTVGYIAPEV 503
+I+H D+K NIL D K++DFG++ + R++S I GT ++APEV
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI------GTPYWMAPEV 206
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASISRTSHVNVVTLLG 388
LG+G + +V + L A+K+L K N ++ E +SR H V L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 389 FCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ + + NG L K+I + S E + I LEYLH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLH--- 147
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE+
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 17/185 (9%)
Query: 333 KLGQGGYGSV---YKGKLID--GSNVAVKVLNDSKGNGEEFINEVASISRTSHVN-VVTL 386
+LG+G +GSV L D G+ VAVK L S + + I + H + +V
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 387 LGFCFEGRRRAL--IYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
G + R L + E++ +G L F+ R+ + ++ +L L + I +G+EYL
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRL-----LLYSSQICKGMEYLG 128
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICN-RKESIISMTGARGTVGYIAPEV 503
S R +H D+ NIL++ + KI+DFGLAK+ K+ + + + + APE
Sbjct: 129 ---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 504 FCRNI 508
NI
Sbjct: 186 LSDNI 190
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASISRTSHVNVVTLLG 388
LG+G + +V + L A+K+L K N ++ E +SR H V L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 95
Query: 389 FCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ + + NG L K+I + S E + I LEYLH
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLH--- 146
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE+
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFC 390
LG+G G V + VAVK+++ + E E+ +H NVV G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
EG + L E+ S G L I + E + Q+ G+ YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVV----YLH---GIG 124
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI--CNRKESIISMTGARGTVGYIAPEVFCR 506
I H DIKP N+LLDE KISDFGLA + N +E +++ GT+ Y+APE+ R
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKR 180
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 321 ADIKKMTNSFKYK-LGQGGYGSVYKGKLI-DGSNVAV----KVLNDSKGNG--EEFINEV 372
A I K T K K LG G +G+V+KG I +G ++ + KV+ D G + + +
Sbjct: 25 ARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHM 84
Query: 373 ASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQI 432
+I H ++V LLG C G L+ +++ GSL + ++ + L + LL
Sbjct: 85 LAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGA-----LGPQLLLNW 138
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
V IA+G+ YL ++H ++ N+LL +++DFG+A + + + + A
Sbjct: 139 GVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEA 195
Query: 493 RGTVGYIAPEVFCRNIGEVSYKSD 516
+ + ++A E + G+ +++SD
Sbjct: 196 KTPIKWMALESI--HFGKYTHQSD 217
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 362 KGNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRAL--IYEFVSNGSLEKFIYRNSSSI 419
+G E+ E+A + + H NVV L+ + L ++E V+ G + + S
Sbjct: 77 RGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSE 136
Query: 420 ENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKI 479
+ + ++ L+ +G+EYLH +I+H DIKP N+L+ ED KI+DFG++
Sbjct: 137 DQARFYFQDLI-------KGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 480 CNRKESIISMTGARGTVGYIAPE 502
++++S T GT ++APE
Sbjct: 187 FKGSDALLSNT--VGTPAFMAPE 207
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 321 ADIKKMTNSFKYK-LGQGGYGSVYKGKLI-DGSNVAV----KVLNDSKGNG--EEFINEV 372
A I K T K K LG G +G+V+KG I +G ++ + KV+ D G + + +
Sbjct: 7 ARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHM 66
Query: 373 ASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQI 432
+I H ++V LLG C G L+ +++ GSL + ++ + L + LL
Sbjct: 67 LAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGA-----LGPQLLLNW 120
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA 492
V IA+G+ YL ++H ++ N+LL +++DFG+A + + + + A
Sbjct: 121 GVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEA 177
Query: 493 RGTVGYIAPEVFCRNIGEVSYKSD 516
+ + ++A E + G+ +++SD
Sbjct: 178 KTPIKWMALESI--HFGKYTHQSD 199
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASISRTSHVNVVTLLG 388
LG+G + +V + L A+K+L K N ++ E +SR H V L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 99
Query: 389 FCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ + + NG L K+I + S E + I LEYLH
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLH--- 150
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE+
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 24/195 (12%)
Query: 329 SFKYKLGQGGYGSVYKG------KLIDGSNVAVKVLNDSK--GNGEEFINEVASISRT-S 379
SF LG G +G V + K VAVK+L S E ++E+ +S +
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLL--------- 430
H+N+V LLG C G +I E+ G L F+ R S K + +
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 431 ---QIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 487
+ +A+G+ +L S +H D+ NILL KI DFGLA+ + +
Sbjct: 162 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 488 SMTGARGTVGYIAPE 502
AR V ++APE
Sbjct: 219 VKGNARLPVKWMAPE 233
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 34/197 (17%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE 392
LGQG +G V K + +D A+K + ++ ++EV ++ +H VV E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE 73
Query: 393 GR----------RRALIY---EFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
R +++ ++ E+ N +L I+ + + + + W QI
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY-WRLFRQIL----EA 128
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII------------ 487
L Y+H S I+H ++KP NI +DE KI DFGLAK +R I+
Sbjct: 129 LSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 488 SMTGARGTVGYIAPEVF 504
++T A GT Y+A EV
Sbjct: 186 NLTSAIGTAXYVATEVL 202
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASISRTSHVNVVTLLG 388
LG+G + +V + L A+K+L K N ++ E +SR H V L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 95
Query: 389 FCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ + + NG L K+I + S E + I LEYLH
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLH--- 146
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE+
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 24/195 (12%)
Query: 329 SFKYKLGQGGYGSVYKG------KLIDGSNVAVKVLNDSK--GNGEEFINEVASISRT-S 379
SF LG G +G V + K VAVK+L S E ++E+ +S +
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLL--------- 430
H+N+V LLG C G +I E+ G L F+ R S K + +
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 431 ---QIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 487
+ +A+G+ +L S +H D+ NILL KI DFGLA+ + +
Sbjct: 146 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 488 SMTGARGTVGYIAPE 502
AR V ++APE
Sbjct: 203 VKGNARLPVKWMAPE 217
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASISRTSHVNVVTLLG 388
LG+G + +V + L A+K+L K N ++ E +SR H V L
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 80
Query: 389 FCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ + + NG L K+I + S E + I LEYLH
Sbjct: 81 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLH--- 131
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE+
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY K I V K + G + EV S H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + R LI E+ G++ + + + S E T+ T L A L Y H S
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCH---S 126
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA--KICNRKESIISMTGARGTVGYIAPEVF 504
+++H DIKP N+LL KI+DFG + +R+ ++ GT+ Y+ PE+
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC------GTLDYLPPEMI 178
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSN----VAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G+G +G V++G + N VA+K + S E+F+ E ++ + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G E +I E + G L F+ + + L +L+ A ++ L YL
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLE--- 128
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
S R +H DI N+L+ + C K+ DFGL++ + + + + ++APE
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPE 182
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSN----VAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G+G +G V++G + N VA+K + S E+F+ E ++ + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G E +I E + G L F+ + + L +L+ A ++ L YL
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLE--- 128
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
S R +H DI N+L+ + C K+ DFGL++ + + + + ++APE
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPE 182
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASISRTSHVNVVTLLG 388
LG+G + +V + L A+K+L K N ++ E +SR H V L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 389 FCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ + + NG L K+I + S E + I LEYLH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLH--- 147
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE+
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASISRTSHVNVVTLLG 388
LG+G + +V + L A+K+L K N ++ E +SR H V L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 389 FCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ + + NG L K+I + S E + I LEYLH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLH--- 147
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE+
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSN----VAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G+G +G V++G + N VA+K + S E+F+ E ++ + H ++V L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G E +I E + G L F+ + + L +L+ A ++ L YL
Sbjct: 75 GVITENPV-WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLE--- 125
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
S R +H DI N+L+ + C K+ DFGL++ + + + + ++APE
Sbjct: 126 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPE 179
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASISRTSHVNVVTLLG 388
LG+G + +V + L A+K+L K N ++ E +SR H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 389 FCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ + + NG L K+I + S E + I LEYLH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLH--- 149
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE+
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 333 KLGQGGYGSVY--KGKLIDGSNVAVKVLND---SKGNGEEFINEVASISRTSHVNVVTLL 387
KLG G YG V + K+ A+K++ S + + + EVA + H N++ L
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVER-AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 388 GFCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
F + R L+ E G L ++ I+R K I + G+ YLH
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIHR-------MKFNEVDAAVIIKQVLSGVTYLH-- 153
Query: 447 CSTRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEV 503
I+H D+KP N+LL ++D KI DFGL+ + ++ M GT YIAPEV
Sbjct: 154 -KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK---KMKERLGTAYYIAPEV 209
Query: 504 FCRNIGE 510
+ E
Sbjct: 210 LRKKYDE 216
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSN----VAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G+G +G V++G + N VA+K + S E+F+ E ++ + H ++V L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G E +I E + G L F+ + + L +L+ A ++ L YL
Sbjct: 106 GVITENPV-WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLE--- 156
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
S R +H DI N+L+ + C K+ DFGL++ + + + + ++APE
Sbjct: 157 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPE 210
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 24/195 (12%)
Query: 329 SFKYKLGQGGYGSVYKG------KLIDGSNVAVKVLNDSK--GNGEEFINEVASISRT-S 379
SF LG G +G V + K VAVK+L S E ++E+ +S +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLL--------- 430
H+N+V LLG C G +I E+ G L F+ R S K + +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 431 ---QIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 487
+ +A+G+ +L S +H D+ NILL KI DFGLA+ + +
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 488 SMTGARGTVGYIAPE 502
AR V ++APE
Sbjct: 226 VKGNARLPVKWMAPE 240
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASISRTSHVNVVTLLG 388
LG+G + +V + L A+K+L K N ++ E +SR H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 389 FCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ + + NG L K+I + S E + I LEYLH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLH--- 149
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE+
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 24/195 (12%)
Query: 329 SFKYKLGQGGYGSVYKG------KLIDGSNVAVKVLNDSK--GNGEEFINEVASISRT-S 379
SF LG G +G V + K VAVK+L S E ++E+ +S +
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLL--------- 430
H+N+V LLG C G +I E+ G L F+ R S K + +
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 431 ---QIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 487
+ +A+G+ +L S +H D+ NILL KI DFGLA+ + +
Sbjct: 164 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 488 SMTGARGTVGYIAPE 502
AR V ++APE
Sbjct: 221 VKGNARLPVKWMAPE 235
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASISRTSHVNVVTLLG 388
LG+G + +V + L A+K+L K N ++ E +SR H V L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 99
Query: 389 FCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ + + NG L K+I + S E + I LEYLH
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLH--- 150
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE+
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASISRTSHVNVVTLLG 388
LG+G + +V + L A+K+L K N ++ E +SR H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 389 FCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ + + NG L K+I + S E + I LEYLH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLH--- 149
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE+
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 21/179 (11%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLGFC 390
+G+G +G VY G+ VA+++++ + N ++ F EV + +T H NVV +G C
Sbjct: 41 IGKGRFGQVYHGRW--HGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
A+I +L + ++ +K QIA I +G+ YLH +
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR-----QIAQEIVKGMGYLH---AKG 150
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKI-----CNRKESIISMTGARGTVGYIAPEVF 504
ILH D+K N+ D I+DFGL I R+E + + G + ++APE+
Sbjct: 151 ILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQN--GWLCHLAPEII 206
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 24/195 (12%)
Query: 329 SFKYKLGQGGYGSVYKG------KLIDGSNVAVKVLNDSK--GNGEEFINEVASISRT-S 379
SF LG G +G V + K VAVK+L S E ++E+ +S +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLL--------- 430
H+N+V LLG C G +I E+ G L F+ R S K + +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 431 ---QIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 487
+ +A+G+ +L S +H D+ NILL KI DFGLA+ + +
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 488 SMTGARGTVGYIAPE 502
AR V ++APE
Sbjct: 226 VKGNARLPVKWMAPE 240
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASISRTSHVNVVTLLG 388
LG+G + +V + L A+K+L K N ++ E +SR H V L
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 101
Query: 389 FCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ + + NG L K+I + S E + I LEYLH
Sbjct: 102 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLH--- 152
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE+
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSN----VAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G+G +G V++G + N VA+K + S E+F+ E ++ + H ++V L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G E +I E + G L F+ + + L +L+ A ++ L YL
Sbjct: 83 GVITENPV-WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLE--- 133
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
S R +H DI N+L+ + C K+ DFGL++ + + + + ++APE
Sbjct: 134 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPE 187
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSN----VAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G+G +G V++G + N VA+K + S E+F+ E ++ + H ++V L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G E +I E + G L F+ + + L +L+ A ++ L YL
Sbjct: 80 GVITENPV-WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLE--- 130
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
S R +H DI N+L+ + C K+ DFGL++ + + + + ++APE
Sbjct: 131 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPE 184
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLGF 389
LG+G +G V K K I AVKV+N + ++ + EV + + H N++ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ ++ E + G L I I+ + + +I + G+ Y+H
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGITYMH---KH 140
Query: 450 RILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+KP NILL ++D KI DFGL+ C ++ + M GT YIAPEV
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNT--KMKDRIGTAYYIAPEVL 195
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLGF 389
LG+G +G V K K I AVKV+N + ++ + EV + + H N++ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ ++ E + G L I I+ + + +I + G+ Y+H
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGITYMH---KH 140
Query: 450 RILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+KP NILL ++D KI DFGL+ C ++ + M GT YIAPEV
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNT--KMKDRIGTAYYIAPEVL 195
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSN----VAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G+G +G V++G + N VA+K + S E+F+ E ++ + H ++V L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G E +I E + G L F+ + + L +L+ A ++ L YL
Sbjct: 81 GVITENPV-WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLE--- 131
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
S R +H DI N+L+ + C K+ DFGL++ + + + + ++APE
Sbjct: 132 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPE 185
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASISRTSHVNVVTLLG 388
LG+G + +V + L A+K+L K N ++ E +SR H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 389 FCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ + + NG L K+I + S E + I LEYLH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLH--- 149
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE+
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 31/179 (17%)
Query: 328 NSFKY--KLGQGGYGSVYKGKLI------DGSNVAVKVLND--SKGNGEEFINEVASISR 377
N+ +Y +G+G +G V++ + + VAVK+L + S +F E A ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 378 TSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNS------------------SSI 419
+ N+V LLG C G+ L++E+++ G L +F+ S SS
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 420 ENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK 478
L+ L IA +A G+ YL + +H D+ N L+ E+ KI+DFGL++
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 87/188 (46%), Gaps = 38/188 (20%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G YGSV + K G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKT--GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 388 GFCFEGRRRALIYEFVSNGSLEKF--IYRNS--------SSIENHKLTWETLLQIAVGIA 437
F SLE+F +Y + + ++ KLT + + + I
Sbjct: 88 DV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQIL 135
Query: 438 RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVG 497
RGL+Y+H S I+H D+KP N+ ++ED KI DFGLA+ + + MTG T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 498 YIAPEVFC 505
Y APE+
Sbjct: 188 YRAPEIML 195
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 333 KLGQGGYGSVYK-GKLIDGSNVAVK-VLNDSKGNGEEFINEVASISRTSHVNVVTLLGFC 390
+LG G +G V++ + G+N A K V+ + + E E+ ++S H +V L
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
+ +IYEF+S G L + + + E++K++ + ++ + +GL ++H
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKV-----ADEHNKMSEDEAVEYMRQVCKGLCHMH---ENN 169
Query: 451 ILHFDIKPHNILLDEDFCP--KISDFGLAKICNRKESIISMTGARGTVGYIAPEV 503
+H D+KP NI+ K+ DFGL + K+S+ T GT + APEV
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEV 221
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASISRTSHVNVVTLLG 388
LG+G + +V + L A+K+L K N ++ E +SR H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 389 FCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ + + NG L K+I + S E + I LEYLH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFY------TAEIVSALEYLH--- 149
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE+
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDS---KGNGEEFIN-EVASISRTSHVNVVTLLG 388
LG+G + +V + L A+K+L K N ++ E +SR H V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 98
Query: 389 FCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ + + NG L K+I + S E + I LEYLH
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLH--- 149
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE+
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 13/150 (8%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVA----VKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG+V+K K + + V++ +D +G + E+ + H N+V L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
++ L++EF + L+K Y +S N L E + + +GL + H S
Sbjct: 69 VLHSDKKLTLVFEFC-DQDLKK--YFDSC---NGDLDPEIVKSFLFQLLKGLGFCH---S 119
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAK 478
+LH D+KP N+L++ + K++DFGLA+
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 334 LGQGGYGS-VYKGKLIDGSNVAVKVLNDS---KGNGEEFIN-EVASISRTSHVNVVTLLG 388
LG+G + + V +L A+K+L K N ++ E +SR H V L
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 96
Query: 389 FCFEGRRRALI-YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ + + NG L K+I + S E + I LEYLH
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLH--- 147
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
I+H D+KP NILL+ED +I+DFG AK+ + + GT Y++PE+
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLGF 389
LG+G +G V K K I AVKV+N + ++ + EV + + H N++ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ ++ E + G L I I+ + + +I + G+ Y+H
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGITYMH---KH 140
Query: 450 RILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+KP NILL ++D KI DFGL+ C ++ + M GT YIAPEV
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNT--KMKDRIGTAYYIAPEVL 195
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 22/178 (12%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGE--EFINEVASISRTSHVNVVTLL-GF 389
+LG G +G VYK + + S +A + D+K E +++ E+ ++ H N+V LL F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+E LI EF + G+++ + + T QI V + L+ L+
Sbjct: 104 YYENNLWILI-EFCAGGAVDAVMLELERPL--------TESQIQVVCKQTLDALNYLHDN 154
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLA----KICNRKESIISMTGARGTVGYIAPEV 503
+I+H D+K NIL D K++DFG++ + R++ I GT ++APEV
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI------GTPYWMAPEV 206
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSN----VAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G+G +G V++G + N VA+K + S E+F+ E ++ + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G E +I E + G L F+ + L +L+ A ++ L YL
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAYLE--- 128
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
S R +H DI N+L+ + C K+ DFGL++ + G + + ++APE
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG-KLPIKWMAPE 182
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 38/188 (20%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G YGSV Y K G +AVK L+ S + + E+ + H NV+ LL
Sbjct: 59 VGSGAYGSVCSSYDVK--SGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 116
Query: 388 GFCFEGRRRALIYEFVSNGSLEKF------IYRNSSSIEN----HKLTWETLLQIAVGIA 437
F SLE+F + + + N KLT + + + I
Sbjct: 117 DV------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 164
Query: 438 RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVG 497
RGL+Y+H S I+H D+KP N+ ++ED KI DFGLA+ + + MTG T
Sbjct: 165 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 216
Query: 498 YIAPEVFC 505
Y APE+
Sbjct: 217 YRAPEIML 224
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 333 KLGQGGYGSVYK-GKLIDGSNVAVK-VLNDSKGNGEEFINEVASISRTSHVNVVTLLGFC 390
+LG G +G V++ + G+N A K V+ + + E E+ ++S H +V L
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
+ +IYEF+S G L + + + E++K++ + ++ + +GL ++H
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKV-----ADEHNKMSEDEAVEYMRQVCKGLCHMH---ENN 275
Query: 451 ILHFDIKPHNILLDEDFCP--KISDFGLAKICNRKESIISMTGARGTVGYIAPEV 503
+H D+KP NI+ K+ DFGL + K+S+ T GT + APEV
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEV 327
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 90/185 (48%), Gaps = 26/185 (14%)
Query: 334 LGQGGYGSVYKGKLI----DGSNVAVKVLNDSKGNGEEFIN---EVASISRTSHVNVVTL 386
LGQG +G V+ + + G A+KVL + + + E ++ +H VV L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 387 -LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
F EG+ LI +F+ G L R S + T E + +A GL++LH
Sbjct: 96 HYAFQTEGKL-YLILDFLRGGDL---FTRLSKEV---MFTEEDVKFYLAELALGLDHLH- 147
Query: 446 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR---GTVGYIAPE 502
S I++ D+KP NILLDE+ K++DFGL+ KE+I A GTV Y+APE
Sbjct: 148 --SLGIIYRDLKPENILLDEEGHIKLTDFGLS-----KEAIDHEKKAYSFCGTVEYMAPE 200
Query: 503 VFCRN 507
V R
Sbjct: 201 VVNRQ 205
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 334 LGQGGYGSVYKGKLID---GSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G YGSV ID G VA+K L+ S+ + E+ + H NV+ LL
Sbjct: 32 VGSGAYGSVCSA--IDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
Y+F + F+ + I K + E + + + +GL+Y+H
Sbjct: 90 DVFTPASSLRNFYDFYL---VMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH--- 143
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S ++H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APEV
Sbjct: 144 SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVIL 196
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 333 KLGQGGYG-SVYKGKLIDGSNVAVKVLNDSKGNG---EEFINEVASISRTSHVNVVTLLG 388
K+G+G +G ++ DG +K +N S+ + EE EVA ++ H N+V
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSI--ENHKLTWETLLQIAVGIARGLEYLHLG 446
E ++ ++ G L K I + E+ L W V I L+++H
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW------FVQICLALKHVH-- 142
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGA-RGTVGYIAPEVFC 505
+ILH DIK NI L +D ++ DFG+A++ N S + + A GT Y++PE+ C
Sbjct: 143 -DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN---STVELARACIGTPYYLSPEI-C 197
Query: 506 RN 507
N
Sbjct: 198 EN 199
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 95 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 148
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 200
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 26/182 (14%)
Query: 334 LGQGGYGSVY--KGKLIDGSNVAVKVLND----SKGNGEEFINEVASISRTSHVNVVTLL 387
LG+G +G V K K I G AVKV++ K + E + EV + + H N++ L
Sbjct: 40 LGKGSFGEVILCKDK-ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 388 GFCFEGRRRALIYEFVSNGSL-EKFIYRNS-SSIENHKLTWETLLQIAVGIARGLEYLHL 445
F + L+ E + G L ++ I R S ++ ++ + L G+ Y+H
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL--------SGITYMH- 149
Query: 446 GCSTRILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
+I+H D+KP N+LL+ +D +I DFGL+ E+ M GT YIAPE
Sbjct: 150 --KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIAPE 204
Query: 503 VF 504
V
Sbjct: 205 VL 206
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 95 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 148
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 200
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 26/182 (14%)
Query: 334 LGQGGYGSVY--KGKLIDGSNVAVKVLND----SKGNGEEFINEVASISRTSHVNVVTLL 387
LG+G +G V K K I G AVKV++ K + E + EV + + H N++ L
Sbjct: 34 LGKGSFGEVILCKDK-ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 388 GFCFEGRRRALIYEFVSNGSL-EKFIYRNS-SSIENHKLTWETLLQIAVGIARGLEYLHL 445
F + L+ E + G L ++ I R S ++ ++ + L G+ Y+H
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL--------SGITYMH- 143
Query: 446 GCSTRILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
+I+H D+KP N+LL+ +D +I DFGL+ E+ M GT YIAPE
Sbjct: 144 --KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIAPE 198
Query: 503 VF 504
V
Sbjct: 199 VL 200
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 85/186 (45%), Gaps = 34/186 (18%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKF--IYRNS--------SSIENHKLTWETLLQIAVGIARG 439
F SLE+F +Y + + ++ KLT + + + I RG
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYI 499
L+Y+H S I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYR 189
Query: 500 APEVFC 505
APE+
Sbjct: 190 APEIML 195
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKL 424
EE EV+ + + H NV+TL +E R LI E VS G L F+ + S L
Sbjct: 60 EEIEREVSILRQVLHHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKES------L 112
Query: 425 TWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKIC 480
+ E I G+ YLH + +I HFD+KP NI+L + P K+ DFGLA
Sbjct: 113 SEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--- 166
Query: 481 NRKESIISMTGARGTVGYIAPEV 503
+ E + GT ++APE+
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEI 189
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 82/184 (44%), Gaps = 26/184 (14%)
Query: 333 KLGQGGYGSVYK-GKLIDGSNVAVKVLNDSKGNG-------EEFINEVASISRTSHVNVV 384
+LG G + V K + G A K + + EE EV+ + + H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 385 TLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYL 443
TL +E R LI E VS G L F+ + S L+ E I G+ YL
Sbjct: 79 TLHD-VYENRTDVVLILELVSGGELFDFLAQKES------LSEEEATSFIKQILDGVNYL 131
Query: 444 HLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICNRKESIISMTGARGTVGYI 499
H + +I HFD+KP NI+L + P K+ DFGLA + E + GT ++
Sbjct: 132 H---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFKNIFGTPEFV 185
Query: 500 APEV 503
APE+
Sbjct: 186 APEI 189
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKL 424
EE EV+ + + H NV+TL +E R LI E VS G L F+ + S L
Sbjct: 60 EEIEREVSILRQVLHHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKES------L 112
Query: 425 TWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKIC 480
+ E I G+ YLH + +I HFD+KP NI+L + P K+ DFGLA
Sbjct: 113 SEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--- 166
Query: 481 NRKESIISMTGARGTVGYIAPEV 503
+ E + GT ++APE+
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEI 189
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKL 424
EE EV+ + + H NV+TL +E R LI E VS G L F+ + S L
Sbjct: 60 EEIEREVSILRQVLHHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKES------L 112
Query: 425 TWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKIC 480
+ E I G+ YLH + +I HFD+KP NI+L + P K+ DFGLA
Sbjct: 113 SEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--- 166
Query: 481 NRKESIISMTGARGTVGYIAPEV 503
+ E + GT ++APE+
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEI 189
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 101 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 154
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 155 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 206
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 96 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 149
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 201
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 100 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 153
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 154 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 205
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKL 424
EE EV+ + + H NV+TL +E R LI E VS G L F+ + S L
Sbjct: 60 EEIEREVSILRQVLHHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKES------L 112
Query: 425 TWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKIC 480
+ E I G+ YLH + +I HFD+KP NI+L + P K+ DFGLA
Sbjct: 113 SEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--- 166
Query: 481 NRKESIISMTGARGTVGYIAPEV 503
+ E + GT ++APE+
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEI 189
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGXVATRWYRAPEIML 195
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 16/175 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSN----VAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G+G +G V++G + N VA+K + S E+F+ E ++ + H ++V L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G E +I E + G L F+ + L +L+ A ++ L YL
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAYLE--- 128
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
S R +H DI N+L+ C K+ DFGL++ + + + + ++APE
Sbjct: 129 SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPE 182
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSN----VAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G+G +G V++G + N VA+K + S E+F+ E ++ + H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G E +I E + G L F+ + L +L+ A ++ L YL
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAYLE--- 508
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
S R +H DI N+L+ + C K+ DFGL++ + + + + ++APE
Sbjct: 509 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPE 562
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKL 424
EE EV+ + + H NV+TL +E R LI E VS G L F+ + S L
Sbjct: 60 EEIEREVSILRQVLHHNVITLHD-VYENRTDVVLILELVSGGELFDFLAQKES------L 112
Query: 425 TWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKIC 480
+ E I G+ YLH + +I HFD+KP NI+L + P K+ DFGLA
Sbjct: 113 SEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--- 166
Query: 481 NRKESIISMTGARGTVGYIAPEV 503
+ E + GT ++APE+
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEI 189
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 86 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 139
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 191
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 21/189 (11%)
Query: 334 LGQGGYGSVYK-GKLIDGSNVAVKVLNDSKG--NGEEFINEVASISRTSHVNVVTLLGFC 390
LG G +G V+K + G +A K++ ++G + EE NE++ +++ H N++ L
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIK-TRGMKDKEEVKNEISVMNQLDHANLIQLYD-A 154
Query: 391 FEGRRR-ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
FE + L+ E+V G L I E++ LT + I G+ ++H
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIID-----ESYNLTELDTILFMKQICEGIRHMH---QM 206
Query: 450 RILHFDIKPHNIL-LDEDFCP-KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
ILH D+KP NIL ++ D KI DFGLA+ +E + GT ++APEV N
Sbjct: 207 YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKVNFGTPEFLAPEVV--N 261
Query: 508 IGEVSYKSD 516
VS+ +D
Sbjct: 262 YDFVSFPTD 270
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 92 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 145
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 146 ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 197
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 96 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 149
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 150 ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 201
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 109 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 162
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 214
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 320 YADIKKMTNSFKYKLGQGGYGSVYKG--KLIDGSNVAVKVLNDSKGNG----EEFINEVA 373
Y D K +T K +LG G +G+V KG ++ + ++ N +E + E
Sbjct: 22 YLDRKLLTLEDK-ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 80
Query: 374 SISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIA 433
+ + + +V ++G C E L+ E G L K++ +N + + ++++
Sbjct: 81 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN------IIELV 133
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGA 492
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T
Sbjct: 134 HQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 190
Query: 493 RGTVGYIAPEVFCRNIGEVSYKSD 516
+ V + APE C N + S KSD
Sbjct: 191 KWPVKWYAPE--CINYYKFSSKSD 212
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 320 YADIKKMTNSFKYKLGQGGYGSVYKG--KLIDGSNVAVKVLNDSKGNG----EEFINEVA 373
Y D K +T K +LG G +G+V KG ++ + ++ N +E + E
Sbjct: 22 YLDRKLLTLEDK-ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 80
Query: 374 SISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIA 433
+ + + +V ++G C E L+ E G L K++ +N + + ++++
Sbjct: 81 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN------IIELV 133
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGA 492
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T
Sbjct: 134 HQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 190
Query: 493 RGTVGYIAPEVFCRNIGEVSYKSD 516
+ V + APE C N + S KSD
Sbjct: 191 KWPVKWYAPE--CINYYKFSSKSD 212
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 110 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 163
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 215
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 26/182 (14%)
Query: 334 LGQGGYGSVY--KGKLIDGSNVAVKVLND----SKGNGEEFINEVASISRTSHVNVVTLL 387
LG+G +G V K K I G AVKV++ K + E + EV + + H N++ L
Sbjct: 57 LGKGSFGEVILCKDK-ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 388 GFCFEGRRRALIYEFVSNGSL-EKFIYRNS-SSIENHKLTWETLLQIAVGIARGLEYLHL 445
F + L+ E + G L ++ I R S ++ ++ + L G+ Y+H
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL--------SGITYMH- 166
Query: 446 GCSTRILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
+I+H D+KP N+LL+ +D +I DFGL+ E+ M GT YIAPE
Sbjct: 167 --KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIAPE 221
Query: 503 VF 504
V
Sbjct: 222 VL 223
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 26/182 (14%)
Query: 334 LGQGGYGSVY--KGKLIDGSNVAVKVLND----SKGNGEEFINEVASISRTSHVNVVTLL 387
LG+G +G V K K I G AVKV++ K + E + EV + + H N++ L
Sbjct: 58 LGKGSFGEVILCKDK-ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 388 GFCFEGRRRALIYEFVSNGSL-EKFIYRNS-SSIENHKLTWETLLQIAVGIARGLEYLHL 445
F + L+ E + G L ++ I R S ++ ++ + L G+ Y+H
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL--------SGITYMH- 167
Query: 446 GCSTRILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
+I+H D+KP N+LL+ +D +I DFGL+ E+ M GT YIAPE
Sbjct: 168 --KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIAPE 222
Query: 503 VF 504
V
Sbjct: 223 VL 224
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 320 YADIKKMTNSFKYKLGQGGYGSVYKG--KLIDGSNVAVKVLNDSKGNG----EEFINEVA 373
Y D K +T K +LG G +G+V KG ++ + ++ N +E + E
Sbjct: 20 YLDRKLLTLEDK-ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 78
Query: 374 SISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIA 433
+ + + +V ++G C E L+ E G L K++ +N + + ++++
Sbjct: 79 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------KNIIELV 131
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGA 492
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T
Sbjct: 132 HQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 188
Query: 493 RGTVGYIAPEVFCRNIGEVSYKSD 516
+ V + APE C N + S KSD
Sbjct: 189 KWPVKWYAPE--CINYYKFSSKSD 210
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 95 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 148
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 200
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 89 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 142
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 143 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 194
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKG-KLIDGSNVAVKVLN--DSKGNGEEFINEVASISRT 378
D+ +Y +G+G YG V + + VA+K ++ + + + + E+ + R
Sbjct: 40 DVGPRYTQLQY-IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRF 98
Query: 379 SHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIAR 438
H NV+ + A+ ++ +E +Y+ +++ +L+ + + I R
Sbjct: 99 RHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYK---LLKSQQLSNDHICYFLYQILR 155
Query: 439 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVG 497
GL+Y+H S +LH D+KP N+L++ KI DFGLA+I + + +T T
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 498 YIAPEVFCRNIG 509
Y APE+ + G
Sbjct: 213 YRAPEIMLNSKG 224
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 87 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 140
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 192
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 320 YADIKKMTNSFKYKLGQGGYGSVYKG--KLIDGSNVAVKVLNDSKGNG----EEFINEVA 373
Y D K +T K +LG G +G+V KG ++ + ++ N +E + E
Sbjct: 6 YLDRKLLTLEDK-ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 64
Query: 374 SISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIA 433
+ + + +V ++G C E L+ E G L K++ +N + + ++++
Sbjct: 65 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------KNIIELV 117
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGA 492
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T
Sbjct: 118 HQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG 174
Query: 493 RGTVGYIAPEVFCRNIGEVSYKSD 516
+ V + APE C N + S KSD
Sbjct: 175 KWPVKWYAPE--CINYYKFSSKSD 196
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 87 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 140
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 192
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 97 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 150
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 202
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 96 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 149
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 201
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 95 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 148
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 200
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 92 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 145
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 197
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 96 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 149
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 201
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 334 LGQGGYGSVYKGKLID---GSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G YGSV ID G VA+K L+ S+ + E+ + H NV+ LL
Sbjct: 50 VGSGAYGSVCSA--IDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
Y+F + F+ + I + + E + + + +GL+Y+H
Sbjct: 108 DVFTPASSLRNFYDFYL---VMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH--- 161
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S ++H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APEV
Sbjct: 162 SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVIL 214
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 92 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 145
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 197
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 88 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 141
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 142 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 193
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 86 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 139
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 191
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 102 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 155
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 207
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 92 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 145
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 197
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 22/180 (12%)
Query: 333 KLGQGGYGSVYKGKL-IDGSNVAVKVLNDSKGNGEEFI-NEVASISRTSHVNVVTLLGFC 390
K+G+G G V + G VAVK ++ K E + NEV + H NVV +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
G ++ EF+ G+L + ++ E + + + + + L LH +
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHT-------RMNEEQIAAVCLAVLQALSVLH---AQG 267
Query: 451 ILHFDIKPHNILLDEDFCPKISDFG----LAKICNRKESIISMTGARGTVGYIAPEVFCR 506
++H DIK +ILL D K+SDFG ++K R++ ++ GT ++APE+ R
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISR 321
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 320 YADIKKMTNSFKYKLGQGGYGSVYKG--KLIDGSNVAVKVLNDSKGNG----EEFINEVA 373
Y D K +T K +LG G +G+V KG ++ + ++ N +E + E
Sbjct: 2 YLDRKLLTLEDK-ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 60
Query: 374 SISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIA 433
+ + + +V ++G C E L+ E G L K++ +N + + ++++
Sbjct: 61 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------KNIIELV 113
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGA 492
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T
Sbjct: 114 HQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 170
Query: 493 RGTVGYIAPEVFCRNIGEVSYKSD 516
+ V + APE C N + S KSD
Sbjct: 171 KWPVKWYAPE--CINYYKFSSKSD 192
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 320 YADIKKMTNSFKYKLGQGGYGSVYKG--KLIDGSNVAVKVLNDSKGNG----EEFINEVA 373
Y D K +T K +LG G +G+V KG ++ + ++ N +E + E
Sbjct: 6 YLDRKLLTLEDK-ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 64
Query: 374 SISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIA 433
+ + + +V ++G C E L+ E G L K++ +N + + ++++
Sbjct: 65 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------KNIIELV 117
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGA 492
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T
Sbjct: 118 HQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 174
Query: 493 RGTVGYIAPEVFCRNIGEVSYKSD 516
+ V + APE C N + S KSD
Sbjct: 175 KWPVKWYAPE--CINYYKFSSKSD 196
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 195
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 22/180 (12%)
Query: 333 KLGQGGYGSVYKGKL-IDGSNVAVKVLNDSKGNGEEFI-NEVASISRTSHVNVVTLLGFC 390
K+G+G G V + G VAVK ++ K E + NEV + H NVV +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
G ++ EF+ G+L + + + ++ E + + + + + L LH +
Sbjct: 96 LVGDELWVVMEFLEGGAL-------TDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQG 145
Query: 451 ILHFDIKPHNILLDEDFCPKISDFG----LAKICNRKESIISMTGARGTVGYIAPEVFCR 506
++H DIK +ILL D K+SDFG ++K R++ ++ GT ++APE+ R
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISR 199
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 86/190 (45%), Gaps = 25/190 (13%)
Query: 329 SFKYKLGQGGYGSVYKGKLID-GSNVAVKVLND--SKGNGEEFINEVASISRTSHVNVVT 385
K +LG GG+G V + D G VA+K S N E + E+ + + +H NVV+
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 386 LLGFCFEGRRRA------LIYEFVSNGSLEKFI--YRNSSSIENHKLTWETLLQIAVGIA 437
++ A L E+ G L K++ + N ++ + TLL I+
Sbjct: 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI--RTLLS---DIS 131
Query: 438 RGLEYLHLGCSTRILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARG 494
L YLH RI+H D+KP NI+L + KI D G AK ++ E G
Sbjct: 132 SALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---G 185
Query: 495 TVGYIAPEVF 504
T+ Y+APE+
Sbjct: 186 TLQYLAPELL 195
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 102 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 155
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 207
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 101 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 154
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 155 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 206
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 102 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 155
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 207
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 110 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 163
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 215
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 86/190 (45%), Gaps = 25/190 (13%)
Query: 329 SFKYKLGQGGYGSVYKGKLID-GSNVAVKVLND--SKGNGEEFINEVASISRTSHVNVVT 385
K +LG GG+G V + D G VA+K S N E + E+ + + +H NVV+
Sbjct: 18 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 386 LLGFCFEGRRRA------LIYEFVSNGSLEKFI--YRNSSSIENHKLTWETLLQIAVGIA 437
++ A L E+ G L K++ + N ++ + TLL I+
Sbjct: 78 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI--RTLLS---DIS 132
Query: 438 RGLEYLHLGCSTRILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARG 494
L YLH RI+H D+KP NI+L + KI D G AK ++ E G
Sbjct: 133 SALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---G 186
Query: 495 TVGYIAPEVF 504
T+ Y+APE+
Sbjct: 187 TLQYLAPELL 196
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 320 YADIKKMTNSFKYKLGQGGYGSVYKG--KLIDGSNVAVKVLNDSKGNG----EEFINEVA 373
Y D K +T K +LG G +G+V KG ++ + ++ N +E + E
Sbjct: 12 YLDRKLLTLEDK-ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 70
Query: 374 SISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIA 433
+ + + +V ++G C E L+ E G L K++ +N + + ++++
Sbjct: 71 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------KNIIELV 123
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGA 492
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T
Sbjct: 124 HQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 180
Query: 493 RGTVGYIAPEVFCRNIGEVSYKSD 516
+ V + APE C N + S KSD
Sbjct: 181 KWPVKWYAPE--CINYYKFSSKSD 202
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 109 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 162
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 214
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 13/150 (8%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVA----VKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG+V+K K + + V++ +D +G + E+ + H N+V L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
++ L++EF + L+K Y +S N L E + + +GL + H S
Sbjct: 69 VLHSDKKLTLVFEFC-DQDLKK--YFDSC---NGDLDPEIVKSFLFQLLKGLGFCH---S 119
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAK 478
+LH D+KP N+L++ + K+++FGLA+
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 22/180 (12%)
Query: 333 KLGQGGYGSVYKGKL-IDGSNVAVKVLNDSKGNGEEFI-NEVASISRTSHVNVVTLLGFC 390
K+G+G G V + G VAVK ++ K E + NEV + H NVV +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
G ++ EF+ G+L + + + ++ E + + + + + L LH +
Sbjct: 87 LVGDELWVVMEFLEGGAL-------TDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQG 136
Query: 451 ILHFDIKPHNILLDEDFCPKISDFG----LAKICNRKESIISMTGARGTVGYIAPEVFCR 506
++H DIK +ILL D K+SDFG ++K R++ ++ GT ++APE+ R
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISR 190
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 16/175 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSN----VAVKVLND--SKGNGEEFINEVASISRTSHVNVVTLL 387
+G+G +G V++G + N VA+K + S E+F+ E ++ + H ++V L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G E +I E + G L F+ + L +L+ A ++ L YL
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAYLE--- 508
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
S R +H DI N+L+ C K+ DFGL++ + + + + ++APE
Sbjct: 509 SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPE 562
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 82/189 (43%), Gaps = 40/189 (21%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENH-------------KLTWETLLQIAVGI 436
F SLE+F N + H KLT + + + I
Sbjct: 86 ------------FTPARSLEEF---NDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQI 130
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTV 496
RGL+Y+H S I+H D+KP N+ ++ED KI DFGLA+ + + MTG T
Sbjct: 131 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 182
Query: 497 GYIAPEVFC 505
Y APE+
Sbjct: 183 WYRAPEIML 191
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 113 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 166
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + MTG T Y APE+
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIML 218
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 22/180 (12%)
Query: 333 KLGQGGYGSVYKGKL-IDGSNVAVKVLNDSKGNGEEFI-NEVASISRTSHVNVVTLLGFC 390
K+G+G G V + G VAVK ++ K E + NEV + H NVV +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
G ++ EF+ G+L + + + ++ E + + + + + L LH +
Sbjct: 98 LVGDELWVVMEFLEGGAL-------TDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQG 147
Query: 451 ILHFDIKPHNILLDEDFCPKISDFG----LAKICNRKESIISMTGARGTVGYIAPEVFCR 506
++H DIK +ILL D K+SDFG ++K R++ ++ GT ++APE+ R
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISR 201
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 320 YADIKKMTNSFKYKLGQGGYGSVYKG--KLIDGSNVAVKVLNDSKGNG----EEFINEVA 373
Y D K +T K +LG G +G+V KG ++ + ++ N +E + E
Sbjct: 364 YLDRKLLTLEDK-ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 422
Query: 374 SISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIA 433
+ + + +V ++G C E L+ E G L K++ +N + + ++++
Sbjct: 423 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------KNIIELV 475
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGA 492
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T
Sbjct: 476 HQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 532
Query: 493 RGTVGYIAPEVFCRNIGEVSYKSD 516
+ V + APE C N + S KSD
Sbjct: 533 KWPVKWYAPE--CINYYKFSSKSD 554
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 22/180 (12%)
Query: 333 KLGQGGYGSVYKGKL-IDGSNVAVKVLNDSKGNGEEFI-NEVASISRTSHVNVVTLLGFC 390
K+G+G G V + G VAVK ++ K E + NEV + H NVV +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
G ++ EF+ G+L + + + ++ E + + + + + L LH +
Sbjct: 141 LVGDELWVVMEFLEGGAL-------TDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQG 190
Query: 451 ILHFDIKPHNILLDEDFCPKISDFG----LAKICNRKESIISMTGARGTVGYIAPEVFCR 506
++H DIK +ILL D K+SDFG ++K R++ ++ GT ++APE+ R
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISR 244
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 22/180 (12%)
Query: 333 KLGQGGYGSVYKGKL-IDGSNVAVKVLNDSKGNGEEFI-NEVASISRTSHVNVVTLLGFC 390
K+G+G G V + G VAVK ++ K E + NEV + H NVV +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
G ++ EF+ G+L + + + ++ E + + + + + L LH +
Sbjct: 91 LVGDELWVVMEFLEGGAL-------TDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQG 140
Query: 451 ILHFDIKPHNILLDEDFCPKISDFG----LAKICNRKESIISMTGARGTVGYIAPEVFCR 506
++H DIK +ILL D K+SDFG ++K R++ ++ GT ++APE+ R
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISR 194
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 97 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 150
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA + + MTG T Y APE+
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTADEMTGYVATRWYRAPEIML 202
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 97 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 150
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA + + MTG T Y APE+
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTADEMTGYVATRWYRAPEIML 202
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 97 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 150
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA + + MTG T Y APE+
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTADEMTGYVATRWYRAPEIML 202
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 66/145 (45%), Gaps = 22/145 (15%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLT 425
E+ EV+ + H NV+TL LI E V+ G L F+ E LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL------AEKESLT 112
Query: 426 WETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLA---K 478
E + I G+ YLH S +I HFD+KP NI+L + P KI DFGLA
Sbjct: 113 EEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 479 ICNRKESIISMTGARGTVGYIAPEV 503
N ++I GT ++APE+
Sbjct: 170 FGNEFKNIF------GTPAFVAPEI 188
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 320 YADIKKMTNSFKYKLGQGGYGSVYKG--KLIDGSNVAVKVLNDSKGNG----EEFINEVA 373
Y D K +T K +LG G +G+V KG ++ + ++ N +E + E
Sbjct: 365 YLDRKLLTLEDK-ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 423
Query: 374 SISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIA 433
+ + + +V ++G C E L+ E G L K++ +N + + ++++
Sbjct: 424 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------KNIIELV 476
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGA 492
++ G++YL + +H D+ N+LL KISDFGL+K E+ + T
Sbjct: 477 HQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 533
Query: 493 RGTVGYIAPEVFCRNIGEVSYKSD 516
+ V + APE C N + S KSD
Sbjct: 534 KWPVKWYAPE--CINYYKFSSKSD 555
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 85/186 (45%), Gaps = 34/186 (18%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKF--IYRNS--------SSIENHKLTWETLLQIAVGIARG 439
F SLE+F +Y + + +++ KLT + + + I RG
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRG 137
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYI 499
L+Y+H S I+H D+KP N+ ++ED KI DFGL + + + MTG T Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE-----MTGYVATRWYR 189
Query: 500 APEVFC 505
APE+
Sbjct: 190 APEIML 195
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 38/188 (20%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G YGSV Y +L VAVK L+ S + E+ + H NV+ LL
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 388 GFCFEGRRRALIYEFVSNGSLEKF--IYRNSS--------SIENHKLTWETLLQIAVGIA 437
F S+E F +Y ++ +++ L+ E + + +
Sbjct: 94 DV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLL 141
Query: 438 RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVG 497
RGL+Y+H S I+H D+KP N+ ++ED +I DFGLA+ + + MTG T
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRW 193
Query: 498 YIAPEVFC 505
Y APE+
Sbjct: 194 YRAPEIML 201
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 23/185 (12%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK---GNGEEF-INE--VASISRTSHVNVVTL 386
+G+GG+G VY + D G A+K L+ + GE +NE + S+ T +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 387 LGFCFEGRRR-ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQI-AVGIARGLEYLH 444
+ + F + + I + ++ G L + H + E ++ A I GLE++H
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLH-------YHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
+ +++ D+KP NILLDE +ISD GLA ++K+ S+ GT GY+APEV
Sbjct: 310 ---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVL 362
Query: 505 CRNIG 509
+ +
Sbjct: 363 QKGVA 367
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 23/185 (12%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK---GNGEEF-INE--VASISRTSHVNVVTL 386
+G+GG+G VY + D G A+K L+ + GE +NE + S+ T +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 387 LGFCFEGRRR-ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQI-AVGIARGLEYLH 444
+ + F + + I + ++ G L + H + E ++ A I GLE++H
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLH-------YHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
+ +++ D+KP NILLDE +ISD GLA ++K+ S+ GT GY+APEV
Sbjct: 310 ---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVL 362
Query: 505 CRNIG 509
+ +
Sbjct: 363 QKGVA 367
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFIN----EVASISRTSHVNVVTLLG 388
LG G +G V G+ + G VAVK+LN K + + E+ ++ H +++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
++ E+VS G L +I ++ E + L Q I ++Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEE---MEARRLFQ---QILSAVDYCH---R 129
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
++H D+KP N+LLD KI+DFGL+ + + E + + G+ Y APEV
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRDSCGSPNYAAPEVI 182
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 17/176 (9%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFIN----EVASISRTSHVNVVTLLG 388
LG G +G V G+ + G VAVK+LN K + + E+ ++ H +++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
++ E+VS G L +I ++ E + L Q I ++Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEE---MEARRLFQ---QILSAVDYCH---R 129
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
++H D+KP N+LLD KI+DFGL+ + + E + + + G+ Y APEV
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT---SCGSPNYAAPEVI 182
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 23/185 (12%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK---GNGEEF-INE--VASISRTSHVNVVTL 386
+G+GG+G VY + D G A+K L+ + GE +NE + S+ T +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 387 LGFCFEGRRR-ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQI-AVGIARGLEYLH 444
+ + F + + I + ++ G L + H + E ++ A I GLE++H
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLH-------YHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
+ +++ D+KP NILLDE +ISD GLA ++K+ S+ GT GY+APEV
Sbjct: 310 ---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVL 362
Query: 505 CRNIG 509
+ +
Sbjct: 363 QKGVA 367
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 23/185 (12%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK---GNGEEF-INE--VASISRTSHVNVVTL 386
+G+GG+G VY + D G A+K L+ + GE +NE + S+ T +
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 387 LGFCFEGRRR-ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQI-AVGIARGLEYLH 444
+ + F + + I + ++ G L + H + E ++ A I GLE++H
Sbjct: 256 MSYAFHTPDKLSFILDLMNGGDLH-------YHLSQHGVFSEADMRFYAAEIILGLEHMH 308
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
+ +++ D+KP NILLDE +ISD GLA ++K+ S+ GT GY+APEV
Sbjct: 309 ---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVL 361
Query: 505 CRNIG 509
+ +
Sbjct: 362 QKGVA 366
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI D+GLA+ + + MTG T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE-----MTGYVATRWYRAPEIML 195
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 19/186 (10%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFEG 393
+G+G YG V++G L G +VAVK+ + E+ + H N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTS 74
Query: 394 RRRA----LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL---G 446
R + LI + +GSL F+ R + +E H L++AV A GL +LH+ G
Sbjct: 75 RNSSTQLWLITHYHEHGSLYDFLQRQT--LEPH-----LALRLAVSAACGLAHLHVEIFG 127
Query: 447 CSTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM--TGARGTVGYIAPE 502
+ I H D K N+L+ + I+D GLA + ++ + + GT Y+APE
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 503 VFCRNI 508
V I
Sbjct: 188 VLDEQI 193
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 110 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 163
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + M G T Y APE+
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGXVATRWYRAPEIML 215
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLT 425
E+ EV+ + H NV+TL LI E V+ G L F+ E LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL------AEKESLT 112
Query: 426 WETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICN 481
E + I G+ YLH S +I HFD+KP NI+L + P KI DFGLA +
Sbjct: 113 EEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 482 RKESIISMTGARGTVGYIAPEV 503
++ GT ++APE+
Sbjct: 170 FGNEFKNIF---GTPEFVAPEI 188
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 33/195 (16%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKV--LNDSKGNGEEFINEVASISRTSHVNVVTLLGFC 390
LG+GG+G V++ K +D N A+K L + + E+ + EV ++++ H +V
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 391 FEGRRRALIYEFVSNGSLEKFIY--------RNSSSIENHKLTWE-----TLLQIAVGIA 437
E E + S + ++Y N N + T E L I + IA
Sbjct: 73 LEKN----TTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 438 RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISM-------- 489
+E+LH S ++H D+KP NI D K+ DFGL ++ E ++
Sbjct: 129 EAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 490 --TGARGTVGYIAPE 502
TG GT Y++PE
Sbjct: 186 RHTGQVGTKLYMSPE 200
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLT 425
E+ EV+ + H NV+TL LI E V+ G L F+ E LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL------AEKESLT 112
Query: 426 WETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICN 481
E + I G+ YLH S +I HFD+KP NI+L + P KI DFGLA +
Sbjct: 113 EEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 482 RKESIISMTGARGTVGYIAPEV 503
++ GT ++APE+
Sbjct: 170 FGNEFKNIF---GTPEFVAPEI 188
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLT 425
E+ EV+ + H NV+TL LI E V+ G L F+ E LT
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL------AEKESLT 111
Query: 426 WETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICN 481
E + I G+ YLH S +I HFD+KP NI+L + P KI DFGLA +
Sbjct: 112 EEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168
Query: 482 RKESIISMTGARGTVGYIAPEV 503
++ GT ++APE+
Sbjct: 169 FGNEFKNIF---GTPEFVAPEI 187
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 333 KLGQGGYGSVYKG--KLIDGSNVAVKVLNDSKGNG----EEFINEVASISRTSHVNVVTL 386
+LG G +G+V KG ++ + ++ N +E + E + + + +V +
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
+G C E L+ E G L K++ +N + + ++++ ++ G++YL
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------KNIIELVHQVSMGMKYLE-- 122
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII-SMTGARGTVGYIAPEVFC 505
+ +H D+ N+LL KISDFGL+K E+ + T + V + APE C
Sbjct: 123 -ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE--C 179
Query: 506 RNIGEVSYKSD 516
N + S KSD
Sbjct: 180 INYYKFSSKSD 190
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLT 425
E+ EV+ + H NV+TL LI E V+ G L F+ E LT
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL------AEKESLT 111
Query: 426 WETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICN 481
E + I G+ YLH S +I HFD+KP NI+L + P KI DFGLA +
Sbjct: 112 EEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168
Query: 482 RKESIISMTGARGTVGYIAPEV 503
++ GT ++APE+
Sbjct: 169 FGNEFKNIF---GTPEFVAPEI 187
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 66/145 (45%), Gaps = 22/145 (15%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLT 425
E+ EV+ + H NV+TL LI E V+ G L F+ E LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL------AEKESLT 112
Query: 426 WETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLA---K 478
E + I G+ YLH S +I HFD+KP NI+L + P KI DFGLA
Sbjct: 113 EEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 479 ICNRKESIISMTGARGTVGYIAPEV 503
N ++I GT ++APE+
Sbjct: 170 FGNEFKNIF------GTPEFVAPEI 188
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLT 425
E+ EV+ + H NV+TL LI E V+ G L F+ E LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL------AEKESLT 112
Query: 426 WETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICN 481
E + I G+ YLH S +I HFD+KP NI+L + P KI DFGLA +
Sbjct: 113 EEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 482 RKESIISMTGARGTVGYIAPEV 503
++ GT ++APE+
Sbjct: 170 FGNEFKNIF---GTPEFVAPEI 188
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLT 425
E+ EV+ + H NV+TL LI E V+ G L F+ E LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL------AEKESLT 112
Query: 426 WETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICN 481
E + I G+ YLH S +I HFD+KP NI+L + P KI DFGLA +
Sbjct: 113 EEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 482 RKESIISMTGARGTVGYIAPEV 503
++ GT ++APE+
Sbjct: 170 FGNEFKNIF---GTPEFVAPEI 188
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + M G T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIML 195
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLT 425
E+ EV+ + H NV+TL LI E V+ G L F+ E LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL------AEKESLT 112
Query: 426 WETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICN 481
E + I G+ YLH S +I HFD+KP NI+L + P KI DFGLA +
Sbjct: 113 EEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 482 RKESIISMTGARGTVGYIAPEV 503
++ GT ++APE+
Sbjct: 170 FGNEFKNIF---GTPEFVAPEI 188
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + M G T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIML 195
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNV-AVKVLN----DSKGNGEEFINEVASIS 376
D +K+ + + ++G G +G+VY + + S V A+K ++ S ++ I EV +
Sbjct: 12 DPEKLFSDLR-EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAV-- 434
+ H N + G L+ E+ + S +E HK + + AV
Sbjct: 71 KLRHPNTIQYRGCYLREHTAWLVMEYCLGSA--------SDLLEVHKKPLQEVEIAAVTH 122
Query: 435 GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG 494
G +GL YLH S ++H D+K NILL E K+ DFG A I + G
Sbjct: 123 GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------G 173
Query: 495 TVGYIAPEVFC 505
T ++APEV
Sbjct: 174 TPYWMAPEVIL 184
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 322 DIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNV-AVKVLN----DSKGNGEEFINEVASIS 376
D +K+ + + ++G G +G+VY + + S V A+K ++ S ++ I EV +
Sbjct: 51 DPEKLFSDLR-EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAV-- 434
+ H N + G L+ E+ + S +E HK + + AV
Sbjct: 110 KLRHPNTIQYRGCYLREHTAWLVMEYCLGSA--------SDLLEVHKKPLQEVEIAAVTH 161
Query: 435 GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG 494
G +GL YLH S ++H D+K NILL E K+ DFG A I + G
Sbjct: 162 GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------G 212
Query: 495 TVGYIAPEVFC 505
T ++APEV
Sbjct: 213 TPYWMAPEVIL 223
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 86 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 139
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + M G T Y APE+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIML 191
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLT 425
E+ EV+ + H NV+TL LI E V+ G L F+ E LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL------AEKESLT 112
Query: 426 WETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICN 481
E + I G+ YLH S +I HFD+KP NI+L + P KI DFGLA +
Sbjct: 113 EEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 482 RKESIISMTGARGTVGYIAPEV 503
++ GT ++APE+
Sbjct: 170 FGNEFKNIF---GTPEFVAPEI 188
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLT 425
E+ EV+ + H NV+TL LI E V+ G L F+ E LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL------AEKESLT 112
Query: 426 WETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICN 481
E + I G+ YLH S +I HFD+KP NI+L + P KI DFGLA +
Sbjct: 113 EEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 482 RKESIISMTGARGTVGYIAPEV 503
++ GT ++APE+
Sbjct: 170 FGNEFKNIF---GTPEFVAPEI 188
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLT 425
E+ EV+ + H NV+TL LI E V+ G L F+ E LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL------AEKESLT 112
Query: 426 WETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICN 481
E + I G+ YLH S +I HFD+KP NI+L + P KI DFGLA +
Sbjct: 113 EEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 482 RKESIISMTGARGTVGYIAPEV 503
++ GT ++APE+
Sbjct: 170 FGNEFKNIF---GTPEFVAPEI 188
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLT 425
E+ EV+ + H NV+TL LI E V+ G L F+ E LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL------AEKESLT 112
Query: 426 WETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICN 481
E + I G+ YLH S +I HFD+KP NI+L + P KI DFGLA +
Sbjct: 113 EEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 482 RKESIISMTGARGTVGYIAPEV 503
++ GT ++APE+
Sbjct: 170 FGNEFKNIF---GTPEFVAPEI 188
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 13/183 (7%)
Query: 328 NSFKYKLGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGN-GEEFINEVASISRTSHVNVVT 385
N + LG+G YG VY G+ L + +A+K + + + E+A H N+V
Sbjct: 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQ 83
Query: 386 LLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
LG E + E V GSL + +++++ +T+ I GL+YLH
Sbjct: 84 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNE---QTIGFYTKQILEGLKYLH- 139
Query: 446 GCSTRILHFDIKPHNILLDE-DFCPKISDFGLAKICNRKESIISMTGA-RGTVGYIAPEV 503
+I+H DIK N+L++ KISDFG +K R I T GT+ Y+APE+
Sbjct: 140 --DNQIVHRDIKGDNVLINTYSGVLKISDFGTSK---RLAGINPCTETFTGTLQYMAPEI 194
Query: 504 FCR 506
+
Sbjct: 195 IDK 197
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 24/188 (12%)
Query: 333 KLGQGGYGSVYKGKLID-GSNVAVKVLNDSKGN---GEEFINEVASISRTSHVNVVTLLG 388
K+G+G YG V+K + D G VA+K +S+ + + + E+ + + H N+V LL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENH---KLTWETLLQIAVGIARGLEYLHL 445
RR L++E+ + L + + R + H +TW+TL + + + H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHE-LDRYQRGVPEHLVKSITWQTL--------QAVNFCH- 119
Query: 446 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
+H D+KP NIL+ + K+ DFG A++ A T Y +PE+
Sbjct: 120 --KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA--TRWYRSPELL- 174
Query: 506 RNIGEVSY 513
+G+ Y
Sbjct: 175 --VGDTQY 180
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 350 GSNVAVKVLNDSKGNGEE--FINEVASISRTSHVNVVTLLGFCFEGRRRAL--IYEFVSN 405
G VAVK L G + E+ + H +++ G C + +L + E+V
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 406 GSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDE 465
GSL ++ R+S + LL A I G+ YLH + +H D+ N+LLD
Sbjct: 120 GSLRDYLPRHSIGLAQ-------LLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDN 169
Query: 466 DFCPKISDFGLAK 478
D KI DFGLAK
Sbjct: 170 DRLVKIGDFGLAK 182
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 77/178 (43%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYK------GKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLL 387
LG+GG+G V+ GKL + K L KG + + I H + L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK--KILAKVHSRFIVSL 250
Query: 388 GFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
+ FE + L+ ++ G + IY +N + I GLE+LH
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDE--DNPGFQEPRAIFYTAQIVSGLEHLH-- 306
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I++ D+KP N+LLD+D +ISD GLA K G GT G++APE+
Sbjct: 307 -QRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELL 361
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN-------DSKGNGEEFINEVASISRTSHVNVVT 385
LG+G +G V G VA+K++N D +G E E++ + H +++
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER---EISYLRLLRHPHIIK 68
Query: 386 LLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
L ++ E+ N + + R+ S + + ++ ++ +EY H
Sbjct: 69 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIIS-------AVEYCH- 120
Query: 446 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
+I+H D+KP N+LLDE KI+DFGL+ I + + G+ Y APEV
Sbjct: 121 --RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVI 174
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 13/184 (7%)
Query: 328 NSFKYKLGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGN-GEEFINEVASISRTSHVNVVT 385
N + LG+G YG VY G+ L + +A+K + + + E+A H N+V
Sbjct: 10 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQ 69
Query: 386 LLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
LG E + E V GSL + +++++ +T+ I GL+YLH
Sbjct: 70 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNE---QTIGFYTKQILEGLKYLH- 125
Query: 446 GCSTRILHFDIKPHNILLDE-DFCPKISDFGLAKICNRKESIISMTGA-RGTVGYIAPEV 503
+I+H DIK N+L++ KISDFG +K R I T GT+ Y+APE+
Sbjct: 126 --DNQIVHRDIKGDNVLINTYSGVLKISDFGTSK---RLAGINPCTETFTGTLQYMAPEI 180
Query: 504 FCRN 507
+
Sbjct: 181 IDKG 184
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 77/178 (43%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYK------GKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLL 387
LG+GG+G V+ GKL + K L KG + + I H + L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK--KILAKVHSRFIVSL 250
Query: 388 GFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
+ FE + L+ ++ G + IY +N + I GLE+LH
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDE--DNPGFQEPRAIFYTAQIVSGLEHLH-- 306
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I++ D+KP N+LLD+D +ISD GLA K G GT G++APE+
Sbjct: 307 -QRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELL 361
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 26/180 (14%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + +G + E+ S H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + +R L+ EF G L K + ++ E T+ L A L Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL------ADALHYCH---E 132
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVF 504
+++H DIKP N+L+ KI+DFG S+ + + R GT+ Y+ PE+
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGW--------SVHAPSLRRRXMCGTLDYLPPEMI 184
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 77/178 (43%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYK------GKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLL 387
LG+GG+G V+ GKL + K L KG + + I H + L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK--KILAKVHSRFIVSL 250
Query: 388 GFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
+ FE + L+ ++ G + IY +N + I GLE+LH
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDE--DNPGFQEPRAIFYTAQIVSGLEHLH-- 306
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I++ D+KP N+LLD+D +ISD GLA K G GT G++APE+
Sbjct: 307 -QRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELL 361
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 366 EEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLT 425
E+ EV+ + H NV+TL LI E V+ G L F+ E LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL------AEKESLT 112
Query: 426 WETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP----KISDFGLAKICN 481
E + I G+ YLH S +I HFD+KP NI+L + P KI DFGLA +
Sbjct: 113 EEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 482 RKESIISMTGARGTVGYIAPEV 503
++ GT ++APE+
Sbjct: 170 FGNEFKNIF---GTPEFVAPEI 188
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 337 GGYGSVYKGKLIDGSNVAVKVLNDSKGNGE--EFINEVASISRTSHVNVVTLL-GFCFEG 393
G +G VYK + + S +A + D+K E +++ E+ ++ H N+V LL F +E
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 394 RRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILH 453
LI EF + G+++ + + T QI V + L+ L+ +I+H
Sbjct: 81 NLWILI-EFCAGGAVDAVMLELERPL--------TESQIQVVCKQTLDALNYLHDNKIIH 131
Query: 454 FDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEV 503
D+K NIL D K++DFG++ N + I GT ++APEV
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSA-KNTRTXIQRRDSFIGTPYWMAPEV 180
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 26/180 (14%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + +G + E+ S H N++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + +R L+ EF G L K + ++ E T+ L A L Y H
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL------ADALHYCH---E 133
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVF 504
+++H DIKP N+L+ KI+DFG S+ + + R GT+ Y+ PE+
Sbjct: 134 RKVIHRDIKPENLLMGYKGELKIADFGW--------SVHAPSLRRRXMCGTLDYLPPEMI 185
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 26/180 (14%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY + K I V K + +G + E+ S H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + +R L+ EF G L K + ++ E T+ L A L Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL------ADALHYCH---E 132
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEVF 504
+++H DIKP N+L+ KI+DFG S+ + + R GT+ Y+ PE+
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGW--------SVHAPSLRRRXMCGTLDYLPPEMI 184
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 113 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 166
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DFGLA+ + + M G T Y APE+
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGYVATRWYRAPEIML 218
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 29/164 (17%)
Query: 354 AVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSL----- 408
AVKV++ SK + E I + + H N++TL +G+ L+ E + G L
Sbjct: 56 AVKVIDKSKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL 113
Query: 409 -EKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNIL-LDED 466
+KF +S H I + +EYLH S ++H D+KP NIL +DE
Sbjct: 114 RQKFFSEREASFVLHT------------IGKTVEYLH---SQGVVHRDLKPSNILYVDES 158
Query: 467 F---CPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
C +I DFG AK R E+ + MT T ++APEV R
Sbjct: 159 GNPECLRICDFGFAKQL-RAENGLLMTPCY-TANFVAPEVLKRQ 200
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 77/178 (43%), Gaps = 16/178 (8%)
Query: 334 LGQGGYGSVYK------GKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLL 387
LG+GG+G V+ GKL + K L KG + + I H + L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK--KILAKVHSRFIVSL 250
Query: 388 GFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
+ FE + L+ ++ G + IY +N + I GLE+LH
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDE--DNPGFQEPRAIFYTAQIVSGLEHLH-- 306
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I++ D+KP N+LLD+D +ISD GLA K G GT G++APE+
Sbjct: 307 -QRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELL 361
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN-------DSKGNGEEFINEVASISRTSHVNVVT 385
LG+G +G V G VA+K++N D +G E E++ + H +++
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER---EISYLRLLRHPHIIK 78
Query: 386 LLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
L ++ E+ N + + R+ S + + ++ ++ +EY H
Sbjct: 79 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIIS-------AVEYCH- 130
Query: 446 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
+I+H D+KP N+LLDE KI+DFGL+ I + + G+ Y APEV
Sbjct: 131 --RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVI 184
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN-------DSKGNGEEFINEVASISRTSHVNVVT 385
LG+G +G V G VA+K++N D +G E E++ + H +++
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER---EISYLRLLRHPHIIK 77
Query: 386 LLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
L ++ E+ N + + R+ S + + ++ ++ +EY H
Sbjct: 78 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIIS-------AVEYCH- 129
Query: 446 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
+I+H D+KP N+LLDE KI+DFGL+ I + + G+ Y APEV
Sbjct: 130 --RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVI 183
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN-------DSKGNGEEFINEVASISRTSHVNVVT 385
LG+G +G V G VA+K++N D +G E E++ + H +++
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER---EISYLRLLRHPHIIK 72
Query: 386 LLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
L ++ E+ N + + R+ S + + ++ ++ +EY H
Sbjct: 73 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIIS-------AVEYCH- 124
Query: 446 GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
+I+H D+KP N+LLDE KI+DFGL+ I + + G+ Y APEV
Sbjct: 125 --RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVI 178
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 19/184 (10%)
Query: 330 FKYKLGQGGYGSVYKG--------KLIDGSNVAVKVLNDSKGN-GEEFINEVASISRTSH 380
F LGQG + ++KG + + V +KVL+ + N E F + +S+ SH
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 381 VNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
++V G CF G L+ EFV GSL+ ++ +N + I + W+ L++A +A +
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCI---NILWK--LEVAKQLAWAM 126
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTG--ARGTVGY 498
+L ++H ++ NILL + K + K+ + SI + + + +
Sbjct: 127 HFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPW 183
Query: 499 IAPE 502
+ PE
Sbjct: 184 VPPE 187
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 17/181 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
+G+G +G V + D + A+K +N K E+ + H +V L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ + + G L + +N E ET+ + L+YL +
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKE------ETVKLFICELVMALDYLQ---N 133
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
RI+H D+KP NILLDE I+DF +A + R+ I +M GT Y+APE+F
Sbjct: 134 QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA---GTKPYMAPEMFSSRK 190
Query: 509 G 509
G
Sbjct: 191 G 191
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 29/164 (17%)
Query: 354 AVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSL----- 408
AVKV++ SK + E I + + H N++TL +G+ L+ E + G L
Sbjct: 56 AVKVIDKSKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL 113
Query: 409 -EKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNIL-LDED 466
+KF +S H I + +EYLH S ++H D+KP NIL +DE
Sbjct: 114 RQKFFSEREASFVLHT------------IGKTVEYLH---SQGVVHRDLKPSNILYVDES 158
Query: 467 FCP---KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
P +I DFG AK R E+ + MT T ++APEV R
Sbjct: 159 GNPECLRICDFGFAKQL-RAENGLLMTPCY-TANFVAPEVLKRQ 200
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNG---EEFINEVASISRTSHVNVVTLLGF 389
+G+G + V + ++ G VA+K+++ ++ N ++ EV + +H N+V L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ LI E+ S G E F Y + K QI + +Y H
Sbjct: 83 IETEKTLYLIMEYASGG--EVFDYLVAHGRMKEKEARSKFRQIVSAV----QYCH---QK 133
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
RI+H D+K N+LLD D KI+DFG + + + GA Y APE+F
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGA---PPYAAPELF 185
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI DF LA+ + + MTG T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATRWYRAPEIML 195
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 84/188 (44%), Gaps = 38/188 (20%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G YGSV Y +L VAVK L+ S + E+ + H NV+ LL
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 388 GFCFEGRRRALIYEFVSNGSLEKF--IYRNSS--------SIENHKLTWETLLQIAVGIA 437
F S+E F +Y ++ ++ L+ E + + +
Sbjct: 94 DV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL 141
Query: 438 RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVG 497
RGL+Y+H S I+H D+KP N+ ++ED +I DFGLA+ + + MTG T
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRW 193
Query: 498 YIAPEVFC 505
Y APE+
Sbjct: 194 YRAPEIML 201
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 84/188 (44%), Gaps = 38/188 (20%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G YGSV Y +L VAVK L+ S + E+ + H NV+ LL
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 388 GFCFEGRRRALIYEFVSNGSLEKF--IYRNSS--------SIENHKLTWETLLQIAVGIA 437
F S+E F +Y ++ ++ L+ E + + +
Sbjct: 86 DV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL 133
Query: 438 RGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVG 497
RGL+Y+H S I+H D+KP N+ ++ED +I DFGLA+ + + MTG T
Sbjct: 134 RGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE-----MTGYVATRW 185
Query: 498 YIAPEVFC 505
Y APE+
Sbjct: 186 YRAPEIML 193
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 89/185 (48%), Gaps = 21/185 (11%)
Query: 328 NSFK-YK-LGQGGYGSV------YKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTS 379
N+F+ Y+ LG+GG+G V GK+ + K + KG +NE + + +
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA-LNEKQILEKVN 242
Query: 380 HVNVVTLLGFCFEGRRR-ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIAR 438
VV+L + +E + L+ ++ G L+ IY + + A I
Sbjct: 243 SRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQA----GFPEARAVFYAAEICC 297
Query: 439 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 498
GLE LH RI++ D+KP NILLD+ +ISD GLA ++I G GTVGY
Sbjct: 298 GLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI---KGRVGTVGY 351
Query: 499 IAPEV 503
+APEV
Sbjct: 352 MAPEV 356
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 14/133 (10%)
Query: 350 GSNVAVKVLNDSKGNGEE--FINEVASISRTSHVNVVTLLGFCFEGRRRAL--IYEFVSN 405
G VAVK L G + E+ + H +++ G C + ++L + E+V
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 406 GSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDE 465
GSL ++ R+S + LL A I G+ YLH S +H ++ N+LLD
Sbjct: 103 GSLRDYLPRHSIGLAQ-------LLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDN 152
Query: 466 DFCPKISDFGLAK 478
D KI DFGLAK
Sbjct: 153 DRLVKIGDFGLAK 165
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 87/195 (44%), Gaps = 30/195 (15%)
Query: 317 RYSYADIKKMTNSFKYKLGQGGYGSVYKGKLI----DGSNVAVKVLNDS----KGNGEEF 368
+YS D + + LG G +G V+ LI +G A+KVL E
Sbjct: 2 KYSLQDFQILRT-----LGTGSFGRVH---LIRSRHNGRYYAMKVLKKEIVVRLKQVEHT 53
Query: 369 INEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWET 428
+E +S +H ++ + G + ++ +I +++ G L + R S N +
Sbjct: 54 NDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL-RKSQRFPNPVAKF-- 110
Query: 429 LLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS 488
A + LEYLH S I++ D+KP NILLD++ KI+DFG AK +
Sbjct: 111 ---YAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC 164
Query: 489 MTGARGTVGYIAPEV 503
GT YIAPEV
Sbjct: 165 -----GTPDYIAPEV 174
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI D GLA+ + + MTG T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE-----MTGYVATRWYRAPEIML 195
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI FGLA+ + + MTG T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE-----MTGYVATRWYRAPEIML 195
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 21/182 (11%)
Query: 334 LGQGGYGSVYKGKLI-DGSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG+G + VY+ + I G VA+K+++ G + NEV + H +++ L
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ + L+ E NG + +++ +N + + QI G+ YLH S
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYL-KNRVKPFSENEARHFMHQIITGML----YLH---S 130
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA---KICNRKESIISMTGARGTVGYIAPEVFC 505
ILH D+ N+LL + KI+DFGLA K+ + K + GT YI+PE+
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC-----GTPNYISPEIAT 185
Query: 506 RN 507
R+
Sbjct: 186 RS 187
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 334 LGQGGYGSVYKGKL-IDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YG V + + G VA+K + D N + + E+ + H N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 390 CFEGRRRALIY-EFVSNGSLEKFIYRNSSSI--ENHKLTWETLLQIAVGIARGLEYLHLG 446
R + Y EF S + + + I + LT E + + RGL+Y+H
Sbjct: 123 L----RPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH-- 176
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICNRK-ESIISMTGARGTVGYIAPEVF 504
S +++H D+KP N+L++E+ KI DFG+A+ +C E MT T Y APE+
Sbjct: 177 -SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 235
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 25/203 (12%)
Query: 327 TNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTL 386
T + +G+G +G V++GK G VAVK+ + + E A I +T + +
Sbjct: 5 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENI 60
Query: 387 LGFCFEGRRR-------ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
LGF + L+ ++ +GSL ++ R + ++E ++++A+ A G
Sbjct: 61 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG-------MIKLALSTASG 113
Query: 440 LEYLHL---GCSTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR- 493
L +LH+ G + I H D+K NIL+ ++ I+D GLA + I +
Sbjct: 114 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 173
Query: 494 -GTVGYIAPEVFCRNIGEVSYKS 515
GT Y+APEV +I ++S
Sbjct: 174 VGTKRYMAPEVLDDSINMKHFES 196
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 25/203 (12%)
Query: 327 TNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTL 386
T + +G+G +G V++GK G VAVK+ + + E A I +T + +
Sbjct: 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENI 59
Query: 387 LGFCFEGRRR-------ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
LGF + L+ ++ +GSL ++ R + ++E ++++A+ A G
Sbjct: 60 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG-------MIKLALSTASG 112
Query: 440 LEYLHL---GCSTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR- 493
L +LH+ G + I H D+K NIL+ ++ I+D GLA + I +
Sbjct: 113 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 172
Query: 494 -GTVGYIAPEVFCRNIGEVSYKS 515
GT Y+APEV +I ++S
Sbjct: 173 VGTKRYMAPEVLDDSINMKHFES 195
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 30/186 (16%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLNDS----KGNGEEFINEVASISRTSHVNVVTLLG 388
LG+GG+ Y+ +D V A KV+ S E+ E+A + +VV G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHK--LTWETLLQIAVGIARGLEYLHLG 446
F + ++ E SL + R + E +T+ +G++YLH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI--------QGVQYLH-- 159
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-----GTVGYIAP 501
+ R++H D+K N+ L++D KI DFGLA + I G R GT YIAP
Sbjct: 160 -NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKDLCGTPNYIAP 211
Query: 502 EVFCRN 507
EV C+
Sbjct: 212 EVLCKK 217
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI D GLA+ + + MTG T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE-----MTGYVATRWYRAPEIML 195
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 30/186 (16%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLNDS----KGNGEEFINEVASISRTSHVNVVTLLG 388
LG+GG+ Y+ +D V A KV+ S E+ E+A + +VV G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHK--LTWETLLQIAVGIARGLEYLHLG 446
F + ++ E SL + R + E +T+ +G++YLH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI--------QGVQYLH-- 159
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-----GTVGYIAP 501
+ R++H D+K N+ L++D KI DFGLA + I G R GT YIAP
Sbjct: 160 -NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKXLCGTPNYIAP 211
Query: 502 EVFCRN 507
EV C+
Sbjct: 212 EVLCKK 217
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 80/184 (43%), Gaps = 26/184 (14%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLNDS----KGNGEEFINEVASISRTSHVNVVTLLG 388
LG+GG+ Y+ +D V A KV+ S E+ E+A + +VV G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
F + ++ E SL + R + E + +G++YLH +
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYF------MRQTIQGVQYLH---N 144
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-----GTVGYIAPEV 503
R++H D+K N+ L++D KI DFGLA + I G R GT YIAPEV
Sbjct: 145 NRVIHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKDLCGTPNYIAPEV 197
Query: 504 FCRN 507
C+
Sbjct: 198 LCKK 201
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 30/186 (16%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLNDS----KGNGEEFINEVASISRTSHVNVVTLLG 388
LG+GG+ Y+ +D V A KV+ S E+ E+A + +VV G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHK--LTWETLLQIAVGIARGLEYLHLG 446
F + ++ E SL + R + E +T+ +G++YLH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI--------QGVQYLH-- 159
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-----GTVGYIAP 501
+ R++H D+K N+ L++D KI DFGLA + I G R GT YIAP
Sbjct: 160 -NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-------TKIEFDGERKKTLCGTPNYIAP 211
Query: 502 EVFCRN 507
EV C+
Sbjct: 212 EVLCKK 217
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 16/181 (8%)
Query: 334 LGQGGYGSVYKGKL-IDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YG V + + G VA+K + D N + + E+ + H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 390 CFEGRRRALIY-EFVSNGSLEKFIYRNSSSI--ENHKLTWETLLQIAVGIARGLEYLHLG 446
R + Y EF S + + + I + LT E + + RGL+Y+H
Sbjct: 122 L----RPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH-- 175
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICNR-KESIISMTGARGTVGYIAPEVF 504
S +++H D+KP N+L++E+ KI DFG+A+ +C E MT T Y APE+
Sbjct: 176 -SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 234
Query: 505 C 505
Sbjct: 235 L 235
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 313 LAPRRYSY-ADIKKMTNSFKYKLGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEF-I 369
L P Y Y ++ MT+ + +LG+G +G V++ K G AVK K E F +
Sbjct: 60 LKPVDYEYREEVHWMTH--QPRLGRGSFGEVHRMKDKQTGFQCAVK-----KVRLEVFRV 112
Query: 370 NEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETL 429
E+ + + S +V L G EG + E + GSL + I + E+ L +
Sbjct: 113 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY--- 169
Query: 430 LQIAVGIA-RGLEYLHLGCSTRILHFDIKPHNILLDEDFC-PKISDFGLAKICNRKE--- 484
+G A GLEYLH + RILH D+K N+LL D + DFG A +C + +
Sbjct: 170 ----LGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLG 221
Query: 485 -SIISMTGARGTVGYIAPEVF 504
S+++ GT ++APEV
Sbjct: 222 KSLLTGDYIPGTETHMAPEVV 242
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 30/190 (15%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVK-VLNDSKGNGEEFINEVASISRTS--HVNVVTLLGFC 390
LG G G++ + D +VAVK +L + F + + R S H NV+ FC
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRILPECFS----FADREVQLLRESDEHPNVIRY--FC 85
Query: 391 FEGRRRALIYEFVS----NGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
E R+ +++++ +L++++ + L TLLQ GL +LH
Sbjct: 86 TEKDRQ---FQYIAIELCAATLQEYV--EQKDFAHLGLEPITLLQQTTS---GLAHLH-- 135
Query: 447 CSTRILHFDIKPHNILLDE-----DFCPKISDFGL-AKICNRKESIISMTGARGTVGYIA 500
S I+H D+KPHNIL+ ISDFGL K+ + S +G GT G+IA
Sbjct: 136 -SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194
Query: 501 PEVFCRNIGE 510
PE+ + E
Sbjct: 195 PEMLSEDCKE 204
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 333 KLGQGGYGSVYKGKLIDGS----NVAVKVLN----DSKGNGEEFINEVASISRTSHVNVV 384
KLG G +G V +G+ S +VAVK L ++FI EV ++ H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 385 TLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
L G + ++ E GSL + ++ + H L TL + AV +A G+ YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKH----QGHFLL-GTLSRYAVQVAEGMGYLE 128
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT-VGYIAPE 502
S R +H D+ N+LL KI DFGL + + + M R + APE
Sbjct: 129 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 89/185 (48%), Gaps = 21/185 (11%)
Query: 328 NSFK-YK-LGQGGYGSV------YKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTS 379
N+F+ Y+ LG+GG+G V GK+ + K + KG +NE + + +
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA-LNEKQILEKVN 242
Query: 380 HVNVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIAR 438
VV+L + +E + L+ ++ G L+ IY + + A I
Sbjct: 243 SRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQA----GFPEARAVFYAAEICC 297
Query: 439 GLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGY 498
GLE LH RI++ D+KP NILLD+ +ISD GLA ++I G GTVGY
Sbjct: 298 GLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI---KGRVGTVGY 351
Query: 499 IAPEV 503
+APEV
Sbjct: 352 MAPEV 356
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 25/203 (12%)
Query: 327 TNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTL 386
T + +G+G +G V++GK G VAVK+ + + E A I +T + +
Sbjct: 43 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENI 98
Query: 387 LGFCFEGRRR-------ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
LGF + L+ ++ +GSL ++ R + ++E ++++A+ A G
Sbjct: 99 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG-------MIKLALSTASG 151
Query: 440 LEYLHL---GCSTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR- 493
L +LH+ G + I H D+K NIL+ ++ I+D GLA + I +
Sbjct: 152 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 211
Query: 494 -GTVGYIAPEVFCRNIGEVSYKS 515
GT Y+APEV +I ++S
Sbjct: 212 VGTKRYMAPEVLDDSINMKHFES 234
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 25/203 (12%)
Query: 327 TNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTL 386
T + +G+G +G V++GK G VAVK+ + + E A I +T + +
Sbjct: 30 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENI 85
Query: 387 LGFCFEGRRR-------ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
LGF + L+ ++ +GSL ++ R + ++E ++++A+ A G
Sbjct: 86 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG-------MIKLALSTASG 138
Query: 440 LEYLHL---GCSTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR- 493
L +LH+ G + I H D+K NIL+ ++ I+D GLA + I +
Sbjct: 139 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 198
Query: 494 -GTVGYIAPEVFCRNIGEVSYKS 515
GT Y+APEV +I ++S
Sbjct: 199 VGTKRYMAPEVLDDSINMKHFES 221
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 25/203 (12%)
Query: 327 TNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTL 386
T + +G+G +G V++GK G VAVK+ + + E A I +T + +
Sbjct: 7 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENI 62
Query: 387 LGFCFEGRRR-------ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
LGF + L+ ++ +GSL ++ R + ++E ++++A+ A G
Sbjct: 63 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG-------MIKLALSTASG 115
Query: 440 LEYLHL---GCSTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR- 493
L +LH+ G + I H D+K NIL+ ++ I+D GLA + I +
Sbjct: 116 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 175
Query: 494 -GTVGYIAPEVFCRNIGEVSYKS 515
GT Y+APEV +I ++S
Sbjct: 176 VGTKRYMAPEVLDDSINMKHFES 198
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 20/180 (11%)
Query: 333 KLGQGGYGSVYKGKLIDGS----NVAVK-----VLNDSKGNGEEFINEVASISRTSHVNV 383
KLG G +G V +G+ S +VAVK VL+ + ++FI EV ++ H N+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM-DDFIREVNAMHSLDHRNL 77
Query: 384 VTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYL 443
+ L G + ++ E GSL + ++ + H L TL + AV +A G+ YL
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKH----QGHFLL-GTLSRYAVQVAEGMGYL 131
Query: 444 HLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT-VGYIAPE 502
S R +H D+ N+LL KI DFGL + + + M R + APE
Sbjct: 132 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 25/203 (12%)
Query: 327 TNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTL 386
T + +G+G +G V++GK G VAVK+ + + E A I +T + +
Sbjct: 10 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENI 65
Query: 387 LGFCFEGRRR-------ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
LGF + L+ ++ +GSL ++ R + ++E ++++A+ A G
Sbjct: 66 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG-------MIKLALSTASG 118
Query: 440 LEYLHL---GCSTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR- 493
L +LH+ G + I H D+K NIL+ ++ I+D GLA + I +
Sbjct: 119 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 178
Query: 494 -GTVGYIAPEVFCRNIGEVSYKS 515
GT Y+APEV +I ++S
Sbjct: 179 VGTKRYMAPEVLDDSINMKHFES 201
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 20/180 (11%)
Query: 333 KLGQGGYGSVYKGKLIDGS----NVAVK-----VLNDSKGNGEEFINEVASISRTSHVNV 383
KLG G +G V +G+ S +VAVK VL+ + ++FI EV ++ H N+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM-DDFIREVNAMHSLDHRNL 83
Query: 384 VTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYL 443
+ L G + ++ E GSL + ++ + H L TL + AV +A G+ YL
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKH----QGHFLL-GTLSRYAVQVAEGMGYL 137
Query: 444 HLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT-VGYIAPE 502
S R +H D+ N+LL KI DFGL + + + M R + APE
Sbjct: 138 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 333 KLGQGGYGSVYKGKLIDGS----NVAVKVLN----DSKGNGEEFINEVASISRTSHVNVV 384
KLG G +G V +G+ S +VAVK L ++FI EV ++ H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 385 TLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
L G + ++ E GSL + ++ + H L TL + AV +A G+ YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKH----QGHFLL-GTLSRYAVQVAEGMGYLE 128
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT-VGYIAPE 502
S R +H D+ N+LL KI DFGL + + + M R + APE
Sbjct: 129 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G YGSV G VAVK L+ S + + E+ + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKLTWETLLQIAVGIARGLEYLHLGCS 448
R + EF + + + ++I KLT + + + I RGL+Y+H S
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---S 143
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP N+ ++ED KI D GLA+ + + MTG T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE-----MTGYVATRWYRAPEIML 195
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 333 KLGQGGYGSVYKGKLIDGS----NVAVKVLN----DSKGNGEEFINEVASISRTSHVNVV 384
KLG G +G V +G+ S +VAVK L ++FI EV ++ H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 385 TLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
L G + ++ E GSL + ++ + H L TL + AV +A G+ YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKH----QGHFLL-GTLSRYAVQVAEGMGYLE 128
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT-VGYIAPE 502
S R +H D+ N+LL KI DFGL + + + M R + APE
Sbjct: 129 ---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 20/180 (11%)
Query: 333 KLGQGGYGSVYKGKLIDGS----NVAVK-----VLNDSKGNGEEFINEVASISRTSHVNV 383
KLG G +G V +G+ S +VAVK VL+ + ++FI EV ++ H N+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM-DDFIREVNAMHSLDHRNL 83
Query: 384 VTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYL 443
+ L G + ++ E GSL + ++ + H L TL + AV +A G+ YL
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKH----QGHFLL-GTLSRYAVQVAEGMGYL 137
Query: 444 HLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT-VGYIAPE 502
S R +H D+ N+LL KI DFGL + + + M R + APE
Sbjct: 138 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 20/180 (11%)
Query: 333 KLGQGGYGSVYKGKLIDGS----NVAVK-----VLNDSKGNGEEFINEVASISRTSHVNV 383
KLG G +G V +G+ S +VAVK VL+ + ++FI EV ++ H N+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM-DDFIREVNAMHSLDHRNL 77
Query: 384 VTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYL 443
+ L G + ++ E GSL + ++ + H L TL + AV +A G+ YL
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKH----QGHFLL-GTLSRYAVQVAEGMGYL 131
Query: 444 HLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT-VGYIAPE 502
S R +H D+ N+LL KI DFGL + + + M R + APE
Sbjct: 132 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 15/176 (8%)
Query: 333 KLGQGGYGSVYKGKLI---DGSNVAVKVLNDSKGNGEE--FINEVASISRTSHVN-VVTL 386
++G+G YGSV K++ G +AVK + + E+ + ++ + R+S +V
Sbjct: 29 EIGRGAYGSV--NKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 387 LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
G F + E +S S +KF Y+ S+ + + E L +I + + L HL
Sbjct: 87 YGALFREGDCWICMELMST-SFDKF-YKYVYSVLDDVIPEEILGKITLATVKALN--HLK 142
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
+ +I+H DIKP NILLD K+ DFG I + I+ T G Y+APE
Sbjct: 143 ENLKIIHRDIKPSNILLDRSGNIKLCDFG---ISGQLVDSIAKTRDAGCRPYMAPE 195
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 14/133 (10%)
Query: 350 GSNVAVKVLNDSKGNGEE--FINEVASISRTSHVNVVTLLGFCFEGRRRAL--IYEFVSN 405
G VAVK L G + E+ + H +++ G C + ++L + E+V
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 406 GSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDE 465
GSL ++ R+S + LL A I G+ YLH + +H ++ N+LLD
Sbjct: 103 GSLRDYLPRHSIGLAQ-------LLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDN 152
Query: 466 DFCPKISDFGLAK 478
D KI DFGLAK
Sbjct: 153 DRLVKIGDFGLAK 165
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 19/180 (10%)
Query: 333 KLGQGGYGSVYKGKLIDGSN---VAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLL 387
++G+G +G V+KG ID VA+K+++ +++ E+ E+ +S+ V
Sbjct: 30 RIGKGSFGEVFKG--IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G +G + +I E++ GS + + + ++ T+L+ I +GL+YLH
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLL--RAGPFDEFQIA--TMLK---EILKGLDYLH--- 137
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
S + +H DIK N+LL E K++DFG+A ++ I GT ++APEV ++
Sbjct: 138 SEKKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQS 195
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 23/195 (11%)
Query: 320 YADIKKMTNSFKYKLGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNGEEFI-NEVASISR 377
+ D+ K+T+ LG+G Y V L +G AVK++ G+ + EV ++ +
Sbjct: 10 FEDMYKLTSEL---LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQ 66
Query: 378 -TSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGI 436
+ N++ L+ F + R L++E + GS+ I + E ++ +
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREAS------RVVRDV 120
Query: 437 ARGLEYLHLGCSTRILHFDIKPHNILLD--EDFCP-KISDFGLA---KICNRKESIIS-- 488
A L++LH + I H D+KP NIL + E P KI DF L K+ N I +
Sbjct: 121 AAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPE 177
Query: 489 MTGARGTVGYIAPEV 503
+T G+ Y+APEV
Sbjct: 178 LTTPCGSAEYMAPEV 192
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 22/194 (11%)
Query: 318 YSYADIKKMTNSFKYKLGQGGYGSVYK-GKLIDGSNVAVKVLNDSKGNGEEFI-NEVASI 375
Y Y DI + +LG G +G V++ + G K +N + + NE++ +
Sbjct: 50 YDYYDILE-------ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIM 102
Query: 376 SRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG 435
++ H ++ L + LI EF+S G L I + E++K++ ++
Sbjct: 103 NQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI-----AAEDYKMSEAEVINYMRQ 157
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP--KISDFGLAKICNRKESIISMTGAR 493
GL+++H I+H DIKP NI+ + KI DFGLA N E I+ +T A
Sbjct: 158 ACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-IVKVTTA- 212
Query: 494 GTVGYIAPEVFCRN 507
T + APE+ R
Sbjct: 213 -TAEFAAPEIVDRE 225
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNG---EEFINEVASISRTSHVNVVTLLGF 389
+G+G + V + ++ G VA+K+++ ++ N ++ EV + +H N+V L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ LI E+ S G E F Y + K QI + +Y H
Sbjct: 80 IETEKTLYLIMEYASGG--EVFDYLVAHGRMKEKEARSKFRQIVSAV----QYCH---QK 130
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
RI+H D+K N+LLD D KI+DFG + + + G+ Y APE+F
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC---GSPPYAAPELF 182
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 19/180 (10%)
Query: 333 KLGQGGYGSVYKGKLIDGSN---VAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLL 387
++G+G +G VYKG ID VA+K+++ +++ E+ E+ +S+ +
Sbjct: 26 RIGKGSFGEVYKG--IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G + + +I E++ GS + +E + T+L+ I +GL+YLH
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIA--TILR---EILKGLDYLH--- 133
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
S R +H DIK N+LL E K++DFG+A ++ I GT ++APEV ++
Sbjct: 134 SERKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQS 191
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 19/180 (10%)
Query: 333 KLGQGGYGSVYKGKLIDGSN---VAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLL 387
K+G+G +G V+KG ID VA+K+++ +++ E+ E+ +S+ V
Sbjct: 29 KIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G + + +I E++ GS + E L + I I +GL+YLH
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATILREILKGLDYLH--- 136
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
S + +H DIK N+LL E K++DFG+A ++ I GT ++APEV ++
Sbjct: 137 SEKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQS 194
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDN--VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 142
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 508 IG 509
G
Sbjct: 203 KG 204
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 84/182 (46%), Gaps = 26/182 (14%)
Query: 334 LGQGGYGSVY--KGKLIDGSNVAVKVLND----SKGNGEEFINEVASISRTSHVNVVTLL 387
LG+G +G V K K I G AVKV++ K + E + EV + + H N+ L
Sbjct: 34 LGKGSFGEVILCKDK-ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 388 GFCFEGRRRALIYEFVSNGSL-EKFIYRNS-SSIENHKLTWETLLQIAVGIARGLEYLHL 445
F + L+ E + G L ++ I R S ++ ++ + L G+ Y H
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL--------SGITYXH- 143
Query: 446 GCSTRILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
+I+H D+KP N+LL+ +D +I DFGL+ E+ GT YIAPE
Sbjct: 144 --KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKXKDKIGTAYYIAPE 198
Query: 503 VF 504
V
Sbjct: 199 VL 200
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 352 NVAVKVLNDSK--GNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLE 409
VA+K +N K + +E + E+ ++S+ H N+V+ L+ + +S GS+
Sbjct: 42 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 101
Query: 410 KFIYRNSSSIENHK---LTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDED 466
I + E HK L T+ I + GLEYLH +H D+K NILL ED
Sbjct: 102 DIIKHIVAKGE-HKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGED 157
Query: 467 FCPKISDFGLAKICNRKESIISMTGARGTVG---YIAPEVFCRNIGEVSYKSD 516
+I+DFG++ I + VG ++APEV + G +K+D
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKAD 209
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 19/194 (9%)
Query: 333 KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE 392
++G+G YG V+ GK G VAVKV ++ E+ H N++ + +
Sbjct: 44 QIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 393 GR----RRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC- 447
G + LI ++ NGSL + Y S++++ +++L++A GL +LH
Sbjct: 103 GTGSWTQLYLITDYHENGSL--YDYLKSTTLDA-----KSMLKLAYSSVSGLCHLHTEIF 155
Query: 448 STR----ILHFDIKPHNILLDEDFCPKISDFGLAK--ICNRKESIISMTGARGTVGYIAP 501
ST+ I H D+K NIL+ ++ I+D GLA I + E I GT Y+ P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 502 EVFCRNIGEVSYKS 515
EV ++ ++S
Sbjct: 216 EVLDESLNRNHFQS 229
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLNDS---KGNGEEFINEVASISRT-SHVNVVTLLG 388
LG+GG+ ++ D V A K++ S K + E ++ SI R+ +H +VV G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
F + ++ E SL + R + E + L QI +G +YLH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY--LRQIVLGC----QYLH---R 135
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-----GTVGYIAPEV 503
R++H D+K N+ L+ED KI DFGLA + + G R GT YIAPEV
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKTLCGTPNYIAPEV 188
Query: 504 FCRN 507
+
Sbjct: 189 LSKK 192
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 16/175 (9%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNG---EEFINEVASISRTSHVNVVTLLGF 389
+G+G + V + ++ G VAVK+++ ++ N ++ EV + +H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ L+ E+ S G E F Y + K QI + +Y H
Sbjct: 82 IETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAV----QYCH---QK 132
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+K N+LLD D KI+DFG + + + GA Y APE+F
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGA---PPYAAPELF 184
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLNDS---KGNGEEFINEVASISRT-SHVNVVTLLG 388
LG+GG+ ++ D V A K++ S K + E ++ SI R+ +H +VV G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
F + ++ E SL + R + E + L QI +G +YLH
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY--LRQIVLGC----QYLH---R 157
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-----GTVGYIAPEV 503
R++H D+K N+ L+ED KI DFGLA + + G R GT YIAPEV
Sbjct: 158 NRVIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKVLCGTPNYIAPEV 210
Query: 504 FCRN 507
+
Sbjct: 211 LSKK 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLNDS---KGNGEEFINEVASISRT-SHVNVVTLLG 388
LG+GG+ ++ D V A K++ S K + E ++ SI R+ +H +VV G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
F + ++ E SL + R + E + L QI +G +YLH
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY--LRQIVLGC----QYLH---R 139
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-----GTVGYIAPEV 503
R++H D+K N+ L+ED KI DFGLA + + G R GT YIAPEV
Sbjct: 140 NRVIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKTLCGTPNYIAPEV 192
Query: 504 FCRN 507
+
Sbjct: 193 LSKK 196
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 19/180 (10%)
Query: 333 KLGQGGYGSVYKGKLIDGSN---VAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLL 387
K+G+G +G V+KG ID VA+K+++ +++ E+ E+ +S+ V
Sbjct: 14 KIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G + + +I E++ GS + E L + I I +GL+YLH
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATILREILKGLDYLH--- 121
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
S + +H DIK N+LL E K++DFG+A ++ I GT ++APEV ++
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQS 179
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDN--LNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIND 92
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 146
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 508 IG 509
G
Sbjct: 207 KG 208
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 352 NVAVKVLNDSK--GNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLE 409
VA+K +N K + +E + E+ ++S+ H N+V+ L+ + +S GS+
Sbjct: 37 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 96
Query: 410 KFIYRNSSSIENHK---LTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDED 466
I + E HK L T+ I + GLEYLH +H D+K NILL ED
Sbjct: 97 DIIKHIVAKGE-HKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGED 152
Query: 467 FCPKISDFGLAKICNRKESIISMTGARGTVG---YIAPEVF 504
+I+DFG++ I + VG ++APEV
Sbjct: 153 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 193
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 313 LAPRRYSY-ADIKKMTNSFKYKLGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEF-I 369
L P Y Y ++ MT+ + ++G+G +G V++ K G AVK K E F +
Sbjct: 62 LKPVDYEYREEVHWMTH--QPRVGRGSFGEVHRMKDKQTGFQCAVK-----KVRLEVFRV 114
Query: 370 NEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETL 429
E+ + + S +V L G EG + E + GSL + I + E+ L +
Sbjct: 115 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY--- 171
Query: 430 LQIAVGIA-RGLEYLHLGCSTRILHFDIKPHNILLDEDFC-PKISDFGLAKICNRKE--- 484
+G A GLEYLH + RILH D+K N+LL D + DFG A +C + +
Sbjct: 172 ----LGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLG 223
Query: 485 -SIISMTGARGTVGYIAPEVF 504
S+++ GT ++APEV
Sbjct: 224 KSLLTGDYIPGTETHMAPEVV 244
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLNDS---KGNGEEFINEVASISRT-SHVNVVTLLG 388
LG+GG+ ++ D V A K++ S K + E ++ SI R+ +H +VV G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
F + ++ E SL + R + E + L QI +G +YLH
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY--LRQIVLGC----QYLH---R 159
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-----GTVGYIAPEV 503
R++H D+K N+ L+ED KI DFGLA + + G R GT YIAPEV
Sbjct: 160 NRVIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKVLCGTPNYIAPEV 212
Query: 504 FCRN 507
+
Sbjct: 213 LSKK 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 19/186 (10%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFEG 393
+G+G YG V++G G NVAVK+ + E+ + H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 394 RRRA----LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL---G 446
R + LI + GSL ++ + L + L+I + IA GL +LH+ G
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYLQLTT-------LDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 447 CSTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTG--ARGTVGYIAPE 502
+ I H D+K NIL+ ++ I+D GLA + ++ + + + GT Y+APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 503 VFCRNI 508
V I
Sbjct: 188 VLDETI 193
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 19/180 (10%)
Query: 333 KLGQGGYGSVYKGKLIDGSN---VAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLL 387
K+G+G +G V+KG ID VA+K+++ +++ E+ E+ +S+ V
Sbjct: 14 KIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G + + +I E++ GS + E L + I I +GL+YLH
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATILREILKGLDYLH--- 121
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
S + +H DIK N+LL E K++DFG+A ++ I GT ++APEV ++
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQS 179
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 23/199 (11%)
Query: 313 LAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFINE 371
L P Y Y + + + + +LG+G +G V++ + G AVK + EE +
Sbjct: 81 LKPVDYEYRE-EVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELM-- 137
Query: 372 VASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQ 431
+ + + +V L G EG + E + GSL + + E+ L +
Sbjct: 138 --ACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYY----- 190
Query: 432 IAVGIA-RGLEYLHLGCSTRILHFDIKPHNILLDEDFC-PKISDFGLAKICNRKE----S 485
+G A GLEYLH S RILH D+K N+LL D + DFG A +C + + S
Sbjct: 191 --LGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLGKS 244
Query: 486 IISMTGARGTVGYIAPEVF 504
+++ GT ++APEV
Sbjct: 245 LLTGDYIPGTETHMAPEVV 263
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLNDS---KGNGEEFINEVASISRT-SHVNVVTLLG 388
LG+GG+ ++ D V A K++ S K + E ++ SI R+ +H +VV G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
F + ++ E SL + R + E + L QI +G +YLH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY--LRQIVLGC----QYLH---R 135
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-----GTVGYIAPEV 503
R++H D+K N+ L+ED KI DFGLA + + G R GT YIAPEV
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKTLCGTPNYIAPEV 188
Query: 504 FCRN 507
+
Sbjct: 189 LSKK 192
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 313 LAPRRYSY-ADIKKMTNSFKYKLGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEF-I 369
L P Y Y ++ MT+ + ++G+G +G V++ K G AVK K E F +
Sbjct: 46 LKPVDYEYREEVHWMTH--QPRVGRGSFGEVHRMKDKQTGFQCAVK-----KVRLEVFRV 98
Query: 370 NEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETL 429
E+ + + S +V L G EG + E + GSL + I + E+ L +
Sbjct: 99 EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY--- 155
Query: 430 LQIAVGIA-RGLEYLHLGCSTRILHFDIKPHNILLDEDFC-PKISDFGLAKICNRKE--- 484
+G A GLEYLH + RILH D+K N+LL D + DFG A +C + +
Sbjct: 156 ----LGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLG 207
Query: 485 -SIISMTGARGTVGYIAPEVF 504
S+++ GT ++APEV
Sbjct: 208 KSLLTGDYIPGTETHMAPEVV 228
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 33/164 (20%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+GQG +G V+K + G VA+K + N+ +G + E+ + H NVV L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 389 FCFEGRRRA-----------LIYEFVSN---GSLEKFIYRNSSSIENHKLTWETLLQIAV 434
C R +A L+++F + G L + K T + ++
Sbjct: 85 IC---RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---------KFTLSEIKRVMQ 132
Query: 435 GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK 478
+ GL Y+H +ILH D+K N+L+ D K++DFGLA+
Sbjct: 133 MLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 19/180 (10%)
Query: 333 KLGQGGYGSVYKGKLIDGSN---VAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLL 387
K+G+G +G V+KG ID VA+K+++ +++ E+ E+ +S+ V
Sbjct: 34 KIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
G + + +I E++ GS + E L + I I +GL+YLH
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATILREILKGLDYLH--- 141
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
S + +H DIK N+LL E K++DFG+A ++ I GT ++APEV ++
Sbjct: 142 SEKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQS 199
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDN--VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 142
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 508 IG 509
G
Sbjct: 203 KG 204
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 330 FKYKLGQGGYGSVYKG--------KLIDGSNVAVKVLNDSKGN-GEEFINEVASISRTSH 380
F LGQG + ++KG + + V +KVL+ + N E F + +S+ SH
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 381 VNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
++V G C G L+ EFV GSL+ ++ +N + I + W+ L++A +A +
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCI---NILWK--LEVAKQLAAAM 126
Query: 441 EYLHLGCSTRILHFDIKPHNILL 463
+L ++H ++ NILL
Sbjct: 127 HFLE---ENTLIHGNVCAKNILL 146
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 24/179 (13%)
Query: 334 LGQGGYGSVY-----KGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G+VY K I V K + +G + E+ + H N++ L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ RR LI E+ G L K + ++ + E T I +A L Y H
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTAT------IMEELADALMYCH---G 141
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGL---AKICNRKESIISMTGARGTVGYIAPEVF 504
+++H DIKP N+LL KI+DFG A RK GT+ Y+ PE+
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC-------GTLDYLPPEMI 193
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 19/186 (10%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFEG 393
+G+G YG V++G G NVAVK+ + E+ + H N++ +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 103
Query: 394 RRRA----LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL---G 446
R + LI + GSL ++ + L + L+I + IA GL +LH+ G
Sbjct: 104 RHSSTQLWLITHYHEMGSLYDYLQLTT-------LDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 447 CSTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTG--ARGTVGYIAPE 502
+ I H D+K NIL+ ++ I+D GLA + ++ + + + GT Y+APE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 216
Query: 503 VFCRNI 508
V I
Sbjct: 217 VLDETI 222
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 19/186 (10%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFEG 393
+G+G YG V++G G NVAVK+ + E+ + H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 394 RRRA----LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL---G 446
R + LI + GSL ++ + L + L+I + IA GL +LH+ G
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYLQLTT-------LDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 447 CSTR--ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTG--ARGTVGYIAPE 502
+ I H D+K NIL+ ++ I+D GLA + ++ + + + GT Y+APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 503 VFCRNI 508
V I
Sbjct: 188 VLDETI 193
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 350 GSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFCFEGRRRA--LIYEFVSN 405
G VAVK L + G + E+ + H ++V G C + ++ L+ E+V
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 406 GSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDE 465
GSL ++ R+ + LL A I G+ YLH + +H + N+LLD
Sbjct: 97 GSLRDYLPRHCVGLAQ-------LLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDN 146
Query: 466 DFCPKISDFGLAK 478
D KI DFGLAK
Sbjct: 147 DRLVKIGDFGLAK 159
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 350 GSNVAVKVLNDSKGNG--EEFINEVASISRTSHVNVVTLLGFCFEGRRRA--LIYEFVSN 405
G VAVK L + G + E+ + H ++V G C + ++ L+ E+V
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 406 GSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDE 465
GSL ++ R+ + LL A I G+ YLH + +H + N+LLD
Sbjct: 98 GSLRDYLPRHCVGLAQ-------LLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDN 147
Query: 466 DFCPKISDFGLAK 478
D KI DFGLAK
Sbjct: 148 DRLVKIGDFGLAK 160
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLNDS---KGNGEEFINEVASISRT-SHVNVVTLLG 388
LG+GG+ ++ D V A K++ S K + E ++ SI R+ +H +VV G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
F + ++ E SL + R + E + L QI +G +YLH
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYY--LRQIVLGC----QYLH---R 133
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR-----GTVGYIAPEV 503
R++H D+K N+ L+ED KI DFGLA + + G R GT YIAPEV
Sbjct: 134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLA-------TKVEYDGERKKVLCGTPNYIAPEV 186
Query: 504 FCRN 507
+
Sbjct: 187 LSKK 190
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 80/181 (44%), Gaps = 27/181 (14%)
Query: 333 KLGQGGYGSVYKGKLIDGSN-VAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCF 391
+LG+G VY+ K A+KVL + + + E+ + R SH N++ L
Sbjct: 60 ELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFE 118
Query: 392 EGRRRALIYEFVSNGSL-----EKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLG 446
+L+ E V+ G L EK Y + + K QI +A YLH
Sbjct: 119 TPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK-------QILEAVA----YLH-- 165
Query: 447 CSTRILHFDIKPHNILLDE---DFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEV 503
I+H D+KP N+L D KI+DFGL+KI + + M GT GY APE+
Sbjct: 166 -ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ---VLMKTVCGTPGYCAPEI 221
Query: 504 F 504
Sbjct: 222 L 222
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDN--VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 142
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 508 IG 509
G
Sbjct: 203 KG 204
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 332 YKLGQGGYGSVYK-GKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
Y +G G YG K + DG + K L+ ++ + ++EV + H N+V
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 388 GFCFEGRRRAL--IYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
+ L + E+ G L I + + E L E +L++ + L+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTK--ERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 446 ---GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
G T +LH D+KP N+ LD K+ DFGLA+I N E GT Y++PE
Sbjct: 130 RSDGGHT-VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK--EFVGTPYYMSPE 186
Query: 503 VFCR 506
R
Sbjct: 187 QMNR 190
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 87/183 (47%), Gaps = 20/183 (10%)
Query: 331 KYKLGQGGYGSVYKGKLIDGSNV--AVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K +G G Y SV K + +N+ AVK+++ SK + E I + + H N++TL
Sbjct: 27 KEDIGVGSY-SVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEIL--LRYGQHPNIITLKD 83
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+G+ ++ E + G L I R E + I + +EYLH +
Sbjct: 84 VYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASA------VLFTITKTVEYLH---A 134
Query: 449 TRILHFDIKPHNIL-LDEDFCP---KISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
++H D+KP NIL +DE P +I DFG AK R E+ + MT T ++APEV
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLMTPCY-TANFVAPEVL 192
Query: 505 CRN 507
R
Sbjct: 193 ERQ 195
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 332 YKLGQGGYGSVYK-GKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
Y +G G YG K + DG + K L+ ++ + ++EV + H N+V
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 388 GFCFEGRRRAL--IYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
+ L + E+ G L I + + E L E +L++ + L+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTK--ERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 446 ---GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
G T +LH D+KP N+ LD K+ DFGLA+I N S GT Y++PE
Sbjct: 130 RSDGGHT-VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK--AFVGTPYYMSPE 186
Query: 503 VFCR 506
R
Sbjct: 187 QMNR 190
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 33/164 (20%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+GQG +G V+K + G VA+K + N+ +G + E+ + H NVV L+
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 389 FCFEGRRRA-----------LIYEFVSN---GSLEKFIYRNSSSIENHKLTWETLLQIAV 434
C R +A L+++F + G L + K T + ++
Sbjct: 84 IC---RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---------KFTLSEIKRVMQ 131
Query: 435 GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK 478
+ GL Y+H +ILH D+K N+L+ D K++DFGLA+
Sbjct: 132 MLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDN--LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 146
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 508 IG 509
G
Sbjct: 207 KG 208
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 23/199 (11%)
Query: 313 LAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFINE 371
L P Y Y + + + + +LG+G +G V++ + G AVK + EE +
Sbjct: 62 LKPVDYEYRE-EVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELM-- 118
Query: 372 VASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQ 431
+ + + +V L G EG + E + GSL + + E+ L +
Sbjct: 119 --ACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYY----- 171
Query: 432 IAVGIA-RGLEYLHLGCSTRILHFDIKPHNILLDEDFC-PKISDFGLAKICNRKESIIS- 488
+G A GLEYLH S RILH D+K N+LL D + DFG A +C + + +
Sbjct: 172 --LGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLGKD 225
Query: 489 -MTG--ARGTVGYIAPEVF 504
+TG GT ++APEV
Sbjct: 226 LLTGDYIPGTETHMAPEVV 244
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDN--VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 142
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 508 IG 509
G
Sbjct: 203 KG 204
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 33/164 (20%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+GQG +G V+K + G VA+K + N+ +G + E+ + H NVV L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 389 FCFEGRRRA-----------LIYEFVSN---GSLEKFIYRNSSSIENHKLTWETLLQIAV 434
C R +A L+++F + G L + K T + ++
Sbjct: 85 IC---RTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV---------KFTLSEIKRVMQ 132
Query: 435 GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK 478
+ GL Y+H +ILH D+K N+L+ D K++DFGLA+
Sbjct: 133 MLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 331 KYKLGQGGYGSVYK-GKLIDGSNVAVKVLNDSKGNGEEF--INEVASISRT-SHVNVVTL 386
K +LG+G + V + G A K++N K + +F + A I R H N+V L
Sbjct: 10 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 69
Query: 387 LGFCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
E L+++ V+ G L E + R S + + +L+ + Y H
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-------SIAYCH- 121
Query: 446 GCSTRILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
S I+H ++KP N+LL + K++DFGLA N E+ G GT GY++PE
Sbjct: 122 --SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPE 176
Query: 503 VFCRN 507
V ++
Sbjct: 177 VLKKD 181
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNG---EEFINEVASISRTSHVNVVTLLGF 389
+G+G + V + ++ G VAVK+++ ++ N ++ EV + +H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ L+ E+ S G E F Y + K QI + +Y H
Sbjct: 82 IETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAV----QYCH---QK 132
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLA---KICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+K N+LLD D KI+DFG + N+ ++ G+ Y APE+F
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC------GSPPYAAPELF 184
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 33/164 (20%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVL---NDSKGNGEEFINEVASISRTSHVNVVTLLG 388
K+GQG +G V+K + G VA+K + N+ +G + E+ + H NVV L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 389 FCFEGRRRA-----------LIYEFVSN---GSLEKFIYRNSSSIENHKLTWETLLQIAV 434
C R +A L+++F + G L + K T + ++
Sbjct: 85 IC---RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---------KFTLSEIKRVMQ 132
Query: 435 GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK 478
+ GL Y+H +ILH D+K N+L+ D K++DFGLA+
Sbjct: 133 MLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 33 IGEGAYGMVCSAYDN--VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 144
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 508 IG 509
G
Sbjct: 205 KG 206
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 332 YKLGQGGYGSVYK-GKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
Y +G G YG K + DG + K L+ ++ + ++EV + H N+V
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 388 GFCFEGRRRAL--IYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
+ L + E+ G L I + + E L E +L++ + L+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTK--ERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 446 ---GCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
G T +LH D+KP N+ LD K+ DFGLA+I N S GT Y++PE
Sbjct: 130 RSDGGHT-VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPE 186
Query: 503 VFCR 506
R
Sbjct: 187 QMNR 190
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 331 KYKLGQGGYGSVYK-GKLIDGSNVAVKVLNDSKGNGEEF--INEVASISRT-SHVNVVTL 386
K +LG+G + V + G A K++N K + +F + A I R H N+V L
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 387 LGFCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
E L+++ V+ G L E + R S + + +L+ + Y H
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-------SIAYCH- 122
Query: 446 GCSTRILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
S I+H ++KP N+LL + K++DFGLA N E+ G GT GY++PE
Sbjct: 123 --SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPE 177
Query: 503 VFCRN 507
V ++
Sbjct: 178 VLKKD 182
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNG---EEFINEVASISRTSHVNVVTLLGF 389
+G+G + V + ++ G VAVK+++ ++ N ++ EV + +H N+V L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ L+ E+ S G E F Y + K QI + +Y H
Sbjct: 75 IETEKTLYLVMEYASGG--EVFDYLVAHGWMKEKEARAKFRQIVSAV----QYCH---QK 125
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLA---KICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+K N+LLD D KI+DFG + N+ ++ G+ Y APE+F
Sbjct: 126 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC------GSPPYAAPELF 177
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 331 KYKLGQGGYGSVYK-GKLIDGSNVAVKVLNDSKGNGEEF--INEVASISRT-SHVNVVTL 386
K +LG+G + V + G A K++N K + +F + A I R H N+V L
Sbjct: 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 387 LGFCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHL 445
E L+++ V+ G L E + R S + + +L+ + Y H
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-------SIAYCH- 122
Query: 446 GCSTRILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPE 502
S I+H ++KP N+LL + K++DFGLA N E+ G GT GY++PE
Sbjct: 123 --SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPE 177
Query: 503 VFCRN 507
V ++
Sbjct: 178 VLKKD 182
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNG---EEFINEVASISRTSHVNVVTLLGF 389
+G+G + V + ++ G VAVK+++ ++ N ++ EV + +H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ L+ E+ S G E F Y + K QI + +Y H
Sbjct: 82 IETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAV----QYCH---QK 132
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLA---KICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+K N+LLD D KI+DFG + N+ ++ G+ Y APE+F
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC------GSPPYAAPELF 184
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 39 IGEGAYGMVCSAYDN--VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 150
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 151 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 210
Query: 508 IG 509
G
Sbjct: 211 KG 212
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDN--VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 142
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 508 IG 509
G
Sbjct: 203 KG 204
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 51 IGEGAYGMVCSAYDN--VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 162
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 163 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 508 IG 509
G
Sbjct: 223 KG 224
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 25/187 (13%)
Query: 331 KYKLGQGGYGSVYK-GKLIDGSNVAVKVLNDSKGNGEEF--INEVASISRT-SHVNVVTL 386
K +LG+G + V + G A K++N K + +F + A I R H N+V L
Sbjct: 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 93
Query: 387 LGFCFEGRRRALIYEFVSNGSL-EKFIYRN--SSSIENHKLTWETLLQIAVGIARGLEYL 443
E L+++ V+ G L E + R S + +H + QI IA Y
Sbjct: 94 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH-----CIQQILESIA----YC 144
Query: 444 HLGCSTRILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 500
H S I+H ++KP N+LL + K++DFGLA N E+ G GT GY++
Sbjct: 145 H---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLS 198
Query: 501 PEVFCRN 507
PEV ++
Sbjct: 199 PEVLKKD 205
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 36 IGEGAYGMVCSAYDN--LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 147
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 207
Query: 508 IG 509
G
Sbjct: 208 KG 209
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 37 IGEGAYGMVCSAYDN--LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 94
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 95 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 148
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 149 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 208
Query: 508 IG 509
G
Sbjct: 209 KG 210
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 28 IGEGAYGMVCSAYDN--LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 85
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 86 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 139
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 140 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 199
Query: 508 IG 509
G
Sbjct: 200 KG 201
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNG---EEFINEVASISRTSHVNVVTLLGF 389
+G+G + V + ++ G VAVK+++ ++ N ++ EV + +H N+V L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ L+ E+ S G E F Y + K QI + +Y H
Sbjct: 83 IETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAV----QYCH---QK 133
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAK---ICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+K N+LLD D KI+DFG + + N+ ++ G+ Y APE+F
Sbjct: 134 YIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC------GSPPYAAPELF 185
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDN--LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 146
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 508 IG 509
G
Sbjct: 207 KG 208
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 85/206 (41%), Gaps = 29/206 (14%)
Query: 314 APRRYSYADIKKMTNSFKYK----LGQGGYG--SVYKGKLIDGSNVAVKVLNDSKGNGEE 367
AP D+ M +S +Y +G G +G + + KL VAVK + E
Sbjct: 4 APVTTGPLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLT-KELVAVKYIERGAAIDEN 62
Query: 368 FINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTW 426
E+ + H N+V A+I E+ S G L E+ S + + +
Sbjct: 63 VQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFF 122
Query: 427 ETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP--KISDFGLAKICNRKE 484
+ LL G+ Y H S +I H D+K N LLD P KI DFG +K
Sbjct: 123 QQLLS-------GVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSK------ 166
Query: 485 SIISMTGARGTVG---YIAPEVFCRN 507
S + + + TVG YIAPEV R
Sbjct: 167 SSVLHSQPKSTVGTPAYIAPEVLLRQ 192
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 29 IGEGAYGMVCSAYDN--LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 140
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 508 IG 509
G
Sbjct: 201 KG 202
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 29 IGEGAYGMVCSAYDN--LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 140
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 508 IG 509
G
Sbjct: 201 KG 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 86/197 (43%), Gaps = 26/197 (13%)
Query: 322 DIKKMTNSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLND----SKGNGEEFINEVAS 374
D K N F Y LG+G +G V + G A+K+L +K + E
Sbjct: 4 DPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 63
Query: 375 ISRTSHVNVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIA 433
+ T H +T L + F+ R + E+ + G L F + + + T E
Sbjct: 64 LQNTRH-PFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERV----FTEERARFYG 116
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI---ISMT 490
I LEYLH S +++ DIK N++LD+D KI+DFGL KE I +M
Sbjct: 117 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC-----KEGISDGATMK 168
Query: 491 GARGTVGYIAPEVFCRN 507
GT Y+APEV N
Sbjct: 169 XFCGTPEYLAPEVLEDN 185
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 16/175 (9%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNG---EEFINEVASISRTSHVNVVTLLGF 389
+G+G + V + ++ G VAVK+++ ++ N ++ EV +H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ L+ E+ S G E F Y + K QI + +Y H
Sbjct: 82 IETEKTLYLVXEYASGG--EVFDYLVAHGRXKEKEARAKFRQIVSAV----QYCH---QK 132
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+K N+LLD D KI+DFG + + + GA Y APE+F
Sbjct: 133 FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGA---PPYAAPELF 184
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 317 RYSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVL---NDSKGNGEEFINEVA 373
++S D K++ +F KL + G ++KG+ G+++ VKVL + S +F E
Sbjct: 3 KHSGIDFKQL--NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECP 59
Query: 374 SISRTSHVNVVTLLGFCFE--GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQ 431
+ SH NV+ +LG C LI ++ GSL ++ ++ + + ++
Sbjct: 60 RLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQ----SQAVK 115
Query: 432 IAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTG 491
A+ +ARG+ +LH I + ++++DED +IS + + K S S G
Sbjct: 116 FALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARIS------MADVKFSFQS-PG 167
Query: 492 ARGTVGYIAPEVFCRNIGEVSYKS 515
++APE + + + +S
Sbjct: 168 RMYAPAWVAPEALQKKPEDTNRRS 191
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 22/184 (11%)
Query: 333 KLGQGGYGSVYK-GKLIDGSNVAVKVLNDSK--GNGEEFINEVASISRT-SHVNVVTLLG 388
+LG+G + V + K++ G A K++N K + + A I R H N+V L
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 389 FCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
E LI++ V+ G L E + R S + + +L+ L C
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV-----------LHC 137
Query: 448 STR-ILHFDIKPHNILLDEDF---CPKISDFGLAKICNRKESIISMTGARGTVGYIAPEV 503
++H D+KP N+LL K++DFGLA ++ + G GT GY++PEV
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEV 195
Query: 504 FCRN 507
++
Sbjct: 196 LRKD 199
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K ++ G++ A+K+L+ K E +NE I + + +T L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLTKLE 108
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+ G + + R E H + A I EYLH
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 159
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+++D+ K++DFG AK + + GT Y+APE+
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNG---EEFINEVASISRTSHVNVVTLLGF 389
+G+G + V + ++ G VAV++++ ++ N ++ EV + +H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ L+ E+ S G E F Y + K QI + +Y H
Sbjct: 82 IETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAV----QYCH---QK 132
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAK---ICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+K N+LLD D KI+DFG + N+ ++ G+ Y APE+F
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC------GSPPYAAPELF 184
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 86/198 (43%), Gaps = 26/198 (13%)
Query: 321 ADIKKMTNSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLND----SKGNGEEFINEVA 373
A K N F Y LG+G +G V + G A+K+L +K + E
Sbjct: 1 ARAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 60
Query: 374 SISRTSHVNVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQI 432
+ T H +T L + F+ R + E+ + G L F + + + T E
Sbjct: 61 VLQNTRH-PFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERV----FTEERARFY 113
Query: 433 AVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI---ISM 489
I LEYLH S +++ DIK N++LD+D KI+DFGL KE I +M
Sbjct: 114 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC-----KEGISDGATM 165
Query: 490 TGARGTVGYIAPEVFCRN 507
GT Y+APEV N
Sbjct: 166 KTFCGTPEYLAPEVLEDN 183
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA++ ++ + + + + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDN--LNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 146
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 508 IG 509
G
Sbjct: 207 KG 208
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G G V Y L NVA+K L+ ++ + + E+ + +H N+++LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F ++ + EF + + + N + +L E + + + G+++LH
Sbjct: 90 N-VFTPQKT--LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH--- 143
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL 198
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K ++ G++ A+K+L+ K E +NE I + + +T L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLTKLE 108
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+ G + + R E H + A I EYLH
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 159
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+++D+ K++DFG AK + + GT Y+APE+
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 22/192 (11%)
Query: 326 MTNSFKY--KLGQGGYGSVYK-GKLIDGSNVAVKVLNDSK--GNGEEFINEVASISRT-S 379
MT+ ++ +LG+G + V + K+ G A K++N K + + A I R
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIAVGIAR 438
H N+V L E L+++ V+ G L E + R S + + +L+
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE------- 114
Query: 439 GLEYLHLGCSTRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGT 495
+ + HL I+H D+KP N+LL + K++DFGLA + + G GT
Sbjct: 115 SVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ--AWFGFAGT 169
Query: 496 VGYIAPEVFCRN 507
GY++PEV ++
Sbjct: 170 PGYLSPEVLRKD 181
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 85/195 (43%), Gaps = 26/195 (13%)
Query: 324 KKMTNSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLND----SKGNGEEFINEVASIS 376
K N F Y LG+G +G V + G A+K+L +K + E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 377 RTSHVNVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG 435
T H +T L + F+ R + E+ + G L F + + + T E
Sbjct: 61 NTRH-PFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERV----FTEERARFYGAE 113
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI---ISMTGA 492
I LEYLH S +++ DIK N++LD+D KI+DFGL KE I +M
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC-----KEGISDGATMKTF 165
Query: 493 RGTVGYIAPEVFCRN 507
GT Y+APEV N
Sbjct: 166 CGTPEYLAPEVLEDN 180
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 20/179 (11%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G YG+V G+ G+ VA+K L S+ + E+ + H NV+ LL
Sbjct: 33 VGSGAYGAVCSAVDGRT--GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAV-GIARGLEYLHLG 446
+ +F + F+ + + H+ E +Q V + +GL Y+H
Sbjct: 91 DVFTPDE---TLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH-- 145
Query: 447 CSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
+ I+H D+KP N+ ++ED KI DFGLA+ + + M G T Y APEV
Sbjct: 146 -AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-----MXGXVVTRWYRAPEVIL 198
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 85/195 (43%), Gaps = 26/195 (13%)
Query: 324 KKMTNSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLND----SKGNGEEFINEVASIS 376
K N F Y LG+G +G V + G A+K+L +K + E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 377 RTSHVNVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG 435
T H +T L + F+ R + E+ + G L F + + + T E
Sbjct: 61 NTRH-PFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERV----FTEERARFYGAE 113
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI---ISMTGA 492
I LEYLH S +++ DIK N++LD+D KI+DFGL KE I +M
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC-----KEGISDGATMKXF 165
Query: 493 RGTVGYIAPEVFCRN 507
GT Y+APEV N
Sbjct: 166 CGTPEYLAPEVLEDN 180
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K ++ G++ A+K+L+ K E +NE I + + +T L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLTKLE 108
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+ G + + R E H + A I EYLH
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 159
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+++D+ K++DFG AK + + GT Y+APE+
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 22/155 (14%)
Query: 333 KLGQGGYGSVYKGKLID---GSNVAVKVLNDSKGN---GEEFINEVASISRTS-HVNVVT 385
KLG+G YG V+K ID G VAVK + D+ N + E+ ++ S H N+V
Sbjct: 16 KLGKGAYGIVWKS--IDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVN 73
Query: 386 LLGFCFEGRRRA--LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYL 443
LL R L+++++ L I N + + L+++ ++YL
Sbjct: 74 LLNVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVHKQYVVYQLIKV-------IKYL 125
Query: 444 HLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK 478
H G +LH D+KP NILL+ + K++DFGL++
Sbjct: 126 HSGG---LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 22/178 (12%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNG---EEFINEVASISRTSHVNVVTLLGF 389
+G+G + V + ++ G VAV++++ ++ N ++ EV + +H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ L+ E+ S G E F Y + K QI + +Y H
Sbjct: 82 IETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQIVSAV----QYCH---QK 132
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLA---KICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+K N+LLD D KI+DFG + N+ + G+ Y APE+F
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC------GSPPYAAPELF 184
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 22/192 (11%)
Query: 326 MTNSFKY--KLGQGGYGSVYK-GKLIDGSNVAVKVLNDSK--GNGEEFINEVASISRT-S 379
MT+ ++ +LG+G + V + K+ G A K++N K + + A I R
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIAVGIAR 438
H N+V L E L+++ V+ G L E + R S + + +L+
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE------- 114
Query: 439 GLEYLHLGCSTRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESIISMTGARGT 495
+ + HL I+H D+KP N+LL + K++DFGLA + + G GT
Sbjct: 115 SVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ--AWFGFAGT 169
Query: 496 VGYIAPEVFCRN 507
GY++PEV ++
Sbjct: 170 PGYLSPEVLRKD 181
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K ++ G++ A+K+L+ K E +NE I + + + L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 93
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 94 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 144
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-----GTPEYLAPEIIL 197
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLGFC 390
+G+G YG V ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYK---LLKCQHLSNDHICYFLYQILRGLKYIH---SAN 148
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRNIG 509
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ + G
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 85/195 (43%), Gaps = 26/195 (13%)
Query: 324 KKMTNSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLND----SKGNGEEFINEVASIS 376
K N F Y LG+G +G V + G A+K+L +K + E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 377 RTSHVNVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG 435
T H +T L + F+ R + E+ + G L F + + + T E
Sbjct: 61 NTRH-PFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERV----FTEERARFYGAE 113
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI---ISMTGA 492
I LEYLH S +++ DIK N++LD+D KI+DFGL KE I +M
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC-----KEGISDGATMKXF 165
Query: 493 RGTVGYIAPEVFCRN 507
GT Y+APEV N
Sbjct: 166 CGTPEYLAPEVLEDN 180
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 85/195 (43%), Gaps = 26/195 (13%)
Query: 324 KKMTNSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLND----SKGNGEEFINEVASIS 376
K N F Y LG+G +G V + G A+K+L +K + E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 377 RTSHVNVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG 435
T H +T L + F+ R + E+ + G L F + + + T E
Sbjct: 61 NTRH-PFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERV----FTEERARFYGAE 113
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI---ISMTGA 492
I LEYLH S +++ DIK N++LD+D KI+DFGL KE I +M
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC-----KEGISDGATMKXF 165
Query: 493 RGTVGYIAPEVFCRN 507
GT Y+APEV N
Sbjct: 166 CGTPEYLAPEVLEDN 180
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 94
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 95 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 145
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+DE +++DFG AK + + GT Y+APE+
Sbjct: 146 SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 198
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + ++ GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA-----GTPEYLAPEIIL 211
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Query: 343 YKGKLIDGSNVAVKVLNDS---KGNGEEFINEVASISRTSHVNVVTLLGFCFEGRRRALI 399
Y+ L++ K ND K ++F NE+ I+ + +T G +I
Sbjct: 62 YEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYII 121
Query: 400 YEFVSNGSLEKFIYRNSSSIENHK--LTWETLLQIAVGIARGLEYLHLGCSTRILHFDIK 457
YE++ N S+ KF +N+ + + + I + Y+H I H D+K
Sbjct: 122 YEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVK 179
Query: 458 PHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
P NIL+D++ K+SDFG ++ K+ + G+RGT ++ PE F
Sbjct: 180 PSNILMDKNGRVKLSDFGESEYMVDKK----IKGSRGTYEFMPPEFF 222
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K ++ G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 23/188 (12%)
Query: 329 SFKYKLGQ----GGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFI----NEVASISRTS 379
S +Y+LG+ GG V+ + L D +VAVKVL F E + + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 380 HVNVVTLL----GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG 435
H +V + G ++ E+V +L ++ +T + +++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEV--- 121
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICNRKESIISMTGARG 494
IA + L+ I+H D+KP NIL+ K+ DFG+A+ I + S+ G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIG 181
Query: 495 TVGYIAPE 502
T Y++PE
Sbjct: 182 TAQYLSPE 189
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K ++ G++ A+K+L+ K E +NE I + + + L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 108
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 159
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K ++ G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K ++ G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 85/195 (43%), Gaps = 26/195 (13%)
Query: 324 KKMTNSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLND----SKGNGEEFINEVASIS 376
K N F Y LG+G +G V + G A+K+L +K + E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 377 RTSHVNVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG 435
T H +T L + F+ R + E+ + G L F + + + T E
Sbjct: 61 NTRH-PFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERV----FTEERARFYGAE 113
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI---ISMTGA 492
I LEYLH S +++ DIK N++LD+D KI+DFGL KE I +M
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLC-----KEGISDGATMKTF 165
Query: 493 RGTVGYIAPEVFCRN 507
GT Y+APEV N
Sbjct: 166 CGTPEYLAPEVLEDN 180
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDN--LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 146
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + + T Y APE+ +
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 508 IG 509
G
Sbjct: 207 KG 208
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++ +
Sbjct: 36 IGEGAYGMVCSAYDN--LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 147
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + + T Y APE+ +
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 508 IG 509
G
Sbjct: 208 KG 209
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 23/188 (12%)
Query: 329 SFKYKLGQ----GGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFI----NEVASISRTS 379
S +Y+LG+ GG V+ + L D +VAVKVL F E + + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 380 HVNVVTLL----GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG 435
H +V + G ++ E+V +L ++ +T + +++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEV--- 121
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICNRKESIISMTGARG 494
IA + L+ I+H D+KP NI++ K+ DFG+A+ I + S+ G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 495 TVGYIAPE 502
T Y++PE
Sbjct: 182 TAQYLSPE 189
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 23/188 (12%)
Query: 329 SFKYKLGQ----GGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFI----NEVASISRTS 379
S +Y+LG+ GG V+ + L D +VAVKVL F E + + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 380 HVNVVTLL----GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG 435
H +V + G ++ E+V +L ++ +T + +++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEV--- 121
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICNRKESIISMTGARG 494
IA + L+ I+H D+KP NI++ K+ DFG+A+ I + S+ G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 495 TVGYIAPE 502
T Y++PE
Sbjct: 182 TAQYLSPE 189
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K ++ G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+++D+ K++DFGLAK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
+G G +G V K ++ G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ K++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K ++ G++ A+K+L+ K E +NE I + + + L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 108
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 159
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-----GTPEYLAPEIIL 212
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 22/186 (11%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVV---- 384
+G+G YG S Y ++ VA+K ++ + + + + E+ + R H N++
Sbjct: 51 IGEGAYGMVCSAYDN--VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 385 TLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
+ E + + + L K + + L+ + + I RGL+Y+H
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMGADLYKLL-------KTQHLSNDHICYFLYQILRGLKYIH 161
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEV 503
S +LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+
Sbjct: 162 ---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 504 FCRNIG 509
+ G
Sbjct: 219 MLNSKG 224
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 16/191 (8%)
Query: 333 KLGQGGYGSVYKGKLI-DGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLG 388
+LG+G YG V K + + G +AVK + + + E+ ++ S+ VT G
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLL-QIAVGIARGLEYLHLGC 447
F + E + + SL+KF Y+ I+ + E +L +IAV I + LE+LH
Sbjct: 118 ALFREGDVWICMELM-DTSLDKF-YKQV--IDKGQTIPEDILGKIAVSIVKALEHLHSKL 173
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
S ++H D+KP N+L++ K+ DFG++ ++ T G Y+APE
Sbjct: 174 S--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDS---VAKTIDAGCKPYMAPERINPE 228
Query: 508 IGEVSY--KSD 516
+ + Y KSD
Sbjct: 229 LNQKGYSVKSD 239
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K ++ G++ A+K+L+ K E +NE I + + + L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 108
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 159
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX-----GTPEYLAPEIIL 211
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K ++ G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K ++ G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K ++ G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 102
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 103 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 153
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 154 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 206
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 350 GSNVAVKVLN-DSKGNGEEFINEVASISR---------TSHVNVVTLLGFCFEGRRRALI 399
G AVK++ ++ E + EV +R H +++TL+ L+
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178
Query: 400 YEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPH 459
++ + G L ++ E L+ + I + + +LH + I+H D+KP
Sbjct: 179 FDLMRKGELFDYL------TEKVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPE 229
Query: 460 NILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
NILLD++ ++SDFG + E + + GT GY+APE+
Sbjct: 230 NILLDDNMQIRLSDFGFSCHLEPGEKLRELC---GTPGYLAPEIL 271
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + H N++ +
Sbjct: 33 IGEGAYGMVCSAYDN--VNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 144
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 145 ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 508 IG 509
G
Sbjct: 205 KG 206
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 334 LGQGGYG---SVYKGKLIDGSNVAVKVLN--DSKGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G YG S Y ++ VA+K ++ + + + + E+ + H N++ +
Sbjct: 33 IGEGAYGMVCSAYDN--VNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
+ ++ +E +Y+ ++ L+ + + I RGL+Y+H S
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYK---LLKTQHLSNDHICYFLYQILRGLKYIH---S 144
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIIS-MTGARGTVGYIAPEVFCRN 507
+LH D+KP N+LL+ KI DFGLA++ + +T T Y APE+ +
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 508 IG 509
G
Sbjct: 205 KG 206
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G G V I NVA+K L+ ++ + + E+ + +H N++ LL
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN- 90
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
F ++ + EF + + + N S + +L E + + + G+++LH S
Sbjct: 91 VFTPQKS--LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH---SA 145
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL 198
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 21/194 (10%)
Query: 322 DIKKMTNSFKYKL----GQGGYGSVYKGKLIDGSN-VAVKVLNDSKGNGEEFINEVASIS 376
D+ M +S +Y+L G G +G + + VAVK + + E E+ +
Sbjct: 11 DLPIMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHR 70
Query: 377 RTSHVNVVTLLGFCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIAVG 435
H N+V A++ E+ S G L E+ S + + ++ L+
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS---- 126
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP--KISDFGLAKICNRKESIISMTGAR 493
G+ Y H + ++ H D+K N LLD P KI+DFG +K S A
Sbjct: 127 ---GVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKS---AV 177
Query: 494 GTVGYIAPEVFCRN 507
GT YIAPEV +
Sbjct: 178 GTPAYIAPEVLLKK 191
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K ++ G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+++D+ K++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 128
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 179
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 232
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 100
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY------AAQIVLTFEYLH--- 151
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 204
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 19/197 (9%)
Query: 324 KKMTNSFKY---KLGQGGYGSVYKGKLIDGSNVAVKVLNDSKGNGEEFI--NEVASISRT 378
+++ + F+Y K+G+G YG VYK K DG + L +G G E+A +
Sbjct: 16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLREL 75
Query: 379 SHVNVVTL--LGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHK---LTWETLLQIA 433
H NV++L + R+ L++++ + L I + +S N K L + +
Sbjct: 76 KHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLL 134
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILL----DEDFCPKISDFGLAKICNRK-ESIIS 488
I G+ YLH + +LH D+KP NIL+ E KI+D G A++ N + +
Sbjct: 135 YQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 191
Query: 489 MTGARGTVGYIAPEVFC 505
+ T Y APE+
Sbjct: 192 LDPVVVTFWYRAPELLL 208
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G G V Y L NVA+K L+ ++ + + E+ + +H N+++LL
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F ++ + EF + + + N + +L E + + + G+++LH
Sbjct: 83 N-VFTPQKT--LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH--- 136
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 137 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL 191
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 415 NSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDF 474
+S +T E L+ + +ARG+E+L S + +H D+ NILL E+ KI DF
Sbjct: 187 DSDGFYKEPITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDF 243
Query: 475 GLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSYKSD 516
GLA+ + + R + ++APE I S KSD
Sbjct: 244 GLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKI--YSTKSD 283
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 334 LGQGGYGSVYKG------KLIDGSNVAVKVLNDSKGNGE--EFINEVASISRTSH-VNVV 384
LG+G +G V + K VAVK+L + E + E+ ++ H +NVV
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 385 TLLGFCF-EGRRRALIYEFVSNGSLEKFI 412
LLG C +G +I E+ G+L ++
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G G V Y L NVA+K L+ ++ + + E+ + +H N+++LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F ++ + EF + + + N + +L E + + + G+++LH
Sbjct: 90 N-VFTPQKT--LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH--- 143
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL 198
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 108
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 109 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 159
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G G V Y L NVA+K L+ ++ + + E+ + +H N+++LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F ++ + EF + + + N + +L E + + + G+++LH
Sbjct: 90 N-VFTPQKT--LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLH--- 143
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL 198
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K ++ G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+++D+ +++DFGLAK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 81/187 (43%), Gaps = 27/187 (14%)
Query: 334 LGQGGYGSVYKGKLID---GSNVAVKVLNDSKGNGEEFIN---------EVASISRTSHV 381
LG G +G V+ +D V VK + K + +I E+A +SR H
Sbjct: 32 LGSGAFGFVWTA--VDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHA 89
Query: 382 NVVTLLG-FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
N++ +L F +G + ++ + S L FI R+ E L AVG
Sbjct: 90 NIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVG----- 144
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 500
YL L I+H DIK NI++ EDF K+ DFG A R + + GT+ Y A
Sbjct: 145 -YLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC---GTIEYCA 197
Query: 501 PEVFCRN 507
PEV N
Sbjct: 198 PEVLMGN 204
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLNDSKGNGEEFINEVAS----ISRTSHVNVVTLLG 388
+G+G Y V +L + A+KV+ N +E I+ V + + S+ + L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 389 FCFEGRRRAL-IYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
CF+ R + E+V+ G L + R E H + + +A L YLH
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------LNYLH--- 127
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I++ D+K N+LLD + K++D+G+ K R S GT YIAPE+
Sbjct: 128 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--GTPNYIAPEIL 182
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 22/191 (11%)
Query: 325 KMTNSFKYK--LGQGGYGSVYKGKLIDGSNV--AVKVLNDSKGNGEEFINEVASISRTSH 380
+ T+ ++ K +G G Y SV K + +N AVK+++ SK + E I + + H
Sbjct: 19 QFTDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEIL--LRYGQH 75
Query: 381 VNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
N++TL +G+ ++ E G L I R E + I + +
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASA------VLFTITKTV 129
Query: 441 EYLHLGCSTRILHFDIKPHNIL-LDEDFCP---KISDFGLAKICNRKESIISMTGARGTV 496
EYLH + ++H D+KP NIL +DE P +I DFG AK + ++ T
Sbjct: 130 EYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY--TA 184
Query: 497 GYIAPEVFCRN 507
++APEV R
Sbjct: 185 NFVAPEVLERQ 195
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
+G G +G V K ++ G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E++ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ K++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
+G G +G V K ++ G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E++ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ K++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K ++ G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+++D+ K++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLNDSKGNGEEFINEVAS----ISRTSHVNVVTLLG 388
+G+G Y V +L + A+KV+ N +E I+ V + + S+ + L
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 389 FCFEGRRRAL-IYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
CF+ R + E+V+ G L + R E H + + +A L YLH
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------LNYLH--- 138
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I++ D+K N+LLD + K++D+G+ K R S GT YIAPE+
Sbjct: 139 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--GTPNYIAPEIL 193
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 100
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 151
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 204
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLNDSKGNGEEFINEVAS----ISRTSHVNVVTLLG 388
+G+G Y V +L + A+KV+ N +E I+ V + + S+ + L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 389 FCFEGRRRAL-IYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
CF+ R + E+V+ G L + R E H + + +A L YLH
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------LNYLH--- 123
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I++ D+K N+LLD + K++D+G+ K R S GT YIAPE+
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC--GTPNYIAPEIL 178
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G G V I NVA+K L+ ++ + + E+ + +H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN- 90
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
F ++ + EF + + + N S + +L E + + + G+++LH S
Sbjct: 91 VFTPQKS--LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH---SA 145
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL 198
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE-KRIQQAVNFPFLVKLE 108
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+ G + + R E H + A I EYLH
Sbjct: 109 FSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 159
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ K++DFG AK + + GT Y+APE+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G G V Y L NVA+K L+ ++ + + E+ + +H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F ++ + EF + + + N S + +L E + + + G+++LH
Sbjct: 90 N-VFTPQKS--LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH--- 143
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL 198
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 14/181 (7%)
Query: 335 GQGGYGSVYKGKLID-GSNVAVK-VLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCFE 392
GQG +G+V GK G +VA+K V+ D + E + + ++ H N+V L + +
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPNIVQLQSYFYT 90
Query: 393 --GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAV---GIARGLEYLHLGC 447
R R IY V + ++R + ++ +L I V + R + LHL
Sbjct: 91 LGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPIL-IKVFLFQLIRSIGCLHLP- 148
Query: 448 STRILHFDIKPHNILLDE-DFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCR 506
S + H DIKPHN+L++E D K+ DFG AK + E ++ +R Y APE+
Sbjct: 149 SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSR---YYRAPELIFG 205
Query: 507 N 507
N
Sbjct: 206 N 206
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 108
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 159
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 108
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 159
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 108
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 159
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G G V Y L NVA+K L+ ++ + + E+ + +H N+++LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F ++ + EF + + + N + +L E + + + G+++LH
Sbjct: 90 N-VFTPQKT--LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH--- 143
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL 198
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 15/175 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNGE--EFINEVASISRTSHVNVVTLLGFC 390
+G GG+ V ++ G VA+K+++ + + E+ ++ H ++ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
+ ++ E+ G L +I I +L+ E + I + Y+H S
Sbjct: 78 ETANKIFMVLEYCPGGELFDYI------ISQDRLSEEETRVVFRQIVSAVAYVH---SQG 128
Query: 451 ILHFDIKPHNILLDEDFCPKISDFGL-AKICNRKESIISMTGARGTVGYIAPEVF 504
H D+KP N+L DE K+ DFGL AK K+ + G++ Y APE+
Sbjct: 129 YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD--YHLQTCCGSLAYAAPELI 181
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 29/182 (15%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 128
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 179
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR----GTVGYIAPEV 503
S +++ D+KP N+L+D+ +++DFG AK + GA GT Y+APE+
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---------RVKGATWTLCGTPEYLAPEI 230
Query: 504 FC 505
Sbjct: 231 IL 232
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 17/150 (11%)
Query: 333 KLGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVNVVTLLGFCF 391
KLG+G Y V++ + + V VK+L K N + ++ R N++TL
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGG-PNIITLADIVK 102
Query: 392 E--GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
+ R AL++E V+N ++ +Y+ + + +E L + L+Y H S
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFYMYEIL--------KALDYCH---SM 150
Query: 450 RILHFDIKPHNILLDEDFCP-KISDFGLAK 478
I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 13/175 (7%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G G V + G NVAVK L+ ++ + + E+ + +H N+++LL
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLN- 88
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
F ++ + EF + + + N + + +L E + + + G+++LH S
Sbjct: 89 VFTPQKT--LEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH---SA 143
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 144 GIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN---FMMTPYVVTRYYRAPEVI 195
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 329 SFKYKLGQGGYGSVYKGKLID-GSNVAVKVLND----SKGNGEEFINEVASISRTSHVNV 383
F LG+G +G V ++ + G AVKVL + E + E +S +
Sbjct: 26 EFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPF 85
Query: 384 VTLLGFCFEGRRRAL-IYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEY 442
+T L CF+ R + EFV+ G L I ++ E + A I L +
Sbjct: 86 LTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFY------AAEIISALMF 139
Query: 443 LHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK--ICNRKESIISMTGARGTVGYIA 500
LH I++ D+K N+LLD + K++DFG+ K ICN ++ GT YIA
Sbjct: 140 LH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG----VTTATFCGTPDYIA 192
Query: 501 PEVF 504
PE+
Sbjct: 193 PEIL 196
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 128
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 129 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 179
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 232
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 29/198 (14%)
Query: 321 ADIKKMTNSFKYKL----GQGGYGSVYKGKLIDGSN--VAVKVLNDSKGNGEEFINEVAS 374
AD+ M +S +Y+L G G +G V + SN VAVK + + E E+ +
Sbjct: 9 ADLPIMHDSDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKIDENVKREIIN 67
Query: 375 ISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIA 433
H N+V A++ E+ S G L E+ S + + ++ L+
Sbjct: 68 HRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-- 125
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP--KISDFGLAKICNRKESIISMTG 491
G+ Y H + ++ H D+K N LLD P KI DFG +K S + +
Sbjct: 126 -----GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQ 171
Query: 492 ARGTVG---YIAPEVFCR 506
+ TVG YIAPEV +
Sbjct: 172 PKSTVGTPAYIAPEVLLK 189
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+++D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIII 211
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLNDSKGNGEEFINEVAS----ISRTSHVNVVTLLG 388
+G+G Y V +L + A++V+ N +E I+ V + + S+ + L
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 389 FCFEGRRRAL-IYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
CF+ R + E+V+ G L + R E H + + +A L YLH
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------LNYLH--- 170
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I++ D+K N+LLD + K++D+G+ K R S GT YIAPE+
Sbjct: 171 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC--GTPNYIAPEIL 225
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G G V I NVA+K L+ ++ + + E+ + +H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN- 90
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
F ++ + EF + + + N S + +L E + + + G+++LH S
Sbjct: 91 VFTPQKS--LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SA 145
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL 198
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 33/208 (15%)
Query: 315 PRRYSYADIKKMTNSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLN--DSKGNGEEFI 369
P+R Y +++ F+ K LG+G YG V G VA+K + D +
Sbjct: 2 PKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 370 NEVASISRTSHVNVVTLLGF----CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKL 424
E+ + H N++T+ FE I + + L + I S ++
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF 117
Query: 425 TWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE 484
++TL R ++ LH + ++H D+KP N+L++ + K+ DFGLA+I +
Sbjct: 118 IYQTL--------RAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 485 SIIS--------MTGARGTVGYIAPEVF 504
+ S MT T Y APEV
Sbjct: 167 ADNSEPTGQQSGMTEXVATRWYRAPEVM 194
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K ++ G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+++D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 28/184 (15%)
Query: 334 LGQGGYGSVYKGKLIDGSNV----AVKVLNDS-----KGNGEEFINEVASISRTSHVNVV 384
LG G YG V+ + I G + A+KVL + E E + +
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 385 TLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG-IARGLEY 442
L + F+ + LI ++++ G L + + E+ +QI VG I LE+
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE-------VQIYVGEIVLALEH 174
Query: 443 LH-LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK--ICNRKESIISMTGARGTVGYI 499
LH LG I++ DIK NILLD + ++DFGL+K + + E GT+ Y+
Sbjct: 175 LHKLG----IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC---GTIEYM 227
Query: 500 APEV 503
AP++
Sbjct: 228 APDI 231
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 22/162 (13%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVK--VLNDSKGNGEEFINEVASISRTSHVNVVTLLGFC 390
LG GG G V+ D VA+K VL D + + + + E+ I R H N+V + F
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQ-SVKHALREIKIIRRLDHDNIVKV--FE 75
Query: 391 FEGRRRALIYEFVSNGSLEK----FIYRN------SSSIENHKLTWETLLQIAVGIARGL 440
G + + + V GSL + +I + ++ +E L E + RGL
Sbjct: 76 ILGPSGSQLTDDV--GSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGL 133
Query: 441 EYLHLGCSTRILHFDIKPHNILLD-EDFCPKISDFGLAKICN 481
+Y+H S +LH D+KP N+ ++ ED KI DFGLA+I +
Sbjct: 134 KYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD 172
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 326 MTNSFKY--KLGQGGYGSVYK-GKLIDGSNVAVKVLNDSK--GNGEEFINEVASISRT-S 379
MT+ ++ +G+G + V + KL G A K++N K + + A I R
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLK 61
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIAVGIAR 438
H N+V L E L+++ V+ G L E + R S + + +L+
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV----- 116
Query: 439 GLEYLHLGCSTR-ILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARG 494
L C ++H D+KP N+LL + K++DFGLA + + G G
Sbjct: 117 ------LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ--AWFGFAG 168
Query: 495 TVGYIAPEVF 504
T GY++PEV
Sbjct: 169 TPGYLSPEVL 178
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 14/190 (7%)
Query: 333 KLGQGGYGSVYKGKLI-DGSNVAVKVLNDSKGNGEE---FINEVASISRTSHVNVVTLLG 388
+LG+G YG V K + + G +AVK + + + E+ ++ S+ VT G
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
F + E + + SL+KF Y+ + + + L +IAV I + LE+LH S
Sbjct: 74 ALFREGDVWICMELM-DTSLDKF-YKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS 130
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
++H D+KP N+L++ K+ DFG++ ++ G Y+APE +
Sbjct: 131 --VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKDIDAGCKPYMAPERINPEL 185
Query: 509 GEVSY--KSD 516
+ Y KSD
Sbjct: 186 NQKGYSVKSD 195
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 16/185 (8%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLND---SKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G+G +G V + V A+K+L+ K + F E I ++ V L +
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 390 CFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
F+ R ++ E++ G L N S + W V +A L+ +H S
Sbjct: 137 AFQDDRYLYMVMEYMPGGDL-----VNLMSNYDVPEKWARFYTAEVVLA--LDAIH---S 186
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
+H D+KP N+LLD+ K++DFG N KE ++ A GT YI+PEV
Sbjct: 187 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN-KEGMVRCDTAVGTPDYISPEVLKSQG 245
Query: 509 GEVSY 513
G+ Y
Sbjct: 246 GDGYY 250
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 16/185 (8%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLND---SKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G+G +G V + V A+K+L+ K + F E I ++ V L +
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 390 CFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
F+ R ++ E++ G L N S + W V +A L+ +H S
Sbjct: 142 AFQDDRYLYMVMEYMPGGDL-----VNLMSNYDVPEKWARFYTAEVVLA--LDAIH---S 191
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
+H D+KP N+LLD+ K++DFG N KE ++ A GT YI+PEV
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN-KEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 509 GEVSY 513
G+ Y
Sbjct: 251 GDGYY 255
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 108
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+ G + + R E H + A I EYLH
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 159
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+++D+ K++DFG AK + + GT Y+APE+
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 212
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 22/184 (11%)
Query: 333 KLGQGGYGSVYK-GKLIDGSNVAVKVLNDSK--GNGEEFINEVASISRT-SHVNVVTLLG 388
+LG+G + V + K++ G A ++N K + + A I R H N+V L
Sbjct: 18 ELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 77
Query: 389 FCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
E LI++ V+ G L E + R S + + +L+ L C
Sbjct: 78 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV-----------LHC 126
Query: 448 STR-ILHFDIKPHNILLDEDF---CPKISDFGLAKICNRKESIISMTGARGTVGYIAPEV 503
++H ++KP N+LL K++DFGLA ++ + G GT GY++PEV
Sbjct: 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEV 184
Query: 504 FCRN 507
++
Sbjct: 185 LRKD 188
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 33/208 (15%)
Query: 315 PRRYSYADIKKMTNSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLN--DSKGNGEEFI 369
P+R Y +++ F+ K LG+G YG V G VA+K + D +
Sbjct: 2 PKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 370 NEVASISRTSHVNVVTLLGF----CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKL 424
E+ + H N++T+ FE I + + L + I S ++
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF 117
Query: 425 TWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE 484
++TL R ++ LH + ++H D+KP N+L++ + K+ DFGLA+I +
Sbjct: 118 IYQTL--------RAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 485 SIIS--------MTGARGTVGYIAPEVF 504
+ S MT T Y APEV
Sbjct: 167 ADNSEPTGQQSGMTEYVATRWYRAPEVM 194
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
+ F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
+ F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 16/185 (8%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLND---SKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G+G +G V + V A+K+L+ K + F E I ++ V L +
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 390 CFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
F+ R ++ E++ G L N S + W V +A L+ +H S
Sbjct: 142 AFQDDRYLYMVMEYMPGGDL-----VNLMSNYDVPEKWARFYTAEVVLA--LDAIH---S 191
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNI 508
+H D+KP N+LLD+ K++DFG N KE ++ A GT YI+PEV
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN-KEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 509 GEVSY 513
G+ Y
Sbjct: 251 GDGYY 255
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
+ F+ ++ E+V G + + R E H + A I EYLH
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIIL 211
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 17/193 (8%)
Query: 322 DIKKMTNSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFINEVASISRT 378
D + N F+Y LG+G +G V K G A+K+L ++ + + +R
Sbjct: 4 DPRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 63
Query: 379 ---SHVNVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAV 434
S +T L + F+ R + E+ + G L + R E+ +
Sbjct: 64 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY------GA 117
Query: 435 GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARG 494
I L+YLH +++ D+K N++LD+D KI+DFGL K + + +M G
Sbjct: 118 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKXFCG 173
Query: 495 TVGYIAPEVFCRN 507
T Y+APEV N
Sbjct: 174 TPEYLAPEVLEDN 186
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 15/176 (8%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G G V + G NVAVK L+ ++ + + E+ + +H N+++LL
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLN- 90
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
F ++ + EF + + + N + + +L E + + + G+++LH S
Sbjct: 91 VFTPQKT--LEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH---SA 145
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKI-CNRKESIISMTGARGTVGYIAPEVF 504
I+H D+KP NI++ D KI DFGLA+ C MT T Y APEV
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN----FMMTPYVVTRYYRAPEVI 197
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 424 LTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRK 483
LT E L+ + +A+G+E+L S + +H D+ NILL E KI DFGLA+ +
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 484 ESIISMTGARGTVGYIAPEVF 504
+ AR + ++APE
Sbjct: 252 PDYVRKGDARLPLKWMAPETI 272
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 424 LTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRK 483
LT E L+ + +A+G+E+L S + +H D+ NILL E KI DFGLA+ +
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 484 ESIISMTGARGTVGYIAPEVF 504
+ AR + ++APE
Sbjct: 245 PDYVRKGDARLPLKWMAPETI 265
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 26/174 (14%)
Query: 352 NVAVKVLNDSK---GNGEE------FINEVASISRTSHVNVVTLLGFCFEGRRRALIYEF 402
VA+K+++ K G+ E E+ + + +H ++ + F F+ ++ E
Sbjct: 43 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLEL 101
Query: 403 VSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNIL 462
+ G L + N +L T + ++YLH I+H D+KP N+L
Sbjct: 102 MEGGEL------FDKVVGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVL 152
Query: 463 L---DEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 513
L +ED KI+DFG +KI + ++ GT Y+APEV ++G Y
Sbjct: 153 LSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLAPEVLV-SVGTAGY 202
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 26/174 (14%)
Query: 352 NVAVKVLNDSK---GNGEE------FINEVASISRTSHVNVVTLLGFCFEGRRRALIYEF 402
VA+K+++ K G+ E E+ + + +H ++ + F F+ ++ E
Sbjct: 37 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLEL 95
Query: 403 VSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNIL 462
+ G L + N +L T + ++YLH I+H D+KP N+L
Sbjct: 96 MEGGEL------FDKVVGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVL 146
Query: 463 L---DEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 513
L +ED KI+DFG +KI + ++ GT Y+APEV ++G Y
Sbjct: 147 LSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLAPEVLV-SVGTAGY 196
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 424 LTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRK 483
LT E L+ + +A+G+E+L S + +H D+ NILL E KI DFGLA+ +
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 484 ESIISMTGARGTVGYIAPEVF 504
+ AR + ++APE
Sbjct: 254 PDYVRKGDARLPLKWMAPETI 274
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 26/174 (14%)
Query: 352 NVAVKVLNDSK---GNGEE------FINEVASISRTSHVNVVTLLGFCFEGRRRALIYEF 402
VA+K+++ K G+ E E+ + + +H ++ + F F+ ++ E
Sbjct: 37 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLEL 95
Query: 403 VSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNIL 462
+ G L + N +L T + ++YLH I+H D+KP N+L
Sbjct: 96 MEGGEL------FDKVVGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVL 146
Query: 463 L---DEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 513
L +ED KI+DFG +KI + ++ GT Y+APEV ++G Y
Sbjct: 147 LSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLAPEVLV-SVGTAGY 196
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 26/174 (14%)
Query: 352 NVAVKVLNDSK---GNGEE------FINEVASISRTSHVNVVTLLGFCFEGRRRALIYEF 402
VA+K+++ K G+ E E+ + + +H ++ + F F+ ++ E
Sbjct: 36 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLEL 94
Query: 403 VSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNIL 462
+ G L + N +L T + ++YLH I+H D+KP N+L
Sbjct: 95 MEGGEL------FDKVVGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVL 145
Query: 463 L---DEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 513
L +ED KI+DFG +KI + ++ GT Y+APEV ++G Y
Sbjct: 146 LSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLAPEVLV-SVGTAGY 195
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 424 LTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRK 483
LT E L+ + +A+G+E+L S + +H D+ NILL E KI DFGLA+ +
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 484 ESIISMTGARGTVGYIAPEVF 504
+ AR + ++APE
Sbjct: 247 PDYVRKGDARLPLKWMAPETI 267
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT Y+AP +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPAIIL 211
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 26/174 (14%)
Query: 352 NVAVKVLNDSK---GNGEE------FINEVASISRTSHVNVVTLLGFCFEGRRRALIYEF 402
VA+K+++ K G+ E E+ + + +H ++ + F F+ ++ E
Sbjct: 37 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLEL 95
Query: 403 VSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNIL 462
+ G L + N +L T + ++YLH I+H D+KP N+L
Sbjct: 96 MEGGEL------FDKVVGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVL 146
Query: 463 L---DEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVSY 513
L +ED KI+DFG +KI + ++ GT Y+APEV ++G Y
Sbjct: 147 LSSQEEDCLIKITDFGHSKILGETSLMRTLC---GTPTYLAPEVLV-SVGTAGY 196
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 370 NEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETL 429
E+ + + +H ++ + F F+ ++ E + G L + N +L T
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL------FDKVVGNKRLKEATC 241
Query: 430 LQIAVGIARGLEYLHLGCSTRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESI 486
+ ++YLH I+H D+KP N+LL +ED KI+DFG +KI +
Sbjct: 242 KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 298
Query: 487 ISMTGARGTVGYIAPEVFCRNIGEVSY 513
++ GT Y+APEV ++G Y
Sbjct: 299 RTLC---GTPTYLAPEVLV-SVGTAGY 321
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 23/188 (12%)
Query: 329 SFKYKLGQ----GGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFI----NEVASISRTS 379
S +Y+LG+ GG V+ + L +VAVKVL F E + + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 380 HVNVVTLLGF----CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG 435
H +V + G ++ E+V +L ++ +T + +++
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEV--- 121
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICNRKESIISMTGARG 494
IA + L+ I+H D+KP NI++ K+ DFG+A+ I + S+ G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 495 TVGYIAPE 502
T Y++PE
Sbjct: 182 TAQYLSPE 189
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G G V I NVA+K L+ ++ + + E+ + +H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 90
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
F ++ + EF + + + N S + +L E + + + G+++LH S
Sbjct: 91 VFTPQKS--LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SA 145
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL 198
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 24/194 (12%)
Query: 322 DIKKMTN-SFKYKLGQGGYGSVYKGKLIDGSNV-AVKVLND----SKGNGEEFINEVASI 375
D K+T+ +F LG+G +G V + + AVK+L + E + E +
Sbjct: 336 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL 395
Query: 376 SRTSHVNVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAV 434
+ +T L CF+ R + E+V+ G L I + E H + + A
Sbjct: 396 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY------AA 449
Query: 435 GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR- 493
IA GL +L S I++ D+K N++LD + KI+DFG+ KE+I +
Sbjct: 450 EIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMC-----KENIWDGVTTKX 501
Query: 494 --GTVGYIAPEVFC 505
GT YIAPE+
Sbjct: 502 FCGTPDYIAPEIIA 515
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G G V Y L NVA+K L+ ++ + + E+ + +H N+++LL
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F ++ + EF + + + N + +L E + + + G+++LH
Sbjct: 128 N-VFTPQKT--LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH--- 181
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
S I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 235
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 370 NEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETL 429
E+ + + +H ++ + F F+ ++ E + G L + N +L T
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL------FDKVVGNKRLKEATC 255
Query: 430 LQIAVGIARGLEYLHLGCSTRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKESI 486
+ ++YLH I+H D+KP N+LL +ED KI+DFG +KI +
Sbjct: 256 KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 312
Query: 487 ISMTGARGTVGYIAPEVFCRNIGEVSY 513
++ GT Y+APEV ++G Y
Sbjct: 313 RTLC---GTPTYLAPEVLV-SVGTAGY 335
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G G V Y L NVA+K L+ ++ + + E+ + +H N+++LL
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F ++ + EF + + + N + +L E + + + G+++LH
Sbjct: 128 N-VFTPQKT--LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH--- 181
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
S I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 235
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G G V Y L NVA+K L+ ++ + + E+ + +H N+++LL
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F ++ + EF + + + N + +L E + + + G+++LH
Sbjct: 91 N-VFTPQKT--LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH--- 144
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
S I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 198
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 27/190 (14%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVK-VLNDSKGNGEEFINEVASISRTS-HVNVVTLLGFCF 391
LG G G+V G VAVK +L D + + E+ ++ + H NV+ +C
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRY--YCS 77
Query: 392 EGRRRALIYEF-VSNGSLEKFIYRNSSSIENHKLTWE-TLLQIAVGIARGLEYLHLGCST 449
E R L + N +L+ + + S EN KL E + + IA G+ +LH S
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 134
Query: 450 RILHFDIKPHNILLD-------------EDFCPKISDFGLAKICNRKESII--SMTGARG 494
+I+H D+KP NIL+ E+ ISDFGL K + +S ++ G
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSG 194
Query: 495 TVGYIAPEVF 504
T G+ APE+
Sbjct: 195 TSGWRAPELL 204
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G G V Y L NVA+K L+ ++ + + E+ + +H N+++LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F ++ + EF + + + N + +L E + + + G+++LH
Sbjct: 90 N-VFTPQKT--LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH--- 143
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
S I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 17/187 (9%)
Query: 328 NSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFINEVASISRT---SHV 381
N F+Y LG+G +G V K G A+K+L ++ + + +R S
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 382 NVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+T L + F+ R + E+ + G L + R E+ + I L
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY------GAEIVSAL 121
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 500
+YLH +++ D+K N++LD+D KI+DFGL K + + +M GT Y+A
Sbjct: 122 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKXFCGTPEYLA 177
Query: 501 PEVFCRN 507
PEV N
Sbjct: 178 PEVLEDN 184
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G G V Y L NVA+K L+ ++ + + E+ + +H N+++LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F ++ + EF + + + N + +L E + + + G+++LH
Sbjct: 90 N-VFTPQKT--LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH--- 143
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
S I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G G V Y L NVA+K L+ ++ + + E+ + +H N+++LL
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F ++ + EF + + + N + +L E + + + G+++LH
Sbjct: 83 N-VFTPQKT--LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH--- 136
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
S I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 137 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 190
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 367 EFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
+ I E+ + + +V G + ++ E + GSL++ + E ++
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK------EAKRIPE 113
Query: 427 ETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 486
E L ++++ + RGL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 114 EILGKVSIAVLRGLAYLR--EKHQIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLI 166
Query: 487 ISMTGA-RGTVGYIAPE 502
SM + GT Y+APE
Sbjct: 167 DSMANSFVGTRSYMAPE 183
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G G V Y L NVA+K L+ ++ + + E+ + +H N+++LL
Sbjct: 31 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F ++ + EF + + + N + +L E + + + G+++LH
Sbjct: 89 N-VFTPQKT--LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH--- 142
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
S I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 143 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 196
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 17/187 (9%)
Query: 328 NSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFINEVASISRT---SHV 381
N F+Y LG+G +G V K G A+K+L ++ + + +R S
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 382 NVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+T L + F+ R + E+ + G L + R E+ + I L
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY------GAEIVSAL 122
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 500
+YLH +++ D+K N++LD+D KI+DFGL K + + +M GT Y+A
Sbjct: 123 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKXFCGTPEYLA 178
Query: 501 PEVFCRN 507
PEV N
Sbjct: 179 PEVLEDN 185
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G G V Y L NVA+K L+ ++ + + E+ + +H N+++LL
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F ++ + EF + + + N + +L E + + + G+++LH
Sbjct: 84 N-VFTPQKT--LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH--- 137
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
S I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 191
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G G V Y L NVA+K L+ ++ + + E+ + +H N+++LL
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F ++ + EF + + + N + +L E + + + G+++LH
Sbjct: 84 N-VFTPQKT--LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH--- 137
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
S I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 191
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 334 LGQGGYGSV---YKGKLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLL 387
+G G G V Y L NVA+K L+ ++ + + E+ + +H N+++LL
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F ++ + EF + + + N + +L E + + + G+++LH
Sbjct: 91 N-VFTPQKT--LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH--- 144
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
S I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 198
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G G V I NVA+K L+ ++ + + E+ + +H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 90
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
F ++ + EF + + + N S + +L E + + + G+++LH S
Sbjct: 91 VFTPQKS--LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SA 145
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVIL 198
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 23/188 (12%)
Query: 329 SFKYKLGQ----GGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFI----NEVASISRTS 379
S +Y+LG+ GG V+ + L +VAVKVL F E + + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 380 HVNVVTLL----GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG 435
H +V + G ++ E+V +L ++ +T + +++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEV--- 121
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICNRKESIISMTGARG 494
IA + L+ I+H D+KP NI++ K+ DFG+A+ I + S+ G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 495 TVGYIAPE 502
T Y++PE
Sbjct: 182 TAQYLSPE 189
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 24/194 (12%)
Query: 322 DIKKMTN-SFKYKLGQGGYGSVYKGKLIDGSNV-AVKVLND----SKGNGEEFINEVASI 375
D K+T+ +F LG+G +G V + + AVK+L + E + E +
Sbjct: 15 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL 74
Query: 376 SRTSHVNVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAV 434
+ +T L CF+ R + E+V+ G L I + E H + + A
Sbjct: 75 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY------AA 128
Query: 435 GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR- 493
IA GL +L S I++ D+K N++LD + KI+DFG+ KE+I +
Sbjct: 129 EIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMC-----KENIWDGVTTKX 180
Query: 494 --GTVGYIAPEVFC 505
GT YIAPE+
Sbjct: 181 FCGTPDYIAPEIIA 194
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 17/187 (9%)
Query: 328 NSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFINEVASISRT---SHV 381
N F+Y LG+G +G V K G A+K+L ++ + + +R S
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 382 NVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+T L + F+ R + E+ + G L + R E+ + I L
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY------GAEIVSAL 261
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 500
+YLH +++ D+K N++LD+D KI+DFGL K + + +M GT Y+A
Sbjct: 262 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGTPEYLA 317
Query: 501 PEVFCRN 507
PEV N
Sbjct: 318 PEVLEDN 324
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 17/187 (9%)
Query: 328 NSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFINEVASISRT---SHV 381
N F+Y LG+G +G V K G A+K+L ++ + + +R S
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 382 NVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+T L + F+ R + E+ + G L + R E+ + I L
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY------GAEIVSAL 264
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIA 500
+YLH +++ D+K N++LD+D KI+DFGL K + + +M GT Y+A
Sbjct: 265 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGTPEYLA 320
Query: 501 PEVFCRN 507
PEV N
Sbjct: 321 PEVLEDN 327
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 23/188 (12%)
Query: 329 SFKYKLGQ----GGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFI----NEVASISRTS 379
S +Y+LG+ GG V+ + L +VAVKVL F E + + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 380 HVNVVTLL----GFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG 435
H +V + G ++ E+V +L ++ +T + +++
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEV--- 138
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAK-ICNRKESIISMTGARG 494
IA + L+ I+H D+KP NI++ K+ DFG+A+ I + S+ G
Sbjct: 139 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 198
Query: 495 TVGYIAPE 502
T Y++PE
Sbjct: 199 TAQYLSPE 206
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 334 LGQGGYGSVYKGKLID-GSNVAVKVLNDSK----GNGEEFINEVASISRTSHVNVVTLLG 388
LG G +G V K + G++ A+K+L+ K E +NE I + + + L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE-KRILQAVNFPFLVKLE 107
Query: 389 FCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ ++ E+V+ G + + R E H + A I EYLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH--- 158
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFC 505
S +++ D+KP N+L+D+ +++DFG AK + + GT +APE+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEALAPEIIL 211
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 333 KLGQGGYGSVYKGKLI-DGSNVAVKVLNDSKGNGEE--FINEVASISRTSHVN-VVTLLG 388
+LG+G YG V K + + G AVK + + + E+ + ++ RT VT G
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 389 FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCS 448
F + E + SL+KF Y+ + + + L +IAV I + LE+LH S
Sbjct: 101 ALFREGDVWICXEL-XDTSLDKF-YKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS 157
Query: 449 TRILHFDIKPHNILLDEDFCPKISDFGLA 477
++H D+KP N+L++ K DFG++
Sbjct: 158 --VIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 13/175 (7%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G G V I NVA+K L+ ++ + + E+ + +H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 90
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
F ++ + EF + + + N + +L E + + + G+++LH S
Sbjct: 91 VFTPQKS--LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SA 145
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPEVVTRYYRAPEVI 197
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 13/175 (7%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G G V I NVA+K L+ ++ + + E+ + +H N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 84
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
F ++ + EF + + + N + +L E + + + G+++LH S
Sbjct: 85 VFTPQKS--LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SA 139
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 191
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 343 YKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTS-HVNVVTLLGFCFEGRRRALIYE 401
Y K+ID + + + E + EV + + S H N++ L L+++
Sbjct: 45 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 104
Query: 402 FVSNGSLEKFIYRNSSSIENH-KLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHN 460
+ G L ++ + E + LL++ + + I+H D+KP N
Sbjct: 105 LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK----------LNIVHRDLKPEN 154
Query: 461 ILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
ILLD+D K++DFG + + E + S+ GT Y+APE+
Sbjct: 155 ILLDDDMNIKLTDFGFSCQLDPGEKLRSVC---GTPSYLAPEII 195
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVK-VLNDSKGNGEEFINEVASISRTS-HVNVVTLLGFCF 391
LG G G+V G VAVK +L D + + E+ ++ + H NV+ +C
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRY--YCS 77
Query: 392 EGRRRALIYEF-VSNGSLEKFIYRNSSSIENHKLTWE-TLLQIAVGIARGLEYLHLGCST 449
E R L + N +L+ + + S EN KL E + + IA G+ +LH S
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 134
Query: 450 RILHFDIKPHNILLD-------------EDFCPKISDFGLAKICNRKESII--SMTGARG 494
+I+H D+KP NIL+ E+ ISDFGL K + + ++ G
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 194
Query: 495 TVGYIAPEVF 504
T G+ APE+
Sbjct: 195 TSGWRAPELL 204
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 317 RYSYADIKKMTNSFKYKLGQGGYGSVYKGKLIDGSNVAVKVL---NDSKGNGEEFINEVA 373
++S D K++ +F KL + G ++KG+ G+++ VKVL + S +F E
Sbjct: 3 KHSGIDFKQL--NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECP 59
Query: 374 SISRTSHVNVVTLLGFC--FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQ 431
+ SH NV+ +LG C LI + GSL ++ ++ + + ++
Sbjct: 60 RLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQ----SQAVK 115
Query: 432 IAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTG 491
A+ ARG +LH I + ++ +DED +IS + K S S G
Sbjct: 116 FALDXARGXAFLHT-LEPLIPRHALNSRSVXIDEDXTARIS------XADVKFSFQS-PG 167
Query: 492 ARGTVGYIAPEVFCRNIGEVSYKS 515
++APE + + + +S
Sbjct: 168 RXYAPAWVAPEALQKKPEDTNRRS 191
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 33/208 (15%)
Query: 315 PRRYSYADIKKMTNSFKYK--LGQGGYGSVYKGK-LIDGSNVAVKVLN--DSKGNGEEFI 369
P+R Y +++ F+ K LG+G YG V G VA+K + D +
Sbjct: 2 PKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 370 NEVASISRTSHVNVVTLLGF----CFEGRRRALIYEFVSNGSLEKFIYRNSSSIEN-HKL 424
E+ + H N++T+ FE I + + L + I S ++
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF 117
Query: 425 TWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE 484
++TL R ++ LH + ++H D+KP N+L++ + K+ DFGLA+I +
Sbjct: 118 IYQTL--------RAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 485 SIIS--------MTGARGTVGYIAPEVF 504
+ S M T Y APEV
Sbjct: 167 ADNSEPTGQQSGMVEFVATRWYRAPEVM 194
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 13/175 (7%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G G V I NVA+K L+ ++ + + E+ + +H N++ LL
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 95
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
F ++ + EF + + + N + +L E + + + G+++LH S
Sbjct: 96 VFTPQKS--LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SA 150
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 151 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 202
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 29/197 (14%)
Query: 322 DIKKMTNSFKYKL----GQGGYGSVYKGKLIDGSN--VAVKVLNDSKGNGEEFINEVASI 375
D+ M +S +Y+L G G +G V + SN VAVK + + E+ +
Sbjct: 11 DLPIMHDSDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKIAANVKREIINH 69
Query: 376 SRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIAV 434
H N+V A++ E+ S G L E+ S + + ++ L+
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS--- 126
Query: 435 GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP--KISDFGLAK---ICNRKESIISM 489
G+ Y H + ++ H D+K N LLD P KI DFG +K + ++ +S +
Sbjct: 127 ----GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-- 177
Query: 490 TGARGTVGYIAPEVFCR 506
GT YIAPEV +
Sbjct: 178 ----GTPAYIAPEVLLK 190
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 20/183 (10%)
Query: 333 KLGQGGYGSVYK-GKLIDGSNVAVKVLNDSK--GNGEEFINEVASISRT-SHVNVVTLLG 388
+LG+G + V + K A K++N K + + A I R H N+V L
Sbjct: 38 ELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 97
Query: 389 FCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
E L+++ V+ G L E + R S + +L+ + ++H
Sbjct: 98 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILE-------SVNHIH--- 147
Query: 448 STRILHFDIKPHNILLD---EDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+KP N+LL + K++DFGLA ++ + G GT GY++PEV
Sbjct: 148 QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQ--AWFGFAGTPGYLSPEVL 205
Query: 505 CRN 507
++
Sbjct: 206 RKD 208
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVK-VLNDSKGNGEEFINEVASISRTS-HVNVVTLLGFCF 391
LG G G+V G VAVK +L D + + E+ ++ + H NV+ +C
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRY--YCS 95
Query: 392 EGRRRALIYEF-VSNGSLEKFIYRNSSSIENHKLTWE-TLLQIAVGIARGLEYLHLGCST 449
E R L + N +L+ + + S EN KL E + + IA G+ +LH S
Sbjct: 96 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 152
Query: 450 RILHFDIKPHNILLD-------------EDFCPKISDFGLAKICNRKESII--SMTGARG 494
+I+H D+KP NIL+ E+ ISDFGL K + + ++ G
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 212
Query: 495 TVGYIAPEVF 504
T G+ APE+
Sbjct: 213 TSGWRAPELL 222
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVK-VLNDSKGNGEEFINEVASISRTS-HVNVVTLLGFCF 391
LG G G+V G VAVK +L D + + E+ ++ + H NV+ +C
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRY--YCS 95
Query: 392 EGRRRALIYEF-VSNGSLEKFIYRNSSSIENHKLTWE-TLLQIAVGIARGLEYLHLGCST 449
E R L + N +L+ + + S EN KL E + + IA G+ +LH S
Sbjct: 96 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 152
Query: 450 RILHFDIKPHNILLD-------------EDFCPKISDFGLAKICNRKESII--SMTGARG 494
+I+H D+KP NIL+ E+ ISDFGL K + + ++ G
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 212
Query: 495 TVGYIAPEVF 504
T G+ APE+
Sbjct: 213 TSGWRAPELL 222
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 20/180 (11%)
Query: 334 LGQGGYGSVYKGKLIDGSNVAVKVLNDSKG-------NGEEFIN-EVASISRTSHVNVVT 385
LG+G YG V + ++D + + + K NGE + E+ + R H NV+
Sbjct: 13 LGEGSYGKVKE--VLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 386 LLGFCF--EGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYL 443
L+ + E ++ ++ E+ G E S+ + + GLEYL
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGMQEML-----DSVPEKRFPVCQAHGYFCQLIDGLEYL 125
Query: 444 HLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEV 503
H S I+H DIKP N+LL KIS G+A+ + + + ++G+ + PE+
Sbjct: 126 H---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEI 182
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVKVLNDS----KGNGEEFINEVASISRTSHVNVVTLLG 388
+G+G +G V + + AVKVL K + ++E + + + L
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 389 FCFE-GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F F+ + + ++++ G L + R +E + A IA L YLH
Sbjct: 106 FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFY------AAEIASALGYLH--- 156
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
S I++ D+KP NILLD ++DFGL K S S GT Y+APEV +
Sbjct: 157 SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFC--GTPEYLAPEVLHKQ 214
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 26/180 (14%)
Query: 334 LGQGGYGSV-----YKGKLIDGSNVAVKVLNDSKGNGEEF----INEVASISRTSHVNVV 384
LG+G +G V YK + VA+K ++ + E++ + H +++
Sbjct: 17 LGEGSFGKVKLATHYKTQ----QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 385 TLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
L ++ E+ + G L +I +E ++T + + I +EY H
Sbjct: 73 KLYDVITTPTDIVMVIEY-AGGELFDYI------VEKKRMTEDEGRRFFQQIICAIEYCH 125
Query: 445 LGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
+I+H D+KP N+LLD++ KI+DFGL+ I + + G+ Y APEV
Sbjct: 126 ---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVI 179
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 13/175 (7%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G G V I NVA+K L+ ++ + + E+ + +H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 90
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
F ++ + EF + + + N + +L E + + + G+++LH S
Sbjct: 91 VFTPQKS--LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SA 145
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 333 KLGQGGYGSVYKGKLIDGSN-VAVKVLNDSKGNGEEFINEVASIS--RTSHVN------V 383
KLG G + +V+ I G VA+KV+ ++ E ++E+ + R S N V
Sbjct: 28 KLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMV 87
Query: 384 VTLLG----FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
V LL G +++E + + L+ I N L + +I + +G
Sbjct: 88 VQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQG-----LPLPCVKKIIQQVLQG 142
Query: 440 LEYLHLGCSTRILHFDIKPHNILL 463
L+YLH C RI+H DIKP NILL
Sbjct: 143 LDYLHTKC--RIIHTDIKPENILL 164
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 34/176 (19%)
Query: 350 GSNVAVKVLNDSK-----GNGEEFINEVASISRT-SHVNVVTLLGFCFEGRRRALIYEFV 403
G AVK+++ +K G E + ASI H ++V LL +++EF+
Sbjct: 49 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108
Query: 404 SNGSL---------EKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHF 454
L F+Y S ++ +H + I L Y H I+H
Sbjct: 109 DGADLCFEIVKRADAGFVY--SEAVASHYMRQ---------ILEALRYCH---DNNIIHR 154
Query: 455 DIKPHNILL--DEDFCP-KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
D+KP N+LL E+ P K+ DFG+A ES + G GT ++APEV R
Sbjct: 155 DVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGTPHFMAPEVVKRE 208
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 333 KLGQGGYGSVYKGKLIDGSN-VAVKVLNDSKGNGEEFINEVASIS--RTSHVN------V 383
KLG G + +V+ I G VA+KV+ ++ E ++E+ + R S N V
Sbjct: 44 KLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMV 103
Query: 384 VTLLG----FCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
V LL G +++E + + L+ I N L + +I + +G
Sbjct: 104 VQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQG-----LPLPCVKKIIQQVLQG 158
Query: 440 LEYLHLGCSTRILHFDIKPHNILL 463
L+YLH C RI+H DIKP NILL
Sbjct: 159 LDYLHTKC--RIIHTDIKPENILL 180
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 13/175 (7%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G G V I NVA+K L+ ++ + + E+ + +H N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 91
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
F ++ + EF + + + N + +L E + + + G+++LH S
Sbjct: 92 VFTPQKS--LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SA 146
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 147 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 198
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 13/175 (7%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G G V I NVA+K L+ ++ + + E+ + +H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 90
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
F ++ + EF + + + N + +L E + + + G+++LH S
Sbjct: 91 VFTPQKS--LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SA 145
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+KP NI++ D KI DFGLA+ + MT T Y APEV
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 343 YKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTS-HVNVVTLLGFCFEGRRRALIYE 401
Y K+ID + + + E + EV + + S H N++ L L+++
Sbjct: 32 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 91
Query: 402 FVSNGSLEKFIYRNSSSIENH-KLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHN 460
+ G L ++ + E + LL++ + + I+H D+KP N
Sbjct: 92 LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK----------LNIVHRDLKPEN 141
Query: 461 ILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
ILLD+D K++DFG + + E + + GT Y+APE+
Sbjct: 142 ILLDDDMNIKLTDFGFSCQLDPGEKLREVC---GTPSYLAPEII 182
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 29/200 (14%)
Query: 315 PRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID------GSNVAVKVLNDSKGNGEEF 368
P++Y+ D Y+L + G GK+++ G A+K+L DS +E
Sbjct: 2 PKKYAVTD--------DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEV 53
Query: 369 INEVASISRTSHVNVVTLLGFCFEGRR-RALIYEFVSNGSLEKFIYRNSSSIENHKLTWE 427
+ + V ++ + G+R +I E + G L I + T
Sbjct: 54 DHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERG----DQAFTER 109
Query: 428 TLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKE 484
+I I +++LH S I H D+KP N+L ++D K++DFG AK +
Sbjct: 110 EAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN- 165
Query: 485 SIISMTGARGTVGYIAPEVF 504
++ T Y+APEV
Sbjct: 166 ---ALQTPCYTPYYVAPEVL 182
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 343 YKGKLIDGSNVAVKVLNDSKGNGEEFINEVASISRTS-HVNVVTLLGFCFEGRRRALIYE 401
Y K+ID + + + E + EV + + S H N++ L L+++
Sbjct: 45 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 104
Query: 402 FVSNGSLEKFIYRNSSSIENH-KLTWETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHN 460
+ G L ++ + E + LL++ + + I+H D+KP N
Sbjct: 105 LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK----------LNIVHRDLKPEN 154
Query: 461 ILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
ILLD+D K++DFG + + E + + GT Y+APE+
Sbjct: 155 ILLDDDMNIKLTDFGFSCQLDPGEKLREVC---GTPSYLAPEII 195
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 29/200 (14%)
Query: 315 PRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID------GSNVAVKVLNDSKGNGEEF 368
P++Y+ D Y+L + G GK+++ G A+K+L DS +E
Sbjct: 21 PKKYAVTD--------DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEV 72
Query: 369 INEVASISRTSHVNVVTLLGFCFEGRR-RALIYEFVSNGSLEKFIYRNSSSIENHKLTWE 427
+ + V ++ + G+R +I E + G L I + T
Sbjct: 73 DHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERG----DQAFTER 128
Query: 428 TLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILL---DEDFCPKISDFGLAKICNRKE 484
+I I +++LH S I H D+KP N+L ++D K++DFG AK +
Sbjct: 129 EAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN- 184
Query: 485 SIISMTGARGTVGYIAPEVF 504
++ T Y+APEV
Sbjct: 185 ---ALQTPCYTPYYVAPEVL 201
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 13/83 (15%)
Query: 430 LQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKE----- 484
L I + IA +E+LH S ++H D+KP NI D K+ DFGL ++ E
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 485 -----SIISMTGARGTVGYIAPE 502
+ + G GT Y++PE
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPE 246
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 334 LGQGGYGSVYKGK-LIDGSNVAVK--VLNDSKGNGEEFINEVASISRTSHVNVV 384
+G+GG+G V++ K +D N A+K L + + E+ + EV ++++ H +V
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 23/181 (12%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLNDS----KGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G V+ + + A+K L + E + E +S +T +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 389 FCFEGRRRAL-IYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F+ + + E+++ G L +Y S HK A I GL++LH
Sbjct: 85 CTFQTKENLFFVMEYLNGGDL---MYHIQSC---HKFDLSRATFYAAEIILGLQFLH--- 135
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR---GTVGYIAPEVF 504
S I++ D+K NILLD+D KI+DFG+ KE+++ GT YIAPE+
Sbjct: 136 SKGIVYRDLKLDNILLDKDGHIKIADFGMC-----KENMLGDAKTNXFCGTPDYIAPEIL 190
Query: 505 C 505
Sbjct: 191 L 191
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 82/165 (49%), Gaps = 17/165 (10%)
Query: 329 SFKYKLGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVV 384
++ +G G YG V + ++ VA+K + + + + + E+A ++R +H +VV
Sbjct: 56 EIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVV 115
Query: 385 TLLGFCF----EGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
+L E + +++ +K ++R + +L +TLL + G+
Sbjct: 116 KVLDIVIPKDVEKFDELYVVLEIADSDFKK-LFRTPVYLT--ELHIKTLL---YNLLVGV 169
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKES 485
+Y+H S ILH D+KP N L+++D K+ DFGLA+ + E+
Sbjct: 170 KYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPEN 211
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 13/175 (7%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G G V I NVA+K L+ ++ + + E+ + +H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 90
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
F ++ + EF + + + N + +L E + + + G+++LH S
Sbjct: 91 VFTPQKS--LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SA 145
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+KP NI++ D KI DFGLA+ + M T Y APEV
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMEPEVVTRYYRAPEVI 197
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 23/181 (12%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLNDS----KGNGEEFINEVASISRTSHVNVVTLLG 388
LG+G +G V+ + + A+K L + E + E +S +T +
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 85
Query: 389 FCFEGRRRAL-IYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGC 447
F+ + + E+++ G L +Y S HK A I GL++LH
Sbjct: 86 CTFQTKENLFFVMEYLNGGDL---MYHIQSC---HKFDLSRATFYAAEIILGLQFLH--- 136
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR---GTVGYIAPEVF 504
S I++ D+K NILLD+D KI+DFG+ KE+++ GT YIAPE+
Sbjct: 137 SKGIVYRDLKLDNILLDKDGHIKIADFGMC-----KENMLGDAKTNEFCGTPDYIAPEIL 191
Query: 505 C 505
Sbjct: 192 L 192
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 29/197 (14%)
Query: 322 DIKKMTNSFKYKL----GQGGYGSVYKGKLIDGSN--VAVKVLNDSKGNGEEFINEVASI 375
D+ M +S +Y+L G G +G V + SN VAVK + + E E+ +
Sbjct: 11 DLPIMHDSDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKIDENVKREIINH 69
Query: 376 SRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIAV 434
H N+V A++ E+ S G L E+ S + + ++ L+
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS--- 126
Query: 435 GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP--KISDFGLAK---ICNRKESIISM 489
G+ Y H + ++ H D+K N LLD P KI FG +K + ++ +S +
Sbjct: 127 ----GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV-- 177
Query: 490 TGARGTVGYIAPEVFCR 506
GT YIAPEV +
Sbjct: 178 ----GTPAYIAPEVLLK 190
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 24/194 (12%)
Query: 322 DIKKMTN-SFKYKLGQGGYGSVYKGKLIDGSNV-AVKVLND----SKGNGEEFINEVASI 375
D K+T+ +F LG+G +G V + A+K+L + E + E +
Sbjct: 14 DRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVL 73
Query: 376 SRTSHVNVVTLLGFCFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAV 434
+ +T L CF+ R + E+V+ G L I + E + + A
Sbjct: 74 ALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFY------AA 127
Query: 435 GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGAR- 493
I+ GL +LH I++ D+K N++LD + KI+DFG+ KE ++ R
Sbjct: 128 EISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMC-----KEHMMDGVTTRE 179
Query: 494 --GTVGYIAPEVFC 505
GT YIAPE+
Sbjct: 180 FCGTPDYIAPEIIA 193
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 13/175 (7%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G G V I NVA+K L+ ++ + + E+ + +H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 90
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
F ++ + EF + + + N + +L E + + + G+++LH S
Sbjct: 91 VFTPQKS--LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SA 145
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+KP NI++ D KI DFGLA+ + M T Y APEV
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMEPEVVTRYYRAPEVI 197
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 13/175 (7%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G G G V I NVA+K L+ ++ + + E+ + +H N++ LL
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN- 92
Query: 390 CFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCST 449
F ++ + EF + + + N + +L E + + + G+++LH S
Sbjct: 93 VFTPQKS--LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SA 147
Query: 450 RILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
I+H D+KP NI++ D KI DFGLA+ ++ R Y APEV
Sbjct: 148 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTR---YYRAPEVI 199
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 29/197 (14%)
Query: 322 DIKKMTNSFKYKL----GQGGYGSVYKGKLIDGSN--VAVKVLNDSKGNGEEFINEVASI 375
D+ M +S +Y+L G G +G V + SN VAVK + + E E+ +
Sbjct: 11 DLPIMHDSDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKIDENVKREIINH 69
Query: 376 SRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSL-EKFIYRNSSSIENHKLTWETLLQIAV 434
H N+V A++ E+ S G L E+ S + + ++ L+
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS--- 126
Query: 435 GIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP--KISDFGLAKICNRKESIISMTGA 492
G+ Y H + ++ H D+K N LLD P KI FG +K S + +
Sbjct: 127 ----GVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK------SSVLHSQP 173
Query: 493 RGTVG---YIAPEVFCR 506
+ TVG YIAPEV +
Sbjct: 174 KDTVGTPAYIAPEVLLK 190
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 367 EFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
+ I E+ + + +V G + ++ E + GSL++ + + ++
Sbjct: 112 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG------RIPE 165
Query: 427 ETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 486
+ L ++++ + +GL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 166 QILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLI 218
Query: 487 ISMTGA-RGTVGYIAPE 502
SM + GT Y++PE
Sbjct: 219 DSMANSFVGTRSYMSPE 235
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 329 SFKYKLGQGGYGSVYKGKLIDGS-NVAVKVLN---DSKGNGEEFINEVASISRTSHVNVV 384
K+ +G+G YG VY + + NVA+K +N + + + + E+ ++R ++
Sbjct: 31 EIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYII 90
Query: 385 TLLGFCFEGR----RRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGL 440
L I +++ L+K E H T I + G
Sbjct: 91 RLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKT------ILYNLLLGE 144
Query: 441 EYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 486
+++H + I+H D+KP N LL++D KI DFGLA+ N + I
Sbjct: 145 KFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDI 187
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 367 EFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
+ I E+ + + +V G + ++ E + GSL++ + + ++
Sbjct: 77 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG------RIPE 130
Query: 427 ETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 486
+ L ++++ + +GL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 131 QILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLI 183
Query: 487 ISMTGA-RGTVGYIAPE 502
SM + GT Y++PE
Sbjct: 184 DSMANSFVGTRSYMSPE 200
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 367 EFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
+ I E+ + + +V G + ++ E + GSL++ + + ++
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG------RIPE 103
Query: 427 ETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 486
+ L ++++ + +GL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 104 QILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLI 156
Query: 487 ISMTGA-RGTVGYIAPE 502
SM + GT Y++PE
Sbjct: 157 DSMANSFVGTRSYMSPE 173
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 367 EFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
+ I E+ + + +V G + ++ E + GSL++ + + ++
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG------RIPE 103
Query: 427 ETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 486
+ L ++++ + +GL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 104 QILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLI 156
Query: 487 ISMTGA-RGTVGYIAPE 502
SM + GT Y++PE
Sbjct: 157 DSMANSFVGTRSYMSPE 173
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 367 EFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
+ I E+ + + +V G + ++ E + GSL++ + + ++
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG------RIPE 103
Query: 427 ETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 486
+ L ++++ + +GL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 104 QILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLI 156
Query: 487 ISMTGA-RGTVGYIAPE 502
SM + GT Y++PE
Sbjct: 157 DSMANSFVGTRSYMSPE 173
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 367 EFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
+ I E+ + + +V G + ++ E + GSL++ + + ++
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG------RIPE 103
Query: 427 ETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 486
+ L ++++ + +GL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 104 QILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLI 156
Query: 487 ISMTGA-RGTVGYIAPE 502
SM + GT Y++PE
Sbjct: 157 DSMANSFVGTRSYMSPE 173
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLND---SKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G+G +G V KL + V A+K+LN K E + +T L +
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 390 CFEGRRRA-LIYEFVSNGSLEKFIYRNSSSI-ENHKLTWETLLQIAVGIARGLEYLHLGC 447
F+ L+ ++ G L + + + E + + IA+ L Y+H
Sbjct: 142 AFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHR-- 199
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
DIKP NIL+D + +++DFG + + ++ + + A GT YI+PE+
Sbjct: 200 -------DIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEIL 248
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 367 EFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
+ I E+ + + +V G + ++ E + GSL++ + + ++
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG------RIPE 103
Query: 427 ETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 486
+ L ++++ + +GL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 104 QILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLI 156
Query: 487 ISMTGA-RGTVGYIAPE 502
SM + GT Y++PE
Sbjct: 157 DSMANSFVGTRSYMSPE 173
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 333 KLGQGGYGSVYK-GKLIDGSNVAVKVLNDS-KGNGEE--FINEV-ASISRTSHVNVVTLL 387
K+G G +GSV+K K +DG A+K G+ +E + EV A H +VV
Sbjct: 16 KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 75
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFI---YRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
E + E+ + GSL I YR S + +L + LLQ+ RGL Y+H
Sbjct: 76 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLLQVG----RGLRYIH 130
Query: 445 LGCSTRILHFDIKPHNILLDEDFCP 469
S ++H DIKP NI + P
Sbjct: 131 ---SMSLVHMDIKPSNIFISRTSIP 152
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 333 KLGQGGYGSVYK-GKLIDGSNVAVKVLNDS-KGNGEE--FINEV-ASISRTSHVNVVTLL 387
K+G G +GSV+K K +DG A+K G+ +E + EV A H +VV
Sbjct: 18 KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 77
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFI---YRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
E + E+ + GSL I YR S + +L + LLQ+ RGL Y+H
Sbjct: 78 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLLQVG----RGLRYIH 132
Query: 445 LGCSTRILHFDIKPHNILLDEDFCP 469
S ++H DIKP NI + P
Sbjct: 133 ---SMSLVHMDIKPSNIFISRTSIP 154
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 333 KLGQGGYGSVYK-GKLIDGSNVAVKVLNDS-KGNGEE--FINEV-ASISRTSHVNVVTLL 387
K+G G +GSV+K K +DG A+K G+ +E + EV A H +VV
Sbjct: 16 KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 75
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFI---YRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
E + E+ + GSL I YR S + +L + LLQ+ RGL Y+H
Sbjct: 76 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLLQVG----RGLRYIH 130
Query: 445 LGCSTRILHFDIKPHNILLDEDFCP 469
S ++H DIKP NI + P
Sbjct: 131 ---SMSLVHMDIKPSNIFISRTSIP 152
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 333 KLGQGGYGSVYK-GKLIDGSNVAVKVLNDS-KGNGEE--FINEV-ASISRTSHVNVVTLL 387
K+G G +GSV+K K +DG A+K G+ +E + EV A H +VV
Sbjct: 14 KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 73
Query: 388 GFCFEGRRRALIYEFVSNGSLEKFI---YRNSSSIENHKLTWETLLQIAVGIARGLEYLH 444
E + E+ + GSL I YR S + +L + LLQ+ RGL Y+H
Sbjct: 74 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK-DLLLQVG----RGLRYIH 128
Query: 445 LGCSTRILHFDIKPHNILLDEDFCP 469
S ++H DIKP NI + P
Sbjct: 129 ---SMSLVHMDIKPSNIFISRTSIP 150
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 367 EFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
+ I E+ + + +V G + ++ E + GSL++ + + ++
Sbjct: 69 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG------RIPE 122
Query: 427 ETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 486
+ L ++++ + +GL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 123 QILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLI 175
Query: 487 ISMTGA-RGTVGYIAPE 502
SM + GT Y++PE
Sbjct: 176 DSMANSFVGTRSYMSPE 192
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 40/198 (20%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVN--------- 382
KLG G + +V+ K +++ ++VA+K++ K E +E+ + R + +
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 85
Query: 383 --VVTLLGFCFE----GRRRALIYEFVSNGSL---EKFIYRNSSSIENHKLTWETLLQIA 433
++ LL G +++E + L +K+ +R I +++ + LL
Sbjct: 86 NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLL--- 142
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP------KISDFGLAKICNRKESII 487
GL+Y+H C I+H DIKP N+L++ P KI+D G A C E
Sbjct: 143 -----GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDE--- 190
Query: 488 SMTGARGTVGYIAPEVFC 505
T + T Y +PEV
Sbjct: 191 HYTNSIQTREYRSPEVLL 208
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 40/198 (20%)
Query: 333 KLGQGGYGSVYKGK-LIDGSNVAVKVLNDSKGNGEEFINEVASISRTSHVN--------- 382
KLG G + +V+ K +++ ++VA+K++ K E +E+ + R + +
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 85
Query: 383 --VVTLLGF----CFEGRRRALIYEFVSNGSL---EKFIYRNSSSIENHKLTWETLLQIA 433
++ LL G +++E + L +K+ +R I +++ + LL
Sbjct: 86 NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLL--- 142
Query: 434 VGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCP------KISDFGLAKICNRKESII 487
GL+Y+H C I+H DIKP N+L++ P KI+D G A C E
Sbjct: 143 -----GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDE--- 190
Query: 488 SMTGARGTVGYIAPEVFC 505
T + T Y +PEV
Sbjct: 191 HYTNSIQTREYRSPEVLL 208
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 334 LGQGGYGSVYKGKLI-DGSNVAVK-VLNDSKGNGEEFINEVASISRTS-HVNVVTLLGFC 390
L +GG+ VY+ + + G A+K +L++ + I EV + + S H N+V
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 391 FEGRRRA-------LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYL 443
G+ + L+ + G L +F+ + S L+ +T+L+I R ++++
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMES---RGPLSCDTVLKIFYQTCRAVQHM 152
Query: 444 HLGCSTRILHFDIKPHNILLDEDFCPKISDFGLA 477
H I+H D+K N+LL K+ DFG A
Sbjct: 153 HRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 350 GSNVAVKVLNDSK-----GNGEEFINEVASISRT-SHVNVVTLLGFCFEGRRRALIYEFV 403
G AVK+++ +K G E + ASI H ++V LL +++EF+
Sbjct: 49 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108
Query: 404 SNGSL---------EKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHF 454
L F+Y S ++ +H + I L Y H I+H
Sbjct: 109 DGADLCFEIVKRADAGFVY--SEAVASHYMRQ---------ILEALRYCH---DNNIIHR 154
Query: 455 DIKPHNILL--DEDFCP-KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
D+KPH +LL E+ P K+ FG+A ES + G GT ++APEV R
Sbjct: 155 DVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPHFMAPEVVKRE 208
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 350 GSNVAVKVLNDSK-----GNGEEFINEVASISRT-SHVNVVTLLGFCFEGRRRALIYEFV 403
G AVK+++ +K G E + ASI H ++V LL +++EF+
Sbjct: 51 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 110
Query: 404 SNGSL---------EKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTRILHF 454
L F+Y S ++ +H + I L Y H I+H
Sbjct: 111 DGADLCFEIVKRADAGFVY--SEAVASHYMRQ---------ILEALRYCH---DNNIIHR 156
Query: 455 DIKPHNILL--DEDFCP-KISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRN 507
D+KPH +LL E+ P K+ FG+A ES + G GT ++APEV R
Sbjct: 157 DVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPHFMAPEVVKRE 210
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 330 FKYKLGQGGYGSVYKGKLIDGS-NVAVKVLN---DSKGNGEEFINEVASISRTSHVNVVT 385
K+ +G+G YG VY + NVA+K +N + + + + E+ ++R ++
Sbjct: 30 IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIR 89
Query: 386 LLGFCFEGR----RRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
L I +++ L+K + I LT E + I + G
Sbjct: 90 LYDLIIPDDLLKFDELYIVLEIADSDLKKLF---KTPIF---LTEEHIKTILYNLLLGEN 143
Query: 442 YLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKES 485
++H + I+H D+KP N LL++D K+ DFGLA+ N ++
Sbjct: 144 FIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKD 184
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 17/83 (20%)
Query: 429 LLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFC---PKISDFGLAK----ICN 481
++++ I G+ YLH I+H D+KP NILL + KI DFG+++ C
Sbjct: 133 VIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE 189
Query: 482 RKESIISMTGARGTVGYIAPEVF 504
+E + GT Y+APE+
Sbjct: 190 LREIM-------GTPEYLAPEIL 205
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N+V LL + + +LI+E+V+N K +Y + + +E L +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELL--------KA 137
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N+V LL + + +LI+E+V+N K +Y + + +E L +
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELL--------KA 138
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 139 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 175
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N+V LL + + +LI+E+V+N K +Y + + +E L +
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELL--------KA 138
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 139 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 175
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N+V LL + + +LI+E+V+N K +Y + + +E L +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELL--------KA 137
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N+V LL + + +LI+E+V+N K +Y + + +E L +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELL--------KA 137
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N+V LL + + +LI+E+V+N K +Y + + +E L +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELL--------KA 137
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N+V LL + + +LI+E+V+N K +Y + + +E L +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELL--------KA 137
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N+V LL + + +LI+E+V+N K +Y + + +E L +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELL--------KA 137
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 138 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 174
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N+V LL + + +LI+E+V+N K +Y + + +E L +
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELL--------KA 158
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 159 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 195
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 367 EFINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTW 426
+ I E+ + + +V G + ++ E + GSL++ + + ++
Sbjct: 53 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG------RIPE 106
Query: 427 ETLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESI 486
+ L ++++ + +GL YL +I+H D+KP NIL++ K+ DFG++ + I
Sbjct: 107 QILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLI 159
Query: 487 ISMTGA-RGTVGYIAPE 502
M GT Y++PE
Sbjct: 160 DEMANEFVGTRSYMSPE 176
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFEGRRR--ALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N+V LL + + +LI+E+V+N K +Y + + +E L +
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDIRYYIYELL--------KA 139
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 140 LDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE 176
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 436 IARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGT 495
+ L+ +H S ++H D+KP N+LLD+ K++DFG + + ++ A GT
Sbjct: 183 VVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD-ETGMVHCDTAVGT 238
Query: 496 VGYIAPEVFCRNIGEVSY 513
YI+PEV G+ Y
Sbjct: 239 PDYISPEVLKSQGGDGYY 256
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 312 SLAPRRYSYADIKKMTNSFKYKLGQGGYGSVYKGKLID-GSNVAVKVLNDSKGNGEE--- 367
++ +RY A+I + N + +G G G V+K + G +AVK + S GN EE
Sbjct: 14 TIGGQRYQ-AEINDLENLGE--MGSGTCGQVWKMRFRKTGHVIAVKQMRRS-GNKEENKR 69
Query: 368 FINEVASISRTSHVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWE 427
+ ++ + ++ + F I + EK R I
Sbjct: 70 ILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPER----- 124
Query: 428 TLLQIAVGIARGLEYLHLGCSTRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESII 487
L ++ V I + L YL ++H D+KP NILLDE K+ DFG I R
Sbjct: 125 ILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFG---ISGRLVDDK 179
Query: 488 SMTGARGTVGYIAPE 502
+ + G Y+APE
Sbjct: 180 AKDRSAGCAAYMAPE 194
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLND---SKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G+G +G V K+ + + A+K+LN K E + +T L +
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 141
Query: 390 CFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG-IARGLEYLHLGC 447
F+ L+ ++ G L + + + E + + +G + ++ +H
Sbjct: 142 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP------EDMARFYIGEMVLAIDSIH--- 192
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
+H DIKP N+LLD + +++DFG N ++ S + A GT YI+PE+
Sbjct: 193 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQS-SVAVGTPDYISPEIL 248
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 16/177 (9%)
Query: 334 LGQGGYGSVYKGKLIDGSNV-AVKVLND---SKGNGEEFINEVASISRTSHVNVVTLLGF 389
+G+G +G V K+ + + A+K+LN K E + +T L +
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 157
Query: 390 CFEGRRRA-LIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVG-IARGLEYLHLGC 447
F+ L+ ++ G L + + + E + + +G + ++ +H
Sbjct: 158 AFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP------EDMARFYIGEMVLAIDSIH--- 208
Query: 448 STRILHFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVF 504
+H DIKP N+LLD + +++DFG N ++ S + A GT YI+PE+
Sbjct: 209 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQS-SVAVGTPDYISPEIL 264
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 334 LGQGGYGSVYKG-KLIDGSNVAVKVLNDSKGNGEEFI-NEVASISR-TSHVNVVTLLGFC 390
LG+G + V LI AVK++ G+ + EV + + H NV+ L+ F
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 391 FEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLEYLHLGCSTR 450
E R L++E + GS+ I++ ++L ++Q +A L++LH +
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIHKRR---HFNELEASVVVQ---DVASALDFLH---NKG 131
Query: 451 ILHFDIKPHNILLDE--DFCP-KISDFGLAK--ICNRKESIIS---MTGARGTVGYIAPE 502
I H D+KP NIL + P KI DFGL N S IS + G+ Y+APE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 503 V 503
V
Sbjct: 192 V 192
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFE--GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N++TL + R AL++E V+N ++ +Y+ + + +E L +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFYMYEIL--------KA 143
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+L+D + ++ D+GLA+
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAE 180
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 24/186 (12%)
Query: 330 FKYKLGQGGYGSVYKGKLIDGS-NVAVKVLND---SKGNGEEFINEVASISRTSHVNVVT 385
F ++G+G + +VYKG + + VA L D +K + F E + H N+V
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVR 89
Query: 386 LLG---FCFEGRR-RALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARGLE 441
+G++ L+ E ++G+L+ ++ R +W I +GL+
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW------CRQILKGLQ 143
Query: 442 YLHLGCSTRILHFDIKPHNILLD-EDFCPKISDFGLA--KICNRKESIISMTGARGTVGY 498
+LH I+H D+K NI + KI D GLA K + +++I GT +
Sbjct: 144 FLHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI------GTPEF 196
Query: 499 IAPEVF 504
APE +
Sbjct: 197 XAPEXY 202
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 453 HFDIKPHNILLDEDFCPKISDFGLAKICNRKESIISMTGARGTVGYIAPEVFCRNIGEVS 512
H D+KP NIL+ D + DFG+A E + + GT+ Y APE F + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATT-DEKLTQLGNTVGTLYYXAPERFSES--HAT 213
Query: 513 YKSD 516
Y++D
Sbjct: 214 YRAD 217
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFE--GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N++TL + R AL++E V+N ++ +Y+ + + +E L +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFYMYEIL--------KA 143
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 325 KMTNSFKY--KLGQGGYGSVYKGKLID-GSNVAVKVLNDSKGNGEEFINEVASISR--TS 379
++ N F+ K+G G +G +Y G I VA+K L + K + + E + I R
Sbjct: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LENVKTKHPQLLYE-SKIYRILQG 61
Query: 380 HVNVVTLLGFCFEGRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
+ + F EG L+ + + SLE + + KL+ +T+L +A +
Sbjct: 62 GTGIPNVRWFGVEGDYNVLVMDLLGP-SLEDLF-----NFCSRKLSLKTVLMLADQMINR 115
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCPK---ISDFGLAK 478
+E++H S LH DIKP N L+ I DFGLAK
Sbjct: 116 VEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFE--GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N++TL + R AL++E V+N ++ +Y+ + + +E L +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFYMYEIL--------KA 143
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFE--GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N++TL + R AL++E V+N ++ +Y+ + + +E L +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFYMYEIL--------KA 143
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFE--GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N++TL + R AL++E V+N ++ +Y+ + + +E L +
Sbjct: 98 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFYMYEIL--------KA 148
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 149 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 185
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFE--GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N++TL + R AL++E V+N ++ +Y+ + + +E L +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFYMYEIL--------KA 143
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFE--GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N++TL + R AL++E V+N ++ +Y+ + + +E L +
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFYMYEIL--------KA 142
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 143 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFE--GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N++TL + R AL++E V+N ++ +Y+ + + +E L +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFYMYEIL--------KA 143
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFE--GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N++TL + R AL++E V+N ++ +Y+ + + +E L +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFYMYEIL--------KA 143
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFE--GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N++TL + R AL++E V+N ++ +Y+ + + +E L +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFYMYEIL--------KA 143
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Query: 382 NVVTLLGFCFE--GRRRALIYEFVSNGSLEKFIYRNSSSIENHKLTWETLLQIAVGIARG 439
N++TL + R AL++E V+N ++ +Y+ + + +E L +
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDIRFYMYEIL--------KA 142
Query: 440 LEYLHLGCSTRILHFDIKPHNILLDEDFCP-KISDFGLAK 478
L+Y H S I+H D+KPHN+++D + ++ D+GLA+
Sbjct: 143 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,668,605
Number of Sequences: 62578
Number of extensions: 595072
Number of successful extensions: 3252
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 260
Number of HSP's that attempted gapping in prelim test: 1453
Number of HSP's gapped (non-prelim): 1108
length of query: 516
length of database: 14,973,337
effective HSP length: 103
effective length of query: 413
effective length of database: 8,527,803
effective search space: 3521982639
effective search space used: 3521982639
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 54 (25.4 bits)