Query 036497
Match_columns 375
No_of_seqs 172 out of 1160
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 02:40:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036497.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036497hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG4826 Serine protease inhibi 100.0 2.5E-79 5.4E-84 539.9 19.3 351 5-362 36-407 (410)
2 KOG2392 Serpin [Defense mechan 100.0 8.8E-74 1.9E-78 548.3 33.2 351 4-361 4-380 (380)
3 cd02044 ov-serpin ovalbumin fa 100.0 1.1E-73 2.4E-78 550.5 33.5 344 9-361 3-370 (370)
4 cd02054 angiotensinogen Angiot 100.0 3.6E-73 7.7E-78 545.3 36.1 338 7-361 2-372 (372)
5 cd02043 plant_SERPIN SERine Pr 100.0 2.4E-73 5.3E-78 549.7 33.2 350 11-361 3-381 (381)
6 cd02048 neuroserpin Neuroserpi 100.0 8.4E-74 1.8E-78 554.0 28.2 348 9-365 2-379 (388)
7 cd02059 ovalbumin_like The ova 100.0 1.2E-72 2.7E-77 546.2 34.5 346 9-361 3-389 (389)
8 cd02045 antithrombin-III_like 100.0 5.5E-73 1.2E-77 546.3 31.5 348 6-358 4-381 (381)
9 cd02057 maspin_like Maspin (ma 100.0 5.3E-73 1.1E-77 545.4 30.7 342 9-361 3-372 (372)
10 cd02058 PAI-2 Plasminogen Acti 100.0 2.4E-72 5.2E-77 543.1 31.2 347 8-361 2-380 (380)
11 cd02051 PAI-1_nexin-1 Plasmino 100.0 3.5E-72 7.5E-77 540.7 31.0 344 7-361 7-377 (377)
12 cd02047 HCII Heparin cofactor 100.0 1.3E-71 2.8E-76 542.4 34.4 346 3-362 61-436 (436)
13 cd02049 bacterial_SERPIN SERin 100.0 7.3E-72 1.6E-76 536.8 32.0 342 8-358 2-364 (364)
14 cd02056 alpha-1-antitrypsin_li 100.0 9.7E-72 2.1E-76 535.6 32.6 337 10-358 1-361 (361)
15 smart00093 SERPIN SERine Prot 100.0 1.7E-71 3.6E-76 533.7 32.9 334 16-361 1-359 (359)
16 cd00172 SERPIN SERine Proteina 100.0 1.9E-71 4E-76 534.7 32.7 340 10-358 1-364 (364)
17 cd02046 hsp47 Heat shock prote 100.0 2.1E-71 4.6E-76 532.2 32.1 340 7-358 3-366 (366)
18 cd02052 PEDF Pigment epitheliu 100.0 1.5E-71 3.2E-76 534.8 30.3 341 2-361 10-374 (374)
19 PF00079 Serpin: Serpin (serin 100.0 2.1E-70 4.6E-75 529.0 33.9 346 9-361 1-371 (371)
20 cd02055 PZI Protein Z-dependen 100.0 3.1E-70 6.6E-75 524.0 24.6 336 7-358 2-365 (365)
21 PHA02948 serine protease inhib 100.0 1.9E-69 4.1E-74 518.0 27.3 333 10-361 20-373 (373)
22 cd02053 alpha2AP Alpha2-antipl 100.0 4.7E-69 1E-73 514.1 29.2 328 9-358 3-351 (351)
23 cd02050 C1_inh C1 inhibitor (C 100.0 1.2E-67 2.5E-72 504.8 26.6 324 10-358 1-352 (352)
24 PHA02660 serpin-like protein; 100.0 7.3E-68 1.6E-72 506.0 22.3 320 8-361 12-364 (364)
25 PF07037 DUF1323: Putative tra 41.4 16 0.00034 28.9 1.4 12 128-139 12-23 (122)
26 PF14679 FANCI_HD1: FANCI heli 36.4 36 0.00079 25.4 2.6 29 13-41 1-33 (87)
27 PF04079 DUF387: Putative tran 34.4 1.2E+02 0.0027 25.4 5.8 71 37-115 3-74 (159)
28 KOG3498 Preprotein translocase 31.3 76 0.0016 22.1 3.3 45 1-45 1-49 (67)
29 TIGR00281 segregation and cond 31.2 2.8E+02 0.006 24.0 7.6 77 37-119 6-84 (186)
30 COG1386 scpB Chromosome segreg 24.9 2.2E+02 0.0048 24.5 5.9 70 39-116 15-85 (184)
31 PF01666 DX: DX module; Inter 24.8 84 0.0018 22.8 2.8 28 336-363 14-41 (76)
32 PRK00135 scpB segregation and 24.0 2.8E+02 0.0061 23.9 6.4 72 37-115 9-82 (188)
33 KOG0572 Glutamine phosphoribos 22.3 68 0.0015 30.9 2.4 36 332-369 171-206 (474)
34 PF13766 ECH_C: 2-enoyl-CoA Hy 22.0 2.7E+02 0.0059 21.9 5.5 33 10-46 28-60 (118)
No 1
>COG4826 Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.5e-79 Score=539.85 Aligned_cols=351 Identities=26% Similarity=0.411 Sum_probs=316.7
Q ss_pred HHhhhhhhhHHHHHHHHhcCCC----C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCCh-hhHH-HHHHHHHHHHh
Q 036497 5 LESISEQTDITLSLSKHIKAPT----S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSN-EQQN-FASELVAIVFA 77 (375)
Q Consensus 5 ~~~~~~~~~f~~~l~~~~~~~~----~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~-~~~~-~~~~l~~~l~~ 77 (375)
+..++++|.|+++||.++.+.+ + .|||+||+.+|||-|.||.|.|++||..+++++.+ ..++ ..+.+...+.
T Consensus 36 y~ia~ANNaF~FdlyS~~~~~~~~~~Ni~fSPySV~~AmAmcY~GaeGsTkeqmsnvfyfp~n~~vl~~~~~~~nd~i~- 114 (410)
T COG4826 36 YDIAAANNAFAFDLYSELAKQEGEAENILFSPYSVSAAMAMCYEGAEGSTKEQMSNVFYFPINKTVLKVREKSLNDKIN- 114 (410)
T ss_pred cchhhcccchhHHHHHHHHhhcccccceeeccHHHHHHHHHHhcccCcchHHHHHhheeccccchHhhhhHHhhccccc-
Confidence 3467899999999999998544 2 99999999999999999999999999999999965 4455 6666655443
Q ss_pred CCCCCCCCeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCCCcc
Q 036497 78 DGSANGGPRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSVDDS 157 (375)
Q Consensus 78 ~~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~~~~ 157 (375)
++.++..+..||++|++++++++++|+..++.+|.+++..+||.++|+.++.+||+|++++|+|+|+++++.+.+.+|
T Consensus 115 --sp~~~y~le~AnalWvqedyplke~yv~n~r~yy~aevtnlDF~~~p~~s~dtINkWvEekT~gkIkdlVp~~~i~~d 192 (410)
T COG4826 115 --SPNDSYELETANALWVQEDYPLKENYVNNVRNYYDAEVTNLDFVNKPDASRDTINKWVEEKTNGKIKDLVPEDYIGPD 192 (410)
T ss_pred --CCccchhhhhhhhHHHhcCCCCCHHHHHHHHhhhhcceeecccccCchHHHHHHHHHHHHhhcchHhhcCCccccCCc
Confidence 466778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeeecCCeEEEEecccC------------CCh
Q 036497 158 SKLVFANALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTAFDGFKVLVLPYKQ------------DEL 225 (375)
Q Consensus 158 t~lvlvna~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~~~~vveLPy~~------------~~l 225 (375)
++++|+||+||+|+|...|++..|.++.|+...|..+.|+||++.+.+.|++..++++|||||++ ..+
T Consensus 193 ~rlvltnAiYFnGkW~~efDk~~t~krtFy~a~~~d~sv~mMs~~g~fny~et~kakiveLPy~gd~lSmYIvLPk~nNi 272 (410)
T COG4826 193 TRLVLTNAIYFNGKWWPEFDKQMTGKRTFYPAKGEDKSVDMMSICGDFNYGETSKAKIVELPYKGDDLSMYIVLPKDNNI 272 (410)
T ss_pred eeEEEEeeEEEcCeeccccchhhccceeeecCChhhhcchhHHhcCCCCcccCcCceEEEcccCCCceEEEEEeeCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999998 457
Q ss_pred HHHHHHccCcHHHHhccCCcccee-eeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCCC-CccceeeeeE
Q 036497 226 PALEKKTGSQSGFLKDHIPYEMIE-VGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDSH-VGVGIFQKSF 303 (375)
Q Consensus 226 ~~l~~~L~~~~~~l~~~~~~~~~~-~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~-~vs~~~qk~~ 303 (375)
.++++.++. +.+..++..++.. .+++.||||+.+++..|+++|..||+.++|++ .||||||++.+ .|++++|+++
T Consensus 273 ~~Fe~nft~--e~y~elk~~m~~~~~v~v~iPkFkfetk~el~~aLieMGvvdAF~n-~AnFSgI~~~~L~Is~V~Hqa~ 349 (410)
T COG4826 273 TEFENNFTL--EKYTELKSNMEDQDEVEVEIPKFKFETKTELKDALIEMGVVDAFEN-TANFSGISDRRLEISDVFHQAF 349 (410)
T ss_pred HHHHhhccH--HHHHHHHhcCCccceEEEEecceeeeehhhhhHHHHHhhHHHHhhc-ccCcccccCCcccHHHHhhhhh
Confidence 888888873 3344444443332 57899999999999999999999999999996 89999999999 9999999999
Q ss_pred EEEcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEeCCcc
Q 036497 304 IEVKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMFSILS 362 (375)
Q Consensus 304 iev~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~p~ 362 (375)
|+|+|+||+|||+|+++....|+..+ -.+|++||||+|+|.|+.||.|||||+|.+|+
T Consensus 350 idv~EeGteAaAAT~v~~~a~~~~~~-~~e~~vD~PFlf~i~D~~s~~IlFiG~Vv~P~ 407 (410)
T COG4826 350 IDVDEEGTEAAAATAVVFKAVCAKGG-WVEFVVDHPFLFVIEDRRSGCILFIGKVVNPE 407 (410)
T ss_pred eeccccchhhhhhceeeeeeeeeccc-ceEEEecCceEEEEecCCcceEEEEeeecCCC
Confidence 99999999999999888777777543 34999999999999999999999999999996
No 2
>KOG2392 consensus Serpin [Defense mechanisms]
Probab=100.00 E-value=8.8e-74 Score=548.27 Aligned_cols=351 Identities=38% Similarity=0.581 Sum_probs=313.0
Q ss_pred hHHhhhhhhhHHHHHHHHhcCCC---C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCChh---hHH-HHHHHHHHH
Q 036497 4 VLESISEQTDITLSLSKHIKAPT---S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSNE---QQN-FASELVAIV 75 (375)
Q Consensus 4 ~~~~~~~~~~f~~~l~~~~~~~~---~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~---~~~-~~~~l~~~l 75 (375)
+........+|+++||+.+.... + +|||+||.++|+|+++||+|+|++||+++|+++..+ .++ .++.+....
T Consensus 4 ~~~~~~~~~~f~~~l~~~~~~~~~~~Ni~fSP~SI~~aL~m~~lGa~g~T~~qi~~~L~~~~~~~~~~~~~~~~~~~~~~ 83 (380)
T KOG2392|consen 4 MASLSQSEADFALDLYRQLAKSAPDENVVFSPLSISSALAMVSLGAKGETADQILKALHFNSTDEENEVHESFQSLLLLL 83 (380)
T ss_pred hhhhhhhhhHHHHHHHHHHHhhCCCCCEEEChHHHHHHHHHHHhcCCccHHHHHHHHhCCCCCcchHHHHHHHHHHHHHh
Confidence 44556778999999999999532 3 999999999999999999999999999999999653 345 666665422
Q ss_pred HhCCCCCCCCeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCCC
Q 036497 76 FADGSANGGPRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSVD 155 (375)
Q Consensus 76 ~~~~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~~ 155 (375)
.....+..++++|++|+++++.+.++|.+.++++|+++++.+||.++++.+++.||.|++++|+|+|++++++++++
T Consensus 84 ---~~~~~~~~l~~an~l~~~~~~~~~~~f~~~~~~~y~a~~~~~dF~~~~e~~~~~IN~wv~~~T~gkI~~ll~~~~~~ 160 (380)
T KOG2392|consen 84 ---NSTESGYELKLANRLFVSKSLKLLQKFLELVKKLYKAEAESLDFSNDTEEAAKEINEWVEEHTNGKIKDLLSPDSID 160 (380)
T ss_pred ---ccccCCceEEEeeeheecCCccccHHHHHHHHHHHhCcceeecCccChHHHHHHHHHHHHHHcCCchhhhcCCCCCC
Confidence 23456789999999999999999999999999999999999999965789999999999999999999999999999
Q ss_pred ccCeeEEEEeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeee--cCCeEEEEecccC-----------
Q 036497 156 DSSKLVFANALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTA--FDGFKVLVLPYKQ----------- 222 (375)
Q Consensus 156 ~~t~lvlvna~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~--~~~~~vveLPy~~----------- 222 (375)
+.|.++|+||+||+|.|+.+|++..|+..+|++.+++.++||||++.+.+.|.. +..+++++|||++
T Consensus 161 ~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~VpmM~~~~~f~~~~~~~l~~~vl~LpY~~~~~sm~i~LP~ 240 (380)
T KOG2392|consen 161 SLTVLVLVNAIYFKGKWEKKFDKELTKESDFFLSEGTSVKVPMMHQEGSFRYAEDEDLFAVVLELPYKGSNLSMLILLPD 240 (380)
T ss_pred cchhheeeehheeehhhcCCCChhhccccccEECCCeEEEeechhccCccceEEeCCcceEEEECccCCCCeEEEEEeCC
Confidence 999999999999999999999999999999999999999999999999776544 4589999999997
Q ss_pred --CChHHHHHHccCcHHHHhccC-CccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCCC--Cccc
Q 036497 223 --DELPALEKKTGSQSGFLKDHI-PYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDSH--VGVG 297 (375)
Q Consensus 223 --~~l~~l~~~L~~~~~~l~~~~-~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~--~vs~ 297 (375)
+||.+++++|+. ..+..|. +......++|.||||+++.++||+++|++|||+++|++..|||++|+.++ +|++
T Consensus 241 ~~~gL~~le~~L~~--~~~~~~~~~~~~~~~v~v~lPKfkie~~~dL~~~L~~lGi~~~F~~~~adls~ls~~~~l~vs~ 318 (380)
T KOG2392|consen 241 ERDGLKELEKKLTS--ETLVEWLFSRMSEKVVEVSLPKFKIEFDYDLKEVLKQLGITDIFSESKADLSGLSESSNLYISK 318 (380)
T ss_pred CCCCHHHHHHHhCh--hhHHHhhhhhhhceeEEEECCCEEEEEEechHHHHHHcCChhccCCCccccccCccCCCeeeee
Confidence 589999999974 3444555 56667778999999999999999999999999999999669999999985 9999
Q ss_pred eeeeeEEEEcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEeCCc
Q 036497 298 IFQKSFIEVKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMFSIL 361 (375)
Q Consensus 298 ~~qk~~iev~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~p 361 (375)
++||+.|||||+||+|||+|.+....++.+. +.+|.|||||+|+|+|+.|+.|||+|+|.+|
T Consensus 319 v~Hka~ieV~E~GteAaaat~~~~~~~~~~~--~~~f~adhPFlF~I~~~~t~~iLF~G~v~~P 380 (380)
T KOG2392|consen 319 VIHKAFIEVDEEGTEAAAATAVEIVLRSLPP--PEEFVADHPFLFVIRDNKTGSILFLGRVVDP 380 (380)
T ss_pred eeEEEEEEECCCCchhhhhhhhHHhhccCCC--CCeEECCCCEEEEEEECCCCcEEEEEEccCC
Confidence 9999999999999999999997666665533 5699999999999999999999999999998
No 3
>cd02044 ov-serpin ovalbumin family of serpins (ov-serpins). Family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). This subgroup corresponds to clade B of the serpin superfamily. In general, serpins exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia.
Probab=100.00 E-value=1.1e-73 Score=550.52 Aligned_cols=344 Identities=28% Similarity=0.412 Sum_probs=304.2
Q ss_pred hhhhhHHHHHHHHhcCCC---C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCChhhHH-HHHHHHHHHHhCCCCCC
Q 036497 9 SEQTDITLSLSKHIKAPT---S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSNEQQN-FASELVAIVFADGSANG 83 (375)
Q Consensus 9 ~~~~~f~~~l~~~~~~~~---~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~~~~-~~~~l~~~l~~~~~~~~ 83 (375)
.++++||++||+++.... + ++||+||+.+|+||+.||+|+|++||.++||++..++++ .++.+...+.. ...
T Consensus 3 ~~~~~F~~~l~~~~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~---~~~ 79 (370)
T cd02044 3 LANSAFAVDVFKELSKKSALQNVFFSPIAIMSSLAMVYLGAKGSTANQIGKVLHFDNVKDVHSSFQTLLSDINK---LNS 79 (370)
T ss_pred chhhHHHHHHHHHHhhcCCCCcEEECHHHHHHHHHHHhhhcCCcHHHHHHHHhCCCCHHHHHHHHHHHHHHHhc---CCC
Confidence 467899999999997643 3 999999999999999999999999999999998766676 88888776652 234
Q ss_pred CCeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCCCccCeeEEE
Q 036497 84 GPRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSVDDSSKLVFA 163 (375)
Q Consensus 84 ~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~~~~t~lvlv 163 (375)
+..+.++|++|++++++++++|.+.++++|+++++.+||.+++..+++.||+||+++|+|+|++++++++++++|+++|+
T Consensus 80 ~~~l~~a~~~~~~~~~~l~~~f~~~~~~~~~~~~~~vdF~~~~~~a~~~IN~wv~~~T~g~I~~lv~~~~l~~~t~lvlv 159 (370)
T cd02044 80 FYSLKLVNRLYGEKRYNFLPEFLSSTKKPYAKELETVDFKDKAEETRGQINSWIKDQTKGKIENLLPENSVDSQTAMVVV 159 (370)
T ss_pred CceEeeeeehhhcCCCcccHHHHHHHHHhhccceEeccccCCHHHHHHHHHHHHHHhcCCchhhcCCCCCCCcchhheee
Confidence 56899999999999999999999999999999999999998777899999999999999999999998899999999999
Q ss_pred EeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeee--cCCeEEEEecccC-------------CChHHH
Q 036497 164 NALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTA--FDGFKVLVLPYKQ-------------DELPAL 228 (375)
Q Consensus 164 na~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~--~~~~~vveLPy~~-------------~~l~~l 228 (375)
||+||+|.|+.||++..|..++|+..+|+++.||||++.+.++|.+ ..++++|+|||++ .+|.++
T Consensus 160 nai~Fkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~vv~LPy~~~~~sm~iiLP~~~~~l~~l 239 (370)
T cd02044 160 NAAYFKGKWMKKFSEEETKESPFRVNKTETKPVQMMYMEATFNMGNIESLKMKILELPFANKDLSMFILLPDEVTGLEKL 239 (370)
T ss_pred eeeeEcccccCCCChhhCccCcCCcCCCcEEEeeCccccCceeeEEcCCCCeEEEEcccCCCceEEEEEcCCCCCcHHHH
Confidence 9999999999999999999999999999999999999988777654 3489999999987 568899
Q ss_pred HHHccCcHHHHhccCC--ccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCCC--CccceeeeeEE
Q 036497 229 EKKTGSQSGFLKDHIP--YEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDSH--VGVGIFQKSFI 304 (375)
Q Consensus 229 ~~~L~~~~~~l~~~~~--~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~--~vs~~~qk~~i 304 (375)
++.|+. ..+..+.. ..+...++|.||||++++++||+++|++||++++|++..|||++|++.+ +|++++|++.|
T Consensus 240 ~~~l~~--~~l~~~~~~~~~~~~~v~l~lPkF~i~~~~~l~~~L~~mGl~~~F~~~~Adfs~ms~~~~l~vs~v~qka~i 317 (370)
T cd02044 240 ESEINY--EKLNKWTSPSTMAEAKVKVYLPRFKMEKMYDLKSVLESLGMKDAFSEGRANFSGMSETKGLALSNVIHKASL 317 (370)
T ss_pred HHHhCH--HHHHHhhccccceeeEEEEEeeEEEEeeEEccHHHHHHcCchhhCCCCCCChhhcCCCCCeeEeeeeEeeEE
Confidence 999863 34544442 3344556899999999999999999999999999998679999999754 99999999999
Q ss_pred EEcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEeCCc
Q 036497 305 EVKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMFSIL 361 (375)
Q Consensus 305 ev~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~p 361 (375)
+|||+|++|+|+|......++. +.+|++||||+|+|+|+.||.|||+|+|.+|
T Consensus 318 evdE~Gt~aaa~t~~~~~~~~~----~~~f~~drPF~f~I~~~~t~~iLF~G~v~~P 370 (370)
T cd02044 318 EINEDGTEAAEVTGAVMLQRSV----KEEFNADHPFLFIIRHNKTNCILFFGKFSSP 370 (370)
T ss_pred EECCCccccccccceeeeccCC----CCeEEeeCCEEEEEEECCCCeEEEEEEecCC
Confidence 9999999999999754333332 3589999999999999999999999999988
No 4
>cd02054 angiotensinogen Angiotensinogen is part of the renin-angiotensin system (RAS), which plays an important role in blood pressure regulation, renal haemodynamics, fluid and electrolyte homeostasis. It is also involved in normal and abnormal growth processes. The growth promoting actions of angiotensin have been shown in a variety of cells and tissues. This subgroup represents clade A8 of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones.
Probab=100.00 E-value=3.6e-73 Score=545.29 Aligned_cols=338 Identities=18% Similarity=0.267 Sum_probs=290.9
Q ss_pred hhhhhhhHHHHHHHHhcCCC---C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCChh------------hHH-HHH
Q 036497 7 SISEQTDITLSLSKHIKAPT---S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSNE------------QQN-FAS 69 (375)
Q Consensus 7 ~~~~~~~f~~~l~~~~~~~~---~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~------------~~~-~~~ 69 (375)
+.+++++||++||+++...+ + ++||+||+.+|+|++.||+|+|++||.++||++... ++. .++
T Consensus 2 ~~~~~~~f~~~l~~~l~~~~~~~N~v~SP~Si~~aL~ml~~GA~G~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (372)
T cd02054 2 LAMLVNVLGLRMYGMLSELWVHTNTLLSPTSVFGTLASLYLGASKKTADSLQALLGLPWKSKNSDCTSRVDGHKVLSTLQ 81 (372)
T ss_pred hHHHHHHHHHHHHHHHHhhCCCCCEEEChHHHHHHHHHHHcCCCccHHHHHHHHhCCCcccccccccccccHHHHHHHHH
Confidence 35678899999999997532 3 999999999999999999999999999999997421 222 455
Q ss_pred HHHHHHHhCCCCCCCCeEEEEEeeeecCCCCcchHHHHHHHhhhCCe-eeEeeCCCChHHHHHHHHHHHHHHhccccccc
Q 036497 70 ELVAIVFADGSANGGPRLSVANGVWIDQSLSFKNTFKQTVDNIYKAS-SHQVDFQNKAVEVSREINFWAEKETNGFIKEV 148 (375)
Q Consensus 70 ~l~~~l~~~~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~-~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~ 148 (375)
.+...+. .......+..+|++|++++++++++|++.++++|+++ ++.+||.+ ++.+++.||+||+++|+|+|+++
T Consensus 82 ~~~~~~~---~~~~~~~l~~a~~i~~~~~~~l~~~f~~~~~~~y~a~~~~~vdF~~-~~~a~~~IN~WV~~~T~g~I~~l 157 (372)
T cd02054 82 AIQSLVD---AQGRQLLLSTVVWTFTAPGIHLSQPFVQGLADFSDASFPRSVDFTE-PDVAEEKINNFVQATSDGKVKSS 157 (372)
T ss_pred HHHHHHc---CCCCccEEEEEEEEEecCCCCccHHHHHHHHHHhCcccceeecCCC-hHHHHHHHHHHHHHHhcCchhhh
Confidence 5554442 2234567999999999999999999999999999997 99999986 67889999999999999999999
Q ss_pred CCCCCCCccCeeEEEEeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeeecC--CeEEEEecccC----
Q 036497 149 LPPGSVDDSSKLVFANALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTAFD--GFKVLVLPYKQ---- 222 (375)
Q Consensus 149 l~~~~~~~~t~lvlvna~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~--~~~vveLPy~~---- 222 (375)
++ +++++|+++|+||+||+|.|+.||++..|. +|+..+|..++||||++.+.+.|.+.+ ++++++|||++
T Consensus 158 l~--~~~~~t~lvLvNaiyFkg~W~~~F~~~~T~--~f~~~~~~~~~V~mM~~~~~~~y~~~~~~~~~vleLPy~~~~sm 233 (372)
T cd02054 158 LK--GLSPDSDLLFATSVHFQGNWKTASQLEEPQ--EFWVDNNTSVSVPMLSHTGTFKYLSDIQDNFSITQLPLSKRACL 233 (372)
T ss_pred cc--CCCCCCeEEEEEEEEEEHhhcCCCCcccce--eEEeCCCCEEEEeeeeccCcEEEEEecCCCcEEEEEeeCCCeEE
Confidence 95 688999999999999999999999999986 688888999999999999888877654 88999999986
Q ss_pred --------CChHHHHHHccCcHHHHhccCCccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCCC-
Q 036497 223 --------DELPALEKKTGSQSGFLKDHIPYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDSH- 293 (375)
Q Consensus 223 --------~~l~~l~~~L~~~~~~l~~~~~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~- 293 (375)
.+|.++++.|+. ..+..+....+...++|.||||++++++||+++|++||++++|+. .|||++|++.+
T Consensus 234 ~iiLP~~~~~l~~l~~~L~~--~~l~~~~~~~~~~~v~v~lPkF~i~~~~~L~~~L~~lGi~~~F~~-~Adfs~i~~~~l 310 (372)
T cd02054 234 LLVQPHEGSDLDKVEGKLPQ--QNSSNWLKNLSPRTIELTLPKFSLQGSYDLQDLLAQMELPALLGS-EANLSKLSNDRF 310 (372)
T ss_pred EEEeCCCCCCHHHHHHhhCH--HHHHHHHHhCCceEEEEECCeEEEEEEeccHHHHHHcCCcccccC-ccccccccCCCc
Confidence 569999999963 344444444444556899999999999999999999999999986 89999999666
Q ss_pred CccceeeeeEEEEcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEeCCc
Q 036497 294 VGVGIFQKSFIEVKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMFSIL 361 (375)
Q Consensus 294 ~vs~~~qk~~iev~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~p 361 (375)
+|++++||+.|||||+||+|+|+|... . . +.+.+|+|||||+|+|+|+.||.|||+|+|.+|
T Consensus 311 ~vs~v~hka~ieVdE~GteAaaat~~~---~-~--~~~~~f~~drPF~f~I~d~~t~~iLF~G~v~~P 372 (372)
T cd02054 311 TVGKVLNKVFFELSEDGTEVQESTQQL---N-K--PEVLEVTLNRPFLFAVYEANSNAILFLGRVTNP 372 (372)
T ss_pred eeeeeeeeEEEEEccCceecccccccc---c-C--CCCceEEecCCEEEEEEECCCCcEEEEEEecCC
Confidence 999999999999999999999999742 1 1 124589999999999999999999999999988
No 5
>cd02043 plant_SERPIN SERine Proteinase INhibitors (serpins), plant specific subgroup. It has been suggested that plant serpins play a role in defense against insect predators. This subgroup corresponds to clade P of the serpin superfamily. In general, serpins exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones.
Probab=100.00 E-value=2.4e-73 Score=549.73 Aligned_cols=350 Identities=56% Similarity=0.875 Sum_probs=304.4
Q ss_pred hhhHHHHHHHHhcCCC----C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCChhhHH-HHHHHHHHHHhCCCCCCC
Q 036497 11 QTDITLSLSKHIKAPT----S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSNEQQN-FASELVAIVFADGSANGG 84 (375)
Q Consensus 11 ~~~f~~~l~~~~~~~~----~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~~~~-~~~~l~~~l~~~~~~~~~ 84 (375)
+++||++||+++...+ + |+||+||+.+|+||++||+|+|++||.++||++..++++ .++.+.+.+..+.....+
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~N~v~SP~si~~aL~ml~~GA~g~T~~ql~~~L~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 82 (381)
T cd02043 3 QCLVAMRLSGHVAAAAGKGSNVIFSPLSINVALSLVAAGARGETLDQLLSFLGSPSTDELHAVAASIVDLVLADASASGG 82 (381)
T ss_pred hHHHHHHHHHHHhccCCCCCcEEECHHHHHHHHHHHhcccCCcHHHHHHHHhCCCChHHHHHHHHHHHHHHhhhcccCCC
Confidence 6789999999998763 2 999999999999999999999999999999998666666 777777665432122345
Q ss_pred CeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCCCccCeeEEEE
Q 036497 85 PRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSVDDSSKLVFAN 164 (375)
Q Consensus 85 ~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~~~~t~lvlvn 164 (375)
..+.++|+||++++++++++|++.++++|+++++.+||.++++.+++.||+||+++|+|+|++++++++++++|+++++|
T Consensus 83 ~~l~~an~l~~~~~~~~~~~f~~~~~~~y~~~~~~vdF~~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~i~~~t~l~lvn 162 (381)
T cd02043 83 PRLSFANGVWVDKSLSLKPSFKDLAANSYKAEARPVDFRTKAEEVRREVNSWVEKATNGLIKDILPPGSVDSSTKLVLAN 162 (381)
T ss_pred cEEehhhhHHHhCCCCcCHHHHHHHHhhhhccceeecCCCCHHHHHHHHHHHHHHHhcChHHhhCCCCCcCCCceEEEEe
Confidence 68999999999999999999999999999999999999977788999999999999999999999888999999999999
Q ss_pred eEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeeecCCeEEEEecccC-------------------CCh
Q 036497 165 ALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTAFDGFKVLVLPYKQ-------------------DEL 225 (375)
Q Consensus 165 a~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~~~~vveLPy~~-------------------~~l 225 (375)
|+||+|.|++||++..|.+++||..+|+++.||||++.+.++|.+.+++++|+|||++ .+|
T Consensus 163 ai~Fkg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~~~~~~~~~~~~~~veLPy~~~~~~~~~~~sm~iiLP~~~~~L 242 (381)
T cd02043 163 ALYFKGAWSSKFDASDTKDRDFHLLDGTSVRVPFMSSEKDQYVAAFDGFKVLRLPYKRGGHDDARQFSMYIYLPDKKDGL 242 (381)
T ss_pred eeEEeeeeccCCccccCccccceeCCCCeEEeeeeeccCcccccccCCCEEEEcCCCCCCCCCCCcEEEEEEccCCCCCH
Confidence 9999999999999999999999999999999999998876667666789999999963 458
Q ss_pred HHHHHHccCcHHHHhccCCccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcC---CC-Cccceeee
Q 036497 226 PALEKKTGSQSGFLKDHIPYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVD---SH-VGVGIFQK 301 (375)
Q Consensus 226 ~~l~~~L~~~~~~l~~~~~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~---~~-~vs~~~qk 301 (375)
.+++++|......+..+....+...++|.||||++++++||+++|++||++++|++ .+++.+++. .+ +|++++|+
T Consensus 243 ~~l~~~l~~~~~~~~~~~~~~~~~~v~l~lPKF~i~~~~dl~~~L~~mGl~~~F~~-~~~~~~~~~~~~~~l~vs~v~hk 321 (381)
T cd02043 243 ADLLEKLVSEPGFLDRHIPASEQEVGAFMIPKFKFSFGFEASEVLKKLGLTLPFDP-GGALLSMSSPEGENLYVSSVYHK 321 (381)
T ss_pred HHHHHhhccChhhhhhhcccceeeEEEEEcccEEEEeecchHHHHHHCCCccccCC-ccccccCccCCCCCeeEEeeeeE
Confidence 88999986544455556666566667899999999999999999999999999998 666666542 34 99999999
Q ss_pred eEEEEcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEeCCc
Q 036497 302 SFIEVKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMFSIL 361 (375)
Q Consensus 302 ~~iev~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~p 361 (375)
+.|+|||+||+|+|+|......++.+.+++.+|+|||||+|+|+|+.||.|||+|+|.+|
T Consensus 322 a~ieVdE~Gt~aaa~t~~~~~~~~~~~~~~~~f~~drPF~f~I~~~~t~~iLF~G~v~~P 381 (381)
T cd02043 322 ACVEVDEEGTEAAAATAVVMSGTSSPPPRPVDFVADHPFLFLIREDKTGVVLFLGQVMNP 381 (381)
T ss_pred EEEEECCCcceehhccceeeccccCCCCCCceEEecCCEEEEEEECCCCcEEEEEEecCC
Confidence 999999999999999985444344333445689999999999999999999999999998
No 6
>cd02048 neuroserpin Neuroserpin is a inhibitory member of the SERine Proteinase INhibitor (serpin) family that reacts preferentially with tissue-type plasminogen activator (tPA). It is located in neurons in regions of the brain where tPA is also found, suggesting that neuroserpin is the selective inhibitor of tPA in the central nervous system (CNS). This subgroup corresponds to clade I of the serpin superfamily.
Probab=100.00 E-value=8.4e-74 Score=553.95 Aligned_cols=348 Identities=28% Similarity=0.474 Sum_probs=305.0
Q ss_pred hhhhhHHHHHHHHhcCCC---C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCChh--hHH-HHHHHHHHHHhCCCC
Q 036497 9 SEQTDITLSLSKHIKAPT---S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSNE--QQN-FASELVAIVFADGSA 81 (375)
Q Consensus 9 ~~~~~f~~~l~~~~~~~~---~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~--~~~-~~~~l~~~l~~~~~~ 81 (375)
++.++||++||+++...+ + |+||+||+.+|+||+.||+|+|++||.++||++... +.. .++.+...+.. .
T Consensus 2 ~~~~~Fa~~l~~~~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~---~ 78 (388)
T cd02048 2 EAIAELSVDLYNALRASKEDENIIFSPLSTALALGMVELGAKGSALKEIRHSLGYDGLKNGEEFSFLKDLSSMITA---K 78 (388)
T ss_pred chhhHHHHHHHHHhhccCCCCcEEEChHHHHHHHHHHhhhcCCcHHHHHHHHhCCCCCChHHHHHHHHHHHHHhcc---C
Confidence 467899999999997653 2 999999999999999999999999999999998642 333 56666655532 2
Q ss_pred CCCCeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCCCccCeeE
Q 036497 82 NGGPRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSVDDSSKLV 161 (375)
Q Consensus 82 ~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~~~~t~lv 161 (375)
.....+.++|++|++++++++++|++.++++|+++++.+||.+ ++.+++.||+|++++|+|+|++++++.+++++|+++
T Consensus 79 ~~~~~l~~an~i~v~~~~~l~~~f~~~~~~~f~~~~~~vdF~~-~~~~~~~IN~wv~~~T~g~I~~l~~~~~l~~~t~lv 157 (388)
T cd02048 79 EKEYVFNLANSLYLQNGFHVKEKFLQSNKKYFNAAVKLVDFSQ-VKAVAEHINKWVENHTNNKIKDMFSSRDFTPLTRLV 157 (388)
T ss_pred CCccchHHhhhhHhhcCCCccHHHHHHHHHHhcCeeEEECCCC-hHHHHHHHHHHHHHhccCchhhcCCCccCCHHHHHH
Confidence 3456799999999999999999999999999999999999987 578999999999999999999999888899999999
Q ss_pred EEEeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeeecC--------CeEEEEecccC-----------
Q 036497 162 FANALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTAFD--------GFKVLVLPYKQ----------- 222 (375)
Q Consensus 162 lvna~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~--------~~~vveLPy~~----------- 222 (375)
|+||+||+|.|++||++..|...+|+..+|+.++||||++.+.++|++.+ ++++|+|||++
T Consensus 158 lvNai~Fkg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~~~~~y~~~~~~~~~~~~~~~vv~LPy~~~~~sm~iiLP~ 237 (388)
T cd02048 158 LVNALYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLELPYEGDEISLMIILSR 237 (388)
T ss_pred hhheEEEeeeccCCCCHHHCeeccEEECCCceEEeehhcccCcEEEEeccccccccccCcEEEEEecCCCceEEEEEccC
Confidence 99999999999999999999999999999999999999999988887754 48999999986
Q ss_pred --CChHHHHHHccCcHHHHhccCCccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCCC--Cccce
Q 036497 223 --DELPALEKKTGSQSGFLKDHIPYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDSH--VGVGI 298 (375)
Q Consensus 223 --~~l~~l~~~L~~~~~~l~~~~~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~--~vs~~ 298 (375)
.+|.++++.|+. ..+..+....+...++|.||||++++++||+++|++||++++|++ .|||++|++++ +|+++
T Consensus 238 ~~~~l~~l~~~l~~--~~l~~~~~~~~~~~v~l~lPkF~i~~~~~l~~~L~~lGi~~~F~~-~adfs~i~~~~~l~vs~v 314 (388)
T cd02048 238 QEVPLATLEPLVKA--PLIEEWANSVKKQKVEVYLPRFKVEQKIDLKDVLKNLGITEIFSG-GADLSGISDSKELYVSKV 314 (388)
T ss_pred CCCCHHHHHHHhCh--HHHHHHHHhCceeEEEEEccEEEEEEEechHHHHHHcCCchhhcC-ccCcccccCCCCeEEEEE
Confidence 578999999963 345555555555667999999999999999999999999999996 89999999765 99999
Q ss_pred eeeeEEEEcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEeCCcchhh
Q 036497 299 FQKSFIEVKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMFSILSIIN 365 (375)
Q Consensus 299 ~qk~~iev~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~p~~~~ 365 (375)
+|++.|+|||+|++|+|+|......++.. .+.+|+|||||+|+|+|+.||.|||+|+|.+|+..+
T Consensus 315 ~hka~ieV~E~Gt~a~a~t~~~~~~~~~~--~~~~f~~nrPF~f~I~d~~t~~iLF~G~v~~P~~~~ 379 (388)
T cd02048 315 FHKVFLEVNEEGSEAAASSGMIAISRMAV--LYPQVIVDHPFFFLIRNRRTGSILFMGRVMHPETMT 379 (388)
T ss_pred EeeeEEEECCCcceehhhcccccccccCC--CCceEEecCCEEEEEEECCCCeEEEEEEecCCCccc
Confidence 99999999999999999997543334332 234899999999999999999999999999998765
No 7
>cd02059 ovalbumin_like The ovalbumin_like group of serpins contains ovalbumin, the squamous cell carcinoma antigen 1 (SCCA1) and other closely related serpins of clade B of the serpin superfamily. Ovalbumin, the major protein component of avian egg white, is a non-inhibitory member of SERine Proteinase INhibitorS (serpins). In contrast, SCCA1 inhibits cysteine proteinases such as cathepsin S, K, L, and papain, a so called cross-class serpin.
Probab=100.00 E-value=1.2e-72 Score=546.24 Aligned_cols=346 Identities=33% Similarity=0.464 Sum_probs=303.0
Q ss_pred hhhhhHHHHHHHHhcCCC---C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCCh-----------------hhHH-
Q 036497 9 SEQTDITLSLSKHIKAPT---S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSN-----------------EQQN- 66 (375)
Q Consensus 9 ~~~~~f~~~l~~~~~~~~---~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~-----------------~~~~- 66 (375)
.++++||++||+++.... + |+||+||+.+|+||+.||+|+|++||.++|+++.. .+++
T Consensus 3 ~~~~~Fa~~l~~~~~~~~~~~N~v~SP~si~~~L~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (389)
T cd02059 3 AANTEFCFDLFKELKKNHKNKNIFFSPLSISSALGMVLLGARDDTAAQIEKVLHFDHASGSGSSKPAASAQCNQSGGVHS 82 (389)
T ss_pred chhhHHHHHHHHHHhhcCCCCCEEECHHHHHHHHHHHhcccCCcHHHHHHHHhCCCccccccccccccccccccHHHHHH
Confidence 578999999999998642 3 99999999999999999999999999999999742 2355
Q ss_pred HHHHHHHHHHhCCCCCCCCeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhccccc
Q 036497 67 FASELVAIVFADGSANGGPRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIK 146 (375)
Q Consensus 67 ~~~~l~~~l~~~~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~ 146 (375)
.++.+...+.+ +..+..++++|+||++++++++++|++.++++|+++++.+||.+.++.+++.||+|++++|+|+|+
T Consensus 83 ~~~~l~~~~~~---~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~vdF~~~~~~~~~~IN~wv~~~T~g~I~ 159 (389)
T cd02059 83 QFKDLLSQINK---PNDDYELSIANRLYGEKTYPFHQEYLDCVEKLYRAKLEPVDFQNAAEASRKKINSWVESQTNGKIK 159 (389)
T ss_pred HHHHHHHHHcC---CCCCcEEEEeeehhhhCCCCccHHHHHHHHHHhcCeeEEEcCCCCHHHHHHHHHHHHHHhccchhh
Confidence 77777766642 345678999999999999999999999999999999999999986667889999999999999999
Q ss_pred ccCCCCCCCccCeeEEEEeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeee--cCCeEEEEecccC--
Q 036497 147 EVLPPGSVDDSSKLVFANALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTA--FDGFKVLVLPYKQ-- 222 (375)
Q Consensus 147 ~~l~~~~~~~~t~lvlvna~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~--~~~~~vveLPy~~-- 222 (375)
+++++++++++|+++++||+||+|.|+.+|++..|..++|+..+|+.++|+||++.+.+.|+. ..+++||+|||++
T Consensus 160 ~~~~~~~i~~~t~lvlvna~~Fkg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~~~~~~~~~~~~~~~vl~LPy~~~~ 239 (389)
T cd02059 160 NLFGKGTIDSSTVLVLVNAIYFKGKWEKKFEKENTVDAPFKLNENENKPVQMMYQIGKFKLASIEEPKMKILELPYAGGG 239 (389)
T ss_pred hcCCCCCCCcccceeeEeeeEEeeeccCCCCcccCccCccEeCCCceEEeehhcccCcEEEEEeCCCCcEEEEeecCCCc
Confidence 999988999999999999999999999999999999999999999999999999988776544 4589999999987
Q ss_pred -----------CChHHHHHHccCcHHHHhccC--CccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCC
Q 036497 223 -----------DELPALEKKTGSQSGFLKDHI--PYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEM 289 (375)
Q Consensus 223 -----------~~l~~l~~~L~~~~~~l~~~~--~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~i 289 (375)
.+|.+++++|+. ..+..+. ...+...++|.||||++++++||+++|++||++++|++..|||++|
T Consensus 240 ~sm~iiLP~~~~~L~~l~~~l~~--~~l~~~~~~~~~~~~~v~l~lPkF~i~~~~dl~~~L~~mGi~~~F~~~~adfs~~ 317 (389)
T cd02059 240 LSMIVLLPDEISGLEQLESKLTY--EKLMEWTSSENMRERKVEVYLPRFKLEEKYNLKSVLKAMGMTDIFSESKADLSGI 317 (389)
T ss_pred eEEEEEccCCCCCHHHHHHHhCH--HHHHHhhhhhcceeeEEEEECCCEEeeeeecHHHHHHHcCCccccCCcccccccc
Confidence 479999999963 2343333 2344556789999999999999999999999999999866999999
Q ss_pred cCCC--CccceeeeeEEEEcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEeCCc
Q 036497 290 VDSH--VGVGIFQKSFIEVKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMFSIL 361 (375)
Q Consensus 290 s~~~--~vs~~~qk~~iev~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~p 361 (375)
++++ +|++++|++.|||||+|++|+|+|......++. +++.+|+|||||+|+|+|+.||.|||+|+|.+|
T Consensus 318 ~~~~~l~v~~v~hka~ieV~E~G~~a~a~t~~~~~~~~~--~~~~~f~~nrPF~f~I~~~~t~~iLF~G~v~~P 389 (389)
T cd02059 318 SSSKSLYLSKAIHKSYVEVNEEGTEAAAATGAGIVEKSL--PVSEEFRADHPFLFFIRHNKTNTILFFGRFSSP 389 (389)
T ss_pred CCCCCceEeeeeeeEEEEECCCceeecccccceeeecCC--CCCceEEecCCEEEEEEECCCCeEEEEEEecCC
Confidence 9764 999999999999999999999999854443443 335689999999999999999999999999998
No 8
>cd02045 antithrombin-III_like Antithrombin is a serine proteinase inhibitor (serpin) which controls the process of coagulation. It is the most important anticoagulant molecule in mammalian circulation systems, controlled by its interaction with the co-factor, heparin, which accelerates its interaction with target proteases, such as thrombin and factor Xa. This subgroup corresponds to clade C of the serpin superfamily.
Probab=100.00 E-value=5.5e-73 Score=546.34 Aligned_cols=348 Identities=32% Similarity=0.503 Sum_probs=302.3
Q ss_pred HhhhhhhhHHHHHHHHhcCC----CC-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCC-----hhhHH-HHHHHHHH
Q 036497 6 ESISEQTDITLSLSKHIKAP----TS-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKS-----NEQQN-FASELVAI 74 (375)
Q Consensus 6 ~~~~~~~~f~~~l~~~~~~~----~~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~-----~~~~~-~~~~l~~~ 74 (375)
.+..++++||++||+++... .+ ++||+||+.+|+||+.||+|+|++||.++|+++. .++++ .++.+...
T Consensus 4 ~~~~~~~~Fa~~l~~~l~~~~~~~~Niv~SP~si~~aL~ml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~l~~~ 83 (381)
T cd02045 4 ELSKANSRFALAFYKHLADSKSNDENIFLSPLSISTAFAMTKLGACNNTLEQLMEVFQFDTISEKTSDQVHFFFAKLNCR 83 (381)
T ss_pred hhhhhhhHHHHHHHHHHhcccCCCCCEEECcHHHHHHHHHHhhhcCCcHHHHHHHHhCCCccccccHHHHHHHHHHHHHH
Confidence 45668899999999999753 23 9999999999999999999999999999999963 13455 67777666
Q ss_pred HHhCCCCCCCCeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCC
Q 036497 75 VFADGSANGGPRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSV 154 (375)
Q Consensus 75 l~~~~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~ 154 (375)
+... ...+..+.++|++|++++++++++|.+.++++|+++++.+||.++++.+++.||+|++++|+|+|+++++++++
T Consensus 84 ~~~~--~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~y~~~~~~vdF~~~~~~~~~~IN~wv~~~T~g~I~~ll~~~~l 161 (381)
T cd02045 84 LYRK--ANKSSELISANRLFGDKSLTFNETYQDISEIVYGAKLWPLDFKEKPELSRITINEWIANKTENRITDVIPEGAI 161 (381)
T ss_pred Hhcc--cCCcchhhhhhhhhhcCCCchhHHHHHHHHHhhcCeeEEecCCCCHHHHHHHHHHHHHHHHhhHHHhhCCCCCC
Confidence 5421 23456799999999999999999999999999999999999987677788999999999999999999988899
Q ss_pred CccCeeEEEEeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeeec--CCeEEEEecccC----------
Q 036497 155 DDSSKLVFANALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTAF--DGFKVLVLPYKQ---------- 222 (375)
Q Consensus 155 ~~~t~lvlvna~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~~--~~~~vveLPy~~---------- 222 (375)
+++|+++|+||+||+|.|+.||++..|..++||..+|++++||||++.+.+.|+.. .++++|+|||++
T Consensus 162 ~~~t~lvlvna~~Fkg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~~~~~y~~~~~~~~~~l~LPy~~~~~sm~iilP 241 (381)
T cd02045 162 DTNTVLVLVNAIYFKGLWKSKFDKENTRKDLFHKAPGEKCPVPMMYQESKFRYAKIPEDKVQVLELPYKGDDITMVLILP 241 (381)
T ss_pred CCccceeeEeeeEEeccccCCCCcccCcccccCcCCCcEEEEeccCccceeeeEecCCCCcEEEEeecCCCceEEEEEeC
Confidence 99999999999999999999999999999999999999999999999988888764 489999999986
Q ss_pred ---CChHHHHHHccCcHHHHhccCCccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCC---C-Cc
Q 036497 223 ---DELPALEKKTGSQSGFLKDHIPYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDS---H-VG 295 (375)
Q Consensus 223 ---~~l~~l~~~L~~~~~~l~~~~~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~---~-~v 295 (375)
.+|.+++++|+. ..+..++...+...++|.||||++++++||+++|++||++++|++..|||++|+.+ + +|
T Consensus 242 ~~~~~l~~l~~~l~~--~~l~~~~~~~~~~~v~v~lPkF~i~~~~~l~~~L~~lGi~~~F~~~~Adfs~i~~~~~~~l~v 319 (381)
T cd02045 242 KEGTTLSEVEQNLTL--DKLQGWLDAMKETTLAVQIPRFRVEDSFSVKEQLQKMGLEDLFSPENAKLPGIVAGGRTDLYV 319 (381)
T ss_pred CCCCCHHHHHHhcCH--HHHHHHHHhCcCcEEEEECCCEEEeeEecHHHHHHHcCCcccCCCCCCCccccccCCCCCcee
Confidence 569999999963 34544544444445689999999999999999999999999999867999999853 4 99
Q ss_pred cceeeeeEEEEcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEe
Q 036497 296 VGIFQKSFIEVKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMF 358 (375)
Q Consensus 296 s~~~qk~~iev~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v 358 (375)
++++||+.|+|||+|++|+|+|......++.+ .++++|++||||+|+|+|+.|+.|||+|||
T Consensus 320 s~v~hka~ieV~E~GteAaaat~~~~~~~s~~-~~~~~f~~nrPF~f~I~d~~t~~iLF~G~v 381 (381)
T cd02045 320 SDAFHKAFLEVNEEGSEASAATAVVITGRSLN-INRIIFVANRPFLLFIREVAINAIIFMGRV 381 (381)
T ss_pred eccceeeEEEECCCCeehhhhhhhhhhhccCC-CCCCEEEeeCCEEEEEEECCCCcEEEEEeC
Confidence 99999999999999999999997544445442 234689999999999999999999999996
No 9
>cd02057 maspin_like Maspin (mammary serine proteinase inhibitor), a member of the serpin superfamily, with a multitude of effects on cells and tissues at an assortment of developmental stages. Maspin has tumor suppressing activity against breast and prostate cancer. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones.
Probab=100.00 E-value=5.3e-73 Score=545.44 Aligned_cols=342 Identities=26% Similarity=0.370 Sum_probs=298.2
Q ss_pred hhhhhHHHHHHHHhcCCC---C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCChhhHH-HHHHHHHHHHhCCCCCC
Q 036497 9 SEQTDITLSLSKHIKAPT---S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSNEQQN-FASELVAIVFADGSANG 83 (375)
Q Consensus 9 ~~~~~f~~~l~~~~~~~~---~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~~~~-~~~~l~~~l~~~~~~~~ 83 (375)
.++++||++||+++...+ + ++||+||+.+|+||+.||+|+|++||.++||++...+++ .++.+...+.+ ...
T Consensus 3 ~~~~~F~~~l~~~~~~~~~~~Nvv~SP~si~~aL~ml~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~~---~~~ 79 (372)
T cd02057 3 LANTAFAVDLFKKLCEKEPTGNVVFSPICLSTSLALAQVGAKGDTANEIGKVLHFENVKDVPFGFQTVTSDVSK---LSS 79 (372)
T ss_pred chhhHHHHHHHHHHhccCCCCcEEECHHHHHHHHHHHHhhcCCcHHHHHHHHhCCCChhHHHHHHHHHHHHHhc---CCc
Confidence 478999999999997643 3 999999999999999999999999999999998655555 67777665532 123
Q ss_pred CCeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCCCccCeeEEE
Q 036497 84 GPRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSVDDSSKLVFA 163 (375)
Q Consensus 84 ~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~~~~t~lvlv 163 (375)
...+.++|++|++++++++++|.+.++++|+++++.+||.+++..+++.||+||+++|+|+|++++++++++++|+++++
T Consensus 80 ~~~l~~an~l~v~~~~~~~~~f~~~~~~~y~~~~~~vdF~~~~~~a~~~IN~wv~~~T~g~I~~l~~~~~i~~~t~l~lv 159 (372)
T cd02057 80 FYSLKLIKRLYVDKSLNLSTDFINSTKRPYPKELETVDFKDKLEETRGQINNSIKELTDGHFENILNENSVNDQTKILVV 159 (372)
T ss_pred cchhHhhhhhhhhCCCCccHHHHHHHHHHhcCeeEEecCCCCHHHHHHHHHHHHHHhccChhhhcCCCCCCCCCCceeee
Confidence 45689999999999999999999999999999999999998777899999999999999999999988899999999999
Q ss_pred EeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeee--cCCeEEEEecccC-----------------CC
Q 036497 164 NALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTA--FDGFKVLVLPYKQ-----------------DE 224 (375)
Q Consensus 164 na~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~--~~~~~vveLPy~~-----------------~~ 224 (375)
||+||+|.|+.||++..|..++|+..+|+.+.||||++.+.+.|+. ..++++|+|||++ .+
T Consensus 160 Na~yFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~vv~LPy~~~~~sm~iiLP~~~~~~~~~ 239 (372)
T cd02057 160 NAAYFVGNWMKKFPESETKECPFRVNKTETKPVQMMNLEATFSMGYIDELNTKILELPFQNKHLSMLILLPKDIEDESTG 239 (372)
T ss_pred ehheeccccCCCCCccccccCCCEECCCceEeeEhhheeceEEeEEeCCcCceEEEeecCCCCEEEEEEecCcccccccc
Confidence 9999999999999999999999999999999999999887766544 4589999999986 16
Q ss_pred hHHHHHHccCcHHHHhccCC--ccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCCC--Cccceee
Q 036497 225 LPALEKKTGSQSGFLKDHIP--YEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDSH--VGVGIFQ 300 (375)
Q Consensus 225 l~~l~~~L~~~~~~l~~~~~--~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~--~vs~~~q 300 (375)
|.++++.|+. ..+..+.. ..+...++|.||||++++++||+++|++||++++|++..|||++|++++ +|++++|
T Consensus 240 L~~l~~~l~~--~~l~~~~~~~~~~~~~v~l~lPKF~i~~~~~l~~~L~~lGi~~~F~~~~adfs~i~~~~~l~vs~v~h 317 (372)
T cd02057 240 LEKLEKQLTS--ESLSQWTNPSMMANAKVKVSLPKFKVEKMIDLKAMLESLGLKHIFNEDASDFSGMSETKGVALSNVIH 317 (372)
T ss_pred HHHHHHhcCh--hHHHHhhchhcceeEEEEEECCcEEEEEEechHHHHHHcCChhhcCCcccccccccCCCceEEEeeee
Confidence 8899999963 33444432 2334556899999999999999999999999999998679999999765 9999999
Q ss_pred eeEEEEcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEeCCc
Q 036497 301 KSFIEVKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMFSIL 361 (375)
Q Consensus 301 k~~iev~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~p 361 (375)
++.|||||+|++|+|+|.... . +.+..|+|||||+|+|+|+.|+.|||+|+|.+|
T Consensus 318 k~~ieVdE~Gt~a~a~t~~~~----~--~~~~~f~~nrPF~f~I~d~~t~~iLF~G~v~~p 372 (372)
T cd02057 318 KVCLEVNEDGGESIEVPGARI----L--QHKDEFNADHPFIFIIRHNKTRNIIFFGRFCSP 372 (372)
T ss_pred eeEEEECCCCeecchhcceec----c--CCCCeEEeeCCEEEEEEECCCCeEEEEEEecCC
Confidence 999999999999999987421 1 123579999999999999999999999999988
No 10
>cd02058 PAI-2 Plasminogen Activator Inhibitor-2 (PAI-2). PAI-2 is a serine protease inhibitor that belongs to the ov-serpin branch of the serpin superfamily. It is is an effective inhibitor of urinary plasminogen activator (urokinase or uPA) and is involved in cell differentiation, tissue growth and regeneration.
Probab=100.00 E-value=2.4e-72 Score=543.15 Aligned_cols=347 Identities=32% Similarity=0.471 Sum_probs=302.4
Q ss_pred hhhhhhHHHHHHHHhcCCC---C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCCh----hhHH-HHHHHHHHHHhC
Q 036497 8 ISEQTDITLSLSKHIKAPT---S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSN----EQQN-FASELVAIVFAD 78 (375)
Q Consensus 8 ~~~~~~f~~~l~~~~~~~~---~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~----~~~~-~~~~l~~~l~~~ 78 (375)
..++++||++||+++.... + ++||+||+.+|+||+.||+|+|++||.++||++.. .+++ .++.+.+.+.+
T Consensus 2 ~~~~~~F~~~l~~~~~~~~~~~N~v~SP~si~~aL~~l~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~~~~~- 80 (380)
T cd02058 2 SAANTSFALNLFKKLAESSPTKNIFFSPWSISSALAMVYLGAKGNTAAQMAKVLQFNEVGGNSEDIHSGFQSLLSEINK- 80 (380)
T ss_pred chhhhHHHHHHHHHHhhcCCCCcEEECHHHHHHHHHHHhcccCCcHHHHHHHHhCcCccccchHHHHHHHHHHHHHHhC-
Confidence 3578999999999997643 3 99999999999999999999999999999999764 4566 78888876642
Q ss_pred CCCCCCCeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCCCccC
Q 036497 79 GSANGGPRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSVDDSS 158 (375)
Q Consensus 79 ~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~~~~t 158 (375)
+.....+.++|+||++++++++++|++.++++|++++..+||.+++..+++.||+||+++|+|+|++++++++++++|
T Consensus 81 --~~~~~~l~~~n~l~~~~~~~l~~~f~~~~~~~~~~~~~~vdF~~~~~~a~~~IN~wv~~~T~g~I~~~~~~~~i~~~t 158 (380)
T cd02058 81 --PGTNYLLKSANRLYGEKTYPFLEKFLQLTQKYYQAEPQAVDFVEAAEQARKEINSWVERQTEGKIQNLLPPGSVDSLT 158 (380)
T ss_pred --CCCccEeehhhhhhhcCCCcHhHHHHHHHHhhhcCceEEecCCCCHHHHHHHHHHHHHHhcccchhhcCCcCCCChhH
Confidence 334568999999999999999999999999999999999999887778999999999999999999999888999999
Q ss_pred eeEEEEeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeee--cCCeEEEEecccC--------------
Q 036497 159 KLVFANALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTA--FDGFKVLVLPYKQ-------------- 222 (375)
Q Consensus 159 ~lvlvna~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~--~~~~~vveLPy~~-------------- 222 (375)
+++++||+||+|.|+.||++..|..++|+..+|+.++||||++.+.+.|.+ ..++++|+|||++
T Consensus 159 ~lvlvna~~Fkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~vv~LPy~~~~~sm~iiLP~~~~ 238 (380)
T cd02058 159 RLVLVNAIYFKGNWEEKFLKENTRERPFRLNKNTTKPVQMMFLKKKFPITYIEELKAQVLELPYVGKELSMFILLPDEIE 238 (380)
T ss_pred HhHhhheeEEccccCCCCCcccCCcccccCCCCceEEeechhhcCceeeEEcCCCCcEEEEccCCCCceEEEEEeccccc
Confidence 999999999999999999999999999999999999999999988766654 4588999999986
Q ss_pred ---CChHHHHHHccCcHHHHhccC--CccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCCC--Cc
Q 036497 223 ---DELPALEKKTGSQSGFLKDHI--PYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDSH--VG 295 (375)
Q Consensus 223 ---~~l~~l~~~L~~~~~~l~~~~--~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~--~v 295 (375)
.+|.+++++|+. ..+..+. ...+...++|.||||++++++||+++|++||++++|++..|||++|+.++ +|
T Consensus 239 ~~~~~L~~l~~~l~~--~~l~~~~~~~~~~~~~v~l~lPKF~i~~~~~l~~~L~~lGl~~~F~~~~adfs~i~~~~~l~v 316 (380)
T cd02058 239 DVTTGLEKLEKELTY--EKLNEWTSPEMMEEYEVEVYLPKFKLEESYDLKSTLSSMGMEDAFDPGKADFSGMSSANDLFL 316 (380)
T ss_pred cccchHHHHHHHhCH--HHHHHhhhhhcceeeEEEEEeeEEEEeeeeccHHHHHHcCccccCCcccccccCCCCCCCCcc
Confidence 247888888853 3344443 23344556899999999999999999999999999998679999998754 99
Q ss_pred cceeeeeEEEEcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEeCCc
Q 036497 296 VGIFQKSFIEVKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMFSIL 361 (375)
Q Consensus 296 s~~~qk~~iev~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~p 361 (375)
++++|++.|||||+|++|+|+|......++. +++++|+|||||+|+|+|+.|+.|||+|+|.+|
T Consensus 317 s~v~hk~~ieV~E~G~~a~a~t~~~~~~~~~--~~~~~f~~nrPF~f~I~d~~t~~iLF~G~v~~P 380 (380)
T cd02058 317 SKVFHKAFVEVNEEGTEAAAATAAIMMLRCL--MPSPRFNADHPFLFFIRHNKTNTILFFGRFCSP 380 (380)
T ss_pred cccceeeEEEECCCCcccccccchheeeccC--CCCCeEEEECCEEEEEEECCCCeEEEEEEecCC
Confidence 9999999999999999999999754433332 224689999999999999999999999999988
No 11
>cd02051 PAI-1_nexin-1 Plasminogen activator inhibitor-1_like. Plasminogen activator inhibitor-1 (PAI-1) is the primary, fast-acting inhibitor of plasminogen activators. It is often bound to vitronectin, an abundant component of the extracellular matrix in many tissues. Protease nexin-1 is a potent serpin able to inhibit thrombin, plasmin, and plasminogen activators. PAI-1 and nexin-1 are members of the serpin superfamily and represent clade E. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones.
Probab=100.00 E-value=3.5e-72 Score=540.70 Aligned_cols=344 Identities=25% Similarity=0.423 Sum_probs=300.7
Q ss_pred hhhhhhhHHHHHHHHhcCCC---C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCChhhHH-HHHHHHHHHHhCCCC
Q 036497 7 SISEQTDITLSLSKHIKAPT---S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSNEQQN-FASELVAIVFADGSA 81 (375)
Q Consensus 7 ~~~~~~~f~~~l~~~~~~~~---~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~~~~-~~~~l~~~l~~~~~~ 81 (375)
...+.++||++||+++.... + ++||+||+.+|+||+.||+|+|+.||.++||++. +++. .++.+.+.+.. .
T Consensus 7 ~~~~~~~F~~~l~~~~~~~~~~~N~v~SP~si~~~L~~l~~GA~g~T~~el~~~L~~~~-~~~~~~~~~l~~~l~~---~ 82 (377)
T cd02051 7 LEELGSDFGIQVFNQVAQARPQENVVVSPHGIASVLGMLQLGADGKTKKQLQTVMRYKI-NGVAKALKKLNKAIVS---K 82 (377)
T ss_pred HHHHHhHHHHHHHHHHHhcCCCCcEEECcHHHHHHHHHHHhhcCCcHHHHHHHHhCCCh-hHHHHHHHHHHHHHhc---c
Confidence 45688999999999997643 2 9999999999999999999999999999999975 3454 67777666532 2
Q ss_pred CCCCeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCC-CCCccCee
Q 036497 82 NGGPRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPG-SVDDSSKL 160 (375)
Q Consensus 82 ~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~-~~~~~t~l 160 (375)
.++..+.++|++|++++++++++|.+.++++|+++++.+||.+ ++.+++.||+|++++|+|+|++++++. .++++|++
T Consensus 83 ~~~~~l~~an~i~~~~~~~l~~~f~~~~~~~f~a~~~~vdF~~-~~~a~~~IN~Wv~~~T~g~I~~~l~~~~~i~~~t~l 161 (377)
T cd02051 83 KNKDIVTTANAVFAQSGFKMEVPFVPRNKEVFQCEVKSVDFSD-PETAAFSINDWVKNETKGMIDNLLSPDLADDALTRL 161 (377)
T ss_pred CCccchHHHHHHHhcCCCchhHHHHHHHHHHhcCeeEEECCCC-HHHHHHHHHHHHHHhcCCCccccCCCCCCCCccceE
Confidence 3345789999999999999999999999999999999999986 678999999999999999999999876 78889999
Q ss_pred EEEEeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeeec-----CCeEEEEecccC-------------
Q 036497 161 VFANALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTAF-----DGFKVLVLPYKQ------------- 222 (375)
Q Consensus 161 vlvna~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~~-----~~~~vveLPy~~------------- 222 (375)
+|+||+||+|.|+.||++..|.+++||..+|+.+.||||++.+.++|++. .++++|+|||++
T Consensus 162 ~lvnai~Fkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~~~~vv~LPy~~~~~sm~iiLP~~~ 241 (377)
T cd02051 162 VLVNALYFKGLWKSRFQPESTKKRTFHAGDGKTYQVPMLAQLSVFRSGSASTPNGLWYNIIELPYHGESISMLIALPTEK 241 (377)
T ss_pred EEEeeeEeeeeecCCCChhhCcccccCcCCCcEEeehhhcccCceeeEeeccccccccEEEEEecCCCeEEEEEEecccc
Confidence 99999999999999999999999999999999999999999887777653 248999999976
Q ss_pred -CChHHHHHHccCcHHHHhccCCccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCCC--Ccccee
Q 036497 223 -DELPALEKKTGSQSGFLKDHIPYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDSH--VGVGIF 299 (375)
Q Consensus 223 -~~l~~l~~~L~~~~~~l~~~~~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~--~vs~~~ 299 (375)
.+|.+++++|+. ..+..+.+..+...++|.||||++++++||+++|++||++++|++..|||++|++.+ +|++++
T Consensus 242 ~~~L~~l~~~l~~--~~l~~~~~~~~~~~v~v~lPkF~i~~~~~L~~~L~~lGl~~~F~~~~Adfs~i~~~~~l~v~~v~ 319 (377)
T cd02051 242 STPLSAIIPHIST--KTIQSWMGTMVPKRMQLVLPKFTVEAETDLKEPLKALGITDMFDQSKANFTKISRSESLHVSHAL 319 (377)
T ss_pred CCCHHHHHHhcCH--HHHHHHHHhCCceEEEEEccCEEEEEecChHHHHHHCCCcccccCCCCCcccccCCCCEEEEeEE
Confidence 258999999863 445555555555667999999999999999999999999999997689999998764 999999
Q ss_pred eeeEEEEcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEeCCc
Q 036497 300 QKSFIEVKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMFSIL 361 (375)
Q Consensus 300 qk~~iev~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~p 361 (375)
|++.|+|||+|++|+|+|......++. +.+|++||||+|+|+|+.||.|||+|+|.+|
T Consensus 320 hka~iev~E~Gt~aaa~t~~~~~~~~~----~~~f~~drPF~f~I~~~~t~~~LF~G~v~~P 377 (377)
T cd02051 320 QKAKIEVNEDGTKASAATTAILIARSS----PPWFIVDRPFLFFIRHNPTGTILFMGQINKP 377 (377)
T ss_pred EEEEEEECCCccchhhhcceeeeccCC----CCeEEeeCCEEEEEEeCCCCcEEEEEEecCC
Confidence 999999999999999999754444443 3479999999999999999999999999998
No 12
>cd02047 HCII Heparin cofactor II (HCII) inhibits thrombin, the final protease of the coagulation cascade. HCII is allosterically activated by binding to cell surface glycosaminoglycans (GAGs). The specificity of HCII for thrombin is conferred by a highly acidic hirudin-like N-terminal tail, which becomes available after GAG binding for interaction with the anion-binding exosite I of thrombin. This subgroup corresponds to clade D of the serpin superfamily.
Probab=100.00 E-value=1.3e-71 Score=542.38 Aligned_cols=346 Identities=27% Similarity=0.394 Sum_probs=301.4
Q ss_pred hhHHhhhhhhhHHHHHHHHhcCC----CC-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCCh---------hhHH-H
Q 036497 3 DVLESISEQTDITLSLSKHIKAP----TS-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSN---------EQQN-F 67 (375)
Q Consensus 3 ~~~~~~~~~~~f~~~l~~~~~~~----~~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~---------~~~~-~ 67 (375)
.+..+..++++||++||+++... .+ ++||+||+.+|+||++||+|+|++||.++||+++. .+++ .
T Consensus 61 ~~~~~~~~~~~Fa~~L~~~l~~~~~~~~Niv~SP~SI~~aLaml~~GA~G~T~~ql~~~Lg~~~~~~~~~~~~~~~~~~~ 140 (436)
T cd02047 61 RIQRLNILNANFGFNLYRVLKDQVNTSDNILLAPVGISTAMGMISLGLKGQTQEQVLSTLGFKDFVNASSKYEITTVHNL 140 (436)
T ss_pred hhhHHHHHHhHHHHHHHHHHhhccCCCCcEEEChHHHHHHHHHHHhhcccHHHHHHHHHhcccccccccccccHHHHHHH
Confidence 35567778999999999999752 23 99999999999999999999999999999999631 2355 7
Q ss_pred HHHHHHHHHhCCCCCCCCeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccc
Q 036497 68 ASELVAIVFADGSANGGPRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKE 147 (375)
Q Consensus 68 ~~~l~~~l~~~~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~ 147 (375)
++.+.+.+.. ...+..+.++|++|+++++.++++|++.++++|+++++.+||.+ + .++..||+||+++|+|+|++
T Consensus 141 ~~~l~~~l~~---~~~~~~L~~an~l~v~~~~~l~~~F~~~~~~~y~a~v~~vdF~~-~-~~~~~IN~wV~~~T~g~I~~ 215 (436)
T cd02047 141 FRKLTHRLFR---RNFGYTLRSVNDLYIKKDFPILLDFKNNVKTYYFAEAQIADFSD-P-AFITKTNNRIQKLTKGLIKE 215 (436)
T ss_pred HHHHHHHhhc---CCCCcEEeeeeehhhhCCCCccHHHHHHHHHHhcCceEEeCCCC-H-HHHHHHHHHHHHhcCCcccc
Confidence 7777766642 23456899999999999999999999999999999999999987 4 45678999999999999999
Q ss_pred cCCCCCCCccCeeEEEEeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeeecC--CeEEEEecccC---
Q 036497 148 VLPPGSVDDSSKLVFANALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTAFD--GFKVLVLPYKQ--- 222 (375)
Q Consensus 148 ~l~~~~~~~~t~lvlvna~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~--~~~vveLPy~~--- 222 (375)
++. +++++|+++|+||+||+|.|+.+|++..|..++|+..+|+.++||||++.+.++|++.+ ++++++|||++
T Consensus 216 ~l~--~i~~~t~lvLvNaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~V~MM~~~~~~~y~~~~~l~~~vleLPy~~~~S 293 (436)
T cd02047 216 ALE--NVDPATLMMILNCIYFKGTWENKFPVEMTHNRNFRLNEKEVVKVPMMQTKGNFLAAADPELDCDILQLPYVGNIS 293 (436)
T ss_pred ccc--cCCcccceeeeeeeEEechhhCcCCcccccCcCCEeCCCCEEEEehhcccceEEEEEcCCcCcEEEEecCCCCee
Confidence 995 68899999999999999999999999999999999999999999999988877776654 68999999986
Q ss_pred ---------CChHHHHHHccCcHHHHhccCCccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCCC
Q 036497 223 ---------DELPALEKKTGSQSGFLKDHIPYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDSH 293 (375)
Q Consensus 223 ---------~~l~~l~~~L~~~~~~l~~~~~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~ 293 (375)
.+|.+++++|+. ..+..+......+.++|.||||++++++||+++|++||++++|+. .|||++|++++
T Consensus 294 M~iiLP~~~~gL~~l~~~L~~--~~l~~~~~~~~~~~v~v~LPKFkie~~~dL~~~L~~lGi~~lF~~-~adfs~is~~~ 370 (436)
T cd02047 294 MLIVVPHKLSGMKTLEKQITP--QVVERWQKSMTNRTREVVLPKFKLEKNYNLIESLKLMGITDLFTE-KGNMAGVSDEK 370 (436)
T ss_pred EEEEeCcccCCHHHHHHHhCH--HHHHHHHHhCceeEEEEEeccEEEEeeecHHHHHHhcChhhhcCC-cccccccCCCC
Confidence 579999999963 445555555555567899999999999999999999999999997 89999999888
Q ss_pred -CccceeeeeEEEEcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEeCCcc
Q 036497 294 -VGVGIFQKSFIEVKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMFSILS 362 (375)
Q Consensus 294 -~vs~~~qk~~iev~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~p~ 362 (375)
+|++++|++.|+|||+|++|+|+|.+....++ .+..|++||||+|+|+|+.|+.|||+|+|.+|+
T Consensus 371 l~vs~v~hka~IeVdE~GteAaa~T~~~~~~~~----~~~~f~~drPFlf~I~d~~t~~iLF~G~v~~P~ 436 (436)
T cd02047 371 IAIDLFKHQGTITVNEEGTEAAAVTTVGFMPLS----TQVRFIVDRPFLFLIYEHRTNCLLFMGRVANPS 436 (436)
T ss_pred eEEEeeeeeeEEEEcCCcccchhccccccccCC----CCcEEEeeCCEEEEEEECCCCcEEEEEEecCCC
Confidence 99999999999999999999999974333222 235799999999999999999999999999995
No 13
>cd02049 bacterial_SERPIN SERine Proteinase INhibitors (serpins), prokaryotic subgroup. Little information about specific functions is available for this subgroup, most likely they are inhibitory members of the serpin superfamily. In general, serpins exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors.
Probab=100.00 E-value=7.3e-72 Score=536.80 Aligned_cols=342 Identities=32% Similarity=0.516 Sum_probs=302.4
Q ss_pred hhhhhhHHHHHHHHhcCCC---C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCCh--hhHH-HHHHHHHHHHhCCC
Q 036497 8 ISEQTDITLSLSKHIKAPT---S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSN--EQQN-FASELVAIVFADGS 80 (375)
Q Consensus 8 ~~~~~~f~~~l~~~~~~~~---~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~--~~~~-~~~~l~~~l~~~~~ 80 (375)
..++++||++||+++.... + ++||+||+.+|+||+.||+|+|++||.++||++.. .+++ .++.+...+..
T Consensus 2 ~~~~~~F~~~l~~~~~~~~~~~N~v~SP~si~~~L~~l~~Ga~g~T~~ql~~~L~~~~~~~~~~~~~~~~l~~~l~~--- 78 (364)
T cd02049 2 NDANTRFGFKLFSELNKEDVEKNIFISPLSIALALSMTYNGADGTTRKEMLKALGLDNIDLEDLNSALATLMDQLNT--- 78 (364)
T ss_pred cchhhHHHHHHHHHHhhcCCCCCEEECHHHHHHHHHHHhhhcCchHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHhc---
Confidence 3578999999999997652 3 99999999999999999999999999999999863 3566 78888776642
Q ss_pred CCCCCeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCCCccCee
Q 036497 81 ANGGPRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSVDDSSKL 160 (375)
Q Consensus 81 ~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~~~~t~l 160 (375)
...+..+.++|++|++++++++++|++.++++|+++++.+||.+ + .+++.||+|++++|+|+|++++.+ ++++|++
T Consensus 79 ~~~~~~l~~an~i~~~~~~~~~~~f~~~~~~~~~~~v~~~dF~~-~-~a~~~IN~wv~~~T~g~I~~~~~~--i~~~t~l 154 (364)
T cd02049 79 HDKTVELIIANSIWIEPGFTLKPDFLQTIKDYYQAYVLELDFQS-P-AAAEEINRWVKEKTKGKIDKIVDK--IDPDDVM 154 (364)
T ss_pred CCCCcEEEeehhhHhhCCCCccHHHHHHHHHhhcccceeeCCCC-H-HHHHHHHHHHHHhhcChHHHhcCC--CCCCceE
Confidence 23457899999999999999999999999999999999999987 4 589999999999999999999963 9999999
Q ss_pred EEEEeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeeecCCeEEEEecccC-------------CChHH
Q 036497 161 VFANALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTAFDGFKVLVLPYKQ-------------DELPA 227 (375)
Q Consensus 161 vlvna~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~~~~vveLPy~~-------------~~l~~ 227 (375)
+++||+||+|.|+.||++..|.+++|++.+|+.+.||||++.+.+.|.+.+++++++|||++ .+|.+
T Consensus 155 vlvna~~fk~~W~~~F~~~~T~~~~F~~~~~~~~~v~mM~~~~~~~y~~~~~~~~l~Lpy~~~~~sm~iiLP~~~~~l~~ 234 (364)
T cd02049 155 FLINAVYFKGDWQEPFDKQSTYEAPFYLPDGSTKEVPFMSRTGNFRYLETPGFQAVRLPYGDGRLSMYVFLPKENVSLRE 234 (364)
T ss_pred EEEeeEEEeeeecCCCChhhcccCcCCCCCCCEEECcccCCcCcEeeEEcCCCeEEEeecCCCcEEEEEEecCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999988899999999986 56999
Q ss_pred HHHHccCcHHHHhccCCccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCCC-CccceeeeeEEEE
Q 036497 228 LEKKTGSQSGFLKDHIPYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDSH-VGVGIFQKSFIEV 306 (375)
Q Consensus 228 l~~~L~~~~~~l~~~~~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~-~vs~~~qk~~iev 306 (375)
++++|+. ..+..+....+...++|.||||++++++||+++|++||++++|++..|||+++++++ +|++++|++.|+|
T Consensus 235 l~~~l~~--~~~~~~~~~~~~~~v~v~lPkF~i~~~~~L~~~L~~mGi~~~F~~~~a~~s~~~~~~l~vs~v~hka~iev 312 (364)
T cd02049 235 FVKTLTA--EKWRKWIEQFRMREGSLSLPRFQLEYEIELRDALKALGMEEAFTPDAADFSKLGEGNLYISKVIHKTFIEV 312 (364)
T ss_pred HHHHhCH--HHHHHHHHhCceeEEEEEeeeEEccceechHHHHHHCcccccCCCCcCCCCCCCCCCeEEEeeeeeEEEEE
Confidence 9999973 344555555555667999999999999999999999999999998789999998877 9999999999999
Q ss_pred cCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEe
Q 036497 307 KEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMF 358 (375)
Q Consensus 307 ~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v 358 (375)
||+|++|+|+|......++.+.+++++|++||||+|+|+|+.|+.|||+|||
T Consensus 313 ~E~G~~a~a~t~~~~~~~~~~~~~~~~f~~nrPF~f~I~d~~t~~iLF~G~v 364 (364)
T cd02049 313 NEEGTEAAAATSVEITETSAPAGEPFTMVADRPFLFAIRDNRTGSILFMGAV 364 (364)
T ss_pred ccCceeecccceeeeeeccCCCCCCceEEeeCCEEEEEEECCCCcEEEEEeC
Confidence 9999999999985433333321345789999999999999999999999996
No 14
>cd02056 alpha-1-antitrypsin_like alpha-1-antitrypsin_like. This family contains a variety of different members of clade A of the serpin superfamily. They include the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and noninhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia.
Probab=100.00 E-value=9.7e-72 Score=535.55 Aligned_cols=337 Identities=26% Similarity=0.419 Sum_probs=296.9
Q ss_pred hhhhHHHHHHHHhcCCC---C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCCh----hhHH-HHHHHHHHHHhCCC
Q 036497 10 EQTDITLSLSKHIKAPT---S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSN----EQQN-FASELVAIVFADGS 80 (375)
Q Consensus 10 ~~~~f~~~l~~~~~~~~---~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~----~~~~-~~~~l~~~l~~~~~ 80 (375)
|+++||++||+++.... + ++||+||+.+|+||+.||+|+|++||.++||++.. ++++ .++.+...+..
T Consensus 1 ~~~~F~~~l~~~~~~~~~~~N~v~SP~si~~~L~ml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~~l~~--- 77 (361)
T cd02056 1 ANADFAFRLYRQLASESPSKNIFFSPVSISTALAMLSLGARSSTLAQILEGLGFNLTEISEEEIHQGFQHLLHLLNQ--- 77 (361)
T ss_pred CccHHHHHHHHHHhhcCCCCcEEEChHHHHHHHHHHHCccchhHHHHHHHHhcCCccCCCHHHHHHHHHHHHHHHcC---
Confidence 46899999999997542 3 99999999999999999999999999999999753 3556 78888776642
Q ss_pred CCCCCeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCCCccCee
Q 036497 81 ANGGPRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSVDDSSKL 160 (375)
Q Consensus 81 ~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~~~~t~l 160 (375)
...+..+.++|+||++++++++++|++.++++|+++++.+||.+ +..+++.||+|++++|+|+|+++++ +++++|++
T Consensus 78 ~~~~~~l~~an~l~~~~~~~~~~~f~~~~~~~y~~~~~~~dF~~-~~~~~~~IN~wv~~~T~g~I~~~~~--~i~~~t~l 154 (361)
T cd02056 78 PDSGLQLNMGNALFLDKRLKPLDKFLEDVKHLYESEAFSTDFQD-SAEAKKQINDYVEKKTHGKIVDLVK--DLDSDTVM 154 (361)
T ss_pred CCCcceEEeeeehhhhCCCChhHHHHHHHHHHhcCceEeeCCCC-hHHHHHHHHHHHHHHhhhhHHhhcC--CCCCCceE
Confidence 23456899999999999999999999999999999999999986 5789999999999999999999996 68999999
Q ss_pred EEEEeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeeecC--CeEEEEecccC-----------CChHH
Q 036497 161 VFANALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTAFD--GFKVLVLPYKQ-----------DELPA 227 (375)
Q Consensus 161 vlvna~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~--~~~vveLPy~~-----------~~l~~ 227 (375)
+++||+||+|.|+.+|++..|..++|+..+|+.+.||||++.+.+.|++.+ ++++|+|||++ .+|.+
T Consensus 155 vlvna~~Fk~~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~y~~~~~l~~~~veLPy~~~~sm~iiLP~~~~l~~ 234 (361)
T cd02056 155 VLVNYIYFKGKWEKPFDPELTQEEDFFVDEKTTVKVPMMHQTGRYDYLHDSELSCTVVQMPYKGNATAFFVLPDEGKMKQ 234 (361)
T ss_pred EEEEEEeeeehccCCCCcccCcccCCEeCCCcEEEeecccccCcEeeEEcCCCCcEEEEEecCCCcEEEEEecCcchHHH
Confidence 999999999999999999999999999999999999999999988887766 89999999987 35888
Q ss_pred HHHHccCcHHHHhccCCccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCCC--CccceeeeeEEE
Q 036497 228 LEKKTGSQSGFLKDHIPYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDSH--VGVGIFQKSFIE 305 (375)
Q Consensus 228 l~~~L~~~~~~l~~~~~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~--~vs~~~qk~~ie 305 (375)
+++.|+. ..+..+....+...++|.||||++++++||+++|++||++++|++ .|||++|++++ +|++++|++.|+
T Consensus 235 l~~~l~~--~~l~~~~~~~~~~~v~v~lPkF~i~~~~~l~~~L~~~Gi~~~F~~-~adfs~i~~~~~l~vs~v~qk~~ie 311 (361)
T cd02056 235 VEAALSR--DTLKKWSKLLSKRSVDLYLPKFSISGTYNLKDILPKMGITDVFSD-KADLSGITEQPNLKVSKAVHKAVLD 311 (361)
T ss_pred HHHhhCH--HHHHHHHHhCceeEEEEEeeeEEEeeeechHHHHHhcChhhhcCC-cCCccccCCCCCEEEEeeeeeeEEE
Confidence 8888863 345555555555667999999999999999999999999999986 89999999754 999999999999
Q ss_pred EcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEe
Q 036497 306 VKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMF 358 (375)
Q Consensus 306 v~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v 358 (375)
|||+||+|+|+|......++. .+.+|+|||||+|+|+|+.|+.|||+|+|
T Consensus 312 v~E~Gt~aaa~t~~~~~~~~~---~~~~f~~drPF~f~I~~~~t~~iLF~G~v 361 (361)
T cd02056 312 VDEKGTEAAAATGVEITPMSA---LPPILKFNRPFLLLIFDRTTESILFLGKV 361 (361)
T ss_pred EcCCCcccccccchhhhcccC---CCCEEEEeCCEEEEEEECCCCcEEEEEeC
Confidence 999999999999854443332 24589999999999999999999999997
No 15
>smart00093 SERPIN SERine Proteinase INhibitors.
Probab=100.00 E-value=1.7e-71 Score=533.74 Aligned_cols=334 Identities=33% Similarity=0.520 Sum_probs=292.4
Q ss_pred HHHHHHhcCCC---C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCCh----hhHH-HHHHHHHHHHhCCCCCCCCe
Q 036497 16 LSLSKHIKAPT---S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSN----EQQN-FASELVAIVFADGSANGGPR 86 (375)
Q Consensus 16 ~~l~~~~~~~~---~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~----~~~~-~~~~l~~~l~~~~~~~~~~~ 86 (375)
++||+++...+ + ++||+||+.+|+||+.||+|+|++||.++||++.. ++++ .++.+.+.+.. ...+..
T Consensus 1 ~~l~~~l~~~~~~~N~v~SP~si~~~L~ml~~GA~g~T~~el~~~L~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~ 77 (359)
T smart00093 1 FDLYKELAKESPDKNIFFSPVSISSALAMLSLGAKGSTATQILEVLGFNLTELSEADIHQGFQHLLQLLNR---PDSQLE 77 (359)
T ss_pred ChHHHHHhccCCCCeEEEChHHHHHHHHHHHcccCchHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhC---CCCcce
Confidence 36899987643 2 99999999999999999999999999999999854 2555 78888776642 234568
Q ss_pred EEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCCCccCeeEEEEeE
Q 036497 87 LSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSVDDSSKLVFANAL 166 (375)
Q Consensus 87 l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~~~~t~lvlvna~ 166 (375)
+.++|++|++++++++++|++.++++|+++++.+||.+.++.+++.||+||+++|+|+|+++++ +++++|+++|+||+
T Consensus 78 l~~an~i~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~a~~~IN~wv~~~T~g~I~~~~~--~i~~~t~lvlvnai 155 (359)
T smart00093 78 LKTANALFVDKSLKLKDSFLEDIKKLYGAEVQSVDFSDKAEEAKKQINDWVEKKTQGKIKDLLS--DLDSDTRLVLVNAI 155 (359)
T ss_pred EEeeeeehccCCCchhHHHHHHHHHHhcCeeEEecCCCCHHHHHHHHHHHHHHhhhchHHHhcc--cCCCCceEEEEeeE
Confidence 9999999999999999999999999999999999999865679999999999999999999996 48899999999999
Q ss_pred EeeccccccccCCCCeeeeeecCCCcEEeecceecccc-ceeeec--CCeEEEEecccC-----------CChHHHHHHc
Q 036497 167 YFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNK-QLVTAF--DGFKVLVLPYKQ-----------DELPALEKKT 232 (375)
Q Consensus 167 ~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~-~~~~~~--~~~~vveLPy~~-----------~~l~~l~~~L 232 (375)
||+|.|+.||++..|..++|+..+|+.+.||||++.+. +.|++. .++++|+|||++ .+|.+++++|
T Consensus 156 yFkg~W~~~F~~~~T~~~~F~~~~g~~~~V~mM~~~~~~~~y~~~~~~~~~vv~Lpy~~~~sm~iilP~~~~l~~l~~~l 235 (359)
T smart00093 156 YFKGKWKTPFDPELTREEDFHVDETTTVKVPMMSQTGRTFNYGHDEELNCQVLELPYKGNASMLIILPDEGGLEKLEKAL 235 (359)
T ss_pred EEeeECCCCCCcccceecccEeCCCeEEEEeceeccCceeEEEEcCCCCcEEEEEecCCCeeEEEEccCccHHHHHHHhh
Confidence 99999999999999999999999999999999999987 877754 479999999987 4588888888
Q ss_pred cCcHHHHhccCCccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCC-C-CccceeeeeEEEEcCCc
Q 036497 233 GSQSGFLKDHIPYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDS-H-VGVGIFQKSFIEVKEEG 310 (375)
Q Consensus 233 ~~~~~~l~~~~~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~-~-~vs~~~qk~~iev~E~G 310 (375)
+. ..+..+....+...++|.||||++++++||+++|++||++++|+. .|||++|+++ + +|++++|++.|+|||+|
T Consensus 236 ~~--~~l~~~~~~~~~~~v~l~lPkf~i~~~~~l~~~L~~lGl~~~F~~-~adfs~i~~~~~l~vs~v~hka~ieVdE~G 312 (359)
T smart00093 236 TP--ETLKKWMKSLTKRSVELYLPKFKIEGTYDLKDVLEKLGITDLFSN-KADLSGISEDKDLKVSKVLHKAVLEVNEEG 312 (359)
T ss_pred CH--HHHHHHHHhccceEEEEEccEEEEEEEecHHHHHHHcCcchhccC-ccCcccccCCCCeEEEeeeeEEEEEEcCCC
Confidence 63 344444444455567899999999999999999999999999995 8999999975 4 99999999999999999
Q ss_pred ccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEeCCc
Q 036497 311 TEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMFSIL 361 (375)
Q Consensus 311 ~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~p 361 (375)
++|+|+|......++. +.+|++||||+|+|+|+.||.|||+|+|.+|
T Consensus 313 t~aaa~t~~~~~~~~~----~~~f~~drPF~f~I~~~~t~~iLF~G~v~~P 359 (359)
T smart00093 313 TEAAAATGVIAVPRSL----PPEFKANRPFLFLIRDNKTGSILFMGKVVNP 359 (359)
T ss_pred ccccccccccccccCC----CceEEecCCEEEEEEECCCCeEEEEEecCCC
Confidence 9999999854333332 2689999999999999999999999999988
No 16
>cd00172 SERPIN SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia.
Probab=100.00 E-value=1.9e-71 Score=534.65 Aligned_cols=340 Identities=34% Similarity=0.538 Sum_probs=302.2
Q ss_pred hhhhHHHHHHHHhcCCC---C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCC--hhhHH-HHHHHHHHHHhCCCCC
Q 036497 10 EQTDITLSLSKHIKAPT---S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKS--NEQQN-FASELVAIVFADGSAN 82 (375)
Q Consensus 10 ~~~~f~~~l~~~~~~~~---~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~--~~~~~-~~~~l~~~l~~~~~~~ 82 (375)
++++||++||+++...+ + ++||+||+.+|+||+.||+|+|++||.++||++. ..+++ .++.+.+.+.. ..
T Consensus 1 ~~~~Fa~~l~~~~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~el~~~L~~~~~~~~~~~~~~~~~~~~l~~---~~ 77 (364)
T cd00172 1 ANNDFALDLYKQLAKSEPDENVVFSPLSIASALALLYLGAGGETREQLRKVLGLPSLDDEDVHQAFKSLLSSLKD---SE 77 (364)
T ss_pred CcchHHHHHHHHHhhcCCCCCEEEcHHHHHHHHHHHhhhcCchHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHhC---CC
Confidence 36889999999998752 3 9999999999999999999999999999999984 45666 88888877753 23
Q ss_pred CCCeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCCCccCeeEE
Q 036497 83 GGPRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSVDDSSKLVF 162 (375)
Q Consensus 83 ~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~~~~t~lvl 162 (375)
+...+.++|++|+++++.++++|++.++++|+++++.+||.+ ++.+++.||+||+++|+|+|++++++++++++|+++|
T Consensus 78 ~~~~l~~an~~~~~~~~~~~~~f~~~~~~~~~~~~~~~dF~~-~~~a~~~IN~wv~~~T~g~I~~~~~~~~i~~~t~l~l 156 (364)
T cd00172 78 KGVELKLANRLFVQKGLTVKEDFLDLAKKYYDAEVESVDFAN-PEAAAAQINNWVEEKTNGKIKDLLSPDALDPDTRLVL 156 (364)
T ss_pred CCceeeeehhhhhhCCCchhHHHHHHHHHHhcCeeEEEcCCC-hHHHHHHHHHHHHhhhcccchhhCCCCCCCcccceee
Confidence 456899999999999999999999999999999999999998 4789999999999999999999999888999999999
Q ss_pred EEeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeeecC--CeEEEEecccC-------------CChHH
Q 036497 163 ANALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTAFD--GFKVLVLPYKQ-------------DELPA 227 (375)
Q Consensus 163 vna~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~--~~~vveLPy~~-------------~~l~~ 227 (375)
+||+||+|.|++||++..|..++|+..+|+.+.||||++.+.++|++.+ ++++|+|||++ .+|.+
T Consensus 157 vnai~Fkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~y~~~~~l~~~vv~lpy~~~~~sm~iilP~~~~~l~~ 236 (364)
T cd00172 157 VNAIYFKGKWKTPFDPELTRKRPFYVSEGESVQVPMMYQTGKFRYAEDEELDAQVLELPYKGSDLSMLIILPKEVTGLAE 236 (364)
T ss_pred eeheeeeeccCCCCChhhceecccEeCCCcEEEEeCccccCcEEEEEcCccCcEEEEeecCCCceEEEEEecCCCCcHHH
Confidence 9999999999999999999999999999999999999999988888877 99999999987 47999
Q ss_pred HHHHccCcHHHHhccCCccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCCC--CccceeeeeEEE
Q 036497 228 LEKKTGSQSGFLKDHIPYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDSH--VGVGIFQKSFIE 305 (375)
Q Consensus 228 l~~~L~~~~~~l~~~~~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~--~vs~~~qk~~ie 305 (375)
++++|+. ..++.+....+...++|.||||++++++||+++|++||++++|++ .|+|++++.++ +|++++|++.|+
T Consensus 237 l~~~l~~--~~l~~~~~~~~~~~v~l~lPkF~i~~~~~l~~~L~~~Gl~~~F~~-~a~~~~~~~~~~l~v~~v~hk~~ie 313 (364)
T cd00172 237 LEEKLSA--EKLDDLLSNLKEREVEVTLPKFKIESSLDLKEVLQALGITDLFSP-SADLSSISSDEPLYVSKVIHKAFIE 313 (364)
T ss_pred HHHhcCH--HHHHHHHHhCCeEEEEEEeeEEEEeeeeCcHHHHHHcCCccccCC-ccccccCCCCCCeEEEeeeeeeEEE
Confidence 9999963 445555555555667999999999999999999999999999998 89999987655 999999999999
Q ss_pred EcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEe
Q 036497 306 VKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMF 358 (375)
Q Consensus 306 v~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v 358 (375)
|||+|++|+|+|......+ ..+.+..|++||||+|+|+|+.|+.|||+|+|
T Consensus 314 vdE~Gt~aaa~t~~~~~~~--~~~~~~~f~~drPF~f~I~~~~t~~iLF~G~v 364 (364)
T cd00172 314 VNEEGTEAAAATAVSIVPR--RPSPPVEFKADRPFLFLIRDDTTGTILFLGRV 364 (364)
T ss_pred ECCCceehhcccceeeccc--cCCCCCEEEEECCEEEEEEECCCCeEEEEEEC
Confidence 9999999999998533222 12335689999999999999999999999996
No 17
>cd02046 hsp47 Heat shock protein 47 (Hsp47), also called colligin, because of its collagen binding ability, is a chaperone specific for procollagen. It has been shown to be essential for collagen biosynthesis, but its exact function is still unclear. Hsp47 is a non-inhibitory member of the SERPIN superfamily and corresponds to clade H.
Probab=100.00 E-value=2.1e-71 Score=532.22 Aligned_cols=340 Identities=21% Similarity=0.333 Sum_probs=294.5
Q ss_pred hhhhhhhHHHHHHHHhcCCC---C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCCh--hhHH-HHHHHHHHHHhCC
Q 036497 7 SISEQTDITLSLSKHIKAPT---S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSN--EQQN-FASELVAIVFADG 79 (375)
Q Consensus 7 ~~~~~~~f~~~l~~~~~~~~---~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~--~~~~-~~~~l~~~l~~~~ 79 (375)
+..++++||++||+++...+ + ++||+||+.+|+||+.||+|+|++||.++|+++.. .+++ .++++...+..
T Consensus 3 ~~~~~~~f~~~l~~~~~~~~~~~N~v~SP~si~~aLa~l~~Ga~g~T~~ql~~~L~~~~~~~~~~~~~~~~l~~~l~~-- 80 (366)
T cd02046 3 LADRSAGLAFNLYHAMAKDKGVENILLSPVVVASSLGLVSMGGKASTASQAKAVLSADKLKDEHVHTGLSELLNEVSN-- 80 (366)
T ss_pred hhhhhhHHHHHHHHHhhccCCCCeEEEChHHHHHHHHHHHhhcCccHHHHHHHHhCCCCCCcHHHHHHHHHHHHHhhc--
Confidence 34578899999999998643 2 99999999999999999999999999999998643 3566 77777766532
Q ss_pred CCCCCCeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCCCccCe
Q 036497 80 SANGGPRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSVDDSSK 159 (375)
Q Consensus 80 ~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~~~~t~ 159 (375)
....+..+.++|++|+++++.++++|++.++++|+++++.+||.+ ++.+++.||+||+++|+|+|+++++ +++++|+
T Consensus 81 ~~~~~~~l~~an~~~~~~~~~l~~~F~~~~~~~y~~~~~~vdF~~-~~~a~~~IN~wv~~~T~g~I~~~~~--~i~~~t~ 157 (366)
T cd02046 81 STARNVTWKIGNRLYGPSSVSFADDFVKNSKKHYNYEHSKINFRD-KRSALNSINEWAAQTTDGKLPEVTK--DVEKTDG 157 (366)
T ss_pred CCCCCcEEEEeeehhhcCCCChhHHHHHHHHHHhcCeeEEecCCC-hHHHHHHHHHHHHHhcCCchhHhhc--cCCcchH
Confidence 122456899999999999999999999999999999999999987 5789999999999999999999984 6889999
Q ss_pred eEEEEeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeeec--CCeEEEEecccC-------------CC
Q 036497 160 LVFANALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTAF--DGFKVLVLPYKQ-------------DE 224 (375)
Q Consensus 160 lvlvna~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~~--~~~~vveLPy~~-------------~~ 224 (375)
++|+||+||+|.|+.||++..|..++||+.+|+.++||||++.+.+.|+.. .++++|+|||++ .+
T Consensus 158 l~lvnaiyFkg~W~~~F~~~~T~~~~F~~~~~~~v~V~mM~~~~~~~y~~~~~~~~~vl~LPy~~~~~sm~iiLP~~~~~ 237 (366)
T cd02046 158 ALIVNAMFFKPHWDEKFHHKMVDNRGFMVTRSYTVSVPMMHRTGLYGYYDDEENKLQIVEMPLAHKLSSMIFIMPYHVEP 237 (366)
T ss_pred hhhhheEEEcchhcCCCCHHhceeccEEeCCCeEEEhhHhhccCceeeEEeCCCCeEEEEEEcCCCcEEEEEEecCCCCC
Confidence 999999999999999999999999999999999999999999887777654 589999999986 57
Q ss_pred hHHHHHHccCcHHHHhccCCccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCC-C-Cccceeeee
Q 036497 225 LPALEKKTGSQSGFLKDHIPYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDS-H-VGVGIFQKS 302 (375)
Q Consensus 225 l~~l~~~L~~~~~~l~~~~~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~-~-~vs~~~qk~ 302 (375)
|.++++.|+. ..+..+....+...++|.||||++++++||+++|++||++++|++..|||++|+++ + +|++++||+
T Consensus 238 L~~l~~~L~~--~~l~~~~~~~~~~~v~l~lPKF~i~~~~dL~~~L~~lGi~~~F~~~~Adfs~i~~~~~l~vs~v~hka 315 (366)
T cd02046 238 LERLEKLLTR--EQLKTWISKMKKRAVAISLPKVSLEVSHDLQKHLGDLGLTEAIDKSKADLSKISGKKDLYLSNVFHAA 315 (366)
T ss_pred HHHHHHHhCH--HHHHHHHHhcceeEEEEEcceEEeeEEEcHHHHHHHcCCccccCCCCCCcccCCCCCceeeeeeEEEE
Confidence 9999999963 34444555555566799999999999999999999999999999768999999976 4 999999999
Q ss_pred EEEEcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEe
Q 036497 303 FIEVKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMF 358 (375)
Q Consensus 303 ~iev~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v 358 (375)
.|||||+|++|++++.. .+. .+.+..|+|||||+|+|+|+.||.|||+|||
T Consensus 316 ~ieV~E~G~~aaa~~~~----~~~-~~~~~~f~~nrPF~f~I~~~~t~~iLF~G~v 366 (366)
T cd02046 316 ALEWDTEGNPFDPDIYG----REE-MRNPKLFYADHPFIFLVKDNKTNSILFIGRL 366 (366)
T ss_pred EEEECCCcchhhhhhhh----ccc-CCCCCEEEecCCEEEEEEECCCCcEEEEEeC
Confidence 99999999999876431 111 1224579999999999999999999999996
No 18
>cd02052 PEDF Pigment epithelium-derived factor (PEDF)_like. PEDF is non-inhibitory member of the Serpin superfamily. It exhibits neurotrophic, neuroprotective and antiangiogenic properties and is widely expressed in the developing and adult nervous systems. This subgroup corresponds to clade F1 of the serpin superfamily.
Probab=100.00 E-value=1.5e-71 Score=534.78 Aligned_cols=341 Identities=22% Similarity=0.313 Sum_probs=297.8
Q ss_pred chhHHhhhhhhhHHHHHHHHhcCCC---C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCCh--hhHH-HHHHHHHH
Q 036497 2 DDVLESISEQTDITLSLSKHIKAPT---S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSN--EQQN-FASELVAI 74 (375)
Q Consensus 2 ~~~~~~~~~~~~f~~~l~~~~~~~~---~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~--~~~~-~~~~l~~~ 74 (375)
|+...+..+.++||++||+++.... + ++||+||+.+|+||+.||+|+|++||+++||++.. .+++ .++.+.+.
T Consensus 10 ~~~~~l~~~~~~Fa~~l~~~l~~~~~~~Nvv~SP~si~~~L~ml~~GA~g~T~~ql~~~L~~~~~~~~~~~~~~~~l~~~ 89 (374)
T cd02052 10 TPRNKLAAAVSNFGYDLYRQQASRDPTANVFLSPLSIATALSQLSLGAGERTESQIHRALYYDLLNDPELHDTYKDLLAS 89 (374)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhccCCCCcEEEChHHHHHHHHHHHhccChHHHHHHHHHhCCCCCChHHHHHHHHHHHHH
Confidence 4667788899999999999997643 3 99999999999999999999999999999998642 4566 88888877
Q ss_pred HHhCCCCCCCCeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCC
Q 036497 75 VFADGSANGGPRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSV 154 (375)
Q Consensus 75 l~~~~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~ 154 (375)
+.. ....+.++|++|++++++++++|++.++++|+++++.+||.. .+++.||+|++++|+|+|+++++ ++
T Consensus 90 l~~-----~~~~l~~an~i~v~~~~~l~~~f~~~~~~~~~~~~~~~~~~~---~~~~~IN~wv~~~T~g~I~~~l~--~i 159 (374)
T cd02052 90 LTA-----PAKGLKSASRILLERKLRLRLEFVNQVEKSYGERPRILAGNA---LDLQEINDWVQQQTGGKVDRFVK--EI 159 (374)
T ss_pred hcC-----CCccchhhhHHHHhCCCchhHHHHHHHHHHhhCccccccCCH---HHHHHHHHHHHHhhcCcHHHhCC--CC
Confidence 642 223589999999999999999999999999999999999843 68899999999999999999996 48
Q ss_pred CccCeeEEEEeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccc-cceeeec--CCeEEEEecccC---------
Q 036497 155 DDSSKLVFANALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKN-KQLVTAF--DGFKVLVLPYKQ--------- 222 (375)
Q Consensus 155 ~~~t~lvlvna~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~-~~~~~~~--~~~~vveLPy~~--------- 222 (375)
+++|+++|+||+||+|.|+.+|++..|..++||..+|++++||||++.+ .++|++. .++++|+|||++
T Consensus 160 ~~~t~l~lvNa~yFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~y~~~~~~~~~vveLPy~~~~sm~iiLP 239 (374)
T cd02052 160 PRNVSILLLGSAYFKGQWITKFDKRNTVLTDFHLDEQRTVVVPMMSDPNAPVRYGLDSDLNCKIAQLPLTGGVSIMFFLP 239 (374)
T ss_pred CCccceEEEeeEEEechhcCCCCcccCccccEEcCCCcEEEEEeeccCCcceeeEEcCCCCcEEEEEecCCCeEEEEEec
Confidence 8999999999999999999999999999999999999999999999854 6666654 478999999987
Q ss_pred ---C-ChHHHHHHccCcHHHHhccCCccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCCC-Cccc
Q 036497 223 ---D-ELPALEKKTGSQSGFLKDHIPYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDSH-VGVG 297 (375)
Q Consensus 223 ---~-~l~~l~~~L~~~~~~l~~~~~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~-~vs~ 297 (375)
. +|..+++.|+. ..++.+....+...++|.||||++++++||+++|++||++++|+. |||++|++++ +|++
T Consensus 240 ~~~~~~L~~l~~~l~~--~~~~~~~~~~~~~~v~v~lPKF~i~~~~~l~~~L~~lGl~~~F~~--adfs~i~~~~l~v~~ 315 (374)
T cd02052 240 DKVTQNLTLIEESLTS--EFVHDIDRELKTVKAVLTLPKLKLSYETELLPSLQELKLQSLFAS--PDFTKITSKPIKLSH 315 (374)
T ss_pred CCCCCCHHHHHhhcCH--HHHHHHHHhCeEEEEEEECccEEEEEEechHHHHHhcCCcccccc--cchhhccccceEeEe
Confidence 2 58889988863 445555555555667999999999999999999999999999985 9999999877 9999
Q ss_pred eeeeeEEEEcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEeCCc
Q 036497 298 IFQKSFIEVKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMFSIL 361 (375)
Q Consensus 298 ~~qk~~iev~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~p 361 (375)
++|++.|||||+|++|+|+|..... ++ .+.+|+|||||+|+|+|+.||.|||+|+|.+|
T Consensus 316 v~hk~~ieVdE~Gt~aaa~t~~~~~-~~----~~~~f~~drPFlf~I~~~~t~~iLF~G~v~~P 374 (374)
T cd02052 316 VHHKAVLELNEDGAETAPTPGSATA-LT----FPLEYHVDRPFLFVLRDEDTGALLFIGKVLDP 374 (374)
T ss_pred eEEEEEEEECCCccccccccccccc-cC----CCeEEEeeCCEEEEEEECCCCcEEEEEEecCC
Confidence 9999999999999999999974321 22 14689999999999999999999999999998
No 19
>PF00079 Serpin: Serpin (serine protease inhibitor); InterPro: IPR023796 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively. In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. Serpins (SERine Proteinase INhibitors) [, , ] belong to MEROPS inhibitor family I4, clan ID. Serpins are proteins that are primarily known as irreversible serine protease inhibitors active against S1 (IPR001254 from INTERPRO), S8 (IPR000209 from INTERPRO) and C14 (IPR002398 from INTERPRO) peptidases. There are both extra- and intra-cellular serpins, which are found in all groups of organisms with the notable exception of fungi [, ]. In contrast to "rigid" proteinase inhibitors, such as those of the Kunitz or Kazal families, the serpins are metastable proteins (active-state proteins) which interact with their substrate and irreversibly trap the acyl intermediate as a result of a major conformational change []; they are best described as suicide substrate inhibitors. The common structure of these proteins is a multi-domain fold containing a bundle of 8 or 9 alpha helices and a beta sandwich formed by 3 beta sheets. The reactive centre loop (RCL) is found in the C-terminal part of these proteins. Serpins and their homologues are a group of high molecular weight (40 to 50 kDa) structurally related proteins involved in a number of fundamental biological processes such as blood coagulation, complement activation, fibrinolysis, angiogenesis, inflammation, tumour suppression and hormone transport. All known serpins have been classified into 16 clades and 10 orphan sequences; the vertebrate serpins can be conveniently classified into six sub-groups []. In human plasma they represent approximately 2% of the total protein, of which 70% is alpha-1-antitrypsin. On the basis of strong sequence similarities, a number of proteins with no known inhibitory activity also belong to this family, these include: angiotensinogen, corticosteroid-binding globulin and thyroxin-binding globulin []. This entry represents the structural domain of serpins. It consists of a cluster of helices and a beta-sandwich.; PDB: 3PZF_A 3B9F_I 1MTP_A 1SNG_A 1ANT_I 2ZNH_B 1BR8_I 1SR5_A 1E03_L 1AZX_L ....
Probab=100.00 E-value=2.1e-70 Score=529.02 Aligned_cols=346 Identities=33% Similarity=0.537 Sum_probs=307.4
Q ss_pred hhhhhHHHHHHHHhcCCC---C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCC--hhhHH-HHHHHHHHHHhCCCC
Q 036497 9 SEQTDITLSLSKHIKAPT---S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKS--NEQQN-FASELVAIVFADGSA 81 (375)
Q Consensus 9 ~~~~~f~~~l~~~~~~~~---~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~--~~~~~-~~~~l~~~l~~~~~~ 81 (375)
+++++||++||+++...+ + |+||+||+.+|+||+.||+|+|++||.++||++. .++++ .++.+...+.. .+
T Consensus 1 ~a~~~f~~~L~~~~~~~~~~~N~v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~~~~~~~~~~~l~~~l~~--~~ 78 (371)
T PF00079_consen 1 AANNQFALKLFKALSKSNPDENFVFSPLSIYSALAMLYLGASGETRKELRKVLGLPGSDDEEIHEYFKKLLQSLNS--SP 78 (371)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSSEEE-HHHHHHHHHHHHHTSCHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHHS--CS
T ss_pred ChHHHHHHHHHHHHHhhCCCCcEEEChHHHHHHHHHHHhhccCCHHHHHHHHhhhcccccccchhhhhhhhhhhhc--cc
Confidence 478999999999998755 2 9999999999999999999999999999999973 35666 88888887763 24
Q ss_pred CCCCeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCCCccCeeE
Q 036497 82 NGGPRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSVDDSSKLV 161 (375)
Q Consensus 82 ~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~~~~t~lv 161 (375)
.++..+.++|++|++++++++++|++.++++|+++++.+||.+. ..+++.||+|++++|+|+|++++++++++++|.++
T Consensus 79 ~~~~~~~~~~~l~~~~~~~~~~~f~~~~~~~~~~~~~~~df~~~-~~~~~~IN~wv~~~T~g~I~~~v~~~~i~~~t~~v 157 (371)
T PF00079_consen 79 SDNPQLKLANKLFVDKNLPLKPEFKKTLKKYFNAEVESVDFSDP-PQAAKEINKWVSEKTNGKIKNLVSPNDIDPDTRLV 157 (371)
T ss_dssp TSSSEEEEEEEEEEETTSEBEHHHHHHHHHHHSEEEEEEETTSH-HHHHHHHHHHHHHHTTTSSSTSSSTTSSSTTEEEE
T ss_pred cccccceeeeeeecccccccccccchhhhhcccccccccccccc-chhhhhhcchhhhhccceeeccccccchhhHHHHh
Confidence 56789999999999999999999999999999999999999984 56999999999999999999999988999999999
Q ss_pred EEEeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeeecC--CeEEEEecccC------------CChHH
Q 036497 162 FANALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTAFD--GFKVLVLPYKQ------------DELPA 227 (375)
Q Consensus 162 lvna~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~--~~~vveLPy~~------------~~l~~ 227 (375)
|+||+||+|.|+.||++..|..++|+..+|+.+.|+||++.+.+.|++.+ ++++|+|||++ .+|.+
T Consensus 158 lina~~f~~~W~~~F~~~~t~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~~l~~~~v~Lp~~~~~sm~iilP~~~~~l~~ 237 (371)
T PF00079_consen 158 LINAIYFKGKWKYPFDPENTEKRPFYVSDGKSVSVPMMHQSGRFRYAEDEDLDAQVVELPYKGNFSMLIILPDEGDGLDE 237 (371)
T ss_dssp EEEEEEEEEEBSSTEEGGGEEEEEEECSSSEEEEEEEEEEEEEEEEEEETTTTEEEEEEEBSTSEEEEEEEESSTTTHHH
T ss_pred hcccccccccccccccccccccccccccccccceEEEEecccccccccccccceeEEEeccccceeeEEEEeccccchhh
Confidence 99999999999999999999999999999999999999999988887766 99999999987 57999
Q ss_pred HHHHccCcHHHHhccCCccceeeee--eeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCCC--CccceeeeeE
Q 036497 228 LEKKTGSQSGFLKDHIPYEMIEVGD--FRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDSH--VGVGIFQKSF 303 (375)
Q Consensus 228 l~~~L~~~~~~l~~~~~~~~~~~~~--l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~--~vs~~~qk~~ 303 (375)
++++|+. ..+..++...+...++ |.||||++++++||+++|++||++++|++..|||++|+++. +|++++|++.
T Consensus 238 l~~~l~~--~~l~~~~~~~~~~~~~~~l~lPkf~i~~~~dl~~~L~~lGi~~~F~~~~adfs~i~~~~~~~v~~v~qk~~ 315 (371)
T PF00079_consen 238 LEKKLTS--ERLQEIISNLKMRKVDEELSLPKFKIESSIDLKELLKKLGIKDLFDPDSADFSGISDDEPLYVSDVIQKAV 315 (371)
T ss_dssp HHHHHSH--HHHHHHHHHCEEEEEEEEEEEEEEEEEEEEEHHHHHHHTTTTGGGSTTTSSCTTTBSSSTEEEEEEEEEEE
T ss_pred hhhhccc--ccccccccccccccccceeeecccccccccccceeeehhhcccccccccccccccccceeeeeeeccceee
Confidence 9999973 3455555555555556 99999999999999999999999999996589999999544 9999999999
Q ss_pred EEEcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEeCCc
Q 036497 304 IEVKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMFSIL 361 (375)
Q Consensus 304 iev~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~p 361 (375)
|+|||+|++|+|+|.. ... ....+++.+|++||||+|+|+|+.||.|||+|+|.+|
T Consensus 316 i~v~E~G~~a~a~t~~-~~~-~~~~~~~~~f~~drPF~f~I~~~~t~~iLF~G~v~~P 371 (371)
T PF00079_consen 316 IEVDEEGTEAAAATAV-MAS-ISSPPPPIEFIADRPFLFFIRDRSTGSILFMGKVVDP 371 (371)
T ss_dssp EEEESSEEEEEEEEEE-EEE-ESSSSSSEEEECSSEEEEEEEETTTTEEEEEEEESST
T ss_pred eccccccccccccccc-ccc-ccccccCcEEEEcCCEEEEEEECCCCcEEEEEEecCC
Confidence 9999999999999942 222 2223457899999999999999999999999999998
No 20
>cd02055 PZI Protein Z-dependent protease inhibitor (ZPI) is a member of the serpin superfamily of proteinase inhibitors (clade A10). ZPI inhibits coagulation factor Xa , dependent on protein Z (PZ), a vitamin K-dependent plasma protein. ZPI also inhibits factor XIa in a process that does not require PZ. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms.
Probab=100.00 E-value=3.1e-70 Score=524.05 Aligned_cols=336 Identities=28% Similarity=0.383 Sum_probs=287.3
Q ss_pred hhhhhhhHHHHHHHHhcCC--CC-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCCh-----hhHH-HHHHHHHHHHh
Q 036497 7 SISEQTDITLSLSKHIKAP--TS-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSN-----EQQN-FASELVAIVFA 77 (375)
Q Consensus 7 ~~~~~~~f~~~l~~~~~~~--~~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~-----~~~~-~~~~l~~~l~~ 77 (375)
+..++++||++||+++... .+ ++||+||+.+|+|+++||+|+|+.||.++||++.. .+++ .++.+.+.+.
T Consensus 2 ~~~~~~~Fa~~l~~~~~~~~~~Nvv~SP~si~~aL~ml~~GA~g~T~~ql~~~L~~~~~~~~~~~~~~~~~~~l~~~~~- 80 (365)
T cd02055 2 FAEETANFGFNLLRKIAMKHDGNIIFSPFGMSLAMAGLLLAAEGETERQIAKALHLHALKDRDPGLLPALFKGLKDNIS- 80 (365)
T ss_pred cchhhhHHHHHHHHHHhcCCCCcEEEChHHHHHHHHHHHhhcCchHHHHHHHHcCCCCCccccHHHHHHHHHHHHHHhc-
Confidence 4577899999999998753 23 99999999999999999999999999999999752 2344 6666665442
Q ss_pred CCCCCCCCeEEEEEee--eecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCCC
Q 036497 78 DGSANGGPRLSVANGV--WIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSVD 155 (375)
Q Consensus 78 ~~~~~~~~~l~~an~l--~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~~ 155 (375)
.+..+.+++++ |+++++.++++|++.++++|++++..+||.+ ++.+++.||+|++++|+|+|+++++ +++
T Consensus 81 -----~~~~~~l~~~~~~~v~~~~~l~~~F~~~~~~~y~~~~~~vdF~~-~~~a~~~IN~wv~~~T~g~I~~~~~--~i~ 152 (365)
T cd02055 81 -----RNEELGFTQGIFAFIHKDFDVKEAFFNLSKQYFDMECLCMDFQN-ASQAKFLINHNIKKETKGKIPELFD--EID 152 (365)
T ss_pred -----CCcceehHHHHHHHHHCCCCccHHHHHHHHHHhcCeeEEECCCC-hHHHHHHHHHHHHHhhcchHHHHhh--cCC
Confidence 12335555555 9999999999999999999999999999987 5678999999999999999999995 688
Q ss_pred ccCeeEEEEeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeee--cCCeEEEEecccC-----------
Q 036497 156 DSSKLVFANALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTA--FDGFKVLVLPYKQ----------- 222 (375)
Q Consensus 156 ~~t~lvlvna~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~--~~~~~vveLPy~~----------- 222 (375)
++|+++|+||+||+|.|+.||++..|..++||+.+|+.+.||||++.+.+.|.. ..++++++|||++
T Consensus 153 ~~t~l~lvnai~Fkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~vv~LPy~~~~sm~iiLP~~ 232 (365)
T cd02055 153 PESKLILLDYIFFKGKWLTPFDPEFTEIDTFHIDKYKSIKVPMMFGADKFASTFDENFRCHVIKLPYKGKATMLIVIMEK 232 (365)
T ss_pred ccchhhhhHHHHHHHHHhCCCChhhCccceEEcCCCcEEEehhhcccCceeeEEeCCCCeEEEEeeeCCCcEEEEEEcCC
Confidence 999999999999999999999999999999999999999999999988776554 4479999999987
Q ss_pred -CChHHHHHHccCcHHHHhccCCccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCc-CC-C-Cccce
Q 036497 223 -DELPALEKKTGSQSGFLKDHIPYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMV-DS-H-VGVGI 298 (375)
Q Consensus 223 -~~l~~l~~~L~~~~~~l~~~~~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is-~~-~-~vs~~ 298 (375)
.+|..+++.|+. ..+..+....+...++|.||||++++++||+++|++||++++|++ .|||++|+ ++ + +|+++
T Consensus 233 ~~~l~~l~~~l~~--~~l~~~~~~~~~~~v~l~lPKF~i~~~~~l~~~L~~lGi~~~F~~-~adls~i~~~~~~l~vs~v 309 (365)
T cd02055 233 GEDHLALEDHLTM--DLVESWLANMKSRNMDIFFPKFKLDQKYEMHELLRALGIKNIFAP-FADLSELLADGKHLQVSQV 309 (365)
T ss_pred CCCHHHHHHHhhH--HHHHHHHHhccceEEEEEEEEEEEEEEeehHHHHHHcCcchhhcC-cCCcccccCCCCcEEEEee
Confidence 568889999863 345555444455557899999999999999999999999999997 89999986 33 4 99999
Q ss_pred eeeeEEEEcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEe
Q 036497 299 FQKSFIEVKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMF 358 (375)
Q Consensus 299 ~qk~~iev~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v 358 (375)
+|++.|||||+|++|+|+|......++. +..|++||||+|+|+|+.+|.|||+|||
T Consensus 310 ~hka~ievdE~Gt~aaa~t~~~~~~~~~----~~~f~~nrPF~f~I~~~~~~~~LF~G~v 365 (365)
T cd02055 310 LQKAVIEVDEKGTEAAAAIGSEIIAFSM----PPVIKVDRPFHFMIFEETFGMLLFIGRV 365 (365)
T ss_pred eEEEEEEEccCCchhhhhhcceecccCC----CCeEEeeCCEEEEEEECCCCcEEEEEeC
Confidence 9999999999999999999743333332 2479999999999999999999999996
No 21
>PHA02948 serine protease inhibitor-like protein; Provisional
Probab=100.00 E-value=1.9e-69 Score=518.04 Aligned_cols=333 Identities=21% Similarity=0.320 Sum_probs=279.0
Q ss_pred hhhhHHHHHHHHhcCCC---C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCChhhHH-HHHHHHHHHHhCCCCCCC
Q 036497 10 EQTDITLSLSKHIKAPT---S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSNEQQN-FASELVAIVFADGSANGG 84 (375)
Q Consensus 10 ~~~~f~~~l~~~~~~~~---~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~~~~-~~~~l~~~l~~~~~~~~~ 84 (375)
++++||++||+++...+ + +|||+||+.+|+|++.||+|+|++||.++||++. ++++ .++.+.+.+... ...+
T Consensus 20 ~~~~f~~~l~~~l~~~~~~~Nv~~SP~Si~~aL~ml~~GA~G~T~~el~~~L~~~~-~~~~~~~~~l~~~~~~~--~~~~ 96 (373)
T PHA02948 20 GFTNAGILAYKNIQDGNEDDNIVFSPFGYSFSMFMSLLPASGNTRVELLKTMDLRK-RDLGPAFTELISGLAKL--KTSK 96 (373)
T ss_pred cchHHHHHHHHHHHhcCCCCCEEEchHHHHHHHHHHHhccCCcHHHHHHHHhCCCc-hhHHHHHHHHHHHHhcc--cccC
Confidence 67899999999996642 3 9999999999999999999999999999999974 3455 677777666421 1122
Q ss_pred Ce-EEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCCCccCeeEEE
Q 036497 85 PR-LSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSVDDSSKLVFA 163 (375)
Q Consensus 85 ~~-l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~~~~t~lvlv 163 (375)
.. +.++|++|+++++.++++|.+ .+|+++++.+||.+ .+++.||+||+++| +|++++++++++++|+++|+
T Consensus 97 ~~~~~~an~~~v~~~~~~~~~f~~---~~~~~~v~~vdF~~---~a~~~IN~WV~~~T--~I~~~~~~~~i~~~t~lvLv 168 (373)
T PHA02948 97 YTYTDLTYQSFVDNTVCIKPSYYQ---QYHRFGLYRLNFRR---DAVNKINSIVERRS--GMSNVVDSTMLDNNTLWAII 168 (373)
T ss_pred cchHHHHHHHHHhcCCCccHHHHH---HHhhCceEecCccH---HHHHHHHHHHHhcC--CCcccCCCCCCCCCceEEEE
Confidence 23 368999999999999999997 45667999999973 58999999999998 59999988889999999999
Q ss_pred EeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccccc----eeeecCCeEEEEecccC----------CChHHHH
Q 036497 164 NALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQ----LVTAFDGFKVLVLPYKQ----------DELPALE 229 (375)
Q Consensus 164 na~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~----~~~~~~~~~vveLPy~~----------~~l~~l~ 229 (375)
||+||+|.|+.||++..|++++||..+| .+.||||++.+.+ .+.+..++++++|||++ +++..++
T Consensus 169 NaiyFkg~W~~~F~~~~T~~~~F~~~~~-~~~V~mM~~~~~~~~~~~~~~~~~~~vl~LPY~~~~~sM~iiLP~~l~~l~ 247 (373)
T PHA02948 169 NTIYFKGTWQYPFDITKTHNASFTNKYG-TKTVPMMNVVTKLQGNTITIDDEEYDMVRLPYKDANISMYLAIGDNMTHFT 247 (373)
T ss_pred EEEEEeeeecCCCCcccCeeceeEeCCC-CEEchhheeccccccceeeccCcCceEEEEecCCCcEEEEEEcCCcHHHHH
Confidence 9999999999999999999999998877 4799999987644 23355689999999986 4578888
Q ss_pred HHccCcHHHHhccCCccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCCC-CccceeeeeEEEEcC
Q 036497 230 KKTGSQSGFLKDHIPYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDSH-VGVGIFQKSFIEVKE 308 (375)
Q Consensus 230 ~~L~~~~~~l~~~~~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~-~vs~~~qk~~iev~E 308 (375)
+.|+. ..+..+.+..+...++|.||||++++++||+++|+ +|++++|++..|||++|++++ +|++++||+.|||||
T Consensus 248 ~~l~~--~~l~~~~~~~~~~~v~v~lPKFki~~~~~L~~~L~-~~i~~~F~~~~Adfs~is~~~l~vs~v~hka~IeVdE 324 (373)
T PHA02948 248 DSITA--AKLDYWSSQLGNKVYNLKLPRFSIENKRDIKSIAE-MMAPSMFNPDNASFKHMTRDPLYIYKMFQNAKIDVDE 324 (373)
T ss_pred HHhCH--HHHHHHHHhCcceEEEEEeeCEeeeeeccHHHHHH-hhhHhhCCCCcCchhhhccCceEEEeeEEEEEEEECC
Confidence 88863 33444444444455689999999999999999995 669999997679999999877 999999999999999
Q ss_pred CcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEeCCc
Q 036497 309 EGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMFSIL 361 (375)
Q Consensus 309 ~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~p 361 (375)
+||+|+|+|......++. +.+|++||||+|+|+|+.||.|||+|+|.+|
T Consensus 325 ~GteAaAaT~~~~~~~~~----~~~f~~drPFlf~I~~~~t~~iLF~G~v~~P 373 (373)
T PHA02948 325 QGTVAEASTIMVATARSS----PEELEFNTPFVFIIRHDITGFILFMGKVESP 373 (373)
T ss_pred CceEEeecceeeeeccCC----CCeEEeeCCEEEEEEECCCCcEEEEEEecCC
Confidence 999999999743332222 2469999999999999999999999999998
No 22
>cd02053 alpha2AP Alpha2-antiplasmin (alpha2AP) is the primary inhibitor of plasmin, a proteinase that digests fibrin, the main component of blood clots. Alpha2-Antiplasmin forms an inactive 1 : 1 stoichiometric complex with plasmin. It also rapidly crosslinks to fibrin during blood clotting by activated coagulation factor XIII, and as a consequence fibrin becomes more resistant to fibrinolysis. Therefore alpha2AP is important in modulating the effectiveness and persistence of fibrin with respect to its susceptibility to digestion and removal by plasmin. This subgroup corresponds to clade F2 of the serpin superfamily.
Probab=100.00 E-value=4.7e-69 Score=514.13 Aligned_cols=328 Identities=25% Similarity=0.394 Sum_probs=278.3
Q ss_pred hhhhhHHHHHHHHhcCCC---C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCChhhHHHHHHHHHHHHhCCCCCCC
Q 036497 9 SEQTDITLSLSKHIKAPT---S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSNEQQNFASELVAIVFADGSANGG 84 (375)
Q Consensus 9 ~~~~~f~~~l~~~~~~~~---~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~~~~~~~~l~~~l~~~~~~~~~ 84 (375)
.++++||++||+++...+ + ++||+||+.+|+||++||+|+|++||.++||++.... +..+.+.+.+ ...+
T Consensus 3 ~~~~~F~~~l~~~~~~~~~~~N~v~SP~si~~aL~~l~~Ga~g~T~~el~~~L~~~~~~~---~~~~~~~l~~---~~~~ 76 (351)
T cd02053 3 RAMMGFSTDLLSEVAQESTKPNLILSPLSIALALSHLALGAQNETEQRLLKTLHAESLPC---LHHLLSRLRQ---DLGP 76 (351)
T ss_pred cchhhHHHHHHHHHHhhCCCCcEEECcHHHHHHHHHHHhhcChHHHHHHHHhcCCCChHH---HHHHHHHHhc---cCCc
Confidence 467899999999997643 2 9999999999999999999999999999999975433 3344444432 1235
Q ss_pred CeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCCCccCeeEEEE
Q 036497 85 PRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSVDDSSKLVFAN 164 (375)
Q Consensus 85 ~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~~~~t~lvlvn 164 (375)
..+.++|++|++++++++++|.+.++++|++++ +||.+.+..+++.||+||+++|+|+|+++++ +++++|.++|+|
T Consensus 77 ~~l~~an~i~v~~~~~~~~~f~~~~~~~~~~~~--~~~~~~~~~~~~~IN~wv~~~T~g~I~~~~~--~~~~~t~~vlvN 152 (351)
T cd02053 77 GALRLATRMYLQKGFEIKESFLEESEKLYGAKP--VSLTGTKEDDLANINKWVKEATEGQIPNFLS--DLPHDTVLLLLN 152 (351)
T ss_pred cEeehhhHHHHhCCCchhHHHHHHHHHHcCCEE--eecCCCCHHHHHHHHHHHHHhccCchhHhcC--CCCcchHhheee
Confidence 679999999999999999999999999999875 5665445788999999999999999999985 688999999999
Q ss_pred eEEeeccccccccCCCCeeeeeecCCCcEEeecceeccc-cceeee--cCCeEEEEecccC------------C-ChHHH
Q 036497 165 ALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKN-KQLVTA--FDGFKVLVLPYKQ------------D-ELPAL 228 (375)
Q Consensus 165 a~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~-~~~~~~--~~~~~vveLPy~~------------~-~l~~l 228 (375)
|+||+|.|+++|++..|.+++||..+|++++||||++.. .+.|.. ..++++++|||++ . +|.++
T Consensus 153 aiyFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~~~~vleLPy~~~~Sm~iiLP~~~~~~l~~~ 232 (351)
T cd02053 153 AIHFKGFWRNKFDPSLTQRDAFHLDDDFTVSVEMMQASTYPLRWFHLEQPEIQVAKFPFKGNMSFVVLMPTPFTWNVSQV 232 (351)
T ss_pred EEEEeeeecCCCChhcCeecceEECCCceEEeehhcccccceeeEecCCCCeEEEEEecCCCeEEEEEecccccccHHHH
Confidence 999999999999999999999999999999999998753 455543 4589999999997 2 38888
Q ss_pred HHHccCcHHHHhccCCccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCCC-CccceeeeeEEEEc
Q 036497 229 EKKTGSQSGFLKDHIPYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDSH-VGVGIFQKSFIEVK 307 (375)
Q Consensus 229 ~~~L~~~~~~l~~~~~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~-~vs~~~qk~~iev~ 307 (375)
+++|+. ..+..+.. +...++|.||||++++++||+++|++||++++|+. |||++|++++ +|++++||+.||||
T Consensus 233 ~~~l~~--~~l~~~~~--~~~~v~v~lPKFki~~~~~L~~~L~~lGi~~~F~~--adfs~i~~~~~~vs~v~hka~ieVd 306 (351)
T cd02053 233 LANLNW--DDLYRRLP--KERPTKVKLPKLKLDYQLELNEALSQLGLQELFQA--PDLSGISDEPLFVSSVQHQSTLELS 306 (351)
T ss_pred HHhCCH--HHHHHhhc--cceEEEEEccCEEEEeeechHHHHHhCCchhcccc--ccccccCCCCceeeeeeEEEEEEEC
Confidence 888863 23333332 22335899999999999999999999999999985 9999999888 99999999999999
Q ss_pred CCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEe
Q 036497 308 EEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMF 358 (375)
Q Consensus 308 E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v 358 (375)
|+||+|+|+|.+. ..++ ...|+|||||+|+|+|+.||.|||+|+|
T Consensus 307 E~Gt~aaa~t~~~-~~~~-----~~~f~~drPF~f~I~~~~t~~~LF~G~v 351 (351)
T cd02053 307 EKGVEASAATSVA-TSRS-----LSSFSVNRPFLFFIFEDTMGLPLFMGSV 351 (351)
T ss_pred CCcceehhcceee-cccc-----cCeEEcCCCEEEEEEECCCCCEEEEEeC
Confidence 9999999999743 2222 2379999999999999999999999996
No 23
>cd02050 C1_inh C1 inhibitor (C1-Inh) is a protease inhibitor of the serpin family. It plays a pivotal role in regulating the activation of the classical complement pathway and of the contact system, via regulating bradykinin formation, inhibiting factor XII and kallikrein of the contact system, and via acting on factor XI in the coagulation cascade. This subgroup corresponds to clade G of the serpin superfamily.
Probab=100.00 E-value=1.2e-67 Score=504.77 Aligned_cols=324 Identities=24% Similarity=0.357 Sum_probs=274.1
Q ss_pred hhhhHHHHHHHHhcCCC----C-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCCh-hhHH-HHHHHHHHHHhCCCCC
Q 036497 10 EQTDITLSLSKHIKAPT----S-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSN-EQQN-FASELVAIVFADGSAN 82 (375)
Q Consensus 10 ~~~~f~~~l~~~~~~~~----~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~-~~~~-~~~~l~~~l~~~~~~~ 82 (375)
++++||++||+++.... + ++||+||+.+|+||+.||+|+|++||.++|+++.. .+++ .++.+.+
T Consensus 1 ~~~~F~~~l~~~~~~~~~~~~N~v~SP~si~~aL~ml~~GA~g~T~~ql~~~L~~~~~~~~~~~~~~~l~~--------- 71 (352)
T cd02050 1 ALGEFSLKLYQHLSESAKPDTNLLFSPVSIALLLSHLLLGARGKTQRRLESILSYPHDFACVHSALKKLKN--------- 71 (352)
T ss_pred CcchHHHHHHHHHhhccCCCCCEEEChHHHHHHHHHHhcccCccHHHHHHHhcCCCCchhHHHHHHHHhhh---------
Confidence 46899999999997543 3 99999999999999999999999999999999754 2343 4444432
Q ss_pred CCCeEEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCCCccCeeEE
Q 036497 83 GGPRLSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSVDDSSKLVF 162 (375)
Q Consensus 83 ~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~~~~t~lvl 162 (375)
...+.++|+||++++++++++|++.++++|++++..+||.. +.+++.||+||+++|+|+|+++++ +++++|++++
T Consensus 72 -~~~l~~an~i~~~~~~~l~~~f~~~~~~~y~~~~~~~~~~~--~~a~~~IN~wv~~~T~g~I~~~~~--~i~~~t~l~l 146 (352)
T cd02050 72 -KLGLLSASQIFHHPDLHLRESFTNESWQFYKARPRELSNNS--ELNLEMINSWVAKATNNKIPRLLD--SLPSETRLVL 146 (352)
T ss_pred -cchhHHHHHHHHhCCCCccHHHHHHHHHHhCCcceeecCCh--HHHHHHHHHHHHHHhcchHHHHhc--ccCCCceEEE
Confidence 12488899999999999999999999999999999999853 678999999999999999999994 6999999999
Q ss_pred EEeEEeeccccccccCCCCeeeeeecCCCcEEeecceeccc-cceeee--cCCeEEEEecccC-------------CChH
Q 036497 163 ANALYFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKN-KQLVTA--FDGFKVLVLPYKQ-------------DELP 226 (375)
Q Consensus 163 vna~~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~-~~~~~~--~~~~~vveLPy~~-------------~~l~ 226 (375)
+||+||+|.|++||++..|..++|+..+ ..+.||||++.. .+.|.. ..++++++|||++ .+|.
T Consensus 147 vnaiyFkg~W~~~F~~~~T~~~~F~~~~-~~~~V~mM~~~~~~~~~~~~~~l~~~v~~lp~~~~~sm~iiLP~~~~~~l~ 225 (352)
T cd02050 147 LNAVYFQAQWKKKFDTKHTVLLPFKRNG-DPVKVPVMYSKKYPVASFTDPRLKAQVGRLELSGGLSLVVLVPRGPKEDLE 225 (352)
T ss_pred EeeEEEeeecCCCCCcccCccCceeECC-ceEEeeEeecCccceeeEEcCCcCeEEEEecCCCceEEEEEeeCCCCCCHH
Confidence 9999999999999999999999999865 489999998764 333333 3478999999985 3688
Q ss_pred HHHHHccCcHHHHhccCC---ccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCCC--Cccceeee
Q 036497 227 ALEKKTGSQSGFLKDHIP---YEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDSH--VGVGIFQK 301 (375)
Q Consensus 227 ~l~~~L~~~~~~l~~~~~---~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~~--~vs~~~qk 301 (375)
+++++|+. ..+..+.. ......++|.||||++++++||+++|++||++++|+. |||++|+.++ +|++++||
T Consensus 226 ~l~~~l~~--~~~~~~~~~l~~~~~~~v~l~lPKF~i~~~~dl~~~L~~lGi~~~F~~--adfs~i~~~~~l~v~~v~hk 301 (352)
T cd02050 226 AVERALTP--PAFLAMLEKMAANTPQRTEVTLPRIKLDLAVDMVALMHKLGLFGLFLD--ANLCGLYQDPELAVDAAQHR 301 (352)
T ss_pred HHHHhcCH--HHHHHHHHhhhhcCceEEEEEcceEEEeeccchHHHHHHcCChhhccc--cchhhccCCCCeEEEeeEEe
Confidence 99999863 33333322 2223456899999999999999999999999999974 9999999765 99999999
Q ss_pred eEEEEcCCcccchhhhhhhhhhccCCCCCCcEEEecCCeEEEEEECCCCcEEEEEEe
Q 036497 302 SFIEVKEEGTEAAAASAAVITLKSLPRFDKIDFVADHPFIFMIREDATGVVLSLVMF 358 (375)
Q Consensus 302 ~~iev~E~G~~aaa~t~~~~~~~~~~~~~~~~f~~drPFlf~I~~~~t~~ilf~G~v 358 (375)
+.|+|||+||+|+|+|.+. ..++ ..+|++||||+|+|+|+.||.|||+|+|
T Consensus 302 ~~ieVdE~Gt~Aaa~t~~~-~~~~-----~~~f~~drPF~f~I~~~~t~~~LF~G~v 352 (352)
T cd02050 302 AVLTLTEKGVEAAAATATS-FART-----ALSFEALQPFLFVLWDDQAKVPLFMGRV 352 (352)
T ss_pred eEEEECCCchhhhhhcccc-cccc-----cceEEcCCCEEEEEEECCCCceEEEEeC
Confidence 9999999999999999742 2222 2479999999999999999999999996
No 24
>PHA02660 serpin-like protein; Provisional
Probab=100.00 E-value=7.3e-68 Score=505.96 Aligned_cols=320 Identities=23% Similarity=0.350 Sum_probs=271.0
Q ss_pred hhhhhhHHHHHHHHhcCCCC-eeehHHHHHHHHHHHhcCChhHHHHHHHhcCCCChhhHHHHHHHHHHHHhCCCCCCCCe
Q 036497 8 ISEQTDITLSLSKHIKAPTS-SSSPLSIHVLLSMIAAGSKGPTLQQLLSFLKSKSNEQQNFASELVAIVFADGSANGGPR 86 (375)
Q Consensus 8 ~~~~~~f~~~l~~~~~~~~~-v~SP~si~~~L~~l~~ga~g~T~~el~~~L~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 86 (375)
.....+||++||+++.. ++ ++||+||+.+|+||+.||+|+|+.||.++||+.... +. ...
T Consensus 12 ~~~~~~f~~~l~~~~~~-~Nvv~SP~Si~~aL~ml~~GA~G~T~~el~~~L~~~~~~-~~-----------------~~~ 72 (364)
T PHA02660 12 IKMSLDLGFCILKSLHR-FNIVFSPESLKAFLHVLYLGSERETKNELSKYIGHAYSP-IR-----------------KNH 72 (364)
T ss_pred HHHHHHHHHHHHHhcCC-CCEEEChHHHHHHHHHHHhhcCchHHHHHHHHhCccccc-cc-----------------hhh
Confidence 45678899999999975 45 999999999999999999999999999999985321 00 012
Q ss_pred EEEEEeeeecCCCCcchHHHHHHHhhhCCeeeEeeCCCChHHHHHHHHHHHHHHhcccccccCCCCCCCccCeeEEEEeE
Q 036497 87 LSVANGVWIDQSLSFKNTFKQTVDNIYKASSHQVDFQNKAVEVSREINFWAEKETNGFIKEVLPPGSVDDSSKLVFANAL 166 (375)
Q Consensus 87 l~~an~l~~~~~~~l~~~f~~~~~~~~~~~~~~~dF~~~~~~~~~~IN~wv~~~T~g~i~~~l~~~~~~~~t~lvlvna~ 166 (375)
+..+|++|+++++.++++|++.++. |+++++.+||.++++.+++.||+||+++|+ |++++ +++++|+++|+||+
T Consensus 73 l~~an~l~v~~~~~l~~~F~~~~~~-~~~~v~~vdF~~~~~~a~~~IN~WV~~~T~--I~~~~---~~~~~t~l~LvNai 146 (364)
T PHA02660 73 IHNITKVYVDSHLPIHSAFVASMND-MGIDVILADLANHAEPIRRSINEWVYEKTN--IINFL---HYMPDTSILIINAV 146 (364)
T ss_pred HHHHHHHHHhcCCchhHHHHHHHHH-cCCceEEeccccCHHHHHHHHHHHHHhccC--Ccccc---ccCCCchhhhhhhh
Confidence 3458999999999999999999987 899999999987667799999999999998 88887 37889999999999
Q ss_pred EeeccccccccCCCCeeeeeecCCCcEEeecceeccccceeeecCCeEEEEecccC----------------CChHHHHH
Q 036497 167 YFKGVWNEAFDSSKTKEYDFHLLNGGSIKVPFMTSKNKQLVTAFDGFKVLVLPYKQ----------------DELPALEK 230 (375)
Q Consensus 167 ~f~~~W~~~F~~~~T~~~~F~~~~g~~~~v~mM~~~~~~~~~~~~~~~vveLPy~~----------------~~l~~l~~ 230 (375)
||+|.|++||++..|..++||..+|+.+.||||++.+.+.|++.+++++++|||++ ++|.++++
T Consensus 147 yFkg~W~~~F~~~~T~~~~F~~~~~~~~~V~mM~~~~~~~~~~~~~~~vleLPY~~~~~~sM~iiLP~~~~~~~L~~l~~ 226 (364)
T PHA02660 147 QFNGLWKYPFLRKKTTMDIFNIDKVSFKYVNMMTTKGIFNAGRYHQSNIIEIPYDNCSRSHMWIVFPDAISNDQLNQLEN 226 (364)
T ss_pred hcccHhhcCCCcccCcccccccCCCceEeceeccccCeeeeeecCCCeEEECccCCCCceEEEEEeeCCcccchHHHHHH
Confidence 99999999999999999999999999999999999988888877789999999985 14888888
Q ss_pred HccCcHHHHhccCCccceeeeeeeeceeeEecccChHHHHHhCCcccCCCCCCCCCcCCcCC-----C-C--ccceeeee
Q 036497 231 KTGSQSGFLKDHIPYEMIEVGDFRIPRFKISFGIEVSRVLKALGLVLSFSRKGGRLTEMVDS-----H-V--GVGIFQKS 302 (375)
Q Consensus 231 ~L~~~~~~l~~~~~~~~~~~~~l~lPkF~i~~~~dL~~~L~~lGl~~~F~~~~adfs~is~~-----~-~--vs~~~qk~ 302 (375)
.|+. ..+..+........++|.||||++++++||+++|++||++++|+. |||++|+++ + + +++++||+
T Consensus 227 ~l~~--~~l~~~~~~~~~~~v~l~LPKFki~~~~~L~~~L~~lGi~~~F~~--Adfs~i~~~~~~~~~l~~~vs~v~hka 302 (364)
T PHA02660 227 MMHG--DTLKAFKHASRKKYLEISIPKFRIEHSFNAEHLLPSAGIKTLFTN--PNLSRMITQGDKEDDLYPLPPSLYQKI 302 (364)
T ss_pred hhhH--HHHHHHHhhCceeEEEEEccceEeeeeechHHHHHHcCchhhccc--cCccccccCCCcccccccccccceEee
Confidence 8863 334444333344556899999999999999999999999999984 999999753 3 5 79999999
Q ss_pred EEEEcCCcccchhhhhhhhhhccCCCC--------CCcEEEecCCeEEEEEECCCCcEEEEEEeCCc
Q 036497 303 FIEVKEEGTEAAAASAAVITLKSLPRF--------DKIDFVADHPFIFMIREDATGVVLSLVMFSIL 361 (375)
Q Consensus 303 ~iev~E~G~~aaa~t~~~~~~~~~~~~--------~~~~f~~drPFlf~I~~~~t~~ilf~G~v~~p 361 (375)
.|||||+||+|+|+|... . ..+.+ .+.+|++||||+|+|++ ++.|||+|+|.+|
T Consensus 303 ~ieVdE~GteAaaat~~~-~--~~~~~~~~~~~~~~~~~f~~drPFlf~I~~--~~~iLF~G~v~~P 364 (364)
T PHA02660 303 ILEIDEEGTNTKNIAKKM-R--RNPQDEDTQQHLFRIESIYVNRPFIFIIEY--ENEILFIGRISIP 364 (364)
T ss_pred EEEECCCCcHHHHhhhhh-h--hcccccccccccCCCceEEcCCCEEEEEec--CCeEEEEEEecCC
Confidence 999999999999988521 1 11110 12479999999999986 5899999999998
No 25
>PF07037 DUF1323: Putative transcription regulator (DUF1323); InterPro: IPR010749 This family consists of several hypothetical Enterobacterial proteins of around 120 residues in length. The function of this family is unknown.
Probab=41.39 E-value=16 Score=28.92 Aligned_cols=12 Identities=33% Similarity=0.556 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHH
Q 036497 128 EVSREINFWAEK 139 (375)
Q Consensus 128 ~~~~~IN~wv~~ 139 (375)
-++++||+||++
T Consensus 12 ~srQTINrWvRk 23 (122)
T PF07037_consen 12 YSRQTINRWVRK 23 (122)
T ss_pred ccHHHHHHHHHh
Confidence 368999999997
No 26
>PF14679 FANCI_HD1: FANCI helical domain 1; PDB: 3S51_A 3S4Z_A 3S4W_A.
Probab=36.37 E-value=36 Score=25.42 Aligned_cols=29 Identities=31% Similarity=0.461 Sum_probs=18.9
Q ss_pred hHHHHHHHHhcCCC---C-eeehHHHHHHHHHH
Q 036497 13 DITLSLSKHIKAPT---S-SSSPLSIHVLLSMI 41 (375)
Q Consensus 13 ~f~~~l~~~~~~~~---~-v~SP~si~~~L~~l 41 (375)
++|-++.|.+.... . ++|||+++.+|++.
T Consensus 1 eLgrE~lk~lK~~~~~p~~~L~pF~vallLsva 33 (87)
T PF14679_consen 1 ELGRELLKYLKSDQGDPERALSPFSVALLLSVA 33 (87)
T ss_dssp HHHHHHHHHH--SSHHHHHH--HHHHHHHHHHT
T ss_pred ChHHHHHHHHHhcccCCccccChHHHHHHHHHH
Confidence 35667777777655 2 99999999998875
No 27
>PF04079 DUF387: Putative transcriptional regulators (Ypuh-like); InterPro: IPR005234 This family represents ScpB, which along with ScpA (IPR003768 from INTERPRO) interacts with SMC in vivo forming a complex that is required for chromosome condensation and segregation [, ]. The SMC-Scp complex appears to be similar to the MukB-MukE-Muk-F complex in Escherichia coli [], where MukB (IPR007406 from INTERPRO) is the homologue of SMC. ScpA and ScpB have little sequence similarity to MukE (IPR007385 from INTERPRO) or MukF (IPR005582 from INTERPRO), they are predicted to be structurally similar, being predominantly alpha-helical with coiled coil regions. In general scpA and scpB form an operon in most bacterial genomes. Flanking genes are highly variable suggesting that the operon has moved throughout evolution. Bacteria containing an smc gene also contain scpA or scpB but not necessarily both. An exception is found in Deinococcus radiodurans, which contains scpB but neither smc nor scpA. In the archaea the gene order SMC-ScpA is conserved in nearly all species, as is the very short distance between the two genes, indicating co-transcription of the both in different archaeal genera and arguing that interaction of the gene products is not confined to the homologues in Bacillus subtilis. It would seem probable that, in light of all the studies, SMC, ScpA and ScpB proteins or homologues act together in chromosome condensation and segregation in all prokaryotes []. ; GO: 0051304 chromosome separation; PDB: 1T6S_B 2Z99_A.
Probab=34.40 E-value=1.2e+02 Score=25.37 Aligned_cols=71 Identities=18% Similarity=0.291 Sum_probs=45.3
Q ss_pred HHHHHHhcCChhHHHHHHHhcCCCChhhHH-HHHHHHHHHHhCCCCCCCCeEEEEEeeeecCCCCcchHHHHHHHhhhCC
Q 036497 37 LLSMIAAGSKGPTLQQLLSFLKSKSNEQQN-FASELVAIVFADGSANGGPRLSVANGVWIDQSLSFKNTFKQTVDNIYKA 115 (375)
Q Consensus 37 ~L~~l~~ga~g~T~~el~~~L~~~~~~~~~-~~~~l~~~l~~~~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~ 115 (375)
+=|+|+...++-+.++|.++++ +.+++. .+.+|.+.+.. ...+-.+.....-|. +..+++|...+++++..
T Consensus 3 iEAlLF~s~~pvs~~~La~~l~--~~~~v~~~l~~L~~~y~~---~~~gl~l~~~~~~y~---l~tk~~~~~~v~~~~~~ 74 (159)
T PF04079_consen 3 IEALLFASGEPVSIEELAEILG--SEDEVEEALEELQEEYNE---EDRGLELVEVGGGYR---LQTKPEYAEYVEKLFKK 74 (159)
T ss_dssp HHHHHHH-SS-B-HHHHHHHCT---HHHHHHHHHHHHHHHHH---CT-SEEEEEETTEEE---EEE-GGGHHHHHHHHCT
T ss_pred hHhhHHHcCCCCCHHHHHHHhC--CHHHHHHHHHHHHHHhcc---CCCCEEEEEECCEEE---EEEhHHHHHHHHHHhcc
Confidence 4478888889999999999999 455666 77888777643 223444443333332 46788899999888765
No 28
>KOG3498 consensus Preprotein translocase, gamma subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.34 E-value=76 Score=22.11 Aligned_cols=45 Identities=16% Similarity=0.282 Sum_probs=35.0
Q ss_pred CchhHHhhhhhhhHH---HHHHHHhcCCCC-eeehHHHHHHHHHHHhcC
Q 036497 1 MDDVLESISEQTDIT---LSLSKHIKAPTS-SSSPLSIHVLLSMIAAGS 45 (375)
Q Consensus 1 ~~~~~~~~~~~~~f~---~~l~~~~~~~~~-v~SP~si~~~L~~l~~ga 45 (375)
|+++..+++...+|+ .++++.+.+... =|+-.+.+.+.+.+..|-
T Consensus 1 m~~~~~~~~~~~~f~k~s~rf~krC~KPdrKEf~ki~~~~aiGf~~mG~ 49 (67)
T KOG3498|consen 1 MDQVDQLVEPLRDFAKDSIRFVKRCTKPDRKEFTKIAKATAIGFVIMGF 49 (67)
T ss_pred CchHHHhcchHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 778888888888885 567777776665 788888888888887773
No 29
>TIGR00281 segregation and condensation protein B. Shown to be required for chromosome segregation and condensation in B. subtilis.
Probab=31.16 E-value=2.8e+02 Score=23.97 Aligned_cols=77 Identities=17% Similarity=0.229 Sum_probs=47.9
Q ss_pred HHHHHHhcCC-hhHHHHHHHhcCCCChhhHH-HHHHHHHHHHhCCCCCCCCeEEEEEeeeecCCCCcchHHHHHHHhhhC
Q 036497 37 LLSMIAAGSK-GPTLQQLLSFLKSKSNEQQN-FASELVAIVFADGSANGGPRLSVANGVWIDQSLSFKNTFKQTVDNIYK 114 (375)
Q Consensus 37 ~L~~l~~ga~-g~T~~el~~~L~~~~~~~~~-~~~~l~~~l~~~~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~ 114 (375)
+=|+|+.+.. |-|.++|.++++....+.+. ....+...... ...+-.+.-.+.-|. +..+++|...+.+++.
T Consensus 6 iEAlLF~sg~pgls~~~La~il~~~~~~~~~~~l~~l~~~~~~---~~~gl~l~~~~~~y~---l~tk~e~~~~i~~~~~ 79 (186)
T TIGR00281 6 IEALLFVSGEPGVTLAELVRILGKEKAEKLNAIMELLEDYLSR---DTAGIEIIKFGQSYS---LVTKPAFADYIHRFLP 79 (186)
T ss_pred HHHHHHHcCCCCCCHHHHHHHhCCCchHHHHHHHHHHHHHHhc---CCCCEEEEEECCEEE---EEEhHHHHHHHHHHhc
Confidence 3467777666 59999999999987544444 44444433321 122344444444442 5788999999998876
Q ss_pred CeeeE
Q 036497 115 ASSHQ 119 (375)
Q Consensus 115 ~~~~~ 119 (375)
.....
T Consensus 80 ~~~~~ 84 (186)
T TIGR00281 80 AKLKN 84 (186)
T ss_pred ccccc
Confidence 54433
No 30
>COG1386 scpB Chromosome segregation and condensation protein B [DNA replication, recombination and repair]
Probab=24.86 E-value=2.2e+02 Score=24.55 Aligned_cols=70 Identities=19% Similarity=0.262 Sum_probs=39.9
Q ss_pred HHHHhcCChhHHHHHHHhcCCCChhhHH-HHHHHHHHHHhCCCCCCCCeEEEEEeeeecCCCCcchHHHHHHHhhhCCe
Q 036497 39 SMIAAGSKGPTLQQLLSFLKSKSNEQQN-FASELVAIVFADGSANGGPRLSVANGVWIDQSLSFKNTFKQTVDNIYKAS 116 (375)
Q Consensus 39 ~~l~~ga~g~T~~el~~~L~~~~~~~~~-~~~~l~~~l~~~~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~~~ 116 (375)
++|+.|..|-|.++|.++|+.....++. ....+.... ...+..+.....-|- +..++.|...+.++....
T Consensus 15 all~a~~~pls~~~L~~il~~~~~~~~~~~l~~l~~~y-----~~rg~~L~~~~~~~r---~~t~~~~~~~~~~l~~~~ 85 (184)
T COG1386 15 ALLFAGGEPLSLKELAEILGIVSADAIIDALAELKEEY-----EDRGLELVEVAEGWR---LQTKQEYAEYLEKLQEQR 85 (184)
T ss_pred HHHHhcCCCCCHHHHHHHhCCCchHHHHHHHHHHHHhh-----cCCCeeEEEEcCcee---EEehHHHHHHHHHHhccc
Confidence 5788899999999999999986333333 444444332 223444444333332 233445555555544433
No 31
>PF01666 DX: DX module; InterPro: IPR002593 This domain has no known function. It is found in several Caenorhabditis elegans proteins. The domain contains 6 conserved cysteines that probably form three disulphide bridges.
Probab=24.79 E-value=84 Score=22.79 Aligned_cols=28 Identities=14% Similarity=0.125 Sum_probs=22.6
Q ss_pred ecCCeEEEEEECCCCcEEEEEEeCCcch
Q 036497 336 ADHPFIFMIREDATGVVLSLVMFSILSI 363 (375)
Q Consensus 336 ~drPFlf~I~~~~t~~ilf~G~v~~p~~ 363 (375)
+.+-|.|+-=|..|+.|.+||.+..=.+
T Consensus 14 ip~~~~~~fCdp~t~ki~imG~~~~~g~ 41 (76)
T PF01666_consen 14 IPPNFSFAFCDPETGKIVIMGEENFNGQ 41 (76)
T ss_pred CCCCcceEEECCcCCeEEEEeeeccCCc
Confidence 4667788888999999999999875443
No 32
>PRK00135 scpB segregation and condensation protein B; Reviewed
Probab=24.00 E-value=2.8e+02 Score=23.94 Aligned_cols=72 Identities=19% Similarity=0.257 Sum_probs=46.9
Q ss_pred HHHHHHhcCC-hhHHHHHHHhcCCCChhhHH-HHHHHHHHHHhCCCCCCCCeEEEEEeeeecCCCCcchHHHHHHHhhhC
Q 036497 37 LLSMIAAGSK-GPTLQQLLSFLKSKSNEQQN-FASELVAIVFADGSANGGPRLSVANGVWIDQSLSFKNTFKQTVDNIYK 114 (375)
Q Consensus 37 ~L~~l~~ga~-g~T~~el~~~L~~~~~~~~~-~~~~l~~~l~~~~~~~~~~~l~~an~l~~~~~~~l~~~f~~~~~~~~~ 114 (375)
+=|+|+.... |-+..+|.++++.+. .++. .+..|...+.. ...+-.+.-...-|. +..+++|...+++++.
T Consensus 9 iEA~LF~sg~pgls~~~La~~l~~~~-~~v~~~l~~L~~~y~~---~~~gi~i~~~~~~y~---l~tk~e~~~~v~~~~~ 81 (188)
T PRK00135 9 IEALLFVSGEEGLSLEQLAEILELEP-TEVQQLLEELQEKYEG---DDRGLKLIEFNDVYK---LVTKEENADYLQKLVK 81 (188)
T ss_pred HHHHHHHcCCCCCCHHHHHHHHCCCH-HHHHHHHHHHHHHHhh---CCCCEEEEEECCEEE---EEEcHHHHHHHHHHhc
Confidence 3466776666 689999999999764 3455 67777665532 123444443333343 5788999999988765
Q ss_pred C
Q 036497 115 A 115 (375)
Q Consensus 115 ~ 115 (375)
.
T Consensus 82 ~ 82 (188)
T PRK00135 82 T 82 (188)
T ss_pred c
Confidence 4
No 33
>KOG0572 consensus Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=22.34 E-value=68 Score=30.89 Aligned_cols=36 Identities=17% Similarity=0.118 Sum_probs=28.8
Q ss_pred cEEEecCCeEEEEEECCCCcEEEEEEeCCcchhhhhhh
Q 036497 332 IDFVADHPFIFMIREDATGVVLSLVMFSILSIINKVVL 369 (375)
Q Consensus 332 ~~f~~drPFlf~I~~~~t~~ilf~G~v~~p~~~~~~~~ 369 (375)
+-+.+|+ +|.+||..-+.||-+|+..+|.-.+-.|+
T Consensus 171 v~m~~d~--l~avRDp~G~RPL~iG~r~~~~g~~~~v~ 206 (474)
T KOG0572|consen 171 VFMTADK--LYAVRDPYGNRPLCIGRRSNPDGTEAWVV 206 (474)
T ss_pred EEEEccE--EEEEecCCCCccceEeeecCCCCcceEEE
Confidence 4566676 99999999999999999999976444443
No 34
>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A.
Probab=22.02 E-value=2.7e+02 Score=21.90 Aligned_cols=33 Identities=18% Similarity=0.362 Sum_probs=26.5
Q ss_pred hhhhHHHHHHHHhcCCCCeeehHHHHHHHHHHHhcCC
Q 036497 10 EQTDITLSLSKHIKAPTSSSSPLSIHVLLSMIAAGSK 46 (375)
Q Consensus 10 ~~~~f~~~l~~~~~~~~~v~SP~si~~~L~~l~~ga~ 46 (375)
....|+-+..+.+... ||+|+..++-++..|..
T Consensus 28 ~~~~~a~~~~~~l~~~----SP~Sl~vt~~~l~~~~~ 60 (118)
T PF13766_consen 28 DGDEWAQKTLETLRSG----SPLSLKVTFEQLRRGRN 60 (118)
T ss_dssp HS-HHHHHHHHHHCCS-----HHHHHHHHHHHHCCTT
T ss_pred cCcHHHHHHHHHHHHC----CHHHHHHHHHHHHHhhh
Confidence 4456888888888765 99999999999999987
Done!