BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036482
(177 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26
OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
Length = 153
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 19/122 (15%)
Query: 11 IIDMFGWRLG-KTQLPNAMAIVELMVHMDCEGCEKRIRRAISKIDVFNQFDVQFSFDFII 69
+ +MF G K + + VE+ V MDCEGCE+++RR++ +
Sbjct: 7 VSEMFDCSHGHKIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMK--------------- 51
Query: 70 TGVDSLDIDMDKQKVTVTGYVDERKVL-KVVRRTGRKAEFWPF-PYDSEYYPYASTYLDE 127
GV S+ ++ KVTV GYVD KV+ ++ RTG+K E WP+ PYD +PYA+ D+
Sbjct: 52 -GVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTGKKVELWPYVPYDVVAHPYAAGVYDK 110
Query: 128 ST 129
Sbjct: 111 KA 112
>sp|Q54PZ2|ATOX1_DICDI Copper transport protein ATOX1 homolog OS=Dictyostelium discoideum
GN=atox1 PE=3 SV=2
Length = 67
Score = 37.0 bits (84), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 17/77 (22%)
Query: 35 VHMDCEGCEKRIRRAISKIDVFNQFDVQFSFDFIITGVDSLDIDMDKQKVTV-TGYVDER 93
V M C GC K + +SKID GV ++ ID++ +KV+ + +
Sbjct: 7 VDMTCGGCSKAVNAILSKID----------------GVSNIQIDLENKKVSCESSKMGAD 50
Query: 94 KVLKVVRRTGRKAEFWP 110
++LK +++TG+K
Sbjct: 51 ELLKNIQKTGKKCSIIA 67
>sp|Q6L3Z7|R1B14_SOLDE Putative late blight resistance protein homolog R1B-14 OS=Solanum
demissum GN=R1B-14 PE=3 SV=1
Length = 1317
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 46 IRRAISKIDVFNQFDV----QFSFDFIITGVDSLDIDMDKQKVTVTGYVDERKVLKVVRR 101
I++ + K D++ D F + GV S+ DMD++KVTVTG +D +V VV +
Sbjct: 1251 IKKMVLKFDIYQNHDKGRLETFKKLVPLPGVKSVRFDMDEKKVTVTGVMDANEVQLVVSK 1310
Query: 102 TGRKA 106
++
Sbjct: 1311 LRKRG 1315
>sp|Q6L400|R1B16_SOLDE Putative late blight resistance protein homolog R1B-16 OS=Solanum
demissum GN=R1B-16 PE=3 SV=1
Length = 1284
Score = 35.0 bits (79), Expect = 0.28, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 23 QLPNAMAIVELMVHMDCEGCEKRIRRAISKIDVFNQFDVQ-FSFDFIITGVDSLDIDMDK 81
++P+ + + +++ E C + + ++ I D Q +F ++ G++S+ D +
Sbjct: 1198 EIPSCFMDIPSLKYIEVENCNESVVKSAMNIQETQVEDYQNTNFKLVLIGIESISTDTKE 1257
Query: 82 QKVTVTGYVDERKVLKVVRRTGRKA 106
+K+TVT VD +V VV + ++
Sbjct: 1258 KKLTVTRDVDADEVQLVVEKQRKRG 1282
>sp|Q9FDA3|VANM_VIBAN Acyl-homoserine-lactone synthase VanM OS=Vibrio anguillarum GN=vanM
PE=1 SV=1
Length = 400
Score = 34.7 bits (78), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 9/121 (7%)
Query: 47 RRAISKIDVFNQFDVQFSFDFI----ITGVDSLDIDMDKQKVTVTGYVDERKVLKVVRRT 102
+ A+SK D +FD QF + V L + + Q+ Y+ ++K+++++ +
Sbjct: 257 KPALSKCDSLPEFDHQFRRQLTGTQAVCEVLRLTVSGNAQQKLYFLYLAQKKLIQILNQM 316
Query: 103 GRKAEFWPF--PYDSEYYPYASTYLDESTFRSSYNYYQHGFNESVHGYFPDQAYETVPDD 160
G K F P+ +Y T +S FRS YN + +S G++ + + V D
Sbjct: 317 GYKIGFTIIEQPFILNFY---QTIEPKSYFRSGYNDLNNNGKQSYRGFWMIERMDKVFSD 373
Query: 161 T 161
T
Sbjct: 374 T 374
>sp|Q01014|HELI_SHV21 Probable ATP-dependent helicase 44 OS=Saimiriine herpesvirus 2
(strain 11) GN=44 PE=3 SV=1
Length = 781
Score = 33.9 bits (76), Expect = 0.51, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 81 KQKVTVTGYVDERKVLKVVRRTGRKAEFWPFPYDSEYYPYASTYLDESTFRSSYNYYQHG 140
K K V GYV K K + ++E + + ++ + ++L + S YN++ +G
Sbjct: 446 KTKKCVCGYVGTYKNFKKIL----ESESFIDSHANDQPEFVYSFLCTILYNSLYNFHNYG 501
Query: 141 FNESVHGYFPDQAYETVPDDTVHLFSEDNV 170
E Y D A +P++ HL+++ ++
Sbjct: 502 VTEKNESYLNDLANLKLPENLTHLYTQTDL 531
>sp|Q6BZU2|CCS1_YARLI Superoxide dismutase 1 copper chaperone OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=CCS1 PE=3 SV=1
Length = 234
Score = 33.1 bits (74), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 16/72 (22%)
Query: 35 VHMDCEGCEKRIRRAISKIDVFNQFDVQFSFDFIITGVDSLDIDMDKQKVTVTGYVDERK 94
V ++CE C +++A++ + G++S+D + Q ++VTG +
Sbjct: 9 VPLECESCCDSVKQALANVQ----------------GIESVDCKLVDQLISVTGTSAPSQ 52
Query: 95 VLKVVRRTGRKA 106
++K V+ G+ A
Sbjct: 53 IVKAVQNIGKDA 64
>sp|Q9XT28|ATOX1_SHEEP Copper transport protein ATOX1 OS=Ovis aries GN=ATOX1 PE=3 SV=1
Length = 68
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 17/78 (21%)
Query: 32 ELMVHMDCEGCEKRIRRAISKIDVFNQFDVQFSFDFIITGVDSLDIDMDKQKVTVTGYVD 91
E V M CEGC + R ++K+ VQF DID+ +KV +
Sbjct: 5 EFSVDMTCEGCSNAVTRVLNKLG-----GVQF------------DIDLPNKKVCINSEHS 47
Query: 92 ERKVLKVVRRTGRKAEFW 109
+L+ + +TG+ +
Sbjct: 48 VDTLLETLGKTGKAVSYL 65
>sp|Q3T0E0|ATOX1_BOVIN Copper transport protein ATOX1 OS=Bos taurus GN=ATOX1 PE=3 SV=1
Length = 68
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 17/78 (21%)
Query: 32 ELMVHMDCEGCEKRIRRAISKIDVFNQFDVQFSFDFIITGVDSLDIDMDKQKVTVTGYVD 91
E V M CEGC + R ++K+ VQF DID+ +KV +
Sbjct: 5 EFSVDMTCEGCSNAVTRVLNKLG-----GVQF------------DIDLPNKKVCINSEHS 47
Query: 92 ERKVLKVVRRTGRKAEFW 109
+L+ + +TG+ +
Sbjct: 48 VDTLLETLGKTGKAVSYL 65
>sp|Q6BK66|CCS1_DEBHA Superoxide dismutase 1 copper chaperone OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=CCS1 PE=3 SV=2
Length = 250
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 16/72 (22%)
Query: 35 VHMDCEGCEKRIRRAISKIDVFNQFDVQFSFDFIITGVDSLDIDMDKQKVTVTGYVDERK 94
V M+C+ C + ++ ++ G+ DID+ VT G V +
Sbjct: 11 VPMECQSCVDSVSSSLKSLN----------------GISKYDIDLKSNLVTTEGSVPPSE 54
Query: 95 VLKVVRRTGRKA 106
++K ++ TG+ A
Sbjct: 55 IVKAIQSTGKDA 66
>sp|Q043G6|ADDA_LACGA ATP-dependent helicase/nuclease subunit A OS=Lactobacillus gasseri
(strain ATCC 33323 / DSM 20243) GN=addA PE=3 SV=1
Length = 1204
Score = 31.6 bits (70), Expect = 2.5, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 52 KIDVFNQFDVQFSFDFIITGVDSLDIDMDKQKVTVTGYVDERKVLKVVRRTGRKAEFWPF 111
K+D+ +Q F+ F++ + + + +K+ T E+K+++ + R+ +
Sbjct: 305 KLDLNDQLKKIFASFFVVEEKEQIAVLQKSEKIVKTIVAAEKKLIQKFSQLKREQNLIDY 364
Query: 112 PYDSEYYPYASTYLDESTFRSSYNYYQHGFNE 143
D E + ++ D S + YYQ FNE
Sbjct: 365 S-DMEQFAFSILTTDTSNAHIAQEYYQEKFNE 395
>sp|Q6L440|R1A3_SOLDE Putative late blight resistance protein homolog R1A-3 OS=Solanum
demissum GN=R1A-3 PE=5 SV=2
Length = 775
Score = 31.6 bits (70), Expect = 3.1, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 46 IRRAISKIDVFNQFDVQFSFDFI--ITGVDSLDIDMDKQKVTVTGYVDERKVLKVV 99
I++ I + D+ + ++ +F + + GVDS+ IDM ++K+TV G ++ +V VV
Sbjct: 711 IKKMILQFDISHDKEIDNAFKRLASLPGVDSISIDMIEKKLTVGGDMNANEVRLVV 766
>sp|A6GY76|HIS4_FLAPJ 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Flavobacterium
psychrophilum (strain JIP02/86 / ATCC 49511) GN=hisA
PE=3 SV=1
Length = 241
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Query: 49 AISKIDVFNQFDVQFSFDFIITGVDSLDIDMDKQKVTVTGYVDERK 94
A+ +VFN++ +++ D II G D+ + +KV ++G+++E K
Sbjct: 106 AVKNPEVFNEWIIKYGADKIILGADA-----NNEKVAISGWLEESK 146
>sp|Q9TT99|ATOX1_CANFA Copper transport protein ATOX1 OS=Canis familiaris GN=ATOX1 PE=3
SV=1
Length = 68
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 17/78 (21%)
Query: 32 ELMVHMDCEGCEKRIRRAISKIDVFNQFDVQFSFDFIITGVDSLDIDMDKQKVTVTGYVD 91
E V M CEGC + R ++K+ V+F DID+ +KV +
Sbjct: 5 EFSVDMTCEGCSNAVSRVLNKLG-----GVEF------------DIDLPNKKVCINSEHS 47
Query: 92 ERKVLKVVRRTGRKAEFW 109
+L+ + +TG+ +
Sbjct: 48 VDILLETLEKTGKAVSYL 65
>sp|P31755|OCH1_YEAST Initiation-specific alpha-1,6-mannosyltransferase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=OCH1 PE=1
SV=1
Length = 480
Score = 30.4 bits (67), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 18/121 (14%)
Query: 63 FSFDFIITGVDSLDIDMDKQKVTVTGYVDERKVLKVVRRTGRKAEFWPFPYDSE------ 116
F + T S DI++ KQ +TV ++ L R + FPYDS+
Sbjct: 48 FKQTLLPTTSHSQDINLKKQ-ITVNKKKNQLHNL-------RDQLSFAFPYDSQAPIPQR 99
Query: 117 YYPYASTYLDESTFRSSYNYYQHGFNESVHGYFPDQAYETVPDDTVHLFSEDNVHAYCTI 176
+ D+ F SS+ YQ ++ S Y PD Y + DD++ F E N++A I
Sbjct: 100 VWQTWKVGADDKNFPSSFRTYQKTWSGS---YSPDYQYSLISDDSIIPFLE-NLYAPVPI 155
Query: 177 M 177
+
Sbjct: 156 V 156
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.450
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,617,644
Number of Sequences: 539616
Number of extensions: 2754996
Number of successful extensions: 8682
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 8662
Number of HSP's gapped (non-prelim): 31
length of query: 177
length of database: 191,569,459
effective HSP length: 110
effective length of query: 67
effective length of database: 132,211,699
effective search space: 8858183833
effective search space used: 8858183833
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)