BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 036506
         (86 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
           SV=1
          Length = 310

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/49 (63%), Positives = 33/49 (67%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEVAIV 60
           C VCL  + DG K R LP C H FHV+CID WFQS STCPLCR  V  V
Sbjct: 120 CAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGSV 168


>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
           SV=1
          Length = 324

 Score = 72.0 bits (175), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/43 (62%), Positives = 32/43 (74%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCR 54
           C++CL  +  G K R LP+C H FHVECID WFQS STCP+CR
Sbjct: 127 CSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICR 169


>sp|Q9LUL6|ATL61_ARATH Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana
           GN=ATL61 PE=3 SV=1
          Length = 204

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 38/58 (65%)

Query: 8   YYCYCTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEVAIVIARQR 65
           Y   C VCL  ++DG K R LP C H FHVECID+W QS STCP+CR  V +  +R R
Sbjct: 84  YVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVCLKQSRTR 141


>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
           SV=1
          Length = 376

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/43 (60%), Positives = 28/43 (65%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCR 54
           C VCL   S+  K R LP C H FH+ CID W QS STCPLCR
Sbjct: 143 CAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCR 185


>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
           SV=2
          Length = 349

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/43 (60%), Positives = 28/43 (65%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCR 54
           C VCL+  SD  K R LP C H FH+ CID W  S STCPLCR
Sbjct: 207 CAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCR 249


>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
           SV=2
          Length = 304

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/43 (58%), Positives = 29/43 (67%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCR 54
           C VCL    + +  R LP C+H FHV+CID WF S STCPLCR
Sbjct: 119 CAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCR 161


>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
           SV=1
          Length = 375

 Score = 65.5 bits (158), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 23/47 (48%), Positives = 31/47 (65%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEVA 58
           C+VCL    D +K R +P C H FH++CID W Q+ + CPLCR  V+
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVS 184


>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
           GN=ATL12 PE=3 SV=1
          Length = 390

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/48 (50%), Positives = 31/48 (64%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEVAI 59
           C+VCL    D +  R LP+C+H FH+ CID W +  +TCPLCR  V I
Sbjct: 124 CSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNI 171


>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
           GN=ATL49 PE=3 SV=1
          Length = 423

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/43 (60%), Positives = 27/43 (62%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCR 54
           C VCL       K R LP+C H FHVECID W  S STCPLCR
Sbjct: 126 CPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCR 168


>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
           SV=1
          Length = 369

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/43 (58%), Positives = 28/43 (65%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCR 54
           C VCL   S+  K R LP C H FH++CID W  S STCPLCR
Sbjct: 144 CAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCR 186


>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
           PE=1 SV=2
          Length = 398

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEVAIVIA 62
           C +CL+   D +  R LP+C H FH  CIDAW ++  TCP+CR  +A  +A
Sbjct: 128 CAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVA 178


>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
           SV=2
          Length = 407

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/46 (54%), Positives = 29/46 (63%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEV 57
           C VCL      +  R LP+CKH FHVEC+D W  + STCPLCR  V
Sbjct: 146 CAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRV 191


>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
           SV=2
          Length = 404

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEV 57
           C+VCL+   D +  R +P+C H FH  CIDAW +S +TCPLCR ++
Sbjct: 144 CSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADL 189


>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
           japonica GN=Os04g0590900 PE=2 SV=2
          Length = 383

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 31/50 (62%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEVAIVI 61
           C+VCL   SDG+  R LP C H FH +CID W +S S CPLCR  +  V 
Sbjct: 157 CSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITFVT 206


>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
           GN=EL5.1 PE=1 SV=1
          Length = 325

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/44 (56%), Positives = 30/44 (68%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRI 55
           C VCL  + DG++ R LP C H FH EC+D W  S STCPLCR+
Sbjct: 134 CAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRL 177


>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
           SV=1
          Length = 327

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/43 (51%), Positives = 27/43 (62%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCR 54
           C +CL+   D +  R +P C H FH  CID W  SRSTCP+CR
Sbjct: 128 CAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCR 170


>sp|Q570X5|ATL58_ARATH RING-H2 finger protein ATL58 OS=Arabidopsis thaliana GN=ATL58 PE=2
           SV=1
          Length = 261

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEVAIVIARQRRNHQD 70
           C+VCL       K +++P CKH FH++CID W  S +TCPLCR+  A++ +R R++  D
Sbjct: 100 CSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLCRL--ALIPSRSRQSQDD 156


>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
           PE=1 SV=1
          Length = 381

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/43 (53%), Positives = 30/43 (69%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCR 54
           C VCL+   D +  R +P+C H FH  CIDAW +S++TCPLCR
Sbjct: 118 CPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCR 160


>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
           SV=1
          Length = 362

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 15/75 (20%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRI--------------EV 57
           C+VCL    + +  R LP+C H FH+ CID W +S S CPLCR                V
Sbjct: 142 CSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTASVGQNV 201

Query: 58  AIVIARQRRN-HQDG 71
           ++V+A Q  + HQ G
Sbjct: 202 SVVVANQSNSAHQTG 216


>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
           SV=2
          Length = 356

 Score = 63.5 bits (153), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/43 (53%), Positives = 28/43 (65%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCR 54
           C+VCL    + +  R LP+C H FHV CID W +S S CPLCR
Sbjct: 159 CSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCR 201


>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
           SV=2
          Length = 235

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 34/56 (60%)

Query: 2   TAAKCPYYCYCTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEV 57
           +A    +   C+VCL    D +  R +P CKH FHV CID WF S S+CPLCR ++
Sbjct: 66  SAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQI 121


>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
           SV=1
          Length = 181

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 29/43 (67%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCR 54
           C +CL    DG+K R LP+C H FHV CID W  SRS+CP CR
Sbjct: 114 CLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCR 156


>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
           SV=2
          Length = 413

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 22/49 (44%), Positives = 31/49 (63%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEVAIV 60
           C VCL+   + +  R LP+C H FH+ CID W  S + CPLCR  +A++
Sbjct: 177 CPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMI 225


>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
           SV=1
          Length = 227

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 33/46 (71%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEV 57
           C+VCL    +  + R LP+C H FHV+CID WF+SRSTCPLCR  V
Sbjct: 108 CSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPV 153


>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
           SV=1
          Length = 381

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/47 (46%), Positives = 31/47 (65%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEVA 58
           C+VCL+   + +K R +P C H FH++CID W Q  + CPLCR  V+
Sbjct: 134 CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVS 180


>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
           GN=ATL53 PE=3 SV=2
          Length = 310

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 36/57 (63%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEVAIVIARQRRNH 68
           C++CL   ++ +  R LP+C H FHV CID W +S S CPLCR ++ +   +Q  +H
Sbjct: 155 CSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPTTQQPEHH 211


>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
           PE=1 SV=1
          Length = 622

 Score = 62.4 bits (150), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 3/56 (5%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEVAIVIARQRRN 67
           C+VC+   ++G K R+LP C H +H+ CID W    STCP+CR   A+++A  R +
Sbjct: 568 CSVCITEYTEGNKLRKLP-CSHEYHIHCIDRWLSENSTCPICR--RAVLVASNRES 620


>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
           PE=2 SV=1
          Length = 639

 Score = 62.4 bits (150), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 3/56 (5%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEVAIVIARQRRN 67
           C+VC+   ++G K R+LP C H +HV CID W    STCP+CR   A+++A  R +
Sbjct: 585 CSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICR--RAVLVAGNRES 637


>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
           PE=1 SV=2
          Length = 368

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/47 (46%), Positives = 28/47 (59%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEVA 58
           C +CL+   D +  R LP+C H FH  CI AW Q   TCP+CR  +A
Sbjct: 124 CAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLA 170


>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
           PE=1 SV=2
          Length = 432

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/48 (45%), Positives = 31/48 (64%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEVAI 59
           C+VCL      +  R LP+C+H FH+ CID W +  +TCPLCR  V++
Sbjct: 123 CSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSM 170


>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
           SV=1
          Length = 257

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 33/46 (71%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEV 57
           C+VCL    +  + R LP+C H FHV+CID WF+SRS+CPLCR  V
Sbjct: 113 CSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPV 158


>sp|Q9SRM0|ATL66_ARATH RING-H2 finger protein ATL66 OS=Arabidopsis thaliana GN=ATL66 PE=2
           SV=1
          Length = 158

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 33/46 (71%)

Query: 14  VCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEVAI 59
           +CL G  +G+K + LP C HC+H EC+D W ++ S+CPLCR+ + +
Sbjct: 109 ICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRV 154


>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
           PE=2 SV=1
          Length = 757

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 3/56 (5%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEVAIVIARQRRN 67
           C+VC+   ++G K R+LP C H +H+ CID W    STCP+CR   A+++A  R +
Sbjct: 703 CSVCITEYTEGNKLRKLP-CSHEYHIHCIDRWLSENSTCPICR--RAVLVAGNRES 755


>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
           SV=1
          Length = 185

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 30/43 (69%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCR 54
           C +CL   +DG++ R LP C H FHVECID W  SRS+CP CR
Sbjct: 102 CAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCR 144


>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
           SV=2
          Length = 472

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/43 (55%), Positives = 27/43 (62%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCR 54
           C VCL       K R LP+C H FH++CID W  S STCPLCR
Sbjct: 134 CAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176


>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
           SV=3
          Length = 323

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/43 (48%), Positives = 29/43 (67%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCR 54
           C +CL+ + D +  R LP C H FH++CID W  S +TCP+CR
Sbjct: 124 CAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCR 166


>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
          Length = 600

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 1/43 (2%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCR 54
           C+VC+   ++G K R+LP C H +HV CID W    STCP+CR
Sbjct: 546 CSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICR 587


>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
          Length = 624

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 1/43 (2%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCR 54
           C+VC+   ++G K R+LP C H +HV CID W    STCP+CR
Sbjct: 570 CSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICR 611


>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
           PE=1 SV=1
          Length = 236

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 31/46 (67%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEV 57
           C VCL  + +  K R LP CKH FHV+C+D W  + STCP+CR EV
Sbjct: 108 CAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEV 153


>sp|Q9LUZ9|ATL63_ARATH RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2
           SV=1
          Length = 308

 Score = 58.9 bits (141), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/53 (47%), Positives = 30/53 (56%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEVAIVIARQ 64
           C +CL     G   R+L  C H FHVECID W  S STCPLCR  V   ++ +
Sbjct: 138 CVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDE 190


>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
           SV=1
          Length = 217

 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 29/45 (64%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIE 56
           C VCL  + +    R LP CKH FHV C+D W  ++STCP+CR E
Sbjct: 100 CAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTE 144


>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
           SV=1
          Length = 347

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 2/47 (4%)

Query: 9   YCYCTVCLDGISDGQKFRRLPECKHCFHVECIDAWF-QSRSTCPLCR 54
           Y  C +CLD   DG K R LP C H +H  C+D W  Q+R TCP+C+
Sbjct: 227 YDVCAICLDEYEDGDKLRVLP-CAHAYHSRCVDPWLTQTRKTCPICK 272


>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
           SV=1
          Length = 350

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 2/47 (4%)

Query: 9   YCYCTVCLDGISDGQKFRRLPECKHCFHVECIDAWF-QSRSTCPLCR 54
           Y  C +CLD   DG K R LP C H +H  C+D W  Q+R TCP+C+
Sbjct: 227 YDVCAICLDEYEDGDKLRVLP-CAHAYHSRCVDPWLTQTRKTCPICK 272


>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
           GN=ATL50 PE=3 SV=1
          Length = 210

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 28/43 (65%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCR 54
           C VCL   +   + R LP+C H FHVECID W  + STCPLCR
Sbjct: 122 CAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCR 164


>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
           SV=1
          Length = 236

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 31/46 (67%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEV 57
           C+VCL      +K +++P C H FH+ECID W  S +TCPLCR+ +
Sbjct: 111 CSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSL 156


>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
           PE=2 SV=1
          Length = 349

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 2/47 (4%)

Query: 9   YCYCTVCLDGISDGQKFRRLPECKHCFHVECIDAWF-QSRSTCPLCR 54
           Y  C +CLD   DG K R LP C H +H  C+D W  Q+R TCP+C+
Sbjct: 227 YDVCAICLDEYEDGDKLRILP-CAHAYHSRCVDPWLTQTRKTCPICK 272


>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
           PE=1 SV=1
          Length = 301

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 30/49 (61%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEVAIV 60
           C+VCL+   + +  R LP+C H FH+ CID W  S   CPLCR  V ++
Sbjct: 135 CSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLI 183


>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
           PE=1 SV=1
          Length = 225

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 31/46 (67%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCRIEV 57
           C+VCL      +K +++P C H FH+ECID W  S +TCPLCR+ +
Sbjct: 97  CSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSL 142


>sp|Q9LZV8|ATL74_ARATH RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2
           SV=1
          Length = 159

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 3/52 (5%)

Query: 12  CTVCLDGISDGQKFRRLPECKHCFHVECIDAWFQSRSTCPLCR---IEVAIV 60
           C +CL   +DG++ R LP C H FH+ CID W  S S+CP CR   IEV + 
Sbjct: 105 CAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLIEVHVA 156


>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
           SV=1
          Length = 381

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 9   YCYCTVCLDGISDGQKFRRLPECKHCFHVECIDAWF-QSRSTCPLCRIEV 57
           Y  C +CLD   DG K R LP C H +H +C+D W  +++ TCP+C+ +V
Sbjct: 237 YDVCAICLDEYEDGDKLRILP-CSHAYHCKCVDPWLTKTKKTCPVCKQKV 285


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.332    0.141    0.506 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,311,468
Number of Sequences: 539616
Number of extensions: 936688
Number of successful extensions: 3302
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 208
Number of HSP's that attempted gapping in prelim test: 2816
Number of HSP's gapped (non-prelim): 594
length of query: 86
length of database: 191,569,459
effective HSP length: 56
effective length of query: 30
effective length of database: 161,350,963
effective search space: 4840528890
effective search space used: 4840528890
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 55 (25.8 bits)