Query 036503
Match_columns 112
No_of_seqs 121 out of 1019
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 03:46:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036503.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036503hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jrn_A AT1G72930 protein; TIR 100.0 1.3E-41 4.3E-46 243.8 5.7 106 1-109 11-152 (176)
2 3ozi_A L6TR; plant TIR domain, 100.0 3.9E-41 1.3E-45 245.7 5.3 108 1-111 38-182 (204)
3 3h16_A TIR protein; bacteria T 99.8 2.3E-22 7.8E-27 139.9 1.5 93 1-100 23-151 (154)
4 3ub2_A TOLL/interleukin-1 rece 99.3 1.8E-13 6.3E-18 94.6 -0.4 87 1-97 13-145 (146)
5 1fyx_A TOLL-like receptor 2; b 99.0 2.4E-10 8.4E-15 78.8 2.6 43 1-46 8-54 (149)
6 2j67_A TOLL like receptor 10; 98.8 1.1E-09 3.9E-14 77.7 2.5 43 1-46 38-84 (178)
7 2js7_A Myeloid differentiation 98.7 1.7E-09 5.7E-14 75.5 0.7 39 1-42 19-60 (160)
8 1t3g_A X-linked interleukin-1 98.7 6.4E-09 2.2E-13 72.5 2.7 45 1-46 5-61 (159)
9 3j0a_A TOLL-like receptor 5; m 97.3 0.00018 6.2E-09 60.1 4.1 43 1-46 673-722 (844)
10 3hjn_A DTMP kinase, thymidylat 60.5 5.1 0.00017 27.6 2.4 32 1-32 1-33 (197)
11 1bax_A M-PMV MA, M-PMV matrix 55.5 5.7 0.00019 25.1 1.7 17 14-30 10-26 (94)
12 4a6h_A Phosphatidylinositol 4, 54.7 8.2 0.00028 24.7 2.5 20 85-104 101-120 (120)
13 2lpy_A Matrix protein P10; GAG 51.8 7.3 0.00025 25.8 1.8 17 14-30 9-25 (124)
14 2yry_A Pleckstrin homology dom 46.4 15 0.00051 22.4 2.7 19 85-103 103-121 (122)
15 1v5p_A Pleckstrin homology dom 43.6 17 0.00059 23.1 2.7 20 85-104 103-122 (126)
16 2d9v_A Pleckstrin homology dom 41.2 26 0.00089 22.0 3.3 22 85-106 97-118 (130)
17 2cof_A Protein KIAA1914; PH do 40.8 21 0.00072 21.4 2.7 19 85-103 84-102 (107)
18 2i5f_A Pleckstrin; PH domain, 40.2 21 0.00072 21.1 2.6 17 85-101 92-108 (109)
19 1tu9_A Hypothetical protein PA 39.3 9.3 0.00032 24.4 0.8 43 58-104 84-128 (134)
20 2coc_A FYVE, rhogef and PH dom 38.7 22 0.00076 22.3 2.6 18 85-102 89-106 (112)
21 1x1g_A Pleckstrin 2; PH domain 36.9 26 0.00088 21.5 2.7 19 85-103 107-125 (129)
22 1dro_A Beta-spectrin; cytoskel 36.3 24 0.00082 21.8 2.5 20 85-104 102-121 (122)
23 1upq_A PEPP1; PH domain, phosp 36.0 26 0.00089 21.2 2.6 21 85-105 92-112 (123)
24 1wgq_A FYVE, rhogef and PH dom 35.2 27 0.00092 20.8 2.5 18 85-102 86-103 (109)
25 3aj4_A Pleckstrin homology dom 34.7 29 0.00098 20.8 2.6 17 85-101 94-110 (112)
26 2d9y_A Pleckstrin homology dom 34.3 29 0.001 20.7 2.6 20 85-104 92-111 (117)
27 2dkp_A Pleckstrin homology dom 34.0 30 0.001 21.1 2.7 19 85-103 102-120 (128)
28 3cxb_B Pleckstrin homology dom 34.0 29 0.001 21.2 2.6 18 85-102 84-101 (112)
29 1x05_A Pleckstrin; PH domain, 33.9 32 0.0011 21.1 2.8 20 85-104 103-122 (129)
30 2w2x_D 1-phosphatidylinositol- 33.9 24 0.00083 22.0 2.2 19 85-103 102-120 (124)
31 1wjm_A Beta-spectrin III; PH d 33.7 26 0.00089 21.5 2.3 18 85-102 100-117 (123)
32 3ro3_B Minsc, peptide of prote 33.3 34 0.0012 15.6 2.0 15 87-101 7-21 (22)
33 1x1f_A Signal-transducing adap 33.0 28 0.00096 23.0 2.5 21 85-105 96-116 (149)
34 2nrl_A Myoglobin; transport pr 32.9 13 0.00044 24.2 0.7 44 58-104 93-136 (147)
35 1v89_A Hypothetical protein KI 32.8 28 0.00096 20.7 2.3 19 85-103 95-113 (118)
36 2lul_A Tyrosine-protein kinase 32.1 31 0.001 22.8 2.6 19 85-103 104-122 (164)
37 1u5d_A SKAP55, SRC kinase-asso 31.3 31 0.0011 20.1 2.3 18 85-102 88-105 (108)
38 2dn6_A KIAA0640 protein; PH do 30.9 31 0.0011 20.5 2.3 20 85-104 86-105 (115)
39 2d9x_A Oxysterol binding prote 30.8 31 0.0011 21.1 2.3 20 85-104 87-106 (120)
40 2dhk_A TBC1 domain family memb 30.4 35 0.0012 20.9 2.5 17 85-101 87-103 (119)
41 1fgy_A GRP1; PH domain, signal 30.4 32 0.0011 20.8 2.3 18 85-102 103-120 (127)
42 1btn_A Beta-spectrin; signal t 29.7 33 0.0011 20.0 2.2 16 85-100 91-106 (106)
43 1v88_A Oxysterol binding prote 29.7 40 0.0014 21.5 2.7 20 85-104 107-126 (130)
44 1v5u_A SBF1, SET binding facto 29.4 34 0.0012 20.4 2.3 19 85-103 94-112 (117)
45 3g46_A Globin-1; oxygen transp 29.3 19 0.00065 23.3 1.1 41 58-102 104-144 (146)
46 2vhb_A Hemoglobin; heme, respi 28.2 21 0.00072 22.8 1.2 42 58-103 88-132 (146)
47 1unq_A RAC-alpha serine/threon 28.1 37 0.0013 20.7 2.3 18 85-102 93-110 (125)
48 3rcp_A Pleckstrin homology dom 27.7 36 0.0012 19.9 2.1 19 85-103 76-94 (103)
49 2j59_M RHO-GTPase activating p 27.5 43 0.0015 21.7 2.7 19 85-103 94-112 (168)
50 3d1k_A Hemoglobin subunit alph 27.4 66 0.0022 20.5 3.5 43 58-104 92-137 (142)
51 2w72_C Human hemoglobin A; iro 27.2 18 0.00063 23.1 0.7 43 58-104 91-136 (141)
52 2cod_A Centaurin-delta 1; ARF 27.2 44 0.0015 20.0 2.5 17 85-101 82-98 (115)
53 3ubc_A Hemoglobin-like flavopr 26.9 35 0.0012 21.4 2.0 42 58-103 84-128 (131)
54 1ug7_A 2610208M17RIK protein; 26.7 18 0.00062 23.9 0.6 18 89-106 15-32 (128)
55 3bom_A Hemoglobin subunit alph 26.7 64 0.0022 20.6 3.4 42 58-103 93-137 (143)
56 1pls_A Pleckstrin homology dom 26.7 45 0.0016 19.8 2.5 20 85-104 84-103 (113)
57 1eaz_A Tandem PH domain contai 26.3 46 0.0016 20.0 2.5 19 85-103 94-112 (125)
58 2zp2_A Kinase A inhibitor; KIP 25.9 67 0.0023 21.4 3.4 9 51-59 2-10 (141)
59 2da0_A 130-kDa phosphatidylino 25.4 45 0.0015 20.1 2.3 18 85-102 84-101 (114)
60 1sct_A Hemoglobin II (carbonmo 25.1 36 0.0012 22.0 1.9 42 58-103 105-149 (150)
61 2vyw_A Hemoglobin; trematode, 24.1 27 0.00094 22.7 1.2 42 58-103 102-143 (148)
62 2wy4_A Single domain haemoglob 23.8 27 0.00091 22.1 1.0 42 58-103 87-129 (140)
63 2r80_A Hemoglobin subunit alph 23.7 71 0.0024 20.4 3.2 43 58-104 91-136 (141)
64 2y7b_A Actin-binding protein a 23.7 49 0.0017 20.3 2.3 18 85-102 111-128 (134)
65 2p0d_A RHO GTPase-activating p 23.3 52 0.0018 20.6 2.4 18 85-102 107-124 (129)
66 1cg5_A Protein (hemoglobin); o 23.2 24 0.00081 22.8 0.7 43 58-104 92-136 (141)
67 2rlo_A Centaurin-gamma 1; spli 22.8 58 0.002 20.1 2.5 18 85-102 107-124 (128)
68 1u5e_A SRC-associated adaptor 22.8 55 0.0019 22.6 2.6 21 85-105 191-211 (211)
69 1wg7_A Dedicator of cytokinesi 22.4 53 0.0018 20.7 2.3 18 85-102 107-124 (150)
70 1xq5_A Hemoglobin alpha-1 chai 22.2 81 0.0028 20.1 3.2 42 58-103 93-137 (143)
71 2ys3_A UNC-112-related protein 21.7 61 0.0021 21.5 2.5 16 86-101 96-111 (137)
72 2rsg_A Collagen type IV alpha- 21.6 23 0.00079 20.6 0.3 16 85-100 77-92 (94)
73 1q1f_A Neuroglobin; globin fol 21.6 46 0.0016 21.1 1.9 43 58-104 99-144 (151)
74 4hrt_B Hemoglobin B chain; oxy 21.5 57 0.002 21.1 2.3 41 58-102 107-150 (152)
75 4aqr_D Calcium-transporting AT 21.0 58 0.002 18.5 1.9 14 87-101 3-16 (57)
76 2r80_B Hemoglobin subunit beta 20.8 52 0.0018 21.1 2.0 43 58-104 96-141 (146)
77 1wmu_A Hemoglobin D alpha chai 20.6 34 0.0012 21.8 1.0 43 58-104 91-136 (141)
78 1h97_A Globin-3; HET: HEM; 1.1 20.6 31 0.0011 22.4 0.8 42 58-103 101-142 (147)
79 3bom_B Hemoglobin subunit beta 20.4 49 0.0017 21.4 1.8 45 58-103 96-141 (147)
80 1unk_A Colicin E7; immunity pr 20.4 57 0.002 20.1 2.0 15 88-106 70-84 (87)
81 1u5f_A SRC-associated adaptor 20.4 67 0.0023 20.3 2.5 20 85-104 102-121 (148)
82 1fao_A Dual adaptor of phospho 20.3 64 0.0022 19.5 2.3 19 85-103 95-113 (126)
83 2w72_B Human hemoglobin A; iro 20.2 54 0.0018 21.0 2.0 43 58-104 96-141 (146)
84 3u43_A Colicin-E2 immunity pro 20.2 57 0.002 20.3 2.0 15 88-106 69-83 (94)
85 2hfv_A Hypothetical protein RP 20.2 69 0.0024 20.0 2.4 23 14-36 33-56 (97)
86 3mkb_B Hemoglobin subunit beta 20.1 56 0.0019 21.1 2.0 45 58-104 86-131 (136)
87 1sct_B Hemoglobin II (carbonmo 20.0 54 0.0018 21.1 2.0 42 58-103 106-150 (151)
No 1
>3jrn_A AT1G72930 protein; TIR domain arabidopsis thaliana, plant protein; 2.00A {Arabidopsis thaliana}
Probab=100.00 E-value=1.3e-41 Score=243.76 Aligned_cols=106 Identities=38% Similarity=0.589 Sum_probs=88.9
Q ss_pred CceecccCCCCCCchHhHHHHHHhhCCCceeeeC-CCCCCccchHHH---------------------------------
Q 036503 1 MSLSVSEERTPETTLLAIYIQISLDKNIRTFIDD-QLNRGDEISESL--------------------------------- 46 (112)
Q Consensus 1 ~Flsfrg~d~~~~~F~shL~~aL~~~gI~~F~D~-~l~~g~~i~~~l--------------------------------- 46 (112)
|||||||+|+|. +|++||+++|.++||++|+|+ ++++|+.|.+.|
T Consensus 11 VFiSfrg~D~r~-~Fv~~L~~~L~~~gi~~f~D~~~l~~G~~i~~~l~~aIe~Sri~IvV~S~ny~~S~WCl~EL~~i~~ 89 (176)
T 3jrn_A 11 VFLSFRGHDTRH-NFISFLYKELVRRSIRTFKDDKELENGQRFSPELKSPIEVSRFAVVVVSENYAASSWCLDELVTIMD 89 (176)
T ss_dssp EEEEECHHHHTT-THHHHHHHHHHHTTCCEECCCC--------------CCTTEEEEEEEECTTTTTCHHHHHHHHHHHH
T ss_pred EEEECcCcccCh-HHHHHHHHHHHHCCCEEEEEcccccCCCchHHHHHHHHHhCCEEEEEecCCcCCChhHHHHHHHHHh
Confidence 699999999998 999999999999999999997 899999998766
Q ss_pred --HhcCceeEeEEeecCCcccccccCchHHHHHHHHHhhccChHHHHHHHHHHHHhhcccCcccC
Q 036503 47 --KEYGQVVIPVFYRVDPSDVRNQTGSFGDSFSKLEERSKENSEKLQTWRNALKEAASLSGFPSQ 109 (112)
Q Consensus 47 --~~~~~~ViPVFY~V~psdVr~q~g~fg~af~~~~~~~~~~~e~v~~W~~AL~~v~~~~G~~~~ 109 (112)
++.+++||||||+|+|++||+|+|.||+||.+|+++ .+++++++||.||++||+++||++.
T Consensus 90 ~~~~~~~~ViPIfy~V~ps~Vr~q~g~fg~af~~~~~~--~~~~~~~~Wr~AL~~va~~~G~~~~ 152 (176)
T 3jrn_A 90 FEKKGSITVMPIFYGVEPNHVRWQTGVLAEQFKKHASR--EDPEKVLKWRQALTNFAQLSGDCSG 152 (176)
T ss_dssp HHHTTSCEEEEEECSSCHHHHHHTCTHHHHHHHHHHTT--SCHHHHHHHHHHHHHHTTSCCEECC
T ss_pred hhccCCCEEEEEEecCCHHHhhhccCcHHHHHHHHHhc--cCHHHHHHHHHHHHHHhcccceecC
Confidence 456899999999999999999999999999999987 4589999999999999999999974
No 2
>3ozi_A L6TR; plant TIR domain, plant protein; 2.30A {Linum usitatissimum}
Probab=100.00 E-value=3.9e-41 Score=245.71 Aligned_cols=108 Identities=35% Similarity=0.592 Sum_probs=100.0
Q ss_pred CceecccCCCCCCchHhHHHHHHhhCCCceeeeC-CCCCCccchHHH---------------------------------
Q 036503 1 MSLSVSEERTPETTLLAIYIQISLDKNIRTFIDD-QLNRGDEISESL--------------------------------- 46 (112)
Q Consensus 1 ~Flsfrg~d~~~~~F~shL~~aL~~~gI~~F~D~-~l~~g~~i~~~l--------------------------------- 46 (112)
|||||||+|+|. +|++||+.+|.++||++|+|+ ++++|+.|.+.|
T Consensus 38 VFISfrg~D~r~-~Fv~~L~~aL~~~GI~~f~D~~el~~G~~I~~~l~~aIe~Sri~IvV~S~nYa~S~WCl~EL~~I~e 116 (204)
T 3ozi_A 38 VFLSFRGPDTRE-QFTDFLYQSLRRYKIHTFRDDDELLKGKEIGPNLLRAIDQSKIYVPIISSGYADSKWCLMELAEIVR 116 (204)
T ss_dssp EEEEECHHHHTT-THHHHHHHHHHHTTCCEEEEETTTCCGGGTTTTHHHHHHHCSEEEEEECTTGGGCHHHHHHHHHHHH
T ss_pred EEEeccccCCCH-HHHHHHHHHHHHCCCcEEEeCCccCCCCchHHHHHHHHHhCcEeeEEEEcccccCcHHHHHHHHHHH
Confidence 699999999999 999999999999999999998 899999987655
Q ss_pred --Hh-cCceeEeEEeecCCcccccccCchHHHHHHHHHhhccChHHHHHHHHHHHHhhcccCcccCCC
Q 036503 47 --KE-YGQVVIPVFYRVDPSDVRNQTGSFGDSFSKLEERSKENSEKLQTWRNALKEAASLSGFPSQNI 111 (112)
Q Consensus 47 --~~-~~~~ViPVFY~V~psdVr~q~g~fg~af~~~~~~~~~~~e~v~~W~~AL~~v~~~~G~~~~~~ 111 (112)
++ .+++||||||+|+|++||+|+|.||+||.+|++++. ++++++||.||++||+++||++.++
T Consensus 117 ~~~~~~~~~ViPIFY~VdPs~Vr~q~g~fg~af~~~~~~~~--~~~v~~Wr~AL~~va~lsG~~~~~~ 182 (204)
T 3ozi_A 117 RQEEDPRRIILPIFYMVDPSDVRHQTGCYKKAFRKHANKFD--GQTIQNWKDALKKVGDLKGWHIGKN 182 (204)
T ss_dssp HHHHCTTSEECCEEESSCHHHHHHTCTTHHHHHHHHTTTSC--HHHHHHHHHHHHHHHTSCBEEECTT
T ss_pred HHHhcCCeeeEEEEeecCHHHHHhccccHHHHHHHHHHhhC--HHHHHHHHHHHHHHhccCceecCCC
Confidence 22 479999999999999999999999999999998874 6899999999999999999999875
No 3
>3h16_A TIR protein; bacteria TIR domain, signaling protein; 2.50A {Paracoccus denitrificans PD1222}
Probab=99.84 E-value=2.3e-22 Score=139.91 Aligned_cols=93 Identities=14% Similarity=0.229 Sum_probs=76.6
Q ss_pred CceecccCCCCCCchHhHHHHHHhhCCCceeeeC-CCCCCccchHHH---------------------------------
Q 036503 1 MSLSVSEERTPETTLLAIYIQISLDKNIRTFIDD-QLNRGDEISESL--------------------------------- 46 (112)
Q Consensus 1 ~Flsfrg~d~~~~~F~shL~~aL~~~gI~~F~D~-~l~~g~~i~~~l--------------------------------- 46 (112)
+||||+|+| +. .|+.||+.+|.++||++|+|+ ++.+|+.+.+.|
T Consensus 23 vFISy~~~D-~~-~~~~~L~~~L~~~gi~v~~D~~~l~~G~~~~~~i~~ai~~s~~~i~v~S~~y~~S~wc~~El~~~~~ 100 (154)
T 3h16_A 23 IFISHAWED-KA-DFVEALAHTLRAAGAEVWYDDFSLRPGDSLRRSIDKGLGSSRFGIVVLSTHFFKKEWPQKELDGLFQ 100 (154)
T ss_dssp EEEEEEGGG-TT-TTHHHHHHHHHHHTCCEECGGGEECTTCCHHHHHHHHHTSEEEEEEEEEHHHHTTCCCHHHHHHHTC
T ss_pred EEEECcccC-hH-HHHHHHHHHHHHCCCcEEEcHHhCCCccHHHHHHHHHHHhCcEEEEEeCcchhcChHHHHHHHHHHH
Confidence 699999999 55 899999999999999999999 899999887765
Q ss_pred --HhcCceeEeEEeecCCcccccccCchHHHHHHHHHhhccChHHHHHHHHHHHHh
Q 036503 47 --KEYGQVVIPVFYRVDPSDVRNQTGSFGDSFSKLEERSKENSEKLQTWRNALKEA 100 (112)
Q Consensus 47 --~~~~~~ViPVFY~V~psdVr~q~g~fg~af~~~~~~~~~~~e~v~~W~~AL~~v 100 (112)
.+.++.||||||+|+|++||+|+|.||++|...... ..+.++-+.|.++
T Consensus 101 ~~~~~~~~iiPV~~~v~p~~v~~~~~~~~~~~~~~~~~-----~~~~~ia~~l~~l 151 (154)
T 3h16_A 101 LESSGRSRILPIWHKVSKDEVASFSPTMADKLAFNTST-----KSVDEIVADLMAI 151 (154)
T ss_dssp CCTTSCCCEEEEEESCCTGGGTTTCCCCCSSCCEETTT-----SCHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEEecCCHHHHhhCCccHHHHHhhhcCc-----ccHHHHHHHHHHH
Confidence 234578999999999999999999999998755432 2345555555544
No 4
>3ub2_A TOLL/interleukin-1 receptor domain-containing ADA protein; TIR domain, TLRS adaptor, immune system; 2.40A {Homo sapiens} PDB: 3ub3_A 3ub4_A 2y92_A
Probab=99.30 E-value=1.8e-13 Score=94.55 Aligned_cols=87 Identities=16% Similarity=0.201 Sum_probs=49.6
Q ss_pred CceecccCCCCCCchHhHHHHHHhh--CCCceeeeC-CCCCCccchHHH-------------------------------
Q 036503 1 MSLSVSEERTPETTLLAIYIQISLD--KNIRTFIDD-QLNRGDEISESL------------------------------- 46 (112)
Q Consensus 1 ~Flsfrg~d~~~~~F~shL~~aL~~--~gI~~F~D~-~l~~g~~i~~~l------------------------------- 46 (112)
+||||+++|+ .|+.+|+.+|.+ .|+++|+|+ ++.+|+.|.+.+
T Consensus 13 vFISy~~~D~---~~v~~L~~~Le~~~~g~~~~l~~rD~~~G~~i~~~i~~aI~~Sr~~I~VlS~~y~~S~wc~~El~~a 89 (146)
T 3ub2_A 13 VCVCHSEEDL---VAAQDLVSYLEGSTASLRCFLQLRDATPGGAIVSELCQALSSSHCRVLLITPGFLQDPWCKYQMLQA 89 (146)
T ss_dssp EEEECCGGGH---HHHHHHHHHHHC------------------CCCEEECCTTCCEEEEEEEECHHHHHCHHHHHHHHHH
T ss_pred EEEeCChhhH---HHHHHHHHHHhCcCCCeEEEEECccccccccHHHHHHHHHHhCCEEEEEECcccccCHHHHHHHHHH
Confidence 5999999997 578999999998 699999998 888998765433
Q ss_pred -H---hcCceeEeEEeecCCcc----cccccCc----hHHHHHHHHHhhccChHHHHHHHHHH
Q 036503 47 -K---EYGQVVIPVFYRVDPSD----VRNQTGS----FGDSFSKLEERSKENSEKLQTWRNAL 97 (112)
Q Consensus 47 -~---~~~~~ViPVFY~V~psd----Vr~q~g~----fg~af~~~~~~~~~~~e~v~~W~~AL 97 (112)
. .....||||||+|++.+ ++..... ..++|.+. .+.|.+|++||
T Consensus 90 l~~~~~~~~~vIpv~~~v~~~~lp~~Lr~~~~id~~~~d~~f~~l-------~~~v~~~~~~~ 145 (146)
T 3ub2_A 90 LTEAPGAEGCTIPLLSGLSRAAYPPELRFMYYVDGRGPDGGFRQV-------KEAVMRYLQTL 145 (146)
T ss_dssp HHTSSSSSSEEEEEECSCCGGGSCGGGGGSCCEETTSGGGGHHHH-------HHHHHHHHTTC
T ss_pred HHHHhhcCCcEEEEEcCCChhhCCHHHhCeeeeeccChHhhHHHH-------HHHHHHHHHhc
Confidence 1 11236779999999544 5654432 23444333 47789999886
No 5
>1fyx_A TOLL-like receptor 2; beta-alpha-beta fold, signaling protein; 2.80A {Homo sapiens} SCOP: c.23.2.1 PDB: 1fyw_A 1o77_A
Probab=98.95 E-value=2.4e-10 Score=78.76 Aligned_cols=43 Identities=14% Similarity=0.132 Sum_probs=38.5
Q ss_pred CceecccCCCCCCchHhH-HHHHHhhC--CCceeeeC-CCCCCccchHHH
Q 036503 1 MSLSVSEERTPETTLLAI-YIQISLDK--NIRTFIDD-QLNRGDEISESL 46 (112)
Q Consensus 1 ~Flsfrg~d~~~~~F~sh-L~~aL~~~--gI~~F~D~-~l~~g~~i~~~l 46 (112)
+||||+|+|+ .|+.+ |+.+|.++ |+++|+|+ ++.+|+.|.+.+
T Consensus 8 vFiSy~~~D~---~~v~~~L~~~Le~~~~g~~~~~~~rd~~~G~~~~~~i 54 (149)
T 1fyx_A 8 AFVSYSERDA---YWVENLMVQELENFNPPFKLXLHKRDFIHGKWIIDNI 54 (149)
T ss_dssp EEEECCGGGH---HHHHTHHHHHHTTSSSCCCEEEHHHHCCSSSCHHHHH
T ss_pred EEEECCcccH---HHHHHHHHHHHhcCCCCeEEeeccccCCCchhHHHHH
Confidence 5999999997 89997 99999986 99999999 899999887665
No 6
>2j67_A TOLL like receptor 10; TIR, IL-1, TLR10, membrane, innate immunity, immune response, leucine-rich repeat, glycoprotein, transmembrane; 2.20A {Homo sapiens} PDB: 1fyv_A
Probab=98.83 E-value=1.1e-09 Score=77.73 Aligned_cols=43 Identities=21% Similarity=0.206 Sum_probs=37.5
Q ss_pred CceecccCCCCCCchHh-HHHHHHhh--CCCceeeeC-CCCCCccchHHH
Q 036503 1 MSLSVSEERTPETTLLA-IYIQISLD--KNIRTFIDD-QLNRGDEISESL 46 (112)
Q Consensus 1 ~Flsfrg~d~~~~~F~s-hL~~aL~~--~gI~~F~D~-~l~~g~~i~~~l 46 (112)
+||||+|+|+ .|+. +|+.+|.+ .|+++|+|+ ++.+|+.|.+.+
T Consensus 38 vFISys~~D~---~fv~~~L~~~LE~~~~g~~~~l~~rD~~~G~~i~~~i 84 (178)
T 2j67_A 38 AFISYSEHDS---LWVKNELIPNLEKEDGSILICLYESYFDPGKSISENI 84 (178)
T ss_dssp EEEECCGGGH---HHHHHTHHHHHTTCC-CCCEEEHHHHCCTTSCHHHHH
T ss_pred EEEECCCCCH---HHHHHHHHHHHhcccCCeEEEEecccCCCCccHHHHH
Confidence 5999999996 8997 59999998 899999998 899999887765
No 7
>2js7_A Myeloid differentiation primary response protein MYD88; MYD88_human, TIR domain, TOLL like receptor adaptor domain, innate immune signaling; NMR {Homo sapiens} PDB: 2z5v_A
Probab=98.73 E-value=1.7e-09 Score=75.51 Aligned_cols=39 Identities=8% Similarity=0.131 Sum_probs=34.3
Q ss_pred CceecccCCCCCCchHhHHHHHHhhC--CCceeeeC-CCCCCccc
Q 036503 1 MSLSVSEERTPETTLLAIYIQISLDK--NIRTFIDD-QLNRGDEI 42 (112)
Q Consensus 1 ~Flsfrg~d~~~~~F~shL~~aL~~~--gI~~F~D~-~l~~g~~i 42 (112)
+||||+++|. .|+.+|+.+|.++ |+++|+|+ ++.+|+.|
T Consensus 19 vFISys~~D~---~fv~~L~~~Le~~~~g~~~~~~~rd~~~G~~i 60 (160)
T 2js7_A 19 AFICYCPSDI---QFVQEMIRQLEQTNYRLKLCVSDRDVLPGTCV 60 (160)
T ss_dssp EEEECCGGGH---HHHHHHHHHHHTSSSCCCCEESCCSSSSSCSC
T ss_pred EEEEcccccH---HHHHHHHHHHhcCCCceEEEEeCCCCCCCCcH
Confidence 5999999993 8999999999884 69999998 88888864
No 8
>1t3g_A X-linked interleukin-1 receptor accessory protein-like 1; TIR, IL-1RAPL, IL-1R, TLR, membrane protein; 2.30A {Homo sapiens}
Probab=98.69 E-value=6.4e-09 Score=72.45 Aligned_cols=45 Identities=18% Similarity=0.152 Sum_probs=37.3
Q ss_pred CceecccCCC---------CCCchHhHHHH-HHh-hCCCceeeeC-CCCCCccchHHH
Q 036503 1 MSLSVSEERT---------PETTLLAIYIQ-ISL-DKNIRTFIDD-QLNRGDEISESL 46 (112)
Q Consensus 1 ~Flsfrg~d~---------~~~~F~shL~~-aL~-~~gI~~F~D~-~l~~g~~i~~~l 46 (112)
+||||+++|+ +. +|+.||+. +|. +.|+++|+|+ ++.+|+.|...+
T Consensus 5 aFISy~~~D~~wv~~~~~~~~-~fv~~ll~~~LE~~~g~~l~~~~rD~~~G~~i~~~i 61 (159)
T 1t3g_A 5 AYLSYTKVDPDQWNQETGEEE-RFALEILPDMLEKHYGYKLFIPDRDLIPTGTYIEDV 61 (159)
T ss_dssp EEEECCCCC-------CCSHH-HHHHTHHHHHHHHTSCCCEECHHHHCCCCTTHHHHH
T ss_pred EEEeCccccchhhhccchhhH-HHHHHHHHHHHcCCCCeEEEEEcccccCccchHHHH
Confidence 5999999997 35 89999776 598 7999999998 888999876654
No 9
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=97.28 E-value=0.00018 Score=60.08 Aligned_cols=43 Identities=9% Similarity=0.137 Sum_probs=36.2
Q ss_pred CceecccCCCCCCchH-hHHHHHHhh-----CCCceeeeC-CCCCCccchHHH
Q 036503 1 MSLSVSEERTPETTLL-AIYIQISLD-----KNIRTFIDD-QLNRGDEISESL 46 (112)
Q Consensus 1 ~Flsfrg~d~~~~~F~-shL~~aL~~-----~gI~~F~D~-~l~~g~~i~~~l 46 (112)
+||||+++|. .|| ..|...|.. .|+++++++ ++.+|+.|...+
T Consensus 673 ~fisy~~~d~---~~v~~~l~~~Le~~~~~~~~~~~~~~~rd~~~G~~~~~~i 722 (844)
T 3j0a_A 673 AYLCFSSKDF---TWVQNALLKHLDTQYSDQNRFNLCFEERDFVPGENRIANI 722 (844)
T ss_dssp EEEECCSTTH---HHHHHTHHHHHHSTTTTTTCSCEECSSSSCCSSSCHHHHH
T ss_pred EEEEeeCCcH---HHHHHHHHHHHhhccccCCceEEEEEccccCCCchHHHHH
Confidence 4999999997 676 779999974 689999999 899999877655
No 10
>3hjn_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynth nucleotide-binding, transferase, structural genomics; HET: ADP TYD; 2.10A {Thermotoga maritima}
Probab=60.54 E-value=5.1 Score=27.58 Aligned_cols=32 Identities=9% Similarity=0.136 Sum_probs=26.2
Q ss_pred CceecccCCCCC-CchHhHHHHHHhhCCCceee
Q 036503 1 MSLSVSEERTPE-TTLLAIYIQISLDKNIRTFI 32 (112)
Q Consensus 1 ~Flsfrg~d~~~-~~F~shL~~aL~~~gI~~F~ 32 (112)
|||.|-|-|..- +|-+..|.+.|..+|+.|-.
T Consensus 1 mfI~~EG~DGsGKsTq~~~L~~~L~~~g~~v~~ 33 (197)
T 3hjn_A 1 MFITFEGIDGSGKSTQIQLLAQYLEKRGKKVIL 33 (197)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEE
Confidence 899998888653 26788899999999998754
No 11
>1bax_A M-PMV MA, M-PMV matrix protein; core protein, polyprotein, myristylation; NMR {Mason-pfizer monkey virus} SCOP: a.61.1.3 PDB: 2f76_X 2f77_X
Probab=55.48 E-value=5.7 Score=25.07 Aligned_cols=17 Identities=6% Similarity=0.085 Sum_probs=16.5
Q ss_pred chHhHHHHHHhhCCCce
Q 036503 14 TLLAIYIQISLDKNIRT 30 (112)
Q Consensus 14 ~F~shL~~aL~~~gI~~ 30 (112)
.|++.|...|+.+||+|
T Consensus 10 ~fi~~lk~lLk~RgIkV 26 (94)
T 1bax_A 10 RYVEQLKQALKTRGVKV 26 (94)
T ss_pred HHHHHHHHHHHHcCeee
Confidence 89999999999999998
No 12
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=54.69 E-value=8.2 Score=24.67 Aligned_cols=20 Identities=30% Similarity=0.478 Sum_probs=15.9
Q ss_pred cChHHHHHHHHHHHHhhccc
Q 036503 85 ENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~~ 104 (112)
++.+..++|.+||..++.++
T Consensus 101 ~s~~e~~~Wv~aI~~~~~~~ 120 (120)
T 4a6h_A 101 DSYESMMSWFDNLKILTSTS 120 (120)
T ss_dssp SSHHHHHHHHHHHHHHCC--
T ss_pred CCHHHHHHHHHHHHHHhccC
Confidence 45788999999999998763
No 13
>2lpy_A Matrix protein P10; GAG, myristoylated, myristate, viral protein; HET: MYR; NMR {Mason-pfizer monkey virus}
Probab=51.78 E-value=7.3 Score=25.76 Aligned_cols=17 Identities=6% Similarity=0.085 Sum_probs=16.0
Q ss_pred chHhHHHHHHhhCCCce
Q 036503 14 TLLAIYIQISLDKNIRT 30 (112)
Q Consensus 14 ~F~shL~~aL~~~gI~~ 30 (112)
.|++.|..+|+++||+|
T Consensus 9 ~fi~~Lk~~LK~rGvkV 25 (124)
T 2lpy_A 9 RYVEQLKQALKTRGVKV 25 (124)
T ss_dssp HHHHHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHHHCCeee
Confidence 69999999999999987
No 14
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.40 E-value=15 Score=22.36 Aligned_cols=19 Identities=37% Similarity=0.650 Sum_probs=16.0
Q ss_pred cChHHHHHHHHHHHHhhcc
Q 036503 85 ENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~ 103 (112)
++++..+.|..||..++.+
T Consensus 103 ~s~~e~~~Wi~al~~a~~~ 121 (122)
T 2yry_A 103 ESPEEQEAWIQAMGEAARV 121 (122)
T ss_dssp SSHHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 3578899999999998865
No 15
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=43.64 E-value=17 Score=23.15 Aligned_cols=20 Identities=25% Similarity=0.574 Sum_probs=17.0
Q ss_pred cChHHHHHHHHHHHHhhccc
Q 036503 85 ENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~~ 104 (112)
++++..+.|.+||..++.+.
T Consensus 103 ~s~~e~~~Wi~al~~a~~~~ 122 (126)
T 1v5p_A 103 NDQKDLKDWVEALNQASKSG 122 (126)
T ss_dssp SSHHHHHHHHHHHHHTTTTS
T ss_pred CCHHHHHHHHHHHHHHHhcC
Confidence 46788999999999998764
No 16
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=41.19 E-value=26 Score=21.96 Aligned_cols=22 Identities=32% Similarity=0.466 Sum_probs=18.0
Q ss_pred cChHHHHHHHHHHHHhhcccCc
Q 036503 85 ENSEKLQTWRNALKEAASLSGF 106 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~~G~ 106 (112)
++++..+.|..||..+...+..
T Consensus 97 ~s~~e~~~Wi~al~~a~~~~~~ 118 (130)
T 2d9v_A 97 ETRDDAIAWKTALMEANSTPAP 118 (130)
T ss_dssp SSHHHHHHHHHHHHHHHTCCCC
T ss_pred CCHHHHHHHHHHHHHHHcCCCC
Confidence 4678899999999999876643
No 17
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=40.77 E-value=21 Score=21.39 Aligned_cols=19 Identities=21% Similarity=0.410 Sum_probs=15.7
Q ss_pred cChHHHHHHHHHHHHhhcc
Q 036503 85 ENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~ 103 (112)
++++..++|..||..++.-
T Consensus 84 ~s~~e~~~Wi~al~~~~~~ 102 (107)
T 2cof_A 84 KSSEEMGHWLGLLLSESGS 102 (107)
T ss_dssp SSHHHHHHHHHHHHHHSSC
T ss_pred CCHHHHHHHHHHHHHHHcC
Confidence 4578899999999988764
No 18
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=40.19 E-value=21 Score=21.12 Aligned_cols=17 Identities=18% Similarity=0.429 Sum_probs=14.3
Q ss_pred cChHHHHHHHHHHHHhh
Q 036503 85 ENSEKLQTWRNALKEAA 101 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~ 101 (112)
++++..+.|..||..++
T Consensus 92 ~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 92 ATPKERTEWIKAIQMAS 108 (109)
T ss_dssp SSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 45788999999999876
No 19
>1tu9_A Hypothetical protein PA3967; structural genomics, heme, hemoglobin, pseudomonas aeruginos PSI, protein structure initiative; HET: HEM; 1.20A {Pseudomonas aeruginosa} SCOP: a.1.1.2
Probab=39.31 E-value=9.3 Score=24.35 Aligned_cols=43 Identities=12% Similarity=0.264 Sum_probs=27.2
Q ss_pred eecCCcccccccCchHHHHHHHHHhhcc--ChHHHHHHHHHHHHhhccc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEERSKE--NSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~~~~--~~e~v~~W~~AL~~v~~~~ 104 (112)
|+|+|.+-.- +|+++...-..++. +++...-|..++..+++..
T Consensus 84 ~gV~p~~f~~----~~~~Ll~~l~~lg~~~t~e~~~AW~~~~~~~a~~l 128 (134)
T 1tu9_A 84 LDIRPELYDL----WLDALLMAVAEHDRDCDAETRDAWRDVMGRGIAVI 128 (134)
T ss_dssp TCCCTTHHHH----HHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHH----HHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHH
Confidence 3566666543 45555554443432 5677788999999988753
No 20
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=38.71 E-value=22 Score=22.30 Aligned_cols=18 Identities=33% Similarity=0.499 Sum_probs=15.2
Q ss_pred cChHHHHHHHHHHHHhhc
Q 036503 85 ENSEKLQTWRNALKEAAS 102 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~ 102 (112)
++++..++|.+||..++.
T Consensus 89 ~s~e~~~~Wl~al~~A~~ 106 (112)
T 2coc_A 89 SSAELQQQWLETLSTAAH 106 (112)
T ss_dssp SSHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHhc
Confidence 467889999999998764
No 21
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=36.89 E-value=26 Score=21.52 Aligned_cols=19 Identities=21% Similarity=0.342 Sum_probs=15.9
Q ss_pred cChHHHHHHHHHHHHhhcc
Q 036503 85 ENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~ 103 (112)
++++..+.|..||..++.-
T Consensus 107 ~s~~e~~~Wi~al~~~~~~ 125 (129)
T 1x1g_A 107 SSKAERAEWIEAIKKLTSG 125 (129)
T ss_dssp SSHHHHHHHHHHHHHHSSS
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 4578899999999998764
No 22
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=36.34 E-value=24 Score=21.79 Aligned_cols=20 Identities=15% Similarity=0.484 Sum_probs=16.3
Q ss_pred cChHHHHHHHHHHHHhhccc
Q 036503 85 ENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~~ 104 (112)
++++.++.|..||..+++..
T Consensus 102 ~s~~e~~~Wi~ai~~~i~~~ 121 (122)
T 1dro_A 102 HDDTEMSQWVTSLKAQSDST 121 (122)
T ss_dssp SSSHHHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 35788999999999987653
No 23
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=36.03 E-value=26 Score=21.23 Aligned_cols=21 Identities=33% Similarity=0.580 Sum_probs=15.6
Q ss_pred cChHHHHHHHHHHHHhhcccC
Q 036503 85 ENSEKLQTWRNALKEAASLSG 105 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~~G 105 (112)
++++....|..||..++...+
T Consensus 92 ~s~~e~~~Wi~al~~a~~~~~ 112 (123)
T 1upq_A 92 DTLEDLRGWLRALGRASRAEG 112 (123)
T ss_dssp SSHHHHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHHHHHHhccc
Confidence 457889999999999987654
No 24
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=35.16 E-value=27 Score=20.82 Aligned_cols=18 Identities=22% Similarity=0.580 Sum_probs=14.8
Q ss_pred cChHHHHHHHHHHHHhhc
Q 036503 85 ENSEKLQTWRNALKEAAS 102 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~ 102 (112)
++++..+.|..||..++.
T Consensus 86 ~s~~e~~~Wi~al~~a~~ 103 (109)
T 1wgq_A 86 DDAHSTQRWIDAFQEGTV 103 (109)
T ss_dssp SSHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHhc
Confidence 457889999999998764
No 25
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=34.68 E-value=29 Score=20.76 Aligned_cols=17 Identities=18% Similarity=0.585 Sum_probs=14.3
Q ss_pred cChHHHHHHHHHHHHhh
Q 036503 85 ENSEKLQTWRNALKEAA 101 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~ 101 (112)
++++..+.|..||..+.
T Consensus 94 ~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 94 ESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp SSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 45788999999999875
No 26
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.30 E-value=29 Score=20.72 Aligned_cols=20 Identities=35% Similarity=0.621 Sum_probs=16.3
Q ss_pred cChHHHHHHHHHHHHhhccc
Q 036503 85 ENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~~ 104 (112)
++++..+.|..||..++...
T Consensus 92 ~s~~e~~~Wi~al~~~~~~~ 111 (117)
T 2d9y_A 92 ESPEEQEAWIQAMGEAARVQ 111 (117)
T ss_dssp SSHHHHHHHHHHHHHTTCCT
T ss_pred CCHHHHHHHHHHHHHHHhhc
Confidence 35788999999999987643
No 27
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=34.03 E-value=30 Score=21.08 Aligned_cols=19 Identities=21% Similarity=0.576 Sum_probs=15.7
Q ss_pred cChHHHHHHHHHHHHhhcc
Q 036503 85 ENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~ 103 (112)
++++..+.|..||..++..
T Consensus 102 ~s~~e~~~Wi~al~~a~~~ 120 (128)
T 2dkp_A 102 DTGKEMELWMKAMLDAALV 120 (128)
T ss_dssp SSHHHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 3578899999999988764
No 28
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=34.00 E-value=29 Score=21.23 Aligned_cols=18 Identities=28% Similarity=0.527 Sum_probs=15.0
Q ss_pred cChHHHHHHHHHHHHhhc
Q 036503 85 ENSEKLQTWRNALKEAAS 102 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~ 102 (112)
++++.++.|..||..++.
T Consensus 84 ~s~ee~~~Wi~ai~~~~~ 101 (112)
T 3cxb_B 84 ESEAEMAEWMQHLCQAVS 101 (112)
T ss_dssp SSHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHhh
Confidence 457889999999998765
No 29
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=33.92 E-value=32 Score=21.12 Aligned_cols=20 Identities=15% Similarity=0.346 Sum_probs=16.3
Q ss_pred cChHHHHHHHHHHHHhhccc
Q 036503 85 ENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~~ 104 (112)
++++..+.|..||..++...
T Consensus 103 ~s~~e~~~Wi~al~~~~~~~ 122 (129)
T 1x05_A 103 ATPKERTEWIKAIQMASRTG 122 (129)
T ss_dssp SSHHHHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHHHHcc
Confidence 45788999999999988643
No 30
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=33.91 E-value=24 Score=22.04 Aligned_cols=19 Identities=21% Similarity=0.438 Sum_probs=15.2
Q ss_pred cChHHHHHHHHHHHHhhcc
Q 036503 85 ENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~ 103 (112)
++.+..+.|..||..++..
T Consensus 102 ~s~ee~~~Wi~ai~~a~~~ 120 (124)
T 2w2x_D 102 DKVEELFEWFQSIREITWK 120 (124)
T ss_dssp CCCHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 4578899999999988753
No 31
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=33.69 E-value=26 Score=21.49 Aligned_cols=18 Identities=11% Similarity=0.501 Sum_probs=15.0
Q ss_pred cChHHHHHHHHHHHHhhc
Q 036503 85 ENSEKLQTWRNALKEAAS 102 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~ 102 (112)
++++.++.|..||..++.
T Consensus 100 ~s~~e~~~Wi~ai~~~~~ 117 (123)
T 1wjm_A 100 KDEAEMSSWLRVVNAAIA 117 (123)
T ss_dssp SSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 357889999999998875
No 32
>3ro3_B Minsc, peptide of protein inscuteable homolog; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=33.30 E-value=34 Score=15.59 Aligned_cols=15 Identities=27% Similarity=0.523 Sum_probs=11.5
Q ss_pred hHHHHHHHHHHHHhh
Q 036503 87 SEKLQTWRNALKEAA 101 (112)
Q Consensus 87 ~e~v~~W~~AL~~v~ 101 (112)
-+-|++|.+-|.-.+
T Consensus 7 vDSV~rWmeDLr~MT 21 (22)
T 3ro3_B 7 VDSVQRWMEDLKLMT 21 (26)
T ss_pred hHHHHHHHHHHHhhc
Confidence 467999999887543
No 33
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=33.05 E-value=28 Score=22.98 Aligned_cols=21 Identities=33% Similarity=0.496 Sum_probs=17.2
Q ss_pred cChHHHHHHHHHHHHhhcccC
Q 036503 85 ENSEKLQTWRNALKEAASLSG 105 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~~G 105 (112)
++.+..+.|..||..|+.+..
T Consensus 96 ~s~ee~~eWi~aI~~v~~~~~ 116 (149)
T 1x1f_A 96 ENTESGEEWRGFILTVTELSV 116 (149)
T ss_dssp SSHHHHHHHHHHHHHHHHSSC
T ss_pred CCHHHHHHHHHHHHHHHcccC
Confidence 457888999999999988653
No 34
>2nrl_A Myoglobin; transport protein; HET: HEM; 0.91A {Thunnus atlanticus} PDB: 2nx0_A* 3qm5_A* 3qm6_A* 3qm7_A* 3qm8_A* 3qm9_A* 3qma_A* 1myt_A* 2nrm_A*
Probab=32.86 E-value=13 Score=24.21 Aligned_cols=44 Identities=5% Similarity=-0.020 Sum_probs=27.3
Q ss_pred eecCCcccccccCchHHHHHHHHHhhccChHHHHHHHHHHHHhhccc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEERSKENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~~~~~~e~v~~W~~AL~~v~~~~ 104 (112)
|+|+|.+...-...+-.++.++ .. -+++...-|..++..+++..
T Consensus 93 ~~V~p~~f~~~~~~Ll~~l~~~-~~--~t~e~~~AW~~~~~~v~~~l 136 (147)
T 2nrl_A 93 HKIPINNFKLISEVLVKVMQEK-AG--LDAGGQTALRNVMGIIIADL 136 (147)
T ss_dssp TCCCTHHHHHHHHHHHHHHHHH-SC--CCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHh-cc--CCHHHHHHHHHHHHHHHHHH
Confidence 4677776654333333444443 22 25777788999999988754
No 35
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=32.81 E-value=28 Score=20.75 Aligned_cols=19 Identities=16% Similarity=0.448 Sum_probs=15.4
Q ss_pred cChHHHHHHHHHHHHhhcc
Q 036503 85 ENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~ 103 (112)
++++..+.|..||..+..-
T Consensus 95 ~s~~e~~~Wi~al~~~~~~ 113 (118)
T 1v89_A 95 SSQAEMEEWVKFLRRVAGS 113 (118)
T ss_dssp SSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHcc
Confidence 3578889999999998753
No 36
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=32.13 E-value=31 Score=22.81 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=15.8
Q ss_pred cChHHHHHHHHHHHHhhcc
Q 036503 85 ENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~ 103 (112)
++++..+.|..||.++..-
T Consensus 104 ~s~~e~~~Wi~aL~~~i~~ 122 (164)
T 2lul_A 104 PSPQSRDLWVKKLKEEIKN 122 (164)
T ss_dssp SSHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 4578889999999999753
No 37
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=31.26 E-value=31 Score=20.09 Aligned_cols=18 Identities=6% Similarity=0.254 Sum_probs=14.6
Q ss_pred cChHHHHHHHHHHHHhhc
Q 036503 85 ENSEKLQTWRNALKEAAS 102 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~ 102 (112)
++++..+.|..||..+..
T Consensus 88 ~s~~e~~~Wi~ai~~~i~ 105 (108)
T 1u5d_A 88 TSPAEARDWVDQISFLLK 105 (108)
T ss_dssp SSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 357888999999998764
No 38
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.93 E-value=31 Score=20.51 Aligned_cols=20 Identities=25% Similarity=0.458 Sum_probs=15.9
Q ss_pred cChHHHHHHHHHHHHhhccc
Q 036503 85 ENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~~ 104 (112)
++++..+.|..||..+....
T Consensus 86 ~s~~e~~~Wi~ai~~~~~~~ 105 (115)
T 2dn6_A 86 SDKKKKQEWIQAIHSTIHLL 105 (115)
T ss_dssp SSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 35678899999999887643
No 39
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.77 E-value=31 Score=21.05 Aligned_cols=20 Identities=15% Similarity=0.340 Sum_probs=15.9
Q ss_pred cChHHHHHHHHHHHHhhccc
Q 036503 85 ENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~~ 104 (112)
++++..+.|..||..+....
T Consensus 87 ~s~~e~~~Wi~al~~~~~~~ 106 (120)
T 2d9x_A 87 TDAKERQHWVSRLQICTQHH 106 (120)
T ss_dssp SSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 35788999999999877543
No 40
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.43 E-value=35 Score=20.87 Aligned_cols=17 Identities=12% Similarity=0.319 Sum_probs=14.3
Q ss_pred cChHHHHHHHHHHHHhh
Q 036503 85 ENSEKLQTWRNALKEAA 101 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~ 101 (112)
++++..++|..||..+.
T Consensus 87 ~s~~e~~~Wi~al~~~~ 103 (119)
T 2dhk_A 87 ATKQAMLYWLQQLQMKR 103 (119)
T ss_dssp SSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 45788999999999875
No 41
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=30.36 E-value=32 Score=20.82 Aligned_cols=18 Identities=22% Similarity=0.519 Sum_probs=14.9
Q ss_pred cChHHHHHHHHHHHHhhc
Q 036503 85 ENSEKLQTWRNALKEAAS 102 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~ 102 (112)
++++..+.|..||..+..
T Consensus 103 ~s~~e~~~Wi~al~~~i~ 120 (127)
T 1fgy_A 103 PSPEEKEEWMKSIKASIS 120 (127)
T ss_dssp SSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhc
Confidence 357889999999998865
No 42
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=29.67 E-value=33 Score=20.05 Aligned_cols=16 Identities=31% Similarity=0.731 Sum_probs=12.9
Q ss_pred cChHHHHHHHHHHHHh
Q 036503 85 ENSEKLQTWRNALKEA 100 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v 100 (112)
++++..+.|..||..+
T Consensus 91 ~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 91 KDDEEMNTWIQAISSA 106 (106)
T ss_dssp SSHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhcC
Confidence 4578899999999763
No 43
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=29.66 E-value=40 Score=21.49 Aligned_cols=20 Identities=20% Similarity=0.292 Sum_probs=16.3
Q ss_pred cChHHHHHHHHHHHHhhccc
Q 036503 85 ENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~~ 104 (112)
++++..+.|.+||..+....
T Consensus 107 ~s~~e~~~Wi~ai~~a~~~~ 126 (130)
T 1v88_A 107 TSESDGRCWMDALELALKSG 126 (130)
T ss_dssp SSHHHHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHHHHHHhcC
Confidence 45788999999999987654
No 44
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=29.37 E-value=34 Score=20.43 Aligned_cols=19 Identities=16% Similarity=0.382 Sum_probs=15.5
Q ss_pred cChHHHHHHHHHHHHhhcc
Q 036503 85 ENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~ 103 (112)
++++..+.|..||..+..-
T Consensus 94 ~s~~e~~~Wi~al~~~i~~ 112 (117)
T 1v5u_A 94 QDVPSAQQWVDRIQSCLSS 112 (117)
T ss_dssp SSHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHHHHHHhcc
Confidence 4578899999999987654
No 45
>3g46_A Globin-1; oxygen transport, allostery, oxygen affinity, cytoplasm, heme, iron, metal-binding, oxygen storage/transport, oxygen binding; HET: HEM; 0.91A {Scapharca inaequivalvis} SCOP: a.1.1.2 PDB: 1nxf_A* 3g4q_A* 3g4r_A* 3g4u_A* 3g4v_A* 3g4w_A* 3g4y_A* 3g52_A* 3g53_A* 3uhg_A* 3uhs_A* 3uhk_A* 3uhi_A* 3uhn_A* 3ugy_A* 2auo_A* 2aup_A* 3uhr_A* 3uh5_A* 3uh3_A* ...
Probab=29.35 E-value=19 Score=23.34 Aligned_cols=41 Identities=5% Similarity=0.199 Sum_probs=27.1
Q ss_pred eecCCcccccccCchHHHHHHHHHhhccChHHHHHHHHHHHHhhc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEERSKENSEKLQTWRNALKEAAS 102 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~~~~~~e~v~~W~~AL~~v~~ 102 (112)
|+|+|.+... +|+++........-+++...-|..++..|++
T Consensus 104 ~~V~p~~f~~----~~~~ll~~l~~~~~t~e~~~AW~k~~~~va~ 144 (146)
T 3g46_A 104 RKISAAEFGK----INGPIKKVLASKNFGDKYANAWAKLVAVVQA 144 (146)
T ss_dssp TTCCHHHHGG----GHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 4667766554 4555555443323357888899999998875
No 46
>2vhb_A Hemoglobin; heme, respiratory protein, oxygen transport; HET: HEM; 1.76A {Vitreoscilla stercoraria} SCOP: a.1.1.2 PDB: 1vhb_A* 3vhb_A* 4vhb_A*
Probab=28.18 E-value=21 Score=22.84 Aligned_cols=42 Identities=14% Similarity=0.180 Sum_probs=27.2
Q ss_pred eecCCcccccccCchHHHHHHHHHh-hc--cChHHHHHHHHHHHHhhcc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEER-SK--ENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~-~~--~~~e~v~~W~~AL~~v~~~ 103 (112)
|+|+|.+... +|+++...-.. ++ -+++...-|..++..+++.
T Consensus 88 ~gV~p~~f~~----~~~~Ll~~l~~~lg~~~t~e~~~AW~~~~~~i~~~ 132 (146)
T 2vhb_A 88 AGVAAAHYPI----VGQELLGAIKEVLGDAATDDILDAWGKAYGVIADV 132 (146)
T ss_dssp HTCCGGGHHH----HHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHH----HHHHHHHHHHHHhCccCCHHHHHHHHHHHHHHHHH
Confidence 4677777654 45555544332 22 3577788899999988764
No 47
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=28.10 E-value=37 Score=20.72 Aligned_cols=18 Identities=28% Similarity=0.608 Sum_probs=14.8
Q ss_pred cChHHHHHHHHHHHHhhc
Q 036503 85 ENSEKLQTWRNALKEAAS 102 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~ 102 (112)
++.+....|..||..+..
T Consensus 93 ~s~~e~~~Wi~al~~~~~ 110 (125)
T 1unq_A 93 ETPEEREEWTTAIQTVAD 110 (125)
T ss_dssp SSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 457889999999998764
No 48
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=27.65 E-value=36 Score=19.95 Aligned_cols=19 Identities=26% Similarity=0.344 Sum_probs=15.2
Q ss_pred cChHHHHHHHHHHHHhhcc
Q 036503 85 ENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~ 103 (112)
++++..+.|..||..+...
T Consensus 76 ~s~~e~~~Wi~al~~a~~~ 94 (103)
T 3rcp_A 76 VNAAERQRWLVALGSSKAS 94 (103)
T ss_dssp SSHHHHHHHHHHHHTTSCC
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 4578899999999987654
No 49
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=27.48 E-value=43 Score=21.73 Aligned_cols=19 Identities=21% Similarity=0.681 Sum_probs=15.9
Q ss_pred cChHHHHHHHHHHHHhhcc
Q 036503 85 ENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~ 103 (112)
++++..+.|..||..++..
T Consensus 94 ~s~~e~~~Wi~ai~~~~~~ 112 (168)
T 2j59_M 94 EDRDDMLAWIKTIQESSNL 112 (168)
T ss_dssp SSHHHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 4678899999999988764
No 50
>3d1k_A Hemoglobin subunit alpha-1; antarctic FISH hemoglobin, intermediate R/T quaternary structure, oxidation pathway, heme, iron, metal-binding; HET: HEM; 1.25A {Dusky notothen} SCOP: a.1.1.2 PDB: 2aa1_A* 1t1n_A* 1la6_A* 3nfe_A* 3ng6_A* 2h8f_A* 1pbx_A* 1s5x_A* 1s5y_A* 1hbh_A* 2h8d_A* 2peg_A* 3gkv_A* 3gqg_A* 1v4x_A* 1v4u_A* 1v4w_A*
Probab=27.38 E-value=66 Score=20.49 Aligned_cols=43 Identities=19% Similarity=0.132 Sum_probs=28.1
Q ss_pred eecCCcccccccCchHHHHHHHHHh-hc--cChHHHHHHHHHHHHhhccc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEER-SK--ENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~-~~--~~~e~v~~W~~AL~~v~~~~ 104 (112)
|+|+|.+... +|+++...-.. ++ -+++...-|..++..+++..
T Consensus 92 ~~V~p~~f~~----~~~~ll~~l~~~lg~~~t~e~~~AW~~~~~~v~~~l 137 (142)
T 3d1k_A 92 LRVDPSNFKI----LNHCILVVISTMFPKEFTPEAHVSLDKFLSGVALAL 137 (142)
T ss_dssp SCCCGGGHHH----HHHHHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCChHHHHH----HHHHHHHHHHHHccccCCHHHHHHHHHHHHHHHHHH
Confidence 5677766654 46666554433 22 25777788999999988753
No 51
>2w72_C Human hemoglobin A; iron, heme, glycation, transport, acetylation, phosphoprotein, packing defects, disease mutation, distal site point mutation; HET: HEM SO4; 1.07A {Homo sapiens} PDB: 1j7s_A* 1qi8_A* 1j7y_A* 1o1i_A* 2w72_A* 1bzz_A* 1c7b_A* 1j7w_A* 1o1k_A* 1o1o_A* 1y0c_A* 1ydz_A* 3ia3_B* 1ird_A* 1a00_A* 1a0u_A* 1a0z_A* 1a3n_A* 1a9w_A* 1b86_A* ...
Probab=27.18 E-value=18 Score=23.14 Aligned_cols=43 Identities=12% Similarity=0.121 Sum_probs=27.6
Q ss_pred eecCCcccccccCchHHHHHHHHHhh-c--cChHHHHHHHHHHHHhhccc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEERS-K--ENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~~-~--~~~e~v~~W~~AL~~v~~~~ 104 (112)
|+|+|.+... +|+++...-... + -+++...-|..++..+++..
T Consensus 91 ~gV~p~~f~~----~~~~Ll~~l~~~lg~~~t~e~~~AW~~~~~~i~~~l 136 (141)
T 2w72_C 91 LRVDPVNFKL----LSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVL 136 (141)
T ss_dssp TCCCTHHHHH----HHHHHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHH----HHHHHHHHHHHHccccCCHHHHHHHHHHHHHHHHHH
Confidence 4677766554 455555543332 2 25777788999999988753
No 52
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=27.17 E-value=44 Score=20.02 Aligned_cols=17 Identities=29% Similarity=0.468 Sum_probs=14.4
Q ss_pred cChHHHHHHHHHHHHhh
Q 036503 85 ENSEKLQTWRNALKEAA 101 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~ 101 (112)
++++..+.|..||..+.
T Consensus 82 ~s~~e~~~Wi~~l~~~~ 98 (115)
T 2cod_A 82 EKEEERNDWISILLNAL 98 (115)
T ss_dssp SSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 35778899999999887
No 53
>3ubc_A Hemoglobin-like flavoprotein; oxygen-bound, autoxidation, nanotemplate, langmuir-blodgett, films, oxygen transport; HET: HEM; 1.65A {Methylacidiphilum infernorum V4} PDB: 3ubv_A* 3s1i_A* 3s1j_A*
Probab=26.88 E-value=35 Score=21.37 Aligned_cols=42 Identities=24% Similarity=0.233 Sum_probs=27.5
Q ss_pred eecCCcccccccCchHHHHHHHHHh-hc--cChHHHHHHHHHHHHhhcc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEER-SK--ENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~-~~--~~~e~v~~W~~AL~~v~~~ 103 (112)
|+|+|.+... +|+++...-.. ++ -+++...-|.+++..|++.
T Consensus 84 ~gV~p~~f~~----~~~~Ll~~l~~~lg~~~t~e~~~AW~~~~~~va~~ 128 (131)
T 3ubc_A 84 YGVVDSHYPL----VGDCLLKSIQEYLGQGFTEEAKAAWTKVYGIAAQV 128 (131)
T ss_dssp TTCCTTHHHH----HHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHH----HHHHHHHHHHHHhCccCCHHHHHHHHHHHHHHHHH
Confidence 5778877654 45555544332 22 2577778899999998864
No 54
>1ug7_A 2610208M17RIK protein; hypothetical protein FLJ12806, four helical UP-and-DOWN bundle, structural genomics; NMR {Mus musculus} SCOP: a.24.24.1
Probab=26.75 E-value=18 Score=23.94 Aligned_cols=18 Identities=28% Similarity=0.656 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHhhcccCc
Q 036503 89 KLQTWRNALKEAASLSGF 106 (112)
Q Consensus 89 ~v~~W~~AL~~v~~~~G~ 106 (112)
.+++|..+|.+.+...+|
T Consensus 15 ~v~kW~~sl~Ka~dfDsW 32 (128)
T 1ug7_A 15 LLQRWGASLRRGADFDSW 32 (128)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcH
Confidence 578999999999887765
No 55
>3bom_A Hemoglobin subunit alpha-4; FISH hemoglobin, structural genomics community request, protein structure initiative, PSI-2; HET: HEM; 1.35A {Oncorhynchus mykiss} PDB: 2r1h_A*
Probab=26.75 E-value=64 Score=20.60 Aligned_cols=42 Identities=17% Similarity=0.150 Sum_probs=27.6
Q ss_pred eecCCcccccccCchHHHHHHHHHh-hc--cChHHHHHHHHHHHHhhcc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEER-SK--ENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~-~~--~~~e~v~~W~~AL~~v~~~ 103 (112)
|+|+|.+... +|+++...-.. ++ -+++...-|..++..+++.
T Consensus 93 ~~V~p~~f~~----~~~~Ll~~l~~~lg~~~t~e~~~AW~~~~~~va~~ 137 (143)
T 3bom_A 93 LRVDPTNFKI----LAHNLIVVIAAYFPAEFTPEIHLSVDKFLQQLALA 137 (143)
T ss_dssp TCCCTTHHHH----HHHHHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred hCCCHhHHHH----HHHHHHHHHHHHccccCCHHHHHHHHHHHHHHHHH
Confidence 5677776654 45666554433 22 2577778899999988864
No 56
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=26.68 E-value=45 Score=19.82 Aligned_cols=20 Identities=15% Similarity=0.240 Sum_probs=15.8
Q ss_pred cChHHHHHHHHHHHHhhccc
Q 036503 85 ENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~~ 104 (112)
++++..+.|..||..+....
T Consensus 84 ~s~~e~~~Wi~ai~~~~~~~ 103 (113)
T 1pls_A 84 AFLEERDAWVRDINKAIKCI 103 (113)
T ss_dssp SSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcc
Confidence 35788899999999887543
No 57
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=26.30 E-value=46 Score=20.05 Aligned_cols=19 Identities=21% Similarity=0.524 Sum_probs=15.3
Q ss_pred cChHHHHHHHHHHHHhhcc
Q 036503 85 ENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~ 103 (112)
++++..+.|..||..+...
T Consensus 94 ~s~~e~~~W~~al~~~i~~ 112 (125)
T 1eaz_A 94 DSPEEMHSWIKAVSGAIVA 112 (125)
T ss_dssp SSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 4578889999999988654
No 58
>2zp2_A Kinase A inhibitor; KIPI, histidine kinase inhibitor, ATP-binding, nucleotide- binding, protein kinase inhibitor, sporulation; 3.01A {Bacillus subtilis}
Probab=25.90 E-value=67 Score=21.41 Aligned_cols=9 Identities=56% Similarity=0.763 Sum_probs=7.5
Q ss_pred ceeEeEEee
Q 036503 51 QVVIPVFYR 59 (112)
Q Consensus 51 ~~ViPVFY~ 59 (112)
.+.|||.|+
T Consensus 2 ~~~IPV~Y~ 10 (141)
T 2zp2_A 2 IVEIPVCYG 10 (141)
T ss_dssp EEEEEEEES
T ss_pred EEEEeEEcC
Confidence 467999998
No 59
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.38 E-value=45 Score=20.14 Aligned_cols=18 Identities=17% Similarity=0.483 Sum_probs=14.6
Q ss_pred cChHHHHHHHHHHHHhhc
Q 036503 85 ENSEKLQTWRNALKEAAS 102 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~ 102 (112)
++++....|..||..+..
T Consensus 84 ~s~~e~~~Wi~al~~~~~ 101 (114)
T 2da0_A 84 EDEQDYVAWISVLTNSKE 101 (114)
T ss_dssp SSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 457889999999997754
No 60
>1sct_A Hemoglobin II (carbonmonoxy) (alpha chain); oxygen transport; HET: HEM; 2.00A {Scapharca inaequivalvis} SCOP: a.1.1.2
Probab=25.08 E-value=36 Score=22.00 Aligned_cols=42 Identities=2% Similarity=0.069 Sum_probs=27.2
Q ss_pred eecCCcccccccCchHHHHHHHHHh-hc--cChHHHHHHHHHHHHhhcc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEER-SK--ENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~-~~--~~~e~v~~W~~AL~~v~~~ 103 (112)
|+|+|.+... +|+++...-.. ++ -+++...-|.+++..|++.
T Consensus 105 ~gV~p~~f~~----~~~~ll~~l~~~lg~~~t~e~~~AW~k~~~~va~~ 149 (150)
T 1sct_A 105 RKISGDAFGA----IVEPMKETLKARMGNYYSDDVAGAWAALVGVVQAA 149 (150)
T ss_dssp TTCCHHHHGG----GHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHTT
T ss_pred cCCCHHHHHH----HHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHh
Confidence 5677776655 45555543322 22 2577788899999998864
No 61
>2vyw_A Hemoglobin; trematode, oxygen binding; HET: HEM; 1.8A {Fasciola hepatica}
Probab=24.10 E-value=27 Score=22.72 Aligned_cols=42 Identities=14% Similarity=0.086 Sum_probs=26.6
Q ss_pred eecCCcccccccCchHHHHHHHHHhhccChHHHHHHHHHHHHhhcc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEERSKENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~~~~~~e~v~~W~~AL~~v~~~ 103 (112)
|+|+|.+...-...+-.++.++ .-+++...-|..++..|++.
T Consensus 102 ~~V~p~~f~~~~~~Ll~~l~~~----~~t~e~~~AW~k~~~~va~~ 143 (148)
T 2vyw_A 102 RPVTKDQFTGAAPIFIKFFQGL----LKKQEDKDAIEKFLLHVMQA 143 (148)
T ss_dssp SSCCHHHHHHTHHHHHHHHHHH----CCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHHH
Confidence 5677766655333333444333 33577788999999988764
No 62
>2wy4_A Single domain haemoglobin; heme, transport, oxygen transport; HET: HEM; 1.35A {Campylobacter jejuni}
Probab=23.80 E-value=27 Score=22.07 Aligned_cols=42 Identities=17% Similarity=0.246 Sum_probs=26.6
Q ss_pred eecCCcccccccCchHHHHHHHHHh-hccChHHHHHHHHHHHHhhcc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEER-SKENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~-~~~~~e~v~~W~~AL~~v~~~ 103 (112)
|+|+|.+... +|+++...-.. .+..++-..-|..++..+++.
T Consensus 87 ~gv~p~~f~~----~~~~ll~~l~~~lg~~~e~~~AW~~~~~~ia~~ 129 (140)
T 2wy4_A 87 LGVKEEHYPI----VGACLLKAIKNLLNPDEATLKAWEVAYGKIAKF 129 (140)
T ss_dssp TTCCGGGHHH----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHH----HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 4677776654 45555544333 343355667899999988864
No 63
>2r80_A Hemoglobin subunit alpha-A; oxygen tranport/storage, heme, iron, metal-binding, oxygen transport, transport, oxygen binding; HET: HEM; 1.44A {Columba livia} PDB: 3mju_A* 3dhr_A* 3mjp_A* 1faw_A* 3eok_A* 3k8b_A* 2qmb_A* 3fs4_A* 3a59_A* 1a4f_A* 1hv4_A* 2zfb_A* 1c40_A* 3at5_A* 3at6_A*
Probab=23.70 E-value=71 Score=20.37 Aligned_cols=43 Identities=16% Similarity=0.208 Sum_probs=27.9
Q ss_pred eecCCcccccccCchHHHHHHHHHh-hc--cChHHHHHHHHHHHHhhccc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEER-SK--ENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~-~~--~~~e~v~~W~~AL~~v~~~~ 104 (112)
|+|+|.+... +|+++...-.. ++ -+++...-|..++..+++..
T Consensus 91 ~~V~p~~f~~----~~~~Ll~~l~~~lg~~~t~e~~~AW~~~~~~va~~l 136 (141)
T 2r80_A 91 LRVDPVNFKL----LGHCFLVVVAVHFPSLLTPEVHASLDKFVLAVGTVL 136 (141)
T ss_dssp SCCCTHHHHH----HHHHHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHH----HHHHHHHHHHHHccccCCHHHHHHHHHHHHHHHHHH
Confidence 5667766554 45666554332 22 25677788999999988754
No 64
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=23.68 E-value=49 Score=20.27 Aligned_cols=18 Identities=17% Similarity=0.422 Sum_probs=14.5
Q ss_pred cChHHHHHHHHHHHHhhc
Q 036503 85 ENSEKLQTWRNALKEAAS 102 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~ 102 (112)
++++..+.|..||..+..
T Consensus 111 ~s~~e~~~Wi~al~~~i~ 128 (134)
T 2y7b_A 111 DTKEERDLWMQKLNQVLV 128 (134)
T ss_dssp SSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 457889999999998754
No 65
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=23.27 E-value=52 Score=20.63 Aligned_cols=18 Identities=22% Similarity=0.647 Sum_probs=14.7
Q ss_pred cChHHHHHHHHHHHHhhc
Q 036503 85 ENSEKLQTWRNALKEAAS 102 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~ 102 (112)
++++.++.|..||..+..
T Consensus 107 ~s~~e~~~Wi~aI~~~i~ 124 (129)
T 2p0d_A 107 DHETELRAWHRALRTVIE 124 (129)
T ss_dssp SCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 457889999999998764
No 66
>1cg5_A Protein (hemoglobin); oxygen transport; HET: HEM; 1.60A {Dasyatis akajei} SCOP: a.1.1.2 PDB: 1cg8_A*
Probab=23.16 E-value=24 Score=22.77 Aligned_cols=43 Identities=16% Similarity=0.006 Sum_probs=27.7
Q ss_pred eecCCcccccccCchHHHHHHHHHh-h-ccChHHHHHHHHHHHHhhccc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEER-S-KENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~-~-~~~~e~v~~W~~AL~~v~~~~ 104 (112)
|+|+|.+... +|+++...-.. + .-+++...-|..++..|++..
T Consensus 92 ~~V~p~~f~~----~~~~ll~~l~~~lg~~t~e~~~AW~k~~~~va~~l 136 (141)
T 1cg5_A 92 LLVDPHNFHL----FADCIVVTLAVNLQAFTPVTHCAVDKFLELVAYEL 136 (141)
T ss_dssp TCCCTHHHHH----HHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHH----HHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHH
Confidence 4667766554 45555554332 2 235777788999999988754
No 67
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=22.84 E-value=58 Score=20.10 Aligned_cols=18 Identities=17% Similarity=0.346 Sum_probs=14.8
Q ss_pred cChHHHHHHHHHHHHhhc
Q 036503 85 ENSEKLQTWRNALKEAAS 102 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~ 102 (112)
++++..+.|..||..+..
T Consensus 107 ~s~~e~~~Wi~ai~~~i~ 124 (128)
T 2rlo_A 107 ASFEERDAWVQAIESQIL 124 (128)
T ss_dssp SSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 467889999999998754
No 68
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=22.79 E-value=55 Score=22.62 Aligned_cols=21 Identities=19% Similarity=0.289 Sum_probs=17.0
Q ss_pred cChHHHHHHHHHHHHhhcccC
Q 036503 85 ENSEKLQTWRNALKEAASLSG 105 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~~G 105 (112)
.+.+..+.|..||..+.+-.|
T Consensus 191 ~s~~e~~~Wi~aL~~ai~~lG 211 (211)
T 1u5e_A 191 ASPKDAEEWVQQLKFILQDLG 211 (211)
T ss_dssp SSHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHcC
Confidence 357889999999999876554
No 69
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=22.45 E-value=53 Score=20.72 Aligned_cols=18 Identities=11% Similarity=0.431 Sum_probs=14.9
Q ss_pred cChHHHHHHHHHHHHhhc
Q 036503 85 ENSEKLQTWRNALKEAAS 102 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~ 102 (112)
++.+....|..||..+..
T Consensus 107 ~s~~e~~~Wi~al~~ai~ 124 (150)
T 1wg7_A 107 DSEVEMEEWITILNKILQ 124 (150)
T ss_dssp SSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 357888999999998865
No 70
>1xq5_A Hemoglobin alpha-1 chain; FISH hemoglobin, rapid oxidation, structural genomics, protein structure initiative, PSI, CESG; HET: HEM; 1.90A {Perca flavescens} SCOP: a.1.1.2 PDB: 3bj1_A* 3bj2_A* 3bj3_A* 3bcq_A*
Probab=22.21 E-value=81 Score=20.08 Aligned_cols=42 Identities=17% Similarity=0.164 Sum_probs=27.2
Q ss_pred eecCCcccccccCchHHHHHHHHHh-hc--cChHHHHHHHHHHHHhhcc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEER-SK--ENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~-~~--~~~e~v~~W~~AL~~v~~~ 103 (112)
|+|+|.+... +|+++...-.. ++ -+++...-|..++..+++.
T Consensus 93 ~~V~p~~f~~----~~~~ll~~l~~~lg~~~t~e~~~AW~k~~~~va~~ 137 (143)
T 1xq5_A 93 LRVDPANFKI----LSHCILVLLAVKFPKDFTPEVHISYDKFFSALARA 137 (143)
T ss_dssp SCCCTHHHHH----HHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHH----HHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHH
Confidence 5677766554 45555554332 22 2577778899999988864
No 71
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.73 E-value=61 Score=21.53 Aligned_cols=16 Identities=13% Similarity=0.414 Sum_probs=13.8
Q ss_pred ChHHHHHHHHHHHHhh
Q 036503 86 NSEKLQTWRNALKEAA 101 (112)
Q Consensus 86 ~~e~v~~W~~AL~~v~ 101 (112)
+++...+|.+||..++
T Consensus 96 sEeqy~~WMaA~rlAs 111 (137)
T 2ys3_A 96 DEQQYARWMAGCRLAS 111 (137)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhc
Confidence 5788899999999777
No 72
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=21.57 E-value=23 Score=20.56 Aligned_cols=16 Identities=19% Similarity=0.613 Sum_probs=12.7
Q ss_pred cChHHHHHHHHHHHHh
Q 036503 85 ENSEKLQTWRNALKEA 100 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v 100 (112)
++++..+.|..||.++
T Consensus 77 ~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 77 QDPDHRQQWIDAIEQH 92 (94)
T ss_dssp CSSCCTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhh
Confidence 3567788999999875
No 73
>1q1f_A Neuroglobin; globin fold, heme protein, oxygen storage/transport complex; HET: HEM; 1.50A {Mus musculus} SCOP: a.1.1.2 PDB: 1w92_A* 3gk9_A* 2vry_A* 3gkt_A* 3gln_A* 1oj6_A*
Probab=21.56 E-value=46 Score=21.13 Aligned_cols=43 Identities=14% Similarity=0.154 Sum_probs=28.5
Q ss_pred eecCCcccccccCchHHHHHHHHHh-hc--cChHHHHHHHHHHHHhhccc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEER-SK--ENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~-~~--~~~e~v~~W~~AL~~v~~~~ 104 (112)
|+|+|.+... +|+++...-.. ++ -+++...-|..++..+++..
T Consensus 99 ~gV~p~~f~~----~~~~ll~~l~~~lg~~~t~e~~~AW~~~~~~v~~~m 144 (151)
T 1q1f_A 99 VGVRLSSFST----VGESLLYMLEKSLGPDFTPATRTAWSRLYGAVVQAM 144 (151)
T ss_dssp HTCCTTHHHH----HHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHH----HHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHH
Confidence 6778877744 55555544332 22 25777889999999988754
No 74
>4hrt_B Hemoglobin B chain; oxygen transport, globin fold, oxygen; HET: HEM; 1.46A {Scapharca inaequivalvis} PDB: 1sct_B*
Probab=21.49 E-value=57 Score=21.09 Aligned_cols=41 Identities=2% Similarity=0.161 Sum_probs=26.0
Q ss_pred eecCCcccccccCchHHHHHHHHHh-hc--cChHHHHHHHHHHHHhhc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEER-SK--ENSEKLQTWRNALKEAAS 102 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~-~~--~~~e~v~~W~~AL~~v~~ 102 (112)
|+|+|.+... +|+++...-.. ++ -+++...-|..++..|++
T Consensus 107 ~gV~p~~f~~----~~~~Ll~~l~~~lg~~~t~e~~~AW~k~~~~va~ 150 (152)
T 4hrt_B 107 RQISADEFGE----IVGPLRQTLKARMGNYFDEDTVAAWASLVAVVQA 150 (152)
T ss_dssp -CCCHHHHGG----GHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHH----HHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHH
Confidence 5677766654 45555544332 22 257778899999998875
No 75
>4aqr_D Calcium-transporting ATPase 8, plasma membrane-TY; Ca-binding protein-hydrolase complex, plasma-membrane calciu; 1.95A {Arabidopsis thaliana}
Probab=21.04 E-value=58 Score=18.52 Aligned_cols=14 Identities=43% Similarity=0.691 Sum_probs=10.1
Q ss_pred hHHHHHHHHHHHHhh
Q 036503 87 SEKLQTWRNALKEAA 101 (112)
Q Consensus 87 ~e~v~~W~~AL~~v~ 101 (112)
.|..++||.| +-|-
T Consensus 3 ~e~L~rWR~a-~lVl 16 (57)
T 4aqr_D 3 IERLQQWRKA-ALVL 16 (57)
T ss_dssp HHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHH-HHHh
Confidence 4778999998 4443
No 76
>2r80_B Hemoglobin subunit beta; oxygen tranport/storage, heme, iron, metal-binding, oxygen transport, transport, oxygen binding; HET: HEM; 1.44A {Columba livia} PDB: 3dhr_B* 3mju_B* 1faw_B* 3k8b_B* 2qmb_B* 3eok_B* 1a4f_B* 1c40_B* 1hv4_B* 2zfb_B* 3mjp_B* 1hbr_B* 3fs4_B* 3a59_B* 1wmu_B* 1v75_B* 2z6n_B* 3at5_B* 3at6_B*
Probab=20.79 E-value=52 Score=21.11 Aligned_cols=43 Identities=21% Similarity=0.311 Sum_probs=27.4
Q ss_pred eecCCcccccccCchHHHHHHHHHh-hc--cChHHHHHHHHHHHHhhccc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEER-SK--ENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~-~~--~~~e~v~~W~~AL~~v~~~~ 104 (112)
|+|+|.+... +|+++...-.. ++ -+++...-|..++..+++..
T Consensus 96 ~~V~p~~f~~----~~~~ll~~l~~~lg~~~t~e~~~AW~~~~~~va~~l 141 (146)
T 2r80_B 96 LHVDPENFRL----LGDILVIILAAHFGKDFTPECQAAWQKLVRVVAHAL 141 (146)
T ss_dssp SCCCTHHHHH----HHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHH----HHHHHHHHHHHHccccCCHHHHHHHHHHHHHHHHHH
Confidence 6677777654 45555443322 22 25777788999999988753
No 77
>1wmu_A Hemoglobin D alpha chain; hemoglobin D, reptilia, the aldabra giant tortoise, geochelone gigantea, oxygen storage/transport complex; HET: HEM; 1.65A {Dipsochelys dussumieri} SCOP: a.1.1.2 PDB: 1v75_A* 2z6n_A* 1hbr_A*
Probab=20.58 E-value=34 Score=21.84 Aligned_cols=43 Identities=14% Similarity=0.217 Sum_probs=26.6
Q ss_pred eecCCcccccccCchHHHHHHHHHh-hc--cChHHHHHHHHHHHHhhccc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEER-SK--ENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~-~~--~~~e~v~~W~~AL~~v~~~~ 104 (112)
|+|+|.+... +|+++...-.. ++ -+++...-|..++..+++..
T Consensus 91 ~~V~p~~f~~----~~~~ll~~l~~~lg~~~t~e~~~AW~~~~~~v~~~l 136 (141)
T 1wmu_A 91 LRVDPVNFKL----LSHCFQVVLGAHLGREYTPQVQVAYDKFLAAVSAVL 136 (141)
T ss_dssp SCCCHHHHHH----HHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred hCCCHHHHHH----HHHHHHHHHHHHccccCCHHHHHHHHHHHHHHHHHH
Confidence 4566665544 45555543322 22 25777788999999988754
No 78
>1h97_A Globin-3; HET: HEM; 1.17A {Paramphistomum epiclitum} SCOP: a.1.1.2 PDB: 1kfr_A*
Probab=20.57 E-value=31 Score=22.43 Aligned_cols=42 Identities=14% Similarity=0.112 Sum_probs=26.9
Q ss_pred eecCCcccccccCchHHHHHHHHHhhccChHHHHHHHHHHHHhhcc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEERSKENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~~~~~~e~v~~W~~AL~~v~~~ 103 (112)
|+|+|.+-.. +|+++...-....-+++...-|..++..|++.
T Consensus 101 ~~V~p~~f~~----~~~~Ll~~l~~~~~t~e~~~AW~k~~~~va~~ 142 (147)
T 1h97_A 101 RKVTKDEFMS----GEPIFTKYFQNLVKDAEGKAAVEKFLKHVFPM 142 (147)
T ss_dssp SSCCHHHHHH----HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 5677766654 34454443333233577788999999988764
No 79
>3bom_B Hemoglobin subunit beta-4; FISH hemoglobin, structural genomics community request, protein structure initiative, PSI-2; HET: HEM; 1.35A {Oncorhynchus mykiss} PDB: 2r1h_B* 3bcq_B* 1spg_B*
Probab=20.44 E-value=49 Score=21.37 Aligned_cols=45 Identities=13% Similarity=0.110 Sum_probs=26.7
Q ss_pred eecCCcccccccCchHHHHHHHH-HhhccChHHHHHHHHHHHHhhcc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLE-ERSKENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~-~~~~~~~e~v~~W~~AL~~v~~~ 103 (112)
|+|+|.+...-...+-.++.++- .. .-+++...-|.+++..+++.
T Consensus 96 ~~V~p~~f~~~~~~Ll~~l~~~lg~~-~~t~e~~~AW~k~~~~va~~ 141 (147)
T 3bom_B 96 LFVDPDNFRLLADCITVCVAAKLGPA-VFSADTQEAFQKFLAVVVSA 141 (147)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHHHHHH-HSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHcCcc-cCCHHHHHHHHHHHHHHHHH
Confidence 56777776553333333443332 12 02467778899999988864
No 80
>1unk_A Colicin E7; immunity protein, dimeric structure, RNAse active site; 1.80A {Escherichia coli} SCOP: a.28.2.1 PDB: 1mz8_A 1ayi_A 2jaz_A 2jb0_A 2jbg_A 7cei_A 1znv_A 1cei_A 1ujz_A 2erh_A
Probab=20.41 E-value=57 Score=20.06 Aligned_cols=15 Identities=33% Similarity=0.880 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHhhcccCc
Q 036503 88 EKLQTWRNALKEAASLSGF 106 (112)
Q Consensus 88 e~v~~W~~AL~~v~~~~G~ 106 (112)
+.|.+||.| -+++||
T Consensus 70 ~~iKeWRa~----nG~pgF 84 (87)
T 1unk_A 70 KEIKEWRAA----NGKPGF 84 (87)
T ss_dssp HHHHHHHHH----TTCCCC
T ss_pred HHHHHHHHH----cCCccc
Confidence 568899998 666665
No 81
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=20.38 E-value=67 Score=20.26 Aligned_cols=20 Identities=15% Similarity=0.194 Sum_probs=15.2
Q ss_pred cChHHHHHHHHHHHHhhccc
Q 036503 85 ENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~~ 104 (112)
.+.+..+.|..||..+....
T Consensus 102 ~s~~e~~~Wi~al~~~i~~~ 121 (148)
T 1u5f_A 102 ASPKDAEEWVQQLKFILQDL 121 (148)
T ss_dssp SSHHHHHHHHHHHHHHCC--
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 35788999999999987643
No 82
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=20.30 E-value=64 Score=19.53 Aligned_cols=19 Identities=16% Similarity=0.251 Sum_probs=15.1
Q ss_pred cChHHHHHHHHHHHHhhcc
Q 036503 85 ENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 85 ~~~e~v~~W~~AL~~v~~~ 103 (112)
++++..+.|..||..+..-
T Consensus 95 ~s~~e~~~Wi~al~~~i~~ 113 (126)
T 1fao_A 95 KTGVEADEWIKILRWKLSQ 113 (126)
T ss_dssp SSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 3578889999999987654
No 83
>2w72_B Human hemoglobin A; iron, heme, glycation, transport, acetylation, phosphoprotein, packing defects, disease mutation, distal site point mutation; HET: HEM SO4; 1.07A {Homo sapiens} PDB: 1j7w_B* 1qi8_B* 1j7y_B* 1dxu_B* 1a0u_B* 1a0z_B* 1gli_B* 1j7s_B* 1o1l_B* 1o1n_B* 1y0t_B* 1y0w_B* 1o1o_B* 1ye2_B* 1y35_B* 1y22_B* 1ye0_B* 1dxt_B* 1y5f_B* 1ird_B* ...
Probab=20.24 E-value=54 Score=21.02 Aligned_cols=43 Identities=14% Similarity=0.196 Sum_probs=26.9
Q ss_pred eecCCcccccccCchHHHHHHHHHh-hc--cChHHHHHHHHHHHHhhccc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEER-SK--ENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~-~~--~~~e~v~~W~~AL~~v~~~~ 104 (112)
|+|+|.+... +|+++...-.. ++ -+++...-|..++..+++.-
T Consensus 96 ~~V~p~~f~~----~~~~Ll~~l~~~lg~~~t~e~~~AW~~~~~~va~~l 141 (146)
T 2w72_B 96 LHVDPENFRL----LGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANAL 141 (146)
T ss_dssp SCCCTHHHHH----HHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred cCCChHHHHH----HHHHHHHHHHHHccccCCHHHHHHHHHHHHHHHHHH
Confidence 4667766554 45555543322 22 25777788999999988753
No 84
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=20.22 E-value=57 Score=20.32 Aligned_cols=15 Identities=40% Similarity=0.920 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHhhcccCc
Q 036503 88 EKLQTWRNALKEAASLSGF 106 (112)
Q Consensus 88 e~v~~W~~AL~~v~~~~G~ 106 (112)
++|.+||.| -+++||
T Consensus 69 ~~IKeWRa~----nG~pgF 83 (94)
T 3u43_A 69 KEIKEWRAA----NGKSGF 83 (94)
T ss_dssp HHHHHHHHH----TTCCCC
T ss_pred HHHHHHHHH----cCCccc
Confidence 568899998 666765
No 85
>2hfv_A Hypothetical protein RPA1041; NESG, GFT-alpha+beta, structural genomics, PSI-2, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: d.58.5.5
Probab=20.20 E-value=69 Score=20.02 Aligned_cols=23 Identities=17% Similarity=0.192 Sum_probs=17.1
Q ss_pred chHhHHHHHHhhCCCceeeeC-CC
Q 036503 14 TLLAIYIQISLDKNIRTFIDD-QL 36 (112)
Q Consensus 14 ~F~shL~~aL~~~gI~~F~D~-~l 36 (112)
.-++++...|...||.+|+-| .+
T Consensus 33 v~a~~~k~LLe~aGI~~fv~De~m 56 (97)
T 2hfv_A 33 VLLSAVGALLDGADIGHLVLDQNM 56 (97)
T ss_dssp HHHHHHHHHHHHTTCCEECCSCCC
T ss_pred HHHHHHHHHHHhCCCCEEEcCCcc
Confidence 345666666788999999977 35
No 86
>3mkb_B Hemoglobin subunit beta; oxygen affinity, shortfin MAK storage, oxygen transport; HET: HEM; 1.90A {Isurus oxyrinchus} SCOP: a.1.1.2
Probab=20.07 E-value=56 Score=21.13 Aligned_cols=45 Identities=16% Similarity=0.225 Sum_probs=26.8
Q ss_pred eecCCcccccccCchHHHHHHHHH-hhccChHHHHHHHHHHHHhhccc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEE-RSKENSEKLQTWRNALKEAASLS 104 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~-~~~~~~e~v~~W~~AL~~v~~~~ 104 (112)
++|+|.+-+--...+-.++..+-. .+ +++-..-|.+++..|++.-
T Consensus 86 l~V~p~~f~~lg~~Ll~~l~~~lg~~f--t~e~~~AW~k~~~~va~~l 131 (136)
T 3mkb_B 86 LHIDPGSFHLLTDSFIVELAHLKKVAF--TPFVFAVWIKFFQVVIDAI 131 (136)
T ss_dssp SCCCGGGHHHHHHHHHHHHHHHHGGGS--CHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCceeeehhHHHHHHHHHHhhcc--chhHHHHHHHHHHHHHHHH
Confidence 356776665533333333333321 22 5777788999999988754
No 87
>1sct_B Hemoglobin II (carbonmonoxy) (beta chain); oxygen transport; HET: HEM; 2.00A {Scapharca inaequivalvis} SCOP: a.1.1.2
Probab=20.00 E-value=54 Score=21.07 Aligned_cols=42 Identities=2% Similarity=0.141 Sum_probs=26.8
Q ss_pred eecCCcccccccCchHHHHHHHHHh-hc--cChHHHHHHHHHHHHhhcc
Q 036503 58 YRVDPSDVRNQTGSFGDSFSKLEER-SK--ENSEKLQTWRNALKEAASL 103 (112)
Q Consensus 58 Y~V~psdVr~q~g~fg~af~~~~~~-~~--~~~e~v~~W~~AL~~v~~~ 103 (112)
|+|+|.+... +|+++...-.. ++ -+++...-|..++..|++.
T Consensus 106 ~~V~p~~f~~----~~~~Ll~~l~~~lg~~~t~e~~~AW~~~~~~va~~ 150 (151)
T 1sct_B 106 RQISADEFGE----IVGPLRQTLKARMGNYFDEDTVAAWASLVAVVQAS 150 (151)
T ss_dssp TTCCHHHHHT----THHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHH----HHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHh
Confidence 5667766554 45555544322 22 2567788899999998864
Done!