Query 036490
Match_columns 557
No_of_seqs 160 out of 1527
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 03:36:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036490.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036490hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ko1_A Chaperonin; 9-fold symm 100.0 1E-114 4E-119 938.2 50.1 526 2-531 13-538 (553)
2 1a6d_B Thermosome (beta subuni 100.0 7E-114 2E-118 933.9 53.7 524 2-530 4-527 (543)
3 1q3q_A Thermosome alpha subuni 100.0 2E-113 7E-118 930.2 56.6 525 1-530 5-529 (548)
4 3ruv_A Chaperonin, CPN; double 100.0 4E-113 1E-117 927.1 57.4 520 3-531 4-524 (543)
5 3iyg_A T-complex protein 1 sub 100.0 1E-112 5E-117 920.7 60.9 512 12-526 3-528 (529)
6 3iyg_G T-complex protein 1 sub 100.0 2E-112 7E-117 917.0 60.5 512 12-525 2-513 (515)
7 3p9d_G T-complex protein 1 sub 100.0 7E-114 2E-118 933.2 43.8 525 1-534 6-535 (550)
8 1a6d_A Thermosome (alpha subun 100.0 1E-112 4E-117 923.4 51.8 519 4-529 7-525 (545)
9 3iyg_H T-complex protein 1 sub 100.0 2E-111 5E-116 908.9 59.1 507 9-525 1-513 (515)
10 3p9d_A T-complex protein 1 sub 100.0 9E-112 3E-116 918.3 53.6 519 8-530 13-552 (559)
11 3iyg_B T-complex protein 1 sub 100.0 7E-111 2E-115 904.5 59.9 505 11-527 2-512 (513)
12 3p9d_C T-complex protein 1 sub 100.0 2E-112 6E-117 923.5 45.1 526 1-528 1-588 (590)
13 3iyg_D T-complex protein 1 sub 100.0 5E-110 2E-114 898.9 58.0 507 12-525 4-517 (518)
14 3iyg_E T-complex protein 1 sub 100.0 2E-109 5E-114 895.2 60.5 508 12-525 3-514 (515)
15 3iyg_Z T-complex protein 1 sub 100.0 8E-110 3E-114 896.2 56.2 503 13-525 4-516 (517)
16 3p9d_E T-complex protein 1 sub 100.0 3E-110 1E-114 907.0 51.2 521 2-528 26-560 (562)
17 3p9d_D T-complex protein 1 sub 100.0 5E-111 2E-115 907.6 43.5 513 7-525 7-527 (528)
18 3p9d_H T-complex protein 1 sub 100.0 1E-110 3E-115 911.6 39.3 519 5-529 11-551 (568)
19 3p9d_F T-complex protein 1 sub 100.0 7E-110 2E-114 902.9 40.1 517 4-527 2-538 (546)
20 3iyg_Q T-complex protein 1 sub 100.0 3E-107 1E-111 877.1 59.7 505 10-525 1-511 (512)
21 3p9d_B T-complex protein 1 sub 100.0 1E-109 4E-114 898.8 37.3 515 4-530 2-522 (527)
22 3aq1_B Thermosome subunit; gro 100.0 6E-103 2E-107 840.5 42.3 481 47-531 1-481 (500)
23 1we3_A CPN60(groel); chaperoni 100.0 1.5E-94 5.1E-99 779.0 45.1 462 14-529 5-528 (543)
24 1kp8_A Groel protein; chaperon 100.0 4.3E-94 1.5E-98 774.0 42.4 461 14-530 5-527 (547)
25 1iok_A Chaperonin 60; chaperon 100.0 5.8E-95 2E-99 781.5 31.7 463 14-531 6-530 (545)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 4.7E-94 1.6E-98 771.5 33.1 461 14-531 5-526 (546)
27 1gml_A T-complex protein 1 sub 100.0 2.5E-36 8.6E-41 279.6 18.6 174 208-382 1-174 (178)
28 1ass_A Thermosome; chaperonin, 100.0 5.8E-32 2E-36 245.3 13.3 154 214-369 1-154 (159)
29 3m6c_A 60 kDa chaperonin 1; ch 99.3 3.3E-11 1.1E-15 109.0 12.0 145 211-396 2-169 (194)
30 3osx_A 60 kDa chaperonin; alph 99.2 1.7E-10 5.8E-15 104.6 13.5 141 215-396 13-176 (201)
31 1srv_A Protein (groel (HSP60 c 99.2 6.6E-11 2.2E-15 102.1 9.2 113 216-353 1-135 (145)
32 1o13_A Probable NIFB protein; 55.8 29 0.00099 29.3 6.9 52 278-330 68-119 (136)
33 2yx6_A Hypothetical protein PH 53.1 36 0.0012 27.8 7.0 53 277-330 54-106 (121)
34 1eo1_A Hypothetical protein MT 50.0 42 0.0014 27.6 7.0 51 279-330 58-108 (124)
35 2wfb_A Putative uncharacterize 47.9 41 0.0014 27.5 6.5 51 278-329 59-110 (120)
36 2re2_A Uncharacterized protein 41.4 60 0.002 27.3 6.6 51 278-330 71-121 (136)
37 1rdu_A Conserved hypothetical 34.8 43 0.0015 27.1 4.5 50 280-330 56-105 (116)
38 2qtd_A Uncharacterized protein 29.1 1.4E+02 0.0047 23.5 6.6 48 280-329 50-97 (105)
39 3psh_A Protein HI_1472; substr 23.7 1.2E+02 0.0043 29.0 6.5 34 280-313 78-111 (326)
40 3ff4_A Uncharacterized protein 21.1 1.4E+02 0.0047 24.5 5.2 39 277-315 73-112 (122)
41 3v7q_A Probable ribosomal prot 21.0 2.2E+02 0.0076 22.3 6.3 51 277-330 26-80 (101)
42 2q8p_A Iron-regulated surface 21.0 1.1E+02 0.0037 28.3 5.2 50 280-329 54-109 (260)
43 2xzm_U Ribosomal protein L7AE 20.7 2.3E+02 0.0078 23.4 6.5 50 277-329 31-85 (126)
44 2r79_A Periplasmic binding pro 20.7 2.1E+02 0.0072 26.7 7.3 50 280-329 53-110 (283)
45 2lbw_A H/ACA ribonucleoprotein 20.3 2.5E+02 0.0085 22.8 6.7 50 277-329 27-81 (121)
46 2wi8_A Iron-uptake system-bind 20.3 1.8E+02 0.0061 27.7 6.8 50 280-329 90-143 (311)
No 1
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.3e-114 Score=938.16 Aligned_cols=526 Identities=34% Similarity=0.576 Sum_probs=489.5
Q ss_pred CCCccccccccccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHHHH
Q 036490 2 HSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIEL 81 (557)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~~ 81 (557)
.+|+.+++++.++++|.++|.+|+.||+.|+++||+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++
T Consensus 13 ~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~ 92 (553)
T 3ko1_A 13 GIPVIILKEGSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQI 92 (553)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHHHHHHHHH
T ss_pred CCeEEEEecCcccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChhHHHHHHH
Confidence 36888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhcc
Q 036490 82 SRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDRATVLGLVKSCIGTK 161 (557)
Q Consensus 82 ~~~~~~~~GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~~~~~l~~va~t~l~sk 161 (557)
|++|++++||||||++||+++||+++.+++++|+||+.|++||++|++.++++|++++++++..+++.|.++|+|+++||
T Consensus 93 a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK 172 (553)
T 3ko1_A 93 AKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSK 172 (553)
T ss_dssp HHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTS
T ss_pred hhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999998778999999999999999
Q ss_pred ccchhHHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCcccccCceEEEE
Q 036490 162 FTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILL 241 (557)
Q Consensus 162 ~~~~~~~~ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~~n~~Ill~ 241 (557)
+.+.|+++|++++++|+.+++.+. +|..++|++ +|+|+++.|++..+|++++|++|++++.|+ .|+++++||||+++
T Consensus 173 ~~~~~~~~i~~livdAv~~V~~~~-~G~~~~dl~-~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll~ 249 (553)
T 3ko1_A 173 AVAGAREYIADIVVKAVTQVAELR-GDKWYVDLD-NIQIVKKAGGSINDTQLVYGIVVDKEVVHP-GMPKRLENAKIALI 249 (553)
T ss_dssp SCCTTHHHHHHHHHHHHHHHCCCT-TSSCCCCGG-GEEEEECCCSCGGGCEEESEEEECSCBSCT-TSCSCCBSCEEEEE
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhc-CCceEEech-hHHHHHHhCCccccceeeEEEEecccccCC-CCccccccceEEEe
Confidence 999999999999999999998632 355568886 599999999999999999999999999999 89999999999999
Q ss_pred ecccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHH
Q 036490 242 DSPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNN 321 (557)
Q Consensus 242 ~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le 321 (557)
+++|++++++.++++.+++.+++..++++|++++++++++|.+.|+||||++++|++.+++||.++||++++++++.+|+
T Consensus 250 d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v~k~~le 329 (553)
T 3ko1_A 250 DASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLE 329 (553)
T ss_dssp CSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCCCHHHHH
T ss_pred cCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhhhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCccccCCCCCCCCCcCCccceEEEEEECceEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHH
Q 036490 322 RIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNI 401 (557)
Q Consensus 322 ~Ia~~tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~ 401 (557)
||+++|||+++++++++++++||+ |+.|++.++|+++|++|++|.++..|||+|||+|+.+++|.||+++|||+++|++
T Consensus 330 ria~~tGa~ivs~l~~l~~~~LG~-a~~v~~~~ig~d~~~~i~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a 408 (553)
T 3ko1_A 330 KLARATGGRVVSNIDEISEQDLGY-ASLIEERKVGEDKMVFVEGAKNPKSISILIRGGLERLVDETERALRDALGTVADV 408 (553)
T ss_dssp HHHTTTTCCEESCGGGCCSSSSEE-CSEEECCCCSSSCCEEEESCSSSSCEEEEECCSSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCeeecccccCChhhcch-HHHHHHhhcCcceEEEeccCCCCceEEEeeeccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCccccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceEEEe
Q 036490 402 IKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGID 481 (557)
Q Consensus 402 l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~Gid 481 (557)
+++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|..+++.++|||
T Consensus 409 v~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d 488 (553)
T 3ko1_A 409 IKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGID 488 (553)
T ss_dssp HHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEE
T ss_pred hhcCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEE
Confidence 99999999999999999999999988889999999999999999999999999999999999999999876532579999
Q ss_pred CCCCcccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcCCccCCC
Q 036490 482 GNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQA 531 (557)
Q Consensus 482 ~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~~~~~~~ 531 (557)
+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|.+.|
T Consensus 489 ~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~ 538 (553)
T 3ko1_A 489 LYAGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDDVVSAGKKSGG 538 (553)
T ss_dssp TTTTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHEEEECCC------
T ss_pred eecCCchHHHHhCccchhhhhhhhhhhcchhheEEEehHHHHHhhhhccC
Confidence 99999999999999999999999999999999999999999988765443
No 2
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=6.7e-114 Score=933.90 Aligned_cols=524 Identities=39% Similarity=0.637 Sum_probs=487.4
Q ss_pred CCCccccccccccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHHHH
Q 036490 2 HSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIEL 81 (557)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~~ 81 (557)
++|..+++++....+|.++|.+|+.||..|+++||+||||+||+|||+++.|+++|||||+||||+|+++||+|+|++++
T Consensus 4 ~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~Akll~e~ 83 (543)
T 1a6d_B 4 GQPIFILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEV 83 (543)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHHHHHHHHH
T ss_pred CcchhhcCCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchHHHHHHHH
Confidence 56878889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhcc
Q 036490 82 SRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDRATVLGLVKSCIGTK 161 (557)
Q Consensus 82 ~~~~~~~~GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~~~~~l~~va~t~l~sk 161 (557)
|++|++++||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++++|++..+++.|.++++|+|+||
T Consensus 84 a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sK 163 (543)
T 1a6d_B 84 SKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSK 163 (543)
T ss_dssp HTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTS
T ss_pred HHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999998667899999999999999
Q ss_pred ccchhHHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCcccccCceEEEE
Q 036490 162 FTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILL 241 (557)
Q Consensus 162 ~~~~~~~~ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~~n~~Ill~ 241 (557)
+.++|+++|++++++|+.+++++. +|..++|++ +|+|++++|+++++|++++|++|++++.|| .|+++++||||+++
T Consensus 164 i~~~~~~~i~~livdAv~~v~~~~-~g~~~~d~~-~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll~ 240 (543)
T 1a6d_B 164 SASVAKDKLAEISYEAVKSVAELR-DGKYYVDFD-NIQVVKKQGGAIDDTQLINGIIVDKEKVHP-GMPDVVKDAKIALL 240 (543)
T ss_dssp GGGGGHHHHHHHHHHHHHHHEEEC-SSSEEECGG-GEEEEEEESSCGGGCEEESEEEESCCCSST-TSCSEEEEEEEEEE
T ss_pred cccccHHHHHHHHHHHHHHhcccc-cCCcccccc-eEEEEEecCCCccceeEEccEEEecCCCCC-CCcceecCCeEEEE
Confidence 999999999999999999998531 244467875 799999999999999999999999999999 89999999999999
Q ss_pred ecccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHH
Q 036490 242 DSPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNN 321 (557)
Q Consensus 242 ~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le 321 (557)
+++|++++++.+.++.+++.++++.++++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++++|+
T Consensus 241 ~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k~~le 320 (543)
T 1a6d_B 241 DAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMD 320 (543)
T ss_dssp SSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHH
T ss_pred ecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCccccCCCCCCCCCcCCccceEEEEEECceEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHH
Q 036490 322 RIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNI 401 (557)
Q Consensus 322 ~Ia~~tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~ 401 (557)
||+++|||+++++++++++++||+ |+.|++.++|+++|++|++|.++++|||+|||+|+.+++|.||+++|||+++|++
T Consensus 321 ~ia~~tGa~iis~l~~l~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a 399 (543)
T 1a6d_B 321 KLAKATGASIVSTIDEISSSDLGT-AERVEQVKVGEDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVASA 399 (543)
T ss_dssp HHHHHHTCCEESCGGGCCGGGCEE-EEEEEEEEETTEEEEEEEEESSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCceecccccCCHHHCCC-ceEEEEEEecCceEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCccccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceEEEe
Q 036490 402 IKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGID 481 (557)
Q Consensus 402 l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~Gid 481 (557)
+++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..+. .++|||
T Consensus 400 ~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d 478 (543)
T 1a6d_B 400 LEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGN-KTYGIN 478 (543)
T ss_dssp HHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTC-TTEEEE
T ss_pred HHCCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCC-CCeeEe
Confidence 9999999999999999999999998888999999999999999999999999999999999999999997654 689999
Q ss_pred CCCCcccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcCCccCC
Q 036490 482 GNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ 530 (557)
Q Consensus 482 ~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~~~~~~ 530 (557)
+.+|++.||.+.|||||+.||+++|+.|+|+|++||+||++|...|.+.
T Consensus 479 ~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~ 527 (543)
T 1a6d_B 479 VFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIATKSSSS 527 (543)
T ss_dssp TTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEEEC------
T ss_pred CCCCcccchhhcCceecHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCC
Confidence 9999999999999999999999999999999999999999998876543
No 3
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=1.9e-113 Score=930.25 Aligned_cols=525 Identities=38% Similarity=0.634 Sum_probs=500.7
Q ss_pred CCCCccccccccccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHHH
Q 036490 1 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIE 80 (557)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~ 80 (557)
|++|+.+++++.+..+|.++|.+|+.||+.|+++||+||||+||+|||+++.|+++|||||+||||+|+++||+|+|+++
T Consensus 5 ~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e 84 (548)
T 1q3q_A 5 SGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVE 84 (548)
T ss_dssp ----CCCSCTTCEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHHHHHHHH
T ss_pred CCCCcccccCCcceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchHHHHHHH
Confidence 35687788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhc
Q 036490 81 LSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDRATVLGLVKSCIGT 160 (557)
Q Consensus 81 ~~~~~~~~~GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~~~~~l~~va~t~l~s 160 (557)
+|++|++++||||||++||+++||+++.+++++|+||+.|++||+.|++.++++|+++++|++..+++.|.++++|+|+|
T Consensus 85 ~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~s 164 (548)
T 1q3q_A 85 VAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITG 164 (548)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCS
T ss_pred HHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999876789999999999999
Q ss_pred cccchhHHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCcccccCceEEE
Q 036490 161 KFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIIL 240 (557)
Q Consensus 161 k~~~~~~~~ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~~n~~Ill 240 (557)
|+.++|+++|++++++|+.+++++. .|..++|++ +|+|++++|+++++|++++|++|++++.|| .|+++++||||++
T Consensus 165 Ki~~~~~~~i~~livdAv~~V~~~~-~g~~~~d~~-~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll 241 (548)
T 1q3q_A 165 KNAESHKELLAKLAVEAVKQVAEKK-DGKYVVDLD-NIKFEKKAGEGVEESELVRGVVIDKEVVHP-RMPKRVENAKIAL 241 (548)
T ss_dssp STTGGGHHHHHHHHHHHHHHHCEES-SSSEECCGG-GEEEEEEEBSCGGGCEEESSEEESCCCSST-TSCSEESSEEEEE
T ss_pred cccccchHHHHHHHHHHHHHhcccc-CCCccccCC-eEEEEEecCCCccceEEEeeEEEeccCCCC-CCcceecCCEEEE
Confidence 9999999999999999999998531 143467775 799999999999999999999999999999 8999999999999
Q ss_pred EecccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHH
Q 036490 241 LDSPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDN 320 (557)
Q Consensus 241 ~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~l 320 (557)
++++|++++++.+.++.+++.++++.+.++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++++|
T Consensus 242 ~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~l 321 (548)
T 1q3q_A 242 INEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDM 321 (548)
T ss_dssp ECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHH
T ss_pred EecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEEccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCccccCCCCCCCCCcCCccceEEEEEECceEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHH
Q 036490 321 NRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARN 400 (557)
Q Consensus 321 e~Ia~~tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~ 400 (557)
+||+++||++++++++++++++||+ |+.|++.++|+++|++|++|.++++|||+|||+|+.+++|.||+++|||+++|+
T Consensus 322 e~ia~~tGa~ii~~l~~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~ 400 (548)
T 1q3q_A 322 EKLAKATGAKIVTNVKDLTPEDLGY-AEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKD 400 (548)
T ss_dssp HHHHHHHCCCCBSSGGGCCGGGCEE-ESEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEecccccCCHHHCCC-ceEEEEEEecCceEEEEecCCCCCeEEEEECCCChHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCccccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceEEE
Q 036490 401 IIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGI 480 (557)
Q Consensus 401 ~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~Gi 480 (557)
++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..++ .++||
T Consensus 401 a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~ 479 (548)
T 1q3q_A 401 VMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRG-LGIGI 479 (548)
T ss_dssp HHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHC-TTEEE
T ss_pred HHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCC-CCcce
Confidence 99999999999999999999999998878889999999999999999999999999999999999999886543 67999
Q ss_pred eCCCCcccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcCCccCC
Q 036490 481 DGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ 530 (557)
Q Consensus 481 d~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~~~~~~ 530 (557)
|..+|++.||++.|||||+.||+++|+.|+|+|++||+||++|...|.++
T Consensus 480 d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~ 529 (548)
T 1q3q_A 480 DVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKATKP 529 (548)
T ss_dssp ETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEECCC---
T ss_pred eCCCCCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCC
Confidence 99999999999999999999999999999999999999999998876543
No 4
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=3.7e-113 Score=927.13 Aligned_cols=520 Identities=38% Similarity=0.634 Sum_probs=499.9
Q ss_pred CCccccccccccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHHHHH
Q 036490 3 SPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELS 82 (557)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~~~ 82 (557)
+| .+++++.++++|.++|.+|+.||+.|+++||+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|
T Consensus 4 ~p-~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a 82 (543)
T 3ruv_A 4 QP-GVLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLIEVA 82 (543)
T ss_dssp CC-CSSCSSEEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHHHHHHHHHH
T ss_pred CC-eeecCCcchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHH
Confidence 67 88899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhccc
Q 036490 83 RTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDRATVLGLVKSCIGTKF 162 (557)
Q Consensus 83 ~~~~~~~GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~~~~~l~~va~t~l~sk~ 162 (557)
++|++++||||||++||+++||+++.+++++|+||+.|++||+.|++.++++|++++++++..+++.|.++|+|+++||+
T Consensus 83 ~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~ 162 (543)
T 3ruv_A 83 KTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKG 162 (543)
T ss_dssp HHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999987789999999999999999
Q ss_pred cchhHHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCcccccCceEEEEe
Q 036490 163 TSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLD 242 (557)
Q Consensus 163 ~~~~~~~ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~~n~~Ill~~ 242 (557)
.+.|+++|++++++|+.+++.+ +|. +|++ +|+|++..|++..+|++++|++|++++.|+ .|+++++||||++++
T Consensus 163 ~~~~~~~i~~livdAv~~V~~~--~g~--~dl~-~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~-~m~~~~~n~kIll~~ 236 (543)
T 3ruv_A 163 AEKAKEKLAEIIVEAVSAVVDD--EGK--VDKD-LIKIEKKSGASIDDTELIKGVLVDKERVSA-QMPKKVTDAKIALLN 236 (543)
T ss_dssp GGGCCHHHHHHHHHHHHHHCCT--TSC--CCGG-GEEEEEEECSCGGGCEEESSEEESCCCSCT-TSCSEEEEEEEEEES
T ss_pred cchhHHHHHHHHHHHHHHhhcc--CCC--cccc-eEEEEEcCCCCcccceeecceEEeccccCc-cccccccCcEEEEEc
Confidence 9999999999999999999853 243 7776 699999999999999999999999999999 899999999999999
Q ss_pred cccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHHH
Q 036490 243 SPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNR 322 (557)
Q Consensus 243 ~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le~ 322 (557)
++|++++++.++++.+++.+++.+++++|++++++++++|.+.|+||||++++|++.+++||.++||++++++++.+|+|
T Consensus 237 ~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le~ 316 (543)
T 3ruv_A 237 CAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEK 316 (543)
T ss_dssp SCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHH
T ss_pred ccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCccccCCCCCCCCCcCCccceEEEEEECceEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHH
Q 036490 323 IAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNII 402 (557)
Q Consensus 323 Ia~~tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~l 402 (557)
|+++|||+++++++++++++||+ |+.|++.++|+++|++|++|.++..|||+|||+|+.+++|.||+++|||+++|+++
T Consensus 317 ia~~tGa~iis~l~~l~~~~LG~-a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av 395 (543)
T 3ruv_A 317 LAKATGANVIAAIAALSAQDLGD-AGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTI 395 (543)
T ss_dssp HHHHHCCCEESCGGGCCGGGCEE-EEEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCceecccccCCHHHCCc-ccEEEEEEeCCceEEEEECCCCCceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred hCCccccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhh-CCCCceEEEe
Q 036490 403 KNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHA-NGENAWIGID 481 (557)
Q Consensus 403 ~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~-~~~~~~~Gid 481 (557)
++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|. .++ .++|||
T Consensus 396 ~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~-~~~G~d 474 (543)
T 3ruv_A 396 EDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGN-KCAGLN 474 (543)
T ss_dssp HHCEEEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCC-TTEEEC
T ss_pred hcCCeecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCC-ceeeee
Confidence 999999999999999999999999889999999999999999999999999999999999999999986 554 689999
Q ss_pred CCCCcccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcCCccCCC
Q 036490 482 GNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQA 531 (557)
Q Consensus 482 ~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~~~~~~~ 531 (557)
+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|.++|
T Consensus 475 ~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~ 524 (543)
T 3ruv_A 475 VFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLRGA 524 (543)
T ss_dssp TTTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEEEC-----
T ss_pred CCCCccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHhheecCccCCC
Confidence 99999999999999999999999999999999999999999988766543
No 5
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-112 Score=920.67 Aligned_cols=512 Identities=31% Similarity=0.489 Sum_probs=490.5
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHHHHHHhhhhhcCC
Q 036490 12 LKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGD 91 (557)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 91 (557)
.++++|.++|.+|+.||+.|+++||+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e~GD 82 (529)
T 3iyg_A 3 GDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGD 82 (529)
T ss_pred cchhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhhhCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhh-ccccCCCCcHHHHHHHHHHhhhccccchhHHHH
Q 036490 92 GTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDT-IAMPIDANDRATVLGLVKSCIGTKFTSQFGDLL 170 (557)
Q Consensus 92 Gttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~s~~i~~~~~~~l~~va~t~l~sk~~~~~~~~l 170 (557)
||||+|||+++||+++.+++++|+||+.|++||+.|++.++++|++ ++++++..+++.|.++|+|+++||+.++|+++|
T Consensus 83 GTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i 162 (529)
T 3iyg_A 83 GTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFF 162 (529)
T ss_pred ChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHHH
Confidence 9999999999999999999999999999999999999999999998 999998767899999999999999999999999
Q ss_pred HHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCcccccCceEEEEecccccccc
Q 036490 171 ADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKG 250 (557)
Q Consensus 171 s~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~~n~~Ill~~~~Le~~k~ 250 (557)
++++++|+.+++...++|..++|++ +|+|++.+|+++.||++++|++|++++.|+ .||++++||||++++++|+++++
T Consensus 163 ~~livdAv~~V~~~~~~g~~~~dv~-~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIlll~~~le~~k~ 240 (529)
T 3iyg_A 163 ANLVVDAVLAIKYTDIRGQPRYPVN-SINVLKAHGRSQMESMLINGYALNCVVGSQ-GMPKRIVNAKIACLDFSLQKTKM 240 (529)
T ss_pred HHHHHHHHHHHhhhccCCCcccccc-eEEEEEecCCCccceEEEeeeEEecCcccc-cCCcccCCceEEEecCCcccccc
Confidence 9999999999974222454567776 599999999999999999999999999999 89999999999999999999999
Q ss_pred cccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHHHHHHHhCCc
Q 036490 251 ENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (557)
Q Consensus 251 ~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le~Ia~~tGa~ 330 (557)
+.+.++.+++++++..+.++|++++++++++|.+.|+||||++++|++.+++||.++||++++++++++|+||+++|||+
T Consensus 241 e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~~tGa~ 320 (529)
T 3iyg_A 241 KLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGAT 320 (529)
T ss_pred cCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHHHhCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCC------CCCcCCccceEEEEEECceEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhC
Q 036490 331 IVNRPDELQ------ESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKN 404 (557)
Q Consensus 331 iis~~~~l~------~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~l~~ 404 (557)
+++++++++ ++++|+ |+.|+++++|+++|++|++|.++++|||+|||+|+.+++|.||+++|||+++|+++++
T Consensus 321 iv~~~~~l~~~e~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~ 399 (529)
T 3iyg_A 321 VLSTLANLEGEETFEASMLGQ-AEEVVQERICDDELILIKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKRVLES 399 (529)
T ss_pred eecchhcccchhccChhhCcc-ceEEEEEEeCCceEEEEEcCCCCceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999987765 568999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCC-------Cce
Q 036490 405 PKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGE-------NAW 477 (557)
Q Consensus 405 g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~-------~~~ 477 (557)
|++|||||++|++|+.+|++++.+.++++|+++++||+||+.||++|++|||+|+.+++.+|++.|..++ ..+
T Consensus 400 ~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~ 479 (529)
T 3iyg_A 400 KSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKW 479 (529)
T ss_pred CeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCce
Confidence 9999999999999999999999889999999999999999999999999999999999999999997653 157
Q ss_pred EEEeCCCCcccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 036490 478 IGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGI 526 (557)
Q Consensus 478 ~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~~ 526 (557)
+|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...
T Consensus 480 ~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (529)
T 3iyg_A 480 IGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLH 528 (529)
T ss_pred eeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Confidence 9999999999999999999999999999999999999999999999763
No 6
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.9e-112 Score=916.99 Aligned_cols=512 Identities=62% Similarity=1.016 Sum_probs=492.9
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHHHHHHhhhhhcCC
Q 036490 12 LKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGD 91 (557)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 91 (557)
.++++|.++|.+|+.||+.|+++||+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 2 ~~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GD 81 (515)
T 3iyg_G 2 TKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGD 81 (515)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhhhCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhccccchhHHHHH
Q 036490 92 GTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDRATVLGLVKSCIGTKFTSQFGDLLA 171 (557)
Q Consensus 92 Gttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~~~~~l~~va~t~l~sk~~~~~~~~ls 171 (557)
||||+|||+++||+++.+++++|+||+.|++||++|++.++++|+++++|++..+++.|.++++|+++||..+.|.++++
T Consensus 82 GTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~ 161 (515)
T 3iyg_G 82 GTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLAC 161 (515)
T ss_pred ChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987778999999999999999999999999
Q ss_pred HHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCcccccCceEEEEeccccccccc
Q 036490 172 DLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGE 251 (557)
Q Consensus 172 ~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~~n~~Ill~~~~Le~~k~~ 251 (557)
+++++|+..+.++. ++..++|++++|+|++++|+++++|++++|++|++++.|| .|+++++||||++++++|++++++
T Consensus 162 ~i~vdav~~V~~~~-~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll~~~~Le~~k~e 239 (515)
T 3iyg_G 162 NIALDAVKTVQFEE-NGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHP-RMRRYIKNPRIVLLDSSLEYKKGE 239 (515)
T ss_pred HHHHHHHHhccccc-CCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCC-CCcceeeeeEEEEEcccccccccc
Confidence 99999999987422 2334578877799999999999999999999999999999 899999999999999999999999
Q ss_pred ccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHHHHHHHhCCcc
Q 036490 252 NQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVI 331 (557)
Q Consensus 252 ~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le~Ia~~tGa~i 331 (557)
.++++.+++++++.++++.|++++++++++|.+.|++|||++++|++.+++||.++||++++++++.+|+||+++|||++
T Consensus 240 ~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~tGa~i 319 (515)
T 3iyg_G 240 SQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARI 319 (515)
T ss_pred cCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHHhCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCcCCccceEEEEEECceEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhCCccccCC
Q 036490 332 VNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGG 411 (557)
Q Consensus 332 is~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvpGG 411 (557)
+++++++++++||+.|+.|++.++|+++|++|++|.+++.|||+|||+|+.+++|.||+++|||+++|++++++++||||
T Consensus 320 i~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGG 399 (515)
T 3iyg_G 320 VSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGG 399 (515)
T ss_pred eccccccChhhcCCcccEEEEEEECCceEEEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCC
Confidence 99999999999996599999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceEEEeCCCCcccccc
Q 036490 412 GATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMK 491 (557)
Q Consensus 412 G~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~Gid~~~g~i~d~~ 491 (557)
|++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|..++..++|||+.+|++.||+
T Consensus 400 Ga~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~ 479 (515)
T 3iyg_G 400 GASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMK 479 (515)
T ss_pred CHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccH
Confidence 99999999999999989999999999999999999999999999999999999999998765336799999999999999
Q ss_pred cCccccchHHHHHHHHHHHHHHHHHHhhhhhhcC
Q 036490 492 EGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSG 525 (557)
Q Consensus 492 ~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~ 525 (557)
+.|||||+.||+++|+.|+|+|++|||||++|..
T Consensus 480 ~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 513 (515)
T 3iyg_G 480 ELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSG 513 (515)
T ss_pred HcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeec
Confidence 9999999999999999999999999999999975
No 7
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=6.7e-114 Score=933.19 Aligned_cols=525 Identities=31% Similarity=0.541 Sum_probs=491.4
Q ss_pred CCCCccccccccccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHHH
Q 036490 1 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIE 80 (557)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~ 80 (557)
|+.|+.+++++.++++|.+++.+|+.||+.|+++||+||||+||+|||+++.|+++|||||+||||+|+++||+|+|+++
T Consensus 6 ~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e 85 (550)
T 3p9d_G 6 QTPTIVVLKEGTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLVD 85 (550)
T ss_dssp ----------CCCEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHHHHHHHH
T ss_pred CCcchhhhcCCcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHH
Confidence 57788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCCCc---HHHHHHHHHHh
Q 036490 81 LSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDAND---RATVLGLVKSC 157 (557)
Q Consensus 81 ~~~~~~~~~GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~~---~~~l~~va~t~ 157 (557)
+|++||+++||||||++||+++||+++.+++++|+||+.|++||++|++.++++|++++++++..+ ++.|.++|+|+
T Consensus 86 ~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~ts 165 (550)
T 3p9d_G 86 ISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTA 165 (550)
T ss_dssp HHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHH
T ss_pred HHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999987655 78899999999
Q ss_pred hhccccchhHHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCC--CCcccccC
Q 036490 158 IGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPG--KMRRKIVN 235 (557)
Q Consensus 158 l~sk~~~~~~~~ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~--~~~~~~~n 235 (557)
++||+.+.|+++|++++++|+.++++ .++|++ +|.|++++|+++++|++++|++|++++.||+ +||++++|
T Consensus 166 l~sK~~~~~~~~i~~livdAv~~V~~------~~~dl~-~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en 238 (550)
T 3p9d_G 166 MSSKLIHNNADFFVKMCVDAVLSLDR------NDLDDK-LIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNN 238 (550)
T ss_dssp HHHTTTGGGHHHHHHHHHHHHHHCCS------SSCCGG-GCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSS
T ss_pred ccCccccccHhHHHHHHHHHHHHhCc------cccCch-heeEEEecCCCccceeEEeeEEEeccccccccccCcccccC
Confidence 99999999999999999999999973 247775 6999999999999999999999999999873 78999999
Q ss_pred ceEEEEecccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecC
Q 036490 236 PRIILLDSPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRL 315 (557)
Q Consensus 236 ~~Ill~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v 315 (557)
|||++++++|++++++.++++.+++.+++.++++.|++++++++++|.+.|++||+++++|++.+++||.++||++++++
T Consensus 239 ~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v~~v 318 (550)
T 3p9d_G 239 PKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRV 318 (550)
T ss_dssp CCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEEECC
T ss_pred ceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHhCCccccCCCCCCCCCcCCccceEEEEEECceEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHH
Q 036490 316 RKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAM 395 (557)
Q Consensus 316 ~~~~le~Ia~~tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal 395 (557)
++.+|+||+++||+++++++++++++++|+ |+.|++.++|+++|++|++|.++++|||+|||+|+.+++|.||+++|||
T Consensus 319 ~k~~lerIa~~tGa~iis~l~~l~~~~LG~-a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl 397 (550)
T 3p9d_G 319 SADDMNRVIQAVGGSIQSTTSDIKPEHLGT-CALFEEMQIGSERYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAI 397 (550)
T ss_dssp CTTHHHHHHHHTCCCCBSSGGGCCGGGCCC-CSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCSSSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCceecchhhCCHHHcCC-ceEEEEEEeCCeEEEEEecCCCCceeEEEEeCCcHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCccccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCC
Q 036490 396 SVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGEN 475 (557)
Q Consensus 396 ~~~~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~ 475 (557)
+++|+++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|..++
T Consensus 398 ~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~- 476 (550)
T 3p9d_G 398 MIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGE- 476 (550)
T ss_dssp HHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSC-
T ss_pred HHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC-
Confidence 9999999999999999999999999999998888999999999999999999999999999999999999999987664
Q ss_pred ceEEEeCCCCcccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcCCccCCCCCC
Q 036490 476 AWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGS 534 (557)
Q Consensus 476 ~~~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~~~~~~~~~~ 534 (557)
+++|||+.+|++.||++.|||||+.||+++|+.|+|+|++||+||++|...|.+.++.+
T Consensus 477 ~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~~~ 535 (550)
T 3p9d_G 477 KWYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSVDETITNKGSESANAG 535 (550)
T ss_dssp SCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEECCCCCC-----
T ss_pred CceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHHHHHHhHHHHhhCCCcccccCC
Confidence 68999999999999999999999999999999999999999999999998776665444
No 8
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.2e-112 Score=923.40 Aligned_cols=519 Identities=39% Similarity=0.638 Sum_probs=488.3
Q ss_pred CccccccccccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHHHHHH
Q 036490 4 PVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSR 83 (557)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~~~~ 83 (557)
|..+++++.+..+|.++|.+|+.||..|+++||+||||+||+|||+++.|+++|||||+||||+|+++||+|+|++++|+
T Consensus 7 ~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~ 86 (545)
T 1a6d_A 7 PILVLKEGTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSK 86 (545)
T ss_dssp ----------CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHHHHHHHGGGG
T ss_pred cccccCCcchhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchHHHHHHHHHH
Confidence 77788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhcccc
Q 036490 84 TQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDRATVLGLVKSCIGTKFT 163 (557)
Q Consensus 84 ~~~~~~GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~~~~~l~~va~t~l~sk~~ 163 (557)
+|++++||||||++||+++||+++.+++++|+||+.|++||+.|++.++++|+++++| + .+++.|.++++|+|+||+.
T Consensus 87 ~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~-~~~~~l~~va~tsl~sKi~ 164 (545)
T 1a6d_A 87 AQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-S-TDDATLRKIALTALSGKNT 164 (545)
T ss_dssp CTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-C-CCHHHHHHHHHHHTTTSSC
T ss_pred hcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-C-CCHHHHHHHHHHHHhcccc
Confidence 9999999999999999999999999999999999999999999999999999999999 7 6789999999999999999
Q ss_pred chhHHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCcccccCceEEEEec
Q 036490 164 SQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDS 243 (557)
Q Consensus 164 ~~~~~~ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~~n~~Ill~~~ 243 (557)
++|+++|++++++|+.+++++. .|..++|++ +|+|++++|+++++|++++|++|++++.|| .|+++++||||+++++
T Consensus 165 ~~~~~~i~~livdAv~~v~~~~-~g~~~~d~~-~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll~~~ 241 (545)
T 1a6d_A 165 GLSNDFLADLVVKAVNAVAEVR-DGKTIVDTA-NIKVDKKNGGSVNDTQFISGIVIDKEKVHS-KMPDVVKNAKIALIDS 241 (545)
T ss_dssp CSTHHHHHHHHHHHHHHHCEES-SSSEECCGG-GEEEEECCCSCSTTCEEESEEEESCCCSCT-TSCSEEEEEEEEEECS
T ss_pred cccHHHHHHHHHHHHHHHhccc-CCCcccccc-eEEEEEecCCCceeeEEEeeEEEeccCCCC-CCcceecCCEEEEEec
Confidence 9999999999999999998532 233467775 799999999999999999999999999999 8999999999999999
Q ss_pred ccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHHHH
Q 036490 244 PLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRI 323 (557)
Q Consensus 244 ~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le~I 323 (557)
+|++++++.+.++.+++.++++.++++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++++|+||
T Consensus 242 ~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~i 321 (545)
T 1a6d_A 242 ALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKL 321 (545)
T ss_dssp CBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHHHHHH
T ss_pred CCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCccccCCCCCCCCCcCCccceEEEEEECceEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHh
Q 036490 324 AKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIK 403 (557)
Q Consensus 324 a~~tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~l~ 403 (557)
+++||++++++++++++++||+ |+.|++.++|+++|++|++|.++++|||+|||+|+.+++|.||+++|||+++|++++
T Consensus 322 a~~tGa~iis~l~~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~ 400 (545)
T 1a6d_A 322 AKATGAKIVTDLDDLTPSVLGE-AETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKE 400 (545)
T ss_dssp HHHHCCCEESSGGGCCGGGCEE-EEEEEEEEETTEEEEEEEEESCSSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCeeecccccCCHHHCCC-ceEEEEEEecCceEEEEecCCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceEEEeCC
Q 036490 404 NPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGN 483 (557)
Q Consensus 404 ~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~Gid~~ 483 (557)
+|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|..++ .++|||..
T Consensus 401 ~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~ 479 (545)
T 1a6d_A 401 DGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGR-ISVGVDLD 479 (545)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTC-TTEEEETT
T ss_pred CCCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCC-CCcceecc
Confidence 99999999999999999999998888899999999999999999999999999999999999999997654 67999999
Q ss_pred CCcccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcCCccC
Q 036490 484 TGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK 529 (557)
Q Consensus 484 ~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~~~~~ 529 (557)
+|++.||++.|||||+.||+++|+.|+|+|++||+||++|...|.+
T Consensus 480 ~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~ 525 (545)
T 1a6d_A 480 NNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKKST 525 (545)
T ss_dssp TTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC------
T ss_pred cCccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 9999999999999999999999999999999999999999887654
No 9
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-111 Score=908.91 Aligned_cols=507 Identities=33% Similarity=0.572 Sum_probs=488.2
Q ss_pred ccccccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHHHHHHhhhhh
Q 036490 9 KDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEE 88 (557)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~~~~~~~~~ 88 (557)
++++++++|.+++.+|+.||+.|+++||+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|+++
T Consensus 1 ~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~ 80 (515)
T 3iyg_H 1 KEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAE 80 (515)
T ss_pred CCCccccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhce
Confidence 46778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCCCc----HHHHHHHHHHhhhccccc
Q 036490 89 VGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDAND----RATVLGLVKSCIGTKFTS 164 (557)
Q Consensus 89 ~GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~~----~~~l~~va~t~l~sk~~~ 164 (557)
+||||||++||+++||+++.+++.+|+||+.|++||+.|++.++++|+++++|++..+ ++.|.++|+|+++||+.+
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s 160 (515)
T 3iyg_H 81 VGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLIS 160 (515)
T ss_pred eCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCccc
Confidence 9999999999999999999999999999999999999999999999999999986445 677899999999999999
Q ss_pred hhHHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCC--CCcccccCceEEEEe
Q 036490 165 QFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPG--KMRRKIVNPRIILLD 242 (557)
Q Consensus 165 ~~~~~ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~--~~~~~~~n~~Ill~~ 242 (557)
.|+++|++++++|+.+++. ++|+. +|+|+++.|++..+|++++|++|++++.||+ +||++++||||++++
T Consensus 161 ~~~~~i~~livdAv~~V~~-------~~d~~-~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~ 232 (515)
T 3iyg_H 161 QQKAFFAKMVVDAVMMLDD-------LLQLK-MIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLN 232 (515)
T ss_pred ccHHHHHHHHHHHHHHhcc-------cCCcc-eEEEEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEc
Confidence 9999999999999999962 35554 6999999999999999999999999999983 358899999999999
Q ss_pred cccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHHH
Q 036490 243 SPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNR 322 (557)
Q Consensus 243 ~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le~ 322 (557)
++|++++++.++++.+++++++.+++++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++.+|+|
T Consensus 233 ~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~ler 312 (515)
T 3iyg_H 233 VELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKR 312 (515)
T ss_pred ccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCccccCCCCCCCCCcCCccceEEEEEECceEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHH
Q 036490 323 IAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNII 402 (557)
Q Consensus 323 Ia~~tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~l 402 (557)
|+++|||+++++++++++++||+ |+.|++.++|+++|++|++|.++..|||+|||+|+.+++|.||+++|||+++|+++
T Consensus 313 ia~~tGa~ii~~l~~~~~~~LG~-a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v 391 (515)
T 3iyg_H 313 TMMACGGSIQTSVNALSSDVLGR-CQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAI 391 (515)
T ss_pred HHHHhCCEEeeccccCCHHHCCc-ccEEEEEEEcCeEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred hCCccccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceEEEeC
Q 036490 403 KNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDG 482 (557)
Q Consensus 403 ~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~Gid~ 482 (557)
+++++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|..++ .++|||+
T Consensus 392 ~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~ 470 (515)
T 3iyg_H 392 KNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGG-MWYGVDI 470 (515)
T ss_pred hCCCeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccC-CCeeEeC
Confidence 998899999999999999999999889999999999999999999999999999999999999999997765 6799999
Q ss_pred CCCcccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcC
Q 036490 483 NTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSG 525 (557)
Q Consensus 483 ~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~ 525 (557)
.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|.+
T Consensus 471 ~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 513 (515)
T 3iyg_H 471 NTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKN 513 (515)
T ss_pred CCCcccccHhccCEECHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999975
No 10
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=8.6e-112 Score=918.34 Aligned_cols=519 Identities=29% Similarity=0.453 Sum_probs=495.4
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHHHHHHhhhh
Q 036490 8 LKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDE 87 (557)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~~~~~~~~ 87 (557)
++++.+.++|.++|.+|+.||+.|+++||+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++
T Consensus 13 ~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~ 92 (559)
T 3p9d_A 13 LFLGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQDR 92 (559)
T ss_dssp CCSSCEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHHHHHHHHHHHHHHH
T ss_pred hhccccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 67888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhh-ccccCCCCcHHHHHHHHHHhhhccccchh
Q 036490 88 EVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDT-IAMPIDANDRATVLGLVKSCIGTKFTSQF 166 (557)
Q Consensus 88 ~~GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~s~~i~~~~~~~l~~va~t~l~sk~~~~~ 166 (557)
++||||||++||+++||+++.+++++|+||+.|++||++|++.++++|++ +++|++..+++.|.++|+|+++||+.++|
T Consensus 93 e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~ 172 (559)
T 3p9d_A 93 EIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGAD 172 (559)
T ss_dssp HTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGGGTT
T ss_pred HcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccch
Confidence 99999999999999999999999999999999999999999999999999 99999865678999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccc--CceEEEEecc
Q 036490 167 GDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIV--NPRIILLDSP 244 (557)
Q Consensus 167 ~~~ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~~--n~~Ill~~~~ 244 (557)
+++|++++++|+.++++...++...+|++ +|+|++++|+++++|++++|++|++++.|| .|+++++ ||||++++++
T Consensus 173 ~~~i~~livdAv~~V~~~~~~~~~~i~l~-~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~-~m~~~ie~~n~kIll~~~~ 250 (559)
T 3p9d_A 173 SDFFSNMVVDALLAVKTQNSKGEIKYPVK-AVNVLKAHGKSATESLLVPGYALNCTVASQ-AMPKRIAGGNVKIACLDLN 250 (559)
T ss_dssp HHHHHHHHHHHHHHHCCEESSSCEECCTT-CCCEEEEESSCSSCCBCCSEECCCCCCSST-TSCSEECSSSBCEEEETTC
T ss_pred hHHHHHHHHHHHHHhcccccCCCCccchh-HeEEEEecCCCccceeEeccEEEeecccCC-CcceeeccCCceEEEEecc
Confidence 99999999999999984111222357776 499999999999999999999999999999 8999999 9999999999
Q ss_pred cccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHHHHH
Q 036490 245 LEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIA 324 (557)
Q Consensus 245 Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le~Ia 324 (557)
|++++++.++++.+++.+++..+.++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++.+|+||+
T Consensus 251 Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia 330 (559)
T 3p9d_A 251 LQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRCKKEDLRRIA 330 (559)
T ss_dssp CSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTCEEESSCCHHHHHHHH
T ss_pred ccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCCceEccCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCccccCC------CCCCCCCcCCccceEEEEEECceEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHH
Q 036490 325 KACGAVIVNRP------DELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVA 398 (557)
Q Consensus 325 ~~tGa~iis~~------~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~ 398 (557)
++|||++++++ +++++++||+ |+.|++.++|+++|++|++|.++++|||+|||+|+.+++|.||+++|||+++
T Consensus 331 ~~TGa~iis~~~~l~~~e~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAL~~~ 409 (559)
T 3p9d_A 331 RATGATLVSSMSNLEGEETFESSYLGL-CDEVVQAKFSDDECILIKGTSKHSSSSIILRGANDYSLDEMERSLHDSLSVV 409 (559)
T ss_dssp HHSSCCCBCCSCCSTTCCCCCTTTSCC-EEEEEEEECSSCEEECEEEESSSCCCCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCEEEeccccccccccCCHhHCcc-ceEEEEEEEcCceEEEEEcCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999998 7899999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCccccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCc--
Q 036490 399 RNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENA-- 476 (557)
Q Consensus 399 ~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~-- 476 (557)
|+++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|..++ .
T Consensus 410 r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~-~~~ 488 (559)
T 3p9d_A 410 KRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQ-MAK 488 (559)
T ss_dssp HHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTS-CCC
T ss_pred HHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccc-ccc
Confidence 9999999999999999999999999999889999999999999999999999999999999999999999987654 3
Q ss_pred ----------eEEEeCCCCcccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcCCccCC
Q 036490 477 ----------WIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ 530 (557)
Q Consensus 477 ----------~~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~~~~~~ 530 (557)
++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|++.
T Consensus 489 ~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~ 552 (559)
T 3p9d_A 489 PEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVDPEPP 552 (559)
T ss_dssp ----CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCCCC
T ss_pred ccccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCccc
Confidence 799999999999999999999999999999999999999999999998876554
No 11
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=6.9e-111 Score=904.52 Aligned_cols=505 Identities=29% Similarity=0.449 Sum_probs=487.2
Q ss_pred ccccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCC--CCEEEeccHHHHhhhccccChHHHHHHHHHHhhhhh
Q 036490 11 SLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDAS--GGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEE 88 (557)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~--g~~~iT~DG~tIl~~l~~~hP~a~ll~~~~~~~~~~ 88 (557)
+.++++|.++|.+|+.||+.|+++||+||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|+++
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd~e 81 (513)
T 3iyg_B 2 GADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDE 81 (513)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhhhh
Confidence 457889999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCCC---cHHHHHHHHHHhhhccccch
Q 036490 89 VGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDAN---DRATVLGLVKSCIGTKFTSQ 165 (557)
Q Consensus 89 ~GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~---~~~~l~~va~t~l~sk~~~~ 165 (557)
+||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++++|++.. +++.|.++|+|+++||+.++
T Consensus 82 ~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~ 161 (513)
T 3iyg_B 82 VGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTH 161 (513)
T ss_pred hCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhccccccc
Confidence 999999999999999999999999999999999999999999999999999998732 57899999999999999999
Q ss_pred hHHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCcccccCceEEEEeccc
Q 036490 166 FGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPL 245 (557)
Q Consensus 166 ~~~~ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~~n~~Ill~~~~L 245 (557)
|+++|++++++|+.+++. ++|+. +|+|+++.|++..+|++++|++|++++.++ |+++++||||++++++|
T Consensus 162 ~~~~i~~livdAv~~V~~-------~~d~~-~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~--m~~~~en~kIll~~~~L 231 (513)
T 3iyg_B 162 HKDHFTKLAVEAVLRLKG-------SGNLE-AIHVIKKLGGSLADSYLDEGFLLDKKIGVN--QPKRIENAKILIANTGM 231 (513)
T ss_pred chHHHHHHHHHHHHHhcc-------cCCcC-eEEEEEeCCCCccceeEEeeEEEeccccCC--CceeecCceEEEEcCCc
Confidence 999999999999999974 15554 699999999999999999999999999986 99999999999999999
Q ss_pred cccccc-ccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHHHHH
Q 036490 246 EYKKGE-NQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIA 324 (557)
Q Consensus 246 e~~k~~-~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le~Ia 324 (557)
++++++ .+.++.+++.+++.++.+.|++++++++++|.+.|+||||++++|++.+++||.++||++++++++.+|+||+
T Consensus 232 e~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia 311 (513)
T 3iyg_B 232 DTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLA 311 (513)
T ss_pred ccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHH
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCccccCCCCCCCCCcCCccceEEEEEECceEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhC
Q 036490 325 KACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKN 404 (557)
Q Consensus 325 ~~tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~l~~ 404 (557)
++|||++++++++++++++|+ |+.|++..+|+++|++|++|.++++|||+|||+|+.+++|.||+++|||+++|+++++
T Consensus 312 ~~tGa~ii~~l~~l~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~ 390 (513)
T 3iyg_B 312 LVTGGEIASTFDHPELVKLGS-CKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKD 390 (513)
T ss_pred HHhCCEEecccccCCHhHCCc-ccEEEEEEECCeEEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceEEEeCCC
Q 036490 405 PKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNT 484 (557)
Q Consensus 405 g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~Gid~~~ 484 (557)
+++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|..++ .++|||+.+
T Consensus 391 ~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~~ 469 (513)
T 3iyg_B 391 SRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGK-TTAGLDMKE 469 (513)
T ss_pred CcEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC-CceeecCCC
Confidence 8899999999999999999998888999999999999999999999999999999999999999998765 689999999
Q ss_pred CcccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcCCc
Q 036490 485 GAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIK 527 (557)
Q Consensus 485 g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~~~ 527 (557)
|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|
T Consensus 470 g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~ 512 (513)
T 3iyg_B 470 GTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAP 512 (513)
T ss_pred CCccchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999998754
No 12
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1.6e-112 Score=923.49 Aligned_cols=526 Identities=58% Similarity=0.958 Sum_probs=492.9
Q ss_pred CCCCccccccccccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHHH
Q 036490 1 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIE 80 (557)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~ 80 (557)
|+.|+.+++++..+++|.++|.+|+.||+.|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|+++
T Consensus 1 ~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~Akll~e 80 (590)
T 3p9d_C 1 MQAPVVFMNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLE 80 (590)
T ss_dssp -----CCSCTTCCBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHHHHTHHH
T ss_pred CCCCeEeecCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhcCCChhHHHHHHHHHHHHHHHH-HHcCCChhHHHHHHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhh
Q 036490 81 LSRTQDEEVGDGTTSVIVLAGEMLHVAEEF-INKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDRATVLGLVKSCIG 159 (557)
Q Consensus 81 ~~~~~~~~~GDGttt~viL~~~Ll~~~~~l-i~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~~~~~l~~va~t~l~ 159 (557)
+|++|++++||||||++||+++||+++.++ +.+|+||+.|++||++|++.++++|+++++|++..+++.|.++|+|+|+
T Consensus 81 ~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tsls 160 (590)
T 3p9d_C 81 LSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIG 160 (590)
T ss_dssp HTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTST
T ss_pred HHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 9999999999999999999999999999999987678899999999999
Q ss_pred ccccchhHHHHHHHHHHHHhhcccccCCCc-----cccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccc
Q 036490 160 TKFTSQFGDLLADLAIDATTTVGVDLGQGL-----REVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIV 234 (557)
Q Consensus 160 sk~~~~~~~~ls~lv~~a~~~v~~~~~~g~-----~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~~ 234 (557)
||+.++|+++|++++++|+.+++++...+. .++|++++|+|++++|+++.+|++++|++|++++.++ .|+++++
T Consensus 161 SK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~-~m~~~~e 239 (590)
T 3p9d_C 161 TKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHP-KMSRHIE 239 (590)
T ss_dssp TSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCT-TSCSCEE
T ss_pred cccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCC-CCcceee
Confidence 999999999999999999999986321111 1567777899999999999999999999999999999 8999999
Q ss_pred CceEEEEecccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEec
Q 036490 235 NPRIILLDSPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRR 314 (557)
Q Consensus 235 n~~Ill~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~ 314 (557)
||||++++++|+++|++.++++.+++++++.++++.|++++++++++|.+.|++|||++++|++.+++||.++||++|++
T Consensus 240 n~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I~av~~ 319 (590)
T 3p9d_C 240 NPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGCSVLRR 319 (590)
T ss_dssp SCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTCCCCCC
T ss_pred eeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccceeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHhCCccccCCCCCCCCCcCCccceEEEEEECceEEEEEEecCCCCe-----------------------
Q 036490 315 LRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKA----------------------- 371 (557)
Q Consensus 315 v~~~~le~Ia~~tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~----------------------- 371 (557)
+++.+|+|||++|||+++++++++++++||+.|+.|++.++|++++++|++|.++..
T Consensus 320 ~~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 399 (590)
T 3p9d_C 320 VKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFI 399 (590)
T ss_dssp CCHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETTEECEEECC-----------------------------
T ss_pred CCHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchh
Confidence 999999999999999999999999999999559999999999999999999977666
Q ss_pred ---------------------------------EEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCchHHHH
Q 036490 372 ---------------------------------CTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTV 418 (557)
Q Consensus 372 ---------------------------------~TIll~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvpGGG~~e~~l 418 (557)
|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|+++
T Consensus 400 ~~~i~~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~ 479 (590)
T 3p9d_C 400 AVSAANRFKKISSSGALGSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAV 479 (590)
T ss_dssp ----------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccCCHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHH
Confidence 99999999999999999999999999999999988999999999999
Q ss_pred HHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceEEEeCCCCcccccccCccccc
Q 036490 419 SATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDA 498 (557)
Q Consensus 419 ~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~Gid~~~g~i~d~~~~gi~dp 498 (557)
+.+|++++...++++|+++++|++||+.||++|++|||+|+.+++.+|++.|..++ +++|||+.+|++.||++.|||||
T Consensus 480 s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~-~~~G~d~~~g~~~dm~~~gI~dp 558 (590)
T 3p9d_C 480 SVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGN-FTTGIDGDKGKIVDMVSYGIWEP 558 (590)
T ss_dssp HHHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSC-TTCBCCTTSSSCBCTTTTTCCEE
T ss_pred HHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-CCEeEeCCCCeEeehHHcCCeEc
Confidence 99999998888999999999999999999999999999999999999999997664 78999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhcCCcc
Q 036490 499 YNVKAQTFKTAIEAACMLLRIDDIVSGIKK 528 (557)
Q Consensus 499 ~~vk~~~l~~A~e~a~~lL~id~ii~~~~~ 528 (557)
+.||+++|+.|+|+|++|||||++|...++
T Consensus 559 ~~vk~~al~~A~e~a~~iL~id~ii~~~~~ 588 (590)
T 3p9d_C 559 EVIKQQSVKTAIESACLLLRVDDIVSGVRK 588 (590)
T ss_dssp HHHHHHHHHHHHHHHHHTTSEEEEECCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999987653
No 13
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.9e-110 Score=898.89 Aligned_cols=507 Identities=34% Similarity=0.545 Sum_probs=488.0
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHHHHHHhhhhhcCC
Q 036490 12 LKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGD 91 (557)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 91 (557)
.++++|.++|.+|+.||+.|+++||+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||
T Consensus 4 ~~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~GD 83 (518)
T 3iyg_D 4 QDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGD 83 (518)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhhCC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhccccchhHHHHH
Q 036490 92 GTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDRATVLGLVKSCIGTKFTSQFGDLLA 171 (557)
Q Consensus 92 Gttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~~~~~l~~va~t~l~sk~~~~~~~~ls 171 (557)
||||++||+++||+++.+++.+|+||+.|++||++|++.++++|+++++|++..+++.|.++|+|+++||+.+.|.++|+
T Consensus 84 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~ 163 (518)
T 3iyg_D 84 GTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLS 163 (518)
T ss_pred CceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999987678999999999999999999999999
Q ss_pred HHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCcccccCceEEEEeccccccccc
Q 036490 172 DLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGE 251 (557)
Q Consensus 172 ~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~~n~~Ill~~~~Le~~k~~ 251 (557)
+++++|+.+++....++ .+|++ +|+|+++.|++..+|++++|++|++++.| +||+.++||||++++++|++++.+
T Consensus 164 ~livdAv~~V~~~~~~~--~~d~~-~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~--~mp~~i~n~kIlll~~~Le~~k~~ 238 (518)
T 3iyg_D 164 PMSVDAVMKVIDPATAT--SVDLR-DIKIVKKLGGTIDDCELVEGLVLTQKVAN--SGITRVEKAKIGLIQFCLSAPKTD 238 (518)
T ss_pred HHHHHHHHHhhccccCC--Ccccc-eEEEEEcCCCChhhheEeccEEEeccccc--CCCccccCceEEEEEeeccccccc
Confidence 99999999997421123 46775 69999999999999999999999999998 799999999999999999999999
Q ss_pred ccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEe-----CCCCCHHHHHHHHHcCCeeEecCChhHHHHHHHH
Q 036490 252 NQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVIT-----EKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKA 326 (557)
Q Consensus 252 ~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~-----~~~i~~~al~~L~~~~I~~v~~v~~~~le~Ia~~ 326 (557)
.+.++.+++.++++.++++|++++++++++|.+.|+||||+ +++|++.+++||.++||++++++++.+|+||+++
T Consensus 239 ~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~ia~~ 318 (518)
T 3iyg_D 239 MDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKT 318 (518)
T ss_pred cCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 8999999999999999999999999999999999
Q ss_pred hCCccccCCCCCCCCCcCCccceEEEEEECc-eEEEEEEecCC-CCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhC
Q 036490 327 CGAVIVNRPDELQESDVGTGAGLFEVKKIGD-EFFAFIVDCKD-PKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKN 404 (557)
Q Consensus 327 tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~-~~~~~l~~~~~-~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~l~~ 404 (557)
|||+++++++++++++||+ |+.|++.++|+ ++|++|++|++ +++|||+|||+|+.+++|.||+++|||+++|+++++
T Consensus 319 tGa~ii~~l~~l~~~~LG~-a~~v~~~~~g~~~~~~~~~g~~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~ 397 (518)
T 3iyg_D 319 IGTKPVAHVDQFTADMLGS-AELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKK 397 (518)
T ss_pred hCCEEecccccCCHHHCCc-CcEEEEEEeCCCceEEEEECCCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999 99999999999 89999999988 899999999999999999999999999999999999
Q ss_pred CccccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceEEEeCCC
Q 036490 405 PKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNT 484 (557)
Q Consensus 405 g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~Gid~~~ 484 (557)
|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|..++ .++|||+.+
T Consensus 398 ~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~~ 476 (518)
T 3iyg_D 398 RALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGE-KTTGINVRK 476 (518)
T ss_pred CCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccC-CceeEeCCC
Confidence 9999999999999999999998888999999999999999999999999999999999999999998765 679999999
Q ss_pred CcccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcC
Q 036490 485 GAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSG 525 (557)
Q Consensus 485 g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~ 525 (557)
|++.||++.|||||+.||+++|+.|+|+|++|||||++|++
T Consensus 477 g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 517 (518)
T 3iyg_D 477 GGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNT 517 (518)
T ss_pred CcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhhcceEec
Confidence 99999999999999999999999999999999999999875
No 14
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-109 Score=895.22 Aligned_cols=508 Identities=34% Similarity=0.549 Sum_probs=487.8
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHHHHHHhhhhhcCC
Q 036490 12 LKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGD 91 (557)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 91 (557)
..+++|.++|.+|+.||+.|+++||+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~GD 82 (515)
T 3iyg_E 3 KSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGD 82 (515)
T ss_pred chhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhhCC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCC--CcHHHHHHHHHHhhhccccchhHHH
Q 036490 92 GTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDA--NDRATVLGLVKSCIGTKFTSQFGDL 169 (557)
Q Consensus 92 Gttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~--~~~~~l~~va~t~l~sk~~~~~~~~ 169 (557)
||||++||+++||+++.+++.+|+||+.|++||+.|++.++++|+++++|++. .+++.|.++|+|+++||+.+.+.+.
T Consensus 83 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~ 162 (515)
T 3iyg_E 83 GTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQ 162 (515)
T ss_pred chhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchhHHHHH
Confidence 99999999999999999999999999999999999999999999999998854 4578999999999999998889999
Q ss_pred HHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCcccccCceEEEEeccccccc
Q 036490 170 LADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKK 249 (557)
Q Consensus 170 ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~~n~~Ill~~~~Le~~k 249 (557)
|++++++|+..+... ...++|++ +|+|++++|+++++|++++|++|++++.|| .|++.++||+|+++++++++.+
T Consensus 163 l~~l~~dav~~V~~~---~~~~~d~~-~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~-~m~~~~~~~kIall~~~le~~k 237 (515)
T 3iyg_E 163 MAEIAVNAVLTVADM---QRRDVDFE-LIKVEGKVGGRLEDTKLIKGVIVDKDFSHP-QMPKQVEDAKIAILTCPFEPPK 237 (515)
T ss_pred HHHHHHHHHHhhccc---ccCCCCcc-cEEEEEecCCCcccceEEeeEEEecccccc-cccccCCCceEEEEcCcccccc
Confidence 999999999998642 12346664 699999999999999999999999999999 8999999999999999999999
Q ss_pred ccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHHHHHHHhCC
Q 036490 250 GENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGA 329 (557)
Q Consensus 250 ~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le~Ia~~tGa 329 (557)
++.++++.+++.+++..+.++|+++++++++++.+.|+||||++++|++.+++||.++||++++++++.+|+||+++|||
T Consensus 238 ~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tGa 317 (515)
T 3iyg_E 238 PKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATGG 317 (515)
T ss_pred ccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCcCCccceEEEEEECc--eEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhCCcc
Q 036490 330 VIVNRPDELQESDVGTGAGLFEVKKIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKL 407 (557)
Q Consensus 330 ~iis~~~~l~~~~lG~~~~~v~~~~ig~--~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~l~~g~v 407 (557)
++++++++++++++|+ |+.|+++++|+ ++|++|++|.++..|||+|||+|+.+++|.||+++|||+++|+++++|++
T Consensus 318 ~ii~~l~~l~~~~LG~-a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~i 396 (515)
T 3iyg_E 318 RIVPRFSELTAEKLGF-AGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRV 396 (515)
T ss_pred EEecccccCCHHHCCc-ceEEEEEEeccccceEEEEEcCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999 99999999997 89999999999999999999999999999999999999999999999999
Q ss_pred ccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceEEEeCCCCcc
Q 036490 408 VPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAI 487 (557)
Q Consensus 408 vpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~Gid~~~g~i 487 (557)
|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|..+.+.++|||+.+|++
T Consensus 397 VpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~ 476 (515)
T 3iyg_E 397 VYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGT 476 (515)
T ss_pred CCCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcc
Confidence 99999999999999999998889999999999999999999999999999999999999999975444789999999999
Q ss_pred cccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcC
Q 036490 488 SDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSG 525 (557)
Q Consensus 488 ~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~ 525 (557)
.||++.|||||+.||+++|+.|+|+|++|||||++|++
T Consensus 477 ~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 477 NDMKHQHVIETLIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred cchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 99999999999999999999999999999999999975
No 15
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.7e-110 Score=896.16 Aligned_cols=503 Identities=28% Similarity=0.547 Sum_probs=484.5
Q ss_pred ccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHHHHHHhhhhhcCCC
Q 036490 13 KRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDG 92 (557)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDG 92 (557)
...+|.+++.+|+.||+.|+++||+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++|||
T Consensus 4 ~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~GDG 83 (517)
T 3iyg_Z 4 EVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDG 83 (517)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCCC
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhccccchhHHHHHH
Q 036490 93 TTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDRATVLGLVKSCIGTKFTSQFGDLLAD 172 (557)
Q Consensus 93 ttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~~~~~l~~va~t~l~sk~~~~~~~~ls~ 172 (557)
|||++||+++||+++.+++++|+||+.|++||++|++.++++|++++++++. +++.|.++++|+++||+.+.+.++|++
T Consensus 84 TTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-~~~~L~~va~tsl~sKi~~~~~d~la~ 162 (517)
T 3iyg_Z 84 TTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEM-DRETLIDVARTSLRTKVHAELADVLTE 162 (517)
T ss_pred ceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCC-CHHHHHHHHHHHhccccchhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999875 788999999999999999999999999
Q ss_pred HHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCcccccCceEEEEecccccccccc
Q 036490 173 LAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGEN 252 (557)
Q Consensus 173 lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~~n~~Ill~~~~Le~~k~~~ 252 (557)
++++|+..+.. +...+|++ +|+|++++|+...+|++++|++|++++.|| .|+++++||+|++++++|++++++.
T Consensus 163 l~vdaV~~V~~----~~~~~dl~-~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p-~m~~~ien~kIll~~~~le~~k~e~ 236 (517)
T 3iyg_Z 163 AVVDSILAIKK----QDEPIDLF-MVEIMEMKHKSETDTSLIRGLVLDHGARHP-DMKKRVEDAYILTCNVSLEYEKTEV 236 (517)
T ss_pred HHHHHhheecc----CCCcCChh-HheeeeecCCCccccceEeeEEEeccCCCC-CccccccCCeEEEeccccccccccc
Confidence 99999999863 22357776 699999999999999999999999999999 8999999999999999999999999
Q ss_pred cceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCc---------EEEeCCCCCHHHHHHHHHcCCeeEecCChhHHHHH
Q 036490 253 QTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPD---------LVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRI 323 (557)
Q Consensus 253 ~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~---------lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le~I 323 (557)
+.++.++++++++++.++|++++++.+++|...+++ |||++++|++.+++||.++||++++++++.+|+||
T Consensus 237 ~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~leri 316 (517)
T 3iyg_Z 237 NSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNMERL 316 (517)
T ss_pred ceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCCCEEEEecCHHHHHHH
Confidence 999999999999999999999999999999988876 58999999999999999999999999999999999
Q ss_pred HHHhCCccccCCCCCCCCC-cCCccceEEEEEECceEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHH
Q 036490 324 AKACGAVIVNRPDELQESD-VGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNII 402 (557)
Q Consensus 324 a~~tGa~iis~~~~l~~~~-lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~l 402 (557)
+++|||+++++++++++++ ||+ |+ |++.++|+++|++|++|.+++.|||+|||+|+.+++|.||+++|||+++|+++
T Consensus 317 a~~tGa~iv~~l~~l~~~~~LG~-a~-v~e~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av 394 (517)
T 3iyg_Z 317 TLACGGIALNSLDDLNPDCLLGH-AG-VYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAI 394 (517)
T ss_pred HHHhCCEEecchhhCcccccCCc-ce-EEEEEEcCceEEEEeCCCCchhheeeecCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 999 99 99999999999999999999999999999999999999999999999999999
Q ss_pred hCCccccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceEEEeC
Q 036490 403 KNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDG 482 (557)
Q Consensus 403 ~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~Gid~ 482 (557)
++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.+|++|++|||+|+.+++.+|++.|..++ .++|||+
T Consensus 395 ~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~ 473 (517)
T 3iyg_Z 395 DDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESG-QLVGVDL 473 (517)
T ss_pred hcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-CcEEEeC
Confidence 999999999999999999999999888999999999999999999999999999999999999999997665 7899999
Q ss_pred CCCcccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcC
Q 036490 483 NTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSG 525 (557)
Q Consensus 483 ~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~ 525 (557)
.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|.+
T Consensus 474 ~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 474 NTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMRA 516 (517)
T ss_pred CCCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999865
No 16
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=2.8e-110 Score=906.99 Aligned_cols=521 Identities=31% Similarity=0.522 Sum_probs=489.8
Q ss_pred CCCccccccc--cccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHH
Q 036490 2 HSPVLVLKDS--LKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMI 79 (557)
Q Consensus 2 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~ 79 (557)
++|+.+++++ .+..+|.++|.+|+.||+.|+++||+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++
T Consensus 26 ~~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~ 105 (562)
T 3p9d_E 26 GRPFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLV 105 (562)
T ss_dssp ----CCCSSBCCCSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHHHHHHH
T ss_pred CCCeEEeccCCcceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHHHHHHH
Confidence 4566666665 36678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCCCc----HHHHHHHHH
Q 036490 80 ELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDAND----RATVLGLVK 155 (557)
Q Consensus 80 ~~~~~~~~~~GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~~----~~~l~~va~ 155 (557)
++|++|++++||||||++||+++||+++.+++.+|+||+.|++||+.|++.++++|++++++++..+ ++.|.++|+
T Consensus 106 e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~ 185 (562)
T 3p9d_E 106 QLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAK 185 (562)
T ss_dssp HHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHH
T ss_pred HHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999987532 278999999
Q ss_pred HhhhccccchhHHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCcccc--
Q 036490 156 SCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKI-- 233 (557)
Q Consensus 156 t~l~sk~~~~~~~~ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~-- 233 (557)
|+++||+.+.+.++|++++++|+..+... ...++|++ +|+|++++|+++++|++++|++|++++.|| .|++.+
T Consensus 186 tSl~sK~i~~~~d~la~l~vdAV~~V~~~---~~~~~d~~-~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp-~m~~~~~~ 260 (562)
T 3p9d_E 186 TSLGSKIVSKDHDRFAEMAVEAVINVMDK---DRKDVDFD-LIKMQGRVGGSISDSKLINGVILDKDFSHP-QMPKCVLP 260 (562)
T ss_dssp HHHSSSTTTTTHHHHHHHHHHHHHTSSTT---TCSCCCCC-CCEEEEESSSCGGGCEEESSEEESSCCCTT-SCCC----
T ss_pred HhcCCchhHHHHHHHHHHHHHHheeeccc---ccCCCCcc-cEEEEEecCCChhhhceeeeEEEecCCCCC-CcCccccc
Confidence 99999999999999999999999998642 12357775 699999999999999999999999999999 899998
Q ss_pred ----cCceEEEEecccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCC
Q 036490 234 ----VNPRIILLDSPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGV 309 (557)
Q Consensus 234 ----~n~~Ill~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I 309 (557)
+|++|+++++++++.+++.++++.+++.+++..+.++|++++++++++|.+.|++|||++++|++.+++||.++||
T Consensus 261 ~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I 340 (562)
T 3p9d_E 261 KEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDL 340 (562)
T ss_dssp -TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTC
T ss_pred ccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEecCChhHHHHHHHHhCCccccCCCCCCCCCcCCccceEEEEEECc--eEEEEEEecCCCCeEEEEEccCCHHHHHHH
Q 036490 310 SAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNEV 387 (557)
Q Consensus 310 ~~v~~v~~~~le~Ia~~tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~--~~~~~l~~~~~~~~~TIll~G~t~~~l~e~ 387 (557)
++++++++.+|+||+++|||+++++++++++++||+ |+.|+++++|+ ++|++|++|.+++.|||+|||+|+.+++|.
T Consensus 341 ~~v~~v~k~~le~ia~~TGa~iis~l~~l~~~~LG~-a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~te~~l~E~ 419 (562)
T 3p9d_E 341 PAVRWVGGQELEHIAISTNGRIVPRFQDLSKDKLGT-CSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEA 419 (562)
T ss_dssp CCEECCCTTTHHHHHHHHCCCEEESSSCCCTTSCEE-CSCEEEECCSSSSCCEEEECCCSCCSCCEEEEECTTTTTHHHH
T ss_pred EEEeccCHHHHHHHHHHhCCEEEeccccCCHHHCCc-ceEEEEEEeccCCceEEEEecCCCCCeEEEEEeCCCHHHHHHH
Confidence 999999999999999999999999999999999999 99999999985 899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCccccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHH
Q 036490 388 ERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQ 467 (557)
Q Consensus 388 ~~~l~dal~~~~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~ 467 (557)
||+++|||+++|+++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+
T Consensus 420 kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~ 499 (562)
T 3p9d_E 420 ERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLK 499 (562)
T ss_dssp THHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred HHhhCCCCceEEEeCCCCcccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcCCcc
Q 036490 468 GKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKK 528 (557)
Q Consensus 468 ~~~~~~~~~~~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~~~~ 528 (557)
+.|..+.+.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...+.
T Consensus 500 ~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 500 SKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIISGKD 560 (562)
T ss_dssp HHHHHTTTSSBCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC-
T ss_pred HHHhhcCCCceeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9987543478999999999999999999999999999999999999999999999987554
No 17
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=5e-111 Score=907.58 Aligned_cols=513 Identities=30% Similarity=0.514 Sum_probs=492.9
Q ss_pred ccccccccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHHHHHHhhh
Q 036490 7 VLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQD 86 (557)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~~~~~~~ 86 (557)
-++.+.+.++|.++|.+|+.||+.|+++||+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|+
T Consensus 7 ~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd 86 (528)
T 3p9d_D 7 SNATFKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQD 86 (528)
T ss_dssp CCCSSCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTTHHHHHHHHHHHH
T ss_pred cccccchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHHHHHHHHHHHHhh
Confidence 34566678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhccccchh
Q 036490 87 EEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDRATVLGLVKSCIGTKFTSQF 166 (557)
Q Consensus 87 ~~~GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~~~~~l~~va~t~l~sk~~~~~ 166 (557)
+++||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++++|++..+++.|.++|+|+++||+.++|
T Consensus 87 ~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~ 166 (528)
T 3p9d_D 87 SEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVSQY 166 (528)
T ss_dssp HHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTT
T ss_pred hhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccchh
Confidence 99999999999999999999999999999999999999999999999999999999877899999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCcccccCceEEEEecccc
Q 036490 167 GDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLE 246 (557)
Q Consensus 167 ~~~ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~~n~~Ill~~~~Le 246 (557)
+++|++++++|+.+++.. .++ .+|++ +|+|++++|+++++|++++|++|++++.||..|+++++||||++++++|+
T Consensus 167 ~~~i~~livdAv~~V~~~-~~~--~i~v~-~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~m~~~ien~kIll~~~~le 242 (528)
T 3p9d_D 167 SSFLAPLAVDSVLKISDE-NSK--NVDLN-DIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQIS 242 (528)
T ss_dssp HHHHHHHHHHHHHTTCCT-TTT--CCCGG-GSBCCCCCSSCSCCCEEESSCBCCCCCCCSSSCCSEESSEEEEEECCCSS
T ss_pred HHHHHHHHHHHHHHhccc-cCC--ccceE-EEEEEEecCCCccceEEEeeeEEeecccCcccCcccccCceEEEEecccc
Confidence 999999999999999852 123 47776 59999999999999999999999999999933999999999999999999
Q ss_pred cccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCC-----CHHHHHHHHHcCCeeEecCChhHHH
Q 036490 247 YKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGL-----SDLACHYLSKAGVSAIRRLRKTDNN 321 (557)
Q Consensus 247 ~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i-----~~~al~~L~~~~I~~v~~v~~~~le 321 (557)
+++++.++++.+++.++++.+.++|++++++++++|.+.|+||||++++| ++.+++||.++||++++++++.+|+
T Consensus 243 ~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~~~~k~~le 322 (528)
T 3p9d_D 243 PPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDIEREEIE 322 (528)
T ss_dssp CCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEECCCTHHHH
T ss_pred ccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHhCCccccCCCCCCCCCcCCccceEEEEEECceEEEEEEecC--C-CCeEEEEEccCCHHHHHHHHHHHHHHHHHH
Q 036490 322 RIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCK--D-PKACTVLLRGASKDLLNEVERNLQDAMSVA 398 (557)
Q Consensus 322 ~Ia~~tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~--~-~~~~TIll~G~t~~~l~e~~~~l~dal~~~ 398 (557)
||+++|||+++++++++++++||+ |+.|++.++|+++|.+|++|+ + +++|||+|||+|+.+++|.||+++|||+++
T Consensus 323 ~ia~~tGa~ii~~~~~l~~~~LG~-a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~ 401 (528)
T 3p9d_D 323 FLSKGLGCKPIADIELFTEDRLDS-ADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALCVI 401 (528)
T ss_dssp HHHHHHTCCCCSCSTTCCSSSEEE-ESCEECCEETTEECCBCTTBCCGGGCCCCEEECCCSSTTHHHHHHHHHTTTHHHH
T ss_pred HHHHHHCCEEecccccCCHHHCCc-ccEEEEEEECCEEEEEEEcccccCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 999999999999999999998 6 899999999999999999999999999999
Q ss_pred HHHHhCCccccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceE
Q 036490 399 RNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWI 478 (557)
Q Consensus 399 ~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~ 478 (557)
|+++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..++ .++
T Consensus 402 r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~-~~~ 480 (528)
T 3p9d_D 402 RCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGE-LND 480 (528)
T ss_dssp HHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSS-CCC
T ss_pred HHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccC-Ccc
Confidence 9999999999999999999999999998888899999999999999999999999999999999999999887665 789
Q ss_pred EEeCCCCcccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcC
Q 036490 479 GIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSG 525 (557)
Q Consensus 479 Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~ 525 (557)
|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|..
T Consensus 481 G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 527 (528)
T 3p9d_D 481 GISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDIAFS 527 (528)
T ss_dssp CCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCSCCCBC
T ss_pred ceecCCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhhhHheec
Confidence 99999999999999999999999999999999999999999999875
No 18
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=9.9e-111 Score=911.61 Aligned_cols=519 Identities=27% Similarity=0.459 Sum_probs=479.3
Q ss_pred ccccccccccccc-hHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHHHHHH
Q 036490 5 VLVLKDSLKRESG-TKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSR 83 (557)
Q Consensus 5 ~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~~~~ 83 (557)
..++++++++++| +++|.+|+.||+.|+++||+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|+
T Consensus 11 ~~~l~~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~a~ 90 (568)
T 3p9d_H 11 AGLFKQGYNSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPAVKVLVMATE 90 (568)
T ss_dssp CSSCCSSCCBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHHHHHHHHHHH
T ss_pred hhhhhcCccccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHH
Confidence 3688999999999 679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccC--CCCcHHHHHHHHHHhhhcc
Q 036490 84 TQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPI--DANDRATVLGLVKSCIGTK 161 (557)
Q Consensus 84 ~~~~~~GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i--~~~~~~~l~~va~t~l~sk 161 (557)
+|++++||||||++||+++||+++.+++.+|+||+.|++||+.|++.++++|+++++++ +..+++.|.++++|+++||
T Consensus 91 ~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK 170 (568)
T 3p9d_H 91 QQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSK 170 (568)
T ss_dssp HHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTT
T ss_pred hhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999876 4357889999999999999
Q ss_pred ccchhHHHHHHHHHHHHhhcccccC--CCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccc---Cc
Q 036490 162 FTSQFGDLLADLAIDATTTVGVDLG--QGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIV---NP 236 (557)
Q Consensus 162 ~~~~~~~~ls~lv~~a~~~v~~~~~--~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~~---n~ 236 (557)
+.+++ ++|++++++|+.+++++.. .+...+|++ +|+|++++|+++++|++++|++|++++. .|+++++ ||
T Consensus 171 ~~~~~-~~i~~livdAv~~V~~~~~~~~~~~~~dl~-~I~I~k~~Ggs~~dS~lv~G~v~dk~~~---~m~~~i~~~~n~ 245 (568)
T 3p9d_H 171 KYGSE-DILSELVSEAVSHVLPVAQQAGEIPYFNVD-SIRVVKIMGGSLSNSTVIKGMVFNREPE---GHVKSLSEDKKH 245 (568)
T ss_dssp STTCH-HHHHHHHHHHHTTSCC---------CCCGG-GCEEEEEESSCGGGCEEESSCCBSSCBS---SGGGSCCCCSSC
T ss_pred CcchH-HHHHHHHHHHHHHHhhccccccCCcccccc-eEEEEEccCCCcchheeeccEEEeeccc---CCcEEEecCCcc
Confidence 98877 9999999999999975210 132457875 6999999999999999999999999874 6899999 99
Q ss_pred eEEEEecccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCC
Q 036490 237 RIILLDSPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLR 316 (557)
Q Consensus 237 ~Ill~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~ 316 (557)
||++++++|++++++.++++.+++.+++..+.++|++++++++++|.+.|+||||++++|++.+++||.++||+++++++
T Consensus 246 kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~gI~av~~v~ 325 (568)
T 3p9d_H 246 KVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYGILVLKVPS 325 (568)
T ss_dssp EEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHTCEEECCCC
T ss_pred eEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCCeEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhCCccccCCCCCCCCCcCCccceEEEEEECceEEEEEEecC--CCCeEEEEEccCCHHHHHHHHHHHHHH
Q 036490 317 KTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCK--DPKACTVLLRGASKDLLNEVERNLQDA 394 (557)
Q Consensus 317 ~~~le~Ia~~tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~--~~~~~TIll~G~t~~~l~e~~~~l~da 394 (557)
+.+|+||+++|||+++++++++++++||+ |+.|++.++|+++|++|++|. ++++|||+|||+|+.+++|.||+++||
T Consensus 326 ~~~leria~~tGa~ivs~l~~l~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~l~~~~~TIllrG~t~~~l~E~er~i~DA 404 (568)
T 3p9d_H 326 KFELRRLCRVCGATPLPRLGAPTPEELGL-VETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGATQNNLDDIERAIDDG 404 (568)
T ss_dssp HHHHHHHHHHHSCCCCSSSSCCCGGGCEE-CSCCCCCEETTEECBCCCCCSSSCCSSCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEeccccCCHHHCCc-ceEEEEEEecCceEEEEecCCCCCCCeEEEEECCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 999999999999999999998 799999999999999999999999999
Q ss_pred HHHHHHHHh--CCccccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhC
Q 036490 395 MSVARNIIK--NPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHAN 472 (557)
Q Consensus 395 l~~~~~~l~--~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~ 472 (557)
|+++|++++ ++++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..
T Consensus 405 L~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~ 484 (568)
T 3p9d_H 405 VAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNV 484 (568)
T ss_dssp HHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCC
T ss_pred HHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhh
Confidence 999999999 888999999999999999999998899999999999999999999999999999999999999998865
Q ss_pred -------CCCceEEEeCCCCc---ccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcCCccC
Q 036490 473 -------GENAWIGIDGNTGA---ISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK 529 (557)
Q Consensus 473 -------~~~~~~Gid~~~g~---i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~~~~~ 529 (557)
++++++|||+.+|+ +.||++.|||||+.||+++|+.|+|+|++|||||++|...+..
T Consensus 485 ~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~ 551 (568)
T 3p9d_H 485 TEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAKKAG 551 (568)
T ss_dssp SSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC-------------
T ss_pred hcccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhccccC
Confidence 12367999999997 9999999999999999999999999999999999999876553
No 19
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=7.2e-110 Score=902.93 Aligned_cols=517 Identities=26% Similarity=0.472 Sum_probs=490.8
Q ss_pred CccccccccccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHHHHHH
Q 036490 4 PVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSR 83 (557)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~~~~ 83 (557)
.+.+++++.+.++|.+++.+|+.||+.|+++||+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|+
T Consensus 2 ~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~ 81 (546)
T 3p9d_F 2 SLQLLNPKAESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPTAVLIARAAA 81 (546)
T ss_dssp CCCSSCTTEEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHHHHHHHHHHH
T ss_pred cccccCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHH
Confidence 34567888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCC--CcHHHHHHHHHHhhhcc
Q 036490 84 TQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDA--NDRATVLGLVKSCIGTK 161 (557)
Q Consensus 84 ~~~~~~GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~--~~~~~l~~va~t~l~sk 161 (557)
+|++++||||||++||+++||+++.+++++|+||+.|++||+.|++.++++|++++++++. .+++.|.++|+|+++||
T Consensus 82 ~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sK 161 (546)
T 3p9d_F 82 AQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTK 161 (546)
T ss_dssp HHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCST
T ss_pred HHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999999999999999998864 46889999999999999
Q ss_pred ccchhHHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCcccccCceEEEE
Q 036490 162 FTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILL 241 (557)
Q Consensus 162 ~~~~~~~~ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~~n~~Ill~ 241 (557)
+.+.|.++|++++++|+..+... ++ .++|++ +|+|++++|+...+|++++|++|++++.|| .|+++++||||+++
T Consensus 162 i~~~~~d~la~l~vdaV~~V~~~--~~-~~~dl~-~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~-~m~~~~en~kIll~ 236 (546)
T 3p9d_F 162 VDADLTEVLTPIVTDAVLSVYDA--QA-DNLDLH-MVEIMQMQHLSPKDTTFIKGLVLDHGGRHP-DMPTRVKNAYVLIL 236 (546)
T ss_dssp THHHHCSSHHHHHHHHHHHTHHH--HH-TTCCGG-GEEEECCCCSCTTTCCCCSSCEESCCCCSS-SSCSSBCSCCCCEE
T ss_pred cchhHHHHHHHHHHHhheEeecC--CC-Ccccch-heEEEEecCCCccccEEEeeEEEecccccc-cCcceecCceEEEe
Confidence 99999999999999999998632 11 257776 699999999999999999999999999999 89999999999999
Q ss_pred ecccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcC----------CcEEEeCCCCCHHHHHHHHHcCCee
Q 036490 242 DSPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFK----------PDLVITEKGLSDLACHYLSKAGVSA 311 (557)
Q Consensus 242 ~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~----------~~lIi~~~~i~~~al~~L~~~~I~~ 311 (557)
+|+|++++++.++++.+++++++..+++.|++++++.+++|...+ ++||+++++|++.+++||.++||++
T Consensus 237 ~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~~ 316 (546)
T 3p9d_F 237 NVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILA 316 (546)
T ss_dssp CCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTCEE
T ss_pred cCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCee
Confidence 999999999999999999999999999999999999999998754 3499999999999999999999999
Q ss_pred EecCChhHHHHHHHHhCCccccCCCCCCCCCcCCccceEEEEEECceEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHH
Q 036490 312 IRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNL 391 (557)
Q Consensus 312 v~~v~~~~le~Ia~~tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l 391 (557)
++++++.+|+||+++|||+++++++++++++||+ |+.|+++++|+++|++|++|.++..|||+|||+|+.+++|.||++
T Consensus 317 vr~v~~~~leria~~tGa~ii~~l~~l~~~~LG~-a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~l 395 (546)
T 3p9d_F 317 LRRAKRRNMERLQLVTGGEAQNSVEDLSPQILGF-SGLVYQETIGEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAV 395 (546)
T ss_dssp ECCCCHHHHHHHHHTTTBCCCCCCSSCSTTCCBC-CCCBCBCCCSSCCCEECSSCSCCSCEEEECCCSCHHHHHHHHHHH
T ss_pred EecCCHHHHHHHHHHhCCEEecchhhCCHhHCCc-ccEEEEEEecCceEEEEecCCCCceEEEEECCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCccccCCCchHHHHHHHHHH---hhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHH
Q 036490 392 QDAMSVARNIIKNPKLVPGGGATELTVSATLKQ---KSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQG 468 (557)
Q Consensus 392 ~dal~~~~~~l~~g~vvpGGG~~e~~l~~~L~~---~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~ 468 (557)
+|||+++|+++++|++|||||++|++++.+|++ ++...++++|+++++|++||+.||++|++|||+|+.+++.+|++
T Consensus 396 ~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~ 475 (546)
T 3p9d_F 396 RDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVED 475 (546)
T ss_dssp HHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 999999999999999999999999999999998 57888999999999999999999999999999999999999999
Q ss_pred HhhC-----CCCceEEEeCCCCcccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcCCc
Q 036490 469 KHAN-----GENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIK 527 (557)
Q Consensus 469 ~~~~-----~~~~~~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~~~ 527 (557)
.|.. ++ .++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|.+.+
T Consensus 476 ~h~~~~~~~~~-~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~ 538 (546)
T 3p9d_F 476 ELDDAQDSDET-RYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAGR 538 (546)
T ss_dssp HHHHHTTSTTS-SCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC
T ss_pred HhhhhhcccCC-ceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 8862 33 6799999999999999999999999999999999999999999999998744
No 20
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.9e-107 Score=877.07 Aligned_cols=505 Identities=30% Similarity=0.457 Sum_probs=481.8
Q ss_pred cccccccc-hHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChHHHHHHHHHHhhhhh
Q 036490 10 DSLKRESG-TKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEE 88 (557)
Q Consensus 10 ~~~~~~~~-~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~~~~~~~~~ 88 (557)
+++++++| ++++.+|+.||+.|+++||+||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|+++
T Consensus 1 ~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~ 80 (512)
T 3iyg_Q 1 EGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQE 80 (512)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhhhh
Confidence 46778899 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccc--cCCCCcHHHHHHHHHHhhhccccchh
Q 036490 89 VGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAM--PIDANDRATVLGLVKSCIGTKFTSQF 166 (557)
Q Consensus 89 ~GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~--~i~~~~~~~l~~va~t~l~sk~~~~~ 166 (557)
+||||||++||+++||+++.+++.+|+||+.|++||++|++.++++|+++++ +.+..+++.|.++|+|+++||+.+ +
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~-~ 159 (512)
T 3iyg_Q 81 VGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYG-N 159 (512)
T ss_pred hCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCcc-c
Confidence 9999999999999999999999999999999999999999999999999854 445558899999999999999865 7
Q ss_pred HHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCcccccCceEEEEecccc
Q 036490 167 GDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLE 246 (557)
Q Consensus 167 ~~~ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~~n~~Ill~~~~Le 246 (557)
+++|++++++|+.+++++ ++ .+|++ +|+|.+..|+++.+|++++|++|++++.+ |++.++||+|++++++++
T Consensus 160 ~~~i~~livdAv~~V~~~--~~--~i~v~-~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~---~~~~~~n~kI~ll~~~le 231 (512)
T 3iyg_Q 160 EVFLAKLIAQACVSIFPD--SG--HFNVD-NIRVCKILGSGVHSSSVLHGMVFKKETEG---DVTSVKDAKIAVYSCPFD 231 (512)
T ss_pred hHHHHHHHHHHHHHHhcc--CC--cccHh-HeeEeeccCCCcccceEEeeEEEecCcCC---CCcccccCceEEEecccc
Confidence 899999999999999852 23 46776 69999999999999999999999999864 899999999999999999
Q ss_pred cccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHHHHHHH
Q 036490 247 YKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKA 326 (557)
Q Consensus 247 ~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le~Ia~~ 326 (557)
+.+++.+.++.+++.+++.++.+.|++++++++++|.+.|++||+++++|++.+++||.++||++++++++.+|+||+++
T Consensus 232 ~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~~ 311 (512)
T 3iyg_Q 232 GMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKT 311 (512)
T ss_pred cccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCccccCCCCCCCCCcCCccceEEEEEECceEEEEEEecC-CCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhCC
Q 036490 327 CGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCK-DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNP 405 (557)
Q Consensus 327 tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~-~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~l~~g 405 (557)
|||+++++++++++++||+ |+.|++.++|+++|++|++|+ .+++|||+|||+|+.+++|.||+++|||+++|+++++|
T Consensus 312 tGa~iis~l~~~~~~~LG~-a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~ 390 (512)
T 3iyg_Q 312 VGATALPRLNPPVLEEMGH-CDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDK 390 (512)
T ss_pred hCCEEecccccCCHHHCCc-ccEEEEEEeCCeEEEEEEcccCCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999 999999999999999999996 58899999999999999999999999999999999999
Q ss_pred ccccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceEEEeCCCC
Q 036490 406 KLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTG 485 (557)
Q Consensus 406 ~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~Gid~~~g 485 (557)
++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|..++ +++|||+.+|
T Consensus 391 ~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~~~ 469 (512)
T 3iyg_Q 391 RLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGN-KNVGLDIEAE 469 (512)
T ss_pred CEecCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC-CcEEEecCCC
Confidence 999999999999999999998888999999999999999999999999999999999999999998765 7899999965
Q ss_pred --cccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcC
Q 036490 486 --AISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSG 525 (557)
Q Consensus 486 --~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~ 525 (557)
++.||++.|||||+.||+++|+.|+|+|++|||||++|.+
T Consensus 470 ~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~ 511 (512)
T 3iyg_Q 470 VPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIMA 511 (512)
T ss_pred CCcccchHhccCeEcHHHHHHHHHHHHHHHHHHHhHhHheec
Confidence 9999999999999999999999999999999999999975
No 21
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=1.1e-109 Score=898.82 Aligned_cols=515 Identities=30% Similarity=0.476 Sum_probs=488.2
Q ss_pred CccccccccccccchHHHHHHHHHHHHHHHHhhhcCCcccccceeec-CCCCEEEeccHHHHhhhccccChHHHHHHHHH
Q 036490 4 PVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLD-ASGGIVVTNDGNAILRELDVAHPAAKSMIELS 82 (557)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~-~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~~~ 82 (557)
.+.+++++....+|.++|.+|+.||+.|+++||+||||+||+|||++ +.|+++|||||+|||++|+++||+|+|++++|
T Consensus 2 ~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~Akll~e~a 81 (527)
T 3p9d_B 2 SVQIFGDQVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNIS 81 (527)
T ss_dssp -CCSSCSCEEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHHHHHHHHHH
T ss_pred ceehhcCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999 89999999999999999999999999999999
Q ss_pred HhhhhhcCCChhHHHHHHHHHHHHHHHHHHc-CCChhHHHHHHHHHHHHHHHHHhhccccCCCCc---HHHHHHHHHHhh
Q 036490 83 RTQDEEVGDGTTSVIVLAGEMLHVAEEFINK-NYHPTVICRAYNKALEDAVAVLDTIAMPIDAND---RATVLGLVKSCI 158 (557)
Q Consensus 83 ~~~~~~~GDGttt~viL~~~Ll~~~~~li~~-gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~~---~~~l~~va~t~l 158 (557)
++|++++||||||++||+++||+++.+++.+ |+||+.|++||++|++.++++|++++++++..+ ++.|.++|+|++
T Consensus 82 ~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl 161 (527)
T 3p9d_B 82 KVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTL 161 (527)
T ss_dssp HHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhcc
Confidence 9999999999999999999999999999999 999999999999999999999999999987532 789999999999
Q ss_pred hccccchhHHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCcccccCceE
Q 036490 159 GTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRI 238 (557)
Q Consensus 159 ~sk~~~~~~~~ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~~~~~~~~~n~~I 238 (557)
+||+.+.|+++|++++++|+.+++. ++ |++ +|+|+++.|+...+|++++|++|++++.++ . |++++||||
T Consensus 162 ~sK~~~~~~~~i~~li~dAv~~V~~---~~----~~~-~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~-~-p~~~~n~kI 231 (527)
T 3p9d_B 162 SSKILSQDKDHFAELATNAILRLKG---ST----NLE-HIQIIKILGGKLSDSFLDEGFILAKKFGNN-Q-PKRIENAKI 231 (527)
T ss_dssp TTSGGGGGHHHHHHHHHHHHHTTCT---TC----CTT-SSCCCBCCCSSSSCCCEESSCCCSCCCSSS-C-CSCCSSCEE
T ss_pred ccCcccchHHHHHHHHHHHHHHhcc---cC----Ccc-eEEEEEcCCCCccccEEEEeEEEecccCCC-C-CeeeecceE
Confidence 9999999999999999999999985 22 332 599999999999999999999999999998 4 889999999
Q ss_pred EEEeccccccccc-ccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCCh
Q 036490 239 ILLDSPLEYKKGE-NQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRK 317 (557)
Q Consensus 239 ll~~~~Le~~k~~-~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~ 317 (557)
++++++|++++++ ++.++.+++++++..+.++|++++++++++|.+.|++||+++++|++.+++||.++||++++++++
T Consensus 232 lll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~ 311 (527)
T 3p9d_B 232 LIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADF 311 (527)
T ss_dssp EEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHH
T ss_pred EEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCH
Confidence 9999999999998 588889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCccccCCCCCCCCCcCCccceEEEEEECceEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHH
Q 036490 318 TDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSV 397 (557)
Q Consensus 318 ~~le~Ia~~tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~ 397 (557)
.+|+||+++||++++++++++++++||+ |+.|+++.+|+++|++|++|.++++|||+|||+|+.+++|.||+++|||++
T Consensus 312 ~dle~ia~~tGa~iv~~~~~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~ 390 (527)
T 3p9d_B 312 EGVERLALVTGGEVVSTFDEPSKCKLGE-CDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSV 390 (527)
T ss_dssp HHHHHHHHHTCCCCCSTTSCCTTSCEEC-SBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHhCCEEecchhhCCHHHCCC-CcEEEEEEecceEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCccccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCce
Q 036490 398 ARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAW 477 (557)
Q Consensus 398 ~~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~ 477 (557)
+|+++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|..++ .+
T Consensus 391 ~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~-~~ 469 (527)
T 3p9d_B 391 LSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGI-ST 469 (527)
T ss_dssp HHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTC-SC
T ss_pred HHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCC-Cc
Confidence 99999999999999999999999999998888999999999999999999999999999999999999999987664 67
Q ss_pred EEEeCCCCcccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcCCccCC
Q 036490 478 IGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ 530 (557)
Q Consensus 478 ~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~~~~~~ 530 (557)
+|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|++.
T Consensus 470 ~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~ 522 (527)
T 3p9d_B 470 SGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIRARPRTA 522 (527)
T ss_dssp CCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHCCEEEEEC----
T ss_pred eeEECCCCCCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999998866543
No 22
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=5.6e-103 Score=840.47 Aligned_cols=481 Identities=35% Similarity=0.613 Sum_probs=387.2
Q ss_pred eeecCCCCEEEeccHHHHhhhccccChHHHHHHHHHHhhhhhcCCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHH
Q 036490 47 MLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNK 126 (557)
Q Consensus 47 ~i~~~~g~~~iT~DG~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~ 126 (557)
||+++.|+++|||||+||||+|+++||+|+|++++|++|++++||||||+++|+++||+++.+++++|+||+.|++||++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~ 80 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRH 80 (500)
T ss_dssp ------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhccccchhHHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCC
Q 036490 127 ALEDAVAVLDTIAMPIDANDRATVLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGG 206 (557)
Q Consensus 127 a~~~~~~~L~~~s~~i~~~~~~~l~~va~t~l~sk~~~~~~~~ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~ 206 (557)
|++.++++|+++++|++..+++.|.++++|+|+||+.++|+++|++++++|+.+++.+. +|..++|+.++|+|++++|+
T Consensus 81 A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~-~g~~~~di~~~I~V~k~~G~ 159 (500)
T 3aq1_B 81 AAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEE-EDGLKVNVLENIKIEKRAGG 159 (500)
T ss_dssp HHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECC-SSSCEECHHHHEEEEEEESS
T ss_pred HHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccc-cCCccccccccEEEEEecCC
Confidence 99999999999999998667899999999999999999999999999999999998521 24446773447999999999
Q ss_pred CCCCcEEEEeEEEeccccCCCCCcccccCceEEEEecccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 036490 207 QLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFK 286 (557)
Q Consensus 207 ~~~~S~li~Givl~~~~~~~~~~~~~~~n~~Ill~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~ 286 (557)
++++|++++|++|++++.|| .|+++++||||++++++|++++++.++++.+++.++++.+.++|++++++++++|.+.|
T Consensus 160 ~~~ds~lv~G~v~dk~~~~~-~m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g 238 (500)
T 3aq1_B 160 SIDDSELIDGLVIDKERSHP-NMPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASG 238 (500)
T ss_dssp CGGGCEEESEEEESCCCSST-TSCSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTC
T ss_pred CccceEEEeeeEEeecCCCC-CCcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHHHHHHHhCCccccCCCCCCCCCcCCccceEEEEEECceEEEEEEec
Q 036490 287 PDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDC 366 (557)
Q Consensus 287 ~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le~Ia~~tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~ 366 (557)
+||||++++|++.+++||.++||++++++++++|+||+++|||+++++++++++++||+ |+.|++.++|+++|++|++|
T Consensus 239 ~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~ 317 (500)
T 3aq1_B 239 ANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGT-AGLVEEKEVRGGKMTYVTGC 317 (500)
T ss_dssp CSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTCCCSTTCEE-EEEEEEEECSSSEEEEEEEE
T ss_pred cCEEEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEecccccCCHhHCCC-ceEEEEEEecCeEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCchHHHHHHHHHHhhccCCCchhHHHHHHHHHhhh
Q 036490 367 KDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEA 446 (557)
Q Consensus 367 ~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ 446 (557)
.++++|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.
T Consensus 318 ~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ 397 (500)
T 3aq1_B 318 QNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEV 397 (500)
T ss_dssp TTCCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTH
T ss_pred CCCceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred hHHHHHHhcCCCHHHHHHHHHHHhhCCCCceEEEeCCCCcccccccCccccchHHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 036490 447 IPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGI 526 (557)
Q Consensus 447 ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~id~ii~~~ 526 (557)
||++|++|||+|+.+++.+|++.|..++ .++|||..+|++.||.+.|||||+.||+++|+.|+|+|++|||||++|...
T Consensus 398 ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~ 476 (500)
T 3aq1_B 398 IPVALAENAGLDPIDIMVELRSQHEKGN-KNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASK 476 (500)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHTTC-TTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhcCCC-CCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999997664 689999999999999999999999999999999999999999999999887
Q ss_pred ccCCC
Q 036490 527 KKKQA 531 (557)
Q Consensus 527 ~~~~~ 531 (557)
|.++|
T Consensus 477 ~~~~~ 481 (500)
T 3aq1_B 477 GSANQ 481 (500)
T ss_dssp -----
T ss_pred ccCCC
Confidence 65443
No 23
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.5e-94 Score=778.95 Aligned_cols=462 Identities=23% Similarity=0.340 Sum_probs=427.2
Q ss_pred cccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccCh----HHHHHHHHHHhhhhhc
Q 036490 14 RESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHP----AAKSMIELSRTQDEEV 89 (557)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP----~a~ll~~~~~~~~~~~ 89 (557)
..+|.++|.+|+.||..|+++|++||||+||+|||+++.|+++|||||+||||+|+++|| +|+|++++|++|++++
T Consensus 5 ~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~ 84 (543)
T 1we3_A 5 LVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDVA 84 (543)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhheec
Confidence 468899999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhccccchhHHH
Q 036490 90 GDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDRATVLGLVKSCIGTKFTSQFGDL 169 (557)
Q Consensus 90 GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~~~~~l~~va~t~l~sk~~~~~~~~ 169 (557)
||||||++||+++||+++.+++.+|+||+.|++||++|++.++++|+++++|++ +++.|.++++++++ +++
T Consensus 85 GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~~~~l~~vA~iS~~-------~~~ 155 (543)
T 1we3_A 85 GDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVE--DRKAIEEVATISAN-------DPE 155 (543)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCC--SHHHHHHHHHHHHT-------CHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC--CHHHHHHhhhhhcC-------CHH
Confidence 999999999999999999999999999999999999999999999999999987 68899999998752 688
Q ss_pred HHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCc-EEEEeEEEeccccCC------CCCcccccCceEEEEe
Q 036490 170 LADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDS-RVLKGVMFNKDVVAP------GKMRRKIVNPRIILLD 242 (557)
Q Consensus 170 ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S-~li~Givl~~~~~~~------~~~~~~~~n~~Ill~~ 242 (557)
+++++++|+.+++. +| .|+|+ .|+++++| ++++|++|++++.+| ..|+++++||+|+++|
T Consensus 156 i~~li~dAv~~V~~---~g--------~I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d 222 (543)
T 1we3_A 156 VGKLIADAMEKVGK---EG--------IITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVE 222 (543)
T ss_dssp HHHHHHHHHHTTCT---TS--------EEEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEES
T ss_pred HHHHHHHHHHHhCc---CC--------cEEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEEC
Confidence 99999999999974 34 27775 69999988 999999999999886 2478889999999999
Q ss_pred cccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHc------CCeeEe---
Q 036490 243 SPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKA------GVSAIR--- 313 (557)
Q Consensus 243 ~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~------~I~~v~--- 313 (557)
++++ +.+++ .++++++.+.|++|||++++|++.++++|..+ +|++++
T Consensus 223 ~~Is-------------~~~~l-----------~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~ 278 (543)
T 1we3_A 223 KKVS-------------NVREL-----------LPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPG 278 (543)
T ss_dssp SCBC-------------CHHHH-----------HHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSS
T ss_pred CCcC-------------CHHHH-----------HHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccc
Confidence 9754 45554 36788999999999999999999999999986 456665
Q ss_pred --cCChhHHHHHHHHhCCccccC-----CCCCCCCCcCCccceEEEEEECceEEEEEEecCCC-----------------
Q 036490 314 --RLRKTDNNRIAKACGAVIVNR-----PDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP----------------- 369 (557)
Q Consensus 314 --~v~~~~le~Ia~~tGa~iis~-----~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~----------------- 369 (557)
++++++|+||+++|||+++++ ++++++++||+ |+.|++ +++++++|++|.++
T Consensus 279 ~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~-a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~ 354 (543)
T 1we3_A 279 FGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGR-AERVRI---TKDETTIVGGKGKKEDIEARINGIKKELETT 354 (543)
T ss_dssp SHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEE-EEEEEE---CSSCEEEEEECCCHHHHHHHHHHHHHHHTTC
T ss_pred hhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCC-ceEEEE---EcCEEEEEcCCCCHHHHHHHHHHHHHHhhcc
Confidence 888999999999999999996 89999999999 999976 46899999999753
Q ss_pred ------------------CeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCchHHHHHHHHHHhhccCCC
Q 036490 370 ------------------KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 431 (557)
Q Consensus 370 ------------------~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~ 431 (557)
++|||+|||+|+.+++|.||+++|||+++|+++++| +|||||++|++++.+|++++.+.++
T Consensus 355 ~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~~g 433 (543)
T 1we3_A 355 DSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEG-IVPGGGVTLLRAISAVEELIKKLEG 433 (543)
T ss_dssp CSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHHHHHHTTCCH
T ss_pred CchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccC-cCCCccHHHHHHHHHHHHHhhccCc
Confidence 789999999999999999999999999999999999 9999999999999999999887888
Q ss_pred chhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceEEEeCCCCcccccccCccccchHHHHHHHHHHHH
Q 036490 432 IEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIE 511 (557)
Q Consensus 432 ~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e 511 (557)
++|+++++|++||+.||++|++|||+|+.+++.+|+..|. +.++|||..+|++.||++.|||||+.||+++|+.|+|
T Consensus 434 ~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~---~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e 510 (543)
T 1we3_A 434 DEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETK---NPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAAS 510 (543)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCS---CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcC---CCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998773 2679999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhcCCccC
Q 036490 512 AACMLLRIDDIVSGIKKK 529 (557)
Q Consensus 512 ~a~~lL~id~ii~~~~~~ 529 (557)
+|++||++|++|...|++
T Consensus 511 ~a~~iL~id~iI~~~~~~ 528 (543)
T 1we3_A 511 IGALILTTEAVVAEKPEK 528 (543)
T ss_dssp HHHHHHTEEEEEEECSCC
T ss_pred HHHHHHHHHHHhhcCCcc
Confidence 999999999999876653
No 24
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=4.3e-94 Score=774.02 Aligned_cols=461 Identities=21% Similarity=0.324 Sum_probs=425.4
Q ss_pred cccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccCh----HHHHHHHHHHhhhhhc
Q 036490 14 RESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHP----AAKSMIELSRTQDEEV 89 (557)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP----~a~ll~~~~~~~~~~~ 89 (557)
..+|.++|.+|+.||+.|+++|++||||+||+|||+++.|+++|||||+||||+|+++|| +|+|++++|++|++++
T Consensus 5 ~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~ 84 (547)
T 1kp8_A 5 VKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAA 84 (547)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhcccc
Confidence 468899999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhccccchhHHH
Q 036490 90 GDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDRATVLGLVKSCIGTKFTSQFGDL 169 (557)
Q Consensus 90 GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~~~~~l~~va~t~l~sk~~~~~~~~ 169 (557)
||||||++||+++||+++.+++.+|+||+.|++||++|++.++++|+++++|++ +++.|.++++++++ ++++
T Consensus 85 GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~~e~l~~vA~iS~~------~~~~ 156 (547)
T 1kp8_A 85 GDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCS--DSKAIAQVGTISAN------SDET 156 (547)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCC--SHHHHHHHHHHHTT------SCHH
T ss_pred CCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCC--CHHHHHHHHHHhcc------chhH
Confidence 999999999999999999999999999999999999999999999999999987 68899999998753 5799
Q ss_pred HHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCc-EEEEeEEEeccccCCC------CCcccccCceEEEEe
Q 036490 170 LADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDS-RVLKGVMFNKDVVAPG------KMRRKIVNPRIILLD 242 (557)
Q Consensus 170 ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S-~li~Givl~~~~~~~~------~~~~~~~n~~Ill~~ 242 (557)
+++++++|+.+++. +| .|+|+ .|+++++| ++++|++|++++.+|. .|+++++||+|+++|
T Consensus 157 i~~liadAv~~V~~---dg--------~I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d 223 (547)
T 1kp8_A 157 VGKLIAEAMDKVGK---EG--------VITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLAD 223 (547)
T ss_dssp HHHHHHHHHHHHCT---TS--------EEEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEE
T ss_pred HHHHHHHHHHHhCc---CC--------cEEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEc
Confidence 99999999999975 34 27775 79999998 9999999999999862 477889999999999
Q ss_pred cccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCC------eeEe---
Q 036490 243 SPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGV------SAIR--- 313 (557)
Q Consensus 243 ~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I------~~v~--- 313 (557)
++|+ +.+++. ++++++.+.|+||||++++|++.++++|..++| ++++
T Consensus 224 ~~Is-------------~~~~l~-----------~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~ 279 (547)
T 1kp8_A 224 KKIS-------------NIREML-----------PVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPG 279 (547)
T ss_dssp SEEC-------------CGGGTH-----------HHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSS
T ss_pred CcCC-------------CHHHHH-----------HHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccc
Confidence 9754 455543 678889999999999999999999999999754 5555
Q ss_pred --cCChhHHHHHHHHhCCccccC-----CCCCCCCCcCCccceEEEEEECceEEEEEEecCCC-----------------
Q 036490 314 --RLRKTDNNRIAKACGAVIVNR-----PDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP----------------- 369 (557)
Q Consensus 314 --~v~~~~le~Ia~~tGa~iis~-----~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~----------------- 369 (557)
++++++|+||+++||++++++ ++++++++||+ |+.|++ +++++++|++|.++
T Consensus 280 ~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~-a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~ 355 (547)
T 1kp8_A 280 FGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQ-AKRVVI---NKDTTTIIDGVGEEAAIQGRVAQIRQQIEEA 355 (547)
T ss_dssp CHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEE-EEEEEE---CSSCEEEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred cccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCc-eeEEEE---ccceEEEEcCCCCHHHHHHHHHHHHHHhhcc
Confidence 888999999999999999995 99999999999 999976 46899999999764
Q ss_pred ------------------CeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCchHHHHHHHHHHhhccCCC
Q 036490 370 ------------------KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 431 (557)
Q Consensus 370 ------------------~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~ 431 (557)
++|||+|||+|+.+++|.||+++|||+++|+++++| +|||||++|++++.+|++++. .++
T Consensus 356 ~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g 433 (547)
T 1kp8_A 356 TSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG-VVAGGGVALIRVASKLADLRG-QNA 433 (547)
T ss_dssp CSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHTTTCCC-SSH
T ss_pred cchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCC-EEeCCcHHHHHHHHHHHHHhc-cCc
Confidence 789999999999999999999999999999999999 999999999999999998876 778
Q ss_pred chhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceEEEeCCCCcccccccCccccchHHHHHHHHHHHH
Q 036490 432 IEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIE 511 (557)
Q Consensus 432 ~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e 511 (557)
++|+++++|++||+.||++|++|||+|+.+++.+|+.. +.++|||..+|++.||++.|||||+.||+++|+.|+|
T Consensus 434 ~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~-----~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~ 508 (547)
T 1kp8_A 434 DQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG-----DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAAS 508 (547)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS-----CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc-----CCCEeEeCCCCccccchhcCceechHhHHHHHHHHHH
Confidence 99999999999999999999999999999999999864 2679999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhcCCccCC
Q 036490 512 AACMLLRIDDIVSGIKKKQ 530 (557)
Q Consensus 512 ~a~~lL~id~ii~~~~~~~ 530 (557)
+|++||++|++|...|++.
T Consensus 509 ~A~~iL~id~iI~~~~~~~ 527 (547)
T 1kp8_A 509 VAGLMITTECMVTDLPKND 527 (547)
T ss_dssp HHHHHHTEEEEEEECCC--
T ss_pred HHHHHHhHhheeecCCccC
Confidence 9999999999999877654
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=5.8e-95 Score=781.46 Aligned_cols=463 Identities=19% Similarity=0.296 Sum_probs=396.3
Q ss_pred cccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccCh----HHHHHHHHHHhhhhhc
Q 036490 14 RESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHP----AAKSMIELSRTQDEEV 89 (557)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP----~a~ll~~~~~~~~~~~ 89 (557)
..+|.++|.+|+.||+.|+++|++||||+||+|||+++.|+++|||||+||||+|+++|| +|+|++++|++|++++
T Consensus 6 ~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~ 85 (545)
T 1iok_A 6 VKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEA 85 (545)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGGGC
T ss_pred hhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhcccc
Confidence 468899999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhccccchhHHH
Q 036490 90 GDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDRATVLGLVKSCIGTKFTSQFGDL 169 (557)
Q Consensus 90 GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~~~~~l~~va~t~l~sk~~~~~~~~ 169 (557)
||||||++||+++||+++.+++.+|+||+.|++||+.|++.++++|+++++|++ +++.|.+++++++ +++++
T Consensus 86 GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~~e~l~~va~iS~------~~~~~ 157 (545)
T 1iok_A 86 GDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVN--DSSEVAQVGTISA------NGESF 157 (545)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCC--STTTTTHHHHHTT------TTCHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC--CHHHHHHHHHhhc------CCchh
Confidence 999999999999999999999999999999999999999999999999999987 5778999998875 35789
Q ss_pred HHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCc-EEEEeEEEeccccCC------CCCcccccCceEEEEe
Q 036490 170 LADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDS-RVLKGVMFNKDVVAP------GKMRRKIVNPRIILLD 242 (557)
Q Consensus 170 ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S-~li~Givl~~~~~~~------~~~~~~~~n~~Ill~~ 242 (557)
+++++++|+.+++. +|. |+|+ .|+++++| ++++|++|++++.+| ..|+++++||+|+++|
T Consensus 158 i~~li~dAv~~V~~---~g~--------I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d 224 (545)
T 1iok_A 158 IGQQIAEAMQRVGN---EGV--------ITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHE 224 (545)
T ss_dssp HHHHHHHHHHHHCT---TSC--------CCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECS
T ss_pred HHHHHHHHHHHhcc---CCe--------EEEE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEc
Confidence 99999999999975 342 6665 69999998 999999999999886 2478889999999999
Q ss_pred cccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCC------eeEe---
Q 036490 243 SPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAGV------SAIR--- 313 (557)
Q Consensus 243 ~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I------~~v~--- 313 (557)
++|+ +.+++. ++++++.+.|++|||++++|++.++++|..++| ++++
T Consensus 225 ~~I~-------------~~~~l~-----------~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~ 280 (545)
T 1iok_A 225 KKLS-------------SLQPMV-----------PLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPG 280 (545)
T ss_dssp SCBC-------------CCCC----------------------CCCCEEEESCBC-----------------CEEEECSC
T ss_pred CCcC-------------CHHHHH-----------HHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecch
Confidence 9865 333433 677889999999999999999999999999754 5555
Q ss_pred --cCChhHHHHHHHHhCCccccC-----CCCCCCCCcCCccceEEEEEECceEEEEEEecCCC-----------------
Q 036490 314 --RLRKTDNNRIAKACGAVIVNR-----PDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP----------------- 369 (557)
Q Consensus 314 --~v~~~~le~Ia~~tGa~iis~-----~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~----------------- 369 (557)
++++++|+||+++||++++++ ++++++++||+ |+.|++ +++++++|++|.++
T Consensus 281 ~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~-a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~ 356 (545)
T 1iok_A 281 FGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGR-AKKVSI---NKDNTTIVDGAGEKAEIEARVSQIRQQIEET 356 (545)
T ss_dssp CTTHHHHHHHHHHHHHTC---------------CTTSEE-EEEEEE---CSSCEEEESCCCCHHHHHHHHHHHHHHHTTC
T ss_pred hhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCc-CcEEEE---ecCEEEEEeCCCCHHHHHHHHHHHHHHHhcc
Confidence 899999999999999999996 99999999999 999976 46899999999753
Q ss_pred ------------------CeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCchHHHHHHHHHHhhccCCC
Q 036490 370 ------------------KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 431 (557)
Q Consensus 370 ------------------~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~ 431 (557)
++|||+|||+|+.+++|.||+++|||+++|+++++| +|||||++|++|+.+|++++. .++
T Consensus 357 ~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g 434 (545)
T 1iok_A 357 TSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEG-IVVGGGVALVQGAKVLEGLSG-ANS 434 (545)
T ss_dssp CCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHGGGGGSCCC-SSH
T ss_pred CchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCchHHHHHHHHHHHHHhc-cCc
Confidence 789999999999999999999999999999999999 999999999999999998876 778
Q ss_pred chhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceEEEeCCCCcccccccCccccchHHHHHHHHHHHH
Q 036490 432 IEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIE 511 (557)
Q Consensus 432 ~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e 511 (557)
++|+++++|++||+.||++|++|||+|+.+++.+|+..| ++++|||..+|++.||++.|||||+.||+++|+.|+|
T Consensus 435 ~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~----~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~ 510 (545)
T 1iok_A 435 DQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESS----DKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAAS 510 (545)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCC----STTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc----CCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999765 2679999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhcCCccCCC
Q 036490 512 AACMLLRIDDIVSGIKKKQA 531 (557)
Q Consensus 512 ~a~~lL~id~ii~~~~~~~~ 531 (557)
+|++||++|++|...|.+.+
T Consensus 511 ~A~~iL~id~iI~~~~~~~~ 530 (545)
T 1iok_A 511 VAGLLITTEAMIAEKPEPKA 530 (545)
T ss_dssp HHHHHHTEEEEEEECC----
T ss_pred HHHHHHhHHHhhccCCccCC
Confidence 99999999999998775443
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=4.7e-94 Score=771.48 Aligned_cols=461 Identities=22% Similarity=0.293 Sum_probs=351.2
Q ss_pred cccchHHHHHHHHHHHHHHHHhhhcCCcccccceeecCCCCEEEeccHHHHhhhccccChH----HHHHHHHHHhhhhhc
Q 036490 14 RESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPA----AKSMIELSRTQDEEV 89 (557)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iT~DG~tIl~~l~~~hP~----a~ll~~~~~~~~~~~ 89 (557)
..+|.++|.+|+.||+.|+++|++||||+||+|||+++.|+++|||||+||||+|+++||+ |+|++++|++|++++
T Consensus 5 ~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~e~ 84 (546)
T 3rtk_A 5 IAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVA 84 (546)
T ss_dssp --------------------------------------------------------CCCHHHHHHHHHHHHHHTSCC---
T ss_pred eeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhhhh
Confidence 4689999999999999999999999999999999999999999999999999999999997 999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhhccccCCCCcHHHHHHHHHHhhhccccchhHHH
Q 036490 90 GDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDRATVLGLVKSCIGTKFTSQFGDL 169 (557)
Q Consensus 90 GDGttt~viL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~i~~~~~~~l~~va~t~l~sk~~~~~~~~ 169 (557)
||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+++++ +++
T Consensus 85 GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~--~~e~L~~vA~iS~~-------~~~ 155 (546)
T 3rtk_A 85 GDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVE--TKEQIAATAAISAG-------DQS 155 (546)
T ss_dssp ----CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCC--SHHHHHHHHHHHHT-------CHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC--ChHHHHhHeEEeCC-------chH
Confidence 999999999999999999999999999999999999999999999999999987 68899999998753 578
Q ss_pred HHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCC------CCCcccccCceEEEEec
Q 036490 170 LADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAP------GKMRRKIVNPRIILLDS 243 (557)
Q Consensus 170 ls~lv~~a~~~v~~~~~~g~~~~d~~~~I~I~~i~G~~~~~S~li~Givl~~~~~~~------~~~~~~~~n~~Ill~~~ 243 (557)
+++++++|+.+++. +| .|+|.+.. +...+|++++|++|++++.+| +.|+++++||+|+++|+
T Consensus 156 i~~liadAv~~V~~---dg--------vI~Ve~~~-~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~ 223 (546)
T 3rtk_A 156 IGDLIAEAMDKVGN---EG--------VITVEESN-TFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSS 223 (546)
T ss_dssp HHHHHHHHHHHSCT---TS--------EEEEECCS-SSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSS
T ss_pred HHHHHHHHHHHhcc---CC--------ceEEEecC-CcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECC
Confidence 99999999999975 34 37787644 344689999999999999886 36889999999999999
Q ss_pred ccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcC------CeeE-----
Q 036490 244 PLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITEKGLSDLACHYLSKAG------VSAI----- 312 (557)
Q Consensus 244 ~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~------I~~v----- 312 (557)
+++ +.+++. ++++++.+.|+||+|++++|++.++++|..++ +.++
T Consensus 224 kIs-------------~~~~l~-----------~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~ 279 (546)
T 3rtk_A 224 KVS-------------TVKDLL-----------PLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGF 279 (546)
T ss_dssp EEC-------------CSTTTH-----------HHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSC
T ss_pred ccC-------------CHHHHH-----------HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccc
Confidence 743 445543 67899999999999999999999999998764 3454
Q ss_pred ecCChhHHHHHHHHhCCcccc-----CCCCCCCCCcCCccceEEEEEECceEEEEEEecCCC------------------
Q 036490 313 RRLRKTDNNRIAKACGAVIVN-----RPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP------------------ 369 (557)
Q Consensus 313 ~~v~~~~le~Ia~~tGa~iis-----~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~------------------ 369 (557)
++.++.+|+||+++||+++++ +++++++++||+ |+.|+ ++++++++|++|.++
T Consensus 280 ~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~-a~~v~---i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~ 355 (546)
T 3rtk_A 280 GDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGK-ARKVV---VTKDETTIVEGAGDTDAIAGRVAQIRQEIENSD 355 (546)
T ss_dssp HHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEE-EEEEE---ECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCS
T ss_pred cccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCe-eEEEE---EcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhcc
Confidence 355688999999999999999 689999999999 99997 578999999999763
Q ss_pred -----------------CeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCchHHHHHHHHHHhhccCCCc
Q 036490 370 -----------------KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGI 432 (557)
Q Consensus 370 -----------------~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~ 432 (557)
.+|||+|||+|+.+++|.||+++|||+++|+++++| +|||||++|++++.+|++++ .+++
T Consensus 356 s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~g-iVpGGGa~e~~~s~~L~~~~--~~g~ 432 (546)
T 3rtk_A 356 SDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEG-IVAGGGVTLLQAAPTLDELK--LEGD 432 (546)
T ss_dssp CHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHTTGGGSTTSC--CCTT
T ss_pred chhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCC-cccCCcHHHHHHHHHHHHhc--cccH
Confidence 489999999999999999999999999999999999 99999999999999999876 7899
Q ss_pred hhHHHHHHHHHhhhhHHHHHHhcCCCHHHHHHHHHHHhhCCCCceEEEeCCCCcccccccCccccchHHHHHHHHHHHHH
Q 036490 433 EKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEA 512 (557)
Q Consensus 433 ~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~~~~~~~~~~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~ 512 (557)
+|+++++|++||+.||++|++|||+|+.+++.+|+..+ ..+|||..+|++.||++.|||||+.||+++|+.|+|+
T Consensus 433 eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~-----~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~ 507 (546)
T 3rtk_A 433 EATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLP-----AGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASI 507 (546)
T ss_dssp HHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHSC-----TTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc-----CCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998742 3489999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhcCCccCCC
Q 036490 513 ACMLLRIDDIVSGIKKKQA 531 (557)
Q Consensus 513 a~~lL~id~ii~~~~~~~~ 531 (557)
|++||++|++|...|.+.|
T Consensus 508 A~~iL~id~iI~~~~~~~~ 526 (546)
T 3rtk_A 508 AGLFLTTEAVVADKPEKEK 526 (546)
T ss_dssp HHHHHHCC-----------
T ss_pred HHHHHHHHHHHhcCCCCCC
Confidence 9999999999998776543
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=2.5e-36 Score=279.61 Aligned_cols=174 Identities=70% Similarity=1.147 Sum_probs=151.3
Q ss_pred CCCcEEEEeEEEeccccCCCCCcccccCceEEEEecccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 036490 208 LEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKP 287 (557)
Q Consensus 208 ~~~S~li~Givl~~~~~~~~~~~~~~~n~~Ill~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~ 287 (557)
++||++++|++|++++.++ +||++++||||++++++|++++++.+.++.+++++++++++++|++++++++++|.+.|+
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~-~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 79 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHP-RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKP 79 (178)
T ss_dssp --CCSEEEEEEESCCCSST-TSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcEEEEEEEEeccccCC-CCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 3689999999999999998 899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHHHHHHHhCCccccCCCCCCCCCcCCccceEEEEEECceEEEEEEecC
Q 036490 288 DLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCK 367 (557)
Q Consensus 288 ~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le~Ia~~tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~ 367 (557)
|||+++++|++.+++||.++||++++++++++|+|||++|||++++++++++++.+|+.|+.|+++++|+++|++|++|+
T Consensus 80 nVVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~gc~ 159 (178)
T 1gml_A 80 DVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCK 159 (178)
T ss_dssp SEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEEES
T ss_pred cEEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccEEEEEEECCeEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999965899999999999999999999
Q ss_pred CCCeEEEEEccCCHH
Q 036490 368 DPKACTVLLRGASKD 382 (557)
Q Consensus 368 ~~~~~TIll~G~t~~ 382 (557)
+++.|||+|||++..
T Consensus 160 ~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 160 DPKACTILLRGASHH 174 (178)
T ss_dssp STTSCEEEEEC----
T ss_pred CCCEEEEEEECCCcc
Confidence 999999999999864
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.97 E-value=5.8e-32 Score=245.29 Aligned_cols=154 Identities=35% Similarity=0.585 Sum_probs=149.1
Q ss_pred EEeEEEeccccCCCCCcccccCceEEEEecccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEeC
Q 036490 214 LKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDLVITE 293 (557)
Q Consensus 214 i~Givl~~~~~~~~~~~~~~~n~~Ill~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~lIi~~ 293 (557)
++|++|++++.++ +||++++||||++++++|++++++.++++.++++++++.+.++|++++++++++|.+.|+|||+++
T Consensus 1 i~Gvv~~k~~~~~-~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~ 79 (159)
T 1ass_A 1 MSGIVIDKEKVHS-KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQ 79 (159)
T ss_dssp CCCEEESCCCSCT-TSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEES
T ss_pred CceEEEecccCCC-CCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEEC
Confidence 4799999999998 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCeeEecCChhHHHHHHHHhCCccccCCCCCCCCCcCCccceEEEEEECceEEEEEEecCCC
Q 036490 294 KGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP 369 (557)
Q Consensus 294 ~~i~~~al~~L~~~~I~~v~~v~~~~le~Ia~~tGa~iis~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~ 369 (557)
++|++.+++||.++||++++++++++|+|||++|||++++++++++++.+|+ |+.|+++++|+++|++|++|++.
T Consensus 80 k~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~LG~-~~~v~e~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 80 KGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGE-AETVEERKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp SCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEE-EEEEEEEEETTEEEEEEESCC--
T ss_pred CccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCcccCcc-ceEEEEEEECCeEEEEEECCCCc
Confidence 9999999999999999999999999999999999999999999999999999 99999999999999999999754
No 29
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=99.26 E-value=3.3e-11 Score=109.01 Aligned_cols=145 Identities=19% Similarity=0.230 Sum_probs=110.0
Q ss_pred cEEEEeEEEeccccCC------CCCcccccCceEEEEecccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHH
Q 036490 211 SRVLKGVMFNKDVVAP------GKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVK 284 (557)
Q Consensus 211 S~li~Givl~~~~~~~------~~~~~~~~n~~Ill~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~ 284 (557)
.++++|+.|+++|.+| +.|...++||+||+++.+++ +.+++. ++++.+.+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs-------------~i~~il-----------P~LE~~~~ 57 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKIS-------------SLPDLL-----------PLLEKVAG 57 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEEC-------------CHHHHH-----------HHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccC-------------CHHHHH-----------HHHHHHHH
Confidence 4578999999999886 36778899999999998854 556655 67788888
Q ss_pred cCCcEEEeCCCCCHHHHHHHHHc------CCeeEe-----cCChhHHHHHHHHhCCcccc-----CCCCCCCCCcCCccc
Q 036490 285 FKPDLVITEKGLSDLACHYLSKA------GVSAIR-----RLRKTDNNRIAKACGAVIVN-----RPDELQESDVGTGAG 348 (557)
Q Consensus 285 ~~~~lIi~~~~i~~~al~~L~~~------~I~~v~-----~v~~~~le~Ia~~tGa~iis-----~~~~l~~~~lG~~~~ 348 (557)
.+.+++|++.+|+.+++..|.-| ++.+++ .-++..|++||.+||+++++ ++++.+.++||+ |+
T Consensus 58 ~~kpLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~-a~ 136 (194)
T 3m6c_A 58 TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGS-AR 136 (194)
T ss_dssp HTCCEEEEESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEE-EE
T ss_pred hCCCeEEEecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCC-cc
Confidence 89999999999999999998766 344554 44578899999999999997 456777788998 87
Q ss_pred eEEEEEECceEEEEEEecCCCCeEEEEEc-cCCHHHHHHHHHHHHHHHH
Q 036490 349 LFEVKKIGDEFFAFIVDCKDPKACTVLLR-GASKDLLNEVERNLQDAMS 396 (557)
Q Consensus 349 ~v~~~~ig~~~~~~l~~~~~~~~~TIll~-G~t~~~l~e~~~~l~dal~ 396 (557)
++.+.+ --|.+++ +.++..++.+...++.-+.
T Consensus 137 ~v~vtk----------------d~T~iv~G~g~~~~I~~Rv~qIr~~ie 169 (194)
T 3m6c_A 137 RVVVSK----------------DDTVIVDGGGTAEAVANRAKHLRAEID 169 (194)
T ss_dssp EEEECS----------------SCEEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred EEEEcC----------------CceEEecCCCCHHHHHHHHHHHHHHHH
Confidence 776432 2244554 4566666666666655544
No 30
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=99.20 E-value=1.7e-10 Score=104.59 Aligned_cols=141 Identities=17% Similarity=0.265 Sum_probs=106.5
Q ss_pred EeEEEeccccCC------CCCcccccCceEEEEecccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Q 036490 215 KGVMFNKDVVAP------GKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPD 288 (557)
Q Consensus 215 ~Givl~~~~~~~------~~~~~~~~n~~Ill~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~ 288 (557)
+|+.|+++|.+| +.|...++||+||+++.+++ +.+++. ++++.+.+.+.+
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs-------------~i~~il-----------P~LE~v~~~~rp 68 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKIS-------------NIRELL-----------PVLEGVAKASKP 68 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEEC-------------CHHHHH-----------HHHHHHHTSSCC
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEEEcCccC-------------CHHHHH-----------HHHHHHHHhCCC
Confidence 589999998875 36778899999999998854 556655 777899999999
Q ss_pred EEEeCCCCCHHHHHHHHHc------CCeeEe-----cCChhHHHHHHHHhCCcccc-----CCCCCCCCCcCCccceEEE
Q 036490 289 LVITEKGLSDLACHYLSKA------GVSAIR-----RLRKTDNNRIAKACGAVIVN-----RPDELQESDVGTGAGLFEV 352 (557)
Q Consensus 289 lIi~~~~i~~~al~~L~~~------~I~~v~-----~v~~~~le~Ia~~tGa~iis-----~~~~l~~~~lG~~~~~v~~ 352 (557)
|+|++.+|+.+++..|.-| ++.+|+ .-++..|++||.+||+++++ ++++.+.++||. |+++.+
T Consensus 69 LlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~-a~~V~v 147 (201)
T 3osx_A 69 LVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQ-AKRVVI 147 (201)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEE-EEEEEE
T ss_pred eEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCC-ccEEEE
Confidence 9999999999999988766 344554 34467899999999999997 456777788998 877764
Q ss_pred EEECceEEEEEEecCCCCeEEEEEc-cCCHHHHHHHHHHHHHHHH
Q 036490 353 KKIGDEFFAFIVDCKDPKACTVLLR-GASKDLLNEVERNLQDAMS 396 (557)
Q Consensus 353 ~~ig~~~~~~l~~~~~~~~~TIll~-G~t~~~l~e~~~~l~dal~ 396 (557)
.+ --|+++. +.++..++.+...++.-+.
T Consensus 148 tk----------------d~TtIv~G~G~~~~I~~Rv~qIr~qie 176 (201)
T 3osx_A 148 NK----------------DTTTIIDGVGEEGAIAARVTQIRQQIE 176 (201)
T ss_dssp CS----------------SCEEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred cC----------------CceEEecCCCCHHHHHHHHHHHHHHHH
Confidence 32 2245554 4566666666666655544
No 31
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.18 E-value=6.6e-11 Score=102.09 Aligned_cols=113 Identities=19% Similarity=0.277 Sum_probs=90.9
Q ss_pred eEEEeccccCC------CCCcccccCceEEEEecccccccccccceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHcCCcE
Q 036490 216 GVMFNKDVVAP------GKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWGVMLKIEEDYIENLCMQIVKFKPDL 289 (557)
Q Consensus 216 Givl~~~~~~~------~~~~~~~~n~~Ill~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~i~~~~~~l 289 (557)
|+.|+++|.+| +.|...++||+||+++.+++ +.+++. ++++++.+.+.++
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs-------------~i~~ll-----------P~LE~v~~~~~pL 56 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVS-------------NVRELL-----------PILEQVAQTGKPL 56 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEEC-------------CHHHHH-----------HHHHHHHTTTCCE
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEeccccc-------------CHHHHH-----------HHHHHHHHHCCCE
Confidence 78899988875 47778899999999998854 566655 7778999999999
Q ss_pred EEeCCCCCHHHHHHHHHc------CCeeEe-----cCChhHHHHHHHHhCCccccC-----CCCCCCCCcCCccceEEEE
Q 036490 290 VITEKGLSDLACHYLSKA------GVSAIR-----RLRKTDNNRIAKACGAVIVNR-----PDELQESDVGTGAGLFEVK 353 (557)
Q Consensus 290 Ii~~~~i~~~al~~L~~~------~I~~v~-----~v~~~~le~Ia~~tGa~iis~-----~~~l~~~~lG~~~~~v~~~ 353 (557)
+|++.+|+.+++..|.-| ++.+++ ..++..|++||.+||+++++. +++.+.++||+ |+++.+.
T Consensus 57 lIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~-a~~v~vt 135 (145)
T 1srv_A 57 LIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGR-AERVRIT 135 (145)
T ss_dssp EEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEE-EEEEEEC
T ss_pred EEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCc-cCEEEEc
Confidence 999999999999999776 334554 445788999999999999973 45666778998 8877654
No 32
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=55.77 E-value=29 Score=29.33 Aligned_cols=52 Identities=17% Similarity=0.171 Sum_probs=38.7
Q ss_pred HHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHHHHHHHhCCc
Q 036490 278 LCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (557)
Q Consensus 278 ~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le~Ia~~tGa~ 330 (557)
..+.|.+.++++||+. ++.+.+...|.++||.++.......-+.|.....++
T Consensus 68 ~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 68 VPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp HHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 3455667899999996 689999999999999999866544444455554443
No 33
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=53.07 E-value=36 Score=27.83 Aligned_cols=53 Identities=21% Similarity=0.273 Sum_probs=39.1
Q ss_pred HHHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHHHHHHHhCCc
Q 036490 277 NLCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (557)
Q Consensus 277 ~~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le~Ia~~tGa~ 330 (557)
...+.|...++++||+. ++.+-+...|.+.||.++.......-+.|.....+.
T Consensus 54 ~~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~ 106 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGK 106 (121)
T ss_dssp HHHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCC
Confidence 34456667899999996 699999999999999999765544344455555443
No 34
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=50.04 E-value=42 Score=27.55 Aligned_cols=51 Identities=14% Similarity=0.071 Sum_probs=37.9
Q ss_pred HHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHHHHHHHhCCc
Q 036490 279 CMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (557)
Q Consensus 279 v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le~Ia~~tGa~ 330 (557)
.+.|.+.|+++|||. ++.+-+...|.+.||.++.......-+.|.....+.
T Consensus 58 ~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 58 AQIIANNGVKAVIAS-SPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHHTTCCEEEEC-CSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHCCCCEEEEC-CcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 355667899999996 599999999999999999865544334455554443
No 35
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=47.95 E-value=41 Score=27.46 Aligned_cols=51 Identities=16% Similarity=0.146 Sum_probs=37.9
Q ss_pred HHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCCh-hHHHHHHHHhCC
Q 036490 278 LCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRK-TDNNRIAKACGA 329 (557)
Q Consensus 278 ~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~-~~le~Ia~~tGa 329 (557)
..+.|...++++|+|. ++.+.+...|.+.||.++..... ..-+.|.....+
T Consensus 59 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~g 110 (120)
T 2wfb_A 59 AAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLDG 110 (120)
T ss_dssp HHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHTT
T ss_pred HHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHcC
Confidence 4455667899999996 69999999999999999986554 333445554444
No 36
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=41.41 E-value=60 Score=27.29 Aligned_cols=51 Identities=0% Similarity=0.022 Sum_probs=37.0
Q ss_pred HHHHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHHHHHHHhCCc
Q 036490 278 LCMQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (557)
Q Consensus 278 ~v~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le~Ia~~tGa~ 330 (557)
..+.|.+.++++||+. ++.+-+...|.+ ||.++.......-+.|.....+.
T Consensus 71 ~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G~ 121 (136)
T 2re2_A 71 MLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEGK 121 (136)
T ss_dssp HHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhCC
Confidence 4455667899999996 689999999999 99999875533334454444443
No 37
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=34.78 E-value=43 Score=27.09 Aligned_cols=50 Identities=20% Similarity=0.133 Sum_probs=37.2
Q ss_pred HHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHHHHHHHhCCc
Q 036490 280 MQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (557)
Q Consensus 280 ~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le~Ia~~tGa~ 330 (557)
+.|...++++|++. ++.+-+...|.++||.++.......-+.|.....+.
T Consensus 56 ~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 56 QSLVSKGVEYLIAS-NVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHTTTCCEEECS-SCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 45667899999996 589999999999999999865544444455555443
No 38
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=29.06 E-value=1.4e+02 Score=23.46 Aligned_cols=48 Identities=17% Similarity=0.151 Sum_probs=35.4
Q ss_pred HHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCChhHHHHHHHHhCC
Q 036490 280 MQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGA 329 (557)
Q Consensus 280 ~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~~~~le~Ia~~tGa 329 (557)
+.+...++++|+|. ++.+-+...|.+. |.++......--+.|.....+
T Consensus 50 ~~l~~~gv~~vi~~-~iG~~a~~~L~~~-I~v~~~~~~~v~eal~~~~~g 97 (105)
T 2qtd_A 50 KSIVKENVNAIICK-NISEENYKKFSKK-IEIYHAEGDDVDKNISLFIEG 97 (105)
T ss_dssp HHHHHTCCSEEEES-CCCHHHHHHHHTT-CEEEECCSSCHHHHHHHHHTT
T ss_pred HHHHHCCCCEEEEC-CCCHHHHHHHHhc-cEEEECCCCCHHHHHHHHHcC
Confidence 44556899999995 6999999999999 999886554434445554444
No 39
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=23.66 E-value=1.2e+02 Score=29.03 Aligned_cols=34 Identities=15% Similarity=0.285 Sum_probs=27.5
Q ss_pred HHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEe
Q 036490 280 MQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIR 313 (557)
Q Consensus 280 ~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~ 313 (557)
+.|...+++|||.....++...+.|.+.||.++.
T Consensus 78 E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~ 111 (326)
T 3psh_A 78 ESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVA 111 (326)
T ss_dssp HHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEE
T ss_pred HHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEE
Confidence 5777889999998766677788889998987653
No 40
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=21.10 E-value=1.4e+02 Score=24.53 Aligned_cols=39 Identities=23% Similarity=0.286 Sum_probs=28.8
Q ss_pred HHHHHHHHcCCcEEEeCCCC-CHHHHHHHHHcCCeeEecC
Q 036490 277 NLCMQIVKFKPDLVITEKGL-SDLACHYLSKAGVSAIRRL 315 (557)
Q Consensus 277 ~~v~~i~~~~~~lIi~~~~i-~~~al~~L~~~~I~~v~~v 315 (557)
+.++.+.+.|+..|+.+.++ ++.+.+.+.++||.+++++
T Consensus 73 ~~v~e~~~~g~k~v~~~~G~~~~e~~~~a~~~Girvv~nC 112 (122)
T 3ff4_A 73 SEYNYILSLKPKRVIFNPGTENEELEEILSENGIEPVIGC 112 (122)
T ss_dssp GGHHHHHHHCCSEEEECTTCCCHHHHHHHHHTTCEEEESC
T ss_pred HHHHHHHhcCCCEEEECCCCChHHHHHHHHHcCCeEECCc
Confidence 55677777787766666554 7788888889999888754
No 41
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=21.02 E-value=2.2e+02 Score=22.28 Aligned_cols=51 Identities=12% Similarity=0.081 Sum_probs=36.7
Q ss_pred HHHHHHHHcCCcEEEeCCCCCHHHHH----HHHHcCCeeEecCChhHHHHHHHHhCCc
Q 036490 277 NLCMQIVKFKPDLVITEKGLSDLACH----YLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (557)
Q Consensus 277 ~~v~~i~~~~~~lIi~~~~i~~~al~----~L~~~~I~~v~~v~~~~le~Ia~~tGa~ 330 (557)
+..+.|.+-.+.+||.+.+.++.... ++...+|.++...++.+ |..++|-.
T Consensus 26 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~s~~e---LG~A~Gk~ 80 (101)
T 3v7q_A 26 LVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVESRAV---LGRSIGKE 80 (101)
T ss_dssp HHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEESCHHH---HHHHTTSS
T ss_pred hhHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeeechHHH---HHhhhCcc
Confidence 44555666678999999999986554 45677998887766655 56777754
No 42
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=20.95 E-value=1.1e+02 Score=28.28 Aligned_cols=50 Identities=10% Similarity=0.131 Sum_probs=35.6
Q ss_pred HHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEe--cCC----hhHHHHHHHHhCC
Q 036490 280 MQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIR--RLR----KTDNNRIAKACGA 329 (557)
Q Consensus 280 ~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~--~v~----~~~le~Ia~~tGa 329 (557)
+.|...+++|||.....++...+.|.+.+|.++. .-. .+.++.++.++|.
T Consensus 54 E~i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~~g~ 109 (260)
T 2q8p_A 54 EAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNR 109 (260)
T ss_dssp HHHHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCSSHHHHHHHHHHHHHHTTC
T ss_pred HHHHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 5677889999998766666777888888876442 212 2456778888885
No 43
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=20.72 E-value=2.3e+02 Score=23.38 Aligned_cols=50 Identities=10% Similarity=0.105 Sum_probs=35.6
Q ss_pred HHHHHHHHcCCcEEEeCCCCCH-----HHHHHHHHcCCeeEecCChhHHHHHHHHhCC
Q 036490 277 NLCMQIVKFKPDLVITEKGLSD-----LACHYLSKAGVSAIRRLRKTDNNRIAKACGA 329 (557)
Q Consensus 277 ~~v~~i~~~~~~lIi~~~~i~~-----~al~~L~~~~I~~v~~v~~~~le~Ia~~tGa 329 (557)
+.++.|.+-.+.+|+.+.+.+| .+..+|..++|.++.--++. +|..++|-
T Consensus 31 ~v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~sk~---~LG~a~G~ 85 (126)
T 2xzm_U 31 EVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVPKRA---SLGEYLGH 85 (126)
T ss_dssp HHHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEESCSH---HHHHHHTC
T ss_pred HHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHH---HHHHHHCC
Confidence 4455566677899999999975 45567888999987544444 46677774
No 44
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=20.72 E-value=2.1e+02 Score=26.74 Aligned_cols=50 Identities=16% Similarity=0.285 Sum_probs=36.7
Q ss_pred HHHHHcCCcEEEeCCCC-CHHHHHHHHHcCCeeEec---CC----hhHHHHHHHHhCC
Q 036490 280 MQIVKFKPDLVITEKGL-SDLACHYLSKAGVSAIRR---LR----KTDNNRIAKACGA 329 (557)
Q Consensus 280 ~~i~~~~~~lIi~~~~i-~~~al~~L~~~~I~~v~~---v~----~~~le~Ia~~tGa 329 (557)
+.|...+++|||..... ++...+.|.+.||.++.- -. .+.++.|+.++|.
T Consensus 53 E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~ 110 (283)
T 2r79_A 53 EGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKKLGDWLGV 110 (283)
T ss_dssp HHHHTTCCSEEEECTTCCCHHHHHHHHHTTCCEEECCCCSSHHHHHHHHHHHHHHHTC
T ss_pred HHHHhcCCCEEEEeCccCcHHHHHHHHHcCCcEEEecCCCCHHHHHHHHHHHHHHhCC
Confidence 56888999999987643 567788899999866532 12 2457788888885
No 45
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=20.33 E-value=2.5e+02 Score=22.85 Aligned_cols=50 Identities=16% Similarity=0.068 Sum_probs=35.9
Q ss_pred HHHHHHHHcCCcEEEeCCCCCHH-----HHHHHHHcCCeeEecCChhHHHHHHHHhCC
Q 036490 277 NLCMQIVKFKPDLVITEKGLSDL-----ACHYLSKAGVSAIRRLRKTDNNRIAKACGA 329 (557)
Q Consensus 277 ~~v~~i~~~~~~lIi~~~~i~~~-----al~~L~~~~I~~v~~v~~~~le~Ia~~tGa 329 (557)
+.++.|.+-.+.+|+.+.++++. +..+|.++||..+..-++.+ |..++|.
T Consensus 27 ~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk~e---LG~a~g~ 81 (121)
T 2lbw_A 27 EVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSKQD---LGAAGAT 81 (121)
T ss_dssp HHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCHHH---HHHHHTC
T ss_pred HHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCHHH---HHHHhCC
Confidence 45566666778999999999884 34567888998876656655 5566773
No 46
>2wi8_A Iron-uptake system-binding protein; bacillibactin and enterobactin binding, triscatecholate BIND protein, iron transport; 1.55A {Bacillus subtilis} PDB: 2why_A 2xuz_A* 2xv1_A* 2phz_A
Probab=20.32 E-value=1.8e+02 Score=27.73 Aligned_cols=50 Identities=20% Similarity=0.321 Sum_probs=36.9
Q ss_pred HHHHHcCCcEEEeCCCCCHHHHHHHHHcCCeeEecCC----hhHHHHHHHHhCC
Q 036490 280 MQIVKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLR----KTDNNRIAKACGA 329 (557)
Q Consensus 280 ~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~v~~v~----~~~le~Ia~~tGa 329 (557)
+.|...+|+|||.....++...+.|.+.+..++-... .+.++.|+.++|.
T Consensus 90 E~I~~l~PDLIi~~~~~~~~~~~~L~~~gp~v~~~~~~~~~~~~i~~lg~~lg~ 143 (311)
T 2wi8_A 90 EKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGK 143 (311)
T ss_dssp HHHHHHCCSEEEEETTSCHHHHHHHHTTSCEEEECCCGGGHHHHHHHHHHHHTC
T ss_pred HHHHhCCCCEEEEcCccCHHHHHHHHhhCCEEEeeCCCcCHHHHHHHHHHHhCC
Confidence 5677889999998766778888889888865543322 2457788888885
Done!