Query 036498
Match_columns 294
No_of_seqs 208 out of 1906
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 02:41:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036498.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036498hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 1.3E-74 2.7E-79 495.5 19.1 282 3-292 2-284 (303)
2 PTZ00480 serine/threonine-prot 100.0 6.1E-72 1.3E-76 511.5 27.8 290 4-293 11-301 (320)
3 PTZ00244 serine/threonine-prot 100.0 7.4E-72 1.6E-76 507.8 26.4 291 1-291 1-292 (294)
4 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 1.8E-71 3.9E-76 505.8 26.1 290 4-293 2-292 (293)
5 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1.1E-70 2.5E-75 498.7 27.2 282 4-293 2-284 (285)
6 cd07420 MPP_RdgC Drosophila me 100.0 1.2E-70 2.5E-75 503.8 26.7 281 3-291 6-321 (321)
7 KOG0374 Serine/threonine speci 100.0 1.8E-70 3.8E-75 503.5 24.8 290 4-293 9-303 (331)
8 PTZ00239 serine/threonine prot 100.0 5.2E-70 1.1E-74 497.2 27.4 284 1-293 1-286 (303)
9 smart00156 PP2Ac Protein phosp 100.0 7.6E-69 1.6E-73 484.7 26.0 270 24-293 1-270 (271)
10 cd07416 MPP_PP2B PP2B, metallo 100.0 3.2E-68 6.9E-73 487.3 27.9 283 3-293 2-297 (305)
11 cd07417 MPP_PP5_C PP5, C-termi 100.0 1.8E-68 3.8E-73 490.1 26.0 283 3-293 15-304 (316)
12 cd07419 MPP_Bsu1_C Arabidopsis 100.0 1.7E-66 3.7E-71 477.7 26.5 274 19-292 16-311 (311)
13 KOG0373 Serine/threonine speci 100.0 9.4E-66 2E-70 434.7 17.8 281 3-291 5-287 (306)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 2.8E-63 6E-68 461.5 27.1 288 4-292 12-365 (377)
15 KOG0375 Serine-threonine phosp 100.0 3.1E-60 6.8E-65 425.2 13.3 262 23-284 60-334 (517)
16 KOG0371 Serine/threonine prote 100.0 1.7E-57 3.8E-62 392.3 12.5 281 5-293 21-302 (319)
17 KOG0377 Protein serine/threoni 100.0 5.4E-54 1.2E-58 393.1 11.4 280 3-290 120-429 (631)
18 KOG0376 Serine-threonine phosp 100.0 2.4E-44 5.2E-49 336.0 12.7 270 23-293 182-458 (476)
19 cd00144 MPP_PPP_family phospho 100.0 1.6E-36 3.4E-41 266.7 18.7 214 54-278 1-224 (225)
20 cd07425 MPP_Shelphs Shewanella 100.0 2.3E-28 5.1E-33 213.2 11.9 176 54-264 1-197 (208)
21 PRK13625 bis(5'-nucleosyl)-tet 99.9 3.4E-27 7.3E-32 210.9 13.7 121 52-174 2-146 (245)
22 cd07413 MPP_PA3087 Pseudomonas 99.9 7.2E-26 1.6E-30 199.4 13.2 115 54-171 2-143 (222)
23 cd07423 MPP_PrpE Bacillus subt 99.9 3.5E-25 7.6E-30 196.6 15.3 122 51-174 1-143 (234)
24 PRK00166 apaH diadenosine tetr 99.9 3.3E-25 7.2E-30 200.4 13.2 218 52-283 2-262 (275)
25 PRK11439 pphA serine/threonine 99.9 3.9E-25 8.5E-30 194.3 12.0 177 51-266 17-208 (218)
26 cd07422 MPP_ApaH Escherichia c 99.9 2.6E-25 5.6E-30 199.2 7.4 119 53-175 1-126 (257)
27 TIGR00668 apaH bis(5'-nucleosy 99.9 7.9E-25 1.7E-29 196.6 7.4 120 52-175 2-128 (279)
28 PHA02239 putative protein phos 99.9 9.5E-24 2.1E-28 187.1 11.9 171 52-264 2-219 (235)
29 cd07424 MPP_PrpA_PrpB PrpA and 99.9 2.3E-23 4.9E-28 181.6 12.5 167 51-248 1-182 (207)
30 cd07421 MPP_Rhilphs Rhilph pho 99.9 7.5E-23 1.6E-27 184.2 13.8 187 51-266 2-281 (304)
31 PRK09968 serine/threonine-spec 99.9 1.3E-22 2.7E-27 178.3 8.4 115 51-171 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.5 8.1E-13 1.7E-17 107.6 11.6 158 52-245 2-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.3 7.4E-11 1.6E-15 97.7 12.9 83 52-171 1-86 (155)
34 PF12850 Metallophos_2: Calcin 99.3 3.3E-11 7.1E-16 99.2 10.2 135 52-262 2-136 (156)
35 cd07379 MPP_239FB Homo sapiens 99.2 1.7E-10 3.7E-15 93.6 10.9 118 52-250 1-120 (135)
36 TIGR00040 yfcE phosphoesterase 99.2 2.4E-10 5.2E-15 95.2 12.1 62 52-122 2-64 (158)
37 PRK09453 phosphodiesterase; Pr 99.2 9.6E-11 2.1E-15 100.0 8.0 68 52-123 2-77 (182)
38 cd07397 MPP_DevT Myxococcus xa 99.1 1.2E-09 2.5E-14 96.8 10.9 63 52-124 2-65 (238)
39 cd07394 MPP_Vps29 Homo sapiens 98.9 3.6E-08 7.8E-13 84.0 14.6 59 52-122 1-65 (178)
40 cd07392 MPP_PAE1087 Pyrobaculu 98.9 9.3E-09 2E-13 87.1 10.7 65 53-123 1-66 (188)
41 cd00838 MPP_superfamily metall 98.9 1.8E-08 3.8E-13 79.1 10.6 118 54-251 1-120 (131)
42 PRK05340 UDP-2,3-diacylglucosa 98.8 3.3E-08 7.2E-13 88.1 10.7 212 52-290 2-238 (241)
43 cd07404 MPP_MS158 Microscilla 98.8 1.4E-08 3.1E-13 85.0 7.6 67 53-122 1-68 (166)
44 COG0639 ApaH Diadenosine tetra 98.8 1E-08 2.2E-13 82.7 6.4 141 126-267 5-154 (155)
45 cd07403 MPP_TTHA0053 Thermus t 98.8 7E-08 1.5E-12 77.8 10.3 107 54-250 1-107 (129)
46 cd07388 MPP_Tt1561 Thermus the 98.8 1.2E-08 2.6E-13 89.9 6.2 71 51-122 5-75 (224)
47 TIGR03729 acc_ester putative p 98.6 3.1E-07 6.8E-12 81.6 11.1 68 52-122 1-74 (239)
48 cd07400 MPP_YydB Bacillus subt 98.6 6.1E-07 1.3E-11 73.1 11.5 118 53-251 1-130 (144)
49 TIGR01854 lipid_A_lpxH UDP-2,3 98.6 1.6E-07 3.4E-12 83.2 7.9 205 53-282 1-229 (231)
50 cd07399 MPP_YvnB Bacillus subt 98.4 8.7E-06 1.9E-10 71.3 15.2 192 52-292 2-213 (214)
51 COG0622 Predicted phosphoester 98.4 6.4E-06 1.4E-10 69.7 13.4 118 51-247 2-122 (172)
52 cd07396 MPP_Nbla03831 Homo sap 98.4 4.5E-06 9.8E-11 75.5 13.0 73 52-124 2-88 (267)
53 COG2129 Predicted phosphoester 98.3 7.3E-05 1.6E-09 65.1 17.5 211 51-290 4-224 (226)
54 cd07402 MPP_GpdQ Enterobacter 98.3 3.2E-06 6.9E-11 74.7 9.4 67 52-122 1-83 (240)
55 cd07395 MPP_CSTP1 Homo sapiens 98.3 2.2E-05 4.8E-10 70.5 14.6 58 224-283 196-254 (262)
56 PRK11340 phosphodiesterase Yae 98.3 1.1E-06 2.5E-11 79.6 5.9 70 51-122 50-125 (271)
57 cd07385 MPP_YkuE_C Bacillus su 98.3 1.2E-06 2.7E-11 76.4 5.5 72 51-124 2-78 (223)
58 cd07383 MPP_Dcr2 Saccharomyces 98.2 9.6E-06 2.1E-10 70.0 9.8 70 51-120 3-87 (199)
59 cd07393 MPP_DR1119 Deinococcus 98.2 2.9E-05 6.2E-10 68.8 12.3 45 222-268 181-228 (232)
60 cd07398 MPP_YbbF-LpxH Escheric 98.1 1.2E-06 2.5E-11 76.3 2.8 27 222-248 177-203 (217)
61 PRK11148 cyclic 3',5'-adenosin 98.1 0.0001 2.2E-09 66.9 15.6 70 51-122 15-98 (275)
62 cd07391 MPP_PF1019 Pyrococcus 98.0 1.4E-05 3.1E-10 67.4 6.9 58 66-123 30-89 (172)
63 COG1409 Icc Predicted phosphoh 97.9 0.00062 1.3E-08 61.3 16.5 73 52-125 2-81 (301)
64 COG2908 Uncharacterized protei 97.9 1.7E-05 3.7E-10 69.7 5.4 202 54-288 1-233 (237)
65 cd07401 MPP_TMEM62_N Homo sapi 97.9 6.4E-05 1.4E-09 67.6 9.3 72 53-124 2-91 (256)
66 PF06874 FBPase_2: Firmicute f 97.9 7.5E-05 1.6E-09 73.6 9.9 69 222-292 507-585 (640)
67 TIGR00619 sbcd exonuclease Sbc 97.9 2.3E-05 5E-10 70.4 5.6 71 52-122 2-88 (253)
68 cd08165 MPP_MPPE1 human MPPE1 97.8 0.00013 2.9E-09 60.7 9.6 47 77-123 38-90 (156)
69 PRK04036 DNA polymerase II sma 97.8 3.1E-05 6.6E-10 76.3 6.6 112 51-170 244-388 (504)
70 PHA02546 47 endonuclease subun 97.8 3.7E-05 8E-10 72.1 5.4 72 52-123 2-90 (340)
71 cd00840 MPP_Mre11_N Mre11 nucl 97.7 4.2E-05 9.1E-10 66.4 5.2 74 52-125 1-92 (223)
72 cd00839 MPP_PAPs purple acid p 97.7 0.00014 3E-09 66.2 8.5 70 51-124 5-83 (294)
73 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.7 8.5E-05 1.8E-09 67.1 6.1 70 53-122 1-86 (262)
74 cd07390 MPP_AQ1575 Aquifex aeo 97.5 0.00014 3E-09 61.2 5.3 67 53-124 1-84 (168)
75 TIGR00024 SbcD_rel_arch putati 97.5 0.00019 4.1E-09 63.4 6.4 69 51-123 15-103 (225)
76 TIGR00583 mre11 DNA repair pro 97.4 0.00024 5.1E-09 68.1 5.8 73 51-123 4-124 (405)
77 PRK10966 exonuclease subunit S 97.2 0.00048 1E-08 66.1 5.5 71 52-123 2-88 (407)
78 cd07386 MPP_DNA_pol_II_small_a 97.1 0.00071 1.5E-08 60.2 5.5 68 54-123 2-95 (243)
79 COG1408 Predicted phosphohydro 97.1 0.00079 1.7E-08 61.6 5.5 73 51-125 45-121 (284)
80 COG1311 HYS2 Archaeal DNA poly 96.9 0.0036 7.9E-08 60.2 8.1 209 52-283 227-462 (481)
81 cd08163 MPP_Cdc1 Saccharomyces 96.8 0.033 7.2E-07 50.2 13.4 24 221-244 203-226 (257)
82 cd07380 MPP_CWF19_N Schizosacc 96.7 0.0025 5.5E-08 52.7 4.7 66 54-120 1-68 (150)
83 PF14582 Metallophos_3: Metall 96.7 0.0018 4E-08 56.7 3.9 74 50-123 5-103 (255)
84 cd07384 MPP_Cdc1_like Saccharo 96.6 0.0027 5.9E-08 53.6 4.4 48 76-123 44-101 (171)
85 cd08166 MPP_Cdc1_like_1 unchar 96.6 0.003 6.4E-08 54.5 4.5 46 77-122 42-93 (195)
86 cd00845 MPP_UshA_N_like Escher 96.5 0.0029 6.3E-08 56.3 4.3 66 52-122 2-82 (252)
87 COG4186 Predicted phosphoester 96.5 0.006 1.3E-07 50.3 5.5 70 52-125 5-89 (186)
88 COG0420 SbcD DNA repair exonuc 96.2 0.008 1.7E-07 57.3 5.5 72 52-123 2-89 (390)
89 PLN02533 probable purple acid 95.9 0.01 2.3E-07 57.3 4.8 71 50-123 139-212 (427)
90 cd07410 MPP_CpdB_N Escherichia 95.8 0.0095 2.1E-07 54.0 4.0 66 52-122 2-95 (277)
91 cd08164 MPP_Ted1 Saccharomyces 95.6 0.017 3.6E-07 49.8 4.6 67 56-122 22-111 (193)
92 KOG3325 Membrane coat complex 95.3 0.24 5.1E-06 40.7 9.8 115 53-250 3-123 (183)
93 cd07378 MPP_ACP5 Homo sapiens 95.2 0.032 6.9E-07 50.3 5.1 70 52-122 2-83 (277)
94 COG1407 Predicted ICC-like pho 95.0 0.059 1.3E-06 47.7 6.0 102 49-173 18-141 (235)
95 KOG0376 Serine-threonine phosp 95.0 0.018 4E-07 55.4 2.9 113 23-137 14-131 (476)
96 cd07387 MPP_PolD2_C PolD2 (DNA 94.8 0.68 1.5E-05 41.7 12.5 42 235-281 204-247 (257)
97 cd07408 MPP_SA0022_N Staphyloc 94.5 0.044 9.4E-07 49.2 4.2 66 52-122 2-82 (257)
98 cd07412 MPP_YhcR_N Bacillus su 94.3 0.04 8.8E-07 50.4 3.5 66 52-122 2-88 (288)
99 KOG1432 Predicted DNA repair e 94.2 0.14 3.1E-06 47.5 6.7 49 76-124 99-149 (379)
100 cd07411 MPP_SoxB_N Thermus the 92.9 0.12 2.6E-06 46.5 4.1 64 53-122 3-95 (264)
101 cd00842 MPP_ASMase acid sphing 92.3 0.19 4.1E-06 45.9 4.5 71 53-124 40-124 (296)
102 PF08321 PPP5: PPP5 TPR repeat 92.2 0.35 7.6E-06 36.8 5.1 39 4-49 57-95 (95)
103 COG1768 Predicted phosphohydro 92.1 0.26 5.7E-06 41.8 4.6 44 77-124 43-88 (230)
104 PRK09419 bifunctional 2',3'-cy 91.7 0.17 3.7E-06 55.1 4.0 66 52-122 662-736 (1163)
105 KOG3662 Cell division control 91.4 0.3 6.5E-06 46.7 4.8 45 77-121 93-143 (410)
106 cd07406 MPP_CG11883_N Drosophi 91.0 0.28 6E-06 44.0 4.0 64 53-121 3-82 (257)
107 PF04042 DNA_pol_E_B: DNA poly 90.4 0.65 1.4E-05 40.0 5.7 72 53-124 1-93 (209)
108 cd07409 MPP_CD73_N CD73 ecto-5 90.2 0.38 8.2E-06 43.8 4.3 66 52-122 2-94 (281)
109 KOG2863 RNA lariat debranching 88.0 0.77 1.7E-05 43.0 4.5 73 52-124 2-90 (456)
110 cd07405 MPP_UshA_N Escherichia 87.0 0.65 1.4E-05 42.4 3.5 66 52-122 2-87 (285)
111 COG0737 UshA 5'-nucleotidase/2 86.5 0.62 1.3E-05 46.2 3.3 69 50-123 26-116 (517)
112 KOG2476 Uncharacterized conser 86.3 1.2 2.5E-05 43.1 4.8 70 49-119 4-75 (528)
113 cd07407 MPP_YHR202W_N Saccharo 84.8 0.83 1.8E-05 41.7 3.0 66 52-122 7-97 (282)
114 KOG1378 Purple acid phosphatas 84.8 5.1 0.00011 38.9 8.4 34 224-257 322-355 (452)
115 cd08162 MPP_PhoA_N Synechococc 84.7 0.97 2.1E-05 41.9 3.5 66 52-122 2-91 (313)
116 TIGR00282 metallophosphoestera 84.2 1.3 2.8E-05 40.1 4.0 67 52-123 2-72 (266)
117 TIGR01390 CycNucDiestase 2',3' 82.9 1.2 2.5E-05 45.5 3.5 66 52-122 4-99 (626)
118 cd07382 MPP_DR1281 Deinococcus 82.1 2.1 4.6E-05 38.5 4.5 67 52-123 1-71 (255)
119 PRK09420 cpdB bifunctional 2', 82.1 1.3 2.7E-05 45.3 3.4 69 49-122 24-122 (649)
120 PRK09419 bifunctional 2',3'-cy 81.5 1.4 3E-05 48.2 3.6 67 51-122 42-139 (1163)
121 PRK11907 bifunctional 2',3'-cy 79.1 1.7 3.7E-05 45.5 3.2 67 51-122 116-213 (814)
122 KOG3339 Predicted glycosyltran 78.8 14 0.00029 31.7 7.9 85 79-168 40-140 (211)
123 COG3855 Fbp Uncharacterized pr 78.4 1.3 2.9E-05 42.8 2.0 55 223-278 515-579 (648)
124 KOG3947 Phosphoesterases [Gene 76.8 5.1 0.00011 36.3 5.1 94 23-124 25-128 (305)
125 TIGR01530 nadN NAD pyrophospha 75.5 2.8 6.2E-05 41.9 3.5 65 53-122 3-94 (550)
126 PTZ00422 glideosome-associated 75.1 3.6 7.8E-05 39.4 3.9 72 51-122 27-109 (394)
127 PRK09558 ushA bifunctional UDP 70.9 4.4 9.6E-05 40.5 3.7 67 51-122 35-121 (551)
128 KOG2310 DNA repair exonuclease 69.8 9.1 0.0002 38.0 5.3 49 51-99 14-74 (646)
129 PRK09418 bifunctional 2',3'-cy 67.6 5.5 0.00012 41.6 3.6 67 50-121 39-141 (780)
130 PTZ00235 DNA polymerase epsilo 65.6 18 0.00039 33.2 6.1 73 51-123 28-123 (291)
131 PF06874 FBPase_2: Firmicute f 63.2 5.7 0.00012 40.0 2.6 40 80-124 187-226 (640)
132 KOG0918 Selenium-binding prote 60.7 1.1 2.3E-05 42.6 -2.7 195 78-283 48-251 (476)
133 PF14164 YqzH: YqzH-like prote 60.0 26 0.00057 24.5 4.7 42 4-45 6-47 (64)
134 KOG2679 Purple (tartrate-resis 58.6 7.2 0.00016 35.5 2.2 71 51-122 44-126 (336)
135 PF12641 Flavodoxin_3: Flavodo 55.5 44 0.00094 27.8 6.3 59 54-115 2-73 (160)
136 PF02875 Mur_ligase_C: Mur lig 53.6 48 0.001 24.2 5.7 74 46-119 7-82 (91)
137 COG3855 Fbp Uncharacterized pr 51.7 25 0.00055 34.3 4.7 40 80-124 193-232 (648)
138 PRK10773 murF UDP-N-acetylmura 34.4 1.1E+02 0.0023 29.7 6.4 67 50-117 324-392 (453)
139 PF15007 CEP44: Centrosomal sp 33.7 25 0.00055 28.3 1.5 21 58-78 1-21 (131)
140 PF09587 PGA_cap: Bacterial ca 31.9 67 0.0014 28.4 4.1 40 226-267 208-247 (250)
141 COG0634 Hpt Hypoxanthine-guani 29.4 3.6E+02 0.0077 22.9 9.1 78 20-101 8-116 (178)
142 TIGR00282 metallophosphoestera 28.7 49 0.0011 30.0 2.7 39 80-122 2-41 (266)
143 COG1692 Calcineurin-like phosp 27.6 58 0.0013 29.3 2.8 10 53-62 3-12 (266)
144 PLN00084 photosystem II subuni 26.9 35 0.00077 28.7 1.3 36 84-120 9-51 (214)
145 COG4320 Uncharacterized protei 25.9 39 0.00085 31.5 1.5 29 40-68 46-75 (410)
146 cd07382 MPP_DR1281 Deinococcus 25.8 69 0.0015 28.8 3.1 40 80-122 1-40 (255)
147 PF02609 Exonuc_VII_S: Exonucl 25.7 90 0.0019 20.6 2.9 34 2-43 6-39 (53)
148 PF13258 DUF4049: Domain of un 25.6 55 0.0012 29.2 2.3 60 109-173 127-187 (318)
149 TIGR01143 murF UDP-N-acetylmur 24.4 2.4E+02 0.0052 26.9 6.8 66 50-115 295-362 (417)
150 smart00854 PGA_cap Bacterial c 22.5 1.3E+02 0.0027 26.4 4.1 38 228-267 199-236 (239)
151 cd03030 GRX_SH3BGR Glutaredoxi 22.1 1.2E+02 0.0027 22.6 3.4 23 50-72 60-83 (92)
152 KOG3770 Acid sphingomyelinase 21.8 1.3E+02 0.0029 30.3 4.4 46 80-125 213-266 (577)
153 PF14695 LINES_C: Lines C-term 21.1 1.7E+02 0.0037 18.4 3.2 31 3-38 8-38 (39)
154 KOG3818 DNA polymerase epsilon 20.7 2.7E+02 0.006 27.3 6.1 76 50-125 282-372 (525)
155 PF04263 TPK_catalytic: Thiami 20.5 1.3E+02 0.0027 23.8 3.3 63 52-115 37-121 (123)
156 PLN02965 Probable pheophorbida 20.4 2.8E+02 0.006 24.0 5.9 21 224-244 59-81 (255)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-74 Score=495.50 Aligned_cols=282 Identities=48% Similarity=0.960 Sum_probs=274.0
Q ss_pred chHHHHHHHHcccCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCeeEeeccccChhhHHHHHHhCCCCCCCcee
Q 036498 3 GLEGLLERLLEGRYNRGKRIQMNESEIRQLCFTAKQIFLAQPNLLELEAPINICGDIHGQYPDLLRLFEYGGFPPDSNYL 82 (294)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ep~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~v 82 (294)
-++..||++.+.+ .+.++++..||.++++++.+|+++..++.|+.|+|||||++.+|..+|+.-|-++..+++
T Consensus 2 dldr~ie~L~~~~-------li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YL 74 (303)
T KOG0372|consen 2 DLDRQIEQLRRCE-------LIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYL 74 (303)
T ss_pred cHHHHHHHHHhcC-------CCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceE
Confidence 3788999999987 899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHHHHhhccC-hHHHhHHhhhhccchheeeecC
Q 036498 83 FLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFS-VRLWKHFTECFNCLPVAAVIDD 161 (294)
Q Consensus 83 fLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~lP~~~~i~~ 161 (294)
|||||||||-.|+|++.+|+.||.+||+++++||||||.+.+...|||++||.++|+ ..+|+...+.|+.||++|+|++
T Consensus 75 FLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~ 154 (303)
T KOG0372|consen 75 FLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDG 154 (303)
T ss_pred eecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecC
Confidence 999999999999999999999999999999999999999999999999999999995 6899999999999999999999
Q ss_pred ceEEecCCCCcCCCChHHHhcccCCCCCCCccceeeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeec
Q 036498 162 KILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRA 241 (294)
Q Consensus 162 ~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrg 241 (294)
++||||||++|.+.+++||+.+.|..+.|..+.++|+|||||++. .+|..+|||+|+.||++++++|++.||+++|+|+
T Consensus 155 kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~-~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~Ra 233 (303)
T KOG0372|consen 155 KIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEG-PGWGLSPRGAGYLFGEDVVESFLEANGLSLICRA 233 (303)
T ss_pred cEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccC-CCcccCCCCccccccHHHHHHHHHhCChHHHHHH
Confidence 999999999999999999999999999999999999999999865 7999999999999999999999999999999999
Q ss_pred ceeeccCccccCCccEEEEeccCCCcccccCceeEEEecCceeEEEEEecC
Q 036498 242 HQVVEDGFEFFADRRLVTIFSAPNYCGEFNNAGAFMCVDASLLCSFQILRP 292 (294)
Q Consensus 242 H~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 292 (294)
||-+.+||+..++++|+|||||||||+..+|.+|||.||++..-.|++|+-
T Consensus 234 HQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFea 284 (303)
T KOG0372|consen 234 HQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEA 284 (303)
T ss_pred HHHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeec
Confidence 999999999999999999999999999999999999999999999999874
No 2
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=6.1e-72 Score=511.53 Aligned_cols=290 Identities=72% Similarity=1.378 Sum_probs=278.6
Q ss_pred hHHHHHHHHcccCCC-CcccccCHHHHHHHHHHHHHHHhcCCceeeecCCeeEeeccccChhhHHHHHHhCCCCCCCcee
Q 036498 4 LEGLLERLLEGRYNR-GKRIQMNESEIRQLCFTAKQIFLAQPNLLELEAPINICGDIHGQYPDLLRLFEYGGFPPDSNYL 82 (294)
Q Consensus 4 ~~~~i~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~ep~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~v 82 (294)
++.+|+++++....+ +....++++++.+||++|++++++||++++++++++|||||||++.+|.++|+..++++.+++|
T Consensus 11 ~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~yl 90 (320)
T PTZ00480 11 VDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESNYL 90 (320)
T ss_pred HHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcceEE
Confidence 889999999865333 5666899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHHHHhhccChHHHhHHhhhhccchheeeecCc
Q 036498 83 FLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFSVRLWKHFTECFNCLPVAAVIDDK 162 (294)
Q Consensus 83 fLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~ 162 (294)
|||||||||++++|++.+++++++.+|.++++||||||.+.++..+||..++..+|...+|..+.+.|+.||++|+++++
T Consensus 91 fLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaAiI~~~ 170 (320)
T PTZ00480 91 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVAALIDEK 170 (320)
T ss_pred EeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHhheecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCcCCCChHHHhcccCCCCCCCccceeeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecc
Q 036498 163 ILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAH 242 (294)
Q Consensus 163 ~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH 242 (294)
++|||||++|...++++++.+.||.+.++.+.+.+++||||.....+|.+++||.|+.||++++++||++|++++|||||
T Consensus 171 i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR~H 250 (320)
T PTZ00480 171 ILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICRAH 250 (320)
T ss_pred EEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEEcC
Confidence 99999999999999999999999999999999999999999987789999999999999999999999999999999999
Q ss_pred eeeccCccccCCccEEEEeccCCCcccccCceeEEEecCceeEEEEEecCC
Q 036498 243 QVVEDGFEFFADRRLVTIFSAPNYCGEFNNAGAFMCVDASLLCSFQILRPF 293 (294)
Q Consensus 243 ~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 293 (294)
|++++||+++++++|+||||||+||+..+|+||++.|++++.+.|++|+|.
T Consensus 251 q~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~ 301 (320)
T PTZ00480 251 QVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPA 301 (320)
T ss_pred ccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCC
Confidence 999999999999999999999999999999999999999999999999874
No 3
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=7.4e-72 Score=507.81 Aligned_cols=291 Identities=59% Similarity=1.115 Sum_probs=278.6
Q ss_pred CCchHHHHHHHHcccCCC-CcccccCHHHHHHHHHHHHHHHhcCCceeeecCCeeEeeccccChhhHHHHHHhCCCCCCC
Q 036498 1 MEGLEGLLERLLEGRYNR-GKRIQMNESEIRQLCFTAKQIFLAQPNLLELEAPINICGDIHGQYPDLLRLFEYGGFPPDS 79 (294)
Q Consensus 1 ~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~ep~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~ 79 (294)
|+.++.+|+++++..+.+ +....++++++.+||+++++++++||+++++++|++||||||||+.+|.++|+.+++++.+
T Consensus 1 ~~~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~ 80 (294)
T PTZ00244 1 MSLVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYS 80 (294)
T ss_pred CchHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcc
Confidence 888999999999966443 5556789999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHHHHhhccChHHHhHHhhhhccchheeee
Q 036498 80 NYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFSVRLWKHFTECFNCLPVAAVI 159 (294)
Q Consensus 80 ~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i 159 (294)
+++|||||||||++|+|++.+++++|+.+|.+++++|||||.+.++..+||..++..+|+..+|..+.++|+.||+++++
T Consensus 81 ~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii 160 (294)
T PTZ00244 81 NYLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVI 160 (294)
T ss_pred cEEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEecCCCCcCCCChHHHhcccCCCCCCCccceeeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEe
Q 036498 160 DDKILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLIC 239 (294)
Q Consensus 160 ~~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iI 239 (294)
+++++|||||++|.+.++++++.++||.+.++.+++.|++||||.....+|.+++||.++.||++++++||+++++++||
T Consensus 161 ~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~ii 240 (294)
T PTZ00244 161 SEKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIV 240 (294)
T ss_pred cCeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEE
Confidence 99999999999999999999999999999898999999999999977789999999999999999999999999999999
Q ss_pred ecceeeccCccccCCccEEEEeccCCCcccccCceeEEEecCceeEEEEEec
Q 036498 240 RAHQVVEDGFEFFADRRLVTIFSAPNYCGEFNNAGAFMCVDASLLCSFQILR 291 (294)
Q Consensus 240 rgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~ 291 (294)
||||++++||+++++++|+||||||+||+..+|+||+|.|+++..++|+++.
T Consensus 241 R~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~ 292 (294)
T PTZ00244 241 RAHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIP 292 (294)
T ss_pred EcCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEee
Confidence 9999999999999999999999999999999999999999999999999875
No 4
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=1.8e-71 Score=505.82 Aligned_cols=290 Identities=77% Similarity=1.426 Sum_probs=277.6
Q ss_pred hHHHHHHHHcccCC-CCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCeeEeeccccChhhHHHHHHhCCCCCCCcee
Q 036498 4 LEGLLERLLEGRYN-RGKRIQMNESEIRQLCFTAKQIFLAQPNLLELEAPINICGDIHGQYPDLLRLFEYGGFPPDSNYL 82 (294)
Q Consensus 4 ~~~~i~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~ep~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~v 82 (294)
++.+|+++++.... .+....++++++.+||++|++++++||++++++++++||||||||+.+|.++|+..++++.+++|
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 67889999986533 26667899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHHHHhhccChHHHhHHhhhhccchheeeecCc
Q 036498 83 FLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFSVRLWKHFTECFNCLPVAAVIDDK 162 (294)
Q Consensus 83 fLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~ 162 (294)
|||||||||++++|++.+++++|+.+|.++++||||||.+.++..+||..++..+|...+|..+.++|++||++++++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~ 161 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEK 161 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCcCCCChHHHhcccCCCCCCCccceeeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecc
Q 036498 163 ILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAH 242 (294)
Q Consensus 163 ~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH 242 (294)
++|||||++|...++++++.+.||.+.++.+.+.+++||||.....+|.+++||.++.||++++++||+++|+++|||||
T Consensus 162 i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 241 (293)
T cd07414 162 IFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAH 241 (293)
T ss_pred EEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECC
Confidence 99999999999999999999999999888899999999999987789999999999999999999999999999999999
Q ss_pred eeeccCccccCCccEEEEeccCCCcccccCceeEEEecCceeEEEEEecCC
Q 036498 243 QVVEDGFEFFADRRLVTIFSAPNYCGEFNNAGAFMCVDASLLCSFQILRPF 293 (294)
Q Consensus 243 ~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 293 (294)
|++++||+++++++|+||||||+||+..+|+||+|.|+++..+.|++|+|.
T Consensus 242 e~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 242 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred ccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999999999999999999999999999999985
No 5
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=1.1e-70 Score=498.70 Aligned_cols=282 Identities=51% Similarity=0.980 Sum_probs=271.4
Q ss_pred hHHHHHHHHcccCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCeeEeeccccChhhHHHHHHhCCCCCCCceee
Q 036498 4 LEGLLERLLEGRYNRGKRIQMNESEIRQLCFTAKQIFLAQPNLLELEAPINICGDIHGQYPDLLRLFEYGGFPPDSNYLF 83 (294)
Q Consensus 4 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ep~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vf 83 (294)
++.+|+++++.. .++++++.+||++|++++++||++++++++++||||||||+.+|.++|+..++++.+++||
T Consensus 2 ~~~~~~~~~~~~-------~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lf 74 (285)
T cd07415 2 LDKWIEQLKKCE-------LLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLF 74 (285)
T ss_pred HHHHHHHHHccC-------CCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 678899999866 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHHHHhhccCh-HHHhHHhhhhccchheeeecCc
Q 036498 84 LGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFSV-RLWKHFTECFNCLPVAAVIDDK 162 (294)
Q Consensus 84 LGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lP~~~~i~~~ 162 (294)
||||||||++|+|++.++++++..+|.+++++|||||.+.++..+||..++..+|+. .+|..+.++|+.||++++++++
T Consensus 75 LGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~ 154 (285)
T cd07415 75 LGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQ 154 (285)
T ss_pred EeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCe
Confidence 999999999999999999999999999999999999999999999999999999974 8999999999999999999999
Q ss_pred eEEecCCCCcCCCChHHHhcccCCCCCCCccceeeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecc
Q 036498 163 ILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAH 242 (294)
Q Consensus 163 ~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH 242 (294)
++|||||++|...++++++.++|+.+.+..+.+.+++||||... .+|.+++||.|+.||++++++||+++++++|||||
T Consensus 155 i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 233 (285)
T cd07415 155 IFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDI-EGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAH 233 (285)
T ss_pred EEEEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCcc-CCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcC
Confidence 99999999999999999999999999888889999999999865 78999999999999999999999999999999999
Q ss_pred eeeccCccccCCccEEEEeccCCCcccccCceeEEEecCceeEEEEEecCC
Q 036498 243 QVVEDGFEFFADRRLVTIFSAPNYCGEFNNAGAFMCVDASLLCSFQILRPF 293 (294)
Q Consensus 243 ~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 293 (294)
|++++||++.++++|+||||||+||+..+|+||+|.|+++..+.|.+|+|.
T Consensus 234 e~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~ 284 (285)
T cd07415 234 QLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAA 284 (285)
T ss_pred ccccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccC
Confidence 999999999999999999999999999999999999999999999999985
No 6
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=1.2e-70 Score=503.79 Aligned_cols=281 Identities=33% Similarity=0.623 Sum_probs=257.9
Q ss_pred chHHHHHHHHcccCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecC----CeeEeeccccChhhHHHHHHhCCCCC-
Q 036498 3 GLEGLLERLLEGRYNRGKRIQMNESEIRQLCFTAKQIFLAQPNLLELEA----PINICGDIHGQYPDLLRLFEYGGFPP- 77 (294)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ep~~~~~~~----~i~viGDIHG~~~~l~~~l~~~~~~~- 77 (294)
.++.+|+.+++.. .++++++.+||++|+++|++||++++++. |++|||||||++.+|.++|+..++++
T Consensus 6 ~~~~~i~~~~~~~-------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~ 78 (321)
T cd07420 6 HIDALIEAFKEKQ-------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSP 78 (321)
T ss_pred HHHHHHHHHHccC-------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCc
Confidence 4788899999876 79999999999999999999999999975 89999999999999999999999885
Q ss_pred CCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHHHHhhccC---hHHHhHHhhhhccch
Q 036498 78 DSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFS---VRLWKHFTECFNCLP 154 (294)
Q Consensus 78 ~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~lP 154 (294)
.+++||||||||||++|+||+.+++++|+.+|+++++||||||.+.++..|||..++..+|+ ..+|..+.++|+.||
T Consensus 79 ~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LP 158 (321)
T cd07420 79 ENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLP 158 (321)
T ss_pred cceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCC
Confidence 46799999999999999999999999999999999999999999999999999999999997 789999999999999
Q ss_pred heeeecCceEEecCCCCcCCCChHHHhcccCCCC-----CCC----------------------ccceeeeeccCCCCCC
Q 036498 155 VAAVIDDKILCMHGGLSPEMESLDQIRAIQRPID-----VPD----------------------QGLLCDLLWSDPDRDI 207 (294)
Q Consensus 155 ~~~~i~~~~l~vHgGi~~~~~~~~~i~~~~r~~~-----~~~----------------------~~~~~~llW~dp~~~~ 207 (294)
++++++++++|||||++| ..+++++++++|+.. .+. .+.+.++|||||....
T Consensus 159 laaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~ 237 (321)
T cd07420 159 LATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQK 237 (321)
T ss_pred ceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCC
Confidence 999999999999999996 568999999887421 111 1457899999998665
Q ss_pred CCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecceeeccCccccCCccEEEEeccCCCcccccCceeEEEecCceeEEE
Q 036498 208 RGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFEFFADRRLVTIFSAPNYCGEFNNAGAFMCVDASLLCSF 287 (294)
Q Consensus 208 ~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~ 287 (294)
..|.+++||.|+.||++++++||++|++++||||||++++||++.++++|+|||||||||+..+|+||+|.|+++..++|
T Consensus 238 ~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~f 317 (321)
T cd07420 238 GCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLTPHF 317 (321)
T ss_pred CCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCceeE
Confidence 55777899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEec
Q 036498 288 QILR 291 (294)
Q Consensus 288 ~~~~ 291 (294)
++|.
T Consensus 318 ~~~~ 321 (321)
T cd07420 318 VQYQ 321 (321)
T ss_pred EEeC
Confidence 8873
No 7
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=1.8e-70 Score=503.51 Aligned_cols=290 Identities=70% Similarity=1.254 Sum_probs=277.4
Q ss_pred hHHHHHHHHcccC---CCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCeeEeeccccChhhHHHHHHhCC-CCCCC
Q 036498 4 LEGLLERLLEGRY---NRGKRIQMNESEIRQLCFTAKQIFLAQPNLLELEAPINICGDIHGQYPDLLRLFEYGG-FPPDS 79 (294)
Q Consensus 4 ~~~~i~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~ep~~~~~~~~i~viGDIHG~~~~l~~~l~~~~-~~~~~ 79 (294)
++++|.+++.... .+.....++.+++.+||..+.+++.++|+++++++||.|+|||||++.+|.+++...+ +|+..
T Consensus 9 ~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~ 88 (331)
T KOG0374|consen 9 LDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQ 88 (331)
T ss_pred HHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcc
Confidence 5667777777653 2233556999999999999999999999999999999999999999999999999999 99999
Q ss_pred ceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHHHHhhccC-hHHHhHHhhhhccchheee
Q 036498 80 NYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFS-VRLWKHFTECFNCLPVAAV 158 (294)
Q Consensus 80 ~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~lP~~~~ 158 (294)
++||||||||||++|+|++.+++++|++||++++++|||||.+.++..|||++||.++|+ ..+|..+.+.|+.||++++
T Consensus 89 ~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~ 168 (331)
T KOG0374|consen 89 NYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAAL 168 (331)
T ss_pred cEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhhe
Confidence 999999999999999999999999999999999999999999999999999999999999 6999999999999999999
Q ss_pred ecCceEEecCCCCcCCCChHHHhcccCCCCCCCccceeeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceE
Q 036498 159 IDDKILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLI 238 (294)
Q Consensus 159 i~~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~i 238 (294)
++++++|+|||++|.+.++++++.+.||.+.++.+++.|++|+||.....+|.+|.||.++.||++++++||+++++++|
T Consensus 169 i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldli 248 (331)
T KOG0374|consen 169 IDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLI 248 (331)
T ss_pred ecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceE
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred eecceeeccCccccCCccEEEEeccCCCcccccCceeEEEecCceeEEEEEecCC
Q 036498 239 CRAHQVVEDGFEFFADRRLVTIFSAPNYCGEFNNAGAFMCVDASLLCSFQILRPF 293 (294)
Q Consensus 239 IrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 293 (294)
||+||++.+||+++.++|++||||||+||++++|+||+|.||+++.|+|++++|.
T Consensus 249 vRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 249 VRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred EEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 9999999999999999999999999999999999999999999999999999994
No 8
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=5.2e-70 Score=497.20 Aligned_cols=284 Identities=46% Similarity=0.953 Sum_probs=269.6
Q ss_pred CCchHHHHHHHHcccCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCeeEeeccccChhhHHHHHHhCCCCCCCc
Q 036498 1 MEGLEGLLERLLEGRYNRGKRIQMNESEIRQLCFTAKQIFLAQPNLLELEAPINICGDIHGQYPDLLRLFEYGGFPPDSN 80 (294)
Q Consensus 1 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ep~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~ 80 (294)
|+ ++.+|+.+.+.. .++++++.+||++|++++++||++++++++++|+||||||+.+|.++|+..+.++.++
T Consensus 1 ~~-~~~~~~~~~~~~-------~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~ 72 (303)
T PTZ00239 1 MD-IDRHIATLLNGG-------CLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNAN 72 (303)
T ss_pred CC-HHHHHHHHHccC-------CCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCce
Confidence 55 889999999866 7899999999999999999999999999999999999999999999999999888999
Q ss_pred eeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHHHHhhccCh-HHHhHHhhhhccchheeee
Q 036498 81 YLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFSV-RLWKHFTECFNCLPVAAVI 159 (294)
Q Consensus 81 ~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lP~~~~i 159 (294)
++|||||||||++++|++.+++++|..+|.+++++|||||.+.++..+||..++..+|+. .+|..+.++|++||+++++
T Consensus 73 ~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii 152 (303)
T PTZ00239 73 YIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALI 152 (303)
T ss_pred EEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEE
Confidence 999999999999999999999999999999999999999999999999999999999964 7899999999999999999
Q ss_pred cCceEEecCCCCcCCCChHHHhcccCCCCCCCccceeeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEe
Q 036498 160 DDKILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLIC 239 (294)
Q Consensus 160 ~~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iI 239 (294)
+++++|||||++|...++++++.+.|+.+.+..+.+.|++||||.. ..+|.+++||.|+.||++++++||++|++++||
T Consensus 153 ~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~ii 231 (303)
T PTZ00239 153 EGQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEE-VEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLIC 231 (303)
T ss_pred cCeEEEEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccc-cCCCccCCCCCccccCHHHHHHHHHHCCCcEEE
Confidence 9999999999999999999999999999999889999999999985 478999999999999999999999999999999
Q ss_pred ecceeeccCccccCC-ccEEEEeccCCCcccccCceeEEEecCceeEEEEEecCC
Q 036498 240 RAHQVVEDGFEFFAD-RRLVTIFSAPNYCGEFNNAGAFMCVDASLLCSFQILRPF 293 (294)
Q Consensus 240 rgH~~~~~G~~~~~~-~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 293 (294)
||||++++||+..++ ++|+||||||+||+..+|+||++.++++..+.|.+|+|.
T Consensus 232 R~He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~ 286 (303)
T PTZ00239 232 RAHQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEV 286 (303)
T ss_pred EcChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCC
Confidence 999999999997654 559999999999999999999999999999999999874
No 9
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=7.6e-69 Score=484.74 Aligned_cols=270 Identities=59% Similarity=1.066 Sum_probs=261.4
Q ss_pred cCHHHHHHHHHHHHHHHhcCCceeeecCCeeEeeccccChhhHHHHHHhCCCCCCCceeeeccccccccchHHHHHHHhh
Q 036498 24 MNESEIRQLCFTAKQIFLAQPNLLELEAPINICGDIHGQYPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLLL 103 (294)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~ep~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 103 (294)
++++++.+||++|++++++||+++++++|++||||||||+.+|.++|+..+.++.+++||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCeEEEeccCcccccchhhhchHHHHhhccChHHHhHHhhhhccchheeeecCceEEecCCCCcCCCChHHHhcc
Q 036498 104 YKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFSVRLWKHFTECFNCLPVAAVIDDKILCMHGGLSPEMESLDQIRAI 183 (294)
Q Consensus 104 l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~~ 183 (294)
++..+|.+++++|||||.+.++..+||..++..+++.++|+.+.++|+.||++++++++++|||||++|...++++++++
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i 160 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKL 160 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccceeeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecceeeccCccccCCccEEEEecc
Q 036498 184 QRPIDVPDQGLLCDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFEFFADRRLVTIFSA 263 (294)
Q Consensus 184 ~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~vitifSa 263 (294)
.||.+.+..+.+++++||||.....+|.+++||.++.||++++++||+++|+++||||||++++||+.+++++|+|||||
T Consensus 161 ~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa 240 (271)
T smart00156 161 KRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSA 240 (271)
T ss_pred cCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECC
Confidence 99998888899999999999877789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCceeEEEecCceeEEEEEecCC
Q 036498 264 PNYCGEFNNAGAFMCVDASLLCSFQILRPF 293 (294)
Q Consensus 264 ~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 293 (294)
||||+..+|+||++.|+++..+.|.+++|.
T Consensus 241 ~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 241 PNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred cccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 999998899999999999999999999874
No 10
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=3.2e-68 Score=487.33 Aligned_cols=283 Identities=42% Similarity=0.812 Sum_probs=266.0
Q ss_pred chHHHHHHHHcccCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCeeEeeccccChhhHHHHHHhCCCCCCCcee
Q 036498 3 GLEGLLERLLEGRYNRGKRIQMNESEIRQLCFTAKQIFLAQPNLLELEAPINICGDIHGQYPDLLRLFEYGGFPPDSNYL 82 (294)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ep~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~v 82 (294)
.|+.+++.+++.. .++++++.+||++|++++++||+++++++|++||||||||+.+|.++|+..+.++.+++|
T Consensus 2 ~~~~~~~~~~~~~-------~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~yl 74 (305)
T cd07416 2 RIDVLKAHFMREG-------RLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYL 74 (305)
T ss_pred CHHHHHHHHHcCC-------CCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEE
Confidence 4677888888877 789999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHHHHhhccChHHHhHHhhhhccchheeeecCc
Q 036498 83 FLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFSVRLWKHFTECFNCLPVAAVIDDK 162 (294)
Q Consensus 83 fLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~ 162 (294)
|||||||||++|+||+.+++++|+.+|.++++||||||.+.++..++|..++..++..++|..+.++|++||++++++++
T Consensus 75 FLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~~~ 154 (305)
T cd07416 75 FLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMNQQ 154 (305)
T ss_pred EECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEcCC
Confidence 99999999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred eEEecCCCCcCCCChHHHhcccCCCCCCCccceeeeeccCCCCCCC------CCCcC-CCcceeeeCHHHHHHHHHhcCC
Q 036498 163 ILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRDIR------GWGEN-DRGVSYTFGADKVAEFLNKQDL 235 (294)
Q Consensus 163 ~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~------~~~~~-~rg~~~~fg~~~~~~fl~~~g~ 235 (294)
++|||||++|.+.++++++++.|+.+.+..+.+.|++||||..... +|.++ +||.++.||++++++||++||+
T Consensus 155 i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l 234 (305)
T cd07416 155 FLCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNL 234 (305)
T ss_pred EEEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCC
Confidence 9999999999999999999999998888889999999999975432 47665 8999999999999999999999
Q ss_pred ceEeecceeeccCccccCCc------cEEEEeccCCCcccccCceeEEEecCceeEEEEEecCC
Q 036498 236 DLICRAHQVVEDGFEFFADR------RLVTIFSAPNYCGEFNNAGAFMCVDASLLCSFQILRPF 293 (294)
Q Consensus 236 ~~iIrgH~~~~~G~~~~~~~------~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 293 (294)
++||||||++++||++++++ +|+|||||||||+..+|+||++.|+++. ..|++|++.
T Consensus 235 ~~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~ 297 (305)
T cd07416 235 LSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCS 297 (305)
T ss_pred eEEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCC
Confidence 99999999999999988776 8999999999999999999999999985 689998763
No 11
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=1.8e-68 Score=490.13 Aligned_cols=283 Identities=40% Similarity=0.800 Sum_probs=265.8
Q ss_pred chHHHHHHHHcccCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCC----eeEeeccccChhhHHHHHHhCCCCCC
Q 036498 3 GLEGLLERLLEGRYNRGKRIQMNESEIRQLCFTAKQIFLAQPNLLELEAP----INICGDIHGQYPDLLRLFEYGGFPPD 78 (294)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ep~~~~~~~~----i~viGDIHG~~~~l~~~l~~~~~~~~ 78 (294)
.++.+|+++.+.. .++++++.+||++|++++++||++++++.| ++||||||||+.+|.++|+..++++.
T Consensus 15 ~~~~~~~~~~~~~-------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~ 87 (316)
T cd07417 15 FVKEMIEWFKDQK-------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSE 87 (316)
T ss_pred HHHHHHHHHHccC-------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCc
Confidence 4778888888866 789999999999999999999999999755 99999999999999999999998765
Q ss_pred -CceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHHHHhhccChHHHhHHhhhhccchhee
Q 036498 79 -SNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFSVRLWKHFTECFNCLPVAA 157 (294)
Q Consensus 79 -~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~ 157 (294)
+++||||||||||++|+||+.+++++|+.+|.++++||||||.+.++..+||..++..++...+|..+.++|+.||+++
T Consensus 88 ~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~~l~~~~~~~f~~LPlaa 167 (316)
T cd07417 88 TNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNEQMFDLFSEVFNWLPLAH 167 (316)
T ss_pred cCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccHHHHHHHHHHHHhchHhh
Confidence 4699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCceEEecCCC-CcCCCChHHHhcccCCCCCCCccceeeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCc
Q 036498 158 VIDDKILCMHGGL-SPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLD 236 (294)
Q Consensus 158 ~i~~~~l~vHgGi-~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~ 236 (294)
+++++++|||||+ ++...++++++++.|+.+.+..+.+.+++||||... .+|.+++||.++.||++++++||+++|++
T Consensus 168 ii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~ 246 (316)
T cd07417 168 LINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQ-PGRSPSKRGVGCQFGPDVTKRFLEENNLE 246 (316)
T ss_pred eeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCC-CCCCccCCCCceEeCHHHHHHHHHHcCCc
Confidence 9999999999999 456789999999999988888899999999999864 68999999999999999999999999999
Q ss_pred eEeecceeeccCccccCCccEEEEeccCCCcccccCceeEEEecC-ceeEEEEEecCC
Q 036498 237 LICRAHQVVEDGFEFFADRRLVTIFSAPNYCGEFNNAGAFMCVDA-SLLCSFQILRPF 293 (294)
Q Consensus 237 ~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~-~~~~~~~~~~~~ 293 (294)
+||||||++++||+..++++|+|||||||||+..+|+||+|.|++ ++++.|++|+|.
T Consensus 247 ~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~ 304 (316)
T cd07417 247 YIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAV 304 (316)
T ss_pred EEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCC
Confidence 999999999999999999999999999999999999999999999 899999999864
No 12
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=1.7e-66 Score=477.67 Aligned_cols=274 Identities=47% Similarity=0.890 Sum_probs=254.5
Q ss_pred CcccccCHHHHHHHHHHHHHHHhcCCceeeecCCeeEeeccccChhhHHHHHHhCCCCCC--------Cceeeecccccc
Q 036498 19 GKRIQMNESEIRQLCFTAKQIFLAQPNLLELEAPINICGDIHGQYPDLLRLFEYGGFPPD--------SNYLFLGDYVDR 90 (294)
Q Consensus 19 ~~~~~~~~~~~~~l~~~~~~~~~~ep~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~--------~~~vfLGD~vDr 90 (294)
.....++++++.+||++|++++++||++++++++++||||||||+++|.++|+..++++. .++|||||||||
T Consensus 16 ~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDR 95 (311)
T cd07419 16 DRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDR 95 (311)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCC
Confidence 445678999999999999999999999999999999999999999999999999988754 479999999999
Q ss_pred ccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHHHHhhccCh------HHHhHHhhhhccchheeeecCceE
Q 036498 91 GKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFSV------RLWKHFTECFNCLPVAAVIDDKIL 164 (294)
Q Consensus 91 G~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~lP~~~~i~~~~l 164 (294)
|++|+||+.++++++..+|.++++||||||.+.++..+||..++..+++. .+|..+.++|+.||++++++++++
T Consensus 96 Gp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l 175 (311)
T cd07419 96 GSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKIL 175 (311)
T ss_pred CCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEE
Confidence 99999999999999999999999999999999999999999888887754 689999999999999999998999
Q ss_pred EecCCCCcCCCChHHHhcccCCC-CCCCccceeeeeccCCCCC--CCCCCcCC---Ccce--eeeCHHHHHHHHHhcCCc
Q 036498 165 CMHGGLSPEMESLDQIRAIQRPI-DVPDQGLLCDLLWSDPDRD--IRGWGEND---RGVS--YTFGADKVAEFLNKQDLD 236 (294)
Q Consensus 165 ~vHgGi~~~~~~~~~i~~~~r~~-~~~~~~~~~~llW~dp~~~--~~~~~~~~---rg~~--~~fg~~~~~~fl~~~g~~ 236 (294)
|||||++|...++++++.+.||. ..+..+.+.+++||||... ..+|.+++ ||.| +.||++++++||+++|++
T Consensus 176 ~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~ 255 (311)
T cd07419 176 CMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQ 255 (311)
T ss_pred EEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCe
Confidence 99999999999999999999997 4455678899999999864 35677765 8888 799999999999999999
Q ss_pred eEeecceeeccCccccCCccEEEEeccCCCcccccCceeEEEecCceeEEEEEecC
Q 036498 237 LICRAHQVVEDGFEFFADRRLVTIFSAPNYCGEFNNAGAFMCVDASLLCSFQILRP 292 (294)
Q Consensus 237 ~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~ 292 (294)
+||||||++++||+..++++|+||||||+||+.++|+||++.|+++..++|.+++|
T Consensus 256 ~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 256 MIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred EEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999987
No 13
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-66 Score=434.70 Aligned_cols=281 Identities=45% Similarity=0.931 Sum_probs=270.2
Q ss_pred chHHHHHHHHcccCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCeeEeeccccChhhHHHHHHhCCCCCCCcee
Q 036498 3 GLEGLLERLLEGRYNRGKRIQMNESEIRQLCFTAKQIFLAQPNLLELEAPINICGDIHGQYPDLLRLFEYGGFPPDSNYL 82 (294)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ep~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~v 82 (294)
.+++-|+.+..-+ .|+++++..||+.+++++..|.++..++.|+.|.|||||++.+|..+|+..|--|+..+|
T Consensus 5 d~d~wi~~vk~ck-------yLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYi 77 (306)
T KOG0373|consen 5 DLDQWIETVKKCK-------YLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYI 77 (306)
T ss_pred CHHHHHHHHHHcC-------CCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceE
Confidence 4778888888877 799999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHHHHhhccC-hHHHhHHhhhhccchheeeecC
Q 036498 83 FLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFS-VRLWKHFTECFNCLPVAAVIDD 161 (294)
Q Consensus 83 fLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~lP~~~~i~~ 161 (294)
|+||+||||-.|+|++.+++.||.+||.++++||||||.+.+...|||++||..+|+ ...|+-..+.|+.|+++|+|++
T Consensus 78 FmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~ 157 (306)
T KOG0373|consen 78 FMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDE 157 (306)
T ss_pred EeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999995 5799999999999999999999
Q ss_pred ceEEecCCCCcCCCChHHHhcccCCCCCCCccceeeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeec
Q 036498 162 KILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRA 241 (294)
Q Consensus 162 ~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrg 241 (294)
+++|||||++|+..+++||+-+.|..++|..+.++|++||||+. .+.|.-++||+|+.||.+++++|...|++++|+|+
T Consensus 158 ~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPed-ve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRa 236 (306)
T KOG0373|consen 158 KVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPED-VETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRA 236 (306)
T ss_pred cEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhh-hhhheeCCCCcceeechhhhHHHHhccchHHHHhH
Confidence 99999999999999999999999999999999999999999985 68999999999999999999999999999999999
Q ss_pred ceeeccCccccCCcc-EEEEeccCCCcccccCceeEEEecCceeEEEEEec
Q 036498 242 HQVVEDGFEFFADRR-LVTIFSAPNYCGEFNNAGAFMCVDASLLCSFQILR 291 (294)
Q Consensus 242 H~~~~~G~~~~~~~~-vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~ 291 (294)
||.+.+||+..++.| ++|||||||||+..+|.++||.++.++...+.+|.
T Consensus 237 HQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~ 287 (306)
T KOG0373|consen 237 HQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFS 287 (306)
T ss_pred HHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeee
Confidence 999999999988877 99999999999999999999999999988887774
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=2.8e-63 Score=461.53 Aligned_cols=288 Identities=34% Similarity=0.651 Sum_probs=251.5
Q ss_pred hHHHHHHHHcccCC---CCcccccCHHHHHHHHHHHHHHHhcCCceeeec----CCeeEeeccccChhhHHHHHHhCCCC
Q 036498 4 LEGLLERLLEGRYN---RGKRIQMNESEIRQLCFTAKQIFLAQPNLLELE----APINICGDIHGQYPDLLRLFEYGGFP 76 (294)
Q Consensus 4 ~~~~i~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~ep~~~~~~----~~i~viGDIHG~~~~l~~~l~~~~~~ 76 (294)
++.+|+++....+. ......++.+++.+||++|+++|++||++++++ .+++|||||||++.+|.++|+..+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~~g~~ 91 (377)
T cd07418 12 VHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLEDAGFP 91 (377)
T ss_pred HHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHHhCCC
Confidence 56777777654311 122335789999999999999999999999997 79999999999999999999999988
Q ss_pred CCC-ceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHHHHhhccCh---HHHhHHhhhhcc
Q 036498 77 PDS-NYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFSV---RLWKHFTECFNC 152 (294)
Q Consensus 77 ~~~-~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 152 (294)
+.+ .+||||||||||++|+||+.+++++++.+|.++++||||||.+.++..+||..++..+++. .+|+.+.+||++
T Consensus 92 ~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~~f~~ 171 (377)
T cd07418 92 DQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLGCFEG 171 (377)
T ss_pred CCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHHHHHh
Confidence 654 5999999999999999999999999999999999999999999999999999999988864 699999999999
Q ss_pred chheeeecCceEEecCCCC---------------------------cCCCChHHHhcccCCC-CCCCcc---ceeeeecc
Q 036498 153 LPVAAVIDDKILCMHGGLS---------------------------PEMESLDQIRAIQRPI-DVPDQG---LLCDLLWS 201 (294)
Q Consensus 153 lP~~~~i~~~~l~vHgGi~---------------------------~~~~~~~~i~~~~r~~-~~~~~~---~~~~llW~ 201 (294)
||++++++++++|||||++ |.+.++++|+.++|+. +.+..+ ++.|+|||
T Consensus 172 LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~dlLWS 251 (377)
T cd07418 172 LPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDVLWS 251 (377)
T ss_pred CCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccccceeeEee
Confidence 9999999989999999994 3456899999999974 444433 46899999
Q ss_pred CCCCCCCCCCcC-CCcceeeeCHHHHHHHHHhcCCceEeeccee------------eccCccccCC---ccEEEEeccCC
Q 036498 202 DPDRDIRGWGEN-DRGVSYTFGADKVAEFLNKQDLDLICRAHQV------------VEDGFEFFAD---RRLVTIFSAPN 265 (294)
Q Consensus 202 dp~~~~~~~~~~-~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~------------~~~G~~~~~~---~~vitifSa~~ 265 (294)
||... .+|.++ +||.|+.||++++++||++|++++||||||+ +.+||++.++ ++|+|||||||
T Consensus 252 DP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvFSa~n 330 (377)
T cd07418 252 DPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLITLFSAPD 330 (377)
T ss_pred CCccC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEEEecCCc
Confidence 99864 566665 7999999999999999999999999999996 6799998776 89999999999
Q ss_pred Cc------ccccCceeEEEecCce--eEEEEEecC
Q 036498 266 YC------GEFNNAGAFMCVDASL--LCSFQILRP 292 (294)
Q Consensus 266 y~------~~~~n~ga~l~i~~~~--~~~~~~~~~ 292 (294)
|| +..+|+||++.++.+. ...|++|+-
T Consensus 331 Y~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~ 365 (377)
T cd07418 331 YPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEA 365 (377)
T ss_pred cccccccccccCcceEEEEEecCCCCCccceEeec
Confidence 99 5789999999997655 577777763
No 15
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=3.1e-60 Score=425.21 Aligned_cols=262 Identities=44% Similarity=0.861 Sum_probs=249.7
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCceeeecCCeeEeeccccChhhHHHHHHhCCCCCCCceeeeccccccccchHHHHHHHh
Q 036498 23 QMNESEIRQLCFTAKQIFLAQPNLLELEAPINICGDIHGQYPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLL 102 (294)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ep~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~ 102 (294)
.++++..+.++.+++.++++|++++++++||.|+|||||++.+|.++|+.-|-|...+|+|||||||||..|+||+.+|+
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLw 139 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLW 139 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCeEEEeccCcccccchhhhchHHHHhhccChHHHhHHhhhhccchheeeecCceEEecCCCCcCCCChHHHhc
Q 036498 103 LYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFSVRLWKHFTECFNCLPVAAVIDDKILCMHGGLSPEMESLDQIRA 182 (294)
Q Consensus 103 ~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~ 182 (294)
+||+.+|+.+++||||||++.+..++.|..||..+|+.++|+...+.|+.||++|..++.++|||||++|++.++++|+.
T Consensus 140 sLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~ 219 (517)
T KOG0375|consen 140 SLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRK 219 (517)
T ss_pred HHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccceeeeeccCCCCCC------CCCCcC-CCcceeeeCHHHHHHHHHhcCCceEeecceeeccCccccCCc
Q 036498 183 IQRPIDVPDQGLLCDLLWSDPDRDI------RGWGEN-DRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFEFFADR 255 (294)
Q Consensus 183 ~~r~~~~~~~~~~~~llW~dp~~~~------~~~~~~-~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~ 255 (294)
+.|..+.|..+.++|+||+||.++. ..|..| -||.+|.|...|.++||+.||+--|||.|+.|+.||+.+.+.
T Consensus 220 l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrks 299 (517)
T KOG0375|consen 220 LDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKS 299 (517)
T ss_pred hhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhcc
Confidence 9999999999999999999998653 235555 699999999999999999999999999999999999988776
Q ss_pred c------EEEEeccCCCcccccCceeEEEecCcee
Q 036498 256 R------LVTIFSAPNYCGEFNNAGAFMCVDASLL 284 (294)
Q Consensus 256 ~------vitifSa~~y~~~~~n~ga~l~i~~~~~ 284 (294)
| +|||||||||.+.++|++||++.+.|..
T Consensus 300 qttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNVM 334 (517)
T KOG0375|consen 300 QTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 334 (517)
T ss_pred cccCCchheeeecCCchhhhhccHHHHhhhhcccc
Confidence 5 8999999999999999999999887763
No 16
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-57 Score=392.28 Aligned_cols=281 Identities=47% Similarity=0.939 Sum_probs=267.6
Q ss_pred HHHHHHHHcccCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCeeEeeccccChhhHHHHHHhCCCCCCCceeee
Q 036498 5 EGLLERLLEGRYNRGKRIQMNESEIRQLCFTAKQIFLAQPNLLELEAPINICGDIHGQYPDLLRLFEYGGFPPDSNYLFL 84 (294)
Q Consensus 5 ~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ep~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vfL 84 (294)
+..|+.+.+-. .+++.++..+|+.|++++.++.++..+..|++|+||+||++++|..+++.-|..++..++|+
T Consensus 21 d~~ie~L~~ck-------~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylfm 93 (319)
T KOG0371|consen 21 DPWIEQLYKCK-------PLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYLFM 93 (319)
T ss_pred ccchHHHHhcC-------CCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcceeee
Confidence 44566666655 78999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHHHHhhcc-ChHHHhHHhhhhccchheeeecCce
Q 036498 85 GDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRF-SVRLWKHFTECFNCLPVAAVIDDKI 163 (294)
Q Consensus 85 GD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lP~~~~i~~~~ 163 (294)
|||||||++|.|++.++.++|++||++|.+||||||.+.+...|||++||.+++ ....|..+.+.|+.+|+.+.|++++
T Consensus 94 GDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~i 173 (319)
T KOG0371|consen 94 GDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKI 173 (319)
T ss_pred eeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccce
Confidence 999999999999999999999999999999999999999999999999999999 5679999999999999999999999
Q ss_pred EEecCCCCcCCCChHHHhcccCCCCCCCccceeeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecce
Q 036498 164 LCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQ 243 (294)
Q Consensus 164 l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~ 243 (294)
+|+|||++|.+.+++.++.+.|..+.|....++|+||+||.. ..+|..++||+++.||.+..++|-.++|++++-|.||
T Consensus 174 fc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpdd-r~gwg~sprgag~tfg~di~~~fn~~n~lslisRahq 252 (319)
T KOG0371|consen 174 FCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQ 252 (319)
T ss_pred eeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCccc-CCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHH
Confidence 999999999999999999999988999999999999999985 4889999999999999999999999999999999999
Q ss_pred eeccCccccCCccEEEEeccCCCcccccCceeEEEecCceeEEEEEecCC
Q 036498 244 VVEDGFEFFADRRLVTIFSAPNYCGEFNNAGAFMCVDASLLCSFQILRPF 293 (294)
Q Consensus 244 ~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 293 (294)
-+.+||.......++|||||||||+..+|.+++|.+++.....|.+|+|.
T Consensus 253 lvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~ps 302 (319)
T KOG0371|consen 253 LVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPS 302 (319)
T ss_pred HHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCC
Confidence 99999999999999999999999999999999999999999999999984
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-54 Score=393.14 Aligned_cols=280 Identities=33% Similarity=0.616 Sum_probs=253.6
Q ss_pred chHHHHHHHHcccCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeec----CCeeEeeccccChhhHHHHHHhCCCCCC
Q 036498 3 GLEGLLERLLEGRYNRGKRIQMNESEIRQLCFTAKQIFLAQPNLLELE----APINICGDIHGQYPDLLRLFEYGGFPPD 78 (294)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ep~~~~~~----~~i~viGDIHG~~~~l~~~l~~~~~~~~ 78 (294)
+++.+||.+...+ .|++..++.++.+|++++++.|++-+++ ..+.|+||+||.+++|.-+|-+.|+|..
T Consensus 120 ~i~~lieaFk~kq-------~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~ 192 (631)
T KOG0377|consen 120 HIDLLIEAFKKKQ-------RLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSS 192 (631)
T ss_pred HHHHHHHHHHHhh-------hccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCC
Confidence 5788899888877 8999999999999999999999998874 5799999999999999999999999976
Q ss_pred C-ceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHHHHhhcc---ChHHHhHHhhhhccch
Q 036498 79 S-NYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRF---SVRLWKHFTECFNCLP 154 (294)
Q Consensus 79 ~-~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~lP 154 (294)
+ -|||.||+||||.+|+|||..|+++.+.+|..+++-|||||..++|..|||..|...+| +..+...+.++++.||
T Consensus 193 ~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLP 272 (631)
T KOG0377|consen 193 SNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLP 272 (631)
T ss_pred CCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcc
Confidence 5 59999999999999999999999999999999999999999999999999999998887 6789999999999999
Q ss_pred heeeecCceEEecCCCCcCCCChHHHhcccCCCC-----CC-----------------CccceeeeeccCCCCCCCCCCc
Q 036498 155 VAAVIDDKILCMHGGLSPEMESLDQIRAIQRPID-----VP-----------------DQGLLCDLLWSDPDRDIRGWGE 212 (294)
Q Consensus 155 ~~~~i~~~~l~vHgGi~~~~~~~~~i~~~~r~~~-----~~-----------------~~~~~~~llW~dp~~~~~~~~~ 212 (294)
++.+++.+++++|||++. .+.++-+.+++|... .| ++..+.|++||||.....+|.+
T Consensus 273 i~tiid~~ilvvHGGiSd-~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pN 351 (631)
T KOG0377|consen 273 IGTIIDSRILVVHGGISD-STDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPN 351 (631)
T ss_pred hhhhcccceEEEecCccc-chhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcc
Confidence 999999999999999985 355666666654311 11 2345678999999988888988
Q ss_pred CCCcceeeeCHHHHHHHHHhcCCceEeecceeeccCccccCCccEEEEeccCCCcccccCceeEEEecCceeEEEEEe
Q 036498 213 NDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFEFFADRRLVTIFSAPNYCGEFNNAGAFMCVDASLLCSFQIL 290 (294)
Q Consensus 213 ~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~~~~~~~~ 290 (294)
.-||.|++||++++.+||++.+++++||+|++.++||++.+|++|+|||||+||....+|+||++++.+.+...|-++
T Consensus 352 t~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY 429 (631)
T KOG0377|consen 352 TLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQY 429 (631)
T ss_pred cccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHH
Confidence 899999999999999999999999999999999999999999999999999999999999999999999998877654
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=2.4e-44 Score=335.98 Aligned_cols=270 Identities=42% Similarity=0.829 Sum_probs=253.0
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCceeeec----CCeeEeeccccChhhHHHHHHhCCCCCC-CceeeeccccccccchHHH
Q 036498 23 QMNESEIRQLCFTAKQIFLAQPNLLELE----APINICGDIHGQYPDLLRLFEYGGFPPD-SNYLFLGDYVDRGKQSIET 97 (294)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ep~~~~~~----~~i~viGDIHG~~~~l~~~l~~~~~~~~-~~~vfLGD~vDrG~~s~ev 97 (294)
.++...+.+|+..++.+++..|++++++ .++.+.||+||++.++.+++...+.++. ..++|.||++|||..+.|+
T Consensus 182 ~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~ 261 (476)
T KOG0376|consen 182 KLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEV 261 (476)
T ss_pred ccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceee
Confidence 5777888899999999999999999885 3589999999999999999999998864 5799999999999999999
Q ss_pred HHHHhhhhhcCCCeEEEeccCcccccchhhhchHHHHhhccChHHHhHHhhhhccchheeeecCceEEecCCCC-cCCCC
Q 036498 98 ICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFSVRLWKHFTECFNCLPVAAVIDDKILCMHGGLS-PEMES 176 (294)
Q Consensus 98 l~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~-~~~~~ 176 (294)
...+...++.+|++++++|||||...++..|||..++..+|..+.+..+.+.|..||++..++++++.+|||+. |+-.+
T Consensus 262 ~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~ 341 (476)
T KOG0376|consen 262 ILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVT 341 (476)
T ss_pred eeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCcc
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999986 44568
Q ss_pred hHHHhcccCCCCCCCccceeeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecceeeccCccccCCcc
Q 036498 177 LDQIRAIQRPIDVPDQGLLCDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFEFFADRR 256 (294)
Q Consensus 177 ~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~ 256 (294)
+++++++.|+...++....++++|+||... .+..++.||.+..||++++++||+.+++++|||||++.+.||+.-++|+
T Consensus 342 l~d~r~i~r~~~~~~~~~~~~~lws~pq~~-~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g~ 420 (476)
T KOG0376|consen 342 LEDFRNIDRFEQPPEEGLMCELLWSDPQPA-NGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSGK 420 (476)
T ss_pred HHHHHhhhhccCCcccccccccccCCCccc-cCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCCc
Confidence 999999999977788899999999999875 8899999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCCcccccCceeEEEec-CceeEEEEEecCC
Q 036498 257 LVTIFSAPNYCGEFNNAGAFMCVD-ASLLCSFQILRPF 293 (294)
Q Consensus 257 vitifSa~~y~~~~~n~ga~l~i~-~~~~~~~~~~~~~ 293 (294)
|+|||||||||...+|.||++.++ .+....+..|++.
T Consensus 421 l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~v 458 (476)
T KOG0376|consen 421 LITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAV 458 (476)
T ss_pred EEEEecCcchhhhcCCcceEEEecCCCCccceeecccC
Confidence 999999999999999999999999 7788999998874
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=1.6e-36 Score=266.74 Aligned_cols=214 Identities=51% Similarity=0.853 Sum_probs=174.7
Q ss_pred eEeeccccChhhHHHHHHhCCCCCCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHHH
Q 036498 54 NICGDIHGQYPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDE 133 (294)
Q Consensus 54 ~viGDIHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~ 133 (294)
+|||||||++++|.++++.++..+.+.+|||||++|||+++.+++.+++.++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999888899999999999999999999999988776 8899999999999988766554332
Q ss_pred H---------hhccChHHHhHHhhhhccchheeeecC-ceEEecCCCCcCCCChHHHhcccCCCCCCCccceeeeeccCC
Q 036498 134 C---------KRRFSVRLWKHFTECFNCLPVAAVIDD-KILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDP 203 (294)
Q Consensus 134 ~---------~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp 203 (294)
. .......++....+|+.+||+++.++. +++|||||++|.....++.. ..+......+++|+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 1 223345677888999999999999886 89999999999876555443 2234455689999999
Q ss_pred CCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecceeeccCccccCCccEEEEeccCCCcccccCceeEEE
Q 036498 204 DRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFEFFADRRLVTIFSAPNYCGEFNNAGAFMC 278 (294)
Q Consensus 204 ~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~ 278 (294)
.........+.++. ++++++.|++.++.+.||||||++..|+.+..+++++||+|++.|++..+|..+.+.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 75433333334443 899999999999999999999999988766678899999999999876666666553
No 20
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.95 E-value=2.3e-28 Score=213.16 Aligned_cols=176 Identities=21% Similarity=0.355 Sum_probs=129.9
Q ss_pred eEeeccccChhhHHHHHHhCCC--------CCCCceeeeccccccccchHHHHHHHhhhhhc---CCCeEEEeccCcccc
Q 036498 54 NICGDIHGQYPDLLRLFEYGGF--------PPDSNYLFLGDYVDRGKQSIETICLLLLYKIK---YPDNFFLLRGNHECA 122 (294)
Q Consensus 54 ~viGDIHG~~~~l~~~l~~~~~--------~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~---~~~~v~~lrGNHE~~ 122 (294)
+||||||||+++|+++|+.+++ .+.+.+|++||+||||+++.+|+++++++... .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999875 35678999999999999999999999998754 456899999999999
Q ss_pred cchhhhchHHH-----Hhhc-c-ChHHH---hHHhhhhccchheeeecCceEEecCCCCcCCCChHHHhcccCCCCCCCc
Q 036498 123 SINRIYGFYDE-----CKRR-F-SVRLW---KHFTECFNCLPVAAVIDDKILCMHGGLSPEMESLDQIRAIQRPIDVPDQ 192 (294)
Q Consensus 123 ~~~~~~~~~~~-----~~~~-~-~~~~~---~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~ 192 (294)
.++..+.+... .... . ...++ ..+.+|++++|+...++ +++|||||++|.
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~~------------------- 140 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGPL------------------- 140 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHHH-------------------
Confidence 88654332111 1110 0 11122 44589999999998876 589999999442
Q ss_pred cceeeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecceeeccCccccCCccEEEEeccC
Q 036498 193 GLLCDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFEFFADRRLVTIFSAP 264 (294)
Q Consensus 193 ~~~~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~vitifSa~ 264 (294)
|++.-... ....+ =+...++++++.++.+++|+|||+++.|....+++++|+|.++.
T Consensus 141 -------w~r~y~~~---~~~~~-----~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~ 197 (208)
T cd07425 141 -------WYRGYSKE---TSDKE-----CAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGM 197 (208)
T ss_pred -------HhhHhhhh---hhhcc-----chHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCc
Confidence 22111000 00000 01246888999999999999999999887668999999999854
No 21
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.95 E-value=3.4e-27 Score=210.86 Aligned_cols=121 Identities=22% Similarity=0.422 Sum_probs=95.8
Q ss_pred CeeEeeccccChhhHHHHHHhCCCC---------CCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccc
Q 036498 52 PINICGDIHGQYPDLLRLFEYGGFP---------PDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECA 122 (294)
Q Consensus 52 ~i~viGDIHG~~~~l~~~l~~~~~~---------~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~ 122 (294)
+++||||||||++.|.++|+++++. +.+++|||||||||||+|.+||++++.+. .+.++++|+||||.+
T Consensus 2 ~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~~ 79 (245)
T PRK13625 2 KYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCNK 79 (245)
T ss_pred ceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHHH
Confidence 6899999999999999999998874 45789999999999999999999998874 456899999999998
Q ss_pred cchhhhch-------HHHHhhcc-------ChHHHhHHhhhhccchheeeec-CceEEecCCCCcCC
Q 036498 123 SINRIYGF-------YDECKRRF-------SVRLWKHFTECFNCLPVAAVID-DKILCMHGGLSPEM 174 (294)
Q Consensus 123 ~~~~~~~~-------~~~~~~~~-------~~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~~~~ 174 (294)
+++...+- ..+....+ ...+.+.+.+|++++|++..+. ++++|||||+.|..
T Consensus 80 ~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 80 LYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 77643210 00011111 1346678899999999998774 57999999998863
No 22
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.93 E-value=7.2e-26 Score=199.43 Aligned_cols=115 Identities=25% Similarity=0.422 Sum_probs=90.4
Q ss_pred eEeeccccChhhHHHHHHhCCCC--------CCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccch
Q 036498 54 NICGDIHGQYPDLLRLFEYGGFP--------PDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASIN 125 (294)
Q Consensus 54 ~viGDIHG~~~~l~~~l~~~~~~--------~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~ 125 (294)
+||||||||+++|.++|+.+++. +.+.+|||||||||||+|.+||++++++. .+.++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~--~~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV--DAGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhh--cCCCEEEEEccCcHHHHH
Confidence 69999999999999999998875 46789999999999999999999998876 345799999999998875
Q ss_pred hhhc------hHH-----------HHhhcc--ChHHHhHHhhhhccchheeeecCceEEecCCCC
Q 036498 126 RIYG------FYD-----------ECKRRF--SVRLWKHFTECFNCLPVAAVIDDKILCMHGGLS 171 (294)
Q Consensus 126 ~~~~------~~~-----------~~~~~~--~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~ 171 (294)
...+ +.. ...+.+ ..+..+...+|+++||+.... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 3221 000 111111 123457789999999999876 46999999986
No 23
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.93 E-value=3.5e-25 Score=196.56 Aligned_cols=122 Identities=30% Similarity=0.532 Sum_probs=95.9
Q ss_pred CCeeEeeccccChhhHHHHHHhCCCCC----------CCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcc
Q 036498 51 APINICGDIHGQYPDLLRLFEYGGFPP----------DSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHE 120 (294)
Q Consensus 51 ~~i~viGDIHG~~~~l~~~l~~~~~~~----------~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE 120 (294)
.|++||||||||+.+|+++|+++++.+ .+++|||||+|||||+|.+||+++++++. +.++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 379999999999999999999998753 46899999999999999999999988863 346999999999
Q ss_pred cccchhhhchH-------HHHhhcc---ChHHHhHHhhhhccchheeeec-CceEEecCCCCcCC
Q 036498 121 CASINRIYGFY-------DECKRRF---SVRLWKHFTECFNCLPVAAVID-DKILCMHGGLSPEM 174 (294)
Q Consensus 121 ~~~~~~~~~~~-------~~~~~~~---~~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~~~~ 174 (294)
.++++...+.. .+....+ ..++.+...+|++.||+...++ ++++|||||+++..
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 98876432210 0111111 2456678899999999998765 46999999987643
No 24
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.93 E-value=3.3e-25 Score=200.41 Aligned_cols=218 Identities=17% Similarity=0.303 Sum_probs=138.8
Q ss_pred CeeEeeccccChhhHHHHHHhCCCC-CCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhch
Q 036498 52 PINICGDIHGQYPDLLRLFEYGGFP-PDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGF 130 (294)
Q Consensus 52 ~i~viGDIHG~~~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~ 130 (294)
+++||||||||+++|+++|+++++. ..+.++||||+|||||+|.+|++++.++ +.++++|+||||.+++...++.
T Consensus 2 ~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g~ 77 (275)
T PRK00166 2 ATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAGI 77 (275)
T ss_pred cEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcCC
Confidence 5899999999999999999999875 5678999999999999999999999876 3469999999999887655543
Q ss_pred HHH-----HhhccChHHHhHHhhhhccchheeee-cCceEEecCCCCcCCCChHH---HhcccCCCCCCCc-cceeeeec
Q 036498 131 YDE-----CKRRFSVRLWKHFTECFNCLPVAAVI-DDKILCMHGGLSPEMESLDQ---IRAIQRPIDVPDQ-GLLCDLLW 200 (294)
Q Consensus 131 ~~~-----~~~~~~~~~~~~~~~~~~~lP~~~~i-~~~~l~vHgGi~~~~~~~~~---i~~~~r~~~~~~~-~~~~~llW 200 (294)
... ..........+++.+|++++|+...+ ++++++||||++|.+...+. .++++..+..++. ..+..+.|
T Consensus 78 ~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~~my~ 157 (275)
T PRK00166 78 KRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLANMYG 157 (275)
T ss_pred ccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhcC
Confidence 211 11111223346688999999999886 45799999999998742111 1122222222221 23344444
Q ss_pred cCCCCCCCCCCcCCCcc-eeeeCHHHHH--HHHHh-----------------------------cCCceEeecceeeccC
Q 036498 201 SDPDRDIRGWGENDRGV-SYTFGADKVA--EFLNK-----------------------------QDLDLICRAHQVVEDG 248 (294)
Q Consensus 201 ~dp~~~~~~~~~~~rg~-~~~fg~~~~~--~fl~~-----------------------------~g~~~iIrgH~~~~~G 248 (294)
+.|. .|.++-.|. ...|.-+++. +|+.. ..-..||-||.+...|
T Consensus 158 ~~p~----~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~G 233 (275)
T PRK00166 158 NEPD----RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALEG 233 (275)
T ss_pred CCcC----ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccCC
Confidence 4442 233332221 1111111111 01111 1244799999998778
Q ss_pred ccccCCccEEEEeccCCCcccccCceeEEEecCce
Q 036498 249 FEFFADRRLVTIFSAPNYCGEFNNAGAFMCVDASL 283 (294)
Q Consensus 249 ~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~ 283 (294)
... ...++.+-|.--+ ++.=..+.++...
T Consensus 234 ~~~--~~~~~~LDtGcvw----gg~Lta~~l~~~~ 262 (275)
T PRK00166 234 LTT--PPNIIALDTGCVW----GGKLTALRLEDKQ 262 (275)
T ss_pred ccC--CCCeEEeeccccc----CCeEEEEEeCCCc
Confidence 754 4568888887654 2344455665444
No 25
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.92 E-value=3.9e-25 Score=194.25 Aligned_cols=177 Identities=21% Similarity=0.247 Sum_probs=117.3
Q ss_pred CCeeEeeccccChhhHHHHHHhCCCC-CCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhc
Q 036498 51 APINICGDIHGQYPDLLRLFEYGGFP-PDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYG 129 (294)
Q Consensus 51 ~~i~viGDIHG~~~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~ 129 (294)
++++||||||||+++|+++|+.+++. ..++++||||+|||||+|.+||+++.. .++++|+||||.++++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHHHHHHC
Confidence 58999999999999999999999886 567899999999999999999998854 24789999999998864321
Q ss_pred hHHHH--------hhcc---ChHHHhHHhhhhccchheeeec---CceEEecCCCCcCCCChHHHhcccCCCCCCCccce
Q 036498 130 FYDEC--------KRRF---SVRLWKHFTECFNCLPVAAVID---DKILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLL 195 (294)
Q Consensus 130 ~~~~~--------~~~~---~~~~~~~~~~~~~~lP~~~~i~---~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~ 195 (294)
-.... .... ..+.+..+.+|+++||+...+. +++++||||++.... +. ..+ ...
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~~--~~----~~~------~~~ 158 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADVY--EW----QKD------VDL 158 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCch--hh----hcc------CCc
Confidence 10000 0011 1234466778999999997653 469999999743211 10 000 012
Q ss_pred eeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecceeeccCccccCCccEEEEeccCCC
Q 036498 196 CDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFEFFADRRLVTIFSAPNY 266 (294)
Q Consensus 196 ~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y 266 (294)
.+++|.++... ..+. .+ ...|.+.+|.|||+.+.-. ..+..+.|-+..-|
T Consensus 159 ~~~~w~r~~~~-~~~~--~~---------------~~~~~~~vv~GHT~~~~~~---~~~~~i~IDtGav~ 208 (218)
T PRK11439 159 HQVLWSRSRLG-ERQK--GQ---------------GITGADHFWFGHTPLRHRV---DIGNLHYIDTGAVF 208 (218)
T ss_pred cceEEcChhhh-hccc--cc---------------cccCCCEEEECCccCCCcc---ccCCEEEEECCCCC
Confidence 46788765311 0000 00 1225567999999987432 22345667666544
No 26
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.92 E-value=2.6e-25 Score=199.19 Aligned_cols=119 Identities=25% Similarity=0.396 Sum_probs=96.9
Q ss_pred eeEeeccccChhhHHHHHHhCCCC-CCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchH
Q 036498 53 INICGDIHGQYPDLLRLFEYGGFP-PDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFY 131 (294)
Q Consensus 53 i~viGDIHG~~~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~ 131 (294)
++||||||||+++|+++|+++++. +.+.++|+||+|||||+|+||++++++++ .++++|+||||.+++...++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999886 57889999999999999999999998875 4799999999999877555432
Q ss_pred HHHhhc-----cChHHHhHHhhhhccchheeeecC-ceEEecCCCCcCCC
Q 036498 132 DECKRR-----FSVRLWKHFTECFNCLPVAAVIDD-KILCMHGGLSPEME 175 (294)
Q Consensus 132 ~~~~~~-----~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~~~~~ 175 (294)
...... ......+++.+|++++|+...+++ ++++||||++|.+.
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~ 126 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWS 126 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCC
Confidence 111111 112234678899999999998765 79999999999874
No 27
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.91 E-value=7.9e-25 Score=196.61 Aligned_cols=120 Identities=23% Similarity=0.370 Sum_probs=97.9
Q ss_pred CeeEeeccccChhhHHHHHHhCCCC-CCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhch
Q 036498 52 PINICGDIHGQYPDLLRLFEYGGFP-PDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGF 130 (294)
Q Consensus 52 ~i~viGDIHG~~~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~ 130 (294)
.++||||||||+++|+++|+++++. ..+.++|+||+|||||+|++||.++.++. .++++|+||||.+++...+|+
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g~ 77 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAGI 77 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcCC
Confidence 5899999999999999999999976 46789999999999999999999998764 457899999999988866654
Q ss_pred HH-----HHhhccChHHHhHHhhhhccchheeeecC-ceEEecCCCCcCCC
Q 036498 131 YD-----ECKRRFSVRLWKHFTECFNCLPVAAVIDD-KILCMHGGLSPEME 175 (294)
Q Consensus 131 ~~-----~~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~~~~~ 175 (294)
.. .....+.....+++.+|++++|+.....+ ++++||||++|.+.
T Consensus 78 ~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~ 128 (279)
T TIGR00668 78 SRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD 128 (279)
T ss_pred CccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc
Confidence 21 11111233455788999999999976543 69999999999884
No 28
>PHA02239 putative protein phosphatase
Probab=99.90 E-value=9.5e-24 Score=187.10 Aligned_cols=171 Identities=23% Similarity=0.303 Sum_probs=118.9
Q ss_pred CeeEeeccccChhhHHHHHHhCCCC--CCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhc
Q 036498 52 PINICGDIHGQYPDLLRLFEYGGFP--PDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYG 129 (294)
Q Consensus 52 ~i~viGDIHG~~~~l~~~l~~~~~~--~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~ 129 (294)
++++||||||+++.|.++++.+... +.+.+||+|||||||++|.+++..++.+.. .+.++++|+||||.++++...+
T Consensus 2 ~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~~ 80 (235)
T PHA02239 2 AIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIMEN 80 (235)
T ss_pred eEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHhC
Confidence 5899999999999999999987543 467899999999999999999999988653 4567999999999987643211
Q ss_pred ----------hH----HHHhhccC-------------------------------hHHHhHHhhhhccchheeeecCceE
Q 036498 130 ----------FY----DECKRRFS-------------------------------VRLWKHFTECFNCLPVAAVIDDKIL 164 (294)
Q Consensus 130 ----------~~----~~~~~~~~-------------------------------~~~~~~~~~~~~~lP~~~~i~~~~l 164 (294)
+. .+....|+ ...+..+..|+++||++...+ +++
T Consensus 81 ~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~~-~~i 159 (235)
T PHA02239 81 VDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKED-KYI 159 (235)
T ss_pred chhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEEC-CEE
Confidence 00 00111111 112345567999999998855 599
Q ss_pred EecCCCCcCCCChHHHhcccCCCCCCCccceeeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeeccee
Q 036498 165 CMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQV 244 (294)
Q Consensus 165 ~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~ 244 (294)
|||||+.|... +++ ....+++|.+. . .+.. .-+.||.||||
T Consensus 160 fVHAGi~p~~~-~~~-------------q~~~~llWiR~-f-----~~~~-------------------~g~~vV~GHTp 200 (235)
T PHA02239 160 FSHSGGVSWKP-VEE-------------QTIDQLIWSRD-F-----QPRK-------------------DGFTYVCGHTP 200 (235)
T ss_pred EEeCCCCCCCC-hhh-------------CCHhHeEEecc-c-----CCCC-------------------CCcEEEECCCC
Confidence 99999988643 221 11258899875 1 1111 12368999999
Q ss_pred eccCccccCCccEEEEeccC
Q 036498 245 VEDGFEFFADRRLVTIFSAP 264 (294)
Q Consensus 245 ~~~G~~~~~~~~vitifSa~ 264 (294)
+..+.... .++.|.|.+..
T Consensus 201 ~~~~~~~~-~~~~I~IDtGa 219 (235)
T PHA02239 201 TDSGEVEI-NGDMLMCDVGA 219 (235)
T ss_pred CCCCcccc-cCCEEEeecCc
Confidence 97654322 23467787765
No 29
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.90 E-value=2.3e-23 Score=181.61 Aligned_cols=167 Identities=24% Similarity=0.317 Sum_probs=113.9
Q ss_pred CCeeEeeccccChhhHHHHHHhCCCC-CCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhc
Q 036498 51 APINICGDIHGQYPDLLRLFEYGGFP-PDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYG 129 (294)
Q Consensus 51 ~~i~viGDIHG~~~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~ 129 (294)
++++||||||||+.+|+++++.+++. ..+.++++||++|||+++.++++++.. .++++|+||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47999999999999999999998875 467788999999999999999998864 35899999999998765433
Q ss_pred h--HHHHhhcc---------ChHHHhHHhhhhccchheeeec---CceEEecCCCCcCCCChHHHhcccCCCCCCCccce
Q 036498 130 F--YDECKRRF---------SVRLWKHFTECFNCLPVAAVID---DKILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLL 195 (294)
Q Consensus 130 ~--~~~~~~~~---------~~~~~~~~~~~~~~lP~~~~i~---~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~ 195 (294)
. ..+..... ..++++...+|+++||+...++ .++++||||+++... ...... ........
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~~-----~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVGA-----VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhhc-----cccCcccc
Confidence 1 11111111 1224566888999999998874 368999999865431 111100 11122334
Q ss_pred eeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecceeeccC
Q 036498 196 CDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDG 248 (294)
Q Consensus 196 ~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G 248 (294)
.+++|+++...... +...-+.+.||.|||+.+..
T Consensus 149 ~~~~w~~~~~~~~~-------------------~~~~~~~~~iV~GHTh~~~~ 182 (207)
T cd07424 149 EELLWSRTRIQKAQ-------------------TQPIKGVDAVVHGHTPVKRP 182 (207)
T ss_pred eeeeeccchhhhcC-------------------ccccCCCCEEEECCCCCCcc
Confidence 67889866421000 00111457799999998753
No 30
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.89 E-value=7.5e-23 Score=184.19 Aligned_cols=187 Identities=20% Similarity=0.311 Sum_probs=125.8
Q ss_pred CCeeEeeccccChhhHHHHHHhCCCC------CCCceeeeccccccccchHHHHHHHhhhhhcCCC-eEEEeccCccccc
Q 036498 51 APINICGDIHGQYPDLLRLFEYGGFP------PDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPD-NFFLLRGNHECAS 123 (294)
Q Consensus 51 ~~i~viGDIHG~~~~l~~~l~~~~~~------~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~-~v~~lrGNHE~~~ 123 (294)
.++++||||||+++.|+++|+.+... ..+.+|||||||||||+|.+|++++.+++..+|. ++++|+||||.++
T Consensus 2 ~~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 2 RVVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAF 81 (304)
T ss_pred ceEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHH
Confidence 36899999999999999999875422 2456999999999999999999999999887775 6899999999876
Q ss_pred chhhhc---------hH-----------HH-------------------------------------------HhhccC-
Q 036498 124 INRIYG---------FY-----------DE-------------------------------------------CKRRFS- 139 (294)
Q Consensus 124 ~~~~~~---------~~-----------~~-------------------------------------------~~~~~~- 139 (294)
+..... |. .+ ....|+
T Consensus 82 l~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv 161 (304)
T cd07421 82 AAFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGV 161 (304)
T ss_pred HhHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCC
Confidence 543211 00 00 001111
Q ss_pred --------hHHHhHHhhhhccchheeeecCce-------------EEecCCCCcCCCChHHHhccc-CCCCCCCccceee
Q 036498 140 --------VRLWKHFTECFNCLPVAAVIDDKI-------------LCMHGGLSPEMESLDQIRAIQ-RPIDVPDQGLLCD 197 (294)
Q Consensus 140 --------~~~~~~~~~~~~~lP~~~~i~~~~-------------l~vHgGi~~~~~~~~~i~~~~-r~~~~~~~~~~~~ 197 (294)
..+.+...+|++.||.....+ .+ +|||||+.|...--+|.+.+. +....|. .+
T Consensus 162 ~~~~~~l~~avP~~H~~fl~~l~~~~~~~-~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~----~~ 236 (304)
T cd07421 162 PHGSSDLIKAVPEEHKKFLRNLVWVHEED-DVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPK----IA 236 (304)
T ss_pred CcchHHHHHhCCHHHHHHHHhCCceEEeC-cccccccccccccceEEEEcccCCCCChHHhhhhhhcccccccc----cc
Confidence 122356789999999997744 35 999999999987667766543 2222222 38
Q ss_pred eeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecceeeccCccccCCccEEEEeccCCC
Q 036498 198 LLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFEFFADRRLVTIFSAPNY 266 (294)
Q Consensus 198 llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y 266 (294)
++|.+... |. .++.. ...-..||.||+. +....+.=|.|-+..-|
T Consensus 237 ~l~~R~~f----~~-~~~~~--------------~~~~~~VVhGHt~-----~~~~~~~Ri~iDtGa~~ 281 (304)
T cd07421 237 PLSGRKNV----WN-IPQEL--------------ADKKTIVVSGHHG-----KLHIDGLRLIIDEGGGF 281 (304)
T ss_pred ccccchhh----hc-Ccccc--------------cCCCeEEEECCCC-----CceecCCEEEEECCCCc
Confidence 88877641 11 11111 0012469999992 23444445667777755
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.87 E-value=1.3e-22 Score=178.34 Aligned_cols=115 Identities=24% Similarity=0.296 Sum_probs=86.1
Q ss_pred CCeeEeeccccChhhHHHHHHhCCCC-CCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhc
Q 036498 51 APINICGDIHGQYPDLLRLFEYGGFP-PDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYG 129 (294)
Q Consensus 51 ~~i~viGDIHG~~~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~ 129 (294)
+|++||||||||+++|+++|+.+.+. ..+.++|+||+|||||+|.+|++++.. .++++|+||||.++++....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 58999999999999999999998865 467888999999999999999998753 35889999999988764321
Q ss_pred hHHH--------HhhccCh---HHHhHHhhhhccchheeeec---CceEEecCCCC
Q 036498 130 FYDE--------CKRRFSV---RLWKHFTECFNCLPVAAVID---DKILCMHGGLS 171 (294)
Q Consensus 130 ~~~~--------~~~~~~~---~~~~~~~~~~~~lP~~~~i~---~~~l~vHgGi~ 171 (294)
-... ....... ........|+++||+...+. .++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 0000 0011111 12234466999999998763 36899999984
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.45 E-value=8.1e-13 Score=107.60 Aligned_cols=158 Identities=25% Similarity=0.296 Sum_probs=100.9
Q ss_pred CeeEeeccccChhhH----HHHHHhCCCCCCCceeeeccccccccchHHHHHHH--hhhhhcCCCeEEEeccCcccccch
Q 036498 52 PINICGDIHGQYPDL----LRLFEYGGFPPDSNYLFLGDYVDRGKQSIETICLL--LLYKIKYPDNFFLLRGNHECASIN 125 (294)
Q Consensus 52 ~i~viGDIHG~~~~l----~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l--~~l~~~~~~~v~~lrGNHE~~~~~ 125 (294)
+|++|||+|+..... ..+.......+.+.+|++||+++++..+.+..... .......+..+++++||||.....
T Consensus 2 ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~~ 81 (200)
T PF00149_consen 2 RILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSGN 81 (200)
T ss_dssp EEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHHH
T ss_pred eEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhccccccccccccccceec
Confidence 689999999999987 34444444456677889999999999887766543 344455677899999999998765
Q ss_pred hhhchHHHHhh----------------------------------ccChHHHhHHhhhhccchheeeecCceEEecCCCC
Q 036498 126 RIYGFYDECKR----------------------------------RFSVRLWKHFTECFNCLPVAAVIDDKILCMHGGLS 171 (294)
Q Consensus 126 ~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~ 171 (294)
........... ............+.............++++|.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~ 161 (200)
T PF00149_consen 82 SFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPY 161 (200)
T ss_dssp HHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSS
T ss_pred cccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCCC
Confidence 43222111110 00011112222333333333343457999999987
Q ss_pred cCCCChHHHhcccCCCCCCCccceeeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecceee
Q 036498 172 PEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVV 245 (294)
Q Consensus 172 ~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~ 245 (294)
+........ .......+.+..++++.++++++.||+..
T Consensus 162 ~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 162 SSSSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp TTSSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred Ccccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 654321111 13456678899999999999999999864
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.28 E-value=7.4e-11 Score=97.66 Aligned_cols=83 Identities=27% Similarity=0.340 Sum_probs=62.2
Q ss_pred CeeEeeccccChhhHHHHHHhCCCCCCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchH
Q 036498 52 PINICGDIHGQYPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFY 131 (294)
Q Consensus 52 ~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~ 131 (294)
++.++||+||+...+.++++.+.. .+.++++||++++++.+. +. ....++.++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~~--~~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------LE--LKAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------hh--cCCcEEEEeCCCCCcCC-------
Confidence 588999999999999999998654 678889999999998655 11 23459999999998632
Q ss_pred HHHhhccChHHHhHHhhhhccchheeee--cC-ceEEecCCCC
Q 036498 132 DECKRRFSVRLWKHFTECFNCLPVAAVI--DD-KILCMHGGLS 171 (294)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~lP~~~~i--~~-~~l~vHgGi~ 171 (294)
+..+|....+ ++ +++++||...
T Consensus 62 ------------------~~~~p~~~~~~~~g~~i~v~Hg~~~ 86 (155)
T cd00841 62 ------------------FPILPEEAVLEIGGKRIFLTHGHLY 86 (155)
T ss_pred ------------------cccCCceEEEEECCEEEEEECCccc
Confidence 2344544333 33 7999999754
No 34
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.27 E-value=3.3e-11 Score=99.16 Aligned_cols=135 Identities=23% Similarity=0.348 Sum_probs=83.8
Q ss_pred CeeEeeccccChhhHHHHHHhCCCCCCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchH
Q 036498 52 PINICGDIHGQYPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFY 131 (294)
Q Consensus 52 ~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~ 131 (294)
||+++||+|++..++.++++.+ ...+.++++||++++ .++++.+... .++.++||||.+......
T Consensus 2 ki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~--- 66 (156)
T PF12850_consen 2 KIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNEN--- 66 (156)
T ss_dssp EEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEE---
T ss_pred EEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhh---
Confidence 6899999999999999999988 346778899999993 6666666443 599999999965422111
Q ss_pred HHHhhccChHHHhHHhhhhccchheeeecCceEEecCCCCcCCCChHHHhcccCCCCCCCccceeeeeccCCCCCCCCCC
Q 036498 132 DECKRRFSVRLWKHFTECFNCLPVAAVIDDKILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRDIRGWG 211 (294)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~ 211 (294)
...+ +......... ..+++++||.+...
T Consensus 67 ---~~~~----------~~~~~~~~~~-~~~i~~~H~~~~~~-------------------------------------- 94 (156)
T PF12850_consen 67 ---DEEY----------LLDALRLTID-GFKILLSHGHPYDV-------------------------------------- 94 (156)
T ss_dssp ---CTCS----------SHSEEEEEET-TEEEEEESSTSSSS--------------------------------------
T ss_pred ---hccc----------cccceeeeec-CCeEEEECCCCccc--------------------------------------
Confidence 0000 2222222211 44799999965430
Q ss_pred cCCCcceeeeCHHHHHHHHHhcCCceEeecceeeccCccccCCccEEEEec
Q 036498 212 ENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFEFFADRRLVTIFS 262 (294)
Q Consensus 212 ~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~vitifS 262 (294)
..+.+.+.+.+...++++++.||+-.+.-.+ ..+..+++.=|
T Consensus 95 --------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs 136 (156)
T PF12850_consen 95 --------QWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGS 136 (156)
T ss_dssp --------TTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-G
T ss_pred --------ccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCc
Confidence 0233456677789999999999998754433 23334444333
No 35
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.20 E-value=1.7e-10 Score=93.58 Aligned_cols=118 Identities=19% Similarity=0.210 Sum_probs=79.0
Q ss_pred CeeEeeccccChhhHHHHHHhCCCCCCCceeeeccccccccchH--HHHHHHhhhhhcCCCeEEEeccCcccccchhhhc
Q 036498 52 PINICGDIHGQYPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSI--ETICLLLLYKIKYPDNFFLLRGNHECASINRIYG 129 (294)
Q Consensus 52 ~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~--evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~ 129 (294)
++.++||+||++. .....+.+.+|++||+++++.... +.+.++..+. ...+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~---~~~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP---HPHKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC---CCeEEEEECCCCCcCC-----
Confidence 5899999999987 122345677889999999886432 3344443332 2236789999996421
Q ss_pred hHHHHhhccChHHHhHHhhhhccchheeeecCceEEecCCCCcCCCChHHHhcccCCCCCCCccceeeeeccCCCCCCCC
Q 036498 130 FYDECKRRFSVRLWKHFTECFNCLPVAAVIDDKILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRDIRG 209 (294)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~ 209 (294)
.-+.+++++|+.+.+... ..+ +
T Consensus 66 ----------------------------~~~~~ilv~H~~p~~~~~----------------------~~~--~------ 87 (135)
T cd07379 66 ----------------------------PEDTDILVTHGPPYGHLD----------------------LVS--S------ 87 (135)
T ss_pred ----------------------------CCCCEEEEECCCCCcCcc----------------------ccc--c------
Confidence 113468999996432110 000 0
Q ss_pred CCcCCCcceeeeCHHHHHHHHHhcCCceEeecceeeccCcc
Q 036498 210 WGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFE 250 (294)
Q Consensus 210 ~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~ 250 (294)
....|.+.+.+++++.+.+.++.||+-.+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 124566788889999999999999999988876
No 36
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.20 E-value=2.4e-10 Score=95.19 Aligned_cols=62 Identities=18% Similarity=0.121 Sum_probs=48.2
Q ss_pred CeeEeeccccChhhHHHHHHhCCCC-CCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccc
Q 036498 52 PINICGDIHGQYPDLLRLFEYGGFP-PDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECA 122 (294)
Q Consensus 52 ~i~viGDIHG~~~~l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~ 122 (294)
++.++||+||+..+++.+++..... ..+.++++||++ +.+++..+..+. ..++.++||||..
T Consensus 2 ~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 2 KILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred EEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 6899999999998888777766554 567888999999 456666664432 3599999999984
No 37
>PRK09453 phosphodiesterase; Provisional
Probab=99.16 E-value=9.6e-11 Score=99.95 Aligned_cols=68 Identities=24% Similarity=0.352 Sum_probs=54.7
Q ss_pred CeeEeeccccChhhHHHHHHhCCCCCCCceeeeccccccccc--------hHHHHHHHhhhhhcCCCeEEEeccCccccc
Q 036498 52 PINICGDIHGQYPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQ--------SIETICLLLLYKIKYPDNFFLLRGNHECAS 123 (294)
Q Consensus 52 ~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~--------s~evl~~l~~l~~~~~~~v~~lrGNHE~~~ 123 (294)
++.++||+||++.+++++++.+...+.+.++++||++|+|++ +.++++.+..+ +..+++++||||...
T Consensus 2 ri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~~ 77 (182)
T PRK09453 2 KLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSEV 77 (182)
T ss_pred eEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcchh
Confidence 689999999999999999998755667889999999999873 45666655432 346999999999754
No 38
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.07 E-value=1.2e-09 Score=96.82 Aligned_cols=63 Identities=25% Similarity=0.353 Sum_probs=45.3
Q ss_pred CeeEeeccccChhhHH-HHHHhCCCCCCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccc
Q 036498 52 PINICGDIHGQYPDLL-RLFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASI 124 (294)
Q Consensus 52 ~i~viGDIHG~~~~l~-~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~ 124 (294)
+|+++|||||++.... +.++.. ..|.++++||+++. +.+++..+..+ +..+++++||||.+..
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~---~pD~Vl~~GDi~~~---~~~~~~~l~~l----~~p~~~V~GNHD~~~~ 65 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLL---QPDLVLFVGDFGNE---SVQLVRAISSL----PLPKAVILGNHDAWYD 65 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhcc---CCCEEEECCCCCcC---hHHHHHHHHhC----CCCeEEEcCCCccccc
Confidence 6899999999987642 334432 35788899999864 45666655443 3458999999998764
No 39
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.93 E-value=3.6e-08 Score=83.99 Aligned_cols=59 Identities=19% Similarity=0.262 Sum_probs=42.3
Q ss_pred CeeEeeccc-cChh-----hHHHHHHhCCCCCCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccc
Q 036498 52 PINICGDIH-GQYP-----DLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECA 122 (294)
Q Consensus 52 ~i~viGDIH-G~~~-----~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~ 122 (294)
.|.||||+| |... .+.++++. .+.+.++.+||+++ .++++++..+. .+++.|+||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 478999999 6544 35555544 34677889999986 66666664442 2589999999974
No 40
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.92 E-value=9.3e-09 Score=87.11 Aligned_cols=65 Identities=23% Similarity=0.231 Sum_probs=46.5
Q ss_pred eeEeeccccChhhHHHHHHhCCCCCCCceeeeccccccccch-HHHHHHHhhhhhcCCCeEEEeccCccccc
Q 036498 53 INICGDIHGQYPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQS-IETICLLLLYKIKYPDNFFLLRGNHECAS 123 (294)
Q Consensus 53 i~viGDIHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s-~evl~~l~~l~~~~~~~v~~lrGNHE~~~ 123 (294)
|.++||+||++..+.. ..+...+.|.+|++||++++|... .+.+..+. ..+..++++.||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~----~~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLL----AIGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHH----hcCCCEEEEcCCCCCHH
Confidence 5789999999999877 333334567788999999998753 33333332 23456999999999754
No 41
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.89 E-value=1.8e-08 Score=79.11 Aligned_cols=118 Identities=25% Similarity=0.350 Sum_probs=83.3
Q ss_pred eEeeccccChhhHHHHH--HhCCCCCCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchH
Q 036498 54 NICGDIHGQYPDLLRLF--EYGGFPPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFY 131 (294)
Q Consensus 54 ~viGDIHG~~~~l~~~l--~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~ 131 (294)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999999988765 33334456778899999999887766544322233345667999999999
Q ss_pred HHHhhccChHHHhHHhhhhccchheeeecCceEEecCCCCcCCCChHHHhcccCCCCCCCccceeeeeccCCCCCCCCCC
Q 036498 132 DECKRRFSVRLWKHFTECFNCLPVAAVIDDKILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRDIRGWG 211 (294)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~ 211 (294)
++++|..+.+...... +.
T Consensus 70 -------------------------------i~~~H~~~~~~~~~~~---------------------~~---------- 87 (131)
T cd00838 70 -------------------------------ILLTHGPPYDPLDELS---------------------PD---------- 87 (131)
T ss_pred -------------------------------EEEeccCCCCCchhhc---------------------cc----------
Confidence 8999998765432100 00
Q ss_pred cCCCcceeeeCHHHHHHHHHhcCCceEeecceeeccCccc
Q 036498 212 ENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFEF 251 (294)
Q Consensus 212 ~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~ 251 (294)
.......+...+...+.+.+|.||+.....+..
T Consensus 88 -------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~ 120 (131)
T cd00838 88 -------EDPGSEALLELLEKYGVDLVLSGHTHVYERREP 120 (131)
T ss_pred -------chhhHHHHHHHHHHhCCCEEEeCCeeccccccC
Confidence 000456788889999999999999998665543
No 42
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.81 E-value=3.3e-08 Score=88.06 Aligned_cols=212 Identities=15% Similarity=0.173 Sum_probs=105.8
Q ss_pred CeeEeeccccCh------hhHHHHHHhCCCCCCCceeeecccccc-------ccchHHHHHHHhhhhhcCCCeEEEeccC
Q 036498 52 PINICGDIHGQY------PDLLRLFEYGGFPPDSNYLFLGDYVDR-------GKQSIETICLLLLYKIKYPDNFFLLRGN 118 (294)
Q Consensus 52 ~i~viGDIHG~~------~~l~~~l~~~~~~~~~~~vfLGD~vDr-------G~~s~evl~~l~~l~~~~~~~v~~lrGN 118 (294)
++++|||+|... .+|.+.|+.. ....+.++++||++|. .+...+++.++..+.. .+..++++.||
T Consensus 2 ~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v~GN 79 (241)
T PRK05340 2 PTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFMHGN 79 (241)
T ss_pred cEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEEeCC
Confidence 689999999543 2344555432 1345778899999985 2334566777666652 23579999999
Q ss_pred cccccchhhhchHHHHhhccChHHHhHHhhhhccchheeeecC-ceEEecCCCCcCCC-ChHHHhcccCCCC------CC
Q 036498 119 HECASINRIYGFYDECKRRFSVRLWKHFTECFNCLPVAAVIDD-KILCMHGGLSPEME-SLDQIRAIQRPID------VP 190 (294)
Q Consensus 119 HE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~~~~~-~~~~i~~~~r~~~------~~ 190 (294)
||...... + .+..+. ..+.. |....+++ +++++||-..+... .....+++-|... ..
T Consensus 80 HD~~~~~~---~----~~~~g~-------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~~ 144 (241)
T PRK05340 80 RDFLLGKR---F----AKAAGM-------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWLFLAL 144 (241)
T ss_pred CchhhhHH---H----HHhCCC-------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHHHHhC
Confidence 99753210 1 011111 11111 22223343 69999998764221 1111222222100 00
Q ss_pred Cccceeee--eccCCCCCCCCCCcCC-Cc-ceeeeCHHHHHHHHHhcCCceEeecceeeccCccccCCccEEEEeccCCC
Q 036498 191 DQGLLCDL--LWSDPDRDIRGWGEND-RG-VSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFEFFADRRLVTIFSAPNY 266 (294)
Q Consensus 191 ~~~~~~~l--lW~dp~~~~~~~~~~~-rg-~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y 266 (294)
......++ -|+..+ -..+. +. .-....++++.+.+++.+++.+|.||+-.+.-.....++.-++-.+-+.+
T Consensus 145 p~~~~~~ia~~~~~~s-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lgdw 219 (241)
T PRK05340 145 PLSIRLRIAAKMRAKS-----KAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLGDW 219 (241)
T ss_pred CHHHHHHHHHHHHHHH-----HHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeCCC
Confidence 00000000 000000 00000 00 11233557788899999999999999987643333233211222222222
Q ss_pred cccccCceeEEEecCceeEEEEEe
Q 036498 267 CGEFNNAGAFMCVDASLLCSFQIL 290 (294)
Q Consensus 267 ~~~~~n~ga~l~i~~~~~~~~~~~ 290 (294)
...+.++.++.+. +.++.+
T Consensus 220 ----~~~~~~~~~~~~~-~~~~~~ 238 (241)
T PRK05340 220 ----HEQGSVLKVDADG-VELIPF 238 (241)
T ss_pred ----CCCCeEEEEECCc-eEEEeC
Confidence 2347778887764 444443
No 43
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.80 E-value=1.4e-08 Score=84.97 Aligned_cols=67 Identities=24% Similarity=0.251 Sum_probs=47.7
Q ss_pred eeEeeccccChhhHHHHH-HhCCCCCCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccc
Q 036498 53 INICGDIHGQYPDLLRLF-EYGGFPPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECA 122 (294)
Q Consensus 53 i~viGDIHG~~~~l~~~l-~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~ 122 (294)
+.++||+|++.......+ +.....+.+.++++||+++++.....+. ++. ....+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~--~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLL--ALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHH--hhcCCccEEEeCCCcceE
Confidence 578999999988876665 3333345567888999999887655443 221 223456799999999986
No 44
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.80 E-value=1e-08 Score=82.71 Aligned_cols=141 Identities=43% Similarity=0.693 Sum_probs=110.4
Q ss_pred hhhchHHHHhhccChH-HHhH---HhhhhccchheeeecC-ceEEecCCCCcCC-CChHHHhcccCCC--CCCCccceee
Q 036498 126 RIYGFYDECKRRFSVR-LWKH---FTECFNCLPVAAVIDD-KILCMHGGLSPEM-ESLDQIRAIQRPI--DVPDQGLLCD 197 (294)
Q Consensus 126 ~~~~~~~~~~~~~~~~-~~~~---~~~~~~~lP~~~~i~~-~~l~vHgGi~~~~-~~~~~i~~~~r~~--~~~~~~~~~~ 197 (294)
..+++..++...+... .|.. ..++++.+|+.+.... ..+|.|++++|.. ..+++++...|.. .....+....
T Consensus 5 ~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~~ 84 (155)
T COG0639 5 ALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHTHD 84 (155)
T ss_pred hhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccccc
Confidence 3445555555555443 4555 8999999999999888 8899999999865 6777777776654 4555566666
Q ss_pred eeccCCCCC-CCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecceeeccCccccCCccEEEEeccCCCc
Q 036498 198 LLWSDPDRD-IRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFEFFADRRLVTIFSAPNYC 267 (294)
Q Consensus 198 llW~dp~~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~ 267 (294)
.+|+++... ...|.++++|....| .+....|......+.+.++|.....++.....+..+|.||+++|+
T Consensus 85 ~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 85 LLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred ccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 699988863 678999999988777 777888998888777999999999999887776899999999886
No 45
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.77 E-value=7e-08 Score=77.84 Aligned_cols=107 Identities=17% Similarity=0.170 Sum_probs=73.8
Q ss_pred eEeeccccChhhHHHHHHhCCCCCCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHHH
Q 036498 54 NICGDIHGQYPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDE 133 (294)
Q Consensus 54 ~viGDIHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~ 133 (294)
.||||+||..+.+.++... ..+.+.++++||+. .+++..+..+ .+..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~---~~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTM---LNVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHH---cCCCEEEEeCCCc-------------
Confidence 4899999998888877665 35668899999974 2344444443 1234889999999
Q ss_pred HhhccChHHHhHHhhhhccchheeeecCceEEecCCCCcCCCChHHHhcccCCCCCCCccceeeeeccCCCCCCCCCCcC
Q 036498 134 CKRRFSVRLWKHFTECFNCLPVAAVIDDKILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRDIRGWGEN 213 (294)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~ 213 (294)
-+++++|+-+.+.... .+
T Consensus 57 ---------------------------~~Ilv~H~pp~~~~~~-------------------~~---------------- 74 (129)
T cd07403 57 ---------------------------VDILLTHAPPAGIGDG-------------------ED---------------- 74 (129)
T ss_pred ---------------------------cCEEEECCCCCcCcCc-------------------cc----------------
Confidence 3689999843211000 00
Q ss_pred CCcceeeeCHHHHHHHHHhcCCceEeecceeeccCcc
Q 036498 214 DRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFE 250 (294)
Q Consensus 214 ~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~ 250 (294)
...-|.+++.+++++.+.+.++.||+-.+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 011245678889999999999999999877665
No 46
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.77 E-value=1.2e-08 Score=89.91 Aligned_cols=71 Identities=10% Similarity=0.151 Sum_probs=57.1
Q ss_pred CCeeEeeccccChhhHHHHHHhCCCCCCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccc
Q 036498 51 APINICGDIHGQYPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECA 122 (294)
Q Consensus 51 ~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~ 122 (294)
.+|.++||+||++.+++++++.+.....+.+|++||++++|+..-++..++..+.. .+..++.++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~-l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGE-AHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHh-cCCceEEEcCCCChH
Confidence 57999999999999999999876545678899999999999766666666655542 234699999999985
No 47
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.63 E-value=3.1e-07 Score=81.63 Aligned_cols=68 Identities=21% Similarity=0.128 Sum_probs=49.1
Q ss_pred CeeEeeccccChh------hHHHHHHhCCCCCCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccc
Q 036498 52 PINICGDIHGQYP------DLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECA 122 (294)
Q Consensus 52 ~i~viGDIHG~~~------~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~ 122 (294)
+|+++||+|.++. .+.++++.+.-...+.+|+.||++++.+.+.+.+..+..+ .+..++.+.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 5889999997642 2556666554445677889999999877666666555442 345699999999975
No 48
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.61 E-value=6.1e-07 Score=73.08 Aligned_cols=118 Identities=23% Similarity=0.222 Sum_probs=74.8
Q ss_pred eeEeeccccChh------h----HHHHHHhCCCCCCCceeeeccccccccch--HHHHHHHhhhhhcCCCeEEEeccCcc
Q 036498 53 INICGDIHGQYP------D----LLRLFEYGGFPPDSNYLFLGDYVDRGKQS--IETICLLLLYKIKYPDNFFLLRGNHE 120 (294)
Q Consensus 53 i~viGDIHG~~~------~----l~~~l~~~~~~~~~~~vfLGD~vDrG~~s--~evl~~l~~l~~~~~~~v~~lrGNHE 120 (294)
|+.++|+|=... . |.++++.+.-...+.++++||+++.|... .+...++..+.... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 568999993221 1 12244444444567788999999998742 22233343333211 36999999999
Q ss_pred cccchhhhchHHHHhhccChHHHhHHhhhhccchheeeecCceEEecCCCCcCCCChHHHhcccCCCCCCCccceeeeec
Q 036498 121 CASINRIYGFYDECKRRFSVRLWKHFTECFNCLPVAAVIDDKILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLW 200 (294)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW 200 (294)
. ++++|.-+.+.... |
T Consensus 80 ~-----------------------------------------iv~~Hhp~~~~~~~-----------------------~ 95 (144)
T cd07400 80 V-----------------------------------------IVVLHHPLVPPPGS-----------------------G 95 (144)
T ss_pred E-----------------------------------------EEEecCCCCCCCcc-----------------------c
Confidence 7 88899866442110 0
Q ss_pred cCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecceeeccCccc
Q 036498 201 SDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFEF 251 (294)
Q Consensus 201 ~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~ 251 (294)
... .. +.+.+.+++++.+++.++.||+-.+..+..
T Consensus 96 ----------~~~-----~~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 96 ----------RER-----LL-DAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred ----------ccc-----CC-CHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 000 01 456788899999999999999998765543
No 49
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.59 E-value=1.6e-07 Score=83.23 Aligned_cols=205 Identities=16% Similarity=0.185 Sum_probs=98.4
Q ss_pred eeEeeccccCh------hhHHHHHHhCCCCCCCceeeeccccccc-----cc--hHHHHHHHhhhhhcCCCeEEEeccCc
Q 036498 53 INICGDIHGQY------PDLLRLFEYGGFPPDSNYLFLGDYVDRG-----KQ--SIETICLLLLYKIKYPDNFFLLRGNH 119 (294)
Q Consensus 53 i~viGDIHG~~------~~l~~~l~~~~~~~~~~~vfLGD~vDrG-----~~--s~evl~~l~~l~~~~~~~v~~lrGNH 119 (294)
++++||+|... ..+.+.+.... ...+.++++||++|.. +. ..++...+..+.. .+..++.+.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~-~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEA-RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 36899999643 23444444332 1457788899999952 11 2344555555542 245799999999
Q ss_pred ccccchhhhchHHHHhhccChHHHhHHhhhhccchheeee-cCceEEecCCCCcCCC-ChHHHhcccCC-C------CCC
Q 036498 120 ECASINRIYGFYDECKRRFSVRLWKHFTECFNCLPVAAVI-DDKILCMHGGLSPEME-SLDQIRAIQRP-I------DVP 190 (294)
Q Consensus 120 E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i-~~~~l~vHgGi~~~~~-~~~~i~~~~r~-~------~~~ 190 (294)
|...-.. + .+..+. ..+.. |....+ +.+++++||-.-..-. ...-.+.+.|. . ..+
T Consensus 79 D~~~~~~---~----~~~~gi-------~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l~ 143 (231)
T TIGR01854 79 DFLIGKR---F----AREAGM-------TLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHLP 143 (231)
T ss_pred chhhhHH---H----HHHCCC-------EEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhCC
Confidence 9742110 0 000010 11111 122222 4479999997653111 11111222111 0 000
Q ss_pred C--ccceeeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecceeeccCccccCCccEEEEeccCCCcc
Q 036498 191 D--QGLLCDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFEFFADRRLVTIFSAPNYCG 268 (294)
Q Consensus 191 ~--~~~~~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~ 268 (294)
. ...+...+++..... . ......-....+..+++.++..+++.+|.||+-.+.-.....++.-.+-.+-+.+.
T Consensus 144 ~~~r~~l~~~~~~~s~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW~- 218 (231)
T TIGR01854 144 LAVRVKLARKIRAESRAD-K---QMKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDWY- 218 (231)
T ss_pred HHHHHHHHHHHHHHHHHh-c---CCCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCCc-
Confidence 0 000111122211000 0 00000112335677888899999999999999876544433233222333333331
Q ss_pred cccCceeEEEecCc
Q 036498 269 EFNNAGAFMCVDAS 282 (294)
Q Consensus 269 ~~~n~ga~l~i~~~ 282 (294)
..+.++.++++
T Consensus 219 ---~~~~~~~~~~~ 229 (231)
T TIGR01854 219 ---RQGSILRVDAD 229 (231)
T ss_pred ---cCCeEEEEcCC
Confidence 23666666665
No 50
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.45 E-value=8.7e-06 Score=71.28 Aligned_cols=192 Identities=16% Similarity=0.111 Sum_probs=98.7
Q ss_pred CeeEeeccccC----hhhH----HHHHHhCCCCCCCceeeeccccccccchH--HHH-HHHhhhhhcCCCeEEEeccCcc
Q 036498 52 PINICGDIHGQ----YPDL----LRLFEYGGFPPDSNYLFLGDYVDRGKQSI--ETI-CLLLLYKIKYPDNFFLLRGNHE 120 (294)
Q Consensus 52 ~i~viGDIHG~----~~~l----~~~l~~~~~~~~~~~vfLGD~vDrG~~s~--evl-~~l~~l~~~~~~~v~~lrGNHE 120 (294)
+++++||+|-- ...+ ..+.+.+.-...+.+|++||+++.+.... +.+ ..+..+. ..+-.++.++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLD-KAGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHH-HcCCcEEEECCCCc
Confidence 57899999942 2223 33344443334567889999999987332 222 2222222 12345889999999
Q ss_pred cccchhhhchHHHHhhccChHHHhHHhhhhccchheeeecCceEEecCCCCcCCCChHHHhcccCCCCCCCccceeeeec
Q 036498 121 CASINRIYGFYDECKRRFSVRLWKHFTECFNCLPVAAVIDDKILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLW 200 (294)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW 200 (294)
..... ... ...+.++-+.+.++.-| -..-++++|-=+.+..... ....|
T Consensus 81 ~~~~l-d~~--------~~~~ql~WL~~~L~~~~----~~~~iv~~H~p~~~~~~~~------------------~~~~~ 129 (214)
T cd07399 81 LVLAL-EFG--------PRDEVLQWANEVLKKHP----DRPAILTTHAYLNCDDSRP------------------DSIDY 129 (214)
T ss_pred chhhC-CCC--------CCHHHHHHHHHHHHHCC----CCCEEEEecccccCCCCcC------------------ccccc
Confidence 43211 110 11222222222222211 0124788887543221100 00111
Q ss_pred cCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhc-CCceEeecceeeccCccc-----cCCccEEEEeccCCCcccccCce
Q 036498 201 SDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQ-DLDLICRAHQVVEDGFEF-----FADRRLVTIFSAPNYCGEFNNAG 274 (294)
Q Consensus 201 ~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~-g~~~iIrgH~~~~~G~~~-----~~~~~vitifSa~~y~~~~~n~g 274 (294)
|. ...-+.+.+.+.++++ ++++++.||.-.. +... ..++.|..+.+...... ++..|
T Consensus 130 ---------~~------~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~-~~g~~ 192 (214)
T cd07399 130 ---------DS------DVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEP-NGGNG 192 (214)
T ss_pred ---------cc------ccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCC-CCCcc
Confidence 10 1123445688889888 7999999997653 2221 12344666655442222 12233
Q ss_pred --eEEEecCce-eEEEEEecC
Q 036498 275 --AFMCVDASL-LCSFQILRP 292 (294)
Q Consensus 275 --a~l~i~~~~-~~~~~~~~~ 292 (294)
.++.++++. .+.++.|-|
T Consensus 193 ~~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 193 FLRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred eEEEEEEecCCCEEEEEeCCC
Confidence 366677774 788888766
No 51
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.43 E-value=6.4e-06 Score=69.68 Aligned_cols=118 Identities=15% Similarity=0.123 Sum_probs=79.3
Q ss_pred CCeeEeeccccChhhHHHHHHhCCCCCCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhch
Q 036498 51 APINICGDIHGQYPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGF 130 (294)
Q Consensus 51 ~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~ 130 (294)
.++.|+||.||...+..+..+.......+.+|.+||++...... .+..- ...+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~--~l~~~------~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLD--ALEGG------LAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchH--Hhhcc------cccceEEEEccCCCcccc-----
Confidence 46899999999997666666665556678888999999755422 11110 245799999999996432
Q ss_pred HHHHhhccChHHHhHHhhhhccchh--eeeec-CceEEecCCCCcCCCChHHHhcccCCCCCCCccceeeeeccCCCCCC
Q 036498 131 YDECKRRFSVRLWKHFTECFNCLPV--AAVID-DKILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRDI 207 (294)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~lP~--~~~i~-~~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~ 207 (294)
..+|. ...++ -+++++||.....
T Consensus 69 --------------------~~~p~~~~~~~~g~ki~l~HGh~~~~---------------------------------- 94 (172)
T COG0622 69 --------------------EELPEELVLEVGGVKIFLTHGHLYFV---------------------------------- 94 (172)
T ss_pred --------------------ccCChhHeEEECCEEEEEECCCcccc----------------------------------
Confidence 11222 22334 3899999964321
Q ss_pred CCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecceeecc
Q 036498 208 RGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVED 247 (294)
Q Consensus 208 ~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~ 247 (294)
......++...+..++|.+|.|||-.+.
T Consensus 95 ------------~~~~~~l~~la~~~~~Dvli~GHTH~p~ 122 (172)
T COG0622 95 ------------KTDLSLLEYLAKELGADVLIFGHTHKPV 122 (172)
T ss_pred ------------ccCHHHHHHHHHhcCCCEEEECCCCccc
Confidence 1123456777788899999999998763
No 52
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.42 E-value=4.5e-06 Score=75.46 Aligned_cols=73 Identities=19% Similarity=0.162 Sum_probs=49.2
Q ss_pred CeeEeeccc-cC------------hhhHHHHHHhCCCCCCCceeeeccccccccc-hHHHHHHHhhhhhcCCCeEEEecc
Q 036498 52 PINICGDIH-GQ------------YPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQ-SIETICLLLLYKIKYPDNFFLLRG 117 (294)
Q Consensus 52 ~i~viGDIH-G~------------~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~-s~evl~~l~~l~~~~~~~v~~lrG 117 (294)
++++|||+| +. ...+.++++.+.....+-+|++||+++.|.. +.+-+..+...-...+-.++.++|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 689999999 22 4566777777654456778899999998862 223333333322223456999999
Q ss_pred Ccccccc
Q 036498 118 NHECASI 124 (294)
Q Consensus 118 NHE~~~~ 124 (294)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9998644
No 53
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.32 E-value=7.3e-05 Score=65.13 Aligned_cols=211 Identities=17% Similarity=0.163 Sum_probs=120.3
Q ss_pred CCeeEeeccccChhhHHHHHHhCCCCCCCceeeecccc--ccccchHHHHHH--HhhhhhcCCCeEEEeccCcccccchh
Q 036498 51 APINICGDIHGQYPDLLRLFEYGGFPPDSNYLFLGDYV--DRGKQSIETICL--LLLYKIKYPDNFFLLRGNHECASINR 126 (294)
Q Consensus 51 ~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vfLGD~v--DrG~~s~evl~~--l~~l~~~~~~~v~~lrGNHE~~~~~~ 126 (294)
.++.+++|+||..+.+.++++.+.....+.+|+.||+. +.|+.-.. .+. +..++ .....++.++||.|...+..
T Consensus 4 mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~-~~~~~~e~l~-~~~~~v~avpGNcD~~~v~~ 81 (226)
T COG2129 4 MKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVA-EELNKLEALK-ELGIPVLAVPGNCDPPEVID 81 (226)
T ss_pred ceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHH-HhhhHHHHHH-hcCCeEEEEcCCCChHHHHH
Confidence 57899999999999999999988776778888999999 88873322 222 23333 23457999999999875532
Q ss_pred hhchHHHHhhccChHHHhHHhhhhccchheeeecCceEEecCCCCcCC------CChHHHhcccCCCCCCCccceeeeec
Q 036498 127 IYGFYDECKRRFSVRLWKHFTECFNCLPVAAVIDDKILCMHGGLSPEM------ESLDQIRAIQRPIDVPDQGLLCDLLW 200 (294)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~~------~~~~~i~~~~r~~~~~~~~~~~~llW 200 (294)
.. ...+..+ .+-...+++--++-=||..|.. .+.++|....+...........=++.
T Consensus 82 ~l-------~~~~~~v----------~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~~~Il~~ 144 (226)
T COG2129 82 VL-------KNAGVNV----------HGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNPVNILLT 144 (226)
T ss_pred HH-------Hhccccc----------ccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCcceEEEe
Confidence 11 0111100 1122233332233335544321 12333433322211111111111222
Q ss_pred cCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecceeeccCccccCCccEEEEeccCCCcccccCceeEEEec
Q 036498 201 SDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFEFFADRRLVTIFSAPNYCGEFNNAGAFMCVD 280 (294)
Q Consensus 201 ~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~ 280 (294)
--|.-..... ++.| -..-|.++++++.+..+-...++||=-...|+..-.+ ||+-.|.-.+ ...-|++.++
T Consensus 145 HaPP~gt~~d--~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~----TivVNPG~~~--~g~yA~i~l~ 215 (226)
T COG2129 145 HAPPYGTLLD--TPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN----TIVVNPGPLG--EGRYALIELE 215 (226)
T ss_pred cCCCCCcccc--CCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC----eEEECCCCcc--CceEEEEEec
Confidence 2222111111 2222 1345889999999999999999999888888876444 5666665444 3577888887
Q ss_pred CceeEEEEEe
Q 036498 281 ASLLCSFQIL 290 (294)
Q Consensus 281 ~~~~~~~~~~ 290 (294)
+. .+...+|
T Consensus 216 ~~-~Vk~~~~ 224 (226)
T COG2129 216 KE-VVKLEQF 224 (226)
T ss_pred Cc-EEEEEEe
Confidence 77 5554444
No 54
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.32 E-value=3.2e-06 Score=74.67 Aligned_cols=67 Identities=27% Similarity=0.273 Sum_probs=45.5
Q ss_pred CeeEeeccccC------------hhhHHHHHHhCCCC--CCCceeeeccccccccc-hHH-HHHHHhhhhhcCCCeEEEe
Q 036498 52 PINICGDIHGQ------------YPDLLRLFEYGGFP--PDSNYLFLGDYVDRGKQ-SIE-TICLLLLYKIKYPDNFFLL 115 (294)
Q Consensus 52 ~i~viGDIHG~------------~~~l~~~l~~~~~~--~~~~~vfLGD~vDrG~~-s~e-vl~~l~~l~~~~~~~v~~l 115 (294)
|++++||+|=. ...|+++++.+... +.+-+|++||+++.|.. ..+ ++..+.. .+..++.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~----~~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAA----LPIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhh----cCCCEEEe
Confidence 58999999944 33567777765443 56778899999998753 222 2233222 24569999
Q ss_pred ccCcccc
Q 036498 116 RGNHECA 122 (294)
Q Consensus 116 rGNHE~~ 122 (294)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 55
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.30 E-value=2.2e-05 Score=70.54 Aligned_cols=58 Identities=12% Similarity=0.044 Sum_probs=35.0
Q ss_pred HHHHHHHHhcCCceEeecceeeccCccccCCccEEEEeccCCCcccccCcee-EEEecCce
Q 036498 224 DKVAEFLNKQDLDLICRAHQVVEDGFEFFADRRLVTIFSAPNYCGEFNNAGA-FMCVDASL 283 (294)
Q Consensus 224 ~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga-~l~i~~~~ 283 (294)
+.+.+.+++.+++.++.||.-...... .++--..+-+|+.+.....+.|. ++.++++.
T Consensus 196 ~~l~~ll~~~~V~~v~~GH~H~~~~~~--~~g~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 254 (262)
T cd07395 196 KPLLDKFKKAGVKAVFSGHYHRNAGGR--YGGLEMVVTSAIGAQLGNDKSGLRIVKVTEDK 254 (262)
T ss_pred HHHHHHHHhcCceEEEECccccCCceE--ECCEEEEEcCceecccCCCCCCcEEEEECCCc
Confidence 457788899999999999999865533 23211112223333333344554 77777665
No 56
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.29 E-value=1.1e-06 Score=79.64 Aligned_cols=70 Identities=20% Similarity=0.058 Sum_probs=50.3
Q ss_pred CCeeEeeccccC----hhhHHHHHHhCCCCCCCceeeeccccccc--cchHHHHHHHhhhhhcCCCeEEEeccCcccc
Q 036498 51 APINICGDIHGQ----YPDLLRLFEYGGFPPDSNYLFLGDYVDRG--KQSIETICLLLLYKIKYPDNFFLLRGNHECA 122 (294)
Q Consensus 51 ~~i~viGDIHG~----~~~l~~~l~~~~~~~~~~~vfLGD~vDrG--~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~ 122 (294)
-+|+++||+|.. ...+.++++.+.-...+.++++||++|++ ....++...+..++. +..++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~--~~pv~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAE--CAPTFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhh--cCCEEEecCCCCcc
Confidence 369999999976 45577777766555667788999999953 233345555666653 34599999999975
No 57
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.27 E-value=1.2e-06 Score=76.41 Aligned_cols=72 Identities=26% Similarity=0.194 Sum_probs=52.6
Q ss_pred CCeeEeeccccChh----hHHHHHHhCCCCCCCceeeeccccccccchH-HHHHHHhhhhhcCCCeEEEeccCcccccc
Q 036498 51 APINICGDIHGQYP----DLLRLFEYGGFPPDSNYLFLGDYVDRGKQSI-ETICLLLLYKIKYPDNFFLLRGNHECASI 124 (294)
Q Consensus 51 ~~i~viGDIHG~~~----~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~-evl~~l~~l~~~~~~~v~~lrGNHE~~~~ 124 (294)
-+++++||+|.... .+.++++.+.....+.++++||++|.+.... ++..++..+. .+..++.+.||||....
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~~~ 78 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYYSG 78 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCcccccC
Confidence 36899999998754 6777777665555677888999999987664 4445444433 34569999999998643
No 58
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.21 E-value=9.6e-06 Score=69.96 Aligned_cols=70 Identities=14% Similarity=0.023 Sum_probs=43.4
Q ss_pred CCeeEeeccccChh------------hHHHHHHhCCCCCCCceeeeccccccccc---hHHHHHHHhhhhhcCCCeEEEe
Q 036498 51 APINICGDIHGQYP------------DLLRLFEYGGFPPDSNYLFLGDYVDRGKQ---SIETICLLLLYKIKYPDNFFLL 115 (294)
Q Consensus 51 ~~i~viGDIHG~~~------------~l~~~l~~~~~~~~~~~vfLGD~vDrG~~---s~evl~~l~~l~~~~~~~v~~l 115 (294)
-++++++|+|-... .+..+.+.+.....+.+|++||+++.+.. +.+.+..++......+-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 36899999995332 12222222223345778899999997664 3455554443333334568999
Q ss_pred ccCcc
Q 036498 116 RGNHE 120 (294)
Q Consensus 116 rGNHE 120 (294)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 59
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.18 E-value=2.9e-05 Score=68.81 Aligned_cols=45 Identities=4% Similarity=-0.022 Sum_probs=30.7
Q ss_pred CHHHHHHHHHhcCCceEeecceeeccCcccc---CCccEEEEeccCCCcc
Q 036498 222 GADKVAEFLNKQDLDLICRAHQVVEDGFEFF---ADRRLVTIFSAPNYCG 268 (294)
Q Consensus 222 g~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~---~~~~vitifSa~~y~~ 268 (294)
+.+.+.+.+++.++++++.||+-...-...+ .++ |+.+++|+-|.
T Consensus 181 ~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~g--i~~~~~~~~~~ 228 (232)
T cd07393 181 DDSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGG--IRYQLVSADYL 228 (232)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCCcccccccceECC--EEEEEEcchhc
Confidence 4456788888899999999999875443322 333 56777766554
No 60
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.15 E-value=1.2e-06 Score=76.28 Aligned_cols=27 Identities=15% Similarity=0.100 Sum_probs=21.7
Q ss_pred CHHHHHHHHHhcCCceEeecceeeccC
Q 036498 222 GADKVAEFLNKQDLDLICRAHQVVEDG 248 (294)
Q Consensus 222 g~~~~~~fl~~~g~~~iIrgH~~~~~G 248 (294)
.+..+.+.++..+++.+|.||+.++.-
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~ 203 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPAL 203 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCe
Confidence 345577778899999999999987643
No 61
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.15 E-value=0.0001 Score=66.89 Aligned_cols=70 Identities=16% Similarity=0.042 Sum_probs=45.7
Q ss_pred CCeeEeeccc-c-----------ChhhHHHHHHhCCC--CCCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEec
Q 036498 51 APINICGDIH-G-----------QYPDLLRLFEYGGF--PPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLR 116 (294)
Q Consensus 51 ~~i~viGDIH-G-----------~~~~l~~~l~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lr 116 (294)
-+++.|+|+| . ....|.++++.+.- +..+-+|+.||+++.|.. +-+..+...-...+..+++++
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~~--~~~~~~~~~l~~l~~Pv~~v~ 92 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHSS--EAYQHFAEGIAPLRKPCVWLP 92 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCCH--HHHHHHHHHHhhcCCcEEEeC
Confidence 4699999999 1 13567777776532 235678889999998742 222222222223345699999
Q ss_pred cCcccc
Q 036498 117 GNHECA 122 (294)
Q Consensus 117 GNHE~~ 122 (294)
||||..
T Consensus 93 GNHD~~ 98 (275)
T PRK11148 93 GNHDFQ 98 (275)
T ss_pred CCCCCh
Confidence 999973
No 62
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=98.02 E-value=1.4e-05 Score=67.42 Aligned_cols=58 Identities=21% Similarity=0.150 Sum_probs=34.3
Q ss_pred HHHHHHhCCCCCCCceeeeccccccccchH-HHHHHH-hhhhhcCCCeEEEeccCccccc
Q 036498 66 LLRLFEYGGFPPDSNYLFLGDYVDRGKQSI-ETICLL-LLYKIKYPDNFFLLRGNHECAS 123 (294)
Q Consensus 66 l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~-evl~~l-~~l~~~~~~~v~~lrGNHE~~~ 123 (294)
+.++.+.+...+.+.+|++||+++....+. +....+ .......+..+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 344444444445688999999998654222 111111 1112234457999999999864
No 63
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.94 E-value=0.00062 Score=61.29 Aligned_cols=73 Identities=21% Similarity=0.276 Sum_probs=51.5
Q ss_pred CeeEeeccccC------hhhHHHHHHhCCCCCCCceeeecccccccc-chHHHHHHHhhhhhcCCCeEEEeccCcccccc
Q 036498 52 PINICGDIHGQ------YPDLLRLFEYGGFPPDSNYLFLGDYVDRGK-QSIETICLLLLYKIKYPDNFFLLRGNHECASI 124 (294)
Q Consensus 52 ~i~viGDIHG~------~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~-~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~ 124 (294)
+++.|+|+|-. ...+.++++.+...+.|.+|+.||+.+.|. .+.+-+..++. +...+..+++++||||.+..
T Consensus 2 ~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~~~~~~~~~~~l~-~~~~~~~~~~vpGNHD~~~~ 80 (301)
T COG1409 2 RIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGEPEEYRRLKELLA-RLELPAPVIVVPGNHDARVV 80 (301)
T ss_pred eEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCCHHHHHHHHHHHh-hccCCCceEeeCCCCcCCch
Confidence 68899999976 345566677777666688999999999964 22222222221 23567789999999999876
Q ss_pred h
Q 036498 125 N 125 (294)
Q Consensus 125 ~ 125 (294)
+
T Consensus 81 ~ 81 (301)
T COG1409 81 N 81 (301)
T ss_pred H
Confidence 5
No 64
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.91 E-value=1.7e-05 Score=69.69 Aligned_cols=202 Identities=17% Similarity=0.223 Sum_probs=101.3
Q ss_pred eEeeccccC------hhhHHHHHHhCCCCCCCceeeecccccc--ccc-----hHHHHHHHhhhhhcCCCeEEEeccCcc
Q 036498 54 NICGDIHGQ------YPDLLRLFEYGGFPPDSNYLFLGDYVDR--GKQ-----SIETICLLLLYKIKYPDNFFLLRGNHE 120 (294)
Q Consensus 54 ~viGDIHG~------~~~l~~~l~~~~~~~~~~~vfLGD~vDr--G~~-----s~evl~~l~~l~~~~~~~v~~lrGNHE 120 (294)
++|||+|=. .+.|.+.|+... +..+.+.++||++|- |.+ -.+|...+..+ ...+.+++.+.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCchH
Confidence 368999933 233444555432 245678889999973 322 23444444333 235678999999999
Q ss_pred cccchhhhchHHHHhhccChHHHhHHhhhhccchheeee---cCceEEecCCCCcCCC-C-----------hHHHhcccC
Q 036498 121 CASINRIYGFYDECKRRFSVRLWKHFTECFNCLPVAAVI---DDKILCMHGGLSPEME-S-----------LDQIRAIQR 185 (294)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i---~~~~l~vHgGi~~~~~-~-----------~~~i~~~~r 185 (294)
..+-+ .++ .+ ..-+.-+|-...+ +.+++++||-.--... . +.+..-+..
T Consensus 79 fll~~-~f~--~~-------------~g~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lflnl 142 (237)
T COG2908 79 FLLGK-RFA--QE-------------AGGMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLNL 142 (237)
T ss_pred HHHHH-HHH--hh-------------cCceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHHh
Confidence 54322 110 00 0112223333322 5689999996532110 0 000000111
Q ss_pred CCCCCCccceeeeeccCCCCCCCCCCcCCCccee---eeCHHHHHHHHHhcCCceEeecceeeccCccccCCccEEEEec
Q 036498 186 PIDVPDQGLLCDLLWSDPDRDIRGWGENDRGVSY---TFGADKVAEFLNKQDLDLICRAHQVVEDGFEFFADRRLVTIFS 262 (294)
Q Consensus 186 ~~~~~~~~~~~~llW~dp~~~~~~~~~~~rg~~~---~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~vitifS 262 (294)
|+. -. .-+-.-+|+.- .|......... ...++++.+-+++.|++.+|+||+-.+..-....- .-|-
T Consensus 143 ~l~-~R-~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~-~yi~--- 211 (237)
T COG2908 143 PLR-VR-RRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGI-TYIN--- 211 (237)
T ss_pred HHH-HH-HHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCc-eEEe---
Confidence 100 00 00011123222 12222111111 23556677889999999999999998766544321 1111
Q ss_pred cCCCcccccCceeEEEecCceeEEEE
Q 036498 263 APNYCGEFNNAGAFMCVDASLLCSFQ 288 (294)
Q Consensus 263 a~~y~~~~~n~ga~l~i~~~~~~~~~ 288 (294)
+|.....|++++++.+...-++
T Consensus 212 ----lGdW~~~~s~~~v~~~~~~~~~ 233 (237)
T COG2908 212 ----LGDWVSEGSILEVDDGGLELIQ 233 (237)
T ss_pred ----cCcchhcceEEEEecCcEEEee
Confidence 1222357888888887754443
No 65
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.91 E-value=6.4e-05 Score=67.62 Aligned_cols=72 Identities=19% Similarity=0.147 Sum_probs=42.8
Q ss_pred eeEeeccccChh------hH-HHHHHhCCCCCCCceeeeccccccccch--------H---HHHHHHhhhhhcCCCeEEE
Q 036498 53 INICGDIHGQYP------DL-LRLFEYGGFPPDSNYLFLGDYVDRGKQS--------I---ETICLLLLYKIKYPDNFFL 114 (294)
Q Consensus 53 i~viGDIHG~~~------~l-~~~l~~~~~~~~~~~vfLGD~vDrG~~s--------~---evl~~l~~l~~~~~~~v~~ 114 (294)
++.++|+|-... .. ..+++.+.....+.+|++||++|+.... . +.+..+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 578999995322 11 2344444444567788999999976421 1 2122222222223567999
Q ss_pred eccCcccccc
Q 036498 115 LRGNHECASI 124 (294)
Q Consensus 115 lrGNHE~~~~ 124 (294)
++||||.+..
T Consensus 82 v~GNHD~~~~ 91 (256)
T cd07401 82 IRGNHDLFNI 91 (256)
T ss_pred eCCCCCcCCC
Confidence 9999999643
No 66
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=97.88 E-value=7.5e-05 Score=73.58 Aligned_cols=69 Identities=25% Similarity=0.278 Sum_probs=47.8
Q ss_pred CHHHHHHHHHhcCCc----eEeecceeec--cCccc-cCCccEEEE---eccCCCcccccCceeEEEecCceeEEEEEec
Q 036498 222 GADKVAEFLNKQDLD----LICRAHQVVE--DGFEF-FADRRLVTI---FSAPNYCGEFNNAGAFMCVDASLLCSFQILR 291 (294)
Q Consensus 222 g~~~~~~fl~~~g~~----~iIrgH~~~~--~G~~~-~~~~~viti---fSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~ 291 (294)
.++..+..|+..|++ .||-||+|+. .|-.+ .++||++.| ||.+ |....+=+|=-| |..+....+..=+
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~TGIAGYTL-iyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTTGIAGYTL-IYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hccccCccceEE-EecCCcceeccCC
Confidence 456678899999999 9999999986 66554 588999999 5655 766545455555 4444444443333
Q ss_pred C
Q 036498 292 P 292 (294)
Q Consensus 292 ~ 292 (294)
|
T Consensus 585 p 585 (640)
T PF06874_consen 585 P 585 (640)
T ss_pred C
Confidence 3
No 67
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.86 E-value=2.3e-05 Score=70.42 Aligned_cols=71 Identities=23% Similarity=0.233 Sum_probs=47.3
Q ss_pred CeeEeecccc-C-----------hhhHHHHHHhCCCCCCCceeeeccccccccchHHHH----HHHhhhhhcCCCeEEEe
Q 036498 52 PINICGDIHG-Q-----------YPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETI----CLLLLYKIKYPDNFFLL 115 (294)
Q Consensus 52 ~i~viGDIHG-~-----------~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl----~~l~~l~~~~~~~v~~l 115 (294)
+++.++|+|- . ...|.++++.+.-...+.+++.||++|+...+.+.. .++..++...+-.++++
T Consensus 2 kilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~i 81 (253)
T TIGR00619 2 RILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVVI 81 (253)
T ss_pred EEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 6889999993 2 234555555554445677889999999875444332 33444443333579999
Q ss_pred ccCcccc
Q 036498 116 RGNHECA 122 (294)
Q Consensus 116 rGNHE~~ 122 (294)
.||||..
T Consensus 82 ~GNHD~~ 88 (253)
T TIGR00619 82 SGNHDSA 88 (253)
T ss_pred ccCCCCh
Confidence 9999985
No 68
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.85 E-value=0.00013 Score=60.67 Aligned_cols=47 Identities=23% Similarity=0.201 Sum_probs=29.1
Q ss_pred CCCceeeeccccccccchH-H----HHHHHhhhhhcC-CCeEEEeccCccccc
Q 036498 77 PDSNYLFLGDYVDRGKQSI-E----TICLLLLYKIKY-PDNFFLLRGNHECAS 123 (294)
Q Consensus 77 ~~~~~vfLGD~vDrG~~s~-e----vl~~l~~l~~~~-~~~v~~lrGNHE~~~ 123 (294)
..+.+|++||++|.+.... + .+..+..+.... +..++++.||||...
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred CCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 4578899999999876321 2 122222221111 346999999999853
No 69
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.84 E-value=3.1e-05 Score=76.30 Aligned_cols=112 Identities=18% Similarity=0.233 Sum_probs=60.5
Q ss_pred CCeeEeeccc-cCh----hhHHHHHHhCC---------CCCCCceeeecccccc-ccch---------------HHHHHH
Q 036498 51 APINICGDIH-GQY----PDLLRLFEYGG---------FPPDSNYLFLGDYVDR-GKQS---------------IETICL 100 (294)
Q Consensus 51 ~~i~viGDIH-G~~----~~l~~~l~~~~---------~~~~~~~vfLGD~vDr-G~~s---------------~evl~~ 100 (294)
.++++|||+| |.. ..+..+++.+. ....+.+|++||++|. |+.+ .++..+
T Consensus 244 ~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~ 323 (504)
T PRK04036 244 VYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEY 323 (504)
T ss_pred cEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHH
Confidence 4689999999 653 23444444332 1234678899999994 3211 133344
Q ss_pred HhhhhhcCCCeEEEeccCcccccchhhhc-hHHHHhhccChHHHh-HHhhhhccchheeeecC-ceEEecCCC
Q 036498 101 LLLYKIKYPDNFFLLRGNHECASINRIYG-FYDECKRRFSVRLWK-HFTECFNCLPVAAVIDD-KILCMHGGL 170 (294)
Q Consensus 101 l~~l~~~~~~~v~~lrGNHE~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~lP~~~~i~~-~~l~vHgGi 170 (294)
+..+. ..-.+++++||||......... +... + ...+. .-..++.. |....+++ +++++||-.
T Consensus 324 L~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~----l-~~~l~~~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 324 LKQIP--EDIKIIISPGNHDAVRQAEPQPAFPEE----I-RSLFPEHNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHhhh--cCCeEEEecCCCcchhhccCCCCccHH----H-HHhcCcCCeEEecC-CeEEEECCEEEEEECCCC
Confidence 44443 3346999999999864321110 1111 1 01111 12234444 65555554 789999964
No 70
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.76 E-value=3.7e-05 Score=72.07 Aligned_cols=72 Identities=22% Similarity=0.270 Sum_probs=47.7
Q ss_pred CeeEeeccc-cC-----------hhhHHHHHHhCCCCCCCceeeeccccccc-cchHHHHHHHhh--h--hhcCCCeEEE
Q 036498 52 PINICGDIH-GQ-----------YPDLLRLFEYGGFPPDSNYLFLGDYVDRG-KQSIETICLLLL--Y--KIKYPDNFFL 114 (294)
Q Consensus 52 ~i~viGDIH-G~-----------~~~l~~~l~~~~~~~~~~~vfLGD~vDrG-~~s~evl~~l~~--l--~~~~~~~v~~ 114 (294)
|++.+||+| |. ...|.++++.+.-...+.+++.||++|+. +.+.+++.++.. + ....+-.+++
T Consensus 2 KilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~ 81 (340)
T PHA02546 2 KILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLHV 81 (340)
T ss_pred eEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 688999999 42 23455565555555667888999999985 444444444433 1 1123457999
Q ss_pred eccCccccc
Q 036498 115 LRGNHECAS 123 (294)
Q Consensus 115 lrGNHE~~~ 123 (294)
|.||||...
T Consensus 82 I~GNHD~~~ 90 (340)
T PHA02546 82 LVGNHDMYY 90 (340)
T ss_pred EccCCCccc
Confidence 999999843
No 71
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.74 E-value=4.2e-05 Score=66.42 Aligned_cols=74 Identities=23% Similarity=0.212 Sum_probs=48.6
Q ss_pred CeeEeeccc-cCh--------------hhHHHHHHhCCCCCCCceeeeccccccccchHHHHHHHhhhhhc---CCCeEE
Q 036498 52 PINICGDIH-GQY--------------PDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLLLYKIK---YPDNFF 113 (294)
Q Consensus 52 ~i~viGDIH-G~~--------------~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~---~~~~v~ 113 (294)
+++.++|+| |.. ..|.++++.+.....+.+|++||+++....+.+.+..+...... .+..++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 588999999 432 23666776665556677889999999876444433333222111 244699
Q ss_pred EeccCcccccch
Q 036498 114 LLRGNHECASIN 125 (294)
Q Consensus 114 ~lrGNHE~~~~~ 125 (294)
++.||||.....
T Consensus 81 ~~~GNHD~~~~~ 92 (223)
T cd00840 81 IIAGNHDSPSRL 92 (223)
T ss_pred EecCCCCCcccc
Confidence 999999986543
No 72
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.72 E-value=0.00014 Score=66.24 Aligned_cols=70 Identities=16% Similarity=0.095 Sum_probs=41.0
Q ss_pred CCeeEeeccccC----hhhHHHHHHhCCCCCCCceeeeccccccccch-----HHHHHHHhhhhhcCCCeEEEeccCccc
Q 036498 51 APINICGDIHGQ----YPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQS-----IETICLLLLYKIKYPDNFFLLRGNHEC 121 (294)
Q Consensus 51 ~~i~viGDIHG~----~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~~~~~~~v~~lrGNHE~ 121 (294)
-+++|+||.|.. .+.+.++.+. ....+-+|++||+++.+... -..+..+..+. ..-.++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLA--SYVPYMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHH--hcCCcEEcCccccc
Confidence 468999999963 3333333332 23456677899999644321 12222222222 23358999999998
Q ss_pred ccc
Q 036498 122 ASI 124 (294)
Q Consensus 122 ~~~ 124 (294)
...
T Consensus 81 ~~~ 83 (294)
T cd00839 81 DYN 83 (294)
T ss_pred ccC
Confidence 643
No 73
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.66 E-value=8.5e-05 Score=67.10 Aligned_cols=70 Identities=20% Similarity=0.294 Sum_probs=45.0
Q ss_pred eeEeeccccChhhHHHHHHh---CCCCCCCceeeecccccccc-chHHHH----------HHHhhh--hhcCCCeEEEec
Q 036498 53 INICGDIHGQYPDLLRLFEY---GGFPPDSNYLFLGDYVDRGK-QSIETI----------CLLLLY--KIKYPDNFFLLR 116 (294)
Q Consensus 53 i~viGDIHG~~~~l~~~l~~---~~~~~~~~~vfLGD~vDrG~-~s~evl----------~~l~~l--~~~~~~~v~~lr 116 (294)
|+|+||+||+++.+.+.++. ....+.+-+|++||+-..+. ...+.+ ++...+ ....|-.+++|.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 68999999999998765443 22345677889999975443 222221 121111 223566689999
Q ss_pred cCcccc
Q 036498 117 GNHECA 122 (294)
Q Consensus 117 GNHE~~ 122 (294)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999974
No 74
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.54 E-value=0.00014 Score=61.21 Aligned_cols=67 Identities=27% Similarity=0.348 Sum_probs=43.3
Q ss_pred eeEeeccccChhhH---------------HHHHHhCC--CCCCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEe
Q 036498 53 INICGDIHGQYPDL---------------LRLFEYGG--FPPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLL 115 (294)
Q Consensus 53 i~viGDIHG~~~~l---------------~~~l~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~l 115 (294)
+++|||+|=....- .++++.+. ..+.+.+|++||+++++..+.. +.++..+ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 47899999554432 22333221 2345789999999999986543 4444332 3469999
Q ss_pred ccCcccccc
Q 036498 116 RGNHECASI 124 (294)
Q Consensus 116 rGNHE~~~~ 124 (294)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999998644
No 75
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.54 E-value=0.00019 Score=63.42 Aligned_cols=69 Identities=17% Similarity=0.167 Sum_probs=43.6
Q ss_pred CCeeEeeccc-cChhh----------------HHHHHHhCCCCCCCceeeeccccccccc---hHHHHHHHhhhhhcCCC
Q 036498 51 APINICGDIH-GQYPD----------------LLRLFEYGGFPPDSNYLFLGDYVDRGKQ---SIETICLLLLYKIKYPD 110 (294)
Q Consensus 51 ~~i~viGDIH-G~~~~----------------l~~~l~~~~~~~~~~~vfLGD~vDrG~~---s~evl~~l~~l~~~~~~ 110 (294)
.++.||+|+| |--.. |.++.+.+.....+.+|++||+.+.... ..++.+++..+ ..
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----FR 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----CC
Confidence 6799999999 53222 2333333333446789999999975543 22333333332 24
Q ss_pred eEEEeccCccccc
Q 036498 111 NFFLLRGNHECAS 123 (294)
Q Consensus 111 ~v~~lrGNHE~~~ 123 (294)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999764
No 76
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.42 E-value=0.00024 Score=68.06 Aligned_cols=73 Identities=19% Similarity=0.179 Sum_probs=54.6
Q ss_pred CCeeEeeccccC------------hhhHHHHHHhCCCCCCCceeeeccccccccchHHHHHHHhhhhhc-----------
Q 036498 51 APINICGDIHGQ------------YPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLLLYKIK----------- 107 (294)
Q Consensus 51 ~~i~viGDIHG~------------~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~----------- 107 (294)
-+|.+++|+|-. +.+|.++++.+.-...|-+|+.||++|+..-|.+++..++.+-.+
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~~ 83 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCELE 83 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccchh
Confidence 478999999943 457788888876666777888999999998887776554332211
Q ss_pred -------------------------CCCeEEEeccCccccc
Q 036498 108 -------------------------YPDNFFLLRGNHECAS 123 (294)
Q Consensus 108 -------------------------~~~~v~~lrGNHE~~~ 123 (294)
..-.|+.|-||||...
T Consensus 84 ~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 84 FLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1337999999999964
No 77
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.22 E-value=0.00048 Score=66.11 Aligned_cols=71 Identities=23% Similarity=0.268 Sum_probs=45.4
Q ss_pred CeeEeeccc-cC-h------hh----HHHHHHhCCCCCCCceeeeccccccccchHHHH----HHHhhhhhcCCCeEEEe
Q 036498 52 PINICGDIH-GQ-Y------PD----LLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETI----CLLLLYKIKYPDNFFLL 115 (294)
Q Consensus 52 ~i~viGDIH-G~-~------~~----l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl----~~l~~l~~~~~~~v~~l 115 (294)
+++.++|+| |. + .+ +..+.+.+.-...+.+|+.||++|++..+.... .++..++. .+-.++++
T Consensus 2 kilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~~I 80 (407)
T PRK10966 2 RILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLVVL 80 (407)
T ss_pred EEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEEEE
Confidence 688999999 42 1 11 334445444456778889999999975443322 23334432 23469999
Q ss_pred ccCccccc
Q 036498 116 RGNHECAS 123 (294)
Q Consensus 116 rGNHE~~~ 123 (294)
.||||...
T Consensus 81 ~GNHD~~~ 88 (407)
T PRK10966 81 AGNHDSVA 88 (407)
T ss_pred cCCCCChh
Confidence 99999853
No 78
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.15 E-value=0.00071 Score=60.23 Aligned_cols=68 Identities=16% Similarity=0.178 Sum_probs=38.5
Q ss_pred eEeeccc--cCh---hhHHHHHHhCCCC-----CCCceeeecccccccc-----c----------h-HHHHHHHhhhhhc
Q 036498 54 NICGDIH--GQY---PDLLRLFEYGGFP-----PDSNYLFLGDYVDRGK-----Q----------S-IETICLLLLYKIK 107 (294)
Q Consensus 54 ~viGDIH--G~~---~~l~~~l~~~~~~-----~~~~~vfLGD~vDrG~-----~----------s-~evl~~l~~l~~~ 107 (294)
++|||+| +.. ..++.+++.+.-. ..+.+|++||++|+.. . . .++..++..+.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 6899999 321 2223333332211 2367888999999731 0 0 11222333332
Q ss_pred CCCeEEEeccCccccc
Q 036498 108 YPDNFFLLRGNHECAS 123 (294)
Q Consensus 108 ~~~~v~~lrGNHE~~~ 123 (294)
..-.++++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 2457999999999854
No 79
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.12 E-value=0.00079 Score=61.55 Aligned_cols=73 Identities=23% Similarity=0.181 Sum_probs=49.7
Q ss_pred CCeeEeeccccChhh--HHHHHHhCCCCCCCceeeecccccc-c-cchHHHHHHHhhhhhcCCCeEEEeccCcccccch
Q 036498 51 APINICGDIHGQYPD--LLRLFEYGGFPPDSNYLFLGDYVDR-G-KQSIETICLLLLYKIKYPDNFFLLRGNHECASIN 125 (294)
Q Consensus 51 ~~i~viGDIHG~~~~--l~~~l~~~~~~~~~~~vfLGD~vDr-G-~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~ 125 (294)
.+|+.++|+|-+... ..+.+........|-+++.||++|+ . +....+...+..|+ .|-.++.+.||||...-.
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~--~~~gv~av~GNHd~~~~~ 121 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLK--APLGVFAVLGNHDYGVDR 121 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhh--ccCCEEEEeccccccccc
Confidence 369999999987555 2233333333333777889999995 4 44555556666555 566799999999986543
No 80
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=96.90 E-value=0.0036 Score=60.24 Aligned_cols=209 Identities=19% Similarity=0.193 Sum_probs=106.2
Q ss_pred CeeEeeccc-cChhhHHHH----HHhCCCC----CCCcee-eecccccc-c-----------cchHHHHHHHhhhhhcCC
Q 036498 52 PINICGDIH-GQYPDLLRL----FEYGGFP----PDSNYL-FLGDYVDR-G-----------KQSIETICLLLLYKIKYP 109 (294)
Q Consensus 52 ~i~viGDIH-G~~~~l~~~----l~~~~~~----~~~~~v-fLGD~vDr-G-----------~~s~evl~~l~~l~~~~~ 109 (294)
.+++++|+| |...-++.. ++-++-+ +..+|+ ..||.||. | .+..+-.+.+..+-.+-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 478999999 443333332 2322222 233455 57999994 2 122233334433333445
Q ss_pred C--eEEEeccCcccccchhhhchHHHHhhccChHHHhHHhhhhccchheeeecC-ceEEecCCCCcCCCChHHHhcccCC
Q 036498 110 D--NFFLLRGNHECASINRIYGFYDECKRRFSVRLWKHFTECFNCLPVAAVIDD-KILCMHGGLSPEMESLDQIRAIQRP 186 (294)
Q Consensus 110 ~--~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~~~~~~~~~i~~~~r~ 186 (294)
+ .+++.+||||..-.........+ +...++...+-.+-+-|....+++ .++..|| .+++++...-..
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~----~~kslf~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidDii~~vP~ 376 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPE----LIKSLFSLNNLLFVSNPALVSLHGVDVLIYHG------RSIDDIIKLVPG 376 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcch----hhcccccccceEecCCCcEEEECCEEEEEecC------CCHHHHHhhCCC
Confidence 5 58999999999654322221111 122233333333445577767666 6888898 466665544333
Q ss_pred CCCCCc-cce-eeeeccCCCCCCCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecceeeccCccccCCccEEEEeccC
Q 036498 187 IDVPDQ-GLL-CDLLWSDPDRDIRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFEFFADRRLVTIFSAP 264 (294)
Q Consensus 187 ~~~~~~-~~~-~~llW~dp~~~~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~vitifSa~ 264 (294)
.+..+. ..+ +-+.|.--.+...+-. ....|.++-+ -=.---+.++.||+.. .|+..+.+.+++..+|.+
T Consensus 377 ~~~~~~~~ame~lLk~rHlaPtygg~~-----p~aP~~kD~l---VIeevPDv~~~Ghvh~-~g~~~y~gv~~vns~T~q 447 (481)
T COG1311 377 ADYDSPLKAMEELLKRRHLAPTYGGTL-----PIAPETKDYL---VIEEVPDVFHTGHVHK-FGTGVYEGVNLVNSGTWQ 447 (481)
T ss_pred CCccchHHHHHHHHHhcccCCCCCCcc-----ccccCCcCce---eeccCCcEEEEccccc-cceeEEeccceEEeeeec
Confidence 221111 111 1122222111111000 0011111110 0001246789999998 688888888899999988
Q ss_pred CCcccccCceeEEEecCce
Q 036498 265 NYCGEFNNAGAFMCVDASL 283 (294)
Q Consensus 265 ~y~~~~~n~ga~l~i~~~~ 283 (294)
.+ ...+.++-|+...
T Consensus 448 ~q----Tefqk~vni~p~~ 462 (481)
T COG1311 448 EQ----TEFQKMVNINPTP 462 (481)
T ss_pred ch----hccceEEEecCcc
Confidence 65 3466666665543
No 81
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.83 E-value=0.033 Score=50.18 Aligned_cols=24 Identities=4% Similarity=-0.033 Sum_probs=21.3
Q ss_pred eCHHHHHHHHHhcCCceEeeccee
Q 036498 221 FGADKVAEFLNKQDLDLICRAHQV 244 (294)
Q Consensus 221 fg~~~~~~fl~~~g~~~iIrgH~~ 244 (294)
-+++..++.|++.+-.+|.-||+.
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC
Confidence 367889999999999999999975
No 82
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.69 E-value=0.0025 Score=52.69 Aligned_cols=66 Identities=23% Similarity=0.342 Sum_probs=47.3
Q ss_pred eEeeccccChhhHHHHHHhCC--CCCCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcc
Q 036498 54 NICGDIHGQYPDLLRLFEYGG--FPPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHE 120 (294)
Q Consensus 54 ~viGDIHG~~~~l~~~l~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE 120 (294)
.|+||+||+++.+.+-++.+. -.+-+-+|++||+..-....-+ +.-.+.=....|-..+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC
Confidence 489999999999977766532 2355778899999976555433 33333334456778999999998
No 83
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=96.69 E-value=0.0018 Score=56.66 Aligned_cols=74 Identities=19% Similarity=0.200 Sum_probs=44.6
Q ss_pred cCCeeEeeccccChhhHHHHHHhCCCCCCCceeeeccccccccchHH-------------------------HHHHHhhh
Q 036498 50 EAPINICGDIHGQYPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIE-------------------------TICLLLLY 104 (294)
Q Consensus 50 ~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~e-------------------------vl~~l~~l 104 (294)
..+|.+++|.||+++.+.++.+.+.-...|.++|+||++-....+-| .+.-++..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 45799999999999999999988766677889999999864433322 22223332
Q ss_pred hhcCCCeEEEeccCccccc
Q 036498 105 KIKYPDNFFLLRGNHECAS 123 (294)
Q Consensus 105 ~~~~~~~v~~lrGNHE~~~ 123 (294)
--..+-.+++|+||||...
T Consensus 85 L~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 85 LGELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HHCC-SEEEEE--TTS-SH
T ss_pred HHhcCCcEEEecCCCCchH
Confidence 3345667999999999954
No 84
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.61 E-value=0.0027 Score=53.62 Aligned_cols=48 Identities=23% Similarity=0.254 Sum_probs=30.9
Q ss_pred CCCCceeeeccccccccchH--H---HHHHHhhhhhc-C----CCeEEEeccCccccc
Q 036498 76 PPDSNYLFLGDYVDRGKQSI--E---TICLLLLYKIK-Y----PDNFFLLRGNHECAS 123 (294)
Q Consensus 76 ~~~~~~vfLGD~vDrG~~s~--e---vl~~l~~l~~~-~----~~~v~~lrGNHE~~~ 123 (294)
...+.+|++||++|.+.... + .+..+..+... . +..++.+.||||...
T Consensus 44 ~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 44 LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 35678999999999886432 2 23333232211 1 456999999999964
No 85
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.57 E-value=0.003 Score=54.50 Aligned_cols=46 Identities=20% Similarity=0.351 Sum_probs=32.2
Q ss_pred CCCceeeeccccccccch--HHHHHHHhhhhhcC----CCeEEEeccCcccc
Q 036498 77 PDSNYLFLGDYVDRGKQS--IETICLLLLYKIKY----PDNFFLLRGNHECA 122 (294)
Q Consensus 77 ~~~~~vfLGD~vDrG~~s--~evl~~l~~l~~~~----~~~v~~lrGNHE~~ 122 (294)
..+-+|||||++|.|+.+ .+..+.+..++..+ ...++.|.||||.-
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 467788999999999854 23455454444322 23689999999975
No 86
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.52 E-value=0.0029 Score=56.31 Aligned_cols=66 Identities=26% Similarity=0.254 Sum_probs=42.2
Q ss_pred CeeEeeccccCh---------hhHHHHHHhCCCCCCC-ceeeeccccccccchH-----HHHHHHhhhhhcCCCeEEEec
Q 036498 52 PINICGDIHGQY---------PDLLRLFEYGGFPPDS-NYLFLGDYVDRGKQSI-----ETICLLLLYKIKYPDNFFLLR 116 (294)
Q Consensus 52 ~i~viGDIHG~~---------~~l~~~l~~~~~~~~~-~~vfLGD~vDrG~~s~-----evl~~l~~l~~~~~~~v~~lr 116 (294)
+|+.++|+||.+ ..+.++++...-...+ .++..||+++..+.+. .++..+..+. . -++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g----~-d~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG----Y-DAVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC----C-CEEee
Confidence 578999999886 5566667665443334 4456899999877543 3444443322 2 23556
Q ss_pred cCcccc
Q 036498 117 GNHECA 122 (294)
Q Consensus 117 GNHE~~ 122 (294)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999974
No 87
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.49 E-value=0.006 Score=50.33 Aligned_cols=70 Identities=17% Similarity=0.124 Sum_probs=42.7
Q ss_pred CeeEeeccccC------------hhhHHHH-HHhC--CCCCCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEec
Q 036498 52 PINICGDIHGQ------------YPDLLRL-FEYG--GFPPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLR 116 (294)
Q Consensus 52 ~i~viGDIHG~------------~~~l~~~-l~~~--~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lr 116 (294)
.++++||+|=. .+....+ ++.. -..|+|.+.+|||+.-.-..-.+....+.+ -+.+.++|+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~Iler----LnGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILER----LNGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHH----cCCcEEEee
Confidence 47888999832 3333222 2211 134677788999999655444444333333 367889999
Q ss_pred cCcccccch
Q 036498 117 GNHECASIN 125 (294)
Q Consensus 117 GNHE~~~~~ 125 (294)
||||-.-..
T Consensus 81 GNhDk~~~~ 89 (186)
T COG4186 81 GNHDKCHPM 89 (186)
T ss_pred CCCCCCccc
Confidence 999986543
No 88
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.19 E-value=0.008 Score=57.26 Aligned_cols=72 Identities=22% Similarity=0.167 Sum_probs=50.2
Q ss_pred CeeEeeccccC-------------hhhHHHHHHhCCCCCCCceeeeccccccccchHHHHHHHhhhhhc-C--CCeEEEe
Q 036498 52 PINICGDIHGQ-------------YPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLLLYKIK-Y--PDNFFLL 115 (294)
Q Consensus 52 ~i~viGDIHG~-------------~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~-~--~~~v~~l 115 (294)
|+..++|.|=- +.+|..+++.+.-...|-+|+-||+.|+..-|.+++.++...-.. . .-.+++|
T Consensus 2 kilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~I 81 (390)
T COG0420 2 KILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVVI 81 (390)
T ss_pred eeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEEe
Confidence 67788999932 455566666665555677888999999987777766554433221 1 2379999
Q ss_pred ccCccccc
Q 036498 116 RGNHECAS 123 (294)
Q Consensus 116 rGNHE~~~ 123 (294)
.||||..-
T Consensus 82 ~GNHD~~~ 89 (390)
T COG0420 82 AGNHDSPS 89 (390)
T ss_pred cCCCCchh
Confidence 99999964
No 89
>PLN02533 probable purple acid phosphatase
Probab=95.88 E-value=0.01 Score=57.34 Aligned_cols=71 Identities=14% Similarity=0.069 Sum_probs=41.5
Q ss_pred cCCeeEeeccccChhhHHHHHHhCCCCCCCceeeeccccccccchH--H-HHHHHhhhhhcCCCeEEEeccCccccc
Q 036498 50 EAPINICGDIHGQYPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSI--E-TICLLLLYKIKYPDNFFLLRGNHECAS 123 (294)
Q Consensus 50 ~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~--e-vl~~l~~l~~~~~~~v~~lrGNHE~~~ 123 (294)
+-+++++||+|- .......++.+.....+-++++||+++.+.... + -..++..+... -.++.+.||||...
T Consensus 139 ~~~f~v~GDlG~-~~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~--~P~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGT-SEWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQ--RPWMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCC-CcccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhc--CceEEeCccccccc
Confidence 346999999963 222233444443345566778999997643321 1 12222222222 34899999999863
No 90
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=95.83 E-value=0.0095 Score=54.01 Aligned_cols=66 Identities=20% Similarity=0.157 Sum_probs=39.2
Q ss_pred CeeEeeccccChh----------------hHHHHHHhCCCCCCCceee-eccccccccch-----------HHHHHHHhh
Q 036498 52 PINICGDIHGQYP----------------DLLRLFEYGGFPPDSNYLF-LGDYVDRGKQS-----------IETICLLLL 103 (294)
Q Consensus 52 ~i~viGDIHG~~~----------------~l~~~l~~~~~~~~~~~vf-LGD~vDrG~~s-----------~evl~~l~~ 103 (294)
+|+.++|+||++. .+..+++...-...+.+++ .||+++..+.+ ..++..+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 4788999999963 3555666554333344443 79999866522 224444443
Q ss_pred hhhcCCCeEEEeccCcccc
Q 036498 104 YKIKYPDNFFLLRGNHECA 122 (294)
Q Consensus 104 l~~~~~~~v~~lrGNHE~~ 122 (294)
+. . -++..||||..
T Consensus 82 ~g---~--d~~~lGNHe~d 95 (277)
T cd07410 82 LG---Y--DAGTLGNHEFN 95 (277)
T ss_pred cC---C--CEEeecccCcc
Confidence 33 2 24556999964
No 91
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.65 E-value=0.017 Score=49.81 Aligned_cols=67 Identities=18% Similarity=0.167 Sum_probs=40.6
Q ss_pred eeccccChhhHHHHHHhCCC-CCCCceeeeccccccccchHHH-HHHHhhhhhcC---------------------CCeE
Q 036498 56 CGDIHGQYPDLLRLFEYGGF-PPDSNYLFLGDYVDRGKQSIET-ICLLLLYKIKY---------------------PDNF 112 (294)
Q Consensus 56 iGDIHG~~~~l~~~l~~~~~-~~~~~~vfLGD~vDrG~~s~ev-l~~l~~l~~~~---------------------~~~v 112 (294)
-=|++|+=.=|.+.++.+-. -..+.++||||++|.|--+-+- -......+..+ ...+
T Consensus 22 rld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~ 101 (193)
T cd08164 22 RLDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPL 101 (193)
T ss_pred eehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceE
Confidence 34667776667777765433 3457788999999987432221 12222222111 2467
Q ss_pred EEeccCcccc
Q 036498 113 FLLRGNHECA 122 (294)
Q Consensus 113 ~~lrGNHE~~ 122 (294)
+.|.||||.-
T Consensus 102 i~V~GNHDIG 111 (193)
T cd08164 102 INIAGNHDVG 111 (193)
T ss_pred EEECCcccCC
Confidence 9999999994
No 92
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.32 E-value=0.24 Score=40.71 Aligned_cols=115 Identities=23% Similarity=0.364 Sum_probs=77.0
Q ss_pred eeEeecccc--ChhhHHHHHHhCCCCCC-CceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhc
Q 036498 53 INICGDIHG--QYPDLLRLFEYGGFPPD-SNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYG 129 (294)
Q Consensus 53 i~viGDIHG--~~~~l~~~l~~~~~~~~-~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~ 129 (294)
+.++||+|= ...+|-.=|++.-.|.. ..++++|++. |.|+++++..+. ..++++||--|...
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~~------ 67 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDENL------ 67 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCccc------
Confidence 568999993 34444444555445554 5677899987 788888887665 56999999776641
Q ss_pred hHHHHhhccChHHHhHHhhhhccchhee--eecC-ceEEecCCCCcCCCChHHHhcccCCCCCCCccceeeeeccCCCCC
Q 036498 130 FYDECKRRFSVRLWKHFTECFNCLPVAA--VIDD-KILCMHGGLSPEMESLDQIRAIQRPIDVPDQGLLCDLLWSDPDRD 206 (294)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~lP~~~--~i~~-~~l~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~ 206 (294)
.-|..- .++. ++-++||-. =+-|+||
T Consensus 68 ----------------------~yP~~kvvtvGqfkIG~chGhq--------------------------ViP~gd~--- 96 (183)
T KOG3325|consen 68 ----------------------KYPENKVVTVGQFKIGLCHGHQ--------------------------VIPWGDP--- 96 (183)
T ss_pred ----------------------cCCccceEEeccEEEEeecCcE--------------------------eecCCCH---
Confidence 112221 2233 688999842 2235555
Q ss_pred CCCCCcCCCcceeeeCHHHHHHHHHhcCCceEeecceeeccCcc
Q 036498 207 IRGWGENDRGVSYTFGADKVAEFLNKQDLDLICRAHQVVEDGFE 250 (294)
Q Consensus 207 ~~~~~~~~rg~~~~fg~~~~~~fl~~~g~~~iIrgH~~~~~G~~ 250 (294)
+++...-+..++|.++-|||..-+.|+
T Consensus 97 -----------------~sL~~LaRqldvDILl~G~Th~f~Aye 123 (183)
T KOG3325|consen 97 -----------------ESLALLARQLDVDILLTGHTHKFEAYE 123 (183)
T ss_pred -----------------HHHHHHHHhcCCcEEEeCCceeEEEEE
Confidence 356677788899999999998776665
No 93
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=95.17 E-value=0.032 Score=50.26 Aligned_cols=70 Identities=21% Similarity=0.197 Sum_probs=39.4
Q ss_pred CeeEeeccccCh----hhHHHHH-HhCCCCCCCceeeecccc-ccccch------HHHHHHHhhhhhcCCCeEEEeccCc
Q 036498 52 PINICGDIHGQY----PDLLRLF-EYGGFPPDSNYLFLGDYV-DRGKQS------IETICLLLLYKIKYPDNFFLLRGNH 119 (294)
Q Consensus 52 ~i~viGDIHG~~----~~l~~~l-~~~~~~~~~~~vfLGD~v-DrG~~s------~evl~~l~~l~~~~~~~v~~lrGNH 119 (294)
+++++||.-... .++.+.+ +.+.....+-+|++||++ +-|..+ .+.+..++... ...-.++.++|||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~-~~~~P~~~v~GNH 80 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAP-SLQVPWYLVLGNH 80 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccch-hhcCCeEEecCCc
Confidence 478999987641 2333332 333324456688999997 444321 12222222211 1234699999999
Q ss_pred ccc
Q 036498 120 ECA 122 (294)
Q Consensus 120 E~~ 122 (294)
|..
T Consensus 81 D~~ 83 (277)
T cd07378 81 DYS 83 (277)
T ss_pred ccC
Confidence 986
No 94
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=95.00 E-value=0.059 Score=47.71 Aligned_cols=102 Identities=21% Similarity=0.253 Sum_probs=58.9
Q ss_pred ecCCeeEeeccccChhhHH----------------HHHH-hCCCCCCCceeeeccccccccc-----hHHHHHHHhhhhh
Q 036498 49 LEAPINICGDIHGQYPDLL----------------RLFE-YGGFPPDSNYLFLGDYVDRGKQ-----SIETICLLLLYKI 106 (294)
Q Consensus 49 ~~~~i~viGDIHG~~~~l~----------------~~l~-~~~~~~~~~~vfLGD~vDrG~~-----s~evl~~l~~l~~ 106 (294)
...++.||+|+|=-++... +.+. .+.....+++|.+||+-.-.+. ..++-.++..++
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~- 96 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLD- 96 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhc-
Confidence 3578999999995444332 2222 1222345789999999975433 233333333333
Q ss_pred cCCCeEEEeccCcccccchhhhchHHHHhhccChHHHhHHhhhhccchheeeecCceEEecCCCCcC
Q 036498 107 KYPDNFFLLRGNHECASINRIYGFYDECKRRFSVRLWKHFTECFNCLPVAAVIDDKILCMHGGLSPE 173 (294)
Q Consensus 107 ~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~~~ 173 (294)
.. .+.+++||||...-....++ + ...++.. . .++++++||=-.+.
T Consensus 97 ~~--evi~i~GNHD~~i~~~~~~~--------~----------v~v~~~~-~-i~~~~~~HGh~~~~ 141 (235)
T COG1407 97 ER--EVIIIRGNHDNGIEEILPGF--------N----------VEVVDEL-E-IGGLLFRHGHKEPE 141 (235)
T ss_pred cC--cEEEEeccCCCccccccccC--------C----------ceeeeeE-E-ecCEEEEeCCCCCc
Confidence 22 49999999999643322211 0 1223333 2 34699999965544
No 95
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=94.97 E-value=0.018 Score=55.38 Aligned_cols=113 Identities=16% Similarity=0.050 Sum_probs=93.1
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCceeeec-C---CeeEeeccccChhhHHHHHHhCCCCC-CCceeeeccccccccchHHH
Q 036498 23 QMNESEIRQLCFTAKQIFLAQPNLLELE-A---PINICGDIHGQYPDLLRLFEYGGFPP-DSNYLFLGDYVDRGKQSIET 97 (294)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ep~~~~~~-~---~i~viGDIHG~~~~l~~~l~~~~~~~-~~~~vfLGD~vDrG~~s~ev 97 (294)
-|...++..++.-+.++++.+|+-.... . -.+.++|.||.+.++.++++.- |. ..-|++=|++++++....+.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A 91 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKA 91 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHH
Confidence 4667888999999999999999766553 2 3789999999999888888763 32 34588899999999999999
Q ss_pred HHHHhhhhhcCCCeEEEeccCcccccchhhhchHHHHhhc
Q 036498 98 ICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDECKRR 137 (294)
Q Consensus 98 l~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~ 137 (294)
+..+...+...|....+.|++||...+-..++|..+....
T Consensus 92 ~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~ 131 (476)
T KOG0376|consen 92 LLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTP 131 (476)
T ss_pred HHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCC
Confidence 9999999999999999999999998777777776555433
No 96
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=94.83 E-value=0.68 Score=41.74 Aligned_cols=42 Identities=14% Similarity=0.267 Sum_probs=26.5
Q ss_pred CceEeecceeeccCccccC--CccEEEEeccCCCcccccCceeEEEecC
Q 036498 235 LDLICRAHQVVEDGFEFFA--DRRLVTIFSAPNYCGEFNNAGAFMCVDA 281 (294)
Q Consensus 235 ~~~iIrgH~~~~~G~~~~~--~~~vitifSa~~y~~~~~n~ga~l~i~~ 281 (294)
=+.++.||++. .|.+.+. +++-+.+.|.|.| ...|.++.+|=
T Consensus 204 PhVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~F----s~t~~~vlvdl 247 (257)
T cd07387 204 PHVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSF----SKTGTAVLVNL 247 (257)
T ss_pred CCEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCc----CcCCEEEEEEC
Confidence 35578999986 3544432 2566777888887 34566666653
No 97
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=94.54 E-value=0.044 Score=49.20 Aligned_cols=66 Identities=21% Similarity=0.128 Sum_probs=39.0
Q ss_pred CeeEeeccccChh----------hHHHHHHhCCCCCCCceeeeccccccccch-----HHHHHHHhhhhhcCCCeEEEec
Q 036498 52 PINICGDIHGQYP----------DLLRLFEYGGFPPDSNYLFLGDYVDRGKQS-----IETICLLLLYKIKYPDNFFLLR 116 (294)
Q Consensus 52 ~i~viGDIHG~~~----------~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~~~~~~~v~~lr 116 (294)
+|+-++|+||++. .+..+++...-.++.-++..||.++..+.+ ..++..+-.+. -.+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g----~d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVG----YDA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcC----CcE-Ecc
Confidence 4678999999854 355566655433444455689999876533 22333332222 223 456
Q ss_pred cCcccc
Q 036498 117 GNHECA 122 (294)
Q Consensus 117 GNHE~~ 122 (294)
||||.-
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999964
No 98
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=94.32 E-value=0.04 Score=50.36 Aligned_cols=66 Identities=24% Similarity=0.254 Sum_probs=40.6
Q ss_pred CeeEeeccccChhh--------------HHHHHHhCCCCC-CCceeeeccccccccc-h-----HHHHHHHhhhhhcCCC
Q 036498 52 PINICGDIHGQYPD--------------LLRLFEYGGFPP-DSNYLFLGDYVDRGKQ-S-----IETICLLLLYKIKYPD 110 (294)
Q Consensus 52 ~i~viGDIHG~~~~--------------l~~~l~~~~~~~-~~~~vfLGD~vDrG~~-s-----~evl~~l~~l~~~~~~ 110 (294)
+|..++|+||++.. +..+++...... +.-++..||.+...+. + ..++..+.++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~---- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV---- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----
Confidence 47789999998653 556666554332 3345568999987653 2 234555544442
Q ss_pred eEEEeccCcccc
Q 036498 111 NFFLLRGNHECA 122 (294)
Q Consensus 111 ~v~~lrGNHE~~ 122 (294)
. .+..||||.-
T Consensus 78 D-a~t~GNHefd 88 (288)
T cd07412 78 D-ASAVGNHEFD 88 (288)
T ss_pred e-eeeecccccc
Confidence 2 3556999974
No 99
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=94.24 E-value=0.14 Score=47.51 Aligned_cols=49 Identities=16% Similarity=0.124 Sum_probs=31.6
Q ss_pred CCCCceeeecccccccc--chHHHHHHHhhhhhcCCCeEEEeccCcccccc
Q 036498 76 PPDSNYLFLGDYVDRGK--QSIETICLLLLYKIKYPDNFFLLRGNHECASI 124 (294)
Q Consensus 76 ~~~~~~vfLGD~vDrG~--~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~ 124 (294)
...|-+||+||.|+.-. +...++....+=.+.+.=....+.||||....
T Consensus 99 E~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes~ 149 (379)
T KOG1432|consen 99 EKPDLVVFTGDNIFGHSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDESD 149 (379)
T ss_pred cCCCEEEEeCCcccccccHhHHHHHHHHhhhHhhcCCCeEEEecccccccc
Confidence 44677889999998622 22333333333334455568899999999654
No 100
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=92.94 E-value=0.12 Score=46.48 Aligned_cols=64 Identities=17% Similarity=0.154 Sum_probs=35.7
Q ss_pred eeEeeccccChhh----------------------HHHHHHhCCCC-CCCce-eeeccccccccchH-----HHHHHHhh
Q 036498 53 INICGDIHGQYPD----------------------LLRLFEYGGFP-PDSNY-LFLGDYVDRGKQSI-----ETICLLLL 103 (294)
Q Consensus 53 i~viGDIHG~~~~----------------------l~~~l~~~~~~-~~~~~-vfLGD~vDrG~~s~-----evl~~l~~ 103 (294)
+..++|+||++.. +..+++...-. ..+.+ +..||+++..+.+. .++..+..
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~ 82 (264)
T cd07411 3 LLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNA 82 (264)
T ss_pred EEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHh
Confidence 5678888887533 34445544333 33334 45899998765432 33444333
Q ss_pred hhhcCCCeEEEeccCcccc
Q 036498 104 YKIKYPDNFFLLRGNHECA 122 (294)
Q Consensus 104 l~~~~~~~v~~lrGNHE~~ 122 (294)
+. -.+ +. ||||..
T Consensus 83 ~g----~da-~~-GNHefd 95 (264)
T cd07411 83 LG----VDA-MV-GHWEFT 95 (264)
T ss_pred hC----CeE-Ee-cccccc
Confidence 22 223 33 999964
No 101
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=92.27 E-value=0.19 Score=45.85 Aligned_cols=71 Identities=23% Similarity=0.248 Sum_probs=41.1
Q ss_pred eeEeeccccC---hhhHHHHHHhCCC--CCCCceeeeccccccccchH--H------HHHHHhhhhhcCC-CeEEEeccC
Q 036498 53 INICGDIHGQ---YPDLLRLFEYGGF--PPDSNYLFLGDYVDRGKQSI--E------TICLLLLYKIKYP-DNFFLLRGN 118 (294)
Q Consensus 53 i~viGDIHG~---~~~l~~~l~~~~~--~~~~~~vfLGD~vDrG~~s~--e------vl~~l~~l~~~~~-~~v~~lrGN 118 (294)
..-.|+-. | ...+..+++.+.- ++.+-+|+.||+++.+.... + .-.+...++..+| -.++.+.||
T Consensus 40 ~~~~G~~~-CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 40 AGPWGDYG-CDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CCCCcCcC-CCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 44456654 4 3444555554433 35677889999998875421 1 1112222333333 379999999
Q ss_pred cccccc
Q 036498 119 HECASI 124 (294)
Q Consensus 119 HE~~~~ 124 (294)
||....
T Consensus 119 HD~~p~ 124 (296)
T cd00842 119 HDSYPV 124 (296)
T ss_pred CCCCcc
Confidence 998654
No 102
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=92.20 E-value=0.35 Score=36.78 Aligned_cols=39 Identities=18% Similarity=0.459 Sum_probs=30.9
Q ss_pred hHHHHHHHHcccCCCCcccccCHHHHHHHHHHHHHHHhcCCceeee
Q 036498 4 LEGLLERLLEGRYNRGKRIQMNESEIRQLCFTAKQIFLAQPNLLEL 49 (294)
Q Consensus 4 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ep~~~~~ 49 (294)
+.++|+.+.... .|+...+..++.++.++|+++|+++++
T Consensus 57 v~~mie~FK~~K-------~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 57 VKAMIEWFKNQK-------KLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp HHHHHHHHHCT-----------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred HHHHHHHHHhCC-------CccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 577888888777 899999999999999999999999975
No 103
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=92.10 E-value=0.26 Score=41.84 Aligned_cols=44 Identities=25% Similarity=0.377 Sum_probs=28.4
Q ss_pred CCCceeeecccc--ccccchHHHHHHHhhhhhcCCCeEEEeccCcccccc
Q 036498 77 PDSNYLFLGDYV--DRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASI 124 (294)
Q Consensus 77 ~~~~~vfLGD~v--DrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~ 124 (294)
++|.++.-||+- -|=++..+-+.++-+ -|..-+++|||||.+.-
T Consensus 43 ~eDiVllpGDiSWaM~l~ea~~Dl~~i~~----LPG~K~m~rGNHDYWw~ 88 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEAEEDLRFIGD----LPGTKYMIRGNHDYWWS 88 (230)
T ss_pred hhhEEEecccchhheechhhhhhhhhhhc----CCCcEEEEecCCccccc
Confidence 344455569975 234444444555533 47788999999999864
No 104
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=91.73 E-value=0.17 Score=55.08 Aligned_cols=66 Identities=18% Similarity=0.117 Sum_probs=40.6
Q ss_pred CeeEeeccccCh---hhHHHHHHhCCCCCCCceee-eccccccccch-----HHHHHHHhhhhhcCCCeEEEeccCcccc
Q 036498 52 PINICGDIHGQY---PDLLRLFEYGGFPPDSNYLF-LGDYVDRGKQS-----IETICLLLLYKIKYPDNFFLLRGNHECA 122 (294)
Q Consensus 52 ~i~viGDIHG~~---~~l~~~l~~~~~~~~~~~vf-LGD~vDrG~~s-----~evl~~l~~l~~~~~~~v~~lrGNHE~~ 122 (294)
+|+.++|+||.+ ..+..+++...-...+.+++ .||++++.+.+ ..++.++..+. --++..||||..
T Consensus 662 ~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEfd 736 (1163)
T PRK09419 662 TILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEFD 736 (1163)
T ss_pred EEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEecccccc
Confidence 588999999985 34444455443223334444 79999887644 23455444433 135689999974
No 105
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=91.40 E-value=0.3 Score=46.66 Aligned_cols=45 Identities=24% Similarity=0.330 Sum_probs=29.7
Q ss_pred CCCceeeeccccccccch--HHHHHHHhhhhhcCC----CeEEEeccCccc
Q 036498 77 PDSNYLFLGDYVDRGKQS--IETICLLLLYKIKYP----DNFFLLRGNHEC 121 (294)
Q Consensus 77 ~~~~~vfLGD~vDrG~~s--~evl~~l~~l~~~~~----~~v~~lrGNHE~ 121 (294)
..+.++||||++|-|... -|--....+++..++ ..+..+.||||.
T Consensus 93 kPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 93 KPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred CCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 346677899999988643 222233333444444 378999999998
No 106
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=90.95 E-value=0.28 Score=44.02 Aligned_cols=64 Identities=22% Similarity=0.116 Sum_probs=38.7
Q ss_pred eeEeeccc----------cChhhHHHHHHhCCCCCCC-ceeeeccccccccch-----HHHHHHHhhhhhcCCCeEEEec
Q 036498 53 INICGDIH----------GQYPDLLRLFEYGGFPPDS-NYLFLGDYVDRGKQS-----IETICLLLLYKIKYPDNFFLLR 116 (294)
Q Consensus 53 i~viGDIH----------G~~~~l~~~l~~~~~~~~~-~~vfLGD~vDrG~~s-----~evl~~l~~l~~~~~~~v~~lr 116 (294)
|.-+.|+| |.+..+..++++..-...+ -++..||+++..+.+ ..++..+..+. --+...
T Consensus 3 il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~ 77 (257)
T cd07406 3 ILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACF 77 (257)
T ss_pred EEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEee
Confidence 44456666 3466777777765443334 444589999876532 34455444443 135678
Q ss_pred cCccc
Q 036498 117 GNHEC 121 (294)
Q Consensus 117 GNHE~ 121 (294)
||||.
T Consensus 78 GNHef 82 (257)
T cd07406 78 GNHEF 82 (257)
T ss_pred ccccc
Confidence 99997
No 107
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=90.35 E-value=0.65 Score=39.99 Aligned_cols=72 Identities=14% Similarity=0.117 Sum_probs=41.0
Q ss_pred eeEeeccccC-----hhhHHHHHHhCC-CCCCCceeeeccccccccchH-------------HHHHHHhhhhhc--CCCe
Q 036498 53 INICGDIHGQ-----YPDLLRLFEYGG-FPPDSNYLFLGDYVDRGKQSI-------------ETICLLLLYKIK--YPDN 111 (294)
Q Consensus 53 i~viGDIHG~-----~~~l~~~l~~~~-~~~~~~~vfLGD~vDrG~~s~-------------evl~~l~~l~~~--~~~~ 111 (294)
|++++|+|=. ++.|.++|+.+. -...+.+|++|+++|.-.... ..+..+...... ..-+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5778888854 677788888777 556678999999999622111 111111111111 2348
Q ss_pred EEEeccCcccccc
Q 036498 112 FFLLRGNHECASI 124 (294)
Q Consensus 112 v~~lrGNHE~~~~ 124 (294)
++++.|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998655
No 108
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=90.22 E-value=0.38 Score=43.78 Aligned_cols=66 Identities=18% Similarity=0.130 Sum_probs=36.1
Q ss_pred CeeEeeccccCh---------------------hhHHHHHHhCCCCCCCc-eeeeccccccccch-----HHHHHHHhhh
Q 036498 52 PINICGDIHGQY---------------------PDLLRLFEYGGFPPDSN-YLFLGDYVDRGKQS-----IETICLLLLY 104 (294)
Q Consensus 52 ~i~viGDIHG~~---------------------~~l~~~l~~~~~~~~~~-~vfLGD~vDrG~~s-----~evl~~l~~l 104 (294)
+|.-++|+||++ ..+..+++...-..... ++-.||.++..+.+ ..+++.+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 467789999875 33444555543222233 33479999876532 2223333322
Q ss_pred hhcCCCeEEEeccCcccc
Q 036498 105 KIKYPDNFFLLRGNHECA 122 (294)
Q Consensus 105 ~~~~~~~v~~lrGNHE~~ 122 (294)
. . .+ +..||||.-
T Consensus 82 g---~-D~-~~lGNHefd 94 (281)
T cd07409 82 G---Y-DA-MTLGNHEFD 94 (281)
T ss_pred C---C-CE-EEecccccc
Confidence 2 2 23 445999974
No 109
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=88.00 E-value=0.77 Score=43.04 Aligned_cols=73 Identities=26% Similarity=0.347 Sum_probs=47.6
Q ss_pred CeeEeeccccChhhHHHH---HHhCCCCCCCceeeeccccc-ccc---chHHH-------HHHH--hhhhhcCCCeEEEe
Q 036498 52 PINICGDIHGQYPDLLRL---FEYGGFPPDSNYLFLGDYVD-RGK---QSIET-------ICLL--LLYKIKYPDNFFLL 115 (294)
Q Consensus 52 ~i~viGDIHG~~~~l~~~---l~~~~~~~~~~~vfLGD~vD-rG~---~s~ev-------l~~l--~~l~~~~~~~v~~l 115 (294)
+|+|=|--||.++.+-+- .++.|-.+.|.++++||+=. |.. +++.| =.|. +.=...+|---.+|
T Consensus 2 rIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIFI 81 (456)
T KOG2863|consen 2 RIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIFI 81 (456)
T ss_pred ceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEEe
Confidence 789999999999999744 44555567788999999863 211 11111 1111 11123456667899
Q ss_pred ccCcccccc
Q 036498 116 RGNHECASI 124 (294)
Q Consensus 116 rGNHE~~~~ 124 (294)
-||||.+..
T Consensus 82 GGNHEAsny 90 (456)
T KOG2863|consen 82 GGNHEASNY 90 (456)
T ss_pred cCchHHHHH
Confidence 999999753
No 110
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=87.01 E-value=0.65 Score=42.37 Aligned_cols=66 Identities=21% Similarity=0.056 Sum_probs=35.1
Q ss_pred CeeEeeccccChhh----------HHHHHHhCCC-----CCCCceeeeccccccccch-----HHHHHHHhhhhhcCCCe
Q 036498 52 PINICGDIHGQYPD----------LLRLFEYGGF-----PPDSNYLFLGDYVDRGKQS-----IETICLLLLYKIKYPDN 111 (294)
Q Consensus 52 ~i~viGDIHG~~~~----------l~~~l~~~~~-----~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~~~~~~~ 111 (294)
.|+.++|+||++.. +..+++.... .++.-++-.||.+...+.+ ..+++++-.+.. .
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~----D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY----D 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCC----c
Confidence 36788999998643 3444444321 2222333479998543322 223344443332 2
Q ss_pred EEEeccCcccc
Q 036498 112 FFLLRGNHECA 122 (294)
Q Consensus 112 v~~lrGNHE~~ 122 (294)
+ +..||||.-
T Consensus 78 a-~~~GNHEfD 87 (285)
T cd07405 78 A-MAVGNHEFD 87 (285)
T ss_pred E-Eeecccccc
Confidence 3 445999974
No 111
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=86.50 E-value=0.62 Score=46.16 Aligned_cols=69 Identities=25% Similarity=0.223 Sum_probs=40.8
Q ss_pred cCCeeEeeccccChh------------hHHH---HHHhCCCCCCCcee-eecccccccc------chHHHHHHHhhhhhc
Q 036498 50 EAPINICGDIHGQYP------------DLLR---LFEYGGFPPDSNYL-FLGDYVDRGK------QSIETICLLLLYKIK 107 (294)
Q Consensus 50 ~~~i~viGDIHG~~~------------~l~~---~l~~~~~~~~~~~v-fLGD~vDrG~------~s~evl~~l~~l~~~ 107 (294)
+-+|+-+.|+||++. -+.+ +.++..-.....++ =.||+++..+ .....+.++-.++.
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y- 104 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY- 104 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC-
Confidence 346888999999998 3333 33333222223333 3799999833 22344555555542
Q ss_pred CCCeEEEeccCccccc
Q 036498 108 YPDNFFLLRGNHECAS 123 (294)
Q Consensus 108 ~~~~v~~lrGNHE~~~ 123 (294)
=....||||.-.
T Consensus 105 ----Da~tiGNHEFd~ 116 (517)
T COG0737 105 ----DAMTLGNHEFDY 116 (517)
T ss_pred ----cEEeeccccccc
Confidence 246779999954
No 112
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.29 E-value=1.2 Score=43.06 Aligned_cols=70 Identities=21% Similarity=0.347 Sum_probs=52.2
Q ss_pred ecCCeeEeeccccChhhHHHHHHhCCCC--CCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCc
Q 036498 49 LEAPINICGDIHGQYPDLLRLFEYGGFP--PDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNH 119 (294)
Q Consensus 49 ~~~~i~viGDIHG~~~~l~~~l~~~~~~--~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNH 119 (294)
.+.+|.|+||+-|+++.|.+-.+.+... |-+.++++|++.+-..++-|++.+.... ...|-.++++-+|-
T Consensus 4 ~~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~-~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 4 ADAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGT-KKVPIPTYFLGDNA 75 (528)
T ss_pred CCceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCC-ccCceeEEEecCCC
Confidence 3479999999999999997776655432 4677889999999867788877665433 34566677777765
No 113
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=84.82 E-value=0.83 Score=41.73 Aligned_cols=66 Identities=21% Similarity=0.090 Sum_probs=35.9
Q ss_pred CeeEeeccccChhh-------------HHHHHHhC----CC-CCCCceeeeccccccccch-------HHHHHHHhhhhh
Q 036498 52 PINICGDIHGQYPD-------------LLRLFEYG----GF-PPDSNYLFLGDYVDRGKQS-------IETICLLLLYKI 106 (294)
Q Consensus 52 ~i~viGDIHG~~~~-------------l~~~l~~~----~~-~~~~~~vfLGD~vDrG~~s-------~evl~~l~~l~~ 106 (294)
.|+-++|+||++.. +.++.+.. .. .++.-++..||.++.-+.+ ..+++++-.+.
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg- 85 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP- 85 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC-
Confidence 57889999998642 12222221 11 1222344579999764322 22344443333
Q ss_pred cCCCeEEEeccCcccc
Q 036498 107 KYPDNFFLLRGNHECA 122 (294)
Q Consensus 107 ~~~~~v~~lrGNHE~~ 122 (294)
-=.+..||||.-
T Consensus 86 ----yDa~tlGNHEFd 97 (282)
T cd07407 86 ----YDLLTIGNHELY 97 (282)
T ss_pred ----CcEEeecccccC
Confidence 235788999995
No 114
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=84.76 E-value=5.1 Score=38.88 Aligned_cols=34 Identities=12% Similarity=0.154 Sum_probs=25.8
Q ss_pred HHHHHHHHhcCCceEeecceeeccCccccCCccE
Q 036498 224 DKVAEFLNKQDLDLICRAHQVVEDGFEFFADRRL 257 (294)
Q Consensus 224 ~~~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~v 257 (294)
..+|..+-++++|.++-||.-.=+....-.|.++
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 3699999999999999999876555444445444
No 115
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=84.65 E-value=0.97 Score=41.92 Aligned_cols=66 Identities=18% Similarity=0.056 Sum_probs=37.6
Q ss_pred CeeEeeccccChh------hHHHHHHhCCC-----CCCCceeeeccccccccc-------------hHHHHHHHhhhhhc
Q 036498 52 PINICGDIHGQYP------DLLRLFEYGGF-----PPDSNYLFLGDYVDRGKQ-------------SIETICLLLLYKIK 107 (294)
Q Consensus 52 ~i~viGDIHG~~~------~l~~~l~~~~~-----~~~~~~vfLGD~vDrG~~-------------s~evl~~l~~l~~~ 107 (294)
.|.-+.|+||++. .+..+++...- .++..++..||.+..++. ...+++++-++..
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~- 80 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGV- 80 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCC-
Confidence 3667899999964 33333443321 223334457999975543 2344455544442
Q ss_pred CCCeEEEeccCcccc
Q 036498 108 YPDNFFLLRGNHECA 122 (294)
Q Consensus 108 ~~~~v~~lrGNHE~~ 122 (294)
=.+..||||.-
T Consensus 81 ----Da~tlGNHEFD 91 (313)
T cd08162 81 ----QAIALGNHEFD 91 (313)
T ss_pred ----cEEeccccccc
Confidence 24678999963
No 116
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=84.20 E-value=1.3 Score=40.14 Aligned_cols=67 Identities=15% Similarity=0.129 Sum_probs=46.8
Q ss_pred CeeEeeccccC--hhhHHHHHHhCCCCCC-Cceeeeccccccc-cchHHHHHHHhhhhhcCCCeEEEeccCccccc
Q 036498 52 PINICGDIHGQ--YPDLLRLFEYGGFPPD-SNYLFLGDYVDRG-KQSIETICLLLLYKIKYPDNFFLLRGNHECAS 123 (294)
Q Consensus 52 ~i~viGDIHG~--~~~l~~~l~~~~~~~~-~~~vfLGD~vDrG-~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~ 123 (294)
+|.++|||=|. ...+...|..+..... +-+|..||....| .-+.++.+.|.... -.++.+ |||+.-.
T Consensus 2 ~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~G----vDviT~-GNH~~Dk 72 (266)
T TIGR00282 2 KFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSG----VNYITM-GNHTWFQ 72 (266)
T ss_pred eEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcC----CCEEEc-cchhccC
Confidence 68999999999 6777777777654433 4444579999766 35677777766544 345555 9999853
No 117
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=82.92 E-value=1.2 Score=45.45 Aligned_cols=66 Identities=21% Similarity=0.119 Sum_probs=38.4
Q ss_pred CeeEeeccccChhh----------------HHHHHHhCCCC-CCCceeeeccccccccch-------------HHHHHHH
Q 036498 52 PINICGDIHGQYPD----------------LLRLFEYGGFP-PDSNYLFLGDYVDRGKQS-------------IETICLL 101 (294)
Q Consensus 52 ~i~viGDIHG~~~~----------------l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s-------------~evl~~l 101 (294)
+|.-..|+||++.. +..++++..-. ++..+|-.||.+...+.+ ..++.++
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~m 83 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAM 83 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHH
Confidence 57789999999753 23344443222 233344579999865432 2244444
Q ss_pred hhhhhcCCCeEEEeccCcccc
Q 036498 102 LLYKIKYPDNFFLLRGNHECA 122 (294)
Q Consensus 102 ~~l~~~~~~~v~~lrGNHE~~ 122 (294)
-.+.. =....||||.-
T Consensus 84 N~lgy-----Da~tlGNHEFd 99 (626)
T TIGR01390 84 NLLKY-----DVGNLGNHEFN 99 (626)
T ss_pred hhcCc-----cEEeccccccc
Confidence 44432 24778999964
No 118
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=82.10 E-value=2.1 Score=38.49 Aligned_cols=67 Identities=18% Similarity=0.132 Sum_probs=42.8
Q ss_pred CeeEeeccccCh--hhHHHHHHhCCCCCC-Cceeeeccccccc-cchHHHHHHHhhhhhcCCCeEEEeccCccccc
Q 036498 52 PINICGDIHGQY--PDLLRLFEYGGFPPD-SNYLFLGDYVDRG-KQSIETICLLLLYKIKYPDNFFLLRGNHECAS 123 (294)
Q Consensus 52 ~i~viGDIHG~~--~~l~~~l~~~~~~~~-~~~vfLGD~vDrG-~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~ 123 (294)
+|.+||||=|.. ..+.+.|........ +-+|..||..-.| .-+.++...|..+.. .+..+ ||||.-.
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD~ 71 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWDK 71 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccCc
Confidence 578999999984 444556655433323 3344579998766 356777777765543 34444 9998753
No 119
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=82.08 E-value=1.3 Score=45.35 Aligned_cols=69 Identities=17% Similarity=0.087 Sum_probs=41.2
Q ss_pred ecCCeeEeeccccChhh----------------HHHHHHhCCCC-CCCceeeeccccccccchH-------------HHH
Q 036498 49 LEAPINICGDIHGQYPD----------------LLRLFEYGGFP-PDSNYLFLGDYVDRGKQSI-------------ETI 98 (294)
Q Consensus 49 ~~~~i~viGDIHG~~~~----------------l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s~-------------evl 98 (294)
..-+|.-..|+||++.. +..++++..-. ++..+|-.||.+...+.+- .++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 34578889999999743 23334433222 2334455899998655321 245
Q ss_pred HHHhhhhhcCCCeEEEeccCcccc
Q 036498 99 CLLLLYKIKYPDNFFLLRGNHECA 122 (294)
Q Consensus 99 ~~l~~l~~~~~~~v~~lrGNHE~~ 122 (294)
..+-.+.. =....||||.-
T Consensus 104 ~amN~lgy-----Da~tlGNHEFd 122 (649)
T PRK09420 104 KAMNTLDY-----DVGNLGNHEFN 122 (649)
T ss_pred HHHHhcCC-----cEEeccchhhh
Confidence 55544442 35778999963
No 120
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=81.53 E-value=1.4 Score=48.19 Aligned_cols=67 Identities=21% Similarity=0.175 Sum_probs=38.4
Q ss_pred CCeeEeeccccChhh----------------HHHHHHhCCCCCCCceee-eccccccccc--------------hHHHHH
Q 036498 51 APINICGDIHGQYPD----------------LLRLFEYGGFPPDSNYLF-LGDYVDRGKQ--------------SIETIC 99 (294)
Q Consensus 51 ~~i~viGDIHG~~~~----------------l~~~l~~~~~~~~~~~vf-LGD~vDrG~~--------------s~evl~ 99 (294)
-+|..++|+||++.. +..+++.+.-.....+++ .||.+...+- ...++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 458899999998643 333444433222233444 7999986652 123344
Q ss_pred HHhhhhhcCCCeEEEeccCcccc
Q 036498 100 LLLLYKIKYPDNFFLLRGNHECA 122 (294)
Q Consensus 100 ~l~~l~~~~~~~v~~lrGNHE~~ 122 (294)
.+-.+. -=....||||.-
T Consensus 122 ~mN~lg-----yDa~~lGNHEFd 139 (1163)
T PRK09419 122 AMNALG-----YDAGTLGNHEFN 139 (1163)
T ss_pred HHhhcC-----ccEEeecccccc
Confidence 443333 124668999973
No 121
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=79.05 E-value=1.7 Score=45.49 Aligned_cols=67 Identities=19% Similarity=0.094 Sum_probs=39.0
Q ss_pred CCeeEeeccccChhhH----------------HHHHHhCCCC-CCCceeeeccccccccch--------------HHHHH
Q 036498 51 APINICGDIHGQYPDL----------------LRLFEYGGFP-PDSNYLFLGDYVDRGKQS--------------IETIC 99 (294)
Q Consensus 51 ~~i~viGDIHG~~~~l----------------~~~l~~~~~~-~~~~~vfLGD~vDrG~~s--------------~evl~ 99 (294)
-+|+-..|+||++... ..+++.+.-. ++..+|-.||++..-+.. ..++.
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 3588899999996532 2233333211 233344579999764422 12455
Q ss_pred HHhhhhhcCCCeEEEeccCcccc
Q 036498 100 LLLLYKIKYPDNFFLLRGNHECA 122 (294)
Q Consensus 100 ~l~~l~~~~~~~v~~lrGNHE~~ 122 (294)
++-.+.. =....||||.-
T Consensus 196 amN~LGy-----DA~tLGNHEFD 213 (814)
T PRK11907 196 ALEALGF-----DAGTLGNHEFN 213 (814)
T ss_pred HHhccCC-----CEEEechhhcc
Confidence 5554442 35778999974
No 122
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=78.82 E-value=14 Score=31.74 Aligned_cols=85 Identities=15% Similarity=0.224 Sum_probs=61.1
Q ss_pred CceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHH----------------HHhhccChHH
Q 036498 79 SNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYD----------------ECKRRFSVRL 142 (294)
Q Consensus 79 ~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~----------------~~~~~~~~~~ 142 (294)
..+|++| .|-+.-|++.++..++..+.++-+. .|+-|.|..+....|.. |....+-..+
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 4577777 5888999999999999888887665 89999998876554422 2222233456
Q ss_pred HhHHhhhhccchheeeecCceEEecC
Q 036498 143 WKHFTECFNCLPVAAVIDDKILCMHG 168 (294)
Q Consensus 143 ~~~~~~~~~~lP~~~~i~~~~l~vHg 168 (294)
|..+...+.++++...+-..++.+-|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 66777777788888777667777776
No 123
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=78.35 E-value=1.3 Score=42.78 Aligned_cols=55 Identities=27% Similarity=0.381 Sum_probs=38.6
Q ss_pred HHHHHHHHHhcCCc----eEeecceeecc--Ccc-ccCCccEEEE---eccCCCcccccCceeEEE
Q 036498 223 ADKVAEFLNKQDLD----LICRAHQVVED--GFE-FFADRRLVTI---FSAPNYCGEFNNAGAFMC 278 (294)
Q Consensus 223 ~~~~~~fl~~~g~~----~iIrgH~~~~~--G~~-~~~~~~viti---fSa~~y~~~~~n~ga~l~ 278 (294)
++..++.|+..|++ .||-||+|+.. |-. ...|||+|.| ||-. |....+=+|-.+.
T Consensus 515 e~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFskA-Yqs~TgiAGYTll 579 (648)
T COG3855 515 EEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSKA-YQSTTGIAGYTLL 579 (648)
T ss_pred HHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhhh-hhcccccceeEee
Confidence 34567899999987 89999999875 333 3588999988 4443 6665555555443
No 124
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=76.79 E-value=5.1 Score=36.34 Aligned_cols=94 Identities=19% Similarity=0.235 Sum_probs=55.6
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCceeee---------cCCeeEeeccccChhhHHHHHHhCCCCCCCceeeeccccccccc
Q 036498 23 QMNESEIRQLCFTAKQIFLAQPNLLEL---------EAPINICGDIHGQYPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQ 93 (294)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~ep~~~~~---------~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~ 93 (294)
+++.+....-.+-++..-.=+|++-.+ ..+.+.|+|.|+-..... ..++-|.++.+||+-.-|.
T Consensus 25 ~~ssnpt~a~~~~~~~q~~~kp~vkpi~~~ap~~~~~~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~- 97 (305)
T KOG3947|consen 25 EYSSNPTQAFTFYNKNQRRFKPPVKPIRLDAPVGPGYARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL- 97 (305)
T ss_pred CcCCChHHHHHHHHHhcCcccCCCCCcCCCCCCCCCceEEEEecCcccccCccc------cCCCCceEEeccCCccccC-
Confidence 455666555555555444444543232 136899999999655543 2455666788999987554
Q ss_pred hHHHHHHHhhhhhcCC-CeEEEeccCcccccc
Q 036498 94 SIETICLLLLYKIKYP-DNFFLLRGNHECASI 124 (294)
Q Consensus 94 s~evl~~l~~l~~~~~-~~v~~lrGNHE~~~~ 124 (294)
+-||..+=..+- ..| +.=+.|+||||.-.-
T Consensus 98 ~~ev~~fn~~~g-slph~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 98 PEEVIKFNEWLG-SLPHEYKIVIAGNHELTFD 128 (305)
T ss_pred HHHHHhhhHHhc-cCcceeeEEEeeccceeec
Confidence 445544322221 122 245789999998543
No 125
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=75.48 E-value=2.8 Score=41.92 Aligned_cols=65 Identities=18% Similarity=0.028 Sum_probs=35.9
Q ss_pred eeEeeccccChhhH---------------------HHHHHhCCC-CCCCceeeeccccccccch-----HHHHHHHhhhh
Q 036498 53 INICGDIHGQYPDL---------------------LRLFEYGGF-PPDSNYLFLGDYVDRGKQS-----IETICLLLLYK 105 (294)
Q Consensus 53 i~viGDIHG~~~~l---------------------~~~l~~~~~-~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~ 105 (294)
|.-+.|+||++... ..+++...- .++..++..||.+...+.+ ...++++-++.
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g 82 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG 82 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC
Confidence 56678899886543 233333221 1333445579999754432 22334443333
Q ss_pred hcCCCeEEEeccCcccc
Q 036498 106 IKYPDNFFLLRGNHECA 122 (294)
Q Consensus 106 ~~~~~~v~~lrGNHE~~ 122 (294)
-=.+..||||.-
T Consensus 83 -----~Da~~lGNHEFd 94 (550)
T TIGR01530 83 -----FDFFTLGNHEFD 94 (550)
T ss_pred -----CCEEEecccccc
Confidence 235788999974
No 126
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=75.10 E-value=3.6 Score=39.38 Aligned_cols=72 Identities=8% Similarity=-0.003 Sum_probs=40.5
Q ss_pred CCeeEeeccccChhhHHHH---HHhCC-CCCCCceeeeccccccccchH------HHHHHHhhhhh-cCCCeEEEeccCc
Q 036498 51 APINICGDIHGQYPDLLRL---FEYGG-FPPDSNYLFLGDYVDRGKQSI------ETICLLLLYKI-KYPDNFFLLRGNH 119 (294)
Q Consensus 51 ~~i~viGDIHG~~~~l~~~---l~~~~-~~~~~~~vfLGD~vDrG~~s~------evl~~l~~l~~-~~~~~v~~lrGNH 119 (294)
-+++++||-=+-...-..+ +.... -.+.+-+|-+||-++.|..++ +.++-++.-.. .-.-..++++|||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNH 106 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQA 106 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcc
Confidence 3699999965432222222 22221 223444667999988776643 33444443221 0123689999999
Q ss_pred ccc
Q 036498 120 ECA 122 (294)
Q Consensus 120 E~~ 122 (294)
|..
T Consensus 107 Dy~ 109 (394)
T PTZ00422 107 DWD 109 (394)
T ss_pred ccc
Confidence 973
No 127
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=70.86 E-value=4.4 Score=40.50 Aligned_cols=67 Identities=21% Similarity=0.063 Sum_probs=35.9
Q ss_pred CCeeEeeccccChhh----------HHHHHHhCC-----CCCCCceeeeccccccccch-----HHHHHHHhhhhhcCCC
Q 036498 51 APINICGDIHGQYPD----------LLRLFEYGG-----FPPDSNYLFLGDYVDRGKQS-----IETICLLLLYKIKYPD 110 (294)
Q Consensus 51 ~~i~viGDIHG~~~~----------l~~~l~~~~-----~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~~~~~~ 110 (294)
-.|.-++|+||++.. +..+++... ..++.-++.-||.+...+.+ ..+++++-.+. -
T Consensus 35 ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g----~ 110 (551)
T PRK09558 35 ITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIG----Y 110 (551)
T ss_pred EEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCC----C
Confidence 458889999998752 223333322 12233344579998643322 12333343333 1
Q ss_pred eEEEeccCcccc
Q 036498 111 NFFLLRGNHECA 122 (294)
Q Consensus 111 ~v~~lrGNHE~~ 122 (294)
.+ +..||||.-
T Consensus 111 Da-~tlGNHEFD 121 (551)
T PRK09558 111 DA-MAVGNHEFD 121 (551)
T ss_pred CE-EcccccccC
Confidence 23 445999974
No 128
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=69.84 E-value=9.1 Score=37.97 Aligned_cols=49 Identities=20% Similarity=0.186 Sum_probs=35.6
Q ss_pred CCeeEeecccc------------ChhhHHHHHHhCCCCCCCceeeeccccccccchHHHHH
Q 036498 51 APINICGDIHG------------QYPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETIC 99 (294)
Q Consensus 51 ~~i~viGDIHG------------~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~ 99 (294)
-+|.|-.|+|= .+..|+.+|..+.-...|-++.-||+++-..-|.++|.
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~ 74 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLH 74 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHH
Confidence 36888899882 37788999988766666666667999987666655543
No 129
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=67.58 E-value=5.5 Score=41.63 Aligned_cols=67 Identities=22% Similarity=0.120 Sum_probs=38.3
Q ss_pred cCCeeEeeccccChhh----------------HHHHHHhCCCC-CCCceeeeccccccccch------------------
Q 036498 50 EAPINICGDIHGQYPD----------------LLRLFEYGGFP-PDSNYLFLGDYVDRGKQS------------------ 94 (294)
Q Consensus 50 ~~~i~viGDIHG~~~~----------------l~~~l~~~~~~-~~~~~vfLGD~vDrG~~s------------------ 94 (294)
.-+|+-.+|+||++.. +..++++..-. ++..+|-.||++..-+.+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 4568999999999643 22333333211 233444579998543321
Q ss_pred -HHHHHHHhhhhhcCCCeEEEeccCccc
Q 036498 95 -IETICLLLLYKIKYPDNFFLLRGNHEC 121 (294)
Q Consensus 95 -~evl~~l~~l~~~~~~~v~~lrGNHE~ 121 (294)
..++.++-.+.. =....||||.
T Consensus 119 ~~p~i~~mN~lgy-----Da~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMKY-----DVISLGNHEF 141 (780)
T ss_pred chHHHHHHhccCC-----CEEecccccc
Confidence 234455544442 2477899996
No 130
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=65.62 E-value=18 Score=33.17 Aligned_cols=73 Identities=15% Similarity=0.232 Sum_probs=47.5
Q ss_pred CCeeEeecccc----ChhhHHHHHHhCC-CCC----CCceeeeccccccc----cch----HHHHHHHhhh-hhcCC---
Q 036498 51 APINICGDIHG----QYPDLLRLFEYGG-FPP----DSNYLFLGDYVDRG----KQS----IETICLLLLY-KIKYP--- 109 (294)
Q Consensus 51 ~~i~viGDIHG----~~~~l~~~l~~~~-~~~----~~~~vfLGD~vDrG----~~s----~evl~~l~~l-~~~~~--- 109 (294)
.+++|+||+|= .+++|.++|+... ..+ ...+|++|+++.+. ..+ .+-++-+..+ ...+|
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 35899999994 4788888888762 212 34688999999763 111 2333333331 22333
Q ss_pred --CeEEEeccCccccc
Q 036498 110 --DNFFLLRGNHECAS 123 (294)
Q Consensus 110 --~~v~~lrGNHE~~~ 123 (294)
.++++|+|-.|-+.
T Consensus 108 ~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 108 EHCYLIFIPGINDPCA 123 (291)
T ss_pred hcCeEEEECCCCCCCc
Confidence 58999999999864
No 131
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=63.20 E-value=5.7 Score=40.01 Aligned_cols=40 Identities=25% Similarity=0.394 Sum_probs=33.2
Q ss_pred ceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccc
Q 036498 80 NYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASI 124 (294)
Q Consensus 80 ~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~ 124 (294)
++-.+||+.||||.+-.+++.|+..- +|-+--||||.-.+
T Consensus 187 hLHIvGDIyDRGp~pd~ImD~Lm~~h-----svDIQWGNHDIlWM 226 (640)
T PF06874_consen 187 HLHIVGDIYDRGPRPDKIMDRLMNYH-----SVDIQWGNHDILWM 226 (640)
T ss_pred heeecccccCCCCChhHHHHHHhcCC-----CccccccchHHHHH
Confidence 45578999999999999999887543 57888999999655
No 132
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=60.71 E-value=1.1 Score=42.60 Aligned_cols=195 Identities=12% Similarity=-0.121 Sum_probs=104.5
Q ss_pred CCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccchhhhchHHHHhhcc----ChHHHhHHhhhhccc
Q 036498 78 DSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRF----SVRLWKHFTECFNCL 153 (294)
Q Consensus 78 ~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l 153 (294)
.-..|++++..+++.+.+..+.+-+..+..+..+.-..++||+..... ++++.-.. ...+++..++-++..
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~~~~-----R~~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDSSFK-----RRYLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCcchh-----hhheeecccccCceEEEEeccCcCccc
Confidence 345788999999999999999988888888888888999999554322 22221111 123345555656666
Q ss_pred hheeeecCceEEecCCCCcCCCChHHHhcccCCC--CCC-CccceeeeeccCCCCCCCCCCcCCCcceeeeCHHH--HHH
Q 036498 154 PVAAVIDDKILCMHGGLSPEMESLDQIRAIQRPI--DVP-DQGLLCDLLWSDPDRDIRGWGENDRGVSYTFGADK--VAE 228 (294)
Q Consensus 154 P~~~~i~~~~l~vHgGi~~~~~~~~~i~~~~r~~--~~~-~~~~~~~llW~dp~~~~~~~~~~~rg~~~~fg~~~--~~~ 228 (294)
+...+.+ ++++.|++..|..........+.-.. +.. +.+--..++=++-.. ...|...+ ....||.+. --+
T Consensus 123 l~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~lGd~~gn~kg~f~llD~~~~~-k~tw~~~~--~~p~~gyDfwyqpr 198 (476)
T KOG0918|consen 123 LEKTIDP-DILEKTGLACPHTSHCLASGNVMVSCLGDAEGNAKGGFLLLDSDFNE-KGTWEKPG--HSPLFGYDFWYQPR 198 (476)
T ss_pred eeeeech-hhHhhcCCcCCcccccccCCCeeEEeecccccCCcCCeEEecCccce-ecccccCC--Cccccccceeeccc
Confidence 7776644 89999999999765333222211000 000 111111122111111 11222211 111222211 112
Q ss_pred HHHhcCCceEeecceeeccCccccCCccEEEEeccCCCcccccCceeEEEecCce
Q 036498 229 FLNKQDLDLICRAHQVVEDGFEFFADRRLVTIFSAPNYCGEFNNAGAFMCVDASL 283 (294)
Q Consensus 229 fl~~~g~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~~~~~n~ga~l~i~~~~ 283 (294)
+....+.+-..+-|.-...+...+.++ ++.++.+-|.-..++.+..+.+..+.
T Consensus 199 ~~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~g 251 (476)
T KOG0918|consen 199 HNVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDTG 251 (476)
T ss_pred cceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCCC
Confidence 223333444445555443333444554 67777777766677788888887653
No 133
>PF14164 YqzH: YqzH-like protein
Probab=59.97 E-value=26 Score=24.52 Aligned_cols=42 Identities=14% Similarity=0.228 Sum_probs=36.7
Q ss_pred hHHHHHHHHcccCCCCcccccCHHHHHHHHHHHHHHHhcCCc
Q 036498 4 LEGLLERLLEGRYNRGKRIQMNESEIRQLCFTAKQIFLAQPN 45 (294)
Q Consensus 4 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ep~ 45 (294)
|..+|.+.++....+...-+|+..+...|+........++|.
T Consensus 6 I~Kmi~~~l~QYg~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 6 IEKMIINCLRQYGYDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred HHHHHHHHHHHhCCcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 777888888877777788899999999999999999999885
No 134
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=58.64 E-value=7.2 Score=35.48 Aligned_cols=71 Identities=18% Similarity=0.237 Sum_probs=41.4
Q ss_pred CCeeEeecc--ccChhhHHHHHHhCCCC---CCCceeeecccc-ccccchHH------HHHHHhhhhhcCCCeEEEeccC
Q 036498 51 APINICGDI--HGQYPDLLRLFEYGGFP---PDSNYLFLGDYV-DRGKQSIE------TICLLLLYKIKYPDNFFLLRGN 118 (294)
Q Consensus 51 ~~i~viGDI--HG~~~~l~~~l~~~~~~---~~~~~vfLGD~v-DrG~~s~e------vl~~l~~l~~~~~~~v~~lrGN 118 (294)
-++.||||- +|.+..-+..+++.... +.+-+|-+||=+ |-|..+.- .++=++.-..+ .+..+.|.||
T Consensus 44 lsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSL-QkpWy~vlGN 122 (336)
T KOG2679|consen 44 LSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSL-QKPWYSVLGN 122 (336)
T ss_pred eEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCccc-ccchhhhccC
Confidence 369999995 67777766666653332 223455689977 45544321 11112211111 1358999999
Q ss_pred cccc
Q 036498 119 HECA 122 (294)
Q Consensus 119 HE~~ 122 (294)
||.+
T Consensus 123 HDyr 126 (336)
T KOG2679|consen 123 HDYR 126 (336)
T ss_pred cccc
Confidence 9986
No 135
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=55.49 E-value=44 Score=27.79 Aligned_cols=59 Identities=19% Similarity=0.255 Sum_probs=41.0
Q ss_pred eEeeccccChhhHHHHHH-hCCC------------CCCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEe
Q 036498 54 NICGDIHGQYPDLLRLFE-YGGF------------PPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLL 115 (294)
Q Consensus 54 ~viGDIHG~~~~l~~~l~-~~~~------------~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~l 115 (294)
++.+=.+||-..+-+.+. .++- .+..++||+|=.+|+|.-+-++..+|..|+ +++|++.
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~lF 73 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVALF 73 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEEE
Confidence 566667888777755443 2222 234579999999999999999999887765 4555443
No 136
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=53.61 E-value=48 Score=24.17 Aligned_cols=74 Identities=14% Similarity=0.043 Sum_probs=46.0
Q ss_pred eeeecCCeeEeeccccChhhHHHHHHhCCC--CCCCceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCc
Q 036498 46 LLELEAPINICGDIHGQYPDLLRLFEYGGF--PPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNH 119 (294)
Q Consensus 46 ~~~~~~~i~viGDIHG~~~~l~~~l~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNH 119 (294)
++.....+.||=|---|.+++..+++.+.- +....++.+|+.-|.|....+....+-.+...+...+++...|+
T Consensus 7 ~v~~~~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 7 VVREPNGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp EEEEETTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred EEeeCCCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 444455688888977788888888776532 34455667899999777776655555555544555655554443
No 137
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=51.67 E-value=25 Score=34.33 Aligned_cols=40 Identities=25% Similarity=0.375 Sum_probs=31.4
Q ss_pred ceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccccc
Q 036498 80 NYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECASI 124 (294)
Q Consensus 80 ~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~~~ 124 (294)
.+=.+||+-||||++-.+++-|...- .+-+--||||.-.+
T Consensus 193 hLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWm 232 (648)
T COG3855 193 HLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWM 232 (648)
T ss_pred heeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEe
Confidence 45578999999999999888775443 46677899998555
No 138
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=34.44 E-value=1.1e+02 Score=29.71 Aligned_cols=67 Identities=12% Similarity=0.018 Sum_probs=45.6
Q ss_pred cCCeeEeecccc-ChhhHHHHHHhCCCCCCCceeeeccccccccchHHHHHHHhhhhhcC-CCeEEEecc
Q 036498 50 EAPINICGDIHG-QYPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLLLYKIKY-PDNFFLLRG 117 (294)
Q Consensus 50 ~~~i~viGDIHG-~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~-~~~v~~lrG 117 (294)
...+.||=|-+. +.++++++|+.+...+..+++.+||+..-|+.+.+.-.-+-...... .+.++++ |
T Consensus 324 ~~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 324 AEGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 356888999665 57888888876653344568889999999999988765554443333 3445444 5
No 139
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=33.71 E-value=25 Score=28.32 Aligned_cols=21 Identities=19% Similarity=0.379 Sum_probs=19.3
Q ss_pred ccccChhhHHHHHHhCCCCCC
Q 036498 58 DIHGQYPDLLRLFEYGGFPPD 78 (294)
Q Consensus 58 DIHG~~~~l~~~l~~~~~~~~ 78 (294)
|+.|++..|++.|+.+++|..
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~ 21 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDE 21 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCc
Confidence 899999999999999999844
No 140
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=31.88 E-value=67 Score=28.39 Aligned_cols=40 Identities=23% Similarity=0.346 Sum_probs=29.6
Q ss_pred HHHHHHhcCCceEeecceeeccCccccCCccEEEEeccCCCc
Q 036498 226 VAEFLNKQDLDLICRAHQVVEDGFEFFADRRLVTIFSAPNYC 267 (294)
Q Consensus 226 ~~~fl~~~g~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~ 267 (294)
+.+.+-..|+|.||-+|..+..|++.+.+ ++| +||--|+.
T Consensus 208 ~a~~lidaGaDiIiG~HpHv~q~~E~y~~-~~I-~YSLGNfi 247 (250)
T PF09587_consen 208 LARALIDAGADIIIGHHPHVIQPVEIYKG-KPI-FYSLGNFI 247 (250)
T ss_pred HHHHHHHcCCCEEEeCCCCcccceEEECC-EEE-EEeCcccc
Confidence 44444457999999999999999998744 444 67776654
No 141
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=29.37 E-value=3.6e+02 Score=22.95 Aligned_cols=78 Identities=19% Similarity=0.262 Sum_probs=57.7
Q ss_pred cccccCHHHHHHHHHHHHHHHhcCCceeeecCCeeEeeccccChhhHHHHHHhCCCCC----------------------
Q 036498 20 KRIQMNESEIRQLCFTAKQIFLAQPNLLELEAPINICGDIHGQYPDLLRLFEYGGFPP---------------------- 77 (294)
Q Consensus 20 ~~~~~~~~~~~~l~~~~~~~~~~ep~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~---------------------- 77 (294)
+.+.++++++.+-+.+..+.+.++.. ....++||=++|++--+-.++..+.++.
T Consensus 8 ~evLisee~I~~ri~ela~~I~~~y~----g~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i 83 (178)
T COG0634 8 KEVLISEEQIKARIKELAAQITEDYG----GKDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKI 83 (178)
T ss_pred ceEeeCHHHHHHHHHHHHHHHHHhhC----CCceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEE
Confidence 34578999999999999988887542 2678899999999887777777665432
Q ss_pred ---------CCceeeeccccccccchHHHHHHH
Q 036498 78 ---------DSNYLFLGDYVDRGKQSIETICLL 101 (294)
Q Consensus 78 ---------~~~~vfLGD~vDrG~~s~evl~~l 101 (294)
..+++.+=|++|-|.--..+.+++
T Consensus 84 ~kDld~di~grdVLiVeDIiDsG~TLs~i~~~l 116 (178)
T COG0634 84 LKDLDEDIKGRDVLIVEDIIDSGLTLSKVRDLL 116 (178)
T ss_pred ecccccCCCCCeEEEEecccccChhHHHHHHHH
Confidence 135778999999887555555444
No 142
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=28.69 E-value=49 Score=30.00 Aligned_cols=39 Identities=31% Similarity=0.539 Sum_probs=24.5
Q ss_pred ceeeecccccc-ccchHHHHHHHhhhhhcCCCeEEEeccCcccc
Q 036498 80 NYLFLGDYVDR-GKQSIETICLLLLYKIKYPDNFFLLRGNHECA 122 (294)
Q Consensus 80 ~~vfLGD~vDr-G~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~ 122 (294)
+++|+||++.+ |..-+. ..|-.++.+++.. ++..|=|..
T Consensus 2 ~ilfiGDi~G~~Gr~~l~--~~L~~lk~~~~~D--~vIaNgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGKAGRKIVK--NNLPQLKSKYQAD--LVIANGENT 41 (266)
T ss_pred eEEEEEecCCHHHHHHHH--HHHHHHHHhCCCC--EEEEcCccc
Confidence 57899999965 333333 4566677666655 455566664
No 143
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=27.58 E-value=58 Score=29.26 Aligned_cols=10 Identities=40% Similarity=0.713 Sum_probs=4.7
Q ss_pred eeEeeccccC
Q 036498 53 INICGDIHGQ 62 (294)
Q Consensus 53 i~viGDIHG~ 62 (294)
+.++|||=|.
T Consensus 3 iLfiGDvvGk 12 (266)
T COG1692 3 ILFIGDVVGK 12 (266)
T ss_pred EEEEecccCc
Confidence 4445555443
No 144
>PLN00084 photosystem II subunit S (PsbS); Provisional
Probab=26.92 E-value=35 Score=28.65 Aligned_cols=36 Identities=31% Similarity=0.458 Sum_probs=23.9
Q ss_pred eccccccccchHHHHHHHhhhh-------hcCCCeEEEeccCcc
Q 036498 84 LGDYVDRGKQSIETICLLLLYK-------IKYPDNFFLLRGNHE 120 (294)
Q Consensus 84 LGD~vDrG~~s~evl~~l~~l~-------~~~~~~v~~lrGNHE 120 (294)
+||.+.||..++|-|.-=.... +-+|+++.+++ ||=
T Consensus 9 vgdvvtrg~gp~eql~de~~~igahassvlfhpprftlv~-nhv 51 (214)
T PLN00084 9 VGDVVTRGAGPLEQLRDEEMFIGAHASSVLFHPPRFTLVM-NHI 51 (214)
T ss_pred hhhhhccCCCcHHHhhhhHHHhhhcccccccCCccchhhh-ccC
Confidence 6999999999998765422222 23566666654 773
No 145
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.89 E-value=39 Score=31.52 Aligned_cols=29 Identities=24% Similarity=0.359 Sum_probs=21.5
Q ss_pred HhcCCceeeecCCeeEeeccc-cChhhHHH
Q 036498 40 FLAQPNLLELEAPINICGDIH-GQYPDLLR 68 (294)
Q Consensus 40 ~~~ep~~~~~~~~i~viGDIH-G~~~~l~~ 68 (294)
++.-|..++-.+.+.++||.| ||+.++..
T Consensus 46 ~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~ 75 (410)
T COG4320 46 MKTWPWSLPKTPFTWLCGDAHLGNFGAARN 75 (410)
T ss_pred HhcCccccCCCCceEEecccccccchhhcc
Confidence 344455566667899999999 88888753
No 146
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=25.76 E-value=69 Score=28.76 Aligned_cols=40 Identities=30% Similarity=0.394 Sum_probs=25.0
Q ss_pred ceeeeccccccccchHHHHHHHhhhhhcCCCeEEEeccCcccc
Q 036498 80 NYLFLGDYVDRGKQSIETICLLLLYKIKYPDNFFLLRGNHECA 122 (294)
Q Consensus 80 ~~vfLGD~vDrG~~s~evl~~l~~l~~~~~~~v~~lrGNHE~~ 122 (294)
+++|+||+|.+.-.. .+-..|-.++.+++..+++ -|=|..
T Consensus 1 ~ilfigdi~g~~G~~-~~~~~l~~lk~~~~~D~vi--~NgEn~ 40 (255)
T cd07382 1 KILFIGDIVGKPGRK-AVKEHLPKLKKEYKIDFVI--ANGENA 40 (255)
T ss_pred CEEEEEeCCCHHHHH-HHHHHHHHHHHHCCCCEEE--ECCccc
Confidence 478999999875432 2335667777777655444 455553
No 147
>PF02609 Exonuc_VII_S: Exonuclease VII small subunit; InterPro: IPR003761 Exonuclease VII is composed of two non-identical subunits; one large subunit and 4 small ones []. This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield nucleoside 5'-phosphates.; GO: 0008855 exodeoxyribonuclease VII activity, 0006308 DNA catabolic process, 0009318 exodeoxyribonuclease VII complex; PDB: 1VP7_F.
Probab=25.68 E-value=90 Score=20.64 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=25.1
Q ss_pred CchHHHHHHHHcccCCCCcccccCHHHHHHHHHHHHHHHhcC
Q 036498 2 EGLEGLLERLLEGRYNRGKRIQMNESEIRQLCFTAKQIFLAQ 43 (294)
Q Consensus 2 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e 43 (294)
+.|+.+++++-+. .++-++..++.+++..+++.-
T Consensus 6 ~~Le~Iv~~Le~~--------~~sLdes~~lyeeg~~l~~~c 39 (53)
T PF02609_consen 6 ERLEEIVEKLESG--------ELSLDESLKLYEEGMELIKKC 39 (53)
T ss_dssp HHHHHHHHHHHTT---------S-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHHH
Confidence 4577778877764 478889999999998887753
No 148
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=25.60 E-value=55 Score=29.21 Aligned_cols=60 Identities=23% Similarity=0.233 Sum_probs=31.7
Q ss_pred CCeEEEeccCcccccchhhhchHHHHhhccChHHHhHHhhhhccchheeeec-CceEEecCCCCcC
Q 036498 109 PDNFFLLRGNHECASINRIYGFYDECKRRFSVRLWKHFTECFNCLPVAAVID-DKILCMHGGLSPE 173 (294)
Q Consensus 109 ~~~v~~lrGNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~~~ 173 (294)
.++|++|-||||.-. ++.|.-.-...+-..++.|. .+..+|.+-.-. .+++..|-||-.+
T Consensus 127 nknvvvlagnhein~-ngny~arlanhkls~gDTYn----lIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 127 NKNVVVLAGNHEINF-NGNYMARLANHKLSAGDTYN----LIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred ccceEEEecCceecc-CchHHHHHhhCCCCccchhh----ccccccccccCcchhhhhcccCceec
Confidence 358999999999853 32221111111111233333 245566654422 2688888888643
No 149
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=24.41 E-value=2.4e+02 Score=26.87 Aligned_cols=66 Identities=20% Similarity=0.197 Sum_probs=41.5
Q ss_pred cCCeeEeeccc-cChhhHHHHHHhCCCCCCCceeeeccccccccchHHHHHHHhhhhhcCC-CeEEEe
Q 036498 50 EAPINICGDIH-GQYPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYP-DNFFLL 115 (294)
Q Consensus 50 ~~~i~viGDIH-G~~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~-~~v~~l 115 (294)
...+.+|=|-+ .+.+++.++|+.+...+...++.+|+...-|+.+.+.-..+-....... +.+++.
T Consensus 295 ~~~~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~d~vi~~ 362 (417)
T TIGR01143 295 KNGLTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLVFLV 362 (417)
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 34678888855 4889999888876533334577899998777777654444333332333 444444
No 150
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=22.54 E-value=1.3e+02 Score=26.38 Aligned_cols=38 Identities=21% Similarity=0.348 Sum_probs=27.5
Q ss_pred HHHHhcCCceEeecceeeccCccccCCccEEEEeccCCCc
Q 036498 228 EFLNKQDLDLICRAHQVVEDGFEFFADRRLVTIFSAPNYC 267 (294)
Q Consensus 228 ~fl~~~g~~~iIrgH~~~~~G~~~~~~~~vitifSa~~y~ 267 (294)
+.+-..|+|.||-||+-+..+++... +++| +||=-|+.
T Consensus 199 ~~l~~~G~DvIiG~H~H~~~~~e~~~-~~~I-~YslGNfi 236 (239)
T smart00854 199 HALIDAGADVVIGHHPHVLQPIEIYK-GKLI-AYSLGNFI 236 (239)
T ss_pred HHHHHcCCCEEEcCCCCcCCceEEEC-CEEE-EEcccccc
Confidence 33334699999999999888988754 4555 67766653
No 151
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=22.07 E-value=1.2e+02 Score=22.55 Aligned_cols=23 Identities=26% Similarity=0.329 Sum_probs=16.1
Q ss_pred cCCeeEeeccc-cChhhHHHHHHh
Q 036498 50 EAPINICGDIH-GQYPDLLRLFEY 72 (294)
Q Consensus 50 ~~~i~viGDIH-G~~~~l~~~l~~ 72 (294)
..|-++|||-| |.+++|.++-+.
T Consensus 60 tvPQIFi~~~~iGg~ddl~~l~e~ 83 (92)
T cd03030 60 LPPQIFNGDEYCGDYEAFFEAKEN 83 (92)
T ss_pred CCCEEEECCEEeeCHHHHHHHHhC
Confidence 45667788888 888888776543
No 152
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=21.77 E-value=1.3e+02 Score=30.26 Aligned_cols=46 Identities=26% Similarity=0.338 Sum_probs=28.8
Q ss_pred ceeeeccccc--cccchH----HHHHHHhhhh-hcCCC-eEEEeccCcccccch
Q 036498 80 NYLFLGDYVD--RGKQSI----ETICLLLLYK-IKYPD-NFFLLRGNHECASIN 125 (294)
Q Consensus 80 ~~vfLGD~vD--rG~~s~----evl~~l~~l~-~~~~~-~v~~lrGNHE~~~~~ 125 (294)
-++..||.+. +++++. +++..+..+. ..+|+ .|+...||||..-.+
T Consensus 213 ~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N 266 (577)
T KOG3770|consen 213 YIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVN 266 (577)
T ss_pred EEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHh
Confidence 3456999994 555543 3333333322 33555 799999999997665
No 153
>PF14695 LINES_C: Lines C-terminus
Probab=21.07 E-value=1.7e+02 Score=18.39 Aligned_cols=31 Identities=23% Similarity=0.216 Sum_probs=23.9
Q ss_pred chHHHHHHHHcccCCCCcccccCHHHHHHHHHHHHH
Q 036498 3 GLEGLLERLLEGRYNRGKRIQMNESEIRQLCFTAKQ 38 (294)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 38 (294)
.|+..|+++.+.. .++.+++.++++++...+
T Consensus 8 ~L~~aI~rL~~k~-----LFPYN~~pLLrlL~~~e~ 38 (39)
T PF14695_consen 8 RLRLAIERLVRKN-----LFPYNPSPLLRLLEQVES 38 (39)
T ss_pred HHHHHHHHHHHCC-----CCCCChHHHHHHHHHhhc
Confidence 4677788888754 778899999999887643
No 154
>KOG3818 consensus DNA polymerase epsilon, subunit B [Replication, recombination and repair]
Probab=20.66 E-value=2.7e+02 Score=27.26 Aligned_cols=76 Identities=14% Similarity=0.187 Sum_probs=50.4
Q ss_pred cCCeeEeeccccC----hhhHHHHHHhCCCCCCCceeeeccccccccchHHH------HHHHhhh-----hhcCCCeEEE
Q 036498 50 EAPINICGDIHGQ----YPDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSIET------ICLLLLY-----KIKYPDNFFL 114 (294)
Q Consensus 50 ~~~i~viGDIHG~----~~~l~~~l~~~~~~~~~~~vfLGD~vDrG~~s~ev------l~~l~~l-----~~~~~~~v~~ 114 (294)
+..+++++|+|=+ +.+|.++|....-.+...+|+.|.+..+.-+.-+. +..|.+. +......+++
T Consensus 282 d~~fVfLSdV~LD~~~vm~aL~kifqgy~~~pP~~iIlcG~FtS~p~~~~s~~~~k~~f~~LA~~l~~~~~~~ekT~fIF 361 (525)
T KOG3818|consen 282 DTSFVFLSDVFLDDKKVMEALRKIFQGYKDAPPTAIILCGSFTSSPRQTSSSDQLKDGFRWLAAQLTCFRKDYEKTQFIF 361 (525)
T ss_pred CceEEEEehhccccHHHHHHHHHHHhhccCCCCeEEEEeccccccccccchHHHHHHHHHHHHhhccccccccccceEEE
Confidence 4568888999876 56677777777777788899999999754322122 2222222 1112347999
Q ss_pred eccCcccccch
Q 036498 115 LRGNHECASIN 125 (294)
Q Consensus 115 lrGNHE~~~~~ 125 (294)
|+|-.|-+.-+
T Consensus 362 VPGP~Dp~~~~ 372 (525)
T KOG3818|consen 362 VPGPNDPWVDN 372 (525)
T ss_pred ecCCCCCCcCc
Confidence 99999987654
No 155
>PF04263 TPK_catalytic: Thiamin pyrophosphokinase, catalytic domain; InterPro: IPR007371 Thiamin pyrophosphokinase (TPK, 2.7.6.2 from EC) catalyzes the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamin) to form the coenzyme thiamin pyrophosphate (TPP). Thus, TPK is important for the formation of a coenzyme required for central metabolic functions. The structure of thiamin pyrophosphokinase suggests that the enzyme may operate by a mechanism of pyrophosphoryl transfer similar to those described for pyrophosphokinases functioning in nucleotide biosynthesis [].; GO: 0004788 thiamine diphosphokinase activity, 0005524 ATP binding, 0009229 thiamine diphosphate biosynthetic process; PDB: 2F17_B 1IG3_B 3S4Y_B 2OMK_B 1IG0_A 3MEL_B 3CQ9_A 3LM8_B 3K94_B 3L8M_B ....
Probab=20.45 E-value=1.3e+02 Score=23.81 Aligned_cols=63 Identities=25% Similarity=0.394 Sum_probs=35.9
Q ss_pred CeeEeeccccChhhHHHHHHhCC----------------------CCCCCceeeeccccccccchHHHHHHHhhhhhcCC
Q 036498 52 PINICGDIHGQYPDLLRLFEYGG----------------------FPPDSNYLFLGDYVDRGKQSIETICLLLLYKIKYP 109 (294)
Q Consensus 52 ~i~viGDIHG~~~~l~~~l~~~~----------------------~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~~ 109 (294)
|-++|||...--....+.++..+ ......++++|-.=.|-++.+..+.++...+ ...
T Consensus 37 Pd~iiGDfDSi~~~~~~~~~~~~~~~~~~p~kD~TD~e~Al~~~~~~~~~~i~v~Ga~GgR~DH~lanl~~l~~~~-~~~ 115 (123)
T PF04263_consen 37 PDLIIGDFDSISPEVLEFYKSKGVEIIHFPEKDYTDLEKALEYAIEQGPDEIIVLGALGGRFDHTLANLNLLYKYK-KRG 115 (123)
T ss_dssp -SEEEC-SSSS-HHHHHHHHHCTTEEEEE-STTS-HHHHHHHHHHHTTTSEEEEES-SSSSHHHHHHHHHHHHHHH-TTT
T ss_pred CCEEEecCCCCChHHHHHHHhhccceecccccccCHHHHHHHHHHHCCCCEEEEEecCCCcHHHHHHHHHHHHHHH-HcC
Confidence 45666666665555555444332 1234467778888888888888888877665 233
Q ss_pred CeEEEe
Q 036498 110 DNFFLL 115 (294)
Q Consensus 110 ~~v~~l 115 (294)
-+++++
T Consensus 116 ~~i~li 121 (123)
T PF04263_consen 116 IKIVLI 121 (123)
T ss_dssp SEEEEE
T ss_pred CeEEEE
Confidence 345443
No 156
>PLN02965 Probable pheophorbidase
Probab=20.42 E-value=2.8e+02 Score=23.96 Aligned_cols=21 Identities=14% Similarity=0.224 Sum_probs=17.1
Q ss_pred HHHHHHHHhcCC--ceEeeccee
Q 036498 224 DKVAEFLNKQDL--DLICRAHQV 244 (294)
Q Consensus 224 ~~~~~fl~~~g~--~~iIrgH~~ 244 (294)
+.+.++++..+. +.++.||+.
T Consensus 59 ~dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 59 RPLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred HHHHHHHHhcCCCCCEEEEecCc
Confidence 347789999875 799999986
Done!