BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036504
(141 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1
Length = 93
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 52 DVKEGHVAVLAMDGNDQAKRFIVPLNYLSHPTFMSLLEQAAEEYGFDRG-GALTVPCQPS 110
DV +G+ AV D+ +RF +P++YL+ P+F LL QA EE+G+D G LT+PC+
Sbjct: 25 DVPKGYAAVYV---GDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEE 81
Query: 111 ELEKILAE 118
E + A
Sbjct: 82 EFLNVTAH 89
>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max PE=2 SV=1
Length = 92
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 52 DVKEGHVAVLAMDGNDQAKRFIVPLNYLSHPTFMSLLEQAAEEYGFDRG-GALTVPCQPS 110
+V +G++ V D+ +RF++P++YL+ P+F LL QA EE+G+D G LT+PC+
Sbjct: 24 EVPKGYLVVYV---GDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKED 80
Query: 111 ELEKILAEQGD 121
E + + D
Sbjct: 81 EFLTVTSHLND 91
>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2 SV=1
Length = 82
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 52 DVKEGHVAVLAMDGNDQAKRFIVPLNYLSHPTFMSLLEQAAEEYGFDRG-GALTVPCQPS 110
D +G++AV ++ KRF++P++Y++ P+F LL QA EE+G+D G LT+PC
Sbjct: 16 DAPKGYLAVYV---GEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEE 72
Query: 111 ELEKI 115
++I
Sbjct: 73 VFQRI 77
>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2 SV=1
Length = 82
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 4/57 (7%)
Query: 52 DVKEGHVAVLAMDGNDQAKRFIVPLNYLSHPTFMSLLEQAAEEYGFDRG-GALTVPC 107
D +G++AV ++ KRF++P++YL+ P+F LL QA EE+G+D G LT+PC
Sbjct: 16 DAPKGYLAVYV---GEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPC 69
>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2 SV=1
Length = 90
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 52 DVKEGHVAVLAMDGNDQAKRFIVPLNYLSHPTFMSLLEQAAEEYGFDR-GGALTVPCQPS 110
DV++G++AV ++ +RF++P++YL+ P+F LL QA EE+G+ G LT+PC
Sbjct: 24 DVEKGYLAVYV---GEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSED 80
Query: 111 ELEKI 115
+ I
Sbjct: 81 VFQHI 85
>sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var.
radiata GN=ARG7 PE=2 SV=1
Length = 92
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 52 DVKEGHVAVLAMDGNDQAKRFIVPLNYLSHPTFMSLLEQAAEEYGFDRG-GALTVPCQPS 110
D +G++AV + KRF++P+++L+ P F LL QA EE+G+D G LT+PC
Sbjct: 24 DAPKGYLAVYV---GENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSED 80
Query: 111 ELEKI 115
+ I
Sbjct: 81 LFQHI 85
>sp|Q8C0E3|TRI47_MOUSE Tripartite motif-containing protein 47 OS=Mus musculus GN=Trim47
PE=2 SV=2
Length = 641
Score = 31.2 bits (69), Expect = 2.3, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 61 LAMDGNDQAKRFIVPLNYLSHPTFMSLLEQAAEEYGFDRG 100
L + G KR + P+NY PT + EQ E DRG
Sbjct: 444 LQLFGTKGVKRVLCPINYPESPTRFTHCEQVLGEGALDRG 483
>sp|Q9HPY4|FOLD_HALSA Bifunctional protein FolD OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=folD PE=3 SV=1
Length = 297
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 106 PCQPSELEKILAEQG-DDDGSSVNVKWRS 133
PC P ++K+LA QG D DG+ V V RS
Sbjct: 138 PCTPHGVQKLLAHQGVDPDGAEVVVVGRS 166
>sp|P12866|STE6_YEAST Alpha-factor-transporting ATPase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=STE6 PE=1 SV=1
Length = 1290
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 26 LLGKKKILFADECEEIGDS-STNYVPEDVKEGHVAVLAM 63
LL K KIL DEC DS S++ + E VK+G A+L M
Sbjct: 1204 LLRKSKILILDECTSALDSVSSSIINEIVKKGPPALLTM 1242
>sp|Q96LD4|TRI47_HUMAN Tripartite motif-containing protein 47 OS=Homo sapiens GN=TRIM47
PE=1 SV=2
Length = 638
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 61 LAMDGNDQAKRFIVPLNYLSHPTFMSLLEQAAEEYGFDRG 100
L + G KR + P+NY PT + EQ E DRG
Sbjct: 441 LQLFGTKGVKRVLCPINYPLSPTRFTHCEQVLGEGALDRG 480
>sp|Q75JU2|WRIP1_DICDI ATPase WRNIP1 OS=Dictyostelium discoideum GN=wrnip1 PE=3 SV=1
Length = 876
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 14 IKIVVKKIQNSLLLGKKKILFADE 37
IK V+ K +N+L GKK ILF DE
Sbjct: 272 IKEVIDKARNTLQFGKKTILFIDE 295
>sp|A7Z4X1|BIOF1_BACA2 8-amino-7-oxononanoate synthase 1 OS=Bacillus amyloliquefaciens
(strain FZB42) GN=RBAM_016840 PE=3 SV=1
Length = 391
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Query: 77 NYL---SHPTFMSLLEQAAEEYGFDRGGALTVP---CQPSELEKILA 117
NYL SHP + ++AAEE+G G T+ +ELEK LA
Sbjct: 48 NYLGLTSHPRLVEAAKRAAEEFGAGTGSVRTIAGTFTMHNELEKKLA 94
>sp|E7F4V6|TIKI2_DANRE Metalloprotease TIKI2 OS=Danio rerio GN=trabd2b PE=2 SV=1
Length = 518
Score = 29.3 bits (64), Expect = 7.7, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 33 LFADECEEIGDSSTNYVPEDVKEGHVAVLAMD-GNDQAKRFIVPLNYLSHPTFMSLLEQA 91
LF+D IGDS+T + + G+V V +Q +R L LS PT S L+ A
Sbjct: 436 LFSDLWVRIGDSTTPHPSIRITNGYVTVEPPQIRQEQQQRLRERLKPLSEPTNPSALDSA 495
Query: 92 A 92
A
Sbjct: 496 A 496
>sp|Q60341|FRHB_METJA Coenzyme F420 hydrogenase subunit beta OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=frhB PE=3 SV=1
Length = 287
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 85 MSLLEQAAEEYGFDRGGALTVPCQPSELEKIL 116
+S+L+ A EYG ++ G + PCQ + K++
Sbjct: 87 ISVLKSAVREYGCEKIGVVGTPCQVRAVRKLM 118
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,424,286
Number of Sequences: 539616
Number of extensions: 2160441
Number of successful extensions: 4510
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 4495
Number of HSP's gapped (non-prelim): 27
length of query: 141
length of database: 191,569,459
effective HSP length: 105
effective length of query: 36
effective length of database: 134,909,779
effective search space: 4856752044
effective search space used: 4856752044
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)