Query 036502
Match_columns 367
No_of_seqs 273 out of 1685
Neff 6.7
Searched_HMMs 13730
Date Mon Mar 25 03:45:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036502.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036502hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2f69a1 b.76.2.1 (A:116-193) H 79.4 1.7 0.00013 30.7 5.3 46 142-187 1-49 (78)
2 d2f69a1 b.76.2.1 (A:116-193) H 69.4 4.9 0.00036 28.2 5.6 45 120-164 2-49 (78)
3 d2qqra2 b.34.9.1 (A:956-1011) 30.3 59 0.0043 21.1 5.5 16 8-23 9-24 (56)
4 d2g3ra1 b.34.9.1 (A:1485-1537) 14.7 1.1E+02 0.0078 18.9 4.0 26 12-37 13-38 (53)
5 d1a9xb1 c.8.3.1 (B:1502-1652) 11.3 1.8E+02 0.013 22.3 5.5 28 31-58 5-32 (151)
6 d1co4a_ g.47.1.1 (A:) Zinc dom 10.7 17 0.0013 22.4 -0.8 14 342-355 7-20 (42)
7 d1rwia_ b.68.9.1 (A:) Serine/t 8.4 4.3E+02 0.031 20.4 7.6 19 167-185 143-161 (260)
8 d1a9xb1 c.8.3.1 (B:1502-1652) 8.0 2.6E+02 0.019 21.4 5.2 29 53-81 4-32 (151)
9 d1rwia_ b.68.9.1 (A:) Serine/t 7.8 4.5E+02 0.033 20.2 8.9 17 53-69 102-118 (260)
10 d1o4ya_ b.29.1.2 (A:) beta-Aga 6.0 1.5E+02 0.011 24.2 2.9 41 308-365 197-237 (270)
No 1
>d2f69a1 b.76.2.1 (A:116-193) Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.38 E-value=1.7 Score=30.68 Aligned_cols=46 Identities=20% Similarity=0.343 Sum_probs=30.8
Q ss_pred eeeEEEEecCCcEEEEEEe-CCeEeEeEE-EEeCCCCE-EEEEEcCCee
Q 036502 142 SGRGVMKWMNGDIYDGSWL-NGYRHGSGV-YMFADGGH-YSGTWSKGLK 187 (367)
Q Consensus 142 ~G~G~~~~~nG~~y~G~w~-nG~~hG~G~-~~~~dG~~-y~G~w~~G~~ 187 (367)
||..-++++||-...|+.. +|.+.|.-+ |.|||+.+ +.|.|.+|..
T Consensus 1 ~G~Cw~y~pdGGslvG~vne~gEmtGd~IAYvYPD~~talyGsF~dgem 49 (78)
T d2f69a1 1 HGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEM 49 (78)
T ss_dssp CCCEEEECTTSCEEEECCCTTSCCCEEEEEEECTTSSEEEEEEEETTEE
T ss_pred CceeEEEeCCCCEEEeeecCCCccccceEEEEcCCCeEEEEEEeeccce
Confidence 4566677777777777764 366777665 55777754 7777777654
No 2
>d2f69a1 b.76.2.1 (A:116-193) Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.43 E-value=4.9 Score=28.23 Aligned_cols=45 Identities=20% Similarity=0.439 Sum_probs=28.1
Q ss_pred eeeEEEcCCCcEEEEEE-eCCCeeeeEE-EEecCCcE-EEEEEeCCeE
Q 036502 120 GSGRYSWNSGNIYIGSW-KDGKMSGRGV-MKWMNGDI-YDGSWLNGYR 164 (367)
Q Consensus 120 G~G~~~~~nG~~Y~G~f-~~g~~~G~G~-~~~~nG~~-y~G~w~nG~~ 164 (367)
|..-+++++|-...|+. .++.+.|.-+ +.|||+.. +.|.|.+|.+
T Consensus 2 G~Cw~y~pdGGslvG~vne~gEmtGd~IAYvYPD~~talyGsF~dgem 49 (78)
T d2f69a1 2 GVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEM 49 (78)
T ss_dssp CCEEEECTTSCEEEECCCTTSCCCEEEEEEECTTSSEEEEEEEETTEE
T ss_pred ceeEEEeCCCCEEEeeecCCCccccceEEEEcCCCeEEEEEEeeccce
Confidence 45556667766666665 3566676665 44677665 6677766543
No 3
>d2qqra2 b.34.9.1 (A:956-1011) Jumonji domain-containing protein 2A {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.25 E-value=59 Score=21.15 Aligned_cols=16 Identities=25% Similarity=0.623 Sum_probs=8.5
Q ss_pred EEEecCCCEEEEEEEC
Q 036502 8 KKSFTNGDIYVGNFEG 23 (367)
Q Consensus 8 ~~~~~nG~~Y~G~~~~ 23 (367)
...|+||.+|...|..
T Consensus 9 ~VrW~DG~~y~A~f~~ 24 (56)
T d2qqra2 9 QVRWTDGQVYGAKFVA 24 (56)
T ss_dssp EEECTTSCEEEEEEEE
T ss_pred EEEcCCCCEEEEEEEe
Confidence 4455555555555543
No 4
>d2g3ra1 b.34.9.1 (A:1485-1537) p53-binding protein 1, 53BP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.74 E-value=1.1e+02 Score=18.94 Aligned_cols=26 Identities=35% Similarity=0.629 Sum_probs=15.1
Q ss_pred cCCCEEEEEEECCeEeeEEEEEEcCC
Q 036502 12 TNGDIYVGNFEGELPHGKGKYIWLDG 37 (367)
Q Consensus 12 ~nG~~Y~G~~~~g~~~G~G~~~~~nG 37 (367)
+||-+|.|......-+|.=.+.|.||
T Consensus 13 sn~yfysg~i~rd~g~~r~rl~fdd~ 38 (53)
T d2g3ra1 13 SNGYFYSGKITRDVGAGKYKLLFDDG 38 (53)
T ss_dssp TTCCEEEEEEEEEEETTEEEEEETTS
T ss_pred cCCEEEeeEEehhcCCceEEEEecCC
Confidence 45556666666555555555555555
No 5
>d1a9xb1 c.8.3.1 (B:1502-1652) Carbamoyl phosphate synthetase, small subunit N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=11.28 E-value=1.8e+02 Score=22.26 Aligned_cols=28 Identities=21% Similarity=0.299 Sum_probs=12.9
Q ss_pred EEEEcCCcEEEEEEECCEEEeEEEEEeC
Q 036502 31 KYIWLDGTVYEGDWEEGKMTGKGYIVWP 58 (367)
Q Consensus 31 ~~~~~nG~~YeG~w~ng~~~G~G~~~~~ 58 (367)
.+...||.+|+|....-...-.|.+.|.
T Consensus 5 ~L~LedG~~f~G~~~g~~~~~~GE~vFn 32 (151)
T d1a9xb1 5 LLVLEDGTQFHGRAIGATGSAVGEVVFN 32 (151)
T ss_dssp EEEETTSCEEEEEECSCSEEEEEEEEEE
T ss_pred EEEeCCCCEEEEEecCCCcceeEEEEEE
Confidence 3444455555554444344444444443
No 6
>d1co4a_ g.47.1.1 (A:) Zinc domain conserved in yeast copper-regulated transcription factors {Synthetic}
Probab=10.68 E-value=17 Score=22.40 Aligned_cols=14 Identities=21% Similarity=0.499 Sum_probs=11.7
Q ss_pred hcccceeeecccce
Q 036502 342 KKKSCVDIFEGHRS 355 (367)
Q Consensus 342 ~~~~~~~i~~gh~s 355 (367)
.|=+||.-++||||
T Consensus 7 ~KyAC~~CIRGHRs 20 (42)
T d1co4a_ 7 VKYACDSCIKSHKA 20 (42)
T ss_dssp EEEEETTTTTTSGG
T ss_pred eeEeHhhhhCcccc
Confidence 46688999999997
No 7
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=8.37 E-value=4.3e+02 Score=20.40 Aligned_cols=19 Identities=21% Similarity=0.256 Sum_probs=11.3
Q ss_pred eEEEEeCCCCEEEEEEcCC
Q 036502 167 SGVYMFADGGHYSGTWSKG 185 (367)
Q Consensus 167 ~G~~~~~dG~~y~G~w~~G 185 (367)
.|+...++|..|...+.++
T Consensus 143 ~~i~~~~~g~~~v~~~~~~ 161 (260)
T d1rwia_ 143 DGVAVDNSGNVYVTDTDNN 161 (260)
T ss_dssp CEEEECTTCCEEEEEGGGT
T ss_pred ceeeecCCCCEeeeccccc
Confidence 3555566777766665443
No 8
>d1a9xb1 c.8.3.1 (B:1502-1652) Carbamoyl phosphate synthetase, small subunit N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=8.03 E-value=2.6e+02 Score=21.35 Aligned_cols=29 Identities=17% Similarity=0.212 Sum_probs=15.6
Q ss_pred EEEEeCCCCEEEEEEeCCEEeeEEEEEec
Q 036502 53 GYIVWPSGAKSEGDFSGGYLHGFGTFTGH 81 (367)
Q Consensus 53 G~~~~~~G~~Y~G~f~ng~~~G~G~~~~~ 81 (367)
..+...||.+|+|.--.....-.|.+.+.
T Consensus 4 a~L~LedG~~f~G~~~g~~~~~~GE~vFn 32 (151)
T d1a9xb1 4 ALLVLEDGTQFHGRAIGATGSAVGEVVFN 32 (151)
T ss_dssp EEEEETTSCEEEEEECSCSEEEEEEEEEE
T ss_pred EEEEeCCCCEEEEEecCCCcceeEEEEEE
Confidence 44556666666665554444444544443
No 9
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=7.77 E-value=4.5e+02 Score=20.21 Aligned_cols=17 Identities=29% Similarity=0.210 Sum_probs=9.2
Q ss_pred EEEEeCCCCEEEEEEeC
Q 036502 53 GYIVWPSGAKSEGDFSG 69 (367)
Q Consensus 53 G~~~~~~G~~Y~G~f~n 69 (367)
|+.+.++|..|.....+
T Consensus 102 ~iavd~~g~i~v~d~~~ 118 (260)
T d1rwia_ 102 GLAVDTQGAVYVADRGN 118 (260)
T ss_dssp EEEECTTCCEEEEEGGG
T ss_pred cccccccceeEeecccc
Confidence 44555666666554433
No 10
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]}
Probab=6.04 E-value=1.5e+02 Score=24.19 Aligned_cols=41 Identities=10% Similarity=0.152 Sum_probs=23.5
Q ss_pred EeeceeeeEEeeeecccccccCCCCCCccchhhhhcccceeeecccceeeeeeeeccc
Q 036502 308 REYMQGVLMKETVRNYTEQTRKGKPRNKHSVKEVKKKSCVDIFEGHRSYYLMLNLQLG 365 (367)
Q Consensus 308 rey~~g~li~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~gh~sy~lmlnlqlg 365 (367)
+=|+.|+++.+.............. ..=|+-++|+|||++|
T Consensus 197 ~~yvDG~~v~t~~~~~~~~~~~~~~-----------------~~~~~p~~liln~~~~ 237 (270)
T d1o4ya_ 197 EYYIDGVKVRTVTRAEIDPNNHLGG-----------------TGLNQATNIIIDCENQ 237 (270)
T ss_dssp EEEETTEEEEEECHHHHCTTCTTTT-----------------CCSCSCBEEEEEEECC
T ss_pred EEEECCEEEEEEcccccccccCccC-----------------CCCCCCceEEEEeeec
Confidence 3389999998876543222111100 0124457899999876
Done!