Query         036504
Match_columns 141
No_of_seqs    156 out of 625
Neff          4.6 
Searched_HMMs 13730
Date          Mon Mar 25 03:48:34 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036504.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036504hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1unda_ a.14.1.1 (A:) Advillin  52.4     1.5 0.00011   24.6   0.1   18   78-95      1-18  (36)
  2 d1zj8a1 d.58.36.1 (A:327-406)   34.5      26  0.0019   21.0   4.2   65   55-120     3-73  (80)
  3 d1z3xa2 a.261.1.1 (A:88-235) G  30.1     1.1 8.2E-05   32.0  -3.7   29   51-84    118-146 (148)
  4 d1yu5x1 a.14.1.1 (X:10-76) Vil  29.4     5.1 0.00037   25.0  -0.1   19   77-95     31-49  (67)
  5 d1y6ia2 a.261.1.1 (A:83-233) M  28.3     1.6 0.00012   31.3  -3.1   32   50-86    117-148 (151)
  6 d1vi7a2 d.58.11.2 (A:138-208)   26.9      38  0.0028   19.6   3.8   52   69-122     2-61  (71)
  7 d2bkfa1 d.15.2.2 (A:1-85) Next  25.9      75  0.0054   20.0   5.6   46   65-113    12-66  (85)
  8 d1qusa_ d.2.1.6 (A:) 36 kDa so  25.9      19  0.0014   28.0   2.8   23   77-99     14-36  (322)
  9 d1nn7a_ d.42.1.2 (A:) Potassiu  25.8     2.6 0.00019   27.6  -2.1   58   58-122     2-61  (105)
 10 d1ujsa_ a.14.1.1 (A:) Actin-bi  25.0     7.2 0.00052   25.6   0.0   20   77-96     46-65  (88)
 11 d1qzpa_ a.14.1.1 (A:) Dematin   22.7     5.8 0.00042   24.8  -0.8   19   77-95     32-50  (68)
 12 d1yu8x1 a.14.1.1 (X:42-76) Vil  22.0     8.8 0.00064   21.0  -0.0   17   79-95      1-17  (35)
 13 d1fc4a_ c.67.1.4 (A:) 2-amino-  21.6      47  0.0034   25.3   4.3   50   70-119    45-102 (401)
 14 d1t1da_ d.42.1.2 (A:) Shaker p  21.5      12 0.00088   24.1   0.6   57   58-121     3-62  (100)
 15 d2al3a1 d.15.1.2 (A:10-85) Tet  21.3      49  0.0036   20.6   3.6   38   57-100     2-39  (76)
 16 d3kvta_ d.42.1.2 (A:) akv3.1 v  20.9     3.4 0.00025   27.0  -2.4   58   57-122     3-64  (103)
 17 d1tjya_ c.93.1.1 (A:) AI-2 rec  20.9      40  0.0029   23.0   3.5   29   70-98      4-35  (316)
 18 d1y74b1 a.194.1.1 (B:83-132) P  20.2      19  0.0014   21.2   1.2   20   77-96     26-49  (50)

No 1  
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.43  E-value=1.5  Score=24.60  Aligned_cols=18  Identities=28%  Similarity=0.595  Sum_probs=16.6

Q ss_pred             CcCcHHHHHHHHHHHHhc
Q 036504           78 YLSHPTFMSLLEQAAEEY   95 (141)
Q Consensus        78 yL~hP~F~~LL~~aeeEf   95 (141)
                      ||+.-.|++++.++.+||
T Consensus         1 yLsd~dF~~vFgmsr~eF   18 (36)
T d1unda_           1 YLSEQDFVSVFGITRGQF   18 (36)
T ss_dssp             CCCHHHHHHHHSSCHHHH
T ss_pred             CCCHHHHHHHHCcCHHHH
Confidence            789999999999999987


No 2  
>d1zj8a1 d.58.36.1 (A:327-406) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=34.54  E-value=26  Score=20.98  Aligned_cols=65  Identities=15%  Similarity=0.100  Sum_probs=38.9

Q ss_pred             CCeEEEEEecCCCceeeEEEccCCcCcHHHHHHHHHHHHhcCC-----CCCCceeec-CCHHHHHHHHHHhc
Q 036504           55 EGHVAVLAMDGNDQAKRFIVPLNYLSHPTFMSLLEQAAEEYGF-----DRGGALTVP-CQPSELEKILAEQG  120 (141)
Q Consensus        55 kG~~aVYVg~g~e~~~RfvVp~~yL~hP~F~~LL~~aeeEfG~-----~~~G~L~IP-C~~~~Fe~lL~~~~  120 (141)
                      ..|+=||--+.+.-.-|..+|.-.++...+..|.+.|+ +||-     +....|.|+ =+.+..+.++..+.
T Consensus         3 ~dh~Gv~~q~dG~~~vri~~p~G~it~~ql~~la~ia~-~yg~g~i~lTtrq~l~l~~i~~~~~~~v~~~L~   73 (80)
T d1zj8a1           3 IDHVGVQRLKNGLNAVGVAPIAGRVSGTILTAVADLMA-RAGSDRIRFTPYQKLVILDIPDALLDDLIAGLD   73 (80)
T ss_dssp             CCCCEEEECTTSSEEEEEBCBTTEEEHHHHHHHHHHHH-HHTCCCEEECTTSCEEEEEECHHHHHHHHHHHH
T ss_pred             CCcceEeeecCCcEEEEEeccCcEECHHHHHHHHHHHH-HhCCCeEEECCCCcEEEcCCCHHHHHHHHHHHH
Confidence            34445554322211356677888898888888887655 5662     334556666 45666666666653


No 3  
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=30.06  E-value=1.1  Score=32.02  Aligned_cols=29  Identities=21%  Similarity=0.354  Sum_probs=19.2

Q ss_pred             cCCCCCeEEEEEecCCCceeeEEEccCCcCcHHH
Q 036504           51 EDVKEGHVAVLAMDGNDQAKRFIVPLNYLSHPTF   84 (141)
Q Consensus        51 ~~v~kG~~aVYVg~g~e~~~RfvVp~~yL~hP~F   84 (141)
                      ..+|+||+|+.-  .   .+-+.|=-..|+||.|
T Consensus       118 l~AP~GHLP~~~--~---lrg~~~~~~~l~h~a~  146 (148)
T d1z3xa2         118 LSAPRGHLPLTN--Q---LRGVQVLNALLNHPAW  146 (148)
T ss_dssp             TTSCTTCCSCCC--C---TTCSHHHHHHHTCGGG
T ss_pred             CCCCCCCCCcCC--c---cchHHHHHHHhcCccc
Confidence            357999999764  1   3334444467888876


No 4  
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=29.39  E-value=5.1  Score=25.01  Aligned_cols=19  Identities=21%  Similarity=0.382  Sum_probs=18.1

Q ss_pred             CCcCcHHHHHHHHHHHHhc
Q 036504           77 NYLSHPTFMSLLEQAAEEY   95 (141)
Q Consensus        77 ~yL~hP~F~~LL~~aeeEf   95 (141)
                      .||+.--|++++.|+.+||
T Consensus        31 ~yLsd~dF~~vFgms~~eF   49 (67)
T d1yu5x1          31 NHLSDEDFKAVFGMTRSAF   49 (67)
T ss_dssp             GGSCHHHHHHHHSSCHHHH
T ss_pred             hhCCHHHHHHHHCcCHHHH
Confidence            7999999999999999997


No 5  
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=28.34  E-value=1.6  Score=31.27  Aligned_cols=32  Identities=22%  Similarity=0.349  Sum_probs=19.7

Q ss_pred             CcCCCCCeEEEEEecCCCceeeEEEccCCcCcHHHHH
Q 036504           50 PEDVKEGHVAVLAMDGNDQAKRFIVPLNYLSHPTFMS   86 (141)
Q Consensus        50 ~~~v~kG~~aVYVg~g~e~~~RfvVp~~yL~hP~F~~   86 (141)
                      +..+|+||+|+.-.=.+   -|  +--..|+||.|.+
T Consensus       117 ~l~AP~GHLP~~~~lrG---~~--~~~~l~~h~~~~~  148 (151)
T d1y6ia2         117 DLSAPQGHLPLLNQLRG---VR--VAESLYRHPVWSQ  148 (151)
T ss_dssp             STTSCTTCCSCCCCTTC---TH--HHHHHHTSTHHHH
T ss_pred             cCCCCCCCCCccchhhh---HH--HHHHHHcCcchhh
Confidence            34679999998642111   11  2335789998864


No 6  
>d1vi7a2 d.58.11.2 (A:138-208) Hypothetical protein YigZ, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=26.86  E-value=38  Score=19.57  Aligned_cols=52  Identities=17%  Similarity=0.263  Sum_probs=37.6

Q ss_pred             eeeEEEccCCcCcHHHHHHHHHHH-----HhcCCCCCCc--eeec-CCHHHHHHHHHHhcCC
Q 036504           69 AKRFIVPLNYLSHPTFMSLLEQAA-----EEYGFDRGGA--LTVP-CQPSELEKILAEQGDD  122 (141)
Q Consensus        69 ~~RfvVp~~yL~hP~F~~LL~~ae-----eEfG~~~~G~--L~IP-C~~~~Fe~lL~~~~~~  122 (141)
                      +.+|.+.++|=....++.||++..     .+||  .+=.  |.|| -.+..|..-|..+..+
T Consensus         2 ~t~~~l~~dY~~~~~v~~~L~~~~~~i~~~~y~--~~V~l~v~vp~~~~~~f~~~l~d~t~G   61 (71)
T d1vi7a2           2 LTEYTLQCEYHQLTGIEALLGQCDGKIINSDYQ--AFVLLRVALPAAKVAEFSAKLADFSRG   61 (71)
T ss_dssp             CEEEEEEECTTTHHHHHHHHHHTTCEEEEEEES--SSEEEEEEECSSTHHHHHHHHHHHHTT
T ss_pred             ceEEEEEeccccHHHHHHHHHHCCCEEEeeeec--cEEEEEEEECHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999875     3565  3323  4445 3467888777776554


No 7  
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.91  E-value=75  Score=20.04  Aligned_cols=46  Identities=13%  Similarity=0.235  Sum_probs=33.5

Q ss_pred             CCCceeeEEEccCCcCcHHHHHHHHHHHHhcCCC--------CC-CceeecCCHHHHH
Q 036504           65 GNDQAKRFIVPLNYLSHPTFMSLLEQAAEEYGFD--------RG-GALTVPCQPSELE  113 (141)
Q Consensus        65 g~e~~~RfvVp~~yL~hP~F~~LL~~aeeEfG~~--------~~-G~L~IPC~~~~Fe  113 (141)
                      +++ .+||.++..  +++.|.+|..+-+.-||..        .+ --++|.|+.++=|
T Consensus        12 ~~d-t~RF~ls~~--~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~E   66 (85)
T d2bkfa1          12 KNE-IQSFLVSDP--ENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEE   66 (85)
T ss_dssp             TTE-EEEEEESCG--GGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHH
T ss_pred             CCc-eEEEEecCC--CCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHHH
Confidence            344 799998543  4678999999999888842        22 4588999987654


No 8  
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=25.88  E-value=19  Score=28.04  Aligned_cols=23  Identities=22%  Similarity=0.645  Sum_probs=21.4

Q ss_pred             CCcCcHHHHHHHHHHHHhcCCCC
Q 036504           77 NYLSHPTFMSLLEQAAEEYGFDR   99 (141)
Q Consensus        77 ~yL~hP~F~~LL~~aeeEfG~~~   99 (141)
                      +|.+||-|++++++..+++||+.
T Consensus        14 dya~~p~v~~Fi~~la~~~G~s~   36 (322)
T d1qusa_          14 DFANNPNAQQFIDKMVNKHGFDR   36 (322)
T ss_dssp             TTTTCHHHHHHHHHHHHHHCCCH
T ss_pred             CcccCHHHHHHHHHHHHHhCCCH
Confidence            89999999999999999999974


No 9  
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=25.81  E-value=2.6  Score=27.65  Aligned_cols=58  Identities=17%  Similarity=0.217  Sum_probs=38.4

Q ss_pred             EEEEEecCCCceeeEEEccCCc-CcHHHHHHHHHHHHhcCC-CCCCceeecCCHHHHHHHHHHhcCC
Q 036504           58 VAVLAMDGNDQAKRFIVPLNYL-SHPTFMSLLEQAAEEYGF-DRGGALTVPCQPSELEKILAEQGDD  122 (141)
Q Consensus        58 ~aVYVg~g~e~~~RfvVp~~yL-~hP~F~~LL~~aeeEfG~-~~~G~L~IPC~~~~Fe~lL~~~~~~  122 (141)
                      +.+.|| |    .+|.+..+-| ++|-.  +|.+......+ +.+|.+-|--+...|++||.-++.+
T Consensus         2 I~LNVG-G----~~f~t~~~TL~~~p~s--~l~~~~~~~~~~~~~~~~FiDRdp~~F~~IL~ylR~G   61 (105)
T d1nn7a_           2 IVLNVS-G----TRFQTWQDTLERYPDT--LLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYRTG   61 (105)
T ss_dssp             EEEEET-T----EEEEECHHHHHTSCSS--STTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHHHHS
T ss_pred             EEEEEC-C----EEEEEeHHHHhcCCCC--CccccccccCcCCCCCcEEEeCCHHHHHHHHHHHhcC
Confidence            456674 3    8999988766 44431  12222222223 3468999999999999999998753


No 10 
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.97  E-value=7.2  Score=25.58  Aligned_cols=20  Identities=20%  Similarity=0.379  Sum_probs=18.5

Q ss_pred             CCcCcHHHHHHHHHHHHhcC
Q 036504           77 NYLSHPTFMSLLEQAAEEYG   96 (141)
Q Consensus        77 ~yL~hP~F~~LL~~aeeEfG   96 (141)
                      .||++--|++++.|+.+||-
T Consensus        46 ~YLSdedF~~vFgMsr~eF~   65 (88)
T d1ujsa_          46 RHLSQEEFYQVFGMTISEFD   65 (88)
T ss_dssp             GGSCTTHHHHHHSSCHHHHT
T ss_pred             hcCCHHHHHHHHCcCHHHHH
Confidence            79999999999999999983


No 11 
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.68  E-value=5.8  Score=24.85  Aligned_cols=19  Identities=26%  Similarity=0.438  Sum_probs=18.0

Q ss_pred             CCcCcHHHHHHHHHHHHhc
Q 036504           77 NYLSHPTFMSLLEQAAEEY   95 (141)
Q Consensus        77 ~yL~hP~F~~LL~~aeeEf   95 (141)
                      .||+.--|++++.|+.+||
T Consensus        32 ~yLsd~dF~~vFgms~~eF   50 (68)
T d1qzpa_          32 RHLSAEDFSRVFAMSPEEF   50 (68)
T ss_dssp             GGBCHHHHHHHSSSCHHHH
T ss_pred             hhCCHHHHHHHHCcCHHHH
Confidence            8999999999999999997


No 12 
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=22.03  E-value=8.8  Score=21.02  Aligned_cols=17  Identities=18%  Similarity=0.395  Sum_probs=13.7

Q ss_pred             cCcHHHHHHHHHHHHhc
Q 036504           79 LSHPTFMSLLEQAAEEY   95 (141)
Q Consensus        79 L~hP~F~~LL~~aeeEf   95 (141)
                      |+.-.|++++.|+.+||
T Consensus         1 Lsd~dF~~vfgmsr~eF   17 (35)
T d1yu8x1           1 LSDEDFKAVFGMTRSAF   17 (35)
T ss_dssp             SCHHHHHHHHSSCHHHH
T ss_pred             CCHHHHHHHHCCCHHHH
Confidence            56677888888888886


No 13 
>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}
Probab=21.56  E-value=47  Score=25.29  Aligned_cols=50  Identities=28%  Similarity=0.439  Sum_probs=30.6

Q ss_pred             eeEE--EccCCc---CcHHHHHHHHHHHHhcCCCCCCc-eeecCCH--HHHHHHHHHh
Q 036504           70 KRFI--VPLNYL---SHPTFMSLLEQAAEEYGFDRGGA-LTVPCQP--SELEKILAEQ  119 (141)
Q Consensus        70 ~Rfv--Vp~~yL---~hP~F~~LL~~aeeEfG~~~~G~-L~IPC~~--~~Fe~lL~~~  119 (141)
                      ++|+  ..-+||   +||.+++....+-+.||...-+. +..-...  ..+|..|+..
T Consensus        45 ~~~l~f~s~dYLGl~~hp~v~~a~~~a~~~~g~~~~~sr~~~g~~~~~~~lE~~lA~~  102 (401)
T d1fc4a_          45 SHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAF  102 (401)
T ss_dssp             CEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHH
T ss_pred             CEEEEEEccccccccCCHHHHHHHHHHHHHhCCCcccceeeccCcHHHHHHHHHHHHh
Confidence            5564  244676   39999999999999999754332 1111121  2456666654


No 14 
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=21.48  E-value=12  Score=24.07  Aligned_cols=57  Identities=18%  Similarity=0.146  Sum_probs=38.0

Q ss_pred             EEEEEecCCCceeeEEEccCCcCc-H--HHHHHHHHHHHhcCCCCCCceeecCCHHHHHHHHHHhcC
Q 036504           58 VAVLAMDGNDQAKRFIVPLNYLSH-P--TFMSLLEQAAEEYGFDRGGALTVPCQPSELEKILAEQGD  121 (141)
Q Consensus        58 ~aVYVg~g~e~~~RfvVp~~yL~h-P--~F~~LL~~aeeEfG~~~~G~L~IPC~~~~Fe~lL~~~~~  121 (141)
                      +.+.|| |    ++|.+..+-|.. |  .|..|..... .+ -+.+|.+-|--+...|++||.-++.
T Consensus         3 I~LNVG-G----~~f~t~~~tL~~~p~s~l~~l~~~~~-~~-~~~~g~~FiDRdp~~F~~IL~flR~   62 (100)
T d1t1da_           3 VVINVS-G----LRFETQLKTLNQFPDTLLGNPQKRNR-YY-DPLRNEYFFDRNRPSFDAILYFYQS   62 (100)
T ss_dssp             EEEEET-T----EEEEEEHHHHHTSTTSTTTCHHHHGG-GE-ETTTTEEEECSCSTTHHHHHHHHHT
T ss_pred             EEEEEC-C----EEEEEeHHHHhhCCCchhHHHHhCCC-cC-CCCCCeEEEecCHHHHHHHHHHHhc
Confidence            456774 3    899998766543 3  3333332211 11 2446999999999999999999874


No 15 
>d2al3a1 d.15.1.2 (A:10-85) Tether containing UBX domain for GLUT4 (Tug) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.26  E-value=49  Score=20.64  Aligned_cols=38  Identities=24%  Similarity=0.418  Sum_probs=26.6

Q ss_pred             eEEEEEecCCCceeeEEEccCCcCcHHHHHHHHHHHHhcCCCCC
Q 036504           57 HVAVLAMDGNDQAKRFIVPLNYLSHPTFMSLLEQAAEEYGFDRG  100 (141)
Q Consensus        57 ~~aVYVg~g~e~~~RfvVp~~yL~hP~F~~LL~~aeeEfG~~~~  100 (141)
                      ++.|..-.    .+|..|++. - .-...+.|++|=+.|||+.+
T Consensus         2 ~V~Vl~~~----~rR~~VKvt-P-~t~l~~VL~eaC~k~~~~~~   39 (76)
T d2al3a1           2 AVSVLAPN----GRRHTVKVT-P-STVLLQVLEDTCRRQDFNPS   39 (76)
T ss_dssp             CEEEECTT----SCEEEECCC-T-TSBHHHHHHHHHHHTTCCGG
T ss_pred             cEEEECCC----CcEEEEEeC-C-CcCHHHHHHHHHHHhCCChh
Confidence            35555533    389999886 2 33567888999999998653


No 16 
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=20.91  E-value=3.4  Score=26.95  Aligned_cols=58  Identities=16%  Similarity=0.134  Sum_probs=39.6

Q ss_pred             eEEEEEecCCCceeeEEEccCCcCc-H--HHHHHHHHHHHhcCCC-CCCceeecCCHHHHHHHHHHhcCC
Q 036504           57 HVAVLAMDGNDQAKRFIVPLNYLSH-P--TFMSLLEQAAEEYGFD-RGGALTVPCQPSELEKILAEQGDD  122 (141)
Q Consensus        57 ~~aVYVg~g~e~~~RfvVp~~yL~h-P--~F~~LL~~aeeEfG~~-~~G~L~IPC~~~~Fe~lL~~~~~~  122 (141)
                      .+.+-|| |    ++|.+..+-|.. |  .|..++   +....+. .+|.+-|--++..|++||.-++.+
T Consensus         3 rI~LNVG-G----~~F~t~~~tL~~~~~s~l~~~~---~~~~~~~~~~~~~fiDRdp~~F~~IL~ylR~g   64 (103)
T d3kvta_           3 RVIINVG-G----IRHETYKATLKKIPATRLSRLT---EGMLNYDPVLNEYFFDRHPGVFAQIINYYRSG   64 (103)
T ss_dssp             EEEEEET-T----EEEEEEHHHHTTSCSSTTTTCC---TTSTTEETTTTEEEECSCTTTHHHHHHHHHHS
T ss_pred             EEEEEEC-C----EEEEEeHHHHhhCccchhHHHH---cCCCccCCCCCcEEecCCHHHHHHHHHHHccC
Confidence            4566775 2    899998887653 4  332222   2222333 368999999999999999998754


No 17 
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=20.87  E-value=40  Score=22.97  Aligned_cols=29  Identities=21%  Similarity=0.201  Sum_probs=21.7

Q ss_pred             eeEEEccCCcCcHHHHHHHH---HHHHhcCCC
Q 036504           70 KRFIVPLNYLSHPTFMSLLE---QAAEEYGFD   98 (141)
Q Consensus        70 ~RfvVp~~yL~hP~F~~LL~---~aeeEfG~~   98 (141)
                      +|..+=+..++||.|+.+.+   ++.+++||+
T Consensus         4 ~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~   35 (316)
T d1tjya_           4 ERIAFIPKLVGVGFFTSGGNGAQEAGKALGID   35 (316)
T ss_dssp             CEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred             CEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence            55656677899999999974   455688874


No 18 
>d1y74b1 a.194.1.1 (B:83-132) Peripheral plasma membrane protein cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.22  E-value=19  Score=21.16  Aligned_cols=20  Identities=45%  Similarity=0.786  Sum_probs=15.4

Q ss_pred             CCcCcHHHHHHHHH----HHHhcC
Q 036504           77 NYLSHPTFMSLLEQ----AAEEYG   96 (141)
Q Consensus        77 ~yL~hP~F~~LL~~----aeeEfG   96 (141)
                      ..|+.|-|+.||.-    |.+.||
T Consensus        26 ~lL~~PH~~aLL~aHD~VA~k~Y~   49 (50)
T d1y74b1          26 RILTQPHFMALLQTHDVVAHEVYS   49 (50)
T ss_dssp             HHHHSHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHhCHHHHHHHHHHHHHHHHhcc
Confidence            46899999999953    666666


Done!