BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036507
(639 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/311 (37%), Positives = 169/311 (54%), Gaps = 34/311 (10%)
Query: 341 FTYDEILFATEGFSDSSL------LGHGTYGSVYYGNIRNQEVAIKRMTA-------TKT 387
F++ E+ T F + + +G G +G VY G + N VA+K++ A
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 388 KEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSW 447
++F E+K++ K H NLVEL+G+++ D+L L+Y Y GSL L G LSW
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSW 132
Query: 448 IMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDG 507
MR +IA AA G+ ++HE+ H++HRDIKS+NILLD AF AKISDFGLA+ K +
Sbjct: 133 HMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ- 188
Query: 508 EATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQER 567
+++VGT Y+APE L G T KSD+Y+FGVVL EII+G A V +++E
Sbjct: 189 TVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPA-------VDEHREP 240
Query: 568 RSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPD 627
+ L +++DYID M D + M +A QC+ E RPD
Sbjct: 241 QLLLDIKEEI------EDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPD 293
Query: 628 MKQVVISLSQI 638
+K+V L ++
Sbjct: 294 IKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 165/304 (54%), Gaps = 34/304 (11%)
Query: 341 FTYDEILFATEGFSDSSL------LGHGTYGSVYYGNIRNQEVAIKRMTA-------TKT 387
F++ E+ T F + + +G G +G VY G + N VA+K++ A
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 388 KEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSW 447
++F E+K++ K H NLVEL+G+++ D+L L+Y Y GSL L G LSW
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSW 132
Query: 448 IMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDG 507
MR +IA AA G+ ++HE+ H++HRDIKS+NILLD AF AKISDFGLA+ K +
Sbjct: 133 HMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ- 188
Query: 508 EATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQER 567
++VGT Y+APE L G T KSD+Y+FGVVL EII+G A V +++E
Sbjct: 189 TVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPA-------VDEHREP 240
Query: 568 RSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPD 627
+ L +++DYID M D + M +A QC+ E RPD
Sbjct: 241 QLLLDIKEEI------EDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPD 293
Query: 628 MKQV 631
+K+V
Sbjct: 294 IKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 116/311 (37%), Positives = 168/311 (54%), Gaps = 34/311 (10%)
Query: 341 FTYDEILFATEGFSDSSL------LGHGTYGSVYYGNIRNQEVAIKRMTA-------TKT 387
F++ E+ T F + + +G G +G VY G + N VA+K++ A
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 388 KEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSW 447
++F E+K++ K H NLVEL+G+++ D+L L+Y Y GSL L G LSW
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSW 126
Query: 448 IMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDG 507
MR +IA AA G+ ++HE+ H++HRDIKS+NILLD AF AKISDFGLA+ K +
Sbjct: 127 HMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ- 182
Query: 508 EATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQER 567
++VGT Y+APE L G T KSD+Y+FGVVL EII+G A V +++E
Sbjct: 183 XVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPA-------VDEHREP 234
Query: 568 RSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPD 627
+ L +++DYID M D + M +A QC+ E RPD
Sbjct: 235 QLLLDIKEEI------EDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPD 287
Query: 628 MKQVVISLSQI 638
+K+V L ++
Sbjct: 288 IKKVQQLLQEM 298
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/310 (33%), Positives = 162/310 (52%), Gaps = 36/310 (11%)
Query: 341 FTYDEILFATEGFSDSSLLGHGTYGSVYYGNIRNQE-VAIKRMTATKTK----EFMAEMK 395
F+ E+ A++ FS+ ++LG G +G VY G + + VA+KR+ + + +F E++
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIAL 455
++ H NL+ L G+ T E L+Y Y GS+ S L + + Q L W R +IAL
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE-RPESQPPLDWPKRQRIAL 146
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
+ARGL Y+H+H +HRD+K++NILLD F A + DFGLAKL+ V
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD--XHVXXAVR 204
Query: 516 GTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFML 575
GT G++APEYL+ G ++ K+DV+ +GV+L E+I+G+ A F L
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRA-------------------FDL 245
Query: 576 AALRNSPDSMSM---------SSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRP 626
A L N D M + L+ +D ++ Y + + ++ +A C P+ RP
Sbjct: 246 ARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERP 305
Query: 627 DMKQVVISLS 636
M +VV L
Sbjct: 306 KMSEVVRMLE 315
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 161/296 (54%), Gaps = 23/296 (7%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRN-QEVAIKRMTATKTK---EFMAEMKILCKVHHSN 404
AT F L+GHG +G VY G +R+ +VA+KR T ++ EF E++ L H +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
LV LIG+ +E+ LIY+Y + G+LK HL+ + S+SW R++I + AARGL Y+
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYG-SDLPTMSMSWEQRLEICIGAARGLHYL 155
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV-GTFGYLAP 523
H +HRD+KS NILLD F KI+DFG++K T G+ + VV GT GY+ P
Sbjct: 156 HTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKGTLGYIDP 210
Query: 524 EYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPD 583
EY G T KSDVY+FGVVLFE++ + AI+ +SL M+ + +
Sbjct: 211 EYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV------------QSLPREMVNLAEWAVE 258
Query: 584 SMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQIL 639
S + L+ +DPN+ D + L K A +C+ RP M V+ L L
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/295 (37%), Positives = 160/295 (54%), Gaps = 21/295 (7%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRN-QEVAIKRMTATKTK---EFMAEMKILCKVHHSN 404
AT F L+GHG +G VY G +R+ +VA+KR T ++ EF E++ L H +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
LV LIG+ +E+ LIY+Y + G+LK HL+ + S+SW R++I + AARGL Y+
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYG-SDLPTMSMSWEQRLEICIGAARGLHYL 155
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
H +HRD+KS NILLD F KI+DFG++K G D V GT GY+ PE
Sbjct: 156 HTRA---IIHRDVKSINILLDENFVPKITDFGISK-KGTELDQTHLXXVVKGTLGYIDPE 211
Query: 525 YLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDS 584
Y G T KSDVY+FGVVLFE++ + AI++ S +E +LA + + + N
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQ-----SLPREMVNLAEWAVESHNN---- 262
Query: 585 MSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQIL 639
L+ +DPN+ D + L K A +C+ RP M V+ L L
Sbjct: 263 ---GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 161/310 (51%), Gaps = 36/310 (11%)
Query: 341 FTYDEILFATEGFSDSSLLGHGTYGSVYYGNIRNQE-VAIKRMTATKTK----EFMAEMK 395
F+ E+ A++ F + ++LG G +G VY G + + VA+KR+ +T+ +F E++
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIAL 455
++ H NL+ L G+ T E L+Y Y GS+ S L + + Q L W R +IAL
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE-RPESQPPLDWPKRQRIAL 138
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
+ARGL Y+H+H +HRD+K++NILLD F A + DFGLAKL+ V
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD--XHVXXAVR 196
Query: 516 GTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFML 575
G G++APEYL+ G ++ K+DV+ +GV+L E+I+G+ A F L
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRA-------------------FDL 237
Query: 576 AALRNSPDSMSM---------SSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRP 626
A L N D M + L+ +D ++ Y + + ++ +A C P+ RP
Sbjct: 238 ARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERP 297
Query: 627 DMKQVVISLS 636
M +VV L
Sbjct: 298 KMSEVVRMLE 307
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 160/304 (52%), Gaps = 34/304 (11%)
Query: 341 FTYDEILFATEGFSDSSL------LGHGTYGSVYYGNIRNQEVAIKRMTA-------TKT 387
F++ E+ T F + + G G +G VY G + N VA+K++ A
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 388 KEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSW 447
++F E+K+ K H NLVEL+G+++ D+L L+Y Y GSL L G LSW
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLD--GTPPLSW 123
Query: 448 IMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDG 507
R +IA AA G+ ++HE+ H++HRDIKS+NILLD AF AKISDFGLA+ K +
Sbjct: 124 HXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ- 179
Query: 508 EATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQER 567
+++VGT Y APE L G T KSD+Y+FGVVL EII+G A V +++E
Sbjct: 180 XVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPA-------VDEHREP 231
Query: 568 RSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPD 627
+ L +++DYID D + +A QC+ E RPD
Sbjct: 232 QLLLDIKEEI------EDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNKRPD 284
Query: 628 MKQV 631
+K+V
Sbjct: 285 IKKV 288
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 107/196 (54%), Gaps = 11/196 (5%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G++G+V+ +VA+K + A + EF+ E+ I+ ++ H N+V +G
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 414 TEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
L ++ EY +GSL LH R Q L R+ +A D A+G+ Y+H V
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDVAKGMNYLHNRNPP-IV 161
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATA 533
HR++KS N+L+D + K+ DFGL++L T + GT ++APE L D +
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF---LSSKSAAGTPEWMAPEVLRDEPSNE 218
Query: 534 KSDVYAFGVVLFEIIS 549
KSDVY+FGV+L+E+ +
Sbjct: 219 KSDVYSFGVILWELAT 234
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 106/196 (54%), Gaps = 11/196 (5%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G++G+V+ +VA+K + A + EF+ E+ I+ ++ H N+V +G
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 414 TEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
L ++ EY +GSL LH R Q L R+ +A D A+G+ Y+H V
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDVAKGMNYLHNRNPP-IV 161
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATA 533
HRD+KS N+L+D + K+ DFGL++L + GT ++APE L D +
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRL---KASXFLXSKXAAGTPEWMAPEVLRDEPSNE 218
Query: 534 KSDVYAFGVVLFEIIS 549
KSDVY+FGV+L+E+ +
Sbjct: 219 KSDVYSFGVILWELAT 234
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 145/305 (47%), Gaps = 60/305 (19%)
Query: 358 LLGHGTYGSVYYGNIRNQ----EVAIKRMTATKTKE----FMAEMKILCKV-HHSNLVEL 408
++G G +G V I+ + AIKRM +K+ F E+++LCK+ HH N++ L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH-------DPQ----NRGQTSLSWIMRVQIALDA 457
+G L+L EYA G+L L DP N ++LS + A D
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 458 ARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT 517
ARG++Y+ ++ ++HRD+ + NIL+ + AKI+DFGL++ E V K +G
Sbjct: 152 ARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR------GQEVYVKKTMGR 202
Query: 518 F--GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFML 575
++A E L + T SDV+++GV+L+EI+S
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS-------------------------- 236
Query: 576 AALRNSPD-SMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVIS 634
L +P M+ + L + + P +C ++ L +QC E P RP Q+++S
Sbjct: 237 --LGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 294
Query: 635 LSQIL 639
L+++L
Sbjct: 295 LNRML 299
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 145/305 (47%), Gaps = 60/305 (19%)
Query: 358 LLGHGTYGSVYYGNIRNQ----EVAIKRMTATKTKE----FMAEMKILCKV-HHSNLVEL 408
++G G +G V I+ + AIKRM +K+ F E+++LCK+ HH N++ L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH-------DPQ----NRGQTSLSWIMRVQIALDA 457
+G L+L EYA G+L L DP N ++LS + A D
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 458 ARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT 517
ARG++Y+ ++ ++HRD+ + NIL+ + AKI+DFGL++ E V K +G
Sbjct: 142 ARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR------GQEVYVKKTMGR 192
Query: 518 F--GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFML 575
++A E L + T SDV+++GV+L+EI+S
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS-------------------------- 226
Query: 576 AALRNSPD-SMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVIS 634
L +P M+ + L + + P +C ++ L +QC E P RP Q+++S
Sbjct: 227 --LGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 284
Query: 635 LSQIL 639
L+++L
Sbjct: 285 LNRML 289
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 109/193 (56%), Gaps = 14/193 (7%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTATKTKE-FMAEMKILCKVHHSNLVELIGYAATEDE 417
+G G +G V G+ R +VA+K + T + F+AE ++ ++ HSNLV+L+G E
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 79
Query: 418 -LFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRD 476
L+++ EY KGSL +L ++RG++ L ++ +LD +EY+ ++VHRD
Sbjct: 80 GLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 133
Query: 477 IKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSD 536
+ + N+L+ AK+SDFGL K T D K + APE L + + KSD
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREAAFSTKSD 187
Query: 537 VYAFGVVLFEIIS 549
V++FG++L+EI S
Sbjct: 188 VWSFGILLWEIYS 200
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 109/193 (56%), Gaps = 14/193 (7%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTATKTKE-FMAEMKILCKVHHSNLVELIGYAATEDE 417
+G G +G V G+ R +VA+K + T + F+AE ++ ++ HSNLV+L+G E
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 88
Query: 418 -LFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRD 476
L+++ EY KGSL +L ++RG++ L ++ +LD +EY+ ++VHRD
Sbjct: 89 GLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 142
Query: 477 IKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSD 536
+ + N+L+ AK+SDFGL K T D K + APE L + + KSD
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSD 196
Query: 537 VYAFGVVLFEIIS 549
V++FG++L+EI S
Sbjct: 197 VWSFGILLWEIYS 209
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 145/305 (47%), Gaps = 60/305 (19%)
Query: 358 LLGHGTYGSVYYGNIRNQ----EVAIKRMTATKTKE----FMAEMKILCKV-HHSNLVEL 408
++G G +G V I+ + AIKRM +K+ F E+++LCK+ HH N++ L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH-------DPQ----NRGQTSLSWIMRVQIALDA 457
+G L+L EYA G+L L DP N ++LS + A D
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 458 ARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT 517
ARG++Y+ ++ ++HR++ + NIL+ + AKI+DFGL++ E V K +G
Sbjct: 149 ARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR------GQEVYVKKTMGR 199
Query: 518 F--GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFML 575
++A E L + T SDV+++GV+L+EI+S
Sbjct: 200 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS-------------------------- 233
Query: 576 AALRNSPD-SMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVIS 634
L +P M+ + L + + P +C ++ L +QC E P RP Q+++S
Sbjct: 234 --LGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 291
Query: 635 LSQIL 639
L+++L
Sbjct: 292 LNRML 296
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 109/193 (56%), Gaps = 14/193 (7%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTATKTKE-FMAEMKILCKVHHSNLVELIGYAATEDE 417
+G G +G V G+ R +VA+K + T + F+AE ++ ++ HSNLV+L+G E
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 73
Query: 418 -LFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRD 476
L+++ EY KGSL +L ++RG++ L ++ +LD +EY+ ++VHRD
Sbjct: 74 GLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 127
Query: 477 IKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSD 536
+ + N+L+ AK+SDFGL K T D K + APE L + + KSD
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSD 181
Query: 537 VYAFGVVLFEIIS 549
V++FG++L+EI S
Sbjct: 182 VWSFGILLWEIYS 194
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 109/193 (56%), Gaps = 14/193 (7%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTATKTKE-FMAEMKILCKVHHSNLVELIGYAATEDE 417
+G G +G V G+ R +VA+K + T + F+AE ++ ++ HSNLV+L+G E
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 260
Query: 418 -LFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRD 476
L+++ EY KGSL +L ++RG++ L ++ +LD +EY+ ++VHRD
Sbjct: 261 GLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 314
Query: 477 IKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSD 536
+ + N+L+ AK+SDFGL K T D K + APE L + + KSD
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSD 368
Query: 537 VYAFGVVLFEIIS 549
V++FG++L+EI S
Sbjct: 369 VWSFGILLWEIYS 381
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 142/288 (49%), Gaps = 41/288 (14%)
Query: 356 SSLLGHGTYGSVYYGNIRNQEVAIKRM-----TATKTKEFMAEMKILCKVHHSNLVELIG 410
S+ +G G++G+VY G +VA+K + T + + F E+ +L K H N++ +G
Sbjct: 41 STRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 411 YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
Y T+D L ++ ++ + SL HLH + + Q + IA A+G++Y+H
Sbjct: 100 YM-TKDNLAIVTQWCEGSSLYKHLHVQETKFQM----FQLIDIARQTAQGMDYLHA---K 151
Query: 471 HYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT--- 527
+ +HRD+KS+NI L KI DFGLA + + S G V + G+ ++APE +
Sbjct: 152 NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS-GSQQVEQPTGSVLWMAPEVIRMQD 210
Query: 528 DGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSM 587
+ + +SDVY++G+VL+E+++G+ + + R FM+
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTGE--------LPYSHINNRDQIIFMVG----------- 251
Query: 588 SSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISL 635
+ Y P++ LY +C M L CV + RP Q++ S+
Sbjct: 252 ---RGYASPDLSKLYK-NCPKAMKRLVADCVKKVKEERPLFPQILSSI 295
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 139/285 (48%), Gaps = 41/285 (14%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTAT-----KTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G++G+VY G +VA+K + T + + F E+ +L K H N++ +GY+
Sbjct: 21 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 78
Query: 414 TEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
T+ +L ++ ++ + SL HLH + T I + IA A+G++Y+H + +
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT---DGL 530
HRD+KS+NI L KI DFGLA + + S G ++ G+ ++APE +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-GSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 531 ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSL 590
+ +SDVYAFG+VL+E+++G+ + N R FM+ SPD + S
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ--------LPYSNINNRDQIIFMVGRGYLSPDLSKVRS- 241
Query: 591 KDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISL 635
+C M L +C+ + RP Q++ S+
Sbjct: 242 --------------NCPKAMKRLMAECLKKKRDERPLFPQILASI 272
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 139/285 (48%), Gaps = 41/285 (14%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTAT-----KTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G++G+VY G +VA+K + T + + F E+ +L K H N++ +GY+
Sbjct: 16 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 73
Query: 414 TEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
T+ +L ++ ++ + SL HLH + T I + IA A+G++Y+H + +
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT---DGL 530
HRD+KS+NI L KI DFGLA + + S G ++ G+ ++APE +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-GSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 531 ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSL 590
+ +SDVYAFG+VL+E+++G+ + N R FM+ SPD + S
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ--------LPYSNINNRDQIIFMVGRGYLSPDLSKVRS- 236
Query: 591 KDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISL 635
+C M L +C+ + RP Q++ S+
Sbjct: 237 --------------NCPKAMKRLMAECLKKKRDERPLFPQILASI 267
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 139/285 (48%), Gaps = 41/285 (14%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTAT-----KTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G++G+VY G +VA+K + T + + F E+ +L K H N++ +GY+
Sbjct: 21 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 78
Query: 414 TEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
T+ +L ++ ++ + SL HLH + T I + IA A+G++Y+H + +
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT---DGL 530
HRD+KS+NI L KI DFGLA + + S G ++ G+ ++APE +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-GSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 531 ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSL 590
+ +SDVYAFG+VL+E+++G+ + N R FM+ SPD + S
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ--------LPYSNINNRDQIIFMVGRGYLSPDLSKVRS- 241
Query: 591 KDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISL 635
+C M L +C+ + RP Q++ S+
Sbjct: 242 --------------NCPKAMKRLMAECLKKKRDERPLFPQILASI 272
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 139/285 (48%), Gaps = 41/285 (14%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTAT-----KTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G++G+VY G +VA+K + T + + F E+ +L K H N++ +GY+
Sbjct: 18 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 75
Query: 414 TEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
T+ +L ++ ++ + SL HLH + T I + IA A+G++Y+H + +
Sbjct: 76 TKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS---II 128
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT---DGL 530
HRD+KS+NI L KI DFGLA + + S G ++ G+ ++APE +
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-GSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 531 ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSL 590
+ +SDVYAFG+VL+E+++G+ + N R FM+ SPD + S
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQ--------LPYSNINNRDQIIFMVGRGYLSPDLSKVRS- 238
Query: 591 KDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISL 635
+C M L +C+ + RP Q++ S+
Sbjct: 239 --------------NCPKAMKRLMAECLKKKRDERPLFPQILASI 269
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 139/285 (48%), Gaps = 41/285 (14%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTAT-----KTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G++G+VY G +VA+K + T + + F E+ +L K H N++ +GY+
Sbjct: 44 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 101
Query: 414 TEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
T+ +L ++ ++ + SL HLH + T I + IA A+G++Y+H + +
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT---DGL 530
HRD+KS+NI L KI DFGLA + + S G ++ G+ ++APE +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-GSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 531 ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSL 590
+ +SDVYAFG+VL+E+++G+ + N R FM+ SPD + S
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ--------LPYSNINNRDQIIFMVGRGYLSPDLSKVRS- 264
Query: 591 KDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISL 635
+C M L +C+ + RP Q++ S+
Sbjct: 265 --------------NCPKAMKRLMAECLKKKRDERPLFPQILASI 295
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 139/285 (48%), Gaps = 41/285 (14%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTAT-----KTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G++G+VY G +VA+K + T + + F E+ +L K H N++ +GY+
Sbjct: 43 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 100
Query: 414 TEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
T+ +L ++ ++ + SL HLH + T I + IA A+G++Y+H + +
Sbjct: 101 TKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS---II 153
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT---DGL 530
HRD+KS+NI L KI DFGLA + + S G ++ G+ ++APE +
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-GSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 531 ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSL 590
+ +SDVYAFG+VL+E+++G+ + N R FM+ SPD + S
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQ--------LPYSNINNRDQIIFMVGRGYLSPDLSKVRS- 263
Query: 591 KDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISL 635
+C M L +C+ + RP Q++ S+
Sbjct: 264 --------------NCPKAMKRLMAECLKKKRDERPLFPQILASI 294
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 138/285 (48%), Gaps = 41/285 (14%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTAT-----KTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G++G+VY G +VA+K + T + + F E+ +L K H N++ +GY+
Sbjct: 16 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 73
Query: 414 TEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
T +L ++ ++ + SL HLH + T I + IA A+G++Y+H + +
Sbjct: 74 TAPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT---DGL 530
HRD+KS+NI L KI DFGLA + + S G ++ G+ ++APE +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-GSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 531 ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSL 590
+ +SDVYAFG+VL+E+++G+ + N R FM+ SPD + S
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ--------LPYSNINNRDQIIFMVGRGYLSPDLSKVRS- 236
Query: 591 KDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISL 635
+C M L +C+ + RP Q++ S+
Sbjct: 237 --------------NCPKAMKRLMAECLKKKRDERPLFPQILASI 267
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 138/285 (48%), Gaps = 41/285 (14%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTAT-----KTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G++G+VY G +VA+K + T + + F E+ +L K H N++ +GY+
Sbjct: 16 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 73
Query: 414 TEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
T+ +L ++ ++ + SL HLH + T I + IA A+G++Y+H + +
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT---DGL 530
HRD+KS+NI L KI DFGLA + S G ++ G+ ++APE +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-GSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 531 ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSL 590
+ +SDVYAFG+VL+E+++G+ + N R FM+ SPD + S
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ--------LPYSNINNRDQIIFMVGRGYLSPDLSKVRS- 236
Query: 591 KDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISL 635
+C M L +C+ + RP Q++ S+
Sbjct: 237 --------------NCPKAMKRLMAECLKKKRDERPLFPQILASI 267
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 138/285 (48%), Gaps = 41/285 (14%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTAT-----KTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G++G+VY G +VA+K + T + + F E+ +L K H N++ +GY+
Sbjct: 44 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 101
Query: 414 TEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
T+ +L ++ ++ + SL HLH + T I + IA A+G++Y+H + +
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT---DGL 530
HRD+KS+NI L KI DFGLA + S G ++ G+ ++APE +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-GSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 531 ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSL 590
+ +SDVYAFG+VL+E+++G+ + N R FM+ SPD + S
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ--------LPYSNINNRDQIIFMVGRGYLSPDLSKVRS- 264
Query: 591 KDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISL 635
+C M L +C+ + RP Q++ S+
Sbjct: 265 --------------NCPKAMKRLMAECLKKKRDERPLFPQILASI 295
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 111/195 (56%), Gaps = 14/195 (7%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG+G +G V+ G N +VAIK + T + E F+ E +I+ K+ H LV+L +E
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYA-VVSE 75
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ ++++ EY KGSL L D + R +L V +A A G+ YI + +Y+HR
Sbjct: 76 EPIYIVTEYMNKGSLLDFLKDGEGR---ALKLPNLVDMAAQVAAGMAYIE---RMNYIHR 129
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLATAK 534
D++S+NIL+ + KI+DFGLA+L+ D E T + + APE G T K
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 535 SDVYAFGVVLFEIIS 549
SDV++FG++L E+++
Sbjct: 187 SDVWSFGILLTELVT 201
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 138/285 (48%), Gaps = 41/285 (14%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTAT-----KTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G++G+VY G +VA+K + T + + F E+ +L K H N++ +GY+
Sbjct: 36 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 93
Query: 414 TEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
T+ +L ++ ++ + SL HLH + T I + IA A+G++Y+H + +
Sbjct: 94 TKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS---II 146
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT---DGL 530
HRD+KS+NI L KI DFGLA + S G ++ G+ ++APE +
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-GSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 531 ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSL 590
+ +SDVYAFG+VL+E+++G+ + N R FM+ SPD + S
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQ--------LPYSNINNRDQIIFMVGRGYLSPDLSKVRS- 256
Query: 591 KDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISL 635
+C M L +C+ + RP Q++ S+
Sbjct: 257 --------------NCPKAMKRLMAECLKKKRDERPLFPQILASI 287
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 146/321 (45%), Gaps = 37/321 (11%)
Query: 329 GTDVFDMEKPVVFTYDEILFATEGFSDSSLLGHGTYGSV---YYGNIRN---QEVAIKRM 382
G F+ P F + F + LG G +GSV Y +++ + VA+K++
Sbjct: 1 GAMAFEDRDPTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL 53
Query: 383 ---TATKTKEFMAEMKILCKVHHSNLVELIG--YAATEDELFLIYEYAQKGSLKSHLHDP 437
T ++F E++IL + H N+V+ G Y+A L LI EY GSL+ +L
Sbjct: 54 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 113
Query: 438 QNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGL 497
+ R + I +Q +G+EY+ Y+HRD+ + NIL+++ R KI DFGL
Sbjct: 114 KER----IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGL 166
Query: 498 AKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRT 557
K++ + + + APE LT+ + SDV++FGVVL+E+ + E
Sbjct: 167 TKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE----- 221
Query: 558 EGMVSKNQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQC 617
+ + A FM + M + L + + N P C ++ M+ +C
Sbjct: 222 -------KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 274
Query: 618 VDEDPILRPDMKQVVISLSQI 638
+ + RP + + + + QI
Sbjct: 275 WNNNVNQRPSFRDLALRVDQI 295
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 149/323 (46%), Gaps = 38/323 (11%)
Query: 327 ALGTDVFDMEKPVVFTYDEILFATEGFSDSSLLGHGTYGSV---YYGNIRN---QEVAIK 380
A+G+ F+ P F + F + LG G +GSV Y +++ + VA+K
Sbjct: 25 AMGS-AFEDRDPTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVK 76
Query: 381 RM---TATKTKEFMAEMKILCKVHHSNLVELIG--YAATEDELFLIYEYAQKGSLKSHLH 435
++ T ++F E++IL + H N+V+ G Y+A L LI EY GSL+ +L
Sbjct: 77 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ 136
Query: 436 DPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDF 495
+ R + I +Q +G+EY+ Y+HRD+ + NIL+++ R KI DF
Sbjct: 137 KHKER----IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDF 189
Query: 496 GLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAII 555
GL K++ + + + APE LT+ + SDV++FGVVL+E+ + E
Sbjct: 190 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE--- 246
Query: 556 RTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAK 615
+ + A FM + M + L + + N P C ++ M+
Sbjct: 247 ---------KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMT 297
Query: 616 QCVDEDPILRPDMKQVVISLSQI 638
+C + + RP + + + + QI
Sbjct: 298 ECWNNNVNQRPSFRDLALRVDQI 320
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 139/288 (48%), Gaps = 41/288 (14%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTAT-----KTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G++G+VY G +VA+K + T + + F E+ +L K H N++ +GY+
Sbjct: 20 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 77
Query: 414 TEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
T+ +L ++ ++ + SL HLH +T + IA ARG++Y+H + +
Sbjct: 78 TKPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLHAKS---II 130
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT---DGL 530
HRD+KS+NI L KI DFGLA + + S G ++ G+ ++APE +
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWS-GSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 531 ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSL 590
+ +SDVYAFG+VL+E+++G+ + N R M+ SPD + S
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQ--------LPYSNINNRDQIIEMVGRGSLSPDLSKVRS- 240
Query: 591 KDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
+C +M L +C+ + RP +++ + ++
Sbjct: 241 --------------NCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 145/317 (45%), Gaps = 37/317 (11%)
Query: 333 FDMEKPVVFTYDEILFATEGFSDSSLLGHGTYGSV---YYGNIRN---QEVAIKRM---T 383
F+ P F + F + LG G +GSV Y +++ + VA+K++ T
Sbjct: 6 FEDRDPTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST 58
Query: 384 ATKTKEFMAEMKILCKVHHSNLVELIG--YAATEDELFLIYEYAQKGSLKSHLHDPQNRG 441
++F E++IL + H N+V+ G Y+A L LI EY GSL+ +L + R
Sbjct: 59 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER- 117
Query: 442 QTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLV 501
+ I +Q +G+EY+ Y+HRD+ + NIL+++ R KI DFGL K++
Sbjct: 118 ---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 171
Query: 502 GKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMV 561
+ + + APE LT+ + SDV++FGVVL+E+ + E
Sbjct: 172 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE--------- 222
Query: 562 SKNQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDED 621
+ + A FM + M + L + + N P C ++ M+ +C + +
Sbjct: 223 ---KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 279
Query: 622 PILRPDMKQVVISLSQI 638
RP + + + + QI
Sbjct: 280 VNQRPSFRDLALRVDQI 296
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 144/315 (45%), Gaps = 37/315 (11%)
Query: 335 MEKPVVFTYDEILFATEGFSDSSLLGHGTYGSV---YYGNIRN---QEVAIKRM---TAT 385
M P F + F + LG G +GSV Y +++ + VA+K++ T
Sbjct: 1 MRDPTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE 53
Query: 386 KTKEFMAEMKILCKVHHSNLVELIG--YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQT 443
++F E++IL + H N+V+ G Y+A L LI EY GSL+ +L + R
Sbjct: 54 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--- 110
Query: 444 SLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK 503
+ I +Q +G+EY+ Y+HRD+ + NIL+++ R KI DFGL K++ +
Sbjct: 111 -IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSK 563
+ + APE LT+ + SDV++FGVVL+E+ + E
Sbjct: 167 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE----------- 215
Query: 564 NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPI 623
+ + A FM + M + L + + N P C ++ M+ +C + +
Sbjct: 216 -KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVN 274
Query: 624 LRPDMKQVVISLSQI 638
RP + + + + QI
Sbjct: 275 QRPSFRDLALRVDQI 289
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 30/291 (10%)
Query: 359 LGHGTYGSV---YYGNIRN---QEVAIKRM---TATKTKEFMAEMKILCKVHHSNLVELI 409
LG G +GSV Y +++ + VA+K++ T ++F E++IL + H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 410 G--YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
G Y+A L LI EY GSL+ +L + R + I +Q +G+EY+
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL--- 133
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
Y+HRD+ + NIL+++ R KI DFGL K++ + + + APE LT
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 528 DGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSM 587
+ + SDV++FGVVL+E+ + E + + A FM + M +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFTYIE------------KSKSPPAEFMRMIGNDKQGQMIV 241
Query: 588 SSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
L + + N P C ++ M+ +C + + RP + + + + QI
Sbjct: 242 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 138/290 (47%), Gaps = 46/290 (15%)
Query: 356 SSLLGHGTYGSVYYGNIRNQEVAIKRM-TATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
++G G +G V R ++VAIK++ + ++ K F+ E++ L +V+H N+V+L Y A
Sbjct: 14 EEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKL--YGAC 71
Query: 415 EDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
+ + L+ EYA+ GSL + LH P ++SW L ++G+ Y+H
Sbjct: 72 LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPK 125
Query: 471 HYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDG 529
+HRD+K N+LL + KI DFG A D + +T G+ ++APE
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTA------CDIQTHMTNNKGSAAWMAPEVFEGS 179
Query: 530 LATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSS 589
+ K DV+++G++L+E+I+ ++ G P M +
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKPFDEIGG----------------------PAFRIMWA 217
Query: 590 LKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQIL 639
+ + P ++ P + L +C +DP RP M+++V ++ ++
Sbjct: 218 VHNGTRPPLIKNLPK----PIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 263
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 145/317 (45%), Gaps = 37/317 (11%)
Query: 333 FDMEKPVVFTYDEILFATEGFSDSSLLGHGTYGSV---YYGNIRN---QEVAIKRM---T 383
F+ P F + F + LG G +GSV Y +++ + VA+K++ T
Sbjct: 3 FEDRDPTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST 55
Query: 384 ATKTKEFMAEMKILCKVHHSNLVELIG--YAATEDELFLIYEYAQKGSLKSHLHDPQNRG 441
++F E++IL + H N+V+ G Y+A L LI EY GSL+ +L + R
Sbjct: 56 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER- 114
Query: 442 QTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLV 501
+ I +Q +G+EY+ Y+HRD+ + NIL+++ R KI DFGL K++
Sbjct: 115 ---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 168
Query: 502 GKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMV 561
+ + + APE LT+ + SDV++FGVVL+E+ + E
Sbjct: 169 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE--------- 219
Query: 562 SKNQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDED 621
+ + A FM + M + L + + N P C ++ M+ +C + +
Sbjct: 220 ---KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 276
Query: 622 PILRPDMKQVVISLSQI 638
RP + + + + QI
Sbjct: 277 VNQRPSFRDLALRVDQI 293
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 145/317 (45%), Gaps = 37/317 (11%)
Query: 333 FDMEKPVVFTYDEILFATEGFSDSSLLGHGTYGSV---YYGNIRN---QEVAIKRM---T 383
F+ P F + F + LG G +GSV Y +++ + VA+K++ T
Sbjct: 4 FEDRDPTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST 56
Query: 384 ATKTKEFMAEMKILCKVHHSNLVELIG--YAATEDELFLIYEYAQKGSLKSHLHDPQNRG 441
++F E++IL + H N+V+ G Y+A L LI EY GSL+ +L + R
Sbjct: 57 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER- 115
Query: 442 QTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLV 501
+ I +Q +G+EY+ Y+HRD+ + NIL+++ R KI DFGL K++
Sbjct: 116 ---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 169
Query: 502 GKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMV 561
+ + + APE LT+ + SDV++FGVVL+E+ + E
Sbjct: 170 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE--------- 220
Query: 562 SKNQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDED 621
+ + A FM + M + L + + N P C ++ M+ +C + +
Sbjct: 221 ---KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 277
Query: 622 PILRPDMKQVVISLSQI 638
RP + + + + QI
Sbjct: 278 VNQRPSFRDLALRVDQI 294
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 138/290 (47%), Gaps = 46/290 (15%)
Query: 356 SSLLGHGTYGSVYYGNIRNQEVAIKRM-TATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
++G G +G V R ++VAIK++ + ++ K F+ E++ L +V+H N+V+L Y A
Sbjct: 13 EEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKL--YGAC 70
Query: 415 EDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
+ + L+ EYA+ GSL + LH P ++SW L ++G+ Y+H
Sbjct: 71 LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPK 124
Query: 471 HYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDG 529
+HRD+K N+LL + KI DFG A D + +T G+ ++APE
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTA------CDIQTHMTNNKGSAAWMAPEVFEGS 178
Query: 530 LATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSS 589
+ K DV+++G++L+E+I+ ++ G P M +
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKPFDEIGG----------------------PAFRIMWA 216
Query: 590 LKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQIL 639
+ + P ++ P + L +C +DP RP M+++V ++ ++
Sbjct: 217 VHNGTRPPLIKNLPK----PIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 30/291 (10%)
Query: 359 LGHGTYGSV---YYGNIRN---QEVAIKRM---TATKTKEFMAEMKILCKVHHSNLVELI 409
LG G +GSV Y +++ + VA+K++ T ++F E++IL + H N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 410 G--YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
G Y+A L LI EY GSL+ +L + R + I +Q +G+EY+
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL--- 148
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
Y+HRD+ + NIL+++ R KI DFGL K++ + + + APE LT
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 528 DGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSM 587
+ + SDV++FGVVL+E+ + E + + A FM + M +
Sbjct: 209 ESKFSVASDVWSFGVVLYELFTYIE------------KSKSPPAEFMRMIGNDKQGQMIV 256
Query: 588 SSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
L + + N P C ++ M+ +C + + RP + + + + QI
Sbjct: 257 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 30/291 (10%)
Query: 359 LGHGTYGSV---YYGNIRN---QEVAIKRM---TATKTKEFMAEMKILCKVHHSNLVELI 409
LG G +GSV Y +++ + VA+K++ T ++F E++IL + H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 410 G--YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
G Y+A L LI EY GSL+ +L + R + I +Q +G+EY+
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL--- 130
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
Y+HRD+ + NIL+++ R KI DFGL K++ + + + APE LT
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 528 DGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSM 587
+ + SDV++FGVVL+E+ + E + + A FM + M +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFTYIE------------KSKSPPAEFMRMIGNDKQGQMIV 238
Query: 588 SSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
L + + N P C ++ M+ +C + + RP + + + + QI
Sbjct: 239 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 30/291 (10%)
Query: 359 LGHGTYGSV---YYGNIRN---QEVAIKRM---TATKTKEFMAEMKILCKVHHSNLVELI 409
LG G +GSV Y +++ + VA+K++ T ++F E++IL + H N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 410 G--YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
G Y+A L LI EY GSL+ +L + R + I +Q +G+EY+
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL--- 148
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
Y+HRD+ + NIL+++ R KI DFGL K++ + + + APE LT
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 528 DGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSM 587
+ + SDV++FGVVL+E+ + E + + A FM + M +
Sbjct: 209 ESKFSVASDVWSFGVVLYELFTYIE------------KSKSPPAEFMRMIGNDKQGQMIV 256
Query: 588 SSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
L + + N P C ++ M+ +C + + RP + + + + QI
Sbjct: 257 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 30/291 (10%)
Query: 359 LGHGTYGSV---YYGNIRN---QEVAIKRM---TATKTKEFMAEMKILCKVHHSNLVELI 409
LG G +GSV Y +++ + VA+K++ T ++F E++IL + H N+V+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 410 G--YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
G Y+A L LI EY GSL+ +L + R + I +Q +G+EY+
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL--- 128
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
Y+HRD+ + NIL+++ R KI DFGL K++ + + + APE LT
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 528 DGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSM 587
+ + SDV++FGVVL+E+ + E + + A FM + M +
Sbjct: 189 ESKFSVASDVWSFGVVLYELFTYIE------------KSKSPPAEFMRMIGNDKQGQMIV 236
Query: 588 SSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
L + + N P C ++ M+ +C + + RP + + + + QI
Sbjct: 237 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 287
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 111/210 (52%), Gaps = 26/210 (12%)
Query: 359 LGHGTYGSVYYGNIRNQ-------EVAIKRMTATKTKE----FMAEMKILCKVHHSNLVE 407
LGHG +G VY G + +VA+K + +++ F+ E I+ K++H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSLSWIMRVQIALDAARGLEYIH 465
IG + F++ E G LKS L + P+ +SL+ + + +A D A G +Y+
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 466 EHTKTHYVHRDIKSSNILL---DSAFRAKISDFGLAKLVGKTS---DGEATVTKVVGTFG 519
E+ H++HRDI + N LL AKI DFG+A+ + + S G + V
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 225
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++ PE +G+ T+K+D ++FGV+L+EI S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 111/210 (52%), Gaps = 26/210 (12%)
Query: 359 LGHGTYGSVYYGNIRNQ-------EVAIKRMTATKTKE----FMAEMKILCKVHHSNLVE 407
LGHG +G VY G + +VA+K + +++ F+ E I+ K++H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSLSWIMRVQIALDAARGLEYIH 465
IG + F++ E G LKS L + P+ +SL+ + + +A D A G +Y+
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 466 EHTKTHYVHRDIKSSNILL---DSAFRAKISDFGLAKLVGKTS---DGEATVTKVVGTFG 519
E+ H++HRDI + N LL AKI DFG+A+ + + S G + V
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 211
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++ PE +G+ T+K+D ++FGV+L+EI S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 30/291 (10%)
Query: 359 LGHGTYGSV---YYGNIRN---QEVAIKRM---TATKTKEFMAEMKILCKVHHSNLVELI 409
LG G +GSV Y +++ + VA+K++ T ++F E++IL + H N+V+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 410 G--YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
G Y+A L LI EY GSL+ +L + R + I +Q +G+EY+
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL--- 129
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
Y+HRD+ + NIL+++ R KI DFGL K++ + + + APE LT
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 528 DGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSM 587
+ + SDV++FGVVL+E+ + E + + A FM + M +
Sbjct: 190 ESKFSVASDVWSFGVVLYELFTYIE------------KSKSPPAEFMRMIGNDKQGQMIV 237
Query: 588 SSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
L + + N P C ++ M+ +C + + RP + + + + QI
Sbjct: 238 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 288
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 26/210 (12%)
Query: 359 LGHGTYGSVYYGNIRNQ-------EVAIKRMTATKTKE----FMAEMKILCKVHHSNLVE 407
LGHG +G VY G + +VA+K + +++ F+ E I+ K +H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSLSWIMRVQIALDAARGLEYIH 465
IG + F++ E G LKS L + P+ +SL+ + + +A D A G +Y+
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 466 EHTKTHYVHRDIKSSNILL---DSAFRAKISDFGLAKLVGKTS---DGEATVTKVVGTFG 519
E+ H++HRDI + N LL AKI DFG+A+ + + S G + V
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 210
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++ PE +G+ T+K+D ++FGV+L+EI S
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 26/210 (12%)
Query: 359 LGHGTYGSVYYGNIRNQ-------EVAIKRMTATKTKE----FMAEMKILCKVHHSNLVE 407
LGHG +G VY G + +VA+K + +++ F+ E I+ K +H N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSLSWIMRVQIALDAARGLEYIH 465
IG + F++ E G LKS L + P+ +SL+ + + +A D A G +Y+
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 466 EHTKTHYVHRDIKSSNILL---DSAFRAKISDFGLAKLVGKTS---DGEATVTKVVGTFG 519
E+ H++HRDI + N LL AKI DFG+A+ + + S G + V
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 202
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++ PE +G+ T+K+D ++FGV+L+EI S
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 26/210 (12%)
Query: 359 LGHGTYGSVYYGNIRNQ-------EVAIKRMTATKTKE----FMAEMKILCKVHHSNLVE 407
LGHG +G VY G + +VA+K + +++ F+ E I+ K +H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSLSWIMRVQIALDAARGLEYIH 465
IG + F++ E G LKS L + P+ +SL+ + + +A D A G +Y+
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 466 EHTKTHYVHRDIKSSNILL---DSAFRAKISDFGLAKLVGKTS---DGEATVTKVVGTFG 519
E+ H++HRDI + N LL AKI DFG+A+ + + S G + V
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 210
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++ PE +G+ T+K+D ++FGV+L+EI S
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 26/210 (12%)
Query: 359 LGHGTYGSVYYGNIRNQ-------EVAIKRMTATKTKE----FMAEMKILCKVHHSNLVE 407
LGHG +G VY G + +VA+K + +++ F+ E I+ K +H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSLSWIMRVQIALDAARGLEYIH 465
IG + F++ E G LKS L + P+ +SL+ + + +A D A G +Y+
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 466 EHTKTHYVHRDIKSSNILL---DSAFRAKISDFGLAKLVGKTS---DGEATVTKVVGTFG 519
E+ H++HRDI + N LL AKI DFG+A+ + + S G + V
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 225
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++ PE +G+ T+K+D ++FGV+L+EI S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 26/210 (12%)
Query: 359 LGHGTYGSVYYGNIRNQ-------EVAIKRMTATKTKE----FMAEMKILCKVHHSNLVE 407
LGHG +G VY G + +VA+K + +++ F+ E I+ K +H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSLSWIMRVQIALDAARGLEYIH 465
IG + F++ E G LKS L + P+ +SL+ + + +A D A G +Y+
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 466 EHTKTHYVHRDIKSSNILL---DSAFRAKISDFGLAKLVGKTS---DGEATVTKVVGTFG 519
E+ H++HRDI + N LL AKI DFG+A+ + + S G + V
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 225
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++ PE +G+ T+K+D ++FGV+L+EI S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 26/210 (12%)
Query: 359 LGHGTYGSVYYGNIRNQ-------EVAIKRMTATKTKE----FMAEMKILCKVHHSNLVE 407
LGHG +G VY G + +VA+K + +++ F+ E I+ K +H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSLSWIMRVQIALDAARGLEYIH 465
IG + F++ E G LKS L + P+ +SL+ + + +A D A G +Y+
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 466 EHTKTHYVHRDIKSSNILL---DSAFRAKISDFGLAKLVGKTS---DGEATVTKVVGTFG 519
E+ H++HRDI + N LL AKI DFG+A+ + + S G + V
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 211
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++ PE +G+ T+K+D ++FGV+L+EI S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 138/288 (47%), Gaps = 41/288 (14%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTAT-----KTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G++G+VY G +VA+K + T + + F E+ +L K H N++ +GY+
Sbjct: 32 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 89
Query: 414 TEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
T+ +L ++ ++ + SL HLH +T + IA ARG++Y+H + +
Sbjct: 90 TKPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT---DGL 530
HRD+KS+NI L KI DFGLA + S G ++ G+ ++APE +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-GSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 531 ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSL 590
+ +SDVYAFG+VL+E+++G+ + N R M+ SPD + S
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ--------LPYSNINNRDQIIEMVGRGSLSPDLSKVRS- 252
Query: 591 KDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
+C +M L +C+ + RP +++ + ++
Sbjct: 253 --------------NCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 26/210 (12%)
Query: 359 LGHGTYGSVYYGNIRNQ-------EVAIKRMTATKTKE----FMAEMKILCKVHHSNLVE 407
LGHG +G VY G + +VA+K + +++ F+ E I+ K +H N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSLSWIMRVQIALDAARGLEYIH 465
IG + F++ E G LKS L + P+ +SL+ + + +A D A G +Y+
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 466 EHTKTHYVHRDIKSSNILL---DSAFRAKISDFGLAKLVGKTS---DGEATVTKVVGTFG 519
E+ H++HRDI + N LL AKI DFG+A+ + + S G + V
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 227
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++ PE +G+ T+K+D ++FGV+L+EI S
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 141/294 (47%), Gaps = 36/294 (12%)
Query: 359 LGHGTYGSV---YYGNIRN---QEVAIKRM---TATKTKEFMAEMKILCKVHHSNLVELI 409
LG G +GSV Y +++ + VA+K++ T ++F E++IL + H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 410 G--YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
G Y+A L LI EY GSL+ +L + R + I +Q +G+EY+
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL--- 130
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT---FGYLAPE 524
Y+HRD+ + NIL+++ R KI DFGL K++ D E K G F Y APE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEFFKVKEPGESPIFWY-APE 187
Query: 525 YLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDS 584
LT+ + SDV++FGVVL+E+ + E + + A FM +
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFTYIE------------KSKSPPAEFMRMIGNDKQGQ 235
Query: 585 MSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
M + L + + N P C ++ M+ +C + + RP + + + + QI
Sbjct: 236 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 26/210 (12%)
Query: 359 LGHGTYGSVYYGNIRNQ-------EVAIKRMTATKTKE----FMAEMKILCKVHHSNLVE 407
LGHG +G VY G + +VA+K + +++ F+ E I+ K +H N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSLSWIMRVQIALDAARGLEYIH 465
IG + F++ E G LKS L + P+ +SL+ + + +A D A G +Y+
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 466 EHTKTHYVHRDIKSSNILL---DSAFRAKISDFGLAKLVGKTS---DGEATVTKVVGTFG 519
E+ H++HRDI + N LL AKI DFG+A+ + + S G + V
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 217
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++ PE +G+ T+K+D ++FGV+L+EI S
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 26/210 (12%)
Query: 359 LGHGTYGSVYYGNIRNQ-------EVAIKRMTATKTKE----FMAEMKILCKVHHSNLVE 407
LGHG +G VY G + +VA+K + +++ F+ E I+ K +H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSLSWIMRVQIALDAARGLEYIH 465
IG + F++ E G LKS L + P+ +SL+ + + +A D A G +Y+
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 466 EHTKTHYVHRDIKSSNILL---DSAFRAKISDFGLAKLVGKTS---DGEATVTKVVGTFG 519
E+ H++HRDI + N LL AKI DFG+A+ + + S G + V
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPV----K 211
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++ PE +G+ T+K+D ++FGV+L+EI S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 30/291 (10%)
Query: 359 LGHGTYGSV---YYGNIRN---QEVAIKRM---TATKTKEFMAEMKILCKVHHSNLVELI 409
LG G +GSV Y +++ + VA+K++ T ++F E++IL + H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 410 G--YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
G Y+A L LI E+ GSL+ +L + R + I +Q +G+EY+
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER----IDHIKLLQYTSQICKGMEYL--- 133
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
Y+HRD+ + NIL+++ R KI DFGL K++ + + + APE LT
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 528 DGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSM 587
+ + SDV++FGVVL+E+ + E + + A FM + M +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFTYIE------------KSKSPPAEFMRMIGNDKQGQMIV 241
Query: 588 SSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
L + + N P C ++ M+ +C + + RP + + + + QI
Sbjct: 242 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 109/210 (51%), Gaps = 26/210 (12%)
Query: 359 LGHGTYGSVYYGNIRNQ-------EVAIKRMTATKTKE----FMAEMKILCKVHHSNLVE 407
LGHG +G VY G + +VA+K + +++ F+ E I+ K +H N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSLSWIMRVQIALDAARGLEYIH 465
IG + F++ E G LKS L + P+ +SL+ + + +A D A G +Y+
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 466 EHTKTHYVHRDIKSSNILL---DSAFRAKISDFGLAKLV---GKTSDGEATVTKVVGTFG 519
E+ H++HRDI + N LL AKI DFG+A+ + G G + V
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV----K 228
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++ PE +G+ T+K+D ++FGV+L+EI S
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 109/210 (51%), Gaps = 26/210 (12%)
Query: 359 LGHGTYGSVYYGNIRNQ-------EVAIKRMTATKTKE----FMAEMKILCKVHHSNLVE 407
LGHG +G VY G + +VA+K + +++ F+ E I+ K +H N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSLSWIMRVQIALDAARGLEYIH 465
IG + F++ E G LKS L + P+ +SL+ + + +A D A G +Y+
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 466 EHTKTHYVHRDIKSSNILL---DSAFRAKISDFGLAKLV---GKTSDGEATVTKVVGTFG 519
E+ H++HRDI + N LL AKI DFG+A+ + G G + V
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV----K 251
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++ PE +G+ T+K+D ++FGV+L+EI S
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 137/291 (47%), Gaps = 30/291 (10%)
Query: 359 LGHGTYGSV---YYGNIRN---QEVAIKRM---TATKTKEFMAEMKILCKVHHSNLVELI 409
LG G +GSV Y +++ + VA+K++ T ++F E++IL + H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 410 G--YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
G Y+A L LI EY GSL+ +L R + I +Q +G+EY+
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER----IDHIKLLQYTSQICKGMEYL--- 133
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
Y+HRD+ + NIL+++ R KI DFGL K++ + + + APE LT
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 528 DGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSM 587
+ + SDV++FGVVL+E+ + E + + A FM + M +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFTYIE------------KSKSPPAEFMRMIGNDKQGQMIV 241
Query: 588 SSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
L + + N P C ++ M+ +C + + RP + + + + QI
Sbjct: 242 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 26/210 (12%)
Query: 359 LGHGTYGSVYYGNIRNQ-------EVAIKRMTATKTKE----FMAEMKILCKVHHSNLVE 407
LGHG +G VY G + +VA+K + +++ F+ E I+ K +H N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSLSWIMRVQIALDAARGLEYIH 465
IG + F++ E G LKS L + P+ +SL+ + + +A D A G +Y+
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 466 EHTKTHYVHRDIKSSNILL---DSAFRAKISDFGLAKLVGKTS---DGEATVTKVVGTFG 519
E+ H++HRDI + N LL AKI DFG+A+ + + S G + V
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 237
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++ PE +G+ T+K+D ++FGV+L+EI S
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 137/288 (47%), Gaps = 41/288 (14%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTAT-----KTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G++G+VY G +VA+K + T + + F E+ +L K H N++ +GY+
Sbjct: 32 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 89
Query: 414 TEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
T +L ++ ++ + SL HLH +T + IA ARG++Y+H + +
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT---DGL 530
HRD+KS+NI L KI DFGLA + S G ++ G+ ++APE +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-GSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 531 ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSL 590
+ +SDVYAFG+VL+E+++G+ + N R M+ SPD + S
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ--------LPYSNINNRDQIIEMVGRGSLSPDLSKVRS- 252
Query: 591 KDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
+C +M L +C+ + RP +++ + ++
Sbjct: 253 --------------NCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 141/294 (47%), Gaps = 36/294 (12%)
Query: 359 LGHGTYGSV---YYGNIRN---QEVAIKRM---TATKTKEFMAEMKILCKVHHSNLVELI 409
LG G +GSV Y +++ + VA+K++ T ++F E++IL + H N+V+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 410 G--YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
G Y+A L LI EY GSL+ +L + R + I +Q +G+EY+
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYL--- 131
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT---FGYLAPE 524
Y+HR++ + NIL+++ R KI DFGL K++ D E K G F Y APE
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVL--PQDKEYYKVKEPGESPIFWY-APE 188
Query: 525 YLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDS 584
LT+ + SDV++FGVVL+E+ + E + + A FM +
Sbjct: 189 SLTESKFSVASDVWSFGVVLYELFTYIE------------KSKSPPAEFMRMIGNDKQGQ 236
Query: 585 MSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
M + L + + N P C ++ M+ +C + + RP + + + + QI
Sbjct: 237 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 290
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 113/225 (50%), Gaps = 16/225 (7%)
Query: 329 GTDVFDMEKPVVFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIRNQ-EVAIK--RMTAT 385
G+ +KP + DE E LG G +G V+ G +VA+K + +
Sbjct: 1 GSQTQKPQKP--WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM 58
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSL 445
F+AE ++ ++ H LV L T++ +++I EY + GSL L P L
Sbjct: 59 SPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG---IKL 114
Query: 446 SWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTS 505
+ + +A A G+ +I E +Y+HRD++++NIL+ KI+DFGLA+L+
Sbjct: 115 TINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI---E 168
Query: 506 DGEATVTKVVG-TFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
D E T + + APE + G T KSDV++FG++L EI++
Sbjct: 169 DNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIRNQ-EVAIK--RMTATKTKEFMAEMKILCKV 400
DE E LG G +G V+ G +VA+K + + F+AE ++ ++
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 71
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
H LV L T++ +++I EY + GSL L P L+ + +A A G
Sbjct: 72 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEG 127
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFG 519
+ +I E +Y+HRD++++NIL+ KI+DFGLA+L+ D E T +
Sbjct: 128 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIK 181
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ APE + G T KSDV++FG++L EI++
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKV 400
DE E LG G +G V+ G +VA+K + + F+AE ++ ++
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 74
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
H LV L T++ +++I EY + GSL L P L+ + +A A G
Sbjct: 75 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEG 130
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFG 519
+ +I E +Y+HRD++++NIL+ KI+DFGLA+L+ D E T +
Sbjct: 131 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIK 184
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ APE + G T KSDV++FG++L EI++
Sbjct: 185 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKV 400
DE E LG G +G V+ G +VA+K + + F+AE ++ ++
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 67
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
H LV L T++ +++I EY + GSL L P L+ + +A A G
Sbjct: 68 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEG 123
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFG 519
+ +I E +Y+HRD++++NIL+ KI+DFGLA+L+ D E T +
Sbjct: 124 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIK 177
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ APE + G T KSDV++FG++L EI++
Sbjct: 178 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 105/195 (53%), Gaps = 13/195 (6%)
Query: 359 LGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G N +VA+K + + F+ E ++ + H LV L E
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ +++I EY KGSL L + G+ L + + + A G+ YI + +Y+HR
Sbjct: 81 EPIYIITEYMAKGSLLDFLKSDEG-GKVLLPKL--IDFSAQIAEGMAYIE---RKNYIHR 134
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLATAK 534
D++++N+L+ + KI+DFGLA+++ D E T + + APE + G T K
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 535 SDVYAFGVVLFEIIS 549
SDV++FG++L+EI++
Sbjct: 192 SDVWSFGILLYEIVT 206
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIRNQ-EVAIK--RMTATKTKEFMAEMKILCKV 400
DE E LG G +G V+ G +VA+K + + F+AE ++ ++
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
H LV L T++ +++I EY + GSL L P L+ + +A A G
Sbjct: 66 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEG 121
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFG 519
+ +I E +Y+HRD++++NIL+ KI+DFGLA+L+ D E T +
Sbjct: 122 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIK 175
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ APE + G T KSDV++FG++L EI++
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKV 400
DE E LG G +G V+ G +VA+K + + F+AE ++ ++
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 66
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
H LV L T++ +++I EY + GSL L P L+ + +A A G
Sbjct: 67 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEG 122
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFG 519
+ +I E +Y+HRD++++NIL+ KI+DFGLA+L+ D E T +
Sbjct: 123 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIK 176
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ APE + G T KSDV++FG++L EI++
Sbjct: 177 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKV 400
DE E LG G +G V+ G +VA+K + + F+AE ++ ++
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
H LV L T++ +++I EY + GSL L P L+ + +A A G
Sbjct: 66 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEG 121
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFG 519
+ +I E +Y+HRD++++NIL+ KI+DFGLA+L+ D E T +
Sbjct: 122 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIK 175
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ APE + G T KSDV++FG++L EI++
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKV 400
DE E LG G +G V+ G +VA+K + + F+AE ++ ++
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 71
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
H LV L T++ +++I EY + GSL L P L+ + +A A G
Sbjct: 72 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEG 127
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFG 519
+ +I E +Y+HRD++++NIL+ KI+DFGLA+L+ D E T +
Sbjct: 128 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIK 181
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ APE + G T KSDV++FG++L EI++
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIRNQ-EVAIK--RMTATKTKEFMAEMKILCKV 400
DE E LG G +G V+ G +VA+K + + F+AE ++ ++
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 75
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
H LV L T++ +++I EY + GSL L P L+ + +A A G
Sbjct: 76 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEG 131
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFG 519
+ +I E +Y+HRD++++NIL+ KI+DFGLA+L+ D E T +
Sbjct: 132 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIK 185
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ APE + G T KSDV++FG++L EI++
Sbjct: 186 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKV 400
DE E LG G +G V+ G +VA+K + + F+AE ++ ++
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 70
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
H LV L T++ +++I EY + GSL L P L+ + +A A G
Sbjct: 71 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEG 126
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFG 519
+ +I E +Y+HRD++++NIL+ KI+DFGLA+L+ D E T +
Sbjct: 127 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIK 180
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ APE + G T KSDV++FG++L EI++
Sbjct: 181 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 139/309 (44%), Gaps = 47/309 (15%)
Query: 340 VFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIRN-------QEVAIKRMTATKTK---- 388
VF DE + E + LG G++G VY GN R+ VA+K + + +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD--PQ---NRGQT 443
EF+ E ++ ++V L+G + ++ E G LKS+L P+ N G+
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 444 SLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK 503
+ +Q+A + A G+ Y++ +VHRD+ + N ++ F KI DFG+ + + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSK 563
T D K + ++APE L DG+ T SD+++FGVVL+EI S
Sbjct: 183 T-DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------------- 227
Query: 564 NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPI 623
LA L N LK +D +D P +C ++ L + C +P
Sbjct: 228 ------LAEQPYQGLSNE------QVLKFVMDGGYLD-QPDNCPERVTDLMRMCWQFNPK 274
Query: 624 LRPDMKQVV 632
+RP ++V
Sbjct: 275 MRPTFLEIV 283
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 139/309 (44%), Gaps = 47/309 (15%)
Query: 340 VFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIRN-------QEVAIKRMTATKTK---- 388
VF DE + E + LG G++G VY GN R+ VA+K + + +
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD--PQ---NRGQT 443
EF+ E ++ ++V L+G + ++ E G LKS+L P+ N G+
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 444 SLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK 503
+ +Q+A + A G+ Y++ +VHRD+ + N ++ F KI DFG+ + + +
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSK 563
T D K + ++APE L DG+ T SD+++FGVVL+EI S
Sbjct: 180 T-DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------------- 224
Query: 564 NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPI 623
LA L N LK +D +D P +C ++ L + C +P
Sbjct: 225 ------LAEQPYQGLSNE------QVLKFVMDGGYLD-QPDNCPERVTDLMRMCWQFNPK 271
Query: 624 LRPDMKQVV 632
+RP ++V
Sbjct: 272 MRPTFLEIV 280
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKV 400
DE E LG G +G V+ G +VA+K + + F+AE ++ ++
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
H LV L T++ +++I EY + GSL L P L+ + +A A G
Sbjct: 66 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEG 121
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFG 519
+ +I E +Y+HRD++++NIL+ KI+DFGLA+L+ D E T +
Sbjct: 122 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIK 175
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ APE + G T KSDV++FG++L EI++
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 55/309 (17%)
Query: 345 EILFATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRM-------TATKTKEFMAEMKIL 397
EI FA + ++G G +G VY EVA+K + + E K+
Sbjct: 3 EIDFAE--LTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 398 CKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDA 457
+ H N++ L G E L L+ E+A+ G L L + ++W A+
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQI 114
Query: 458 ARGLEYIHEHTKTHYVHRDIKSSNILLDSAFR--------AKISDFGLAKLVGKTSDGEA 509
ARG+ Y+H+ +HRD+KSSNIL+ KI+DFGLA+ +T+ A
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA 174
Query: 510 TVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRS 569
G + ++APE + + + SDV+++GV+L+E+++G+ +G+
Sbjct: 175 A-----GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY----- 224
Query: 570 LASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMK 629
++M+ L I P C A L + C + DP RP
Sbjct: 225 --------------GVAMNKLALPI--------PSTCPEPFAKLMEDCWNPDPHSRPSFT 262
Query: 630 QVVISLSQI 638
++ L+ I
Sbjct: 263 NILDQLTTI 271
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 359 LGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V YG R Q +VAIK + + EF+ E K++ + H LV+L G +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+F+I EY G L ++L + ++R QT +++ D +EY+ ++HR
Sbjct: 92 RPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLE---SKQFLHR 144
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS 535
D+ + N L++ K+SDFGL++ V D E + + PE L ++KS
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYV--LDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 536 DVYAFGVVLFEIIS 549
D++AFGV+++EI S
Sbjct: 203 DIWAFGVLMWEIYS 216
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKV 400
DE E LG G +G V+ G +VA+K + + F+AE ++ ++
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL 60
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
H LV L T++ +++I EY + GSL L P L+ + +A A G
Sbjct: 61 QHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEG 116
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFG 519
+ +I E +Y+HRD++++NIL+ KI+DFGLA+L+ D E T +
Sbjct: 117 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIK 170
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ APE + G T KSDV++FG++L EI++
Sbjct: 171 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 14/195 (7%)
Query: 359 LGHGTYGSVYYGNIRNQ-EVAIK--RMTATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
LG G G V+ G +VA+K + + F+AE ++ ++ H LV L T+
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 79
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ +++I EY + GSL L P L+ + +A A G+ +I E +Y+HR
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLATAK 534
D++++NIL+ KI+DFGLA+L+ D E T + + APE + G T K
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLI---EDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 535 SDVYAFGVVLFEIIS 549
SDV++FG++L EI++
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 139/309 (44%), Gaps = 47/309 (15%)
Query: 340 VFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIRN-------QEVAIKRMTATKTK---- 388
V+ DE + E + LG G++G VY GN R+ VA+K + + +
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD--PQ---NRGQT 443
EF+ E ++ ++V L+G + ++ E G LKS+L P+ N G+
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 444 SLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK 503
+ +Q+A + A G+ Y++ +VHRD+ + N ++ F KI DFG+ + + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSK 563
T D K + ++APE L DG+ T SD+++FGVVL+EI S
Sbjct: 183 T-DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------------- 227
Query: 564 NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPI 623
LA L N LK +D +D P +C ++ L + C +P
Sbjct: 228 ------LAEQPYQGLSNE------QVLKFVMDGGYLD-QPDNCPERVTDLMRMCWQFNPN 274
Query: 624 LRPDMKQVV 632
+RP ++V
Sbjct: 275 MRPTFLEIV 283
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 106/197 (53%), Gaps = 18/197 (9%)
Query: 359 LGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V YG R Q +VAIK + + EF+ E K++ + H LV+L G +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 75
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+F+I EY G L ++L + ++R QT +++ D +EY+ ++HR
Sbjct: 76 RPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLE---SKQFLHR 128
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT---FGYLAPEYLTDGLAT 532
D+ + N L++ K+SDFGL++ V D E T + VG+ + PE L +
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSS--VGSKFPVRWSPPEVLMYSKFS 183
Query: 533 AKSDVYAFGVVLFEIIS 549
+KSD++AFGV+++EI S
Sbjct: 184 SKSDIWAFGVLMWEIYS 200
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 106/197 (53%), Gaps = 18/197 (9%)
Query: 359 LGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V YG R Q +VAIK + + EF+ E K++ + H LV+L G +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 71
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+F+I EY G L ++L + ++R QT +++ D +EY+ ++HR
Sbjct: 72 RPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLE---SKQFLHR 124
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT---FGYLAPEYLTDGLAT 532
D+ + N L++ K+SDFGL++ V D E T + VG+ + PE L +
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSS--VGSKFPVRWSPPEVLMYSKFS 179
Query: 533 AKSDVYAFGVVLFEIIS 549
+KSD++AFGV+++EI S
Sbjct: 180 SKSDIWAFGVLMWEIYS 196
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 106/197 (53%), Gaps = 18/197 (9%)
Query: 359 LGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V YG R Q +VAIK + + EF+ E K++ + H LV+L G +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+F+I EY G L ++L + ++R QT +++ D +EY+ ++HR
Sbjct: 92 RPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLE---SKQFLHR 144
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT---FGYLAPEYLTDGLAT 532
D+ + N L++ K+SDFGL++ V D E T + VG+ + PE L +
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSS--VGSKFPVRWSPPEVLMYSKFS 199
Query: 533 AKSDVYAFGVVLFEIIS 549
+KSD++AFGV+++EI S
Sbjct: 200 SKSDIWAFGVLMWEIYS 216
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 140/313 (44%), Gaps = 70/313 (22%)
Query: 359 LGHGTYGSVYYGNI---------RNQEVAIKRMTATKTK----EFMAEMKILCKV-HHSN 404
LG G +G V R +VA+K + + T+ + ++EM+++ + H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQTSLSWIMRVQI 453
++ L+G + L++I EYA KG+L+ +L ++P + + LS V
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLV------GKTSDG 507
A ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ + KT++G
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 508 EATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQER 567
V ++APE L D + T +SDV++FGV+L+EI +
Sbjct: 254 RLPVK-------WMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------------ 288
Query: 568 RSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRP 626
L SP + + L + P +C ++ M+ + C P RP
Sbjct: 289 ----------LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP 338
Query: 627 DMKQVVISLSQIL 639
KQ+V L +I+
Sbjct: 339 TFKQLVEDLDRIV 351
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 106/197 (53%), Gaps = 18/197 (9%)
Query: 359 LGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V YG R Q +VAIK + + EF+ E K++ + H LV+L G +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+F+I EY G L ++L + ++R QT +++ D +EY+ ++HR
Sbjct: 77 RPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLE---SKQFLHR 129
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT---FGYLAPEYLTDGLAT 532
D+ + N L++ K+SDFGL++ V D E T + VG+ + PE L +
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSS--VGSKFPVRWSPPEVLMYSKFS 184
Query: 533 AKSDVYAFGVVLFEIIS 549
+KSD++AFGV+++EI S
Sbjct: 185 SKSDIWAFGVLMWEIYS 201
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 14/195 (7%)
Query: 359 LGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G +VA+K + + F+AE ++ ++ H LV L T+
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 75
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ +++I EY + GSL L P L+ + +A A G+ +I E +Y+HR
Sbjct: 76 EPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEER---NYIHR 129
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLATAK 534
+++++NIL+ KI+DFGLA+L+ D E T + + APE + G T K
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 535 SDVYAFGVVLFEIIS 549
SDV++FG++L EI++
Sbjct: 187 SDVWSFGILLTEIVT 201
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 105/195 (53%), Gaps = 13/195 (6%)
Query: 359 LGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G N +VA+K + + F+ E ++ + H LV L E
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ +++I E+ KGSL L + G+ L + + + A G+ YI + +Y+HR
Sbjct: 80 EPIYIITEFMAKGSLLDFLKSDEG-GKVLLPKL--IDFSAQIAEGMAYIE---RKNYIHR 133
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLATAK 534
D++++N+L+ + KI+DFGLA+++ D E T + + APE + G T K
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 535 SDVYAFGVVLFEIIS 549
S+V++FG++L+EI++
Sbjct: 191 SNVWSFGILLYEIVT 205
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 140/313 (44%), Gaps = 70/313 (22%)
Query: 359 LGHGTYGSVYYGNI---------RNQEVAIKRMTATKTK----EFMAEMKILCKV-HHSN 404
LG G +G V R +VA+K + + T+ + ++EM+++ + H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQTSLSWIMRVQI 453
++ L+G + L++I EYA KG+L+ +L ++P + + LS V
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLV------GKTSDG 507
A ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ + KT++G
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 508 EATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQER 567
V ++APE L D + T +SDV++FGV+L+EI +
Sbjct: 198 RLPVK-------WMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------------ 232
Query: 568 RSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRP 626
L SP + + L + P +C ++ M+ + C P RP
Sbjct: 233 ----------LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP 282
Query: 627 DMKQVVISLSQIL 639
KQ+V L +I+
Sbjct: 283 TFKQLVEDLDRIV 295
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 140/313 (44%), Gaps = 70/313 (22%)
Query: 359 LGHGTYGSVYYGNI---------RNQEVAIKRMTATKTK----EFMAEMKILCKV-HHSN 404
LG G +G V R +VA+K + + T+ + ++EM+++ + H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQTSLSWIMRVQI 453
++ L+G + L++I EYA KG+L+ +L ++P + + LS V
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLV------GKTSDG 507
A ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ + KT++G
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 508 EATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQER 567
V ++APE L D + T +SDV++FGV+L+EI +
Sbjct: 202 RLPVK-------WMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------------ 236
Query: 568 RSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRP 626
L SP + + L + P +C ++ M+ + C P RP
Sbjct: 237 ----------LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP 286
Query: 627 DMKQVVISLSQIL 639
KQ+V L +I+
Sbjct: 287 TFKQLVEDLDRIV 299
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 144/314 (45%), Gaps = 47/314 (14%)
Query: 340 VFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIR-------NQEVAIKRMTATKTK---- 388
V+ DE A E + S LG G++G VY G + VAIK + +
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSL- 445
EF+ E ++ + + ++V L+G + +I E +G LKS+L P+ L
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 446 --SWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK 503
S +Q+A + A G+ Y++ + +VHRD+ + N ++ F KI DFG+ + + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSK 563
T D K + +++PE L DG+ T SDV++FGVVL+EI + E + +S
Sbjct: 185 T-DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSN 240
Query: 564 NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPI 623
Q R + M L + PD+ D LF+ L + C +P
Sbjct: 241 EQVLRFV---MEGGLLDKPDNCP------------------DMLFE---LMRMCWQYNPK 276
Query: 624 LRPDMKQVVISLSQ 637
+RP +++ S+ +
Sbjct: 277 MRPSFLEIISSIKE 290
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 106/197 (53%), Gaps = 18/197 (9%)
Query: 359 LGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V YG R Q +VAIK + + EF+ E K++ + H LV+L G +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 82
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+F+I EY G L ++L + ++R QT +++ D +EY+ ++HR
Sbjct: 83 RPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLE---SKQFLHR 135
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT---FGYLAPEYLTDGLAT 532
D+ + N L++ K+SDFGL++ V D E T + VG+ + PE L +
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSS--VGSKFPVRWSPPEVLMYSKFS 190
Query: 533 AKSDVYAFGVVLFEIIS 549
+KSD++AFGV+++EI S
Sbjct: 191 SKSDIWAFGVLMWEIYS 207
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 140/313 (44%), Gaps = 70/313 (22%)
Query: 359 LGHGTYGSVYYGNI---------RNQEVAIKRMTATKTK----EFMAEMKILCKV-HHSN 404
LG G +G V R +VA+K + + T+ + ++EM+++ + H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQTSLSWIMRVQI 453
++ L+G + L++I EYA KG+L+ +L ++P + + LS V
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLV------GKTSDG 507
A ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ + KT++G
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 508 EATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQER 567
V ++APE L D + T +SDV++FGV+L+EI +
Sbjct: 205 RLPVK-------WMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------------ 239
Query: 568 RSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRP 626
L SP + + L + P +C ++ M+ + C P RP
Sbjct: 240 ----------LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP 289
Query: 627 DMKQVVISLSQIL 639
KQ+V L +I+
Sbjct: 290 TFKQLVEDLDRIV 302
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 140/313 (44%), Gaps = 70/313 (22%)
Query: 359 LGHGTYGSVYYGNI---------RNQEVAIKRMTATKTK----EFMAEMKILCKV-HHSN 404
LG G +G V R +VA+K + + T+ + ++EM+++ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQTSLSWIMRVQI 453
++ L+G + L++I EYA KG+L+ +L ++P + + LS V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLV------GKTSDG 507
A ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ + KT++G
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 508 EATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQER 567
V ++APE L D + T +SDV++FGV+L+EI +
Sbjct: 213 RLPVK-------WMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------------ 247
Query: 568 RSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRP 626
L SP + + L + P +C ++ M+ + C P RP
Sbjct: 248 ----------LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP 297
Query: 627 DMKQVVISLSQIL 639
KQ+V L +I+
Sbjct: 298 TFKQLVEDLDRIV 310
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 139/309 (44%), Gaps = 47/309 (15%)
Query: 340 VFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIRN-------QEVAIKRMTATKTK---- 388
VF DE + E + LG G++G VY GN R+ VA+K + + +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD--PQ---NRGQT 443
EF+ E ++ ++V L+G + ++ E G LKS+L P+ N G+
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 444 SLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK 503
+ +Q+A + A G+ Y++ +VHRD+ + N ++ F KI DFG+ + + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSK 563
T D K + ++APE L DG+ T SD+++FGVVL+EI S
Sbjct: 183 T-DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------------- 227
Query: 564 NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPI 623
LA L N LK +D +D P +C ++ L + C +P
Sbjct: 228 ------LAEQPYQGLSNE------QVLKFVMDGGYLD-QPDNCPERVTDLMRMCWQFNPK 274
Query: 624 LRPDMKQVV 632
+RP ++V
Sbjct: 275 MRPTFLEIV 283
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 140/313 (44%), Gaps = 70/313 (22%)
Query: 359 LGHGTYGSVYYGNI---------RNQEVAIKRMTATKTK----EFMAEMKILCKV-HHSN 404
LG G +G V R +VA+K + + T+ + ++EM+++ + H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQTSLSWIMRVQI 453
++ L+G + L++I EYA KG+L+ +L ++P + + LS V
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLV------GKTSDG 507
A ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ + KT++G
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 508 EATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQER 567
V ++APE L D + T +SDV++FGV+L+EI +
Sbjct: 206 RLPVK-------WMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------------ 240
Query: 568 RSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRP 626
L SP + + L + P +C ++ M+ + C P RP
Sbjct: 241 ----------LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP 290
Query: 627 DMKQVVISLSQIL 639
KQ+V L +I+
Sbjct: 291 TFKQLVEDLDRIV 303
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 20/212 (9%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + T + E F+ E +++ K+ H LV+L +E
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 77
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTS--LSWIMRVQIALDAARGLEYIHEHTKTHYV 473
+ ++++ EY KGSL L +G+T L V +A A G+ Y+ + +YV
Sbjct: 78 EPIYIVTEYMSKGSLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 129
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLAT 532
HRD++++NIL+ K++DFGLA+L+ D E T + + APE G T
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 186
Query: 533 AKSDVYAFGVVLFEIISGKEAIIRTEGMVSKN 564
KSDV++FG++L E+ + + + GMV++
Sbjct: 187 IKSDVWSFGILLTELTT--KGRVPYPGMVNRE 216
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 140/313 (44%), Gaps = 70/313 (22%)
Query: 359 LGHGTYGSVYYGNI---------RNQEVAIKRMTATKTK----EFMAEMKILCKV-HHSN 404
LG G +G V R +VA+K + + T+ + ++EM+++ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQTSLSWIMRVQI 453
++ L+G + L++I EYA KG+L+ +L ++P + + LS V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLV------GKTSDG 507
A ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ + KT++G
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 508 EATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQER 567
V ++APE L D + T +SDV++FGV+L+EI +
Sbjct: 213 RLPVK-------WMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------------ 247
Query: 568 RSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRP 626
L SP + + L + P +C ++ M+ + C P RP
Sbjct: 248 ----------LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP 297
Query: 627 DMKQVVISLSQIL 639
KQ+V L +I+
Sbjct: 298 TFKQLVEDLDRIV 310
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 18/197 (9%)
Query: 359 LGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V YG R Q +VAIK + + EF+ E K++ + H LV+L G +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+F+I EY G L ++L + ++R QT +++ D +EY+ ++HR
Sbjct: 77 RPIFIITEYMANGCLLNYLREMRHRFQTQ----QLLEMCKDVCEAMEYLE---SKQFLHR 129
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT---FGYLAPEYLTDGLAT 532
D+ + N L++ K+SDFGL++ V D E T ++ G+ + PE L +
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSSR--GSKFPVRWSPPEVLMYSKFS 184
Query: 533 AKSDVYAFGVVLFEIIS 549
+KSD++AFGV+++EI S
Sbjct: 185 SKSDIWAFGVLMWEIYS 201
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 140/313 (44%), Gaps = 70/313 (22%)
Query: 359 LGHGTYGSVYYGNI---------RNQEVAIKRMTATKTK----EFMAEMKILCKV-HHSN 404
LG G +G V R +VA+K + + T+ + ++EM+++ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQTSLSWIMRVQI 453
++ L+G + L++I EYA KG+L+ +L ++P + + LS V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLV------GKTSDG 507
A ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ + KT++G
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 508 EATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQER 567
V ++APE L D + T +SDV++FGV+L+EI +
Sbjct: 213 RLPVK-------WMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------------ 247
Query: 568 RSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRP 626
L SP + + L + P +C ++ M+ + C P RP
Sbjct: 248 ----------LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP 297
Query: 627 DMKQVVISLSQIL 639
KQ+V L +I+
Sbjct: 298 TFKQLVEDLDRIV 310
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 139/313 (44%), Gaps = 70/313 (22%)
Query: 359 LGHGTYGSVYYGNI---------RNQEVAIKRMTATKTK----EFMAEMKILCKV-HHSN 404
LG G +G V R +VA+K + + T+ + ++EM+++ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHLH-----------DPQNRGQTSLSWIMRVQI 453
++ L+G + L++I EYA KG+L+ +L +P + + LS V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLV------GKTSDG 507
A ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ + KT++G
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 508 EATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQER 567
V ++APE L D + T +SDV++FGV+L+EI +
Sbjct: 213 RLPVK-------WMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------------ 247
Query: 568 RSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRP 626
L SP + + L + P +C ++ M+ + C P RP
Sbjct: 248 ----------LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP 297
Query: 627 DMKQVVISLSQIL 639
KQ+V L +I+
Sbjct: 298 TFKQLVEDLDRIV 310
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 141/296 (47%), Gaps = 49/296 (16%)
Query: 357 SLLGHGTYGSVYYGNI-----RNQEVAIKRM----TATKTKEFMAEMKILCKVHHSNLVE 407
++G G +G V G++ R VAIK + T + ++F++E I+ + H N++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
L G + +I E+ + GSL S L QN GQ ++ I V + A G++Y+ +
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLR--QNDGQFTV--IQLVGMLRGIAAGMKYLAD- 153
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVG---TFGYLAP 523
+YVHRD+ + NIL++S K+SDFGL++ L TSD T T +G + AP
Sbjct: 154 --MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD--PTYTSALGGKIPIRWTAP 209
Query: 524 EYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPD 583
E + T+ SDV+++G+V++E++S E R + N+ +
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEVMSYGE---------------RPYWDMTNQDVINAIE 254
Query: 584 SMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQIL 639
+DY P P DC + L C +D RP Q+V +L +++
Sbjct: 255 -------QDYRLPP-----PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 298
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 357 SLLGHGTYGSVYY------GNIRNQEVAIKRMTAT---KTKEFMAEMKILCKVHHSNLVE 407
S LG G +GSV G+ VA+K++ + + ++F E++IL +H +V+
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 408 LIG--YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
G Y EL L+ EY G L+ L + R S + QI +G+EY+
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC----KGMEYL- 127
Query: 466 EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEY 525
VHRD+ + NIL++S KI+DFGLAKL+ D + APE
Sbjct: 128 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 526 LTDGLATAKSDVYAFGVVLFEIIS 549
L+D + + +SDV++FGVVL+E+ +
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 144/314 (45%), Gaps = 47/314 (14%)
Query: 340 VFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIR-------NQEVAIKRMTATKTK---- 388
VF DE A E + S LG G++G VY G + VAIK + +
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSL- 445
EF+ E ++ + + ++V L+G + +I E +G LKS+L P+ L
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 446 --SWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK 503
S +Q+A + A G+ Y++ + +VHRD+ + N ++ F KI DFG+ + + +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSK 563
T D K + +++PE L DG+ T SDV++FGVVL+EI + E + +S
Sbjct: 182 T-DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSN 237
Query: 564 NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPI 623
Q R + M L + PD+ D LF+ L + C +P
Sbjct: 238 EQVLRFV---MEGGLLDKPDNCP------------------DMLFE---LMRMCWQYNPK 273
Query: 624 LRPDMKQVVISLSQ 637
+RP +++ S+ +
Sbjct: 274 MRPSFLEIISSIKE 287
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 20/212 (9%)
Query: 359 LGHGTYGSVYYGNIRNQ-EVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + T + E F+ E +++ K+ H LV+L +E
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 333
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTS--LSWIMRVQIALDAARGLEYIHEHTKTHYV 473
+ ++++ EY KGSL L +G+T L V +A A G+ Y+ + +YV
Sbjct: 334 EPIYIVTEYMSKGSLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 385
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLAT 532
HRD++++NIL+ K++DFGLA+L+ D E T + + APE G T
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 442
Query: 533 AKSDVYAFGVVLFEIISGKEAIIRTEGMVSKN 564
KSDV++FG++L E+ + + + GMV++
Sbjct: 443 IKSDVWSFGILLTELTT--KGRVPYPGMVNRE 472
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 139/294 (47%), Gaps = 47/294 (15%)
Query: 358 LLGHGTYGSVYYGNIR---NQE--VAIKRM----TATKTKEFMAEMKILCKVHHSNLVEL 408
++G G +G V G ++ +E VAIK + T + +EF++E I+ + H N++ L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
G + ++ E+ + G+L S L N GQ ++ I V + A G+ Y+ E +
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLR--LNDGQFTV--IQLVGMLRGIASGMRYLAEMS 136
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG---TFGYLAPEY 525
YVHRD+ + NIL++S K+SDFGL++ + + S + T T +G + APE
Sbjct: 137 ---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS-DPTYTSSLGGKIPIRWTAPEA 192
Query: 526 LTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSM 585
+ T+ SD +++G+V++E++S E R D M
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGE--------------------------RPYWD-M 225
Query: 586 SMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQIL 639
S + + I+ + P DC + L C +D RP QVV +L +++
Sbjct: 226 SNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 279
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 45/293 (15%)
Query: 358 LLGHGTYGSVYYGNIR---NQE--VAIKRM----TATKTKEFMAEMKILCKVHHSNLVEL 408
++G G +G V G ++ +E VAIK + T + +EF++E I+ + H N++ L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
G + ++ E+ + G+L S L N GQ ++ I V + A G+ Y+ E +
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLR--LNDGQFTV--IQLVGMLRGIASGMRYLAEMS 138
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFG--YLAPEYL 526
YVHRD+ + NIL++S K+SDFGL++ + + S + + G + APE +
Sbjct: 139 ---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 527 TDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMS 586
T+ SD +++G+V++E++S E R D MS
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMSFGE--------------------------RPYWD-MS 228
Query: 587 MSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQIL 639
+ + I+ + P DC + L C +D RP QVV +L +++
Sbjct: 229 NQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 281
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 16/210 (7%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + T + E F+ E +++ K+ H LV+L +E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ ++++ EY KGSL L + L V +A A G+ Y+ + +YVHR
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLATAK 534
D++++NIL+ K++DFGLA+L+ D E T + + APE G T K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKN 564
SDV++FG++L E+ + + + GMV++
Sbjct: 196 SDVWSFGILLTELTT--KGRVPYPGMVNRE 223
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 16/210 (7%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + T + E F+ E +++ K+ H LV+L +E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYA-VVSE 84
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ ++++ EY KGSL L + L V +A A G+ Y+ + +YVHR
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLATAK 534
D++++NIL+ K++DFGLA+L+ D E T + + APE G T K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKN 564
SDV++FG++L E+ + + + GMV++
Sbjct: 196 SDVWSFGILLTELTT--KGRVPYPGMVNRE 223
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 140/312 (44%), Gaps = 53/312 (16%)
Query: 340 VFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIRN-------QEVAIKRMTATKTK---- 388
VF DE + E + LG G++G VY GN R+ VA+K + + +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD--PQ---NRGQT 443
EF+ E ++ ++V L+G + ++ E G LKS+L P+ N G+
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 444 SLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK 503
+ +Q+A + A G+ Y++ +VHRD+ + N ++ F KI DFG+ + + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 504 TS---DGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGM 560
T+ G + V ++APE L DG+ T SD+++FGVVL+EI S
Sbjct: 183 TAYYRKGGKGLLPV----RWMAPESLKDGVFTTSSDMWSFGVVLWEITS----------- 227
Query: 561 VSKNQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDE 620
LA L N LK +D +D P +C ++ L + C
Sbjct: 228 ---------LAEQPYQGLSNE------QVLKFVMDGGYLD-QPDNCPERVTDLMRMCWQF 271
Query: 621 DPILRPDMKQVV 632
+P +RP ++V
Sbjct: 272 NPKMRPTFLEIV 283
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 20/212 (9%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + T + E F+ E +++ K+ H LV+L +E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 81
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTS--LSWIMRVQIALDAARGLEYIHEHTKTHYV 473
+ ++++ EY KGSL L +G+T L V ++ A G+ Y+ + +YV
Sbjct: 82 EPIYIVTEYMNKGSLLDFL-----KGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYV 133
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLAT 532
HRD++++NIL+ K++DFGLA+L+ D E T + + APE G T
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLI---EDNEWTARQGAKFPIKWTAPEAALYGRFT 190
Query: 533 AKSDVYAFGVVLFEIISGKEAIIRTEGMVSKN 564
KSDV++FG++L E+ + + + GMV++
Sbjct: 191 IKSDVWSFGILLTELTT--KGRVPYPGMVNRE 220
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 20/212 (9%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + T + E F+ E +++ K+ H LV+L +E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTS--LSWIMRVQIALDAARGLEYIHEHTKTHYV 473
+ ++++ EY KGSL L +G+T L V +A A G+ Y+ + +YV
Sbjct: 251 EPIYIVTEYMSKGSLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 302
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLAT 532
HRD++++NIL+ K++DFGLA+L+ D E T + + APE G T
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 533 AKSDVYAFGVVLFEIISGKEAIIRTEGMVSKN 564
KSDV++FG++L E+ + + + GMV++
Sbjct: 360 IKSDVWSFGILLTELTT--KGRVPYPGMVNRE 389
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 112/212 (52%), Gaps = 20/212 (9%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + T + E F+ E +++ K+ H LV+L +E
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 74
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTS--LSWIMRVQIALDAARGLEYIHEHTKTHYV 473
+ + ++ EY KGSL L +G+T L V +A A G+ Y+ + +YV
Sbjct: 75 EPIXIVTEYMSKGSLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 126
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLAT 532
HRD++++NIL+ K++DFGLA+L+ D E T + + APE G T
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFT 183
Query: 533 AKSDVYAFGVVLFEIISGKEAIIRTEGMVSKN 564
KSDV++FG++L E+ + + + GMV++
Sbjct: 184 IKSDVWSFGILLTELTT--KGRVPYPGMVNRE 213
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 20/212 (9%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + T + E F+ E +++ K+ H LV+L +E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTS--LSWIMRVQIALDAARGLEYIHEHTKTHYV 473
+ ++++ EY KGSL L +G+T L V +A A G+ Y+ + +YV
Sbjct: 251 EPIYIVTEYMSKGSLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 302
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLAT 532
HRD++++NIL+ K++DFGLA+L+ D E T + + APE G T
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 533 AKSDVYAFGVVLFEIISGKEAIIRTEGMVSKN 564
KSDV++FG++L E+ + + + GMV++
Sbjct: 360 IKSDVWSFGILLTELTT--KGRVPYPGMVNRE 389
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 16/210 (7%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + T + E F+ E +++ K+ H LV+L +E
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 73
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ ++++ EY KGSL L + L V +A A G+ Y+ + +YVHR
Sbjct: 74 EPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 127
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLATAK 534
D++++NIL+ K++DFGLA+L+ D E T + + APE G T K
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKN 564
SDV++FG++L E+ + + + GMV++
Sbjct: 185 SDVWSFGILLTELTT--KGRVPYPGMVNRE 212
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 20/212 (9%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + T + E F+ E +++ K+ H LV+L +E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 81
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTS--LSWIMRVQIALDAARGLEYIHEHTKTHYV 473
+ ++++ EY KGSL L +G+T L V ++ A G+ Y+ + +YV
Sbjct: 82 EPIYIVTEYMNKGSLLDFL-----KGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYV 133
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLAT 532
HRD++++NIL+ K++DFGLA+L+ D E T + + APE G T
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 190
Query: 533 AKSDVYAFGVVLFEIISGKEAIIRTEGMVSKN 564
KSDV++FG++L E+ + + + GMV++
Sbjct: 191 IKSDVWSFGILLTELTT--KGRVPYPGMVNRE 220
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 16/210 (7%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + T + E F+ E +++ K+ H LV+L +E
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 75
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ ++++ EY KGSL L + L V +A A G+ Y+ + +YVHR
Sbjct: 76 EPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 129
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLATAK 534
D++++NIL+ K++DFGLA+L+ D E T + + APE G T K
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKN 564
SDV++FG++L E+ + + + GMV++
Sbjct: 187 SDVWSFGILLTELTT--KGRVPYPGMVNRE 214
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 16/210 (7%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + T + E F+ E +++ K+ H LV+L +E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ ++++ EY KGSL L + L V +A A G+ Y+ + +YVHR
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLATAK 534
D++++NIL+ K++DFGLA+L+ D E T + + APE G T K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKN 564
SDV++FG++L E+ + + + GMV++
Sbjct: 196 SDVWSFGILLTELTT--KGRVPYPGMVNRE 223
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 137/294 (46%), Gaps = 48/294 (16%)
Query: 358 LLGHGTYGSVYYGNIRNQE------VAIKRMTATKTK----EFMAEMKILCKVHHSNLVE 407
++G G +G VY G ++ VAIK + A T+ +F+ E I+ + H N++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
L G + + +I EY + G+L L + S + V + A G++Y+
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDG----EFSVLQLVGMLRGIAAGMKYL--- 163
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFG--YLAPEY 525
+YVHRD+ + NIL++S K+SDFGL++++ D EAT T G + APE
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL--EDDPEATYTTSGGKIPIRWTAPEA 221
Query: 526 LTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSM 585
++ T+ SDV++FG+V++E+++ E R +S ++ +++ D
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGE---RPYWELSNHEVMKAIN-----------DGF 267
Query: 586 SMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQIL 639
+ + P DC + L QC ++ RP +V L +++
Sbjct: 268 RLPT-------------PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 144/314 (45%), Gaps = 47/314 (14%)
Query: 340 VFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIR-------NQEVAIKRMTATKTK---- 388
V+ DE A E + S LG G++G VY G + VAIK + +
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSL- 445
EF+ E ++ + + ++V L+G + +I E +G LKS+L P+ L
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 446 --SWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK 503
S +Q+A + A G+ Y++ + +VHRD+ + N ++ F KI DFG+ + + +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSK 563
T D K + +++PE L DG+ T SDV++FGVVL+EI + E + +S
Sbjct: 184 T-DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSN 239
Query: 564 NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPI 623
Q R + M L + PD+ D LF+ L + C +P
Sbjct: 240 EQVLRFV---MEGGLLDKPDNCP------------------DMLFE---LMRMCWQYNPK 275
Query: 624 LRPDMKQVVISLSQ 637
+RP +++ S+ +
Sbjct: 276 MRPSFLEIISSIKE 289
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 12/195 (6%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + S ++ + +A + +EY+ K +++H
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLREC-NRQEVSA--VVLLYMATQISSAMEYLE---KKNFIH 132
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 535 SDVYAFGVVLFEIIS 549
SDV+AFGV+L+EI +
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 20/212 (9%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + T + E F+ E +++ K+ H LV+L +E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTS--LSWIMRVQIALDAARGLEYIHEHTKTHYV 473
+ ++++ EY KGSL L +G+T L V +A A G+ Y+ + +YV
Sbjct: 251 EPIYIVGEYMSKGSLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 302
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLAT 532
HRD++++NIL+ K++DFGLA+L+ D E T + + APE G T
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 533 AKSDVYAFGVVLFEIISGKEAIIRTEGMVSKN 564
KSDV++FG++L E+ + + + GMV++
Sbjct: 360 IKSDVWSFGILLTELTT--KGRVPYPGMVNRE 389
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 127/272 (46%), Gaps = 41/272 (15%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + T + E F+ E +++ K+ H LV+L +E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ ++++ EY KGSL L + L V +A A G+ Y+ + +YVHR
Sbjct: 85 EPIYIVCEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLATAK 534
D++++NIL+ K++DFGLA+L+ D E T + + APE G T K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSLKDYI 594
SDV++FG++L E+ + + + GMV++ + + + P+S+
Sbjct: 196 SDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPECPESL--------- 244
Query: 595 DPNMMDLYPHDCLFKMAMLAKQCVDEDPILRP 626
HD L QC +DP RP
Sbjct: 245 ---------HD-------LMCQCWRKDPEERP 260
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 144/314 (45%), Gaps = 47/314 (14%)
Query: 340 VFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIR-------NQEVAIKRMTATKTK---- 388
V+ DE A E + S LG G++G VY G + VAIK + +
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSL- 445
EF+ E ++ + + ++V L+G + +I E +G LKS+L P+ L
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 446 --SWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK 503
S +Q+A + A G+ Y++ + +VHRD+ + N ++ F KI DFG+ + + +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSK 563
T D K + +++PE L DG+ T SDV++FGVVL+EI + E + +S
Sbjct: 191 T-DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSN 246
Query: 564 NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPI 623
Q R + M L + PD+ D LF+ L + C +P
Sbjct: 247 EQVLRFV---MEGGLLDKPDNCP------------------DMLFE---LMRMCWQYNPK 282
Query: 624 LRPDMKQVVISLSQ 637
+RP +++ S+ +
Sbjct: 283 MRPSFLEIISSIKE 296
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 16/210 (7%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + T + E F+ E +++ K+ H LV+L +E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ ++++ EY KGSL L + L V +A A G+ Y+ + +YVHR
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLATAK 534
D++++NIL+ K++DFGLA+L+ D E T + + APE G T K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKN 564
SDV++FG++L E+ + + + GMV++
Sbjct: 196 SDVWSFGILLTELTT--KGRVPYPGMVNRE 223
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 140/310 (45%), Gaps = 47/310 (15%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIR-------NQEVAIKRMTATKTK----EFMA 392
DE A E + S LG G++G VY G + VAIK + + EF+
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 393 EMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSL---SW 447
E ++ + + ++V L+G + +I E +G LKS+L P+ L S
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 448 IMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDG 507
+Q+A + A G+ Y++ + +VHRD+ + N ++ F KI DFG+ + + +T D
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET-DX 178
Query: 508 EATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQER 567
K + +++PE L DG+ T SDV++FGVVL+EI
Sbjct: 179 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA------------------- 219
Query: 568 RSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPD 627
+LA L N L+ ++ ++D P +C + L + C +P +RP
Sbjct: 220 -TLAEQPYQGLSNE------QVLRFVMEGGLLD-KPDNCPDMLLELMRMCWQYNPKMRPS 271
Query: 628 MKQVVISLSQ 637
+++ S+ +
Sbjct: 272 FLEIISSIKE 281
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 144/314 (45%), Gaps = 47/314 (14%)
Query: 340 VFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIR-------NQEVAIKRMTATKTK---- 388
V+ DE A E + S LG G++G VY G + VAIK + +
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSL- 445
EF+ E ++ + + ++V L+G + +I E +G LKS+L P+ L
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 446 --SWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK 503
S +Q+A + A G+ Y++ + +VHRD+ + N ++ F KI DFG+ + + +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSK 563
T D K + +++PE L DG+ T SDV++FGVVL+EI + E + +S
Sbjct: 184 T-DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSN 239
Query: 564 NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPI 623
Q R + M L + PD+ D LF+ L + C +P
Sbjct: 240 EQVLRFV---MEGGLLDKPDNCP------------------DMLFE---LMRMCWQYNPK 275
Query: 624 LRPDMKQVVISLSQ 637
+RP +++ S+ +
Sbjct: 276 MRPSFLEIISSIKE 289
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 144/314 (45%), Gaps = 47/314 (14%)
Query: 340 VFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIR-------NQEVAIKRMTATKTK---- 388
V+ DE A E + S LG G++G VY G + VAIK + +
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSL- 445
EF+ E ++ + + ++V L+G + +I E +G LKS+L P+ L
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 446 --SWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK 503
S +Q+A + A G+ Y++ + +VHRD+ + N ++ F KI DFG+ + + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 184
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSK 563
T D K + +++PE L DG+ T SDV++FGVVL+EI + E + +S
Sbjct: 185 T-DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSN 240
Query: 564 NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPI 623
Q R + M L + PD+ D LF+ L + C +P
Sbjct: 241 EQVLRFV---MEGGLLDKPDNCP------------------DMLFE---LMRMCWQYNPK 276
Query: 624 LRPDMKQVVISLSQ 637
+RP +++ S+ +
Sbjct: 277 MRPSFLEIISSIKE 290
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 106/195 (54%), Gaps = 14/195 (7%)
Query: 359 LGHGTYGSVYYGNI-RNQEVAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ ++ +VA+K M + + F+AE ++ + H LV+L T+
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTK 81
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ +++I E+ KGSL L + Q I + A G+ +I + +Y+HR
Sbjct: 82 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI---DFSAQIAEGMAFIEQR---NYIHR 135
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLATAK 534
D++++NIL+ ++ KI+DFGLA+++ D E T + + APE + G T K
Sbjct: 136 DLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 535 SDVYAFGVVLFEIIS 549
SDV++FG++L EI++
Sbjct: 193 SDVWSFGILLMEIVT 207
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 144/314 (45%), Gaps = 47/314 (14%)
Query: 340 VFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIR-------NQEVAIKRMTATKTK---- 388
V+ DE A E + S LG G++G VY G + VAIK + +
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 95
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSL- 445
EF+ E ++ + + ++V L+G + +I E +G LKS+L P+ L
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 446 --SWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK 503
S +Q+A + A G+ Y++ + +VHRD+ + N ++ F KI DFG+ + + +
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 212
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSK 563
T D K + +++PE L DG+ T SDV++FGVVL+EI + E + +S
Sbjct: 213 T-DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSN 268
Query: 564 NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPI 623
Q R + M L + PD+ D LF+ L + C +P
Sbjct: 269 EQVLRFV---MEGGLLDKPDNCP------------------DMLFE---LMRMCWQYNPK 304
Query: 624 LRPDMKQVVISLSQ 637
+RP +++ S+ +
Sbjct: 305 MRPSFLEIISSIKE 318
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 41/278 (14%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + S ++ + +A + +EY+ K +++H
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLREC-NRQEVSA--VVLLYMATQISSAMEYLE---KKNFIH 134
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDY 593
SDV+AFGV+L+EI T GM SP + +S + +
Sbjct: 193 SDVWAFGVLLWEIA--------TYGM--------------------SPYPGIDLSQVYEL 224
Query: 594 IDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQV 631
++ + P C K+ L + C +P RP ++
Sbjct: 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 41/278 (14%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + S ++ + +A + +EY+ K +++H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLREC-NRQEVSA--VVLLYMATQISSAMEYLE---KKNFIH 139
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDY 593
SDV+AFGV+L+EI T GM SP + +S + +
Sbjct: 198 SDVWAFGVLLWEIA--------TYGM--------------------SPYPGIDLSQVYEL 229
Query: 594 IDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQV 631
++ + P C K+ L + C +P RP ++
Sbjct: 230 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 41/278 (14%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + S ++ + +A + +EY+ K +++H
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLREC-NRQEVSA--VVLLYMATQISSAMEYLE---KKNFIH 134
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDY 593
SDV+AFGV+L+EI T GM SP + +S + +
Sbjct: 193 SDVWAFGVLLWEIA--------TYGM--------------------SPYPGIDLSQVYEL 224
Query: 594 IDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQV 631
++ + P C K+ L + C +P RP ++
Sbjct: 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 131/295 (44%), Gaps = 51/295 (17%)
Query: 358 LLGHGTYGSVYYGNIR-----NQEVAIKRM----TATKTKEFMAEMKILCKVHHSNLVEL 408
++G G +G V G ++ VAIK + T + ++F+ E I+ + H N++ L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHL--HDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G + ++ EY + GSL S L HD Q + I V + A G++Y+ +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGMLRGIASGMKYLSD 165
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT--FGYLAPE 524
YVHRD+ + NIL++S K+SDFGLA+++ D EA T G + +PE
Sbjct: 166 ---MGYVHRDLAARNILINSNLVCKVSDFGLARVL--EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 525 YLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDS 584
+ T+ SDV+++G+VL+E++S E
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---------------------------E 253
Query: 585 MSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQIL 639
MS + +D P DC + L C +D RP +Q+V L +++
Sbjct: 254 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 137/304 (45%), Gaps = 45/304 (14%)
Query: 337 KPVVF----TYDEILFATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTK 388
KP ++ YD+ + LG G YG VY G + VA+K + + +
Sbjct: 202 KPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE 261
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWI 448
EF+ E ++ ++ H NLV+L+G E ++I E+ G+L +L + NR + S +
Sbjct: 262 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSA--V 318
Query: 449 MRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGE 508
+ + +A + +EY+ K +++HR++ + N L+ K++DFGL++L+ T D
Sbjct: 319 VLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM--TGDTY 373
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERR 568
+ APE L + KSDV+AFGV+L+EI T GM
Sbjct: 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA--------TYGM-------- 417
Query: 569 SLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPD 627
SP + +S + + ++ + P C K+ L + C +P RP
Sbjct: 418 ------------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 465
Query: 628 MKQV 631
++
Sbjct: 466 FAEI 469
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 358 LLGHGTYGSVYYGNIR-----NQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVEL 408
++G G G V YG +R + VAIK + A T ++F++E I+ + H N++ L
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHL--HDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G ++ EY + GSL + L HD GQ ++ ++ + + A G+ Y+
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHD----GQFTIMQLVGMLRGVGA--GMRYL-- 167
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL 526
+ YVHRD+ + N+L+DS K+SDFGL++++ D T T + APE +
Sbjct: 168 -SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAI 226
Query: 527 TDGLATAKSDVYAFGVVLFEIISGKE 552
++ SDV++FGVV++E+++ E
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLAYGE 252
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 41/278 (14%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + S ++ + +A + +EY+ K +++H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLREC-NRQEVSA--VVLLYMATQISSAMEYLE---KKNFIH 134
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDY 593
SDV+AFGV+L+EI T GM SP + +S + +
Sbjct: 193 SDVWAFGVLLWEIA--------TYGM--------------------SPYPGIDLSQVYEL 224
Query: 594 IDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQV 631
++ + P C K+ L + C +P RP ++
Sbjct: 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 102/195 (52%), Gaps = 12/195 (6%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E +++ EY G+L +L + T+ ++ + +A + +EY+ K +++H
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNREEVTA---VVLLYMATQISSAMEYLE---KKNFIH 153
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 535 SDVYAFGVVLFEIIS 549
SDV+AFGV+L+EI +
Sbjct: 212 SDVWAFGVLLWEIAT 226
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 41/278 (14%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + S ++ + +A + +EY+ K +++H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLREC-NRQEVSA--VVLLYMATQISSAMEYLE---KKNFIH 134
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDY 593
SDV+AFGV+L+EI T GM SP + +S + +
Sbjct: 193 SDVWAFGVLLWEIA--------TYGM--------------------SPYPGIDLSQVYEL 224
Query: 594 IDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQV 631
++ + P C K+ L + C +P RP ++
Sbjct: 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYY------GNIRNQEVAIKRMTAT---KTKEFMAEM 394
D +F S LG G +GSV G+ VA+K++ + + ++F E+
Sbjct: 4 DPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREI 63
Query: 395 KILCKVHHSNLVELIG--YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
+IL +H +V+ G Y L L+ EY G L+ L + R S + Q
Sbjct: 64 QILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ 123
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVT 512
I +G+EY+ VHRD+ + NIL++S KI+DFGLAKL+ D
Sbjct: 124 IC----KGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVRE 176
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ APE L+D + + +SDV++FGVVL+E+ +
Sbjct: 177 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 20/203 (9%)
Query: 358 LLGHGTYGSVYYGNI-----RNQEVAIKRM----TATKTKEFMAEMKILCKVHHSNLVEL 408
++G G +G V G + R VAIK + T + ++F+ E I+ + H N++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
G + ++ EY + GSL + L +N GQ ++ I V + + G++Y+ +
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLK--KNDGQFTV--IQLVGMLRGISAGMKYL---S 141
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFG--YLAPEYL 526
YVHRD+ + NIL++S K+SDFGL++++ D EA T G + APE +
Sbjct: 142 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTAPEAI 199
Query: 527 TDGLATAKSDVYAFGVVLFEIIS 549
T+ SDV+++G+V++E++S
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 12/195 (6%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + + ++ + +A + +EY+ K +++H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE-CNRQEVNA--VVLLYMATQISSAMEYLE---KKNFIH 139
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 535 SDVYAFGVVLFEIIS 549
SDV+AFGV+L+EI +
Sbjct: 198 SDVWAFGVLLWEIAT 212
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 12/195 (6%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + + ++ + +A + +EY+ K +++H
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLREC-NRQEVNA--VVLLYMATQISSAMEYLE---KKNFIH 135
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 193
Query: 535 SDVYAFGVVLFEIIS 549
SDV+AFGV+L+EI +
Sbjct: 194 SDVWAFGVLLWEIAT 208
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYY------GNIRNQEVAIKRMTAT---KTKEFMAEM 394
D +F S LG G +GSV G+ VA+K++ + + ++F E+
Sbjct: 3 DPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREI 62
Query: 395 KILCKVHHSNLVELIG--YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
+IL +H +V+ G Y L L+ EY G L+ L + R S + Q
Sbjct: 63 QILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ 122
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVT 512
I +G+EY+ VHRD+ + NIL++S KI+DFGLAKL+ D
Sbjct: 123 IC----KGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVRE 175
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ APE L+D + + +SDV++FGVVL+E+ +
Sbjct: 176 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 107/198 (54%), Gaps = 18/198 (9%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + S ++ + +A + +EY+ K +++H
Sbjct: 79 EPPFYIITEFMTYGNLLDYLREC-NRQEVSA--VVLLYMATQISSAMEYLE---KKNFIH 132
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT---FGYLAPEYLTDGLA 531
RD+ + N L+ K++DFGL++L+ T D T T G + APE L
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM--TGD---TFTAHAGAKFPIKWTAPESLAYNKF 187
Query: 532 TAKSDVYAFGVVLFEIIS 549
+ KSDV+AFGV+L+EI +
Sbjct: 188 SIKSDVWAFGVLLWEIAT 205
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYY------GNIRNQEVAIKRMTAT---KTKEFMAEM 394
D +F S LG G +GSV G+ VA+K++ + + ++F E+
Sbjct: 16 DPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREI 75
Query: 395 KILCKVHHSNLVELIG--YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
+IL +H +V+ G Y L L+ EY G L+ L + R S + Q
Sbjct: 76 QILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ 135
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVT 512
I +G+EY+ VHRD+ + NIL++S KI+DFGLAKL+ D
Sbjct: 136 IC----KGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVRE 188
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ APE L+D + + +SDV++FGVVL+E+ +
Sbjct: 189 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 139/309 (44%), Gaps = 47/309 (15%)
Query: 340 VFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIRN-------QEVAIKRMTATKTK---- 388
V+ DE + E + LG G++G VY GN R+ VA+K + + +
Sbjct: 7 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 66
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD--PQ---NRGQT 443
EF+ E ++ ++V L+G + ++ E G LKS+L P+ N G+
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 444 SLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK 503
+ +Q+A + A G+ Y++ +VHR++ + N ++ F KI DFG+ + + +
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSK 563
T D K + ++APE L DG+ T SD+++FGVVL+EI S
Sbjct: 184 T-DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------------- 228
Query: 564 NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPI 623
LA L N LK +D +D P +C ++ L + C +P
Sbjct: 229 ------LAEQPYQGLSNE------QVLKFVMDGGYLD-QPDNCPERVTDLMRMCWQFNPN 275
Query: 624 LRPDMKQVV 632
+RP ++V
Sbjct: 276 MRPTFLEIV 284
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 109/210 (51%), Gaps = 16/210 (7%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + T + E F+ E +++ K+ H LV+L +E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ ++++ EY KGSL L + L V +A A G+ Y+ + +YVHR
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLATAK 534
D+ ++NIL+ K++DFGLA+L+ D E T + + APE G T K
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKN 564
SDV++FG++L E+ + + + GMV++
Sbjct: 196 SDVWSFGILLTELTT--KGRVPYPGMVNRE 223
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 12/195 (6%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + + ++ + +A + +EY+ K +++H
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRE-CNRQEVNA--VVLLYMATQISSAMEYLE---KKNFIH 139
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 535 SDVYAFGVVLFEIIS 549
SDV+AFGV+L+EI +
Sbjct: 198 SDVWAFGVLLWEIAT 212
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 126/272 (46%), Gaps = 41/272 (15%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + T + E F+ E +++ K+ H LV+L +E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ ++++ EY KG L L + L V +A A G+ Y+ + +YVHR
Sbjct: 85 EPIYIVMEYMSKGCLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLATAK 534
D++++NIL+ K++DFGLA+L+ D E T + + APE G T K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSLKDYI 594
SDV++FG++L E+ + + + GMV++ + + + P+S+
Sbjct: 196 SDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPECPESL--------- 244
Query: 595 DPNMMDLYPHDCLFKMAMLAKQCVDEDPILRP 626
HD L QC +DP RP
Sbjct: 245 ---------HD-------LMCQCWRKDPEERP 260
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 12/195 (6%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + + ++ + +A + +EY+ K +++H
Sbjct: 82 EPPFYIITEFMTYGNLLDYLREC-NRQEVNA--VVLLYMATQISSAMEYLE---KKNFIH 135
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 193
Query: 535 SDVYAFGVVLFEIIS 549
SDV+AFGV+L+EI +
Sbjct: 194 SDVWAFGVLLWEIAT 208
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 106/195 (54%), Gaps = 14/195 (7%)
Query: 359 LGHGTYGSVYYGNI-RNQEVAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ ++ +VA+K M + + F+AE ++ + H LV+L T+
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTK 254
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ +++I E+ KGSL L + Q I + A G+ +I + +Y+HR
Sbjct: 255 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI---DFSAQIAEGMAFIEQR---NYIHR 308
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLATAK 534
D++++NIL+ ++ KI+DFGLA+++ D E T + + APE + G T K
Sbjct: 309 DLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 535 SDVYAFGVVLFEIIS 549
SDV++FG++L EI++
Sbjct: 366 SDVWSFGILLMEIVT 380
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 139/309 (44%), Gaps = 47/309 (15%)
Query: 340 VFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIRN-------QEVAIKRMTATKTK---- 388
V+ DE + E + LG G++G VY GN R+ VA+K + + +
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD--PQ---NRGQT 443
EF+ E ++ ++V L+G + ++ E G LKS+L P+ N G+
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 444 SLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK 503
+ +Q+A + A G+ Y++ +VHR++ + N ++ F KI DFG+ + + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSK 563
T D K + ++APE L DG+ T SD+++FGVVL+EI S
Sbjct: 183 T-DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------------- 227
Query: 564 NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPI 623
LA L N LK +D +D P +C ++ L + C +P
Sbjct: 228 ------LAEQPYQGLSNE------QVLKFVMDGGYLD-QPDNCPERVTDLMRMCWQFNPN 274
Query: 624 LRPDMKQVV 632
+RP ++V
Sbjct: 275 MRPTFLEIV 283
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 126/272 (46%), Gaps = 41/272 (15%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMT-ATKTKE-FMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + T + E F+ E +++ K+ H LV+L +E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ ++++ EY KG L L + L V +A A G+ Y+ + +YVHR
Sbjct: 85 EPIYIVTEYMSKGCLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLATAK 534
D++++NIL+ K++DFGLA+L+ D E T + + APE G T K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSLKDYI 594
SDV++FG++L E+ + + + GMV++ + + + P+S+
Sbjct: 196 SDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPECPESL--------- 244
Query: 595 DPNMMDLYPHDCLFKMAMLAKQCVDEDPILRP 626
HD L QC +DP RP
Sbjct: 245 ---------HD-------LMCQCWRKDPEERP 260
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 358 LLGHGTYGSVYYGNIR-----NQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVEL 408
++G G G V YG +R + VAIK + A T ++F++E I+ + H N++ L
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHL--HDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G ++ EY + GSL + L HD GQ ++ ++ + + A G+ Y+
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHD----GQFTIMQLVGMLRGVGA--GMRYL-- 167
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL 526
+ YVHRD+ + N+L+DS K+SDFGL++++ D T T + APE +
Sbjct: 168 -SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI 226
Query: 527 TDGLATAKSDVYAFGVVLFEIISGKE 552
++ SDV++FGVV++E+++ E
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLAYGE 252
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 12/195 (6%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + + ++ + +A + +EY+ K +++H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRE-CNRQEVNA--VVLLYMATQISSAMEYLE---KKNFIH 139
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 535 SDVYAFGVVLFEIIS 549
SDV+AFGV+L+EI +
Sbjct: 198 SDVWAFGVLLWEIAT 212
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 12/195 (6%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G +G VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + S ++ + +A + +EY+ K +++H
Sbjct: 79 EPPFYIITEFMTYGNLLDYLREC-NRQEVSA--VVLLYMATQISSAMEYLE---KKNFIH 132
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 535 SDVYAFGVVLFEIIS 549
SDV+AFGV+L+EI +
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 142/314 (45%), Gaps = 47/314 (14%)
Query: 340 VFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIR-------NQEVAIKRMTATKTK---- 388
V+ DE A E + S LG G++G VY G + VAIK + +
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-----PQNRGQT 443
EF+ E ++ + + ++V L+G + +I E +G LKS+L N
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 444 SLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK 503
S +Q+A + A G+ Y++ + +VHRD+ + N ++ F KI DFG+ + + +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSK 563
T D K + +++PE L DG+ T SDV++FGVVL+EI + E + +S
Sbjct: 191 T-DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSN 246
Query: 564 NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPI 623
Q R + M L + PD+ D LF+ L + C +P
Sbjct: 247 EQVLRFV---MEGGLLDKPDNCP------------------DMLFE---LMRMCWQYNPK 282
Query: 624 LRPDMKQVVISLSQ 637
+RP +++ S+ +
Sbjct: 283 MRPSFLEIISSIKE 296
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 12/195 (6%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + + ++ + +A + +EY+ K +++H
Sbjct: 83 EPPFYIITEFMTYGNLLDYLREC-NRQEVNA--VVLLYMATQISSAMEYLE---KKNFIH 136
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 194
Query: 535 SDVYAFGVVLFEIIS 549
SDV+AFGV+L+EI +
Sbjct: 195 SDVWAFGVLLWEIAT 209
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 135/309 (43%), Gaps = 55/309 (17%)
Query: 348 FATE----GFSDSSLLGHGTYGSVYYGNIR-----NQEVAIKRM----TATKTKEFMAEM 394
FA E S ++G G +G V G ++ VAIK + T + ++F+ E
Sbjct: 26 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 85
Query: 395 KILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL--HDPQNRGQTSLSWIMRVQ 452
I+ + H N++ L G + ++ EY + GSL S L HD Q + I V
Sbjct: 86 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVG 139
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVT 512
+ A G++Y+ + YVHRD+ + NIL++S K+SDFGL++++ D EA T
Sbjct: 140 MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYT 194
Query: 513 KVVGT--FGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSL 570
G + +PE + T+ SDV+++G+VL+E++S E
Sbjct: 195 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW-------------- 240
Query: 571 ASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQ 630
MS + +D P DC + L C +D RP +Q
Sbjct: 241 -------------EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 287
Query: 631 VVISLSQIL 639
+V L +++
Sbjct: 288 IVSILDKLI 296
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 142/314 (45%), Gaps = 47/314 (14%)
Query: 340 VFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIR-------NQEVAIKRMTATKTK---- 388
V+ DE A E + S LG G++G VY G + VAIK + +
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-----PQNRGQT 443
EF+ E ++ + + ++V L+G + +I E +G LKS+L N
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 444 SLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK 503
S +Q+A + A G+ Y++ + +VHRD+ + N ++ F KI DFG+ + + +
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSK 563
T D K + +++PE L DG+ T SDV++FGVVL+EI + E + +S
Sbjct: 181 T-DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSN 236
Query: 564 NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPI 623
Q R + M L + PD+ D LF+ L + C +P
Sbjct: 237 EQVLRFV---MEGGLLDKPDNCP------------------DMLFE---LMRMCWQYNPK 272
Query: 624 LRPDMKQVVISLSQ 637
+RP +++ S+ +
Sbjct: 273 MRPSFLEIISSIKE 286
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 137/304 (45%), Gaps = 45/304 (14%)
Query: 337 KPVVF----TYDEILFATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTK 388
KP V+ YD+ + LG G YG VY G + VA+K + + +
Sbjct: 199 KPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE 258
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWI 448
EF+ E ++ ++ H NLV+L+G E ++I E+ G+L +L + NR + + +
Sbjct: 259 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVNA--V 315
Query: 449 MRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGE 508
+ + +A + +EY+ K +++HR++ + N L+ K++DFGL++L+ T D
Sbjct: 316 VLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM--TGDTY 370
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERR 568
+ APE L + KSDV+AFGV+L+EI T GM
Sbjct: 371 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA--------TYGM-------- 414
Query: 569 SLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPD 627
SP + +S + + ++ + P C K+ L + C +P RP
Sbjct: 415 ------------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 462
Query: 628 MKQV 631
++
Sbjct: 463 FAEI 466
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 137/304 (45%), Gaps = 45/304 (14%)
Query: 337 KPVVF----TYDEILFATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTK 388
KP V+ YD+ + LG G YG VY G + VA+K + + +
Sbjct: 241 KPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE 300
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWI 448
EF+ E ++ ++ H NLV+L+G E ++I E+ G+L +L + NR + + +
Sbjct: 301 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNA--V 357
Query: 449 MRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGE 508
+ + +A + +EY+ K +++HR++ + N L+ K++DFGL++L+ T D
Sbjct: 358 VLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM--TGDTY 412
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERR 568
+ APE L + KSDV+AFGV+L+EI T GM
Sbjct: 413 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA--------TYGM-------- 456
Query: 569 SLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPD 627
SP + +S + + ++ + P C K+ L + C +P RP
Sbjct: 457 ------------SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 504
Query: 628 MKQV 631
++
Sbjct: 505 FAEI 508
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 12/195 (6%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + + ++ + +A + +EY+ K +++H
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRE-CNRQEVNA--VVLLYMATQISSAMEYLE---KKNFIH 138
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 196
Query: 535 SDVYAFGVVLFEIIS 549
SDV+AFGV+L+EI +
Sbjct: 197 SDVWAFGVLLWEIAT 211
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 142/310 (45%), Gaps = 47/310 (15%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIR-------NQEVAIKRMTATKTK----EFMA 392
DE A E + S LG G++G VY G + VAIK + + EF+
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 393 EMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSL---SW 447
E ++ + + ++V L+G + +I E +G LKS+L P+ L S
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 448 IMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDG 507
+Q+A + A G+ Y++ + +VHRD+ + N ++ F KI DFG+ + + +T D
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DY 180
Query: 508 EATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQER 567
K + +++PE L DG+ T SDV++FGVVL+EI + E + +S Q
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVL 237
Query: 568 RSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPD 627
R + M L + PD+ D LF+ L + C +P +RP
Sbjct: 238 RFV---MEGGLLDKPDNCP------------------DMLFE---LMRMCWQYNPKMRPS 273
Query: 628 MKQVVISLSQ 637
+++ S+ +
Sbjct: 274 FLEIISSIKE 283
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 140/295 (47%), Gaps = 49/295 (16%)
Query: 358 LLGHGTYGSVYYGNI-----RNQEVAIKRM----TATKTKEFMAEMKILCKVHHSNLVEL 408
++G G +G V G++ R VAIK + T + ++F++E I+ + H N++ L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
G + +I E+ + GSL S L QN GQ ++ I V + A G++Y+ +
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLR--QNDGQFTV--IQLVGMLRGIAAGMKYLAD-- 127
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVG---TFGYLAPE 524
+YVHR + + NIL++S K+SDFGL++ L TSD T T +G + APE
Sbjct: 128 -MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSD--PTYTSALGGKIPIRWTAPE 184
Query: 525 YLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDS 584
+ T+ SDV+++G+V++E++S E R + N+ +
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGE---------------RPYWDMTNQDVINAIE- 228
Query: 585 MSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQIL 639
+DY P P DC + L C +D RP Q+V +L +++
Sbjct: 229 ------QDYRLPP-----PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 272
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 41/278 (14%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + + ++ + +A + +EY+ K +++H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLREC-NRQEVNA--VVLLYMATQISSAMEYLE---KKNFIH 134
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDY 593
SDV+AFGV+L+EI T GM SP + +S + +
Sbjct: 193 SDVWAFGVLLWEIA--------TYGM--------------------SPYPGIDLSQVYEL 224
Query: 594 IDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQV 631
++ + P C K+ L + C +P RP ++
Sbjct: 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 41/278 (14%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + + ++ + +A + +EY+ K +++H
Sbjct: 81 EPPFYIITEFMTYGNLLDYLREC-NRQEVNA--VVLLYMATQISSAMEYLE---KKNFIH 134
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDY 593
SDV+AFGV+L+EI T GM SP + +S + +
Sbjct: 193 SDVWAFGVLLWEIA--------TYGM--------------------SPYPGIDLSQVYEL 224
Query: 594 IDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQV 631
++ + P C K+ L + C +P RP ++
Sbjct: 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 41/278 (14%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + + ++ + +A + +EY+ K +++H
Sbjct: 86 EPPFYIITEFMTYGNLLDYLREC-NRQEVNA--VVLLYMATQISSAMEYLE---KKNFIH 139
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDY 593
SDV+AFGV+L+EI T GM SP + +S + +
Sbjct: 198 SDVWAFGVLLWEIA--------TYGM--------------------SPYPGIDLSQVYEL 229
Query: 594 IDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQV 631
++ + P C K+ L + C +P RP ++
Sbjct: 230 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 47/290 (16%)
Query: 359 LGHGTYGSVYYGNIRN-------QEVAIKRMTATKTK----EFMAEMKILCKVHHSNLVE 407
LG G++G VY GN R+ VA+K + + + EF+ E ++ ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHD--PQ---NRGQTSLSWIMRVQIALDAARGLE 462
L+G + ++ E G LKS+L P+ N G+ + +Q+A + A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y++ +VHRD+ + N ++ F KI DFG+ + + +T D K + ++A
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET-DYYRKGGKGLLPVRWMA 199
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSP 582
PE L DG+ T SD+++FGVVL+EI S LA L N
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITS--------------------LAEQPYQGLSNE- 238
Query: 583 DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVV 632
LK +D +D P +C ++ L + C +P +RP ++V
Sbjct: 239 -----QVLKFVMDGGYLD-QPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 282
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 131/295 (44%), Gaps = 51/295 (17%)
Query: 358 LLGHGTYGSVYYGNIR-----NQEVAIKRM----TATKTKEFMAEMKILCKVHHSNLVEL 408
++G G +G V G ++ VAIK + T + ++F+ E I+ + H N++ L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHL--HDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G + ++ EY + GSL S L HD Q + I V + A G++Y+ +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGMLRGIASGMKYLSD 165
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT--FGYLAPE 524
YVHRD+ + NIL++S K+SDFGL++++ D EA T G + +PE
Sbjct: 166 ---MGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 525 YLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDS 584
+ T+ SDV+++G+VL+E++S E
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---------------------------E 253
Query: 585 MSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQIL 639
MS + +D P DC + L C +D RP +Q+V L +++
Sbjct: 254 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 130/295 (44%), Gaps = 51/295 (17%)
Query: 358 LLGHGTYGSVYYGNIR-----NQEVAIKRM----TATKTKEFMAEMKILCKVHHSNLVEL 408
++G G +G V G ++ VAIK + T + ++F+ E I+ + H N++ L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHL--HDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G + ++ EY + GSL S L HD Q + I V + A G++Y+ +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGMLRGIASGMKYLSD 165
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT--FGYLAPE 524
YVHRD+ + NIL++S K+SDFGL +++ D EA T G + +PE
Sbjct: 166 ---MGYVHRDLAARNILINSNLVCKVSDFGLGRVL--EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 525 YLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDS 584
+ T+ SDV+++G+VL+E++S E
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---------------------------E 253
Query: 585 MSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQIL 639
MS + +D P DC + L C +D RP +Q+V L +++
Sbjct: 254 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 135/309 (43%), Gaps = 55/309 (17%)
Query: 348 FATE----GFSDSSLLGHGTYGSVYYGNIR-----NQEVAIKRM----TATKTKEFMAEM 394
FA E S ++G G +G V G ++ VAIK + T + ++F+ E
Sbjct: 9 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 395 KILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL--HDPQNRGQTSLSWIMRVQ 452
I+ + H N++ L G + ++ EY + GSL S L HD Q + I V
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVG 122
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVT 512
+ A G++Y+ + YVHRD+ + NIL++S K+SDFGL++++ D EA T
Sbjct: 123 MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYT 177
Query: 513 KVVGT--FGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSL 570
G + +PE + T+ SDV+++G+VL+E++S E
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW-------------- 223
Query: 571 ASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQ 630
MS + +D P DC + L C +D RP +Q
Sbjct: 224 -------------EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 270
Query: 631 VVISLSQIL 639
+V L +++
Sbjct: 271 IVSILDKLI 279
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 135/309 (43%), Gaps = 55/309 (17%)
Query: 348 FATE----GFSDSSLLGHGTYGSVYYGNIR-----NQEVAIKRM----TATKTKEFMAEM 394
FA E S ++G G +G V G ++ VAIK + T + ++F+ E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 395 KILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL--HDPQNRGQTSLSWIMRVQ 452
I+ + H N++ L G + ++ EY + GSL S L HD Q + I V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVG 151
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVT 512
+ A G++Y+ + YVHRD+ + NIL++S K+SDFGL++++ D EA T
Sbjct: 152 MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYT 206
Query: 513 KVVGT--FGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSL 570
G + +PE + T+ SDV+++G+VL+E++S E
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW-------------- 252
Query: 571 ASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQ 630
MS + +D P DC + L C +D RP +Q
Sbjct: 253 -------------EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 631 VVISLSQIL 639
+V L +++
Sbjct: 300 IVSILDKLI 308
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 131/295 (44%), Gaps = 51/295 (17%)
Query: 358 LLGHGTYGSVYYGNIR-----NQEVAIKRM----TATKTKEFMAEMKILCKVHHSNLVEL 408
++G G +G V G ++ VAIK + T + ++F+ E I+ + H N++ L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHL--HDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G + ++ EY + GSL S L HD Q + I V + A G++Y+ +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGMLRGIASGMKYLSD 165
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT--FGYLAPE 524
YVHRD+ + NIL++S K+SDFGL++++ D EA T G + +PE
Sbjct: 166 ---MGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 525 YLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDS 584
+ T+ SDV+++G+VL+E++S E
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---------------------------E 253
Query: 585 MSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQIL 639
MS + +D P DC + L C +D RP +Q+V L +++
Sbjct: 254 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 131/295 (44%), Gaps = 51/295 (17%)
Query: 358 LLGHGTYGSVYYGNIR-----NQEVAIKRM----TATKTKEFMAEMKILCKVHHSNLVEL 408
++G G +G V G ++ VAIK + T + ++F+ E I+ + H N++ L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHL--HDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G + ++ EY + GSL S L HD Q + I V + A G++Y+ +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGMLRGIASGMKYLSD 165
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT--FGYLAPE 524
YVHRD+ + NIL++S K+SDFGL++++ D EA T G + +PE
Sbjct: 166 ---MGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 525 YLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDS 584
+ T+ SDV+++G+VL+E++S E
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---------------------------E 253
Query: 585 MSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQIL 639
MS + +D P DC + L C +D RP +Q+V L +++
Sbjct: 254 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 41/272 (15%)
Query: 359 LGHGTYGSVYYGNIR-NQEVAIKRMTA--TKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ G VAIK + + F+ E +++ K+ H LV+L +E
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 251
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ ++++ EY KGSL L + L V +A A G+ Y+ + +YVHR
Sbjct: 252 EPIYIVTEYMSKGSLLDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVE---RMNYVHR 305
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG-TFGYLAPEYLTDGLATAK 534
D++++NIL+ K++DFGL +L+ D E T + + APE G T K
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSLKDYI 594
SDV++FG++L E+ + + + GMV++ + + + P+S+
Sbjct: 363 SDVWSFGILLTELTT--KGRVPYPGMVNREVLDQVERGYRMPCPPECPESL--------- 411
Query: 595 DPNMMDLYPHDCLFKMAMLAKQCVDEDPILRP 626
HD L QC +DP RP
Sbjct: 412 ---------HD-------LMCQCWRKDPEERP 427
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 135/309 (43%), Gaps = 55/309 (17%)
Query: 348 FATE----GFSDSSLLGHGTYGSVYYGNIR-----NQEVAIKRM----TATKTKEFMAEM 394
FA E S ++G G +G V G ++ VAIK + T + ++F+ E
Sbjct: 36 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 95
Query: 395 KILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL--HDPQNRGQTSLSWIMRVQ 452
I+ + H N++ L G + ++ EY + GSL S L HD Q + I V
Sbjct: 96 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVG 149
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVT 512
+ A G++Y+ + YVHRD+ + NIL++S K+SDFGL++++ D EA T
Sbjct: 150 MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYT 204
Query: 513 KVVGT--FGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSL 570
G + +PE + T+ SDV+++G+VL+E++S E
Sbjct: 205 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW-------------- 250
Query: 571 ASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQ 630
MS + +D P DC + L C +D RP +Q
Sbjct: 251 -------------EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 297
Query: 631 VVISLSQIL 639
+V L +++
Sbjct: 298 IVSILDKLI 306
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 141/314 (44%), Gaps = 47/314 (14%)
Query: 340 VFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIR-------NQEVAIKRMTATKTK---- 388
V+ DE A E + S LG G++G VY G + VAIK + +
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD--PQNRGQTSL- 445
EF+ E ++ + + ++V L+G + +I E +G LKS+L P+ L
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 446 --SWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK 503
S +Q+A + A G+ Y++ + +VHRD+ + N + F KI DFG+ + + +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSK 563
T D K + +++PE L DG+ T SDV++FGVVL+EI
Sbjct: 178 T-DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA--------------- 221
Query: 564 NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPI 623
+LA L N L+ ++ ++D P +C + L + C +P
Sbjct: 222 -----TLAEQPYQGLSNE------QVLRFVMEGGLLD-KPDNCPDMLLELMRMCWQYNPK 269
Query: 624 LRPDMKQVVISLSQ 637
+RP +++ S+ +
Sbjct: 270 MRPSFLEIISSIKE 283
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 12/195 (6%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + + ++ + +A + +EY+ K +++H
Sbjct: 83 EPPFYIITEFMTYGNLLDYLREC-NRQEVNA--VVLLYMATQISSAMEYLE---KKNFIH 136
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 535 SDVYAFGVVLFEIIS 549
SDV+AFGV+L+EI +
Sbjct: 195 SDVWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 12/195 (6%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + + ++ + +A + +EY+ K +++H
Sbjct: 94 EPPFYIITEFMTYGNLLDYLREC-NRQEVNA--VVLLYMATQISSAMEYLE---KKNFIH 147
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 205
Query: 535 SDVYAFGVVLFEIIS 549
SDV+AFGV+L+EI +
Sbjct: 206 SDVWAFGVLLWEIAT 220
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 41/278 (14%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAAT 414
LG G YG VY G + VA+K + + +EF+ E ++ ++ H NLV+L+G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
E ++I E+ G+L +L + NR + + ++ + +A + +EY+ K +++H
Sbjct: 83 EPPFYIITEFMTYGNLLDYLREC-NRQEVNA--VVLLYMATQISSAMEYLE---KKNFIH 136
Query: 475 RDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
RD+ + N L+ K++DFGL++L+ T D + APE L + K
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDY 593
SDV+AFGV+L+EI T GM SP + +S + +
Sbjct: 195 SDVWAFGVLLWEIA--------TYGM--------------------SPYPGIDLSQVYEL 226
Query: 594 IDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQV 631
++ + P C K+ L + C +P RP ++
Sbjct: 227 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 131/295 (44%), Gaps = 51/295 (17%)
Query: 358 LLGHGTYGSVYYGNIR-----NQEVAIKRM----TATKTKEFMAEMKILCKVHHSNLVEL 408
++G G +G V G ++ VAIK + T + ++F+ E I+ + H N++ L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHL--HDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G + ++ EY + GSL S L HD Q + I V + A G++Y+ +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGMLRGIASGMKYLSD 165
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT--FGYLAPE 524
+VHRD+ + NIL++S K+SDFGL++++ D EA T G + +PE
Sbjct: 166 ---MGFVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 525 YLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDS 584
+ T+ SDV+++G+VL+E++S E
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---------------------------E 253
Query: 585 MSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQIL 639
MS + +D P DC + L C +D RP +Q+V L +++
Sbjct: 254 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 32/222 (14%)
Query: 353 FSDSSLLGHGTYGSVYYG-NIRNQEV-AIKRMTAT------KTKEFMAEMKILCKVHHSN 404
FSD +GHG++G+VY+ ++RN EV AIK+M+ + K ++ + E++ L K+ H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 405 LVELIGYAATEDELFLIYEYAQKGS---LKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
++ G E +L+ EY + L+ H + L + + A +GL
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVH--------KKPLQEVEIAAVTHGALQGL 167
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
Y+H H +HRD+K+ NILL K+ DFG A ++ A VGT ++
Sbjct: 168 AYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM-------APANXFVGTPYWM 217
Query: 522 APEY---LTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGM 560
APE + +G K DV++ G+ E+ K + M
Sbjct: 218 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 259
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 120/241 (49%), Gaps = 25/241 (10%)
Query: 314 TGEVSNPPITIPKALGTDVFDMEKPVVFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIR 373
T ++ NPP K L D + VF E LG G+YGSVY +
Sbjct: 4 TVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLE------------KLGEGSYGSVYKAIHK 51
Query: 374 N--QEVAIKRM-TATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSL 430
Q VAIK++ + +E + E+ I+ + ++V+ G +L+++ EY GS+
Sbjct: 52 ETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111
Query: 431 KSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRA 490
S + +N+ T +Q L +GLEY+H K +HRDIK+ NILL++ A
Sbjct: 112 -SDIIRLRNKTLTEDEIATILQSTL---KGLEYLHFMRK---IHRDIKAGNILLNTEGHA 164
Query: 491 KISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
K++DFG+A G+ +D A V+GT ++APE + + +D+++ G+ E+ G
Sbjct: 165 KLADFGVA---GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEG 221
Query: 551 K 551
K
Sbjct: 222 K 222
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 32/222 (14%)
Query: 353 FSDSSLLGHGTYGSVYYG-NIRNQEV-AIKRMTAT------KTKEFMAEMKILCKVHHSN 404
FSD +GHG++G+VY+ ++RN EV AIK+M+ + K ++ + E++ L K+ H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 405 LVELIGYAATEDELFLIYEYAQKGS---LKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
++ G E +L+ EY + L+ H + L + + A +GL
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVH--------KKPLQEVEIAAVTHGALQGL 128
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
Y+H H +HRD+K+ NILL K+ DFG A ++ A VGT ++
Sbjct: 129 AYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM-------APANXFVGTPYWM 178
Query: 522 APEY---LTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGM 560
APE + +G K DV++ G+ E+ K + M
Sbjct: 179 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 220
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 110/203 (54%), Gaps = 20/203 (9%)
Query: 358 LLGHGTYGSVYYGNI-----RNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVEL 408
++G G +G V G + R VAIK + A T ++F++E I+ + H N++ L
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
G + +I EY + GSL + L +N G+ ++ I V + G++Y+ + +
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRFTV--IQLVGMLRGIGSGMKYLSDMS 130
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT--FGYLAPEYL 526
YVHRD+ + NIL++S K+SDFG+++++ D EA T G + APE +
Sbjct: 131 ---YVHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEAAYTTRGGKIPIRWTAPEAI 185
Query: 527 TDGLATAKSDVYAFGVVLFEIIS 549
T+ SDV+++G+V++E++S
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMS 208
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 22/194 (11%)
Query: 359 LGHGTYGSVYYGNI-RNQEVAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V+ ++ +VA+K M + + F+AE ++ + H LV+L T+
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTK 248
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ +++I E+ KGSL L + Q I + A G+ +I + +Y+HR
Sbjct: 249 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI---DFSAQIAEGMAFIEQR---NYIHR 302
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS 535
D++++NIL+ ++ KI+DFGLA++ K + APE + G T KS
Sbjct: 303 DLRAANILVSASLVCKIADFGLARVGAKFP------------IKWTAPEAINFGSFTIKS 350
Query: 536 DVYAFGVVLFEIIS 549
DV++FG++L EI++
Sbjct: 351 DVWSFGILLMEIVT 364
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 110/203 (54%), Gaps = 20/203 (9%)
Query: 358 LLGHGTYGSVYYGNI-----RNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVEL 408
++G G +G V G + R VAIK + A T ++F++E I+ + H N++ L
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
G + +I EY + GSL + L +N G+ ++ I V + G++Y+ + +
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRFTV--IQLVGMLRGIGSGMKYLSDMS 136
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT--FGYLAPEYL 526
YVHRD+ + NIL++S K+SDFG+++++ D EA T G + APE +
Sbjct: 137 ---YVHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEAAYTTRGGKIPIRWTAPEAI 191
Query: 527 TDGLATAKSDVYAFGVVLFEIIS 549
T+ SDV+++G+V++E++S
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 55/309 (17%)
Query: 348 FATE----GFSDSSLLGHGTYGSVYYGNIR-----NQEVAIKRM----TATKTKEFMAEM 394
FA E S ++G G +G V G ++ VAIK + T + ++F+ E
Sbjct: 9 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 395 KILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL--HDPQNRGQTSLSWIMRVQ 452
I+ + H N++ L G + ++ E + GSL S L HD Q + I V
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ------FTVIQLVG 122
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVT 512
+ A G++Y+ + YVHRD+ + NIL++S K+SDFGL++++ D EA T
Sbjct: 123 MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYT 177
Query: 513 KVVGT--FGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSL 570
G + +PE + T+ SDV+++G+VL+E++S E
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW-------------- 223
Query: 571 ASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQ 630
MS + +D P DC + L C +D RP +Q
Sbjct: 224 -------------EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 270
Query: 631 VVISLSQIL 639
+V L +++
Sbjct: 271 IVSILDKLI 279
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 70/324 (21%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNI------RNQE---VAIKRMTATKTKE----FMAEM 394
F + + LG G +G V + +E VA+K + T+E ++EM
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEM 91
Query: 395 KILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQ 442
+++ + H N++ L+G + L++I EYA KG+L+ +L +D +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 443 TSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG 502
+++ V ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 503 ------KTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIR 556
KT++G V ++APE L D + T +SDV++FGV+++EI +
Sbjct: 209 NIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFT------- 254
Query: 557 TEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAK 615
L SP + + L + P +C ++ M+ +
Sbjct: 255 ---------------------LGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 616 QCVDEDPILRPDMKQVVISLSQIL 639
C P RP KQ+V L +IL
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 55/309 (17%)
Query: 348 FATE----GFSDSSLLGHGTYGSVYYGNIR-----NQEVAIKRM----TATKTKEFMAEM 394
FA E S ++G G +G V G ++ VAIK + T + ++F+ E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 395 KILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL--HDPQNRGQTSLSWIMRVQ 452
I+ + H N++ L G + ++ E + GSL S L HD Q + I V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ------FTVIQLVG 151
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVT 512
+ A G++Y+ + YVHRD+ + NIL++S K+SDFGL++++ D EA T
Sbjct: 152 MLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYT 206
Query: 513 KVVGT--FGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSL 570
G + +PE + T+ SDV+++G+VL+E++S E
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW-------------- 252
Query: 571 ASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQ 630
MS + +D P DC + L C +D RP +Q
Sbjct: 253 -------------EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 631 VVISLSQIL 639
+V L +++
Sbjct: 300 IVSILDKLI 308
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 20/203 (9%)
Query: 358 LLGHGTYGSVYYGNI-----RNQEVAIKRM----TATKTKEFMAEMKILCKVHHSNLVEL 408
++G G +G V G + R+ VAIK + T + ++F+ E I+ + H N+V L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
G + ++ E+ + G+L + L ++ GQ ++ I V + A G+ Y+ +
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLR--KHDGQFTV--IQLVGMLRGIAAGMRYLAD-- 163
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF--GYLAPEYL 526
YVHRD+ + NIL++S K+SDFGL++++ D EA T G + APE +
Sbjct: 164 -MGYVHRDLAARNILVNSNLVCKVSDFGLSRVI--EDDPEAVYTTTGGKIPVRWTAPEAI 220
Query: 527 TDGLATAKSDVYAFGVVLFEIIS 549
T+ SDV+++G+V++E++S
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 70/324 (21%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNI------RNQE---VAIKRMTATKTK----EFMAEM 394
F + + LG G +G V + +E VA+K + T+ + ++EM
Sbjct: 78 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 137
Query: 395 KILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQ 442
+++ + H N++ L+G + L++I EYA KG+L+ +L +D +
Sbjct: 138 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 197
Query: 443 TSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG 502
+++ V ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ +
Sbjct: 198 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDIN 254
Query: 503 ------KTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIR 556
KT++G V ++APE L D + T +SDV++FGV+++EI +
Sbjct: 255 NIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFT------- 300
Query: 557 TEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAK 615
L SP + + L + P +C ++ M+ +
Sbjct: 301 ---------------------LGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 339
Query: 616 QCVDEDPILRPDMKQVVISLSQIL 639
C P RP KQ+V L +IL
Sbjct: 340 DCWHAVPSQRPTFKQLVEDLDRIL 363
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 70/324 (21%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNI------RNQE---VAIKRMTATKTK----EFMAEM 394
F + + LG G +G V + +E VA+K + T+ + ++EM
Sbjct: 21 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 80
Query: 395 KILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQ 442
+++ + H N++ L+G + L++I EYA KG+L+ +L +D +
Sbjct: 81 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 140
Query: 443 TSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG 502
+++ V ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ +
Sbjct: 141 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 197
Query: 503 ------KTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIR 556
KT++G V ++APE L D + T +SDV++FGV+++EI +
Sbjct: 198 NIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFT------- 243
Query: 557 TEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAK 615
L SP + + L + P +C ++ M+ +
Sbjct: 244 ---------------------LGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 282
Query: 616 QCVDEDPILRPDMKQVVISLSQIL 639
C P RP KQ+V L +IL
Sbjct: 283 DCWHAVPSQRPTFKQLVEDLDRIL 306
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 70/324 (21%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNI------RNQE---VAIKRMTATKTK----EFMAEM 394
F + + LG G +G V + +E VA+K + T+ + ++EM
Sbjct: 19 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 78
Query: 395 KILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQ 442
+++ + H N++ L+G + L++I EYA KG+L+ +L +D +
Sbjct: 79 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 138
Query: 443 TSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG 502
+++ V ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ +
Sbjct: 139 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDIN 195
Query: 503 ------KTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIR 556
KT++G V ++APE L D + T +SDV++FGV+++EI +
Sbjct: 196 NIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFT------- 241
Query: 557 TEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAK 615
L SP + + L + P +C ++ M+ +
Sbjct: 242 ---------------------LGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 280
Query: 616 QCVDEDPILRPDMKQVVISLSQIL 639
C P RP KQ+V L +IL
Sbjct: 281 DCWHAVPSQRPTFKQLVEDLDRIL 304
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 70/324 (21%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNI------RNQE---VAIKRMTATKTK----EFMAEM 394
F + + LG G +G V + +E VA+K + T+ + ++EM
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 395 KILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQ 442
+++ + H N++ L+G + L++I EYA KG+L+ +L +D +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 443 TSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG 502
+++ V ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 503 ------KTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIR 556
KT++G V ++APE L D + T +SDV++FGV+++EI +
Sbjct: 209 NIDXXKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFT------- 254
Query: 557 TEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAK 615
L SP + + L + P +C ++ M+ +
Sbjct: 255 ---------------------LGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 616 QCVDEDPILRPDMKQVVISLSQIL 639
C P RP KQ+V L +IL
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 70/324 (21%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNI------RNQE---VAIKRMTATKTK----EFMAEM 394
F + + LG G +G V + +E VA+K + T+ + ++EM
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 395 KILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQ 442
+++ + H N++ L+G + L++I EYA KG+L+ +L +D +
Sbjct: 92 EMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 443 TSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG 502
+++ V ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 503 ------KTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIR 556
KT++G V ++APE L D + T +SDV++FGV+++EI +
Sbjct: 209 NIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFT------- 254
Query: 557 TEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAK 615
L SP + + L + P +C ++ M+ +
Sbjct: 255 ---------------------LGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 616 QCVDEDPILRPDMKQVVISLSQIL 639
C P RP KQ+V L +IL
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 70/324 (21%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNI------RNQE---VAIKRMTATKTK----EFMAEM 394
F + + LG G +G V + +E VA+K + T+ + ++EM
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 395 KILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQ 442
+++ + H N++ L+G + L++I EYA KG+L+ +L +D +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPE 151
Query: 443 TSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG 502
+++ V ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 503 ------KTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIR 556
KT++G V ++APE L D + T +SDV++FGV+++EI +
Sbjct: 209 NIDXXKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFT------- 254
Query: 557 TEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAK 615
L SP + + L + P +C ++ M+ +
Sbjct: 255 ---------------------LGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 616 QCVDEDPILRPDMKQVVISLSQIL 639
C P RP KQ+V L +IL
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 70/324 (21%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNI------RNQE---VAIKRMTATKTK----EFMAEM 394
F + + LG G +G V + +E VA+K + T+ + ++EM
Sbjct: 24 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 83
Query: 395 KILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQ 442
+++ + H N++ L+G + L++I EYA KG+L+ +L +D +
Sbjct: 84 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 143
Query: 443 TSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG 502
+++ V ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ +
Sbjct: 144 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 200
Query: 503 ------KTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIR 556
KT++G V ++APE L D + T +SDV++FGV+++EI +
Sbjct: 201 NIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFT------- 246
Query: 557 TEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAK 615
L SP + + L + P +C ++ M+ +
Sbjct: 247 ---------------------LGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 285
Query: 616 QCVDEDPILRPDMKQVVISLSQIL 639
C P RP KQ+V L +IL
Sbjct: 286 DCWHAVPSQRPTFKQLVEDLDRIL 309
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 33/218 (15%)
Query: 357 SLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKI--LCKVHHSNLVELI--GYA 412
L+G G YG+VY G++ + VA+K + + F+ E I + + H N+ I
Sbjct: 19 ELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDER 78
Query: 413 ATED---ELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH---- 465
T D E L+ EY GSL +L + W+ ++A RGL Y+H
Sbjct: 79 VTADGRMEYLLVMEYYPNGSLXKYL------SLHTSDWVSSCRLAHSVTRGLAYLHTELP 132
Query: 466 --EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLA------KLVGKTSDGEATVTKVVGT 517
+H K HRD+ S N+L+ + ISDFGL+ +LV + A +++ VGT
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE-VGT 191
Query: 518 FGYLAPEYLTDGL-------ATAKSDVYAFGVVLFEII 548
Y+APE L + A + D+YA G++ +EI
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 362 GTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKI--LCKVHHSNLVELIGY----AATE 415
G +G V+ + N+ VA+K + + E ++ L + H N+++ IG + +
Sbjct: 35 GRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVD 94
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHT------- 468
+L+LI + +KGSL L +SW IA ARGL Y+HE
Sbjct: 95 VDLWLITAFHEKGSLSDFLK------ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLA-KLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
K HRDIKS N+LL + A I+DFGLA K S G+ VGT Y+APE L
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ--VGTRRYMAPEVLE 206
Query: 528 DGL-----ATAKSDVYAFGVVLFEIIS 549
+ A + D+YA G+VL+E+ S
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 70/324 (21%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNI------RNQE---VAIKRMTATKTK----EFMAEM 394
F + + LG G +G V + +E VA+K + T+ + ++EM
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 395 KILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQ 442
+++ + H N++ L+G + L++I EYA KG+L+ +L +D +
Sbjct: 92 EMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 443 TSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG 502
+++ V ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 503 ------KTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIR 556
KT++G V ++APE L D + T +SDV++FGV+++EI +
Sbjct: 209 NIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFT------- 254
Query: 557 TEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAK 615
L SP + + L + P +C ++ M+ +
Sbjct: 255 ---------------------LGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 616 QCVDEDPILRPDMKQVVISLSQIL 639
C P RP KQ+V L +IL
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 141/324 (43%), Gaps = 70/324 (21%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNI------RNQE---VAIKRMTATKTK----EFMAEM 394
F + + LG G +G V + +E VA+K + T+ + ++EM
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 395 KILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQ 442
+++ + H N++ L+G + L++I EYA KG+L+ +L +D +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 443 TSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG 502
+++ V ARG+EY+ +HRD+ + N+L+ +I+DFGLA+ +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDIN 208
Query: 503 ------KTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIR 556
KT++G V ++APE L D + T +SDV++FGV+++EI +
Sbjct: 209 NIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFT------- 254
Query: 557 TEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAK 615
L SP + + L + P +C ++ M+ +
Sbjct: 255 ---------------------LGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 616 QCVDEDPILRPDMKQVVISLSQIL 639
C P RP KQ+V L +IL
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 20/203 (9%)
Query: 358 LLGHGTYGSVYYGNI-----RNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVEL 408
++G G +G V G + R VAIK + A T ++F++E I+ + H N++ L
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 95
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
G + +I EY + GSL + L +N G+ ++ I V + G++Y+ + +
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRFTV--IQLVGMLRGIGSGMKYLSDMS 151
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT--FGYLAPEYL 526
VHRD+ + NIL++S K+SDFG+++++ D EA T G + APE +
Sbjct: 152 A---VHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEAAYTTRGGKIPIRWTAPEAI 206
Query: 527 TDGLATAKSDVYAFGVVLFEIIS 549
T+ SDV+++G+V++E++S
Sbjct: 207 AYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 126/258 (48%), Gaps = 45/258 (17%)
Query: 325 PKALGTDVFD-MEKPVVFTYDEILFATEGFSDSSLLGHGTYGSV-------YYGNIRNQE 376
P +L D F +E P + F + LG G +G V G
Sbjct: 2 PLSLSVDAFKILEDP------KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTT 55
Query: 377 VAIKRM----TATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKS 432
VA+K + + ++ ++ ++E +L +V+H ++++L G + + L LI EYA+ GSL+
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 433 HLHDPQNRG-------------------QTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
L + + G + +L+ + A ++G++Y+ E + V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS---LV 172
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF--GYLAPEYLTDGLA 531
HRD+ + NIL+ + KISDFGL++ V + ++ V + G ++A E L D +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDV---YEEDSXVKRSQGRIPVKWMAIESLFDHIY 229
Query: 532 TAKSDVYAFGVVLFEIIS 549
T +SDV++FGV+L+EI++
Sbjct: 230 TTQSDVWSFGVLLWEIVT 247
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIR--NQEVAIKRMTAT-----KTKEFMAEMKI 396
D+ + E +G G +G V+ G +R N VA+K T K K F+ E +I
Sbjct: 107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-FLQEARI 165
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD 456
L + H N+V LIG + ++++ E Q G + L R + +Q+ D
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK----TLLQMVGD 221
Query: 457 AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG 516
AA G+EY+ +HRD+ + N L+ KISDFG+++ + +DG + +
Sbjct: 222 AAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR---EEADGVXAASGGLR 275
Query: 517 T--FGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ APE L G +++SDV++FG++L+E S
Sbjct: 276 QVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 103/194 (53%), Gaps = 12/194 (6%)
Query: 359 LGHGTYGSVYYGNIRNQE-VAIK--RMTATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
+G G +G V+ G N++ VAIK R A ++F+ E +++ K+ H LV+L G +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ L++E+ + G L +L RG + ++ + LD G+ Y+ E + +HR
Sbjct: 75 APICLVFEFMEHGCLSDYLR--TQRGLFAAETLL--GMCLDVCEGMAYLEEAS---VIHR 127
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS 535
D+ + N L+ K+SDFG+ + V +T TK + +PE + ++KS
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSKS 185
Query: 536 DVYAFGVVLFEIIS 549
DV++FGV+++E+ S
Sbjct: 186 DVWSFGVLMWEVFS 199
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 125/258 (48%), Gaps = 45/258 (17%)
Query: 325 PKALGTDVFD-MEKPVVFTYDEILFATEGFSDSSLLGHGTYGSV-------YYGNIRNQE 376
P +L D F +E P + F + LG G +G V G
Sbjct: 2 PLSLSVDAFKILEDP------KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTT 55
Query: 377 VAIKRM----TATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKS 432
VA+K + + ++ ++ ++E +L +V+H ++++L G + + L LI EYA+ GSL+
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 433 HLHDPQNRG-------------------QTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
L + + G + +L+ + A ++G++Y+ E V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLV 172
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF--GYLAPEYLTDGLA 531
HRD+ + NIL+ + KISDFGL++ V + ++ V + G ++A E L D +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDV---YEEDSXVKRSQGRIPVKWMAIESLFDHIY 229
Query: 532 TAKSDVYAFGVVLFEIIS 549
T +SDV++FGV+L+EI++
Sbjct: 230 TTQSDVWSFGVLLWEIVT 247
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 359 LGHGTYGSVYYGNIRNQE-VAIK--RMTATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
+G G +G V+ G N++ VAIK R A ++F+ E +++ K+ H LV+L G +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ L++E+ + G L +L RG + ++ + LD G+ Y+ E +HR
Sbjct: 75 APICLVFEFMEHGCLSDYLR--TQRGLFAAETLL--GMCLDVCEGMAYLEEAC---VIHR 127
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS 535
D+ + N L+ K+SDFG+ + V +T TK + +PE + ++KS
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSKS 185
Query: 536 DVYAFGVVLFEIIS 549
DV++FGV+++E+ S
Sbjct: 186 DVWSFGVLMWEVFS 199
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 359 LGHGTYGSVYYGNIRNQE-VAIK--RMTATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
+G G +G V+ G N++ VAIK R A ++F+ E +++ K+ H LV+L G +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ L++E+ + G L +L RG + ++ + LD G+ Y+ E +HR
Sbjct: 73 APICLVFEFMEHGCLSDYLR--TQRGLFAAETLL--GMCLDVCEGMAYLEEAC---VIHR 125
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS 535
D+ + N L+ K+SDFG+ + V +T TK + +PE + ++KS
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSKS 183
Query: 536 DVYAFGVVLFEIIS 549
DV++FGV+++E+ S
Sbjct: 184 DVWSFGVLMWEVFS 197
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 359 LGHGTYGSVYYGNIRNQE-VAIK--RMTATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
+G G +G V+ G N++ VAIK R A ++F+ E +++ K+ H LV+L G +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ L++E+ + G L +L RG + ++ + LD G+ Y+ E +HR
Sbjct: 78 APICLVFEFMEHGCLSDYLR--TQRGLFAAETLL--GMCLDVCEGMAYLEEAC---VIHR 130
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS 535
D+ + N L+ K+SDFG+ + V +T TK + +PE + ++KS
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSKS 188
Query: 536 DVYAFGVVLFEIIS 549
DV++FGV+++E+ S
Sbjct: 189 DVWSFGVLMWEVFS 202
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 118/257 (45%), Gaps = 27/257 (10%)
Query: 353 FSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTK----------EFMA--EMKILCKV 400
F +LG G +G V +R A +M A K E MA E +IL KV
Sbjct: 186 FRQYRVLGKGGFGEVCACQVR----ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
+ +V L T+D L L+ G LK H++ + GQ V A + G
Sbjct: 242 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY---HMGQAGFPEARAVFYAAEICCG 298
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGY 520
LE +H + V+RD+K NILLD +ISD GLA V +G+ T+ VGT GY
Sbjct: 299 LEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHV---PEGQ-TIKGRVGTVGY 351
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLA-ALR 579
+APE + + T D +A G +L+E+I+G+ + + + + + R + + R
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSER 411
Query: 580 NSPDSMSMSSLKDYIDP 596
SP + S+ S DP
Sbjct: 412 FSPQARSLCSQLLCKDP 428
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIR--NQEVAIKRMTAT-----KTKEFMAEMKI 396
D+ + E +G G +G V+ G +R N VA+K T K K F+ E +I
Sbjct: 107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-FLQEARI 165
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD 456
L + H N+V LIG + ++++ E Q G + L R + +Q+ D
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK----TLLQMVGD 221
Query: 457 AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG 516
AA G+EY+ +HRD+ + N L+ KISDFG+++ + +DG + +
Sbjct: 222 AAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR---EEADGVYAASGGLR 275
Query: 517 T--FGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ APE L G +++SDV++FG++L+E S
Sbjct: 276 QVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 129/295 (43%), Gaps = 51/295 (17%)
Query: 358 LLGHGTYGSVYYGNIR-----NQEVAIKRM----TATKTKEFMAEMKILCKVHHSNLVEL 408
++G G +G V G ++ VAIK + T + ++F+ E I+ + H N++ L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHL--HDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G + ++ E + GSL S L HD Q + I V + A G++Y+ +
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ------FTVIQLVGMLRGIASGMKYLSD 165
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT--FGYLAPE 524
VHRD+ + NIL++S K+SDFGL++++ D EA T G + +PE
Sbjct: 166 MGA---VHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKIPIRWTSPE 220
Query: 525 YLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDS 584
+ T+ SDV+++G+VL+E++S E
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW---------------------------E 253
Query: 585 MSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQIL 639
MS + +D P DC + L C +D RP +Q+V L +++
Sbjct: 254 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 140/324 (43%), Gaps = 70/324 (21%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNI------RNQE---VAIKRMTATKTK----EFMAEM 394
F + + LG G +G V + +E VA+K + T+ + ++EM
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 395 KILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQ 442
+++ + H N++ L+G + L++I EYA KG+L+ +L +D +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 443 TSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG 502
+++ V ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 503 ------KTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIR 556
T++G V ++APE L D + T +SDV++FGV+++EI +
Sbjct: 209 NIDYYKNTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFT------- 254
Query: 557 TEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAK 615
L SP + + L + P +C ++ M+ +
Sbjct: 255 ---------------------LGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 616 QCVDEDPILRPDMKQVVISLSQIL 639
C P RP KQ+V L +IL
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 125/258 (48%), Gaps = 45/258 (17%)
Query: 325 PKALGTDVFD-MEKPVVFTYDEILFATEGFSDSSLLGHGTYGSV-------YYGNIRNQE 376
P +L D F +E P + F + LG G +G V G
Sbjct: 2 PLSLSVDAFKILEDP------KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTT 55
Query: 377 VAIKRM----TATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKS 432
VA+K + + ++ ++ ++E +L +V+H ++++L G + + L LI EYA+ GSL+
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 433 HLHDPQNRG-------------------QTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
L + + G + +L+ + A ++G++Y+ E V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLV 172
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF--GYLAPEYLTDGLA 531
HRD+ + NIL+ + KISDFGL++ V + ++ V + G ++A E L D +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDV---YEEDSYVKRSQGRIPVKWMAIESLFDHIY 229
Query: 532 TAKSDVYAFGVVLFEIIS 549
T +SDV++FGV+L+EI++
Sbjct: 230 TTQSDVWSFGVLLWEIVT 247
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 129/289 (44%), Gaps = 44/289 (15%)
Query: 362 GTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCK--VHHSNLVELIGY----AATE 415
G +G V+ + N VA+K + + +E +I + H NL++ I + E
Sbjct: 26 GRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLE 85
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHT------- 468
EL+LI + KGSL +L +G ++W +A +RGL Y+HE
Sbjct: 86 VELWLITAFHDKGSLTDYL-----KGNI-ITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 469 -KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
K HRD KS N+LL S A ++DFGLA + + VGT Y+APE L
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLA-VRFEPGKPPGDTHGQVGTRRYMAPEVLE 198
Query: 528 DGL-----ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSP 582
+ A + D+YA G+VL+E++S +A +G V + +ML
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELVSRCKA---ADGPVDE---------YMLPFEEEIG 246
Query: 583 DSMSMSSLKDYI-----DPNMMDLY-PHDCLFKMAMLAKQCVDEDPILR 625
S+ L++ + P + D + H L ++ + ++C D D R
Sbjct: 247 QHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEAR 295
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 137/301 (45%), Gaps = 37/301 (12%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKV--HHSNLVELIGYAATE- 415
+G G YG V+ G+ + + VA+K ++ K + E ++ V H N++ I T
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 104
Query: 416 ---DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH-----EH 467
+L+LI Y + GSL +L T+L + ++I L A GL ++H
Sbjct: 105 HSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDG-EATVTKVVGTFGYLAPEYL 526
K HRD+KS NIL+ + I+D GLA + ++++ + VGT Y+APE L
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 218
Query: 527 TDGLAT------AKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRN 580
+ + + D++AFG+VL+E+ MVS F + N
Sbjct: 219 DETIQVDCFDSYKRVDIWAFGLVLWEV---------ARRMVSNGIVEDYKPPFY-DVVPN 268
Query: 581 SPDSMSMSSL--KDYIDPNMMDLYPHD-CLFKMAMLAKQCVDEDPILRPDMKQVVISLSQ 637
P M + D PN+ + + D L +A L K+C ++P R ++ +L++
Sbjct: 269 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 328
Query: 638 I 638
I
Sbjct: 329 I 329
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 137/301 (45%), Gaps = 37/301 (12%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKV--HHSNLVELIGYAATE- 415
+G G YG V+ G+ + + VA+K ++ K + E ++ V H N++ I T
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 416 ---DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH-----EH 467
+L+LI Y + GSL +L T+L + ++I L A GL ++H
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDG-EATVTKVVGTFGYLAPEYL 526
K HRD+KS NIL+ + I+D GLA + ++++ + VGT Y+APE L
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 527 TDGLAT------AKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRN 580
+ + + D++AFG+VL+E+ MVS F + N
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV---------ARRMVSNGIVEDYKPPF-YDVVPN 239
Query: 581 SPDSMSMSSL--KDYIDPNMMDLYPHD-CLFKMAMLAKQCVDEDPILRPDMKQVVISLSQ 637
P M + D PN+ + + D L +A L K+C ++P R ++ +L++
Sbjct: 240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299
Query: 638 I 638
I
Sbjct: 300 I 300
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 132/300 (44%), Gaps = 48/300 (16%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQE-----VAIKRM----TATKTKEFMAEMKILCK 399
A E + +LG G +G VY G N + VA+K T ++FM+E I+
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR 459
+ H ++V+LIG E+ ++I E G L +L R + SL + V +L +
Sbjct: 66 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLE----RNKNSLKVLTLVLYSLQICK 120
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
+ Y+ + VHRDI NIL+ S K+ DFGL++ + +A+VT++
Sbjct: 121 AMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIK 175
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS-GKEAIIRTEGMVSKNQERRSLASFMLAAL 578
+++PE + T SDV+ F V ++EI+S GK+ E
Sbjct: 176 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE-------------------- 215
Query: 579 RNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
+ D + + D + P C + L +C D DP RP ++V SLS +
Sbjct: 216 --NKDVIGVLEKGDRLPK------PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 267
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 132/300 (44%), Gaps = 48/300 (16%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQE-----VAIKRM----TATKTKEFMAEMKILCK 399
A E + +LG G +G VY G N + VA+K T ++FM+E I+
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR 459
+ H ++V+LIG E+ ++I E G L +L R + SL + V +L +
Sbjct: 82 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLE----RNKNSLKVLTLVLYSLQICK 136
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
+ Y+ + VHRDI NIL+ S K+ DFGL++ + +A+VT++
Sbjct: 137 AMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIK 191
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS-GKEAIIRTEGMVSKNQERRSLASFMLAAL 578
+++PE + T SDV+ F V ++EI+S GK+ E
Sbjct: 192 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE-------------------- 231
Query: 579 RNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
+ D + + D + P C + L +C D DP RP ++V SLS +
Sbjct: 232 --NKDVIGVLEKGDRLPK------PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 283
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 118/257 (45%), Gaps = 27/257 (10%)
Query: 353 FSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTK----------EFMA--EMKILCKV 400
F +LG G +G V +R A +M A K E MA E +IL KV
Sbjct: 186 FRQYRVLGKGGFGEVCACQVR----ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
+ +V L T+D L L+ G LK H++ + GQ V A + G
Sbjct: 242 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY---HMGQAGFPEARAVFYAAEICCG 298
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGY 520
LE +H + V+RD+K NILLD +ISD GLA V +G+ T+ VGT GY
Sbjct: 299 LEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHV---PEGQ-TIKGRVGTVGY 351
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLA-ALR 579
+APE + + T D +A G +L+E+I+G+ + + + + + R + + R
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSER 411
Query: 580 NSPDSMSMSSLKDYIDP 596
SP + S+ S DP
Sbjct: 412 FSPQARSLCSQLLCKDP 428
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 113/218 (51%), Gaps = 36/218 (16%)
Query: 359 LGHGTYGSVYYGNI-------RNQEVAIKRM----TATKTKEFMAEMKILCKV-HHSNLV 406
LG G +G V + + VA+K + T ++ + M+E+KIL + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 407 ELIGYAATE--DELFLIYEYAQKGSLKSHL---------HDPQNRGQTSLSWIMRVQIAL 455
L+G A T+ L +I E+ + G+L ++L + P++ + L+ + +
Sbjct: 97 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSF 155
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD----GEATV 511
A+G+E++ +HRD+ + NILL KI DFGLA+ + K D G+A +
Sbjct: 156 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 512 TKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++APE + D + T +SDV++FGV+L+EI S
Sbjct: 213 P-----LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 140/324 (43%), Gaps = 70/324 (21%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNI------RNQE---VAIKRMTATKTK----EFMAEM 394
F + + LG G +G V + +E VA+K + T+ + ++EM
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 395 KILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQ 442
+++ + H N++ L+G + L++I YA KG+L+ +L +D +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 443 TSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG 502
+++ V ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 503 ------KTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIR 556
KT++G V ++APE L D + T +SDV++FGV+++EI +
Sbjct: 209 NIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFT------- 254
Query: 557 TEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAK 615
L SP + + L + P +C ++ M+ +
Sbjct: 255 ---------------------LGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 616 QCVDEDPILRPDMKQVVISLSQIL 639
C P RP KQ+V L +IL
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 139/319 (43%), Gaps = 47/319 (14%)
Query: 334 DMEKPVVFTYDEILFATEGFSDSS--LLGHGTYGSVYYGNIRNQ-----EVAIK---RMT 383
D++ ++ ++L E S ++G G +G VY+G +Q + AIK R+T
Sbjct: 2 DLDSALLAEVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT 61
Query: 384 ATKTKE-FMAEMKILCKVHHSNLVELIGYAATEDEL-FLIYEYAQKGSLKSHLHDPQNRG 441
+ E F+ E ++ ++H N++ LIG + L ++ Y G L + PQ R
Sbjct: 62 EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ-RN 120
Query: 442 QTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-L 500
T I L ARG+EY+ E +VHRD+ + N +LD +F K++DFGLA+ +
Sbjct: 121 PTVKDLI---SFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDI 174
Query: 501 VGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGM 560
+ + + A E L T KSDV++FGV+L+E++ T G
Sbjct: 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELL--------TRGA 226
Query: 561 VSKNQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDE 620
+ LA R P P C + + +QC +
Sbjct: 227 PPYRHIDPFDLTHFLAQGRRLPQ-------------------PEYCPDSLYQVMQQCWEA 267
Query: 621 DPILRPDMKQVVISLSQIL 639
DP +RP + +V + QI+
Sbjct: 268 DPAVRPTFRVLVGEVEQIV 286
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 137/301 (45%), Gaps = 37/301 (12%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKV--HHSNLVELIGYAATE- 415
+G G YG V+ G+ + + VA+K ++ K + E ++ V H N++ I T
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 416 ---DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH-----EH 467
+L+LI Y + GSL +L T+L + ++I L A GL ++H
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDG-EATVTKVVGTFGYLAPEYL 526
K HRD+KS NIL+ + I+D GLA + ++++ + VGT Y+APE L
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 527 TDGLAT------AKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRN 580
+ + + D++AFG+VL+E+ MVS F + N
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV---------ARRMVSNGIVEDYKPPF-YDVVPN 239
Query: 581 SPDSMSMSSL--KDYIDPNMMDLYPHD-CLFKMAMLAKQCVDEDPILRPDMKQVVISLSQ 637
P M + D PN+ + + D L +A L K+C ++P R ++ +L++
Sbjct: 240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299
Query: 638 I 638
I
Sbjct: 300 I 300
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 132/300 (44%), Gaps = 48/300 (16%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQE-----VAIKRM----TATKTKEFMAEMKILCK 399
A E + +LG G +G VY G N + VA+K T ++FM+E I+
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR 459
+ H ++V+LIG E+ ++I E G L +L R + SL + V +L +
Sbjct: 70 LDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLE----RNKNSLKVLTLVLYSLQICK 124
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
+ Y+ + VHRDI NIL+ S K+ DFGL++ + +A+VT++
Sbjct: 125 AMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIK 179
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIIS-GKEAIIRTEGMVSKNQERRSLASFMLAAL 578
+++PE + T SDV+ F V ++EI+S GK+ E
Sbjct: 180 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE-------------------- 219
Query: 579 RNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
+ D + + D + P C + L +C D DP RP ++V SLS +
Sbjct: 220 --NKDVIGVLEKGDRLPK------PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 30/218 (13%)
Query: 359 LGHGTYGSVYYGNIRNQE-------VAIKRM---TATKTKEFMAEMKILCKVHHSNLVEL 408
LG G +G V+ N VA+K + T K+F E ++L + H ++V+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHL--HDP-----------QNRGQTSLSWIMRVQIAL 455
G D L +++EY + G L L H P Q +G+ LS ++ IA
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML--HIAS 140
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
A G+ Y+ H+VHRD+ + N L+ + KI DFG+++ V T D +
Sbjct: 141 QIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYST-DYYRVGGHTM 196
Query: 516 GTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS-GKE 552
++ PE + T +SDV++FGV+L+EI + GK+
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ 234
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 140/324 (43%), Gaps = 70/324 (21%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNI------RNQE---VAIKRMTATKTK----EFMAEM 394
F + + LG G +G V + +E VA+K + T+ + ++EM
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 395 KILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQ 442
+++ + H N++ L+G + L++I YA KG+L+ +L +D +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 443 TSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG 502
+++ V ARG+EY+ +HRD+ + N+L+ KI+DFGLA+ +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 503 ------KTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIR 556
KT++G V ++APE L D + T +SDV++FGV+++EI +
Sbjct: 209 NIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIFT------- 254
Query: 557 TEGMVSKNQERRSLASFMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAK 615
L SP + + L + P +C ++ M+ +
Sbjct: 255 ---------------------LGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 616 QCVDEDPILRPDMKQVVISLSQIL 639
C P RP KQ+V L +IL
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 22/232 (9%)
Query: 331 DVFDMEKPVVFTYDEILFATEGFSDSSLLGHGTYGSVYY------GNIRNQEVAIKRMTA 384
D+ +KP D F LG G +G V G+ ++VA+K +
Sbjct: 2 DIVSEKKPAT-EVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKP 60
Query: 385 TKTKEFMAEMK----ILCKVHHSNLVELIGYAATEDE---LFLIYEYAQKGSLKSHLHDP 437
+A++K IL ++H N+V+ G TED + LI E+ GSLK +L P
Sbjct: 61 ESGGNHIADLKKEIEILRNLYHENIVKYKG-ICTEDGGNGIKLIMEFLPSGSLKEYL--P 117
Query: 438 QNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGL 497
+N+ + +L +++ A+ +G++Y+ YVHRD+ + N+L++S + KI DFGL
Sbjct: 118 KNKNKINLK--QQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGL 172
Query: 498 AKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
K + + + APE L SDV++FGV L E+++
Sbjct: 173 TKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 21/204 (10%)
Query: 359 LGHGTYGSVYY------GNIRNQEVAIKRMTATKTKEFMAEMK----ILCKVHHSNLVEL 408
LG G +G V G+ ++VA+K + +A++K IL ++H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 409 IGYAATEDE---LFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
G TED + LI E+ GSLK +L P+N+ + +L +++ A+ +G++Y+
Sbjct: 77 KG-ICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLK--QQLKYAVQICKGMDYL- 130
Query: 466 EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEY 525
YVHRD+ + N+L++S + KI DFGL K + + + APE
Sbjct: 131 --GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 188
Query: 526 LTDGLATAKSDVYAFGVVLFEIIS 549
L SDV++FGV L E+++
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 137/303 (45%), Gaps = 41/303 (13%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKV--HHSNLVELIGY----A 412
+G G YG V+ G R ++VA+K T+ + E +I V H N++ I
Sbjct: 45 IGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGT 104
Query: 413 ATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHT---- 468
+ +L+LI +Y + GSL +L T+L +++A + GL ++H
Sbjct: 105 GSWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158
Query: 469 -KTHYVHRDIKSSNILLDSAFRAKISDFGLA-KLVGKTSDGEATVTKVVGTFGYLAPEYL 526
K HRD+KS NIL+ I+D GLA K + T++ + VGT Y+ PE L
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL 218
Query: 527 TDGL------ATAKSDVYAFGVVLFEI----ISGKEAIIRTEGMVSKNQERRSLASFMLA 576
+ L + +D+Y+FG++L+E+ +SG G+V + Q L L
Sbjct: 219 DESLNRNHFQSYIMADMYSFGLILWEVARRCVSG--------GIVEEYQ----LPYHDLV 266
Query: 577 ALRNSPDSMSMSSLKDYIDPNMMDLYPHD-CLFKMAMLAKQCVDEDPILRPDMKQVVISL 635
S + M + P+ + + D CL +M L +C +P R +V +L
Sbjct: 267 PSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTL 326
Query: 636 SQI 638
+++
Sbjct: 327 AKM 329
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 24/207 (11%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKV--HHSNLVELIGY----A 412
+G G +G V+ G R +EVA+K ++ + + + E +I V H N++ I
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 109
Query: 413 ATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH-----EH 467
T +L+L+ +Y + GSL +L NR ++ + +++AL A GL ++H
Sbjct: 110 GTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 163
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDG-EATVTKVVGTFGYLAPEYL 526
K HRD+KS NIL+ I+D GLA +D + VGT Y+APE L
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 223
Query: 527 TDGL------ATAKSDVYAFGVVLFEI 547
D + + ++D+YA G+V +EI
Sbjct: 224 DDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 134/303 (44%), Gaps = 65/303 (21%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT----------ATKTKEFMAEMKILCKVHHSNLV 406
+G G +G V+ G + + VAIK + K +EF E+ I+ ++H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 407 ELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
+L Y + ++ E+ G L L D + + W +++++ LD A G+EY+
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAH----PIKWSVKLRLMLDIALGIEYMQN 140
Query: 467 HTKTHYVHRDIKSSNILLDSAFR-----AKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
VHRD++S NI L S AK++DFGL++ +V+ ++G F ++
Sbjct: 141 QNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ------QSVHSVSGLLGNFQWM 193
Query: 522 APEYL--TDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALR 579
APE + + T K+D Y+F ++L+ I++G+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPF------------------------- 228
Query: 580 NSPDSMSMSSLKDYI----DPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISL 635
D S +K +I + + P DC ++ + + C DP RP +V L
Sbjct: 229 ---DEYSYGKIK-FINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
Query: 636 SQI 638
S++
Sbjct: 285 SEL 287
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 33/299 (11%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKV--HHSNLVELIGY----A 412
+G G +G V+ G R +EVA+K ++ + + + E +I V H N++ I
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 96
Query: 413 ATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH-----EH 467
T +L+L+ +Y + GSL +L NR ++ + +++AL A GL ++H
Sbjct: 97 GTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 150
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDG-EATVTKVVGTFGYLAPEYL 526
K HRD+KS NIL+ I+D GLA +D + VGT Y+APE L
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 210
Query: 527 TDGL------ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRN 580
D + + ++D+YA G+V +EI + E L + L
Sbjct: 211 DDSINMKHFESFKRADIYAMGLVFWEIAR--------RCSIGGIHEDYQLPYYDLVPSDP 262
Query: 581 SPDSMSMSSLKDYIDPNMMDLYPH-DCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
S + M + + PN+ + + + L MA + ++C + R ++ +LSQ+
Sbjct: 263 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 321
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 33/299 (11%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKV--HHSNLVELIGY----A 412
+G G +G V+ G R +EVA+K ++ + + + E +I V H N++ I
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 71
Query: 413 ATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH-----EH 467
T +L+L+ +Y + GSL +L NR ++ + +++AL A GL ++H
Sbjct: 72 GTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 125
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDG-EATVTKVVGTFGYLAPEYL 526
K HRD+KS NIL+ I+D GLA +D + VGT Y+APE L
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 185
Query: 527 TDGL------ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRN 580
D + + ++D+YA G+V +EI + E L + L
Sbjct: 186 DDSINMKHFESFKRADIYAMGLVFWEIAR--------RCSIGGIHEDYQLPYYDLVPSDP 237
Query: 581 SPDSMSMSSLKDYIDPNMMDLYPH-DCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
S + M + + PN+ + + + L MA + ++C + R ++ +LSQ+
Sbjct: 238 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 296
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 33/299 (11%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKV--HHSNLVELIGY----A 412
+G G +G V+ G R +EVA+K ++ + + + E +I V H N++ I
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 76
Query: 413 ATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH-----EH 467
T +L+L+ +Y + GSL +L NR ++ + +++AL A GL ++H
Sbjct: 77 GTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 130
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDG-EATVTKVVGTFGYLAPEYL 526
K HRD+KS NIL+ I+D GLA +D + VGT Y+APE L
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 190
Query: 527 TDGL------ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRN 580
D + + ++D+YA G+V +EI + E L + L
Sbjct: 191 DDSINMKHFESFKRADIYAMGLVFWEIAR--------RCSIGGIHEDYQLPYYDLVPSDP 242
Query: 581 SPDSMSMSSLKDYIDPNMMDLYPH-DCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
S + M + + PN+ + + + L MA + ++C + R ++ +LSQ+
Sbjct: 243 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 301
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 24/207 (11%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKV--HHSNLVELIGY----A 412
+G G +G V+ G R +EVA+K ++ + + + E +I V H N++ I
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 70
Query: 413 ATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH-----EH 467
T +L+L+ +Y + GSL +L NR ++ + +++AL A GL ++H
Sbjct: 71 GTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 124
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDG-EATVTKVVGTFGYLAPEYL 526
K HRD+KS NIL+ I+D GLA +D + VGT Y+APE L
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 184
Query: 527 TDGL------ATAKSDVYAFGVVLFEI 547
D + + ++D+YA G+V +EI
Sbjct: 185 DDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 43/250 (17%)
Query: 359 LGHGTYGSVYYGNIRN--QEVAIKRMTATKTKE---FMAEMKILCKVHHSNLVELIGYAA 413
+G G+ G V ++ ++VA+K+M K + E+ I+ HH N+V++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 414 TEDELFLIYEYAQKGSLKSHL-HDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHY 472
DEL+++ E+ + G+L + H N Q + + L R L Y+H
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------TVCLSVLRALSYLHNQG---V 162
Query: 473 VHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLAT 532
+HRDIKS +ILL S R K+SDFG V K + VGT ++APE ++
Sbjct: 163 IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXL---VGTPYWMAPEVISRLPYG 219
Query: 533 AKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSLKD 592
+ D+++ G+++ E+I G+ N P +M ++D
Sbjct: 220 TEVDIWSLGIMVIEMIDGEPPYF------------------------NEPPLQAMRRIRD 255
Query: 593 YIDPNMMDLY 602
+ P + DL+
Sbjct: 256 SLPPRVKDLH 265
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 33/299 (11%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKV--HHSNLVELIGY----A 412
+G G +G V+ G R +EVA+K ++ + + + E +I V H N++ I
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 73
Query: 413 ATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH-----EH 467
T +L+L+ +Y + GSL +L NR ++ + +++AL A GL ++H
Sbjct: 74 GTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQ 127
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDG-EATVTKVVGTFGYLAPEYL 526
K HRD+KS NIL+ I+D GLA +D + VGT Y+APE L
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 187
Query: 527 TDGL------ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRN 580
D + + ++D+YA G+V +EI + E L + L
Sbjct: 188 DDSINMKHFESFKRADIYAMGLVFWEIAR--------RCSIGGIHEDYQLPYYDLVPSDP 239
Query: 581 SPDSMSMSSLKDYIDPNMMDLYPH-DCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
S + M + + PN+ + + + L MA + ++C + R ++ +LSQ+
Sbjct: 240 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 298
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 101/194 (52%), Gaps = 12/194 (6%)
Query: 359 LGHGTYGSVYYGNIRNQE-VAIK--RMTATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
+G G +G V+ G N++ VAIK R A ++F+ E +++ K+ H LV+L G +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ L+ E+ + G L +L RG + ++ + LD G+ Y+ E +HR
Sbjct: 76 APICLVTEFMEHGCLSDYLR--TQRGLFAAETLL--GMCLDVCEGMAYLEEAC---VIHR 128
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS 535
D+ + N L+ K+SDFG+ + V +T TK + +PE + ++KS
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSKS 186
Query: 536 DVYAFGVVLFEIIS 549
DV++FGV+++E+ S
Sbjct: 187 DVWSFGVLMWEVFS 200
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 24/207 (11%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKV--HHSNLVELIGYAATE- 415
+G G YG V+ G + VA+K ++ + + E +I V H N++ I T
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSR 75
Query: 416 ---DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH-----EH 467
+L+LI Y + GSL L + +L + +++A+ AA GL ++H
Sbjct: 76 NSSTQLWLITHYHEHGSLYDFLQ------RQTLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDG-EATVTKVVGTFGYLAPEYL 526
K HRD KS N+L+ S + I+D GLA + + SD + VGT Y+APE L
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 527 TDGLAT------AKSDVYAFGVVLFEI 547
+ + T +D++AFG+VL+EI
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 23/218 (10%)
Query: 347 LFATEGFSDSSLLGHGTYGSVYYGNIRNQ-EVAIK----RMTATKTKEFMAEMKILCKVH 401
+F +LG G +G R EV + R + F+ E+K++ +
Sbjct: 6 IFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLE 65
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H N+++ IG + L I EY + G+L+ + + W RV A D A G+
Sbjct: 66 HPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS----MDSQYPWSQRVSFAKDIASGM 121
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLV---GKTSDGEATVTK----- 513
Y+H + +HRD+ S N L+ ++DFGLA+L+ +G ++ K
Sbjct: 122 AYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKK 178
Query: 514 ---VVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEII 548
VVG ++APE + K DV++FG+VL EII
Sbjct: 179 RYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 85 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 131
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 132 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 109/209 (52%), Gaps = 18/209 (8%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 407 EL--IGYAATEDELFLIYEYAQ-KGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
+ I A T +++ +Y G+ L Q+ + + + QI RGL+Y
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFL-YQIL----RGLKY 159
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
IH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V T Y AP
Sbjct: 160 IHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 524 EYLTDGLATAKS-DVYAFGVVLFEIISGK 551
E + + KS D+++ G +L E++S +
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 85 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 131
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 132 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 100/194 (51%), Gaps = 12/194 (6%)
Query: 359 LGHGTYGSVYYGNIRNQE-VAIKRMTATKTKE--FMAEMKILCKVHHSNLVELIGYAATE 415
+G G +G V+ G N++ VAIK + E F+ E +++ K+ H LV+L G +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ L++E+ + G L +L RG + ++ + LD G+ Y+ E +HR
Sbjct: 95 APICLVFEFMEHGCLSDYLR--TQRGLFAAETLL--GMCLDVCEGMAYLEEAC---VIHR 147
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS 535
D+ + N L+ K+SDFG+ + V +T TK + +PE + ++KS
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSKS 205
Query: 536 DVYAFGVVLFEIIS 549
DV++FGV+++E+ S
Sbjct: 206 DVWSFGVLMWEVFS 219
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 111/216 (51%), Gaps = 34/216 (15%)
Query: 359 LGHGTYGSVYYGNI-------RNQEVAIKRM----TATKTKEFMAEMKILCKV-HHSNLV 406
LG G +G V + + VA+K + T ++ + M+E+KIL + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 407 ELIGYAATE--DELFLIYEYAQKGSLKSHLHDPQNRG-------QTSLSWIMRVQIALDA 457
L+G A T+ L +I E+ + G+L ++L +N + L+ + +
Sbjct: 95 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQV 153
Query: 458 ARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD----GEATVTK 513
A+G+E++ +HRD+ + NILL KI DFGLA+ + K D G+A +
Sbjct: 154 AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP- 209
Query: 514 VVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++APE + D + T +SDV++FGV+L+EI S
Sbjct: 210 ----LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGN--IRNQEVAIKRM--TATKTKEFMAEMKILCKV-HHSNLVE 407
F L+G+GTYG VY G Q AIK M T + +E E+ +L K HH N+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 408 LIGY------AATEDELFLIYEYAQKGSLKSHLHDPQNRGQT-SLSWIMRVQIALDAARG 460
G +D+L+L+ E+ GS+ + + +G T WI I + RG
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN--TKGNTLKEEWI--AYICREILRG 141
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGY 520
L ++H+H +HRDIK N+LL K+ DFG++ + +T T +GT +
Sbjct: 142 LSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT---FIGTPYW 195
Query: 521 LAPEYLT-----DGLATAKSDVYAFGVVLFEIISG 550
+APE + D KSD+++ G+ E+ G
Sbjct: 196 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 85 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 131
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 132 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 87 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 133
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 134 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 85 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 131
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 132 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 89 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 135
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 136 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 112/219 (51%), Gaps = 37/219 (16%)
Query: 359 LGHGTYGSVYYGNIRN-------QEVAIKRM----TATKTKEFMAEMKILCKV-HHSNLV 406
LG G +G V + + VA+K + T ++ + M+E+KIL + HH N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 407 ELIGYAATED--ELFLIYEYAQKGSLKSHLHD----------PQNRGQTSLSWIMRVQIA 454
L+G A T+ L +I E+ + G+L ++L P++ + L+ + +
Sbjct: 96 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYS 154
Query: 455 LDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD----GEAT 510
A+G+E++ +HRD+ + NILL KI DFGLA+ + K D G+A
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 511 VTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ ++APE + D + T +SDV++FGV+L+EI S
Sbjct: 212 LP-----LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 105 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 151
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 152 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA----TKTKEFMAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ T + + E+KIL + H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 89 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 135
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 136 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 18/208 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG-NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHSN 404
E + +G GTYG VY + + + VA+KR+ E + E+ +L ++HH N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
+V LI +E L L++E+ +K LK L + + Q S I Q+ RG+ +
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLL----RGVAHC 135
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
H+H +HRD+K N+L++S K++DFGLA+ G + T V T Y AP+
Sbjct: 136 HQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPV---RSYTHEVVTLWYRAPD 189
Query: 525 YLTDGLATAKS-DVYAFGVVLFEIISGK 551
L + S D+++ G + E+I+GK
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 18/208 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG-NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHSN 404
E + +G GTYG VY + + + VA+KR+ E + E+ +L ++HH N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
+V LI +E L L++E+ +K LK L + + Q S I Q+ RG+ +
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLL----RGVAHC 135
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
H+H +HRD+K N+L++S K++DFGLA+ G + T V T Y AP+
Sbjct: 136 HQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPV---RSYTHEVVTLWYRAPD 189
Query: 525 YLTDGLATAKS-DVYAFGVVLFEIISGK 551
L + S D+++ G + E+I+GK
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 93 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 139
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 140 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 85 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 131
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 132 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 83 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 129
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 130 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 90 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 136
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 137 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 83 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 129
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 130 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 91 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 137
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 138 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 82 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 128
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 129 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 89 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKCQHLSNDHICYFLY 135
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 136 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 89 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 135
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 136 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 38/220 (17%)
Query: 359 LGHGTYGSVYYGNIRN-------QEVAIKRM----TATKTKEFMAEMKILCKV-HHSNLV 406
LG G +G V + + VA+K + T ++ + M+E+KIL + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 407 ELIGYAATED--ELFLIYEYAQKGSLKSHLHD-----------PQNRGQTSLSWIMRVQI 453
L+G A T+ L +I E+ + G+L ++L P++ + L+ +
Sbjct: 95 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD----GEA 509
+ A+G+E++ +HRD+ + NILL KI DFGLA+ + K D G+A
Sbjct: 154 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 510 TVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ ++APE + D + T +SDV++FGV+L+EI S
Sbjct: 211 RLP-----LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 111/216 (51%), Gaps = 34/216 (15%)
Query: 359 LGHGTYGSVYYGNI-------RNQEVAIKRM----TATKTKEFMAEMKILCKV-HHSNLV 406
LG G +G V + + VA+K + T ++ + M+E+KIL + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 407 ELIGYAATE--DELFLIYEYAQKGSLKSHLHDPQNRG-------QTSLSWIMRVQIALDA 457
L+G A T+ L +I E+ + G+L ++L +N + L+ + +
Sbjct: 95 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 458 ARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD----GEATVTK 513
A+G+E++ +HRD+ + NILL KI DFGLA+ + K D G+A +
Sbjct: 154 AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP- 209
Query: 514 VVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++APE + D + T +SDV++FGV+L+EI S
Sbjct: 210 ----LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 133/303 (43%), Gaps = 65/303 (21%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT----------ATKTKEFMAEMKILCKVHHSNLV 406
+G G +G V+ G + + VAIK + K +EF E+ I+ ++H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 407 ELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
+L Y + ++ E+ G L L D + + W +++++ LD A G+EY+
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAH----PIKWSVKLRLMLDIALGIEYMQN 140
Query: 467 HTKTHYVHRDIKSSNILLDSAFR-----AKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
VHRD++S NI L S AK++DFG ++ +V+ ++G F ++
Sbjct: 141 QNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ------QSVHSVSGLLGNFQWM 193
Query: 522 APEYL--TDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALR 579
APE + + T K+D Y+F ++L+ I++G+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPF------------------------- 228
Query: 580 NSPDSMSMSSLKDYI----DPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISL 635
D S +K +I + + P DC ++ + + C DP RP +V L
Sbjct: 229 ---DEYSYGKIK-FINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
Query: 636 SQI 638
S++
Sbjct: 285 SEL 287
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 38/220 (17%)
Query: 359 LGHGTYGSVYYGNIRN-------QEVAIKRM----TATKTKEFMAEMKILCKV-HHSNLV 406
LG G +G V + + VA+K + T ++ + M+E+KIL + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 407 ELIGYAATE--DELFLIYEYAQKGSLKSHLHD-----------PQNRGQTSLSWIMRVQI 453
L+G A T+ L +I E+ + G+L ++L P++ + L+ +
Sbjct: 86 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD----GEA 509
+ A+G+E++ +HRD+ + NILL KI DFGLA+ + K D G+A
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 510 TVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ ++APE + D + T +SDV++FGV+L+EI S
Sbjct: 202 RLP-----LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 38/220 (17%)
Query: 359 LGHGTYGSVYYGNIRN-------QEVAIKRM----TATKTKEFMAEMKILCKV-HHSNLV 406
LG G +G V + + VA+K + T ++ + M+E+KIL + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 407 ELIGYAATED--ELFLIYEYAQKGSLKSHLHD-----------PQNRGQTSLSWIMRVQI 453
L+G A T+ L +I E+ + G+L ++L P++ + L+ +
Sbjct: 95 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD----GEA 509
+ A+G+E++ +HRD+ + NILL KI DFGLA+ + K D G+A
Sbjct: 154 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 510 TVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ ++APE + D + T +SDV++FGV+L+EI S
Sbjct: 211 RLP-----LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 38/220 (17%)
Query: 359 LGHGTYGSVYYGNIRN-------QEVAIKRM----TATKTKEFMAEMKILCKV-HHSNLV 406
LG G +G V + + VA+K + T ++ + M+E+KIL + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 407 ELIGYAATED--ELFLIYEYAQKGSLKSHLHD-----------PQNRGQTSLSWIMRVQI 453
L+G A T+ L +I E+ + G+L ++L P++ + L+ +
Sbjct: 95 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD----GEA 509
+ A+G+E++ +HRD+ + NILL KI DFGLA+ + K D G+A
Sbjct: 154 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 510 TVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ ++APE + D + T +SDV++FGV+L+EI S
Sbjct: 211 RLP-----LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAI++++ + + + + E+KIL + H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 89 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 135
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 136 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 38/220 (17%)
Query: 359 LGHGTYGSVYYGNIRN-------QEVAIKRM----TATKTKEFMAEMKILCKV-HHSNLV 406
LG G +G V + + VA+K + T ++ + M+E+KIL + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 407 ELIGYAATE--DELFLIYEYAQKGSLKSHLHD-----------PQNRGQTSLSWIMRVQI 453
L+G A T+ L +I E+ + G+L ++L P++ + L+ +
Sbjct: 97 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICY 155
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD----GEA 509
+ A+G+E++ +HRD+ + NILL KI DFGLA+ + K D G+A
Sbjct: 156 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 510 TVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ ++APE + D + T +SDV++FGV+L+EI S
Sbjct: 213 RLP-----LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 10 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA +G + L + Q + ++I + A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------A 123
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + T + GT
Sbjct: 124 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTL 175
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 38/220 (17%)
Query: 359 LGHGTYGSVYYGNIRN-------QEVAIKRM----TATKTKEFMAEMKILCKV-HHSNLV 406
LG G +G V + + VA+K + T ++ + M+E+KIL + HH N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 407 ELIGYAATE--DELFLIYEYAQKGSLKSHLHD-----------PQNRGQTSLSWIMRVQI 453
L+G A T+ L +I E+ + G+L ++L P++ + L+ +
Sbjct: 132 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD----GEA 509
+ A+G+E++ +HRD+ + NILL KI DFGLA+ + K D G+A
Sbjct: 191 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 510 TVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ ++APE + D + T +SDV++FGV+L+EI S
Sbjct: 248 RLP-----LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 38/220 (17%)
Query: 359 LGHGTYGSVYYGNIRN-------QEVAIKRM----TATKTKEFMAEMKILCKV-HHSNLV 406
LG G +G V + + VA+K + T ++ + M+E+KIL + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 407 ELIGYAATE--DELFLIYEYAQKGSLKSHLHD-----------PQNRGQTSLSWIMRVQI 453
L+G A T+ L +I E+ + G+L ++L P++ + L+ +
Sbjct: 86 NLLG-ACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD----GEA 509
+ A+G+E++ +HRD+ + NILL KI DFGLA+ + K D G+A
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 510 TVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ ++APE + D + T +SDV++FGV+L+EI S
Sbjct: 202 RLP-----LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 87 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 133
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 134 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY +N + +A+K + + + + E++I
Sbjct: 5 WALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 65 LRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------A 118
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + V S A + GT
Sbjct: 119 NALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAA---LCGTL 170
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 133/303 (43%), Gaps = 65/303 (21%)
Query: 359 LGHGTYGSVYYGNIRNQE--VAIKRMT----------ATKTKEFMAEMKILCKVHHSNLV 406
+G G +G V+ G + + VAIK + K +EF E+ I+ ++H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 407 ELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
+L Y + ++ E+ G L L D + + W +++++ LD A G+EY+
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAH----PIKWSVKLRLMLDIALGIEYMQN 140
Query: 467 HTKTHYVHRDIKSSNILLDSAFR-----AKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
VHRD++S NI L S AK++DF L++ +V+ ++G F ++
Sbjct: 141 QNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ------QSVHSVSGLLGNFQWM 193
Query: 522 APEYL--TDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALR 579
APE + + T K+D Y+F ++L+ I++G+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPF------------------------- 228
Query: 580 NSPDSMSMSSLKDYI----DPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISL 635
D S +K +I + + P DC ++ + + C DP RP +V L
Sbjct: 229 ---DEYSYGKIK-FINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
Query: 636 SQI 638
S++
Sbjct: 285 SEL 287
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 12/194 (6%)
Query: 359 LGHGTYGSVYYGNIRNQ-EVAIKRMT--ATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
LG G +G V G + Q +VA+K + + EF E + + K+ H LV+ G + E
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
++++ EY G L ++L ++ G+ L +++ D G+ ++ H ++HR
Sbjct: 76 YPIYIVTEYISNGCLLNYL---RSHGK-GLEPSQLLEMCYDVCEGMAFLESH---QFIHR 128
Query: 476 DIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS 535
D+ + N L+D K+SDFG+ + V + TK + APE ++KS
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKF--PVKWSAPEVFHYFKYSSKS 186
Query: 536 DVYAFGVVLFEIIS 549
DV+AFG++++E+ S
Sbjct: 187 DVWAFGILMWEVFS 200
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 87 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 133
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D +T+ V
Sbjct: 134 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 134/302 (44%), Gaps = 53/302 (17%)
Query: 357 SLLGHGTYGSVYYGNIRNQE-----VAIKRM-----TATKTKEFMAEMKILCKVHHSNLV 406
+LG G +GSV GN++ ++ VA+K M + + +EF++E + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 407 ELIGYAATED-----ELFLIYEYAQKGSLKSHL-HDPQNRGQTSLSWIMRVQIALDAARG 460
L+G + +I + + G L ++L + G + ++ +D A G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF-- 518
+EY+ + +++HRD+ + N +L ++DFGL+K K G+ +
Sbjct: 160 MEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSK---KIYSGDYYRQGRIAKMPV 213
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVS-KNQERRSLASFMLAA 577
++A E L D + T+KSDV+AFGV ++EI T GM + + ++L
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIA--------TRGMTPYPGVQNHEMYDYLLHG 265
Query: 578 LRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQ 637
R LK P DCL ++ + C DP+ RP + + L +
Sbjct: 266 HR----------LKQ----------PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305
Query: 638 IL 639
+L
Sbjct: 306 LL 307
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 134/296 (45%), Gaps = 48/296 (16%)
Query: 356 SSLLGHGTYGSVY--YGNIRNQEVAIKRMTATKTK----EFMAEMKILCKVHHSNLVELI 409
++G G V Y + ++VAIKR+ K + E + E++ + + HH N+V
Sbjct: 15 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYY 74
Query: 410 GYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQ--------TSLSWIMRVQIALDAARGL 461
+DEL+L+ + GS+ + +G+ ++++ I+R + GL
Sbjct: 75 TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR-----EVLEGL 129
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKV----VGT 517
EY+H K +HRD+K+ NILL +I+DFG++ + + G+ T KV VGT
Sbjct: 130 EYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLA--TGGDITRNKVRKTFVGT 184
Query: 518 FGYLAPEYLTDGLA-TAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLA 576
++APE + K+D+++FG+ E+ +G + M ++
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM-----------KVLML 233
Query: 577 ALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVV 632
L+N P S+ D M+ Y KM L C+ +DP RP +++
Sbjct: 234 TLQNDPPSLETG----VQDKEMLKKY-GKSFRKMISL---CLQKDPEKRPTAAELL 281
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIK------RMTATKTKEFMAEMKILCKVHHSNLVELIG 410
LG G +VY I N +VAIK R K F E+ ++ H N+V +I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 411 YAATEDELFLIYEYAQKGSLKSHL--HDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+D +L+ EY + +L ++ H P LS + G+++ H+
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHGP-------LSVDTAINFTNQILDGIKHAHD-- 129
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
VHRDIK NIL+DS KI DFG+AK + +TS + V+GT Y +PE
Sbjct: 130 -MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT--NHVLGTVQYFSPEQ-AK 185
Query: 529 GLATAK-SDVYAFGVVLFEIISGK 551
G AT + +D+Y+ G+VL+E++ G+
Sbjct: 186 GEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 5 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------A 118
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + T++ GT
Sbjct: 119 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTELCGTL 170
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 130/291 (44%), Gaps = 38/291 (13%)
Query: 356 SSLLGHGTYGSVY--YGNIRNQEVAIKRMTATKTK----EFMAEMKILCKVHHSNLVELI 409
++G G V Y + ++VAIKR+ K + E + E++ + + HH N+V
Sbjct: 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYY 79
Query: 410 GYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIAL---DAARGLEYIHE 466
+DEL+L+ + GS+ + +G+ + IA + GLEY+H
Sbjct: 80 TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH- 138
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKV----VGTFGYLA 522
K +HRD+K+ NILL +I+DFG++ + + G+ T KV VGT ++A
Sbjct: 139 --KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLA--TGGDITRNKVRKTFVGTPCWMA 194
Query: 523 PEYLTDGLA-TAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNS 581
PE + K+D+++FG+ E+ +G + M ++ L+N
Sbjct: 195 PEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM-----------KVLMLTLQND 243
Query: 582 PDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVV 632
P S+ D M+ Y KM L C+ +DP RP +++
Sbjct: 244 PPSLETG----VQDKEMLKKY-GKSFRKMISL---CLQKDPEKRPTAAELL 286
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 38/220 (17%)
Query: 359 LGHGTYGSVYYGNIRN-------QEVAIKRM----TATKTKEFMAEMKILCKV-HHSNLV 406
LG G +G V + + VA+K + T ++ + M+E+KIL + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 407 ELIGYAATE--DELFLIYEYAQKGSLKSHLHD-----------PQNRGQTSLSWIMRVQI 453
L+G A T+ L +I E+ + G+L ++L P++ + L+ +
Sbjct: 86 NLLG-ACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD----GEA 509
+ A+G+E++ +HRD+ + NILL KI DFGLA+ + K D G+A
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 510 TVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ ++APE + D + T +SDV++FGV+L+EI S
Sbjct: 202 RLP-----LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 89 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 135
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D + + V
Sbjct: 136 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 34/217 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
+++ S +G G YG V Y N+ VAIK+++ + + + + E+KIL + H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ---------IAL 455
+ I A T +++ +Y Q+ +T L +++ Q
Sbjct: 90 GINDIIRAPTIEQMKDVYIV-------------QDLMETDLYKLLKTQHLSNDHICYFLY 136
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
RGL+YIH + +HRD+K SN+LL++ KI DFGLA++ D + + V
Sbjct: 137 QILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 516 GTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE + + KS D+++ G +L E++S +
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 38/220 (17%)
Query: 359 LGHGTYGSVYYGNIRN-------QEVAIKRM----TATKTKEFMAEMKILCKV-HHSNLV 406
LG G +G V + + VA+K + T ++ + M+E+KIL + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 407 ELIGYAATE--DELFLIYEYAQKGSLKSHLHD-----------PQNRGQTSLSWIMRVQI 453
L+G A T+ L +I E+ + G+L ++L P++ + L+ +
Sbjct: 86 NLLG-ACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD----GEA 509
+ A+G+E++ +HRD+ + NILL KI DFGLA+ + K D G+A
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 510 TVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ ++APE + D + T +SDV++FGV+L+EI S
Sbjct: 202 RLP-----LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 105/245 (42%), Gaps = 33/245 (13%)
Query: 353 FSDSSLLGHGTYGSV----------YYG-NIRNQEVAIKRMTATKTKEFMAEMKILCKVH 401
F LLG GT+G V YY I +EV I + T + E ++L
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQNTR 68
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H L L T D L + EYA G L HL +R + R A + L
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGA-EIVSAL 123
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
EY+H V+RDIK N++LD KI+DFGL K SDG AT+ GT YL
Sbjct: 124 EYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDG-ATMKXFCGTPEYL 177
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNS 581
APE L D D + GVV++E++ G+ + NQ+ L +L
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--------LPFYNQDHERLFELILMEEIRF 229
Query: 582 PDSMS 586
P ++S
Sbjct: 230 PRTLS 234
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 31 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 90
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------A 144
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + T + GT
Sbjct: 145 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTL 196
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 127/288 (44%), Gaps = 46/288 (15%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIK----RMTATKTKEFMAEMKILCKVHHSN 404
E F+ +G G++G VY G N + VAIK + ++ E+ +L +
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
+ G +L++I EY GS L P +T ++ I+R + +GL+Y+
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLL-KPGPLEETYIATILR-----EILKGLDYL 132
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
H K +HRDIK++N+LL K++DFG+A G+ +D + VGT ++APE
Sbjct: 133 HSERK---IHRDIKAANVLLSEQGDVKLADFGVA---GQLTDTQIKRNXFVGTPFWMAPE 186
Query: 525 YLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDS 584
+ K+D+++ G+ E+ G+ N + + L +NSP +
Sbjct: 187 VIKQSAYDFKADIWSLGITAIELAKGEPP----------NSDLHPMRVLFLIP-KNSPPT 235
Query: 585 MSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVV 632
+ K + + + C+++DP RP K+++
Sbjct: 236 LEGQHSKPFKE-----------------FVEACLNKDPRFRPTAKELL 266
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 105/245 (42%), Gaps = 33/245 (13%)
Query: 353 FSDSSLLGHGTYGSV----------YYG-NIRNQEVAIKRMTATKTKEFMAEMKILCKVH 401
F LLG GT+G V YY I +EV I + T + E ++L
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQNTR 63
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H L L T D L + EYA G L HL +R + R A + L
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGA-EIVSAL 118
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
EY+H V+RDIK N++LD KI+DFGL K SDG AT+ GT YL
Sbjct: 119 EYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDG-ATMKXFCGTPEYL 172
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNS 581
APE L D D + GVV++E++ G+ + NQ+ L +L
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--------LPFYNQDHERLFELILMEEIRF 224
Query: 582 PDSMS 586
P ++S
Sbjct: 225 PRTLS 229
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 105/245 (42%), Gaps = 33/245 (13%)
Query: 353 FSDSSLLGHGTYGSV----------YYG-NIRNQEVAIKRMTATKTKEFMAEMKILCKVH 401
F LLG GT+G V YY I +EV I + T + E ++L
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQNTR 63
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H L L T D L + EYA G L HL +R + R A + L
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGA-EIVSAL 118
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
EY+H V+RDIK N++LD KI+DFGL K SDG AT+ GT YL
Sbjct: 119 EYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDG-ATMKTFCGTPEYL 172
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNS 581
APE L D D + GVV++E++ G+ + NQ+ L +L
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--------LPFYNQDHERLFELILMEEIRF 224
Query: 582 PDSMS 586
P ++S
Sbjct: 225 PRTLS 229
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 5 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELA 118
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + T + GT
Sbjct: 119 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTL 170
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 105/245 (42%), Gaps = 33/245 (13%)
Query: 353 FSDSSLLGHGTYGSV----------YYG-NIRNQEVAIKRMTATKTKEFMAEMKILCKVH 401
F LLG GT+G V YY I +EV I + T + E ++L
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQNTR 63
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H L L T D L + EYA G L HL +R + R A + L
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGA-EIVSAL 118
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
EY+H V+RDIK N++LD KI+DFGL K SDG AT+ GT YL
Sbjct: 119 EYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDG-ATMKTFCGTPEYL 172
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNS 581
APE L D D + GVV++E++ G+ + NQ+ L +L
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--------LPFYNQDHERLFELILMEEIRF 224
Query: 582 PDSMS 586
P ++S
Sbjct: 225 PRTLS 229
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 105/245 (42%), Gaps = 33/245 (13%)
Query: 353 FSDSSLLGHGTYGSV----------YYG-NIRNQEVAIKRMTATKTKEFMAEMKILCKVH 401
F LLG GT+G V YY I +EV I + T + E ++L
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQNTR 63
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H L L T D L + EYA G L HL +R + R A + L
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGA-EIVSAL 118
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
EY+H V+RDIK N++LD KI+DFGL K SDG AT+ GT YL
Sbjct: 119 EYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDG-ATMKXFCGTPEYL 172
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNS 581
APE L D D + GVV++E++ G+ + NQ+ L +L
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--------LPFYNQDHERLFELILMEEIRF 224
Query: 582 PDSMS 586
P ++S
Sbjct: 225 PRTLS 229
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 5 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELA 118
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + T + GT
Sbjct: 119 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLCGTL 170
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + ++ +A+K + + + + E++I
Sbjct: 2 WALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 61
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELA 115
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + T + GT
Sbjct: 116 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTL 167
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 168 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 105/245 (42%), Gaps = 33/245 (13%)
Query: 353 FSDSSLLGHGTYGSV----------YYG-NIRNQEVAIKRMTATKTKEFMAEMKILCKVH 401
F LLG GT+G V YY I +EV I + T + E ++L
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQNTR 63
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H L L T D L + EYA G L HL +R + R A + L
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGA-EIVSAL 118
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
EY+H V+RDIK N++LD KI+DFGL K SDG AT+ GT YL
Sbjct: 119 EYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDG-ATMKXFCGTPEYL 172
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNS 581
APE L D D + GVV++E++ G+ + NQ+ L +L
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--------LPFYNQDHERLFELILMEEIRF 224
Query: 582 PDSMS 586
P ++S
Sbjct: 225 PRTLS 229
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 132/288 (45%), Gaps = 46/288 (15%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIK----RMTATKTKEFMAEMKILCKVHHSN 404
E F+ +G G++G V+ G N + VAIK + ++ E+ +L +
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
+ + G + +L++I EY GS L +P +T ++ I+R + +GL+Y+
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGS-ALDLLEPGPLDETQIATILR-----EILKGLDYL 140
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
H K +HRDIK++N+LL K++DFG+A G+ +D + VGT ++APE
Sbjct: 141 HSEKK---IHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQIKRNTFVGTPFWMAPE 194
Query: 525 YLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDS 584
+ +K+D+++ G+ E+ G+ + E + L +N+P +
Sbjct: 195 VIKQSAYDSKADIWSLGITAIELARGEPP----------HSELHPMKVLFLIP-KNNPPT 243
Query: 585 MSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVV 632
+ +Y P + + C++++P RP K+++
Sbjct: 244 LE----GNYSKP-------------LKEFVEACLNKEPSFRPTAKELL 274
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 6 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 65
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------A 119
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + T + GT
Sbjct: 120 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLCGTL 171
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 8 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELA 121
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + T + GT
Sbjct: 122 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTL 173
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 18/207 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIK----RMTATKTKEFMAEMKILCKVHHSN 404
E F+ +G G++G V+ G N + VAIK + ++ E+ +L +
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
+ + G + +L++I EY GS L +P +T ++ I+R + +GL+Y+
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILR-----EILKGLDYL 135
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
H K +HRDIK++N+LL K++DFG+A G+ +D + VGT ++APE
Sbjct: 136 HSEKK---IHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQIKRNXFVGTPFWMAPE 189
Query: 525 YLTDGLATAKSDVYAFGVVLFEIISGK 551
+ +K+D+++ G+ E+ G+
Sbjct: 190 VIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 105/245 (42%), Gaps = 33/245 (13%)
Query: 353 FSDSSLLGHGTYGSV----------YYG-NIRNQEVAIKRMTATKTKEFMAEMKILCKVH 401
F LLG GT+G V YY I +EV I + T + E ++L
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQNTR 66
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H L L T D L + EYA G L HL +R + R A + L
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGA-EIVSAL 121
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
EY+H V+RDIK N++LD KI+DFGL K SDG AT+ GT YL
Sbjct: 122 EYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDG-ATMKTFCGTPEYL 175
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNS 581
APE L D D + GVV++E++ G+ + NQ+ L +L
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--------LPFYNQDHERLFELILMEEIRF 227
Query: 582 PDSMS 586
P ++S
Sbjct: 228 PRTLS 232
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 22 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 81
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 82 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------A 135
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + T + GT
Sbjct: 136 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTL 187
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 188 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 5 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------A 118
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + T + GT
Sbjct: 119 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLCGTL 170
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 131/273 (47%), Gaps = 36/273 (13%)
Query: 307 SGDYIQTTGEVSNPPITIPKALGTDVFD---------MEKPVVFTYDEILFATEGFSDSS 357
S Y +++P P + T VF+ +K + D +L A
Sbjct: 289 SDGYTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIA------DI 342
Query: 358 LLGHGTYGSVYYGNIRNQ----EVAIKRMT----ATKTKEFMAEMKILCKVHHSNLVELI 409
LG G +GSV G R + +VAIK + T+E M E +I+ ++ + +V LI
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 410 GYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTK 469
G E L L+ E A G L L R + +S + ++ + G++Y+ E
Sbjct: 403 GVCQAE-ALMLVMEMAGGGPLHKFLVG--KREEIPVSNV--AELLHQVSMGMKYLEE--- 454
Query: 470 THYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF--GYLAPEYLT 527
++VHR++ + N+LL + AKISDFGL+K +G +D + G + + APE +
Sbjct: 455 KNFVHRNLAARNVLLVNRHYAKISDFGLSKALG--ADDSYYTARSAGKWPLKWYAPECIN 512
Query: 528 DGLATAKSDVYAFGVVLFEIIS-GKEAIIRTEG 559
+++SDV+++GV ++E +S G++ + +G
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG 545
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 10 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------A 123
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + T + GT
Sbjct: 124 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTL 175
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 10 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------A 123
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + T + GT
Sbjct: 124 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTDLCGTL 175
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 5 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELA 118
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + T + GT
Sbjct: 119 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTXLCGTL 170
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 18/207 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIK----RMTATKTKEFMAEMKILCKVHHSN 404
E F+ +G G++G V+ G N + VAIK + ++ E+ +L +
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
+ + G + +L++I EY GS L +P +T ++ I+R + +GL+Y+
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILR-----EILKGLDYL 120
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
H K +HRDIK++N+LL K++DFG+A G+ +D + VGT ++APE
Sbjct: 121 HSEKK---IHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQIKRNXFVGTPFWMAPE 174
Query: 525 YLTDGLATAKSDVYAFGVVLFEIISGK 551
+ +K+D+++ G+ E+ G+
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 56/293 (19%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIK----RMTATKTKEFMAEMKILCKVHHSN 404
E F+ +G G++G V+ G N Q VAIK + ++ E+ +L + S
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHLH-DPQNRGQ--TSLSWIMRVQIALDAARGL 461
+ + G +L++I EY GS L P + Q T L I++ GL
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILK---------GL 133
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+Y+H K +HRDIK++N+LL K++DFG+A G+ +D + VGT ++
Sbjct: 134 DYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVA---GQLTDTQIKRNTFVGTPFWM 187
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNS 581
APE + +K+D+++ G+ E+ G+ N + + L N
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGEPP----------NSDMHPMRVLFLIPKNNP 237
Query: 582 PDSMS--MSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVV 632
P + S K++ID C+++DP RP K+++
Sbjct: 238 PTLVGDFTKSFKEFID--------------------ACLNKDPSFRPTAKELL 270
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 4 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 63
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 64 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELA 117
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + T + GT
Sbjct: 118 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTL 169
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 170 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 116/258 (44%), Gaps = 34/258 (13%)
Query: 353 FSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKT------------KEFMAEMKILCKV 400
F D +LG G +G V+ ++ A ++ A K + M E KIL KV
Sbjct: 187 FLDFRVLGRGGFGEVFACQMK----ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLH--DPQNRG-QTSLSWIMRVQIALDA 457
H +V L T+ +L L+ G ++ H++ D N G Q + QI
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV--- 299
Query: 458 ARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT 517
GLE++H+ + ++RD+K N+LLD +ISD GLA + G+ GT
Sbjct: 300 -SGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAV---ELKAGQTKTKGYAGT 352
Query: 518 FGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAA 577
G++APE L D +A GV L+E+I+ + R G +N+E L +L
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR-GPFRARGEKVENKE---LKQRVLEQ 408
Query: 578 LRNSPDSMSMSSLKDYID 595
PD S +S KD+ +
Sbjct: 409 AVTYPDKFSPAS-KDFCE 425
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 9 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 68
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELA 122
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + T + GT
Sbjct: 123 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTL 174
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 107/208 (51%), Gaps = 16/208 (7%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
++ +G G YG V Y ++R VAIK+++ + + + + E++IL + H N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 407 EL--IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
+ I A+T + + +Y + +++ L+ Q S I RGL+YI
Sbjct: 105 GIRDILRASTLEAMRDVY--IVQDLMETDLYKLLKSQQLSNDHI--CYFLYQILRGLKYI 160
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
H + +HRD+K SN+L+++ KI DFGLA++ D +T+ V T Y APE
Sbjct: 161 H---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
Query: 525 YLTDGLATAKS-DVYAFGVVLFEIISGK 551
+ + KS D+++ G +L E++S +
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 26/213 (12%)
Query: 359 LGHGTYGSVYYGNI-------RNQEVAIK----RMTATKTKEFMAEMKILCKVHHSNLVE 407
LG +G VY G++ + Q VAIK + +EF E + ++ H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQTSLSWIMRVQIALD 456
L+G + L +I+ Y G L L D +++L V +
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 457 AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG 516
A G+EY+ H H VH+D+ + N+L+ KISD GL + V +D + +
Sbjct: 154 IAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREV-YAADYYKLLGNSLL 209
Query: 517 TFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++APE + G + SD++++GVVL+E+ S
Sbjct: 210 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 10 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA +G + L + Q + ++I + A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------A 123
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + + GT
Sbjct: 124 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLXGTL 175
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 18/207 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIK----RMTATKTKEFMAEMKILCKVHHSN 404
E F+ +G G++G V+ G N + VAIK + ++ E+ +L +
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
+ + G + +L++I EY GS L +P +T ++ I+R + +GL+Y+
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILR-----EILKGLDYL 120
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
H K +HRDIK++N+LL K++DFG+A G+ +D + VGT ++APE
Sbjct: 121 HSEKK---IHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQIKRNTFVGTPFWMAPE 174
Query: 525 YLTDGLATAKSDVYAFGVVLFEIISGK 551
+ +K+D+++ G+ E+ G+
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 26/213 (12%)
Query: 359 LGHGTYGSVYYGNI-------RNQEVAIK----RMTATKTKEFMAEMKILCKVHHSNLVE 407
LG +G VY G++ + Q VAIK + +EF E + ++ H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHL-----------HDPQNRGQTSLSWIMRVQIALD 456
L+G + L +I+ Y G L L D +++L V +
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 457 AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG 516
A G+EY+ H H VH+D+ + N+L+ KISD GL + V +D + +
Sbjct: 137 IAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREV-YAADYYKLLGNSLL 192
Query: 517 TFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
++APE + G + SD++++GVVL+E+ S
Sbjct: 193 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 359 LGHGTYGSVYYGNIRN----QE---VAIKRM---TATKTKEFMAEMKILCKVHHSNLVEL 408
LG G +G V+ N Q+ VA+K + + K+F E ++L + H ++V+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHL--HDP------QNRGQTSLSWIMRVQIALDAARG 460
G D L +++EY + G L L H P + T L+ + IA A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGY 520
+ Y+ H+VHRD+ + N L+ KI DFG+++ V T D + +
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYST-DYYRVGGHTMLPIRW 196
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIIS-GKE 552
+ PE + T +SDV++ GVVL+EI + GK+
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ 229
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 345 EILFATEGFSDSSLLGHGTYGSVYYGNIR--NQEVAIKRMTAT------KTKEFMAEMKI 396
+I E F +LG G++G V+ + NQ AIK + + M E ++
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 397 LCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIAL 455
L H L + T++ LF + EY G L H+ ++ S + +I L
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIIL 130
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
GL+++H V+RD+K NILLD KI+DFG+ K + G+A +
Sbjct: 131 ----GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNEFC 180
Query: 516 GTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
GT Y+APE L D ++FGV+L+E++ G+
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 113/254 (44%), Gaps = 26/254 (10%)
Query: 353 FSDSSLLGHGTYGSVYYGNIR--------NQEVAIKRMTATKTKEFMAEMKILCKVHHSN 404
F D +LG G +G V+ ++ + + + M E KIL KVH
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHLH--DPQNRG-QTSLSWIMRVQIALDAARGL 461
+V L T+ +L L+ G ++ H++ D N G Q + QI GL
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGL 302
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
E++H+ + ++RD+K N+LLD +ISD GLA + G+ GT G++
Sbjct: 303 EHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAV---ELKAGQTKTKGYAGTPGFM 356
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNS 581
APE L D +A GV L+E+I+ + R G +N+E L +L
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR-GPFRARGEKVENKE---LKQRVLEQAVTY 412
Query: 582 PDSMSMSSLKDYID 595
PD S +S KD+ +
Sbjct: 413 PDKFSPAS-KDFCE 425
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 106/208 (50%), Gaps = 24/208 (11%)
Query: 358 LLGHGTYGSVYYG-NIR-NQEVAIKRMTATKTKE------FMAEMKILCKVHHSNLVELI 409
+LG G V+ ++R +++VA+K + A ++ F E + ++H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV- 77
Query: 410 GYAATEDEL------FLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
YA E E +++ EY +L+ +H + ++ +++ DA + L +
Sbjct: 78 -YATGEAETPAGPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNF 131
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H++ +HRD+K +NI++ + K+ DFG+A+ + + + V+GT YL+P
Sbjct: 132 SHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 524 EYLTDGLATAKSDVYAFGVVLFEIISGK 551
E A+SDVY+ G VL+E+++G+
Sbjct: 189 EQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 8 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------A 121
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + V S A + GT
Sbjct: 122 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAA---LCGTL 173
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 8 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELA 121
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + T + GT
Sbjct: 122 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTL 173
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 113/254 (44%), Gaps = 26/254 (10%)
Query: 353 FSDSSLLGHGTYGSVYYGNIR--------NQEVAIKRMTATKTKEFMAEMKILCKVHHSN 404
F D +LG G +G V+ ++ + + + M E KIL KVH
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHLH--DPQNRG-QTSLSWIMRVQIALDAARGL 461
+V L T+ +L L+ G ++ H++ D N G Q + QI GL
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGL 302
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
E++H+ + ++RD+K N+LLD +ISD GLA + G+ GT G++
Sbjct: 303 EHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAV---ELKAGQTKTKGYAGTPGFM 356
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNS 581
APE L D +A GV L+E+I+ + R G +N+E L +L
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR-GPFRARGEKVENKE---LKQRVLEQAVTY 412
Query: 582 PDSMSMSSLKDYID 595
PD S +S KD+ +
Sbjct: 413 PDKFSPAS-KDFCE 425
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 113/254 (44%), Gaps = 26/254 (10%)
Query: 353 FSDSSLLGHGTYGSVYYGNIR--------NQEVAIKRMTATKTKEFMAEMKILCKVHHSN 404
F D +LG G +G V+ ++ + + + M E KIL KVH
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHLH--DPQNRG-QTSLSWIMRVQIALDAARGL 461
+V L T+ +L L+ G ++ H++ D N G Q + QI GL
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGL 302
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
E++H+ + ++RD+K N+LLD +ISD GLA + G+ GT G++
Sbjct: 303 EHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAV---ELKAGQTKTKGYAGTPGFM 356
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNS 581
APE L D +A GV L+E+I+ + R G +N+E L +L
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR-GPFRARGEKVENKE---LKQRVLEQAVTY 412
Query: 582 PDSMSMSSLKDYID 595
PD S +S KD+ +
Sbjct: 413 PDKFSPAS-KDFCE 425
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 5 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELA 118
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + V S A + GT
Sbjct: 119 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAA---LCGTL 170
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 316 EVSNPPITIPKALGTDVFDMEKPVVFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIRNQ 375
E +N P+ K + + + KP ++ E F ++G G +G V ++N
Sbjct: 40 ECNNSPLRREKNI-LEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNA 98
Query: 376 EVAI--------KRMTATKTKEFMAEMKILCKVHHSNLVELIGYAATEDE-LFLIYEYAQ 426
+ + + +T F E +L S + + YA +D L+L+ +Y
Sbjct: 99 DKVFAMKILNKWEMLKRAETACFREERDVLVN-GDSKWITTLHYAFQDDNNLYLVMDYYV 157
Query: 427 KGSLKSHLHDPQNRGQTSLS--WIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILL 484
G L + L ++R ++ ++ + IA+D+ L HYVHRDIK NIL+
Sbjct: 158 GGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---------HYVHRDIKPDNILM 208
Query: 485 DSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT-----DGLATAKSDVYA 539
D +++DFG + DG + VGT Y++PE L G + D ++
Sbjct: 209 DMNGHIRLADFG--SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWS 266
Query: 540 FGVVLFEIISGK-----EAIIRTEGMVSKNQERRSLASFMLAALRNSPD 583
GV ++E++ G+ E+++ T G + ++ER + + N+ D
Sbjct: 267 LGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKD 315
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 6 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 65
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------A 119
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + V S T + GT
Sbjct: 120 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDT---LCGTL 171
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 21/201 (10%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIKRMTATKTK------EFMAEMKILCKVHHSNLVELIG 410
LG GT+G V G + +VA+K + K + + E++ L H ++++L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 411 YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
+T ++F++ EY G L ++ R S + QI G++Y H H
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICK-NGRLDEKESRRLFQQIL----SGVDYCHRHM-- 136
Query: 471 HYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGL 530
VHRD+K N+LLD+ AKI+DFGL+ ++ SDGE + G+ Y APE ++ L
Sbjct: 137 -VVHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGE-FLRXSCGSPNYAAPEVISGRL 191
Query: 531 -ATAKSDVYAFGVVLFEIISG 550
A + D+++ GV+L+ ++ G
Sbjct: 192 YAGPEVDIWSSGVILYALLCG 212
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 36/225 (16%)
Query: 353 FSDSSLLGHGTYGSVYYGN--IRNQEVAIKRMTATKTK--EFMAEMKILCKVHHS----- 403
F + ++LG G +G V + ++ AIK++ T+ K ++E+ +L ++H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 404 --------NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIAL 455
N V+ + + LF+ EY + G+L +H Q W + QI L
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQI-L 126
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD--------- 506
+A L YIH +HRD+K NI +D + KI DFGLAK V ++ D
Sbjct: 127 EA---LSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 507 --GEATVTKVVGTFGYLAPEYLT-DGLATAKSDVYAFGVVLFEII 548
+T +GT Y+A E L G K D+Y+ G++ FE+I
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 6 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 65
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------A 119
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + T + GT
Sbjct: 120 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----CHAPSSRRTTLSGTL 171
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 40/268 (14%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQ--EVAIKRM------TATKTKEFMAEMKILCKVHH 402
E F +LLG G++ VY + EVAIK + A + E+KI C++ H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 403 SNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-----PQNRGQTSLSWIMRVQIALDA 457
+++EL Y + ++L+ E G + +L + +N + + I+
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQII-------- 122
Query: 458 ARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT 517
G+ Y+H H +HRD+ SN+LL KI+DFGLA + + T + GT
Sbjct: 123 -TGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT---LCGT 175
Query: 518 FGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK-----EAIIRT-EGMVSKNQERRSLA 571
Y++PE T +SDV++ G + + ++ G+ + + T +V + E S
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFL 235
Query: 572 SFMLAAL------RNSPDSMSMSSLKDY 593
S L RN D +S+SS+ D+
Sbjct: 236 SIEAKDLIHQLLRRNPADRLSLSSVLDH 263
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 104/209 (49%), Gaps = 26/209 (12%)
Query: 356 SSLLGHGTYGSVYYGNIRNQE-----VAIKRMTAT----KTKEFMAEMKILCKVHHSNLV 406
+ ++G G +G VY+G + + + A+K + + +F+ E I+ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 407 ELIGYAA-TEDELFLIYEYAQKGSLKSHL----HDPQNRGQTSLSWIMRVQIALDAARGL 461
L+G +E ++ Y + G L++ + H+P + + L A+G+
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGM 147
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGY 520
+++ +VHRD+ + N +LD F K++DFGLA+ ++ K D T +
Sbjct: 148 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKW 204
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+A E L T KSDV++FGV+L+E+++
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 31 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 90
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------A 144
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + + + GT
Sbjct: 145 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD-----LCGTL 196
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 117/236 (49%), Gaps = 42/236 (17%)
Query: 348 FATEGFSDSSLLGHGTYGSVY----YGNIRNQ---EVAIKRMT----ATKTKEFMAEMKI 396
F E +LG G +G V YG + +VA+K + +++ + M+E+K+
Sbjct: 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM 101
Query: 397 LCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL-------------HDPQNRGQ 442
+ ++ H N+V L+G ++LI+EY G L ++L ++ Q R +
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 161
Query: 443 TS-----LSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGL 497
L++ + A A+G+E++ + VHRD+ + N+L+ KI DFGL
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC---VHRDLAARNVLVTHGKVVKICDFGL 218
Query: 498 AKLVGKTSD----GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
A+ + S+ G A + ++APE L +G+ T KSDV+++G++L+EI S
Sbjct: 219 ARDIMSDSNYVVRGNARLP-----VKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 92/182 (50%), Gaps = 15/182 (8%)
Query: 375 QEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL 434
+E+ I RM++ + +E E+ +L + H N+V+ L+++ +Y + G L +
Sbjct: 55 KEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRI 114
Query: 435 HDPQN---RGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAK 491
+ + + L W VQI L L+++H+ +HRDIKS NI L +
Sbjct: 115 NAQKGVLFQEDQILDWF--VQICL----ALKHVHDRK---ILHRDIKSQNIFLTKDGTVQ 165
Query: 492 ISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+ DFG+A+++ T + +GT YL+PE + KSD++A G VL+E+ + K
Sbjct: 166 LGDFGIARVLNSTVE---LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222
Query: 552 EA 553
A
Sbjct: 223 HA 224
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 103/206 (50%), Gaps = 20/206 (9%)
Query: 358 LLGHGTYGSVYYG-NIRN-QEVAIKRMTATKTKE------FMAEMKILCKVHHSNLVELI 409
+LG G V+ ++R+ ++VA+K + A ++ F E + ++H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 410 GYAATEDEL----FLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
E +++ EY +L+ +H + ++ +++ DA + L + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSH 133
Query: 466 EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEY 525
++ +HRD+K +NIL+ + K+ DFG+A+ + + + V+GT YL+PE
Sbjct: 134 QNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 526 LTDGLATAKSDVYAFGVVLFEIISGK 551
A+SDVY+ G VL+E+++G+
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 359 LGHGTYGSVYYGNIRNQ----EVAIKRMT----ATKTKEFMAEMKILCKVHHSNLVELIG 410
LG G +GSV G R + +VAIK + T+E M E +I+ ++ + +V LIG
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 411 YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
E L L+ E A G L L R + +S + ++ + G++Y+ E
Sbjct: 78 VCQAE-ALMLVMEMAGGGPLHKFLVG--KREEIPVSNV--AELLHQVSMGMKYLEE---K 129
Query: 471 HYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF--GYLAPEYLTD 528
++VHRD+ + N+LL + AKISDFGL+K +G +D + G + + APE +
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSKALG--ADDSYYTARSAGKWPLKWYAPECINF 187
Query: 529 GLATAKSDVYAFGVVLFEIIS 549
+++SDV+++GV ++E +S
Sbjct: 188 RKFSSRSDVWSYGVTMWEALS 208
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 7 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 66
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELA 120
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI++FG + + T + GT
Sbjct: 121 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS-----VHAPSSRRTTLCGTL 172
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 10 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------A 123
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + T + GT
Sbjct: 124 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRTTLCGTL 175
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + K D+++ GV+ +E + GK
Sbjct: 176 DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 10 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 120
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 121 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTA 176
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 177 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 101/199 (50%), Gaps = 19/199 (9%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIKRMT---ATKTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G G+VY QEVAI++M K + + E+ ++ + + N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 414 TEDELFLIYEYAQKGSLKSHLHDP-QNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHY 472
DEL+++ EY GSL + + + GQ + + + + LE++H +
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-------AVCRECLQALEFLHSN---QV 137
Query: 473 VHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLAT 532
+HRDIKS NILL K++DFG + + ++ +++VGT ++APE +T
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFC---AQITPEQSKRSEMVGTPYWMAPEVVTRKAYG 194
Query: 533 AKSDVYAFGVVLFEIISGK 551
K D+++ G++ E+I G+
Sbjct: 195 PKVDIWSLGIMAIEMIEGE 213
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 20/216 (9%)
Query: 345 EILFATEGFSDSSLLGHGTYGSVYYGNIR--NQEVAIKRMTAT------KTKEFMAEMKI 396
+I E F +LG G++G V+ + NQ AIK + + M E ++
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 397 LCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIAL 455
L H L + T++ LF + EY G L H+ + ++ A
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY-----AA 125
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
+ GL+++H V+RD+K NILLD KI+DFG+ K + G+A
Sbjct: 126 EIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNXFC 179
Query: 516 GTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
GT Y+APE L D ++FGV+L+E++ G+
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 7 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 66
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELA 120
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + + GT
Sbjct: 121 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLCGTL 172
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 138/301 (45%), Gaps = 38/301 (12%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRN-------QEVAIKRMTATKTKEFMAEMKILCKVH 401
++ F LG+GTY +VY G + +EV + T + + E+ ++ ++
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTA-IREISLMKELK 61
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQT----SLSWIMRVQIALDA 457
H N+V L TE++L L++E+ LK ++ D + G T L+ + Q L
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMD-NDLKKYM-DSRTVGNTPRGLELNLVKYFQWQL-- 117
Query: 458 ARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT 517
+GL + HE+ +HRD+K N+L++ + K+ DFGLA+ G + T + V T
Sbjct: 118 LQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN---TFSSEVVT 171
Query: 518 FGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLA 576
Y AP+ L + S D+++ G +L E+I+GK T N E + F +
Sbjct: 172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT------NDEEQLKLIFDIM 225
Query: 577 ALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPI--------LRPDM 628
N S++ L Y +PN+ P D + K+ +D + + L PDM
Sbjct: 226 GTPNESLWPSVTKLPKY-NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDM 284
Query: 629 K 629
+
Sbjct: 285 R 285
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 8 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELA 121
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI++FG + + T + GT
Sbjct: 122 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS-----VHAPSSRRTTLCGTL 173
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 87
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFY-----TAEIV 142
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 143 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANSFVGTA 198
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A+ SD++A G +++++++G
Sbjct: 199 QYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 9 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 119
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 120 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTA 175
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 176 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 19/199 (9%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIKRMT---ATKTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G G+VY QEVAI++M K + + E+ ++ + + N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 414 TEDELFLIYEYAQKGSLKSHLHDP-QNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHY 472
DEL+++ EY GSL + + + GQ + + + + LE++H +
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-------AVCRECLQALEFLHSN---QV 137
Query: 473 VHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLAT 532
+HRDIKS NILL K++DFG + +T +VGT ++APE +T
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST---MVGTPYWMAPEVVTRKAYG 194
Query: 533 AKSDVYAFGVVLFEIISGK 551
K D+++ G++ E+I G+
Sbjct: 195 PKVDIWSLGIMAIEMIEGE 213
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 356 SSLLGHGTYGSVYYGNIRNQE-----VAIKRMTAT----KTKEFMAEMKILCKVHHSNLV 406
+ ++G G +G VY+G + + + A+K + + +F+ E I+ H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 407 ELIGYAA-TEDELFLIYEYAQKGSLKSHL----HDPQNRGQTSLSWIMRVQIALDAARGL 461
L+G +E ++ Y + G L++ + H+P + + L A+G+
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--------LIGFGLQVAKGM 205
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGY 520
+++ +VHRD+ + N +LD F K++DFGLA+ + K D T +
Sbjct: 206 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+A E L T KSDV++FGV+L+E+++
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 7 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 117
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 118 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTA 173
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 174 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 356 SSLLGHGTYGSVYYGNIRNQE-----VAIKRMTAT----KTKEFMAEMKILCKVHHSNLV 406
+ ++G G +G VY+G + + + A+K + + +F+ E I+ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 407 ELIGYAA-TEDELFLIYEYAQKGSLKSHL----HDPQNRGQTSLSWIMRVQIALDAARGL 461
L+G +E ++ Y + G L++ + H+P + + L A+G+
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGM 144
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGY 520
+++ +VHRD+ + N +LD F K++DFGLA+ + K D T +
Sbjct: 145 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 201
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+A E L T KSDV++FGV+L+E+++
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 5 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELA 118
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + + GT
Sbjct: 119 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLCGTL 170
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 8 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------A 121
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + + + GT
Sbjct: 122 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD-----LCGTL 173
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 103/206 (50%), Gaps = 20/206 (9%)
Query: 358 LLGHGTYGSVYYG-NIRN-QEVAIKRMTATKTKE------FMAEMKILCKVHHSNLVELI 409
+LG G V+ ++R+ ++VA+K + A ++ F E + ++H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 410 GYAATEDEL----FLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
E +++ EY +L+ +H + ++ +++ DA + L + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSH 133
Query: 466 EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEY 525
++ +HRD+K +NI++ + K+ DFG+A+ + + + V+GT YL+PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 526 LTDGLATAKSDVYAFGVVLFEIISGK 551
A+SDVY+ G VL+E+++G+
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 103/206 (50%), Gaps = 20/206 (9%)
Query: 358 LLGHGTYGSVYYG-NIRN-QEVAIKRMTATKTKE------FMAEMKILCKVHHSNLVELI 409
+LG G V+ ++R+ ++VA+K + A ++ F E + ++H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 410 GYAATEDEL----FLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
E +++ EY +L+ +H + ++ +++ DA + L + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSH 133
Query: 466 EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEY 525
++ +HRD+K +NI++ + K+ DFG+A+ + + + V+GT YL+PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 526 LTDGLATAKSDVYAFGVVLFEIISGK 551
A+SDVY+ G VL+E+++G+
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 8 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 118
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 119 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTA 174
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+A E F LG G +G+VY + + +A+K + + + + E++I
Sbjct: 8 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELA 121
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL SA KI+DFG + + + GT
Sbjct: 122 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-----VHAPSSRRXXLCGTL 173
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
YL PE + + K D+++ GV+ +E + GK
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 356 SSLLGHGTYGSVYYGNIRNQE-----VAIKRMTAT----KTKEFMAEMKILCKVHHSNLV 406
+ ++G G +G VY+G + + + A+K + + +F+ E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 407 ELIGYAA-TEDELFLIYEYAQKGSLKSHL----HDPQNRGQTSLSWIMRVQIALDAARGL 461
L+G +E ++ Y + G L++ + H+P + + L A+G+
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGM 146
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGY 520
+++ +VHRD+ + N +LD F K++DFGLA+ + K D T +
Sbjct: 147 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+A E L T KSDV++FGV+L+E+++
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 356 SSLLGHGTYGSVYYGNIRNQE-----VAIKRMTAT----KTKEFMAEMKILCKVHHSNLV 406
+ ++G G +G VY+G + + + A+K + + +F+ E I+ H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 407 ELIGYAA-TEDELFLIYEYAQKGSLKSHL----HDPQNRGQTSLSWIMRVQIALDAARGL 461
L+G +E ++ Y + G L++ + H+P + + L A+G+
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGM 151
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGY 520
+++ +VHRD+ + N +LD F K++DFGLA+ + K D T +
Sbjct: 152 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 208
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+A E L T KSDV++FGV+L+E+++
Sbjct: 209 MALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 356 SSLLGHGTYGSVYYGNIRNQE-----VAIKRMTAT----KTKEFMAEMKILCKVHHSNLV 406
+ ++G G +G VY+G + + + A+K + + +F+ E I+ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 407 ELIGYAA-TEDELFLIYEYAQKGSLKSHL----HDPQNRGQTSLSWIMRVQIALDAARGL 461
L+G +E ++ Y + G L++ + H+P + + L A+G+
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGM 147
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGY 520
+++ +VHRD+ + N +LD F K++DFGLA+ + K D T +
Sbjct: 148 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 204
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+A E L T KSDV++FGV+L+E+++
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 356 SSLLGHGTYGSVYYGNIRNQE-----VAIKRMTAT----KTKEFMAEMKILCKVHHSNLV 406
+ ++G G +G VY+G + + + A+K + + +F+ E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 407 ELIGYAA-TEDELFLIYEYAQKGSLKSHL----HDPQNRGQTSLSWIMRVQIALDAARGL 461
L+G +E ++ Y + G L++ + H+P + + L A+G+
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGM 146
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGY 520
+++ +VHRD+ + N +LD F K++DFGLA+ + K D T +
Sbjct: 147 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+A E L T KSDV++FGV+L+E+++
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 87
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 142
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 143 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTA 198
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 19/199 (9%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIKRMT---ATKTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G G+VY QEVAI++M K + + E+ ++ + + N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 414 TEDELFLIYEYAQKGSLKSHLHDP-QNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHY 472
DEL+++ EY GSL + + + GQ + + + + LE++H +
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-------AVCRECLQALEFLHSN---QV 137
Query: 473 VHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLAT 532
+HRDIKS NILL K++DFG + + ++ + +VGT ++APE +T
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFC---AQITPEQSKRSXMVGTPYWMAPEVVTRKAYG 194
Query: 533 AKSDVYAFGVVLFEIISGK 551
K D+++ G++ E+I G+
Sbjct: 195 PKVDIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 19/199 (9%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIKRMT---ATKTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G G+VY QEVAI++M K + + E+ ++ + + N+V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 414 TEDELFLIYEYAQKGSLKSHLHDP-QNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHY 472
DEL+++ EY GSL + + + GQ + + + + LE++H +
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-------AVCRECLQALEFLHSN---QV 138
Query: 473 VHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLAT 532
+HRDIKS NILL K++DFG + + ++ + +VGT ++APE +T
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFC---AQITPEQSKRSXMVGTPYWMAPEVVTRKAYG 195
Query: 533 AKSDVYAFGVVLFEIISGK 551
K D+++ G++ E+I G+
Sbjct: 196 PKVDIWSLGIMAIEMIEGE 214
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 33 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 88
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 89 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 143
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 144 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTA 199
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 103/206 (50%), Gaps = 20/206 (9%)
Query: 358 LLGHGTYGSVYYG-NIR-NQEVAIKRMTATKTKE------FMAEMKILCKVHHSNLVELI 409
+LG G V+ ++R +++VA+K + A ++ F E + ++H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 410 GYAATEDEL----FLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
E +++ EY +L+ +H + ++ +++ DA + L + H
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSH 133
Query: 466 EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEY 525
++ +HRD+K +NI++ + K+ DFG+A+ + + + V+GT YL+PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 526 LTDGLATAKSDVYAFGVVLFEIISGK 551
A+SDVY+ G VL+E+++G+
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 33 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 88
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 89 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 143
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 144 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANSFVGTA 199
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 200 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 37 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 92
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 93 RLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 147
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 148 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTA 203
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 204 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 26/209 (12%)
Query: 356 SSLLGHGTYGSVYYGNIRNQE-----VAIKRMTAT----KTKEFMAEMKILCKVHHSNLV 406
+ ++G G +G VY+G + + + A+K + + +F+ E I+ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 407 ELIGYA-ATEDELFLIYEYAQKGSLKSHL----HDPQNRGQTSLSWIMRVQIALDAARGL 461
L+G +E ++ Y + G L++ + H+P + + L A+G+
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--------LIGFGLQVAKGM 145
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGY 520
+Y+ +VHRD+ + N +LD F K++DFGLA+ + K T +
Sbjct: 146 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKW 202
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+A E L T KSDV++FGV+L+E+++
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 30 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 85
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 86 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 140
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 141 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTA 196
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 30 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 85
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 86 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 140
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 141 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTA 196
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 87
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 142
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 143 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTA 198
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 14 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 69
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 70 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 124
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 125 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTA 180
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 181 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 35 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 90
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 91 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 145
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 146 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTA 201
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 202 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 30 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 85
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 86 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 140
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 141 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANAFVGTA 196
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 87
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 142
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 143 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTA 198
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 29 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 84
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 85 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 139
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 140 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTA 195
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 109/217 (50%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG------NIRNQEVAIKRMTATKTK----EFMAEMK 395
IL TE +LG G +G+VY G VAIK + T EFM E
Sbjct: 34 ILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL 92
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
I+ + H +LV L+G + + L+ + G L ++H+ ++ Q L+W +++
Sbjct: 93 IMASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI-- 149
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLV-GKTSDGEATVT 512
A+G+ Y+ E VHRD+ + N+L+ S KI+DFGLA+L+ G + A
Sbjct: 150 ----AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGG 202
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
K+ ++A E + T +SDV+++GV ++E+++
Sbjct: 203 KM--PIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 87
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 142
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 143 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTA 198
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 199 QYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 29 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 84
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 85 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 139
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 140 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANSFVGTA 195
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 29/217 (13%)
Query: 359 LGHGTYGSVYYGNIRN----------QEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
LG G +G V+ N A+K + + ++F E ++L + H ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHL--HDPQNR----------GQTSLSWIMRVQIALD 456
G L +++EY + G L L H P + G L ++ V A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV--ASQ 166
Query: 457 AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG 516
A G+ Y+ H+VHRD+ + N L+ KI DFG+++ + ++D + +
Sbjct: 167 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI-YSTDYYRVGGRTML 222
Query: 517 TFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS-GKE 552
++ PE + T +SDV++FGVVL+EI + GK+
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 259
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 29/217 (13%)
Query: 359 LGHGTYGSVYYGNIRN----------QEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
LG G +G V+ N A+K + + ++F E ++L + H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHL--HDPQNR----------GQTSLSWIMRVQIALD 456
G L +++EY + G L L H P + G L ++ V A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV--ASQ 143
Query: 457 AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG 516
A G+ Y+ H+VHRD+ + N L+ KI DFG+++ + ++D + +
Sbjct: 144 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI-YSTDYYRVGGRTML 199
Query: 517 TFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS-GKE 552
++ PE + T +SDV++FGVVL+EI + GK+
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 236
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ +V + +E+A R A K E E ++
Sbjct: 32 EDFKFGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 87
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 88 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 142
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 143 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTA 198
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 199 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 29/217 (13%)
Query: 359 LGHGTYGSVYYGNIRN----------QEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
LG G +G V+ N A+K + + ++F E ++L + H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHL--HDPQNR----------GQTSLSWIMRVQIALD 456
G L +++EY + G L L H P + G L ++ V A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV--ASQ 137
Query: 457 AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG 516
A G+ Y+ H+VHRD+ + N L+ KI DFG+++ + ++D + +
Sbjct: 138 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI-YSTDYYRVGGRTML 193
Query: 517 TFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS-GKE 552
++ PE + T +SDV++FGVVL+EI + GK+
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 230
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 353 FSDSSLLGHGTYGSV----------YYG-NIRNQEVAIKRMTATKTKEFMAEMKILCKVH 401
F LLG GT+G V YY I +EV + + T + E ++L
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRVLQNSR 68
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H L L T D L + EYA G L HL + + + + L
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY-----GAEIVSAL 123
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+Y+H ++ + V+RD+K N++LD KI+DFGL K DG AT+ GT YL
Sbjct: 124 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDG-ATMKXFCGTPEYL 178
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGK 551
APE L D D + GVV++E++ G+
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 103/206 (50%), Gaps = 20/206 (9%)
Query: 358 LLGHGTYGSVYYG-NIR-NQEVAIKRMTATKTKE------FMAEMKILCKVHHSNLVELI 409
+LG G V+ ++R +++VA+K + A ++ F E + ++H +V +
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 95
Query: 410 GYAATEDEL----FLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
E +++ EY +L+ +H + ++ +++ DA + L + H
Sbjct: 96 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSH 150
Query: 466 EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEY 525
++ +HRD+K +NI++ + K+ DFG+A+ + + + V+GT YL+PE
Sbjct: 151 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 526 LTDGLATAKSDVYAFGVVLFEIISGK 551
A+SDVY+ G VL+E+++G+
Sbjct: 208 ARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 109/217 (50%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG------NIRNQEVAIKRMTATKTK----EFMAEMK 395
IL TE +LG G +G+VY G VAIK + T EFM E
Sbjct: 11 ILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL 69
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
I+ + H +LV L+G + + L+ + G L ++H+ ++ Q L+W +++
Sbjct: 70 IMASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI-- 126
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLV-GKTSDGEATVT 512
A+G+ Y+ E VHRD+ + N+L+ S KI+DFGLA+L+ G + A
Sbjct: 127 ----AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGG 179
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
K+ ++A E + T +SDV+++GV ++E+++
Sbjct: 180 KM--PIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+ E F LG G +G+VY R + +A+K + T+ + + E++I
Sbjct: 9 WTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH 68
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT------ELA 122
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL S KI+DFG + + T + GT
Sbjct: 123 NALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWS-----VHAPSSRRTTLCGTL 174
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
YL PE + + K D+++ GV+ +E + G
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 353 FSDSSLLGHGTYGSV----------YYG-NIRNQEVAIKRMTATKTKEFMAEMKILCKVH 401
F LLG GT+G V YY I +EV + + T + E ++L
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRVLQNSR 66
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H L L T D L + EYA G L HL + + + + L
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY-----GAEIVSAL 121
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+Y+H ++ + V+RD+K N++LD KI+DFGL K DG AT+ GT YL
Sbjct: 122 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDG-ATMKXFCGTPEYL 176
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGK 551
APE L D D + GVV++E++ G+
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 114/245 (46%), Gaps = 31/245 (12%)
Query: 353 FSDSSLLGHGTYGSVYY-----GNIRNQEVAIKRMTATKTK-----EFMAEMKILCKVHH 402
F +LG G++G V+ G+ Q A+K + K E IL +V+H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 403 SNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLS-WIMRVQIALDAARGL 461
+V+L TE +L+LI ++ + G L + L + + ++ + +ALD L
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 145
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
I+ RD+K NILLD K++DFGL+K ++ D E GT Y+
Sbjct: 146 GIIY---------RDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYM 193
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNS 581
APE + T +D ++FGV++FE+++G + + ++R+ + +L A
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTGT--------LPFQGKDRKETMTMILKAKLGM 245
Query: 582 PDSMS 586
P +S
Sbjct: 246 PQFLS 250
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 353 FSDSSLLGHGTYGSV----------YYG-NIRNQEVAIKRMTATKTKEFMAEMKILCKVH 401
F LLG GT+G V YY I +EV + + T + E ++L
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRVLQNSR 67
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H L L T D L + EYA G L HL + + + + L
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY-----GAEIVSAL 122
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+Y+H ++ + V+RD+K N++LD KI+DFGL K DG AT+ GT YL
Sbjct: 123 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDG-ATMKXFCGTPEYL 177
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGK 551
APE L D D + GVV++E++ G+
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 353 FSDSSLLGHGTYGSV----------YYG-NIRNQEVAIKRMTATKTKEFMAEMKILCKVH 401
F LLG GT+G V YY I +EV + + T + E ++L
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRVLQNSR 209
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H L L T D L + EYA G L HL + + + + L
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY-----GAEIVSAL 264
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+Y+H ++ + V+RD+K N++LD KI+DFGL K DG AT+ GT YL
Sbjct: 265 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDG-ATMKTFCGTPEYL 319
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGK 551
APE L D D + GVV++E++ G+
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 114/245 (46%), Gaps = 31/245 (12%)
Query: 353 FSDSSLLGHGTYGSVYY-----GNIRNQEVAIKRMTATKTK-----EFMAEMKILCKVHH 402
F +LG G++G V+ G+ Q A+K + K E IL +V+H
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 403 SNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLS-WIMRVQIALDAARGL 461
+V+L TE +L+LI ++ + G L + L + + ++ + +ALD L
Sbjct: 87 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 146
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
I+ RD+K NILLD K++DFGL+K ++ D E GT Y+
Sbjct: 147 GIIY---------RDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYM 194
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNS 581
APE + T +D ++FGV++FE+++G + + ++R+ + +L A
Sbjct: 195 APEVVNRRGHTQSADWWSFGVLMFEMLTGT--------LPFQGKDRKETMTMILKAKLGM 246
Query: 582 PDSMS 586
P +S
Sbjct: 247 PQFLS 251
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 353 FSDSSLLGHGTYGSV----------YYG-NIRNQEVAIKRMTATKTKEFMAEMKILCKVH 401
F LLG GT+G V YY I +EV + + T + E ++L
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRVLQNSR 206
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H L L T D L + EYA G L HL + + + + L
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY-----GAEIVSAL 261
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+Y+H ++ + V+RD+K N++LD KI+DFGL K DG AT+ GT YL
Sbjct: 262 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDG-ATMKTFCGTPEYL 316
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGK 551
APE L D D + GVV++E++ G+
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 114/245 (46%), Gaps = 31/245 (12%)
Query: 353 FSDSSLLGHGTYGSVYY-----GNIRNQEVAIKRMTATKTK-----EFMAEMKILCKVHH 402
F +LG G++G V+ G+ Q A+K + K E IL +V+H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 403 SNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLS-WIMRVQIALDAARGL 461
+V+L TE +L+LI ++ + G L + L + + ++ + +ALD L
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 145
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
I+ RD+K NILLD K++DFGL+K ++ D E GT Y+
Sbjct: 146 GIIY---------RDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYM 193
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNS 581
APE + T +D ++FGV++FE+++G + + ++R+ + +L A
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTGT--------LPFQGKDRKETMTMILKAKLGM 245
Query: 582 PDSMS 586
P +S
Sbjct: 246 PQFLS 250
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 140/314 (44%), Gaps = 48/314 (15%)
Query: 344 DEILFATEGFSDSSLLGHGTYG--SVYYGNIRN----QEVAIKRMTA----TKTKEFMAE 393
D +F LG G +G S+Y + N + VA+K + A + E
Sbjct: 7 DPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQE 66
Query: 394 MKILCKVHHSNLVELIGYAATEDE--LFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRV 451
+ IL ++H ++++ G + E L L+ EY GSL+ +L P++ S+ +
Sbjct: 67 IDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRH----SIGLAQLL 120
Query: 452 QIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK-------T 504
A G+ Y+H HY+HR++ + N+LLD+ KI DFGLAK V +
Sbjct: 121 LFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 177
Query: 505 SDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKN 564
DG++ V F Y APE L + SDV++FGV L+E+++ ++ ++ +K
Sbjct: 178 EDGDSPV------FWY-APECLKEYKFYYASDVWSFGVTLYELLTHCDS---SQSPPTKF 227
Query: 565 QERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPIL 624
E +A + LR L + ++ P C ++ L K C + +
Sbjct: 228 LELIGIAQGQMTVLR----------LTELLERGERLPRPDKCPCEVYHLMKNCWETEASF 277
Query: 625 RPDMKQVVISLSQI 638
RP + ++ L +
Sbjct: 278 RPTFENLIPILKTV 291
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 140/314 (44%), Gaps = 48/314 (15%)
Query: 344 DEILFATEGFSDSSLLGHGTYG--SVYYGNIRN----QEVAIKRMTA----TKTKEFMAE 393
D +F LG G +G S+Y + N + VA+K + A + E
Sbjct: 7 DPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQE 66
Query: 394 MKILCKVHHSNLVELIGYAATEDE--LFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRV 451
+ IL ++H ++++ G + E L L+ EY GSL+ +L P++ S+ +
Sbjct: 67 IDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRH----SIGLAQLL 120
Query: 452 QIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK-------T 504
A G+ Y+H HY+HR++ + N+LLD+ KI DFGLAK V +
Sbjct: 121 LFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 177
Query: 505 SDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKN 564
DG++ V F Y APE L + SDV++FGV L+E+++ ++ ++ +K
Sbjct: 178 EDGDSPV------FWY-APECLKEYKFYYASDVWSFGVTLYELLTHCDS---SQSPPTKF 227
Query: 565 QERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPIL 624
E +A + LR L + ++ P C ++ L K C + +
Sbjct: 228 LELIGIAQGQMTVLR----------LTELLERGERLPRPDKCPCEVYHLMKNCWETEASF 277
Query: 625 RPDMKQVVISLSQI 638
RP + ++ L +
Sbjct: 278 RPTFENLIPILKTV 291
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 132/292 (45%), Gaps = 34/292 (11%)
Query: 359 LGHGTYG--SVYYGNIRN----QEVAIKRMTATKTKE----FMAEMKILCKVHHSNLVEL 408
LG G +G S+Y + N + VA+K + A + + E+ IL ++H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 409 IGYA--ATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G A L L+ EY GSL+ +L P++ S+ + A G+ Y+H
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL--PRH----SIGLAQLLLFAQQICEGMAYLH- 151
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL 526
HY+HRD+ + N+LLD+ KI DFGLAK V + + + APE L
Sbjct: 152 --AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL 209
Query: 527 TDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMS 586
+ SDV++FGV L+E+++ ++ ++ +K E +A + LR
Sbjct: 210 KEYKFYYASDVWSFGVTLYELLTHCDS---SQSPPTKFLELIGIAQGQMTVLR------- 259
Query: 587 MSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
L + ++ P C ++ L K C + + RP + ++ L +
Sbjct: 260 ---LTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 25/243 (10%)
Query: 359 LGHGTYGSVYYGNIRN--QEVAIKRMTATKTKE---FMAEMKILCKVHHSNLVELIGYAA 413
+G G+ G V +R+ + VA+K+M K + E+ I+ H N+VE+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 414 TEDELFLIYEYAQKGSLKSHL-HDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHY 472
DEL+++ E+ + G+L + H N Q + + L + L +H
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQG---V 146
Query: 473 VHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLAT 532
+HRDIKS +ILL R K+SDFG V K +VGT ++APE ++
Sbjct: 147 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX---LVGTPYWMAPELISRLPYG 203
Query: 533 AKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSLKD 592
+ D+++ G+++ E++ G+ + + R +L + + SP SLK
Sbjct: 204 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSP------SLKG 257
Query: 593 YID 595
++D
Sbjct: 258 FLD 260
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 26/209 (12%)
Query: 356 SSLLGHGTYGSVYYGNIRNQE-----VAIKRMTAT----KTKEFMAEMKILCKVHHSNLV 406
+ ++G G +G VY+G + + + A+K + + +F+ E I+ H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 407 ELIGYAA-TEDELFLIYEYAQKGSLKSHL----HDPQNRGQTSLSWIMRVQIALDAARGL 461
L+G +E ++ Y + G L++ + H+P + + L A+G+
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGM 164
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGY 520
+Y+ +VHRD+ + N +LD F K++DFGLA+ + K T +
Sbjct: 165 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 221
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+A E L T KSDV++FGV+L+E+++
Sbjct: 222 MALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 21/201 (10%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKTK------EFMAEMKILCKVHHSNLVELIG 410
LG GT+G V G + +VA+K + K + + E++ L H ++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 411 YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
+T + F++ EY G L ++ G+ R+ + +A ++Y H H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYI---CKHGRVEEMEARRLFQQILSA--VDYCHRHM-- 131
Query: 471 HYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGL 530
VHRD+K N+LLD+ AKI+DFGL+ ++ SDGE T G+ Y APE ++ L
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRTS-CGSPNYAAPEVISGRL 186
Query: 531 -ATAKSDVYAFGVVLFEIISG 550
A + D+++ GV+L+ ++ G
Sbjct: 187 YAGPEVDIWSCGVILYALLCG 207
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 25/243 (10%)
Query: 359 LGHGTYGSVYYGNIRN--QEVAIKRMTATKTKE---FMAEMKILCKVHHSNLVELIGYAA 413
+G G+ G V +R+ + VA+K+M K + E+ I+ H N+VE+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 414 TEDELFLIYEYAQKGSLKSHL-HDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHY 472
DEL+++ E+ + G+L + H N Q + + L + L +H
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQG---V 148
Query: 473 VHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLAT 532
+HRDIKS +ILL R K+SDFG V K +VGT ++APE ++
Sbjct: 149 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX---LVGTPYWMAPELISRLPYG 205
Query: 533 AKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSLKD 592
+ D+++ G+++ E++ G+ + + R +L + + SP SLK
Sbjct: 206 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSP------SLKG 259
Query: 593 YID 595
++D
Sbjct: 260 FLD 262
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 36/240 (15%)
Query: 338 PVVFTYDEIL-FATEGFSDSSLLGHGTYGSVY----YGNIRNQ---EVAIKRMTAT---- 385
P Y+E F LG G +G V +G + +VA+K + +T
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 386 KTKEFMAEMKILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL---------- 434
+ + M+E+KI+ + H N+V L+G + +I EY G L + L
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEY 151
Query: 435 -HDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
++P + + LS + + A+G+ ++ + +HRD+ + N+LL + AKI
Sbjct: 152 SYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIG 208
Query: 494 DFGLAKLVGKTSD----GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
DFGLA+ + S+ G A + ++APE + D + T +SDV+++G++L+EI S
Sbjct: 209 DFGLARDIMNDSNYIVKGNARL-----PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 26/209 (12%)
Query: 356 SSLLGHGTYGSVYYGNIRNQE-----VAIKRMTAT----KTKEFMAEMKILCKVHHSNLV 406
+ ++G G +G VY+G + + + A+K + + +F+ E I+ H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 407 ELIGYA-ATEDELFLIYEYAQKGSLKSHL----HDPQNRGQTSLSWIMRVQIALDAARGL 461
L+G +E ++ Y + G L++ + H+P + + L A+G+
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGM 138
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGY 520
+Y+ +VHRD+ + N +LD F K++DFGLA+ + K T +
Sbjct: 139 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 195
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+A E L T KSDV++FGV+L+E+++
Sbjct: 196 MALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 19/199 (9%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIKRMT---ATKTKEFMAEMKILCKVHHSNLVELIGYAA 413
+G G G+VY QEVAI++M K + + E+ ++ + + N+V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 414 TEDELFLIYEYAQKGSLKSHLHDP-QNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHY 472
DEL+++ EY GSL + + + GQ + + + + LE++H +
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-------AVCRECLQALEFLHSN---QV 138
Query: 473 VHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLAT 532
+HR+IKS NILL K++DFG + +T +VGT ++APE +T
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST---MVGTPYWMAPEVVTRKAYG 195
Query: 533 AKSDVYAFGVVLFEIISGK 551
K D+++ G++ E+I G+
Sbjct: 196 PKVDIWSLGIMAIEMIEGE 214
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 25/243 (10%)
Query: 359 LGHGTYGSVYYGNIRN--QEVAIKRMTATKTKE---FMAEMKILCKVHHSNLVELIGYAA 413
+G G+ G V +R+ + VA+K+M K + E+ I+ H N+VE+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 414 TEDELFLIYEYAQKGSLKSHL-HDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHY 472
DEL+++ E+ + G+L + H N Q + + L + L +H
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQG---V 137
Query: 473 VHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLAT 532
+HRDIKS +ILL R K+SDFG V K +VGT ++APE ++
Sbjct: 138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX---LVGTPYWMAPELISRLPYG 194
Query: 533 AKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSLKD 592
+ D+++ G+++ E++ G+ + + R +L + + SP SLK
Sbjct: 195 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSP------SLKG 248
Query: 593 YID 595
++D
Sbjct: 249 FLD 251
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 26/209 (12%)
Query: 356 SSLLGHGTYGSVYYGNIRNQE-----VAIKRMTAT----KTKEFMAEMKILCKVHHSNLV 406
+ ++G G +G VY+G + + + A+K + + +F+ E I+ H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 407 ELIGYAA-TEDELFLIYEYAQKGSLKSHL----HDPQNRGQTSLSWIMRVQIALDAARGL 461
L+G +E ++ Y + G L++ + H+P + + L A+G+
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGM 165
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGY 520
+Y+ +VHRD+ + N +LD F K++DFGLA+ + K T +
Sbjct: 166 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 222
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+A E L T KSDV++FGV+L+E+++
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 25/212 (11%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE------------FMAEMKILC 398
E F +LG G++ + + +E+A R A K E E ++
Sbjct: 30 EDFKFGKILGEGSFST----TVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 85
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H V+L +++L+ YA+ G L ++ + +T + +
Sbjct: 86 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIV 140
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
LEY+H +HRD+K NILL+ +I+DFG AK++ S +A VGT
Sbjct: 141 SALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-QARANXFVGTA 196
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y++PE LT+ A SD++A G +++++++G
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 347 LFATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCK 399
L E F +G GTYG VY + + VA+K++ E + E+ +L +
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR 459
++H N+V+L+ TE++L+L++E+ + LK + T + + +
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQ 118
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
GL + H H +HRD+K N+L+++ K++DFGLA+ G T T V T
Sbjct: 119 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYTHEVVTLW 172
Query: 520 YLAPEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
Y APE L + D+++ G + E+++ +
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 26/209 (12%)
Query: 356 SSLLGHGTYGSVYYGNIRNQE-----VAIKRMTAT----KTKEFMAEMKILCKVHHSNLV 406
+ ++G G +G VY+G + + + A+K + + +F+ E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 407 ELIGYAA-TEDELFLIYEYAQKGSLKSHL----HDPQNRGQTSLSWIMRVQIALDAARGL 461
L+G +E ++ Y + G L++ + H+P + + L A+G+
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGM 146
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGY 520
+Y+ +VHRD+ + N +LD F K++DFGLA+ + K T +
Sbjct: 147 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+A E L T KSDV++FGV+L+E+++
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 25/243 (10%)
Query: 359 LGHGTYGSVYYGNIRN--QEVAIKRMTATKTKE---FMAEMKILCKVHHSNLVELIGYAA 413
+G G+ G V +R+ + VA+K+M K + E+ I+ H N+VE+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 414 TEDELFLIYEYAQKGSLKSHL-HDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHY 472
DEL+++ E+ + G+L + H N Q + + L + L +H
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQG---V 141
Query: 473 VHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLAT 532
+HRDIKS +ILL R K+SDFG V K +VGT ++APE ++
Sbjct: 142 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX---LVGTPYWMAPELISRLPYG 198
Query: 533 AKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSLKD 592
+ D+++ G+++ E++ G+ + + R +L + + SP SLK
Sbjct: 199 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSP------SLKG 252
Query: 593 YID 595
++D
Sbjct: 253 FLD 255
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 26/209 (12%)
Query: 356 SSLLGHGTYGSVYYGNIRNQE-----VAIKRMTAT----KTKEFMAEMKILCKVHHSNLV 406
+ ++G G +G VY+G + + + A+K + + +F+ E I+ H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 407 ELIGYAA-TEDELFLIYEYAQKGSLKSHL----HDPQNRGQTSLSWIMRVQIALDAARGL 461
L+G +E ++ Y + G L++ + H+P + + L A+G+
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGM 143
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGY 520
+Y+ +VHRD+ + N +LD F K++DFGLA+ + K T +
Sbjct: 144 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 200
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+A E L T KSDV++FGV+L+E+++
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHS 403
E F +G GTYG VY + + VA+K++ E + E+ +L +++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
N+V+L+ TE++L+L++E+ + LK+ + T + + +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQ-DLKTFM---DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H H +HRD+K N+L+++ K++DFGLA+ G T T V T Y AP
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYTHEVVTLWYRAP 171
Query: 524 EYLTD-GLATAKSDVYAFGVVLFEIISGK 551
E L + D+++ G + E+++ +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 26/209 (12%)
Query: 356 SSLLGHGTYGSVYYGNIRNQE-----VAIKRMTAT----KTKEFMAEMKILCKVHHSNLV 406
+ ++G G +G VY+G + + + A+K + + +F+ E I+ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 407 ELIGYAA-TEDELFLIYEYAQKGSLKSHL----HDPQNRGQTSLSWIMRVQIALDAARGL 461
L+G +E ++ Y + G L++ + H+P + + L A+G+
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGM 145
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGY 520
+Y+ +VHRD+ + N +LD F K++DFGLA+ + K T +
Sbjct: 146 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 202
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+A E L T KSDV++FGV+L+E+++
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 36/225 (16%)
Query: 353 FSDSSLLGHGTYGSVYYGN--IRNQEVAIKRMTATKTK--EFMAEMKILCKVHHS----- 403
F + ++LG G +G V + ++ AIK++ T+ K ++E+ +L ++H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 404 --------NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIAL 455
N V+ + + LF+ EY + +L +H Q W + QI L
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQI-L 126
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD--------- 506
+A L YIH +HRD+K NI +D + KI DFGLAK V ++ D
Sbjct: 127 EA---LSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 507 --GEATVTKVVGTFGYLAPEYLT-DGLATAKSDVYAFGVVLFEII 548
+T +GT Y+A E L G K D+Y+ G++ FE+I
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 18/209 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHS 403
E F +G GTYG VY + + VA+K++ E + E+ +L +++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
N+V+L+ TE++L+L++E+ + LK + T + + +GL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGLSF 118
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H H +HRD+K N+L+++ K++DFGLA+ G T T V T Y AP
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYTHEVVTLWYRAP 172
Query: 524 EYLTD-GLATAKSDVYAFGVVLFEIISGK 551
E L + D+++ G + E+++ +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 18/209 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHS 403
E F +G GTYG VY + + VA+K++ E + E+ +L +++H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
N+V+L+ TE++L+L++E+ + LK + T + + +GL +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H H +HRD+K N+L+++ K++DFGLA+ G T T V T Y AP
Sbjct: 126 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYTHEVVTLWYRAP 179
Query: 524 EYLTD-GLATAKSDVYAFGVVLFEIISGK 551
E L + D+++ G + E+++ +
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 26/209 (12%)
Query: 356 SSLLGHGTYGSVYYGNIRNQE-----VAIKRMTAT----KTKEFMAEMKILCKVHHSNLV 406
+ ++G G +G VY+G + + + A+K + + +F+ E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 407 ELIGYAA-TEDELFLIYEYAQKGSLKSHL----HDPQNRGQTSLSWIMRVQIALDAARGL 461
L+G +E ++ Y + G L++ + H+P + + L A+G+
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD--------LIGFGLQVAKGM 146
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGY 520
+Y+ +VHRD+ + N +LD F K++DFGLA+ + K T +
Sbjct: 147 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 203
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+A E L T KSDV++FGV+L+E+++
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 26/209 (12%)
Query: 356 SSLLGHGTYGSVYYGNIRNQE-----VAIKRMTAT----KTKEFMAEMKILCKVHHSNLV 406
+ ++G G +G VY+G + + + A+K + + +F+ E I+ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 407 ELIGYA-ATEDELFLIYEYAQKGSLKSHL----HDPQNRGQTSLSWIMRVQIALDAARGL 461
L+G +E ++ Y + G L++ + H+P + + L A+G+
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGM 144
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGY 520
+Y+ +VHRD+ + N +LD F K++DFGLA+ + K T +
Sbjct: 145 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 201
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+A E L T KSDV++FGV+L+E+++
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 25/243 (10%)
Query: 359 LGHGTYGSVYYGNIRN--QEVAIKRMTATKTKE---FMAEMKILCKVHHSNLVELIGYAA 413
+G G+ G V +R+ + VA+K+M K + E+ I+ H N+VE+
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 414 TEDELFLIYEYAQKGSLKSHL-HDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHY 472
DEL+++ E+ + G+L + H N Q + + L + L +H
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQG---V 191
Query: 473 VHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLAT 532
+HRDIKS +ILL R K+SDFG V K +VGT ++APE ++
Sbjct: 192 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX---LVGTPYWMAPELISRLPYG 248
Query: 533 AKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSLKD 592
+ D+++ G+++ E++ G+ + + R +L + + SP SLK
Sbjct: 249 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSP------SLKG 302
Query: 593 YID 595
++D
Sbjct: 303 FLD 305
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 119/264 (45%), Gaps = 33/264 (12%)
Query: 330 TDVFDMEKPVVFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE 389
+ + KP E+ E F ++G G +G V ++N E I M E
Sbjct: 53 AEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTE-RIYAMKILNKWE 111
Query: 390 FMAEMKILCKVHHSNL--------VELIGYA-ATEDELFLIYEYAQKGSLKSHLHDPQNR 440
+ + C ++ + + YA E+ L+L+ +Y G L + L +++
Sbjct: 112 MLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK 171
Query: 441 GQTSLS--WIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLA 498
++ +I + +A+D+ IH+ HYVHRDIK N+LLD +++DFG
Sbjct: 172 LPEDMARFYIGEMVLAIDS------IHQ---LHYVHRDIKPDNVLLDVNGHIRLADFG-- 220
Query: 499 KLVGKTSDGEATVTKVVGTFGYLAPEYLT---DGLAT--AKSDVYAFGVVLFEIISGK-- 551
+ DG + VGT Y++PE L DG+ + D ++ GV ++E++ G+
Sbjct: 221 SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
Query: 552 ---EAIIRTEGMVSKNQERRSLAS 572
E+++ T G + ++ER S
Sbjct: 281 FYAESLVETYGKIMNHEERFQFPS 304
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 23/212 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
+ E F LG G +G+VY R + +A+K + T+ + + E++I
Sbjct: 9 WTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH 68
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAA 458
+ H N++ L GY ++LI EYA G++ L + Q + ++I + A
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT------ELA 122
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
L Y H +HRDIK N+LL S KI+DFG + V S T + GT
Sbjct: 123 NALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDT---LCGTL 174
Query: 519 GYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
YL PE + + K D+++ GV+ +E + G
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 18/209 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHS 403
E F +G GTYG VY + + VA+K++ E + E+ +L +++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
N+V+L+ TE++L+L++E+ + LK + T + + +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H H +HRD+K N+L+++ K++DFGLA+ G T T V T Y AP
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYTHEVVTLWYRAP 171
Query: 524 EYLTD-GLATAKSDVYAFGVVLFEIISGK 551
E L + D+++ G + E+++ +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 18/209 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHS 403
E F +G GTYG VY + + VA+K++ E + E+ +L +++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
N+V+L+ TE++L+L++E+ + LK + T + + +GL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H H +HRD+K N+L+++ K++DFGLA+ G T T V T Y AP
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYTHEVVTLWYRAP 172
Query: 524 EYLTD-GLATAKSDVYAFGVVLFEIISGK 551
E L + D+++ G + E+++ +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 18/211 (8%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVH 401
+ E F +G GTYG VY + + VA+K++ E + E+ +L +++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H N+V+L+ TE++L+L++E+ + LK + T + + +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGL 117
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+ H H +HRD+K N+L+++ K++DFGLA+ G T T V T Y
Sbjct: 118 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYTHEVVTLWYR 171
Query: 522 APEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
APE L + D+++ G + E+++ +
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 18/209 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHS 403
E F +G GTYG VY + + VA+K++ E + E+ +L +++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
N+V+L+ TE++L+L++E+ + LK + T + + +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H H +HRD+K N+L+++ K++DFGLA+ G T T V T Y AP
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYTHEVVTLWYRAP 171
Query: 524 EYLTD-GLATAKSDVYAFGVVLFEIISGK 551
E L + D+++ G + E+++ +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 25/243 (10%)
Query: 359 LGHGTYGSVYYGNIRN--QEVAIKRMTATKTKE---FMAEMKILCKVHHSNLVELIGYAA 413
+G G+ G V +R+ + VA+K+M K + E+ I+ H N+VE+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 414 TEDELFLIYEYAQKGSLKSHL-HDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHY 472
DEL+++ E+ + G+L + H N Q + + L + L +H
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQG---V 268
Query: 473 VHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLAT 532
+HRDIKS +ILL R K+SDFG V K +VGT ++APE ++
Sbjct: 269 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX---LVGTPYWMAPELISRLPYG 325
Query: 533 AKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSLKD 592
+ D+++ G+++ E++ G+ + + R +L + + SP SLK
Sbjct: 326 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSP------SLKG 379
Query: 593 YID 595
++D
Sbjct: 380 FLD 382
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 358 LLGHGTYGSVYYGNIRNQEV-----AIKRMTATKTKE---FMAEMKILCK-VHHSNLVEL 408
++G G++G V + +EV +++ K KE M+E +L K V H LV L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
T D+L+ + +Y G L HL R + L R A + A L Y+H
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQ----RERCFLEPRARFYAA-EIASALGYLHS-- 157
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
+ V+RD+K NILLDS ++DFGL K + + +T + GT YLAPE L
Sbjct: 158 -LNIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPEVLHK 213
Query: 529 GLATAKSDVYAFGVVLFEIISG 550
D + G VL+E++ G
Sbjct: 214 QPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 119/264 (45%), Gaps = 33/264 (12%)
Query: 330 TDVFDMEKPVVFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE 389
+ + KP E+ E F ++G G +G V ++N E I M E
Sbjct: 69 AEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTE-RIYAMKILNKWE 127
Query: 390 FMAEMKILCKVHHSNL--------VELIGYA-ATEDELFLIYEYAQKGSLKSHLHDPQNR 440
+ + C ++ + + YA E+ L+L+ +Y G L + L +++
Sbjct: 128 MLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK 187
Query: 441 GQTSLS--WIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLA 498
++ +I + +A+D+ IH+ HYVHRDIK N+LLD +++DFG
Sbjct: 188 LPEDMARFYIGEMVLAIDS------IHQ---LHYVHRDIKPDNVLLDVNGHIRLADFG-- 236
Query: 499 KLVGKTSDGEATVTKVVGTFGYLAPEYLT---DGLAT--AKSDVYAFGVVLFEIISGK-- 551
+ DG + VGT Y++PE L DG+ + D ++ GV ++E++ G+
Sbjct: 237 SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
Query: 552 ---EAIIRTEGMVSKNQERRSLAS 572
E+++ T G + ++ER S
Sbjct: 297 FYAESLVETYGKIMNHEERFQFPS 320
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 18/209 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHS 403
E F +G GTYG VY + + VA+K++ E + E+ +L +++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
N+V+L+ TE++L+L++E+ + LK + T + + +GL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H H +HRD+K N+L+++ K++DFGLA+ G T T V T Y AP
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYTHEVVTLWYRAP 172
Query: 524 EYLTD-GLATAKSDVYAFGVVLFEIISGK 551
E L + D+++ G + E+++ +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 26/209 (12%)
Query: 356 SSLLGHGTYGSVYYGNIRNQE-----VAIKRMTAT----KTKEFMAEMKILCKVHHSNLV 406
+ ++G G +G VY+G + + + A+K + + +F+ E I+ H N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 407 ELIGYAA-TEDELFLIYEYAQKGSLKSHL----HDPQNRGQTSLSWIMRVQIALDAARGL 461
L+G +E ++ Y + G L++ + H+P + + L A+G+
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGM 141
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGY 520
+Y+ +VHRD+ + N +LD F K++DFGLA+ + K T +
Sbjct: 142 KYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 198
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+A E L T KSDV++FGV+L+E+++
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 38/234 (16%)
Query: 332 VFDMEKPVVFTYDEILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATK--- 386
VFD + V F + EIL A +G G++G V N + A+K M K
Sbjct: 5 VFDENEDVNFDHFEILRA---------IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE 55
Query: 387 ---TKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQN---R 440
+ E++I+ + H LV L E+++F++ + G L+ HL QN +
Sbjct: 56 RNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ--QNVHFK 113
Query: 441 GQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKL 500
+T +I + +ALD + +HRD+K NILLD I+DF +A +
Sbjct: 114 EETVKLFICELVMALDYLQN---------QRIIHRDMKPDNILLDEHGHVHITDFNIAAM 164
Query: 501 VGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS---DVYAFGVVLFEIISGK 551
+ + E +T + GT Y+APE + S D ++ GV +E++ G+
Sbjct: 165 LPR----ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 18/209 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHS 403
E F +G GTYG VY + + VA+K++ E + E+ +L +++H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
N+V+L+ TE++L+L++E+ + LK + T + + +GL +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H H +HRD+K N+L+++ K++DFGLA+ G T T V T Y AP
Sbjct: 126 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYTHEVVTLWYRAP 179
Query: 524 EYLT-DGLATAKSDVYAFGVVLFEIISGK 551
E L + D+++ G + E+++ +
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 18/209 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHS 403
E F +G GTYG VY + + VA+K++ E + E+ +L +++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
N+V+L+ TE++L+L++E+ + LK + T + + +GL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H H +HRD+K N+L+++ K++DFGLA+ G T T V T Y AP
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYTHEVVTLWYRAP 172
Query: 524 EYLT-DGLATAKSDVYAFGVVLFEIISGK 551
E L + D+++ G + E+++ +
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 351 EGFSDSSLLGHGTYGSVYYGNIRN--QEVAIKRMTATK-----TKEFMAEMKILCKVHHS 403
E + +G G+YG V+ R+ Q VAIK+ ++ K + E+++L ++ H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
NLV L+ + L L++EY L +R Q + + I + + +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHE-----LDRYQRGVPEHLVKSITWQTLQAVNF 117
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H+H +HRD+K NIL+ K+ DFG A+L+ SD V T Y +P
Sbjct: 118 CHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD---YYDDEVATRWYRSP 171
Query: 524 EYLT-DGLATAKSDVYAFGVVLFEIISG 550
E L D DV+A G V E++SG
Sbjct: 172 ELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 19/199 (9%)
Query: 359 LGHGTYGSVYYGNIRNQE-----VAIK---RMTATKTKE-FMAEMKILCKVHHSNLVELI 409
+G G +G V+ G + E VAIK T+ +E F+ E + + H ++V+LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 410 GYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTK 469
G TE+ +++I E G L+S L Q R + SL + A + L Y+
Sbjct: 78 G-VITENPVWIIMELCTLGELRSFL---QVR-KFSLDLASLILYAYQLSTALAYLESK-- 130
Query: 470 THYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDG 529
+VHRDI + N+L+ S K+ DFGL++ + ++ +A+ K+ ++APE +
Sbjct: 131 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL--PIKWMAPESINFR 187
Query: 530 LATAKSDVYAFGVVLFEII 548
T+ SDV+ FGV ++EI+
Sbjct: 188 RFTSASDVWMFGVCMWEIL 206
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 103/201 (51%), Gaps = 21/201 (10%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKTK------EFMAEMKILCKVHHSNLVELIG 410
LG GT+G V G + +VA+K + K + + E++ L H ++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 411 YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
+T + F++ EY G L ++ G+ R+ + +A ++Y H H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYI---CKHGRVEEMEARRLFQQILSA--VDYCHRHM-- 131
Query: 471 HYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGL 530
VHRD+K N+LLD+ AKI+DFGL+ ++ SDGE + G+ Y APE ++ L
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGE-FLRDSCGSPNYAAPEVISGRL 186
Query: 531 -ATAKSDVYAFGVVLFEIISG 550
A + D+++ GV+L+ ++ G
Sbjct: 187 YAGPEVDIWSCGVILYALLCG 207
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 139/320 (43%), Gaps = 62/320 (19%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIRNQE-----VAIKRMTA-----TKTKEFMAE 393
+++L + F+ +LG G +GSV ++ ++ VA+K + A + +EF+ E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 394 MKILCKVHHSNLVELIGYAATEDEL------FLIYEYAQKGSLKSHL------HDPQNRG 441
+ + H ++ +L+G + +I + + G L + L +P N
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135
Query: 442 QTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLA-KL 500
+L V+ +D A G+EY+ + +++HRD+ + N +L ++DFGL+ K+
Sbjct: 136 LQTL-----VRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKI 187
Query: 501 VGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGM 560
+ +K+ +LA E L D L T SDV+AFGV ++EI+ T G
Sbjct: 188 YSGDYYRQGCASKL--PVKWLALESLADNLYTVHSDVWAFGVTMWEIM--------TRGQ 237
Query: 561 VS-KNQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVD 619
E + ++++ R LK P +C+ ++ L QC
Sbjct: 238 TPYAGIENAEIYNYLIGGNR----------LKQ----------PPECMEEVYDLMYQCWS 277
Query: 620 EDPILRPDMKQVVISLSQIL 639
DP RP + + L IL
Sbjct: 278 ADPKQRPSFTCLRMELENIL 297
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 18/211 (8%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVH 401
+ E F +G GTYG VY + + VA+K++ E + E+ +L +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H N+V+L+ TE++L+L++E+ + LK+ + T + + +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFM---DASALTGIPLPLIKSYLFQLLQGL 119
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+ H H +HRD+K N+L+++ K++DFGLA+ G T V T Y
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLWYR 173
Query: 522 APEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
APE L + D+++ G + E+++ +
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 38/214 (17%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKR----MTATKTKEFMAEMKILCKVHHSNLVEL---- 408
LG G +G V + ++VAIK+ ++ + + E++I+ K++H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 409 --IGYAATEDELFLIYEYAQKGSLKSHLHDPQN-----RG--QTSLSWIMRVQIALDAAR 459
+ A D L EY + G L+ +L+ +N G +T LS D +
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS---------DISS 133
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRA---KISDFGLAKLVGKTSDGEATVTKVVG 516
L Y+HE+ +HRD+K NI+L + KI D G AK + D T+ VG
Sbjct: 134 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL----DQGELCTEFVG 186
Query: 517 TFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
T YLAPE L T D ++FG + FE I+G
Sbjct: 187 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 38/214 (17%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKR----MTATKTKEFMAEMKILCKVHHSNLVEL---- 408
LG G +G V + ++VAIK+ ++ + + E++I+ K++H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 409 --IGYAATEDELFLIYEYAQKGSLKSHLHDPQN-----RG--QTSLSWIMRVQIALDAAR 459
+ A D L EY + G L+ +L+ +N G +T LS D +
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS---------DISS 132
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRA---KISDFGLAKLVGKTSDGEATVTKVVG 516
L Y+HE+ +HRD+K NI+L + KI D G AK + D T+ VG
Sbjct: 133 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL----DQGELCTEFVG 185
Query: 517 TFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
T YLAPE L T D ++FG + FE I+G
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 40/226 (17%)
Query: 353 FSDSSLLGHGTYGSVYYGNIR-NQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIG- 410
F + L+G G +G V+ R + + + R ++ E+K L K+ H N+V G
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGC 73
Query: 411 ------YAATEDE----------------------LFLIYEYAQKGSLKSHLHDPQNRGQ 442
T D+ LF+ E+ KG+L+ + + RG+
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE--KRRGE 131
Query: 443 TSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG 502
L ++ +++ +G++YIH +HRD+K SNI L + KI DFGL +
Sbjct: 132 -KLDKVLALELFEQITKGVDYIHSKK---LIHRDLKPSNIFLVDTKQVKIGDFGL--VTS 185
Query: 503 KTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEII 548
+DG+ T +K GT Y++PE ++ + D+YA G++L E++
Sbjct: 186 LKNDGKRTRSK--GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 347 LFATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCK 399
L + E F +G GTYG VY + + VA+K++ E + E+ +L +
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR 459
++H N+V+L+ TE++L+L++E+ + LK + T + + +
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQ 118
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
GL + H H +HRD+K N+L+++ K++DFGLA+ G T V T
Sbjct: 119 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLW 172
Query: 520 YLAPEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
Y APE L + D+++ G + E+++ +
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 139/307 (45%), Gaps = 55/307 (17%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 127 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLAS 572
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 180 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----------------------- 214
Query: 573 FMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQV 631
+ P D + S + ++ P C + M+ ++C D RP +++
Sbjct: 215 -----FGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 269
Query: 632 VISLSQI 638
+I S++
Sbjct: 270 IIEFSKM 276
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 347 LFATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCK 399
L + E F +G GTYG VY + + VA+K++ E + E+ +L +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR 459
++H N+V+L+ TE++L+L++E+ + LK + T + + +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQ 117
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
GL + H H +HRD+K N+L+++ K++DFGLA+ G T V T
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLW 171
Query: 520 YLAPEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
Y APE L + D+++ G + E+++ +
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVH 401
+ E F +G GTYG VY + + VA+K++ E + E+ +L +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H N+V+L+ TE++L+L++E+ + LK + T + + +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGL 116
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+ H H +HRD+K N+L+++ K++DFGLA+ G T V T Y
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLWYR 170
Query: 522 APEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
APE L + D+++ G + E+++ +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVH 401
+ E F +G GTYG VY + + VA+K++ E + E+ +L +++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H N+V+L+ TE++L+L++E+ + LK + T + + +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGL 118
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+ H H +HRD+K N+L+++ K++DFGLA+ G T V T Y
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLWYR 172
Query: 522 APEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
APE L + D+++ G + E+++ +
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVH 401
+ E F +G GTYG VY + + VA+K++ E + E+ +L +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H N+V+L+ TE++L+L++E+ + LK + T + + +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGL 116
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+ H H +HRD+K N+L+++ K++DFGLA+ G T V T Y
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLWYR 170
Query: 522 APEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
APE L + D+++ G + E+++ +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVH 401
+ E F +G GTYG VY + + VA+K++ E + E+ +L +++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H N+V+L+ TE++L+L++E+ + LK + T + + +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGL 118
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+ H H +HRD+K N+L+++ K++DFGLA+ G T V T Y
Sbjct: 119 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLWYR 172
Query: 522 APEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
APE L + D+++ G + E+++ +
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVH 401
+ E F +G GTYG VY + + VA+K++ E + E+ +L +++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H N+V+L+ TE++L+L++E+ + LK + T + + +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGL 118
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+ H H +HRD+K N+L+++ K++DFGLA+ G T V T Y
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLWYR 172
Query: 522 APEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
APE L + D+++ G + E+++ +
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVH 401
+ E F +G GTYG VY + + VA+K++ E + E+ +L +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H N+V+L+ TE++L+L++E+ + LK + T + + +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGL 119
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+ H H +HRD+K N+L+++ K++DFGLA+ G T V T Y
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLWYR 173
Query: 522 APEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
APE L + D+++ G + E+++ +
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
F + F LG G +G+VY + VA+K + ++ + + E++I
Sbjct: 20 FTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAH 79
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR 459
+HH N++ L Y ++LI EYA +G L L + + IM + A
Sbjct: 80 LHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIME-----ELAD 134
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
L Y H +HRDIK N+LL KI+DFG + V S T + GT
Sbjct: 135 ALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKT---MCGTLD 186
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
YL PE + + K D++ GV+ +E++ G
Sbjct: 187 YLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHS 403
E F +G GTYG VY + + VA+K++ E + E+ +L +++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
N+V+L+ TE++L+L++E+ + LK + T + + +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H H +HRD+K N+L+++ K++DFGLA+ G T V T Y AP
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLWYRAP 171
Query: 524 EYLTD-GLATAKSDVYAFGVVLFEIISGK 551
E L + D+++ G + E+++ +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 38/252 (15%)
Query: 390 FMAEMKILCKVHHSNLVELIGYAATEDE--LFLIYEYAQKGSLKSHLHDPQNRGQTSLSW 447
+ E++IL ++H ++V+ G + E + L+ EY GSL+ +L R L+
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQ 113
Query: 448 IMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK---- 503
++ A G+ Y+H HY+HR + + N+LLD+ KI DFGLAK V +
Sbjct: 114 LLL--FAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 168
Query: 504 ---TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGM 560
DG++ V F Y APE L + SDV++FGV L+E+++
Sbjct: 169 YRVREDGDSPV------FWY-APECLKECKFYYASDVWSFGVTLYELLT----------Y 211
Query: 561 VSKNQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDE 620
NQ + + ++ ++ M++ L + ++ P C ++ L K C +
Sbjct: 212 CDSNQSPHTKFTELIG---HTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWET 268
Query: 621 DPILRPDMKQVV 632
+ RP + +V
Sbjct: 269 EASFRPTFQNLV 280
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 38/252 (15%)
Query: 390 FMAEMKILCKVHHSNLVELIGYAATEDE--LFLIYEYAQKGSLKSHLHDPQNRGQTSLSW 447
+ E++IL ++H ++V+ G + E + L+ EY GSL+ +L R L+
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQ 112
Query: 448 IMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGK---- 503
++ A G+ Y+H HY+HR + + N+LLD+ KI DFGLAK V +
Sbjct: 113 LLL--FAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 167
Query: 504 ---TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGM 560
DG++ V F Y APE L + SDV++FGV L+E+++
Sbjct: 168 YRVREDGDSPV------FWY-APECLKECKFYYASDVWSFGVTLYELLT----------Y 210
Query: 561 VSKNQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDE 620
NQ + + ++ ++ M++ L + ++ P C ++ L K C +
Sbjct: 211 CDSNQSPHTKFTELIG---HTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWET 267
Query: 621 DPILRPDMKQVV 632
+ RP + +V
Sbjct: 268 EASFRPTFQNLV 279
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVH 401
+ E F +G GTYG VY + + VA+K++ E + E+ +L +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H N+V+L+ TE++L+L++E+ + LK + T + + +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGL 116
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+ H H +HRD+K N+L+++ K++DFGLA+ G T V T Y
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLWYR 170
Query: 522 APEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
APE L + D+++ G + E+++ +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 139/307 (45%), Gaps = 55/307 (17%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 130 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLAS 572
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 183 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----------------------- 217
Query: 573 FMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQV 631
+ P D + S + ++ P C + M+ ++C D RP +++
Sbjct: 218 -----FGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 272
Query: 632 VISLSQI 638
+I S++
Sbjct: 273 IIEFSKM 279
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVH 401
+ E F +G GTYG VY + + VA+K++ E + E+ +L +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H N+V+L+ TE++L+L++E+ + LK + T + + +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFM---DASALTGIPLPLIKSYLFQLLQGL 116
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+ H H +HRD+K N+L+++ K++DFGLA+ G T V T Y
Sbjct: 117 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLWYR 170
Query: 522 APEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
APE L + D+++ G + E+++ +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVH 401
+ E F +G GTYG VY + + VA+K++ E + E+ +L +++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H N+V+L+ TE++L+L++E+ + LK + T + + +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGL 117
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+ H H +HRD+K N+L+++ K++DFGLA+ G T V T Y
Sbjct: 118 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLWYR 171
Query: 522 APEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
APE L + D+++ G + E+++ +
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHS 403
E F +G GTYG VY + + VA+K++ E + E+ +L +++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
N+V+L+ TE++L+L++E+ + LK + T + + +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H H +HRD+K N+L+++ K++DFGLA+ G T V T Y AP
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLWYRAP 171
Query: 524 EYLTD-GLATAKSDVYAFGVVLFEIISGK 551
E L + D+++ G + E+++ +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVH 401
+ E F +G GTYG VY + + VA+K++ E + E+ +L +++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H N+V+L+ TE++L+L++E+ + LK + T + + +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGL 117
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+ H H +HRD+K N+L+++ K++DFGLA+ G T V T Y
Sbjct: 118 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLWYR 171
Query: 522 APEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
APE L + D+++ G + E+++ +
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 74 VMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 130
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 131 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 183
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 184 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 29/216 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQE----VAIKRMTATKTKEF-----MAEMKILCK 399
+ E + + L+G G+YG V RN++ VAIK+ + + M E+K+L +
Sbjct: 23 SMEKYENLGLVGEGSYGMVM--KCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR 459
+ H NLV L+ + +L++E+ L D L + + +
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTIL-----DDLELFPNGLDYQVVQKYLFQIIN 135
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLV---GKTSDGEATVTKVVG 516
G+ + H H +HRDIK NIL+ + K+ DFG A+ + G+ D E V
Sbjct: 136 GIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE------VA 186
Query: 517 TFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T Y APE L + K+ DV+A G ++ E+ G+
Sbjct: 187 TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 19/199 (9%)
Query: 359 LGHGTYGSVYYGNIRNQE-----VAIK---RMTATKTKE-FMAEMKILCKVHHSNLVELI 409
+G G +G V+ G + E VAIK T+ +E F+ E + + H ++V+LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 410 GYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTK 469
G TE+ +++I E G L+S L Q R + SL + A + L Y+
Sbjct: 78 G-VITENPVWIIMELCTLGELRSFL---QVR-KYSLDLASLILYAYQLSTALAYLESK-- 130
Query: 470 THYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDG 529
+VHRDI + N+L+ S K+ DFGL++ + ++ +A+ K+ ++APE +
Sbjct: 131 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 187
Query: 530 LATAKSDVYAFGVVLFEII 548
T+ SDV+ FGV ++EI+
Sbjct: 188 RFTSASDVWMFGVCMWEIL 206
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVH 401
+ E F +G GTYG VY + + VA+K++ E + E+ +L +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H N+V+L+ TE++L+L++E+ + LK + T + + +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGL 116
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+ H H +HRD+K N+L+++ K++DFGLA+ G T V T Y
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLWYR 170
Query: 522 APEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
APE L + D+++ G + E+++ +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 34/221 (15%)
Query: 359 LGHGTYGSVYYGNIRN-------QEVAIKRM----TATKTKEFMAEMKILCKVHHSNLVE 407
+G G +G V+ VA+K + +A +F E ++ + + N+V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLH-------------DPQNRGQTS------LSWI 448
L+G A + L++EY G L L D R + S LS
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 449 MRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGE 508
++ IA A G+ Y+ E +VHRD+ + N L+ KI+DFGL++ + +
Sbjct: 175 EQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
A + ++ PE + T +SDV+A+GVVL+EI S
Sbjct: 232 ADGNDAI-PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHS 403
E F +G GTYG VY + + VA+K++ E + E+ +L +++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
N+V+L+ TE++L+L++E+ + LK + T + + +GL +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H H +HRD+K N+L+++ K++DFGLA+ G T V T Y AP
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLWYRAP 173
Query: 524 EYLTD-GLATAKSDVYAFGVVLFEIISGK 551
E L + D+++ G + E+++ +
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWI 448
E +AE ++ ++ + +V +IG E + L+ E A+ G L +L QNR + I
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ--QNRHVKDKNII 114
Query: 449 MRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGE 508
++ + G++Y+ E +++VHRD+ + N+LL + AKISDFGL+K + +
Sbjct: 115 ---ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXY 168
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
T + APE + ++KSDV++FGV+++E S
Sbjct: 169 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHS 403
E F +G GTYG VY + + VA+ ++ E + E+ +L +++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
N+V+L+ TE++L+L++E+ + LK + T + + +GL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H H +HRD+K N+L+++ K++DFGLA+ G T T V T Y AP
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYTHEVVTLWYRAP 172
Query: 524 EYLTD-GLATAKSDVYAFGVVLFEIISGK 551
E L + D+++ G + E+++ +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 351 EGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHS 403
E F +G GTYG VY + + VA+ ++ E + E+ +L +++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
N+V+L+ TE++L+L++E+ + LK + T + + +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H H +HRD+K N+L+++ K++DFGLA+ G T T V T Y AP
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYTHEVVTLWYRAP 171
Query: 524 EYLTD-GLATAKSDVYAFGVVLFEIISGK 551
E L + D+++ G + E+++ +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 29/247 (11%)
Query: 353 FSDSSLLGHGTYGSVYY---------GNIRNQEVAIKRMTATKTK-EFMAEMKILCKVHH 402
F +LG G++G V+ G++ +V K + + E IL V+H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 403 SNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLE 462
+V+L TE +L+LI ++ + G L + L + + + + ++AL GL+
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-AELAL----GLD 144
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
++H ++RD+K NILLD K++DFGL+K + D E GT Y+A
Sbjct: 145 HLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMA 198
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSP 582
PE + + +D +++GV++FE+++G + + ++R+ + +L A P
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTG--------SLPFQGKDRKETMTLILKAKLGMP 250
Query: 583 DSMSMSS 589
+S +
Sbjct: 251 QFLSTEA 257
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 19/199 (9%)
Query: 359 LGHGTYGSVYYGNIRNQE-----VAIK---RMTATKTKE-FMAEMKILCKVHHSNLVELI 409
+G G +G V+ G + E VAIK T+ +E F+ E + + H ++V+LI
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 410 GYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTK 469
G TE+ +++I E G L+S L Q R + SL + A + L Y+
Sbjct: 106 G-VITENPVWIIMELCTLGELRSFL---QVR-KYSLDLASLILYAYQLSTALAYLESK-- 158
Query: 470 THYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDG 529
+VHRDI + N+L+ S K+ DFGL++ + ++ +A+ K+ ++APE +
Sbjct: 159 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 215
Query: 530 LATAKSDVYAFGVVLFEII 548
T+ SDV+ FGV ++EI+
Sbjct: 216 RFTSASDVWMFGVCMWEIL 234
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 71 VMASVDNPHVCRLLGICLT-STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI-- 127
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 128 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 181 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 127 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 180 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 19/199 (9%)
Query: 359 LGHGTYGSVYYGNIRNQE-----VAIK---RMTATKTKE-FMAEMKILCKVHHSNLVELI 409
+G G +G V+ G + E VAIK T+ +E F+ E + + H ++V+LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 410 GYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTK 469
G TE+ +++I E G L+S L Q R + SL + A + L Y+
Sbjct: 78 G-VITENPVWIIMELCTLGELRSFL---QVR-KYSLDLASLILYAYQLSTALAYLESK-- 130
Query: 470 THYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDG 529
+VHRDI + N+L+ S K+ DFGL++ + ++ +A+ K+ ++APE +
Sbjct: 131 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 187
Query: 530 LATAKSDVYAFGVVLFEII 548
T+ SDV+ FGV ++EI+
Sbjct: 188 RFTSASDVWMFGVCMWEIL 206
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 19/199 (9%)
Query: 359 LGHGTYGSVYYGNIRNQE-----VAIK---RMTATKTKE-FMAEMKILCKVHHSNLVELI 409
+G G +G V+ G + E VAIK T+ +E F+ E + + H ++V+LI
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 410 GYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTK 469
G TE+ +++I E G L+S L Q R + SL + A + L Y+
Sbjct: 83 G-VITENPVWIIMELCTLGELRSFL---QVR-KYSLDLASLILYAYQLSTALAYLESK-- 135
Query: 470 THYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDG 529
+VHRDI + N+L+ S K+ DFGL++ + ++ +A+ K+ ++APE +
Sbjct: 136 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 192
Query: 530 LATAKSDVYAFGVVLFEII 548
T+ SDV+ FGV ++EI+
Sbjct: 193 RFTSASDVWMFGVCMWEIL 211
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 139/307 (45%), Gaps = 55/307 (17%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 21 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 80 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 136
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 137 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLAS 572
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 190 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----------------------- 224
Query: 573 FMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQV 631
+ P D + S + ++ P C + M+ ++C D RP +++
Sbjct: 225 -----FGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 279
Query: 632 VISLSQI 638
+I S++
Sbjct: 280 IIEFSKM 286
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 42/211 (19%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIK-----RMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G + V + +EVAIK ++ T ++ E++I+ ++H N+V+L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 412 AATEDELFLIYEYAQKGS----LKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
TE L+LI EYA G L +H + ++ I+ ++Y H+
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV---------SAVQYCHQ- 129
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF----GYLAP 523
VHRD+K+ N+LLD+ KI+DFG + E TV + TF Y AP
Sbjct: 130 --KRIVHRDLKAENLLLDADMNIKIADFGFS--------NEFTVGGKLDTFCGSPPYAAP 179
Query: 524 EYLT----DGLATAKSDVYAFGVVLFEIISG 550
E DG + DV++ GV+L+ ++SG
Sbjct: 180 ELFQGKKYDG---PEVDVWSLGVILYTLVSG 207
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 130 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 183 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 17/198 (8%)
Query: 359 LGHGTYGSVYYGNIRN--QEVAIKRMTATKTKE---FMAEMKILCKVHHSNLVELIGYAA 413
+G G+ G V ++ ++VA+K M K + E+ I+ H N+VE+
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 414 TEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
+EL+++ E+ Q G+L + Q L+ + + L Y+H +
Sbjct: 113 VGEELWVLMEFLQGGALTDIV------SQVRLNEEQIATVCEAVLQALAYLHAQG---VI 163
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATA 533
HRDIKS +ILL R K+SDFG + K +VGT ++APE ++ L
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKX---LVGTPYWMAPEVISRSLYAT 220
Query: 534 KSDVYAFGVVLFEIISGK 551
+ D+++ G+++ E++ G+
Sbjct: 221 EVDIWSLGIMVIEMVDGE 238
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 129 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 182 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 71 VMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 127
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 128 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 181 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVH 401
+ E F +G GTYG VY + + VA+K++ E + E+ +L +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H N+V+L+ TE++L+L++E+ + LK + T + + +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGL 119
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+ H H +HRD+K N+L+++ K++DFGLA+ G T V T Y
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLWYR 173
Query: 522 APEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
APE L + D+++ G + E+++ +
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 136/328 (41%), Gaps = 70/328 (21%)
Query: 338 PVVFTYDEIL-FATEGFSDSSLLGHGTYGSVY----YGNIRNQE---VAIKRMTA----T 385
P YD F S LG G +G V YG I++ VA+K + T
Sbjct: 32 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 91
Query: 386 KTKEFMAEMKILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR---G 441
+ + M+E+K+L + +H N+V L+G +I EY G L + L ++
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 151
Query: 442 QTSLSWIMRV-----------QIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRA 490
+TS + IM + A+G+ ++ + +HRD+ + NILL
Sbjct: 152 KTSPA-IMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRIT 207
Query: 491 KISDFGLAKLVGKTSD----GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFE 546
KI DFGLA+ + S+ G A + ++APE + + + T +SDV+++G+ L+E
Sbjct: 208 KICDFGLARHIKNDSNYVVKGNARL-----PVKWMAPESIFNCVYTFESDVWSYGIFLWE 262
Query: 547 IISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSP-DSMSM-SSLKDYIDPNMMDLYPH 604
+ S L +SP M + S I L P
Sbjct: 263 LFS----------------------------LGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 605 DCLFKMAMLAKQCVDEDPILRPDMKQVV 632
+M + K C D DP+ RP KQ+V
Sbjct: 295 HAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 19/199 (9%)
Query: 359 LGHGTYGSVYYGNIRNQE-----VAIK---RMTATKTKE-FMAEMKILCKVHHSNLVELI 409
+G G +G V+ G + E VAIK T+ +E F+ E + + H ++V+LI
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 410 GYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTK 469
G TE+ +++I E G L+S L Q R + SL + A + L Y+
Sbjct: 75 G-VITENPVWIIMELCTLGELRSFL---QVR-KYSLDLASLILYAYQLSTALAYLE---S 126
Query: 470 THYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDG 529
+VHRDI + N+L+ S K+ DFGL++ + ++ +A+ K+ ++APE +
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 184
Query: 530 LATAKSDVYAFGVVLFEII 548
T+ SDV+ FGV ++EI+
Sbjct: 185 RFTSASDVWMFGVCMWEIL 203
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWI 448
E +AE ++ ++ + +V +IG E + L+ E A+ G L +L QNR + I
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ--QNRHVKDKNII 130
Query: 449 MRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGE 508
++ + G++Y+ E +++VHRD+ + N+LL + AKISDFGL+K + +
Sbjct: 131 ---ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
T + APE + ++KSDV++FGV+++E S
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWI 448
E +AE ++ ++ + +V +IG E + L+ E A+ G L +L QNR + I
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ--QNRHVKDKNII 130
Query: 449 MRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGE 508
++ + G++Y+ E +++VHRD+ + N+LL + AKISDFGL+K + +
Sbjct: 131 ---ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
T + APE + ++KSDV++FGV+++E S
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 130 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 183 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 127 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 180 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 19/199 (9%)
Query: 359 LGHGTYGSVYYGNIRNQE-----VAIK---RMTATKTKE-FMAEMKILCKVHHSNLVELI 409
+G G +G V+ G + E VAIK T+ +E F+ E + + H ++V+LI
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 410 GYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTK 469
G TE+ +++I E G L+S L Q R + SL + A + L Y+
Sbjct: 81 G-VITENPVWIIMELCTLGELRSFL---QVR-KYSLDLASLILYAYQLSTALAYLE---S 132
Query: 470 THYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDG 529
+VHRDI + N+L+ S K+ DFGL++ + ++ +A+ K+ ++APE +
Sbjct: 133 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 190
Query: 530 LATAKSDVYAFGVVLFEII 548
T+ SDV+ FGV ++EI+
Sbjct: 191 RFTSASDVWMFGVCMWEIL 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 19/199 (9%)
Query: 359 LGHGTYGSVYYGNIRNQE-----VAIK---RMTATKTKE-FMAEMKILCKVHHSNLVELI 409
+G G +G V+ G + E VAIK T+ +E F+ E + + H ++V+LI
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 410 GYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTK 469
G TE+ +++I E G L+S L Q R + SL + A + L Y+
Sbjct: 80 G-VITENPVWIIMELCTLGELRSFL---QVR-KYSLDLASLILYAYQLSTALAYLE---S 131
Query: 470 THYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDG 529
+VHRDI + N+L+ S K+ DFGL++ + ++ +A+ K+ ++APE +
Sbjct: 132 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 189
Query: 530 LATAKSDVYAFGVVLFEII 548
T+ SDV+ FGV ++EI+
Sbjct: 190 RFTSASDVWMFGVCMWEIL 208
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 73 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 129
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 130 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 183 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 127 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 180 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 129 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 182 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 36 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 95 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 151
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 152 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 204
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 205 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 18 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 134 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 187 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 27/217 (12%)
Query: 347 LFATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE-------FMA---EMKI 396
+F +LG G +G+V+ G + +IK K E F A M
Sbjct: 27 IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLA 86
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRG----QTSLSWIMRVQ 452
+ + H+++V L+G L L+ +Y GSL H+ Q+RG Q L+W +++
Sbjct: 87 IGSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVR--QHRGALGPQLLLNWGVQI- 142
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVT 512
A+G+ Y+ EH VHR++ + N+LL S + +++DFG+A L+ D + +
Sbjct: 143 -----AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLL-PPDDKQLLYS 193
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ ++A E + G T +SDV+++GV ++E+++
Sbjct: 194 EAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 20/214 (9%)
Query: 347 LFATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCK 399
L + E F +G GTYG VY + + VA+K++ E + E+ +L +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQN-RGQTSLSWIMRVQIALDAA 458
++H N+V+L+ TE++L+L++E+ L L D + T + +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEF-----LSMDLKDFMDASALTGIPLPLIKSYLFQLL 116
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
+GL + H H +HRD+K N+L+++ K++DFGLA+ G T V T
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTL 170
Query: 519 GYLAPEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
Y APE L + D+++ G + E+++ +
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 113/238 (47%), Gaps = 34/238 (14%)
Query: 338 PVVFTYDEIL-FATEGFSDSSLLGHGTYGSVY----YGNIRNQ---EVAIKRMTAT---- 385
P Y+E F LG G +G V +G + +VA+K + +T
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 386 KTKEFMAEMKILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLH--------D 436
+ + M+E+KI+ + H N+V L+G + +I EY G L + L D
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD 151
Query: 437 PQNR-GQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDF 495
P ++LS + + A+G+ ++ + +HRD+ + N+LL + AKI DF
Sbjct: 152 PAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDF 208
Query: 496 GLAKLVGKTSD----GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
GLA+ + S+ G A + ++APE + D + T +SDV+++G++L+EI S
Sbjct: 209 GLARDIMNDSNYIVKGNARL-----PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 136/328 (41%), Gaps = 70/328 (21%)
Query: 338 PVVFTYDEIL-FATEGFSDSSLLGHGTYGSVY----YGNIRNQE---VAIKRMTA----T 385
P YD F S LG G +G V YG I++ VA+K + T
Sbjct: 25 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 84
Query: 386 KTKEFMAEMKILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR---G 441
+ + M+E+K+L + +H N+V L+G +I EY G L + L ++
Sbjct: 85 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 144
Query: 442 QTSLSWIMRV-----------QIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRA 490
+TS + IM + A+G+ ++ + +HRD+ + NILL
Sbjct: 145 KTSPA-IMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRIT 200
Query: 491 KISDFGLAKLVGKTSD----GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFE 546
KI DFGLA+ + S+ G A + ++APE + + + T +SDV+++G+ L+E
Sbjct: 201 KICDFGLARDIKNDSNYVVKGNARL-----PVKWMAPESIFNCVYTFESDVWSYGIFLWE 255
Query: 547 IISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSP-DSMSM-SSLKDYIDPNMMDLYPH 604
+ S L +SP M + S I L P
Sbjct: 256 LFS----------------------------LGSSPYPGMPVDSKFYKMIKEGFRMLSPE 287
Query: 605 DCLFKMAMLAKQCVDEDPILRPDMKQVV 632
+M + K C D DP+ RP KQ+V
Sbjct: 288 HAPAEMYDIMKTCWDADPLKRPTFKQIV 315
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWI 448
E +AE ++ ++ + +V +IG E + L+ E A+ G L +L QNR + I
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ--QNRHVKDKNII 114
Query: 449 MRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGE 508
++ + G++Y+ E +++VHRD+ + N+LL + AKISDFGL+K + +
Sbjct: 115 ---ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 168
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
T + APE + ++KSDV++FGV+++E S
Sbjct: 169 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWI 448
E +AE ++ ++ + +V +IG E + L+ E A+ G L +L QNR + I
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ--QNRHVKDKNII 128
Query: 449 MRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGE 508
++ + G++Y+ E +++VHRD+ + N+LL + AKISDFGL+K + +
Sbjct: 129 ---ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 182
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
T + APE + ++KSDV++FGV+++E S
Sbjct: 183 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 136/328 (41%), Gaps = 70/328 (21%)
Query: 338 PVVFTYDEIL-FATEGFSDSSLLGHGTYGSVY----YGNIRNQE---VAIKRMTA----T 385
P YD F S LG G +G V YG I++ VA+K + T
Sbjct: 32 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 91
Query: 386 KTKEFMAEMKILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR---G 441
+ + M+E+K+L + +H N+V L+G +I EY G L + L ++
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 151
Query: 442 QTSLSWIMRV-----------QIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRA 490
+TS + IM + A+G+ ++ + +HRD+ + NILL
Sbjct: 152 KTSPA-IMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRIT 207
Query: 491 KISDFGLAKLVGKTSD----GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFE 546
KI DFGLA+ + S+ G A + ++APE + + + T +SDV+++G+ L+E
Sbjct: 208 KICDFGLARDIKNDSNYVVKGNARL-----PVKWMAPESIFNCVYTFESDVWSYGIFLWE 262
Query: 547 IISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSP-DSMSM-SSLKDYIDPNMMDLYPH 604
+ S L +SP M + S I L P
Sbjct: 263 LFS----------------------------LGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 605 DCLFKMAMLAKQCVDEDPILRPDMKQVV 632
+M + K C D DP+ RP KQ+V
Sbjct: 295 HAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 17 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 75
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 76 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 132
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 133 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 185
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 186 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 19/199 (9%)
Query: 359 LGHGTYGSVYYGNIRNQE-----VAIK---RMTATKTKE-FMAEMKILCKVHHSNLVELI 409
+G G +G V+ G + E VAIK T+ +E F+ E + + H ++V+LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 410 GYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTK 469
G TE+ +++I E G L+S L Q R + SL + A + L Y+
Sbjct: 78 G-VITENPVWIIMELCTLGELRSFL---QVR-KFSLDLASLILYAYQLSTALAYLESK-- 130
Query: 470 THYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDG 529
+VHRDI + N+L+ + K+ DFGL++ + ++ +A+ K+ ++APE +
Sbjct: 131 -RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 187
Query: 530 LATAKSDVYAFGVVLFEII 548
T+ SDV+ FGV ++EI+
Sbjct: 188 RFTSASDVWMFGVCMWEIL 206
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 5 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 64 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 120
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 121 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 174 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 135/327 (41%), Gaps = 68/327 (20%)
Query: 338 PVVFTYDEIL-FATEGFSDSSLLGHGTYGSVY----YGNIRNQE---VAIKRMTA----T 385
P YD F S LG G +G V YG I++ VA+K + T
Sbjct: 9 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 68
Query: 386 KTKEFMAEMKILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR---G 441
+ + M+E+K+L + +H N+V L+G +I EY G L + L ++
Sbjct: 69 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 128
Query: 442 QTSLSWIMRV----------QIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAK 491
+TS + + + A+G+ ++ + +HRD+ + NILL K
Sbjct: 129 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITK 185
Query: 492 ISDFGLAKLVGKTSD----GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEI 547
I DFGLA+ + S+ G A + ++APE + + + T +SDV+++G+ L+E+
Sbjct: 186 ICDFGLARDIKNDSNYVVKGNARL-----PVKWMAPESIFNCVYTFESDVWSYGIFLWEL 240
Query: 548 ISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSP-DSMSM-SSLKDYIDPNMMDLYPHD 605
S L +SP M + S I L P
Sbjct: 241 FS----------------------------LGSSPYPGMPVDSKFYKMIKEGFRMLSPEH 272
Query: 606 CLFKMAMLAKQCVDEDPILRPDMKQVV 632
+M + K C D DP+ RP KQ+V
Sbjct: 273 APAEMYDIMKTCWDADPLKRPTFKQIV 299
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 30/234 (12%)
Query: 338 PVVFTYDEIL-FATEGFSDSSLLGHGTYGSVY----YGNIRNQ---EVAIKRMTAT---- 385
P Y+E F LG G +G V +G + +VA+K + +T
Sbjct: 24 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 83
Query: 386 KTKEFMAEMKILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLH-----DPQN 439
+ + M+E+KI+ + H N+V L+G + +I EY G L + L D
Sbjct: 84 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK 143
Query: 440 RGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK 499
L + + A+G+ ++ + +HRD+ + N+LL + AKI DFGLA+
Sbjct: 144 EDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 200
Query: 500 LVGKTSD----GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ S+ G A + ++APE + D + T +SDV+++G++L+EI S
Sbjct: 201 DIMNDSNYIVKGNARL-----PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 18/213 (8%)
Query: 347 LFATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCK 399
L + E F +G GTYG VY + + VA+K++ E + E+ +L +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR 459
++H N+V+L+ TE++L+L++E+ LK + T + + +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFM---DASALTGIPLPLIKSYLFQLLQ 117
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
GL + H H +HRD+K N+L+++ K++DFGLA+ G T V T
Sbjct: 118 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLW 171
Query: 520 YLAPEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
Y APE L + D+++ G + E+++ +
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 136/328 (41%), Gaps = 70/328 (21%)
Query: 338 PVVFTYDEIL-FATEGFSDSSLLGHGTYGSVY----YGNIRNQE---VAIKRMTA----T 385
P YD F S LG G +G V YG I++ VA+K + T
Sbjct: 27 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 86
Query: 386 KTKEFMAEMKILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR---G 441
+ + M+E+K+L + +H N+V L+G +I EY G L + L ++
Sbjct: 87 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 146
Query: 442 QTSLSWIMRV-----------QIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRA 490
+TS + IM + A+G+ ++ + +HRD+ + NILL
Sbjct: 147 KTSPA-IMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRIT 202
Query: 491 KISDFGLAKLVGKTSD----GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFE 546
KI DFGLA+ + S+ G A + ++APE + + + T +SDV+++G+ L+E
Sbjct: 203 KICDFGLARDIKNDSNYVVKGNARL-----PVKWMAPESIFNCVYTFESDVWSYGIFLWE 257
Query: 547 IISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSP-DSMSM-SSLKDYIDPNMMDLYPH 604
+ S L +SP M + S I L P
Sbjct: 258 LFS----------------------------LGSSPYPGMPVDSKFYKMIKEGFRMLSPE 289
Query: 605 DCLFKMAMLAKQCVDEDPILRPDMKQVV 632
+M + K C D DP+ RP KQ+V
Sbjct: 290 HAPAEMYDIMKTCWDADPLKRPTFKQIV 317
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 27/217 (12%)
Query: 347 LFATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKE-------FMA---EMKI 396
+F +LG G +G+V+ G + +IK K E F A M
Sbjct: 9 IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLA 68
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRG----QTSLSWIMRVQ 452
+ + H+++V L+G L L+ +Y GSL H+ Q+RG Q L+W +++
Sbjct: 69 IGSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVR--QHRGALGPQLLLNWGVQI- 124
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVT 512
A+G+ Y+ EH VHR++ + N+LL S + +++DFG+A L+ D + +
Sbjct: 125 -----AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLL-PPDDKQLLYS 175
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ ++A E + G T +SDV+++GV ++E+++
Sbjct: 176 EAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWI 448
E +AE ++ ++ + +V +IG E + L+ E A+ G L +L QNR + I
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ--QNRHVKDKNII 110
Query: 449 MRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGE 508
++ + G++Y+ E +++VHRD+ + N+LL + AKISDFGL+K + +
Sbjct: 111 ---ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 164
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
T + APE + ++KSDV++FGV+++E S
Sbjct: 165 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 20/214 (9%)
Query: 347 LFATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCK 399
L + E F +G GTYG VY + + VA+K++ E + E+ +L +
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQN-RGQTSLSWIMRVQIALDAA 458
++H N+V+L+ TE++L+L++E+ L L D + T + +
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEF-----LSMDLKDFMDASALTGIPLPLIKSYLFQLL 115
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF 518
+GL + H H +HRD+K N+L+++ K++DFGLA+ G T V T
Sbjct: 116 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTL 169
Query: 519 GYLAPEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
Y APE L + D+++ G + E+++ +
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 42/211 (19%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIK-----RMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G + V + +EVA+K ++ T ++ E++I+ ++H N+V+L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 412 AATEDELFLIYEYAQKGS----LKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
TE L+L+ EYA G L +H + + I+ ++Y H+
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV---------SAVQYCHQ- 132
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF----GYLAP 523
+ VHRD+K+ N+LLD KI+DFG + E TV + TF Y AP
Sbjct: 133 --KYIVHRDLKAENLLLDGDMNIKIADFGFS--------NEFTVGNKLDTFCGSPPYAAP 182
Query: 524 EYLT----DGLATAKSDVYAFGVVLFEIISG 550
E DG + DV++ GV+L+ ++SG
Sbjct: 183 ELFQGKKYDG---PEVDVWSLGVILYTLVSG 210
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 36/225 (16%)
Query: 353 FSDSSLLGHGTYGSVYYGN--IRNQEVAIKRMTATKTK--EFMAEMKILCKVHHS----- 403
F + ++LG G +G V + ++ AIK++ T+ K ++E+ +L ++H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRY 67
Query: 404 --------NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIAL 455
N V+ + LF+ EY + +L +H Q W + QI L
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQI-L 126
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD--------- 506
+A L YIH +HR++K NI +D + KI DFGLAK V ++ D
Sbjct: 127 EA---LSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 507 --GEATVTKVVGTFGYLAPEYLT-DGLATAKSDVYAFGVVLFEII 548
+T +GT Y+A E L G K D Y+ G++ FE I
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWI 448
E +AE ++ ++ + +V +IG E + L+ E A+ G L +L QNR + I
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ--QNRHVKDKNII 120
Query: 449 MRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGE 508
++ + G++Y+ E +++VHRD+ + N+LL + AKISDFGL+K + +
Sbjct: 121 ---ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
T + APE + ++KSDV++FGV+++E S
Sbjct: 175 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWI 448
E +AE ++ ++ + +V +IG E + L+ E A+ G L +L QNR + I
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ--QNRHVKDKNII 108
Query: 449 MRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGE 508
++ + G++Y+ E +++VHRD+ + N+LL + AKISDFGL+K + +
Sbjct: 109 ---ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 162
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
T + APE + ++KSDV++FGV+++E S
Sbjct: 163 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 29/214 (13%)
Query: 353 FSDSSLLGHGTYGSVYYGNIR--NQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIG 410
F + L+G G +G V+ R + IKR+ K E+K L K+ H N+V G
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA-EREVKALAKLDHVNIVHYNG 71
Query: 411 YAATEDE----------------LFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIA 454
D LF+ E+ KG+L+ + + RG+ L ++ +++
Sbjct: 72 CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE--KRRGE-KLDKVLALELF 128
Query: 455 LDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKV 514
+G++YIH ++RD+K SNI L + KI DFGL + +DG+ +K
Sbjct: 129 EQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGL--VTSLKNDGKRXRSK- 182
Query: 515 VGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEII 548
GT Y++PE ++ + D+YA G++L E++
Sbjct: 183 -GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G YG V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 125
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 126 ITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 28/214 (13%)
Query: 348 FATEGFSDSSLLGHGTYGSV----------YYG-NIRNQEVAIKRMTATKTKEFMAEMKI 396
++ + F LG G++G V YY + +E+ ++ T + E +
Sbjct: 3 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND---ERLM 59
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD 456
L V H ++ + G ++F+I +Y + G L S L Q R ++ ++ L
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCL- 117
Query: 457 AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVG 516
LEY+H ++RD+K NILLD KI+DFG AK V + + G
Sbjct: 118 ---ALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT------YXLCG 165
Query: 517 TFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
T Y+APE ++ D ++FG++++E+++G
Sbjct: 166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVH 401
+ E F +G GTYG VY + + VA+K++ E + E+ +L +++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 402 HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
H N+V+L+ TE++L+L++E+ LK + T + + +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFM---DASALTGIPLPLIKSYLFQLLQGL 117
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+ H H +HRD+K N+L+++ K++DFGLA+ G T V T Y
Sbjct: 118 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV---RTYXHEVVTLWYR 171
Query: 522 APEYLTD-GLATAKSDVYAFGVVLFEIISGK 551
APE L + D+++ G + E+++ +
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 38/209 (18%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIK-----RMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G + V + +EVAIK ++ T ++ E++I+ ++H N+V+L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 412 AATEDELFLIYEYAQKGS----LKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
TE L+LI EYA G L +H + ++ I+ ++Y H+
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV---------SAVQYCHQ- 132
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAK--LVGKTSDGEATVTKVVGTFGYLAPEY 525
VHRD+K+ N+LLD+ KI+DFG + VG D G Y APE
Sbjct: 133 --KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA------FCGAPPYAAPEL 184
Query: 526 LT----DGLATAKSDVYAFGVVLFEIISG 550
DG + DV++ GV+L+ ++SG
Sbjct: 185 FQGKKYDG---PEVDVWSLGVILYTLVSG 210
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G YG V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 124
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 125 ITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 22/208 (10%)
Query: 355 DSSLLGHGTYGSVYYG-NIRNQ-EVAIKRMTATKTK---EFMAEMKILCKVHHSNLVELI 409
D +LG GTYG VY G ++ NQ +AIK + ++ E+ + + H N+V+ +
Sbjct: 26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYL 85
Query: 410 GYAATEDELFLIYEYAQKGSLKSHLHD---PQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G + + + E GSL + L P + ++ + + QI GL+Y+H+
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-QI----LEGLKYLHD 140
Query: 467 HTKTHYVHRDIKSSNILLDS-AFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEY 525
+ VHRDIK N+L+++ + KISDFG +K + + T T GT Y+APE
Sbjct: 141 N---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEI 194
Query: 526 LTDGLA--TAKSDVYAFGVVLFEIISGK 551
+ G +D+++ G + E+ +GK
Sbjct: 195 IDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 111/233 (47%), Gaps = 24/233 (10%)
Query: 329 GTDVFDMEKPVVFTYDEILFATEGFSDSSLLGHGTYGSVYY--GNIRNQEVAIKRMTATK 386
G + + P +F ++ + +LG G++G V I QE A+K ++ +
Sbjct: 10 GRENLYFQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ 69
Query: 387 TKE------FMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR 440
K+ + E+++L ++ H N+++L + + +L+ E G L + +
Sbjct: 70 VKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF 129
Query: 441 GQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFR---AKISDFGL 497
+ + I+R ++ G+ Y+H K VHRD+K N+LL+S + +I DFGL
Sbjct: 130 SEVDAARIIRQVLS-----GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGL 181
Query: 498 AKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ + + +GT Y+APE L G K DV++ GV+L+ ++SG
Sbjct: 182 STHF----EASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 229
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 23/203 (11%)
Query: 358 LLGHGTYGSVYY--GNIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHSNLVELIG 410
+LG G++G V I QE A+K + K + E+++L K+ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 411 YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
+++ E G L + + + + I++ + G+ Y+H+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS-----GITYMHKH--- 140
Query: 471 HYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
+ VHRD+K NILL+S + KI DFGL+ + + + +GT Y+APE L
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT----KMKDRIGTAYYIAPEVLR 196
Query: 528 DGLATAKSDVYAFGVVLFEIISG 550
G K DV++ GV+L+ ++SG
Sbjct: 197 -GTYDEKCDVWSAGVILYILLSG 218
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 30/234 (12%)
Query: 338 PVVFTYDEIL-FATEGFSDSSLLGHGTYGSVY----YGNIRNQ---EVAIKRMTAT---- 385
P Y+E F LG G +G V +G + +VA+K + +T
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 386 KTKEFMAEMKILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLH-----DPQN 439
+ + M+E+KI+ + H N+V L+G + +I EY G L + L D
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK 151
Query: 440 RGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK 499
L + + A+G+ ++ + +HRD+ + N+LL + AKI DFGLA+
Sbjct: 152 EDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 208
Query: 500 LVGKTSD----GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ S+ G A + ++APE + D + T +SDV+++G++L+EI S
Sbjct: 209 DIMNDSNYIVKGNARL-----PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 338 PVVFTYDEILFATEGFSDSSLLGHGTYGSVYY--GNIRNQEVAIKRMTATKTKE------ 389
P +F ++ + +LG G++G V I QE A+K ++ + K+
Sbjct: 13 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 72
Query: 390 FMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIM 449
+ E+++L ++ H N+++L + + +L+ E G L + + + + I+
Sbjct: 73 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 132
Query: 450 RVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSD 506
R ++ G+ Y+H K VHRD+K N+LL+S + +I DFGL+ +
Sbjct: 133 RQVLS-----GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF----E 180
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ +GT Y+APE L G K DV++ GV+L+ ++SG
Sbjct: 181 ASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 128/288 (44%), Gaps = 37/288 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNIRNQEVAIKR------MTATKTKEFMAEMKILCKVHHSNLV 406
F S LG G G V+ + + + + R + + + E+++L + + +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 407 ELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G ++ E+ + E+ GSL L + G+ + +V IA+ +GL Y+ E
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLRE 122
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL 526
K +HRD+K SNIL++S K+ DFG++ G+ D A VGT Y++PE L
Sbjct: 123 KHKI--MHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMA--NSFVGTRSYMSPERL 175
Query: 527 TDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMS 586
+ +SD+++ G+ L E+ G+ I + +K R +A F
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD---AKEDSRPPMAIF------------- 219
Query: 587 MSSLKDYIDPNMMDLYPHDCL-FKMAMLAKQCVDEDPILRPDMKQVVI 633
L DYI P + +C+ ++P R D+KQ+++
Sbjct: 220 --ELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 265
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 111/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG---------NIRNQEVAIKRMTATKT-KEFMAEMK 395
IL TE F +LG G +G+VY G I + ++ T+ K KE + E
Sbjct: 45 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAY 103
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 104 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 160
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 161 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 213
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 214 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 111/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 8 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 66
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 67 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 123
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 124 ----AEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 176
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 177 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G YG V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 125
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 126 ITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELLKR 181
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 112/238 (47%), Gaps = 34/238 (14%)
Query: 338 PVVFTYDEIL-FATEGFSDSSLLGHGTYGSVY----YGNIRNQ---EVAIKRMTAT---- 385
P Y+E F LG G +G V +G + +VA+K + +T
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 386 KTKEFMAEMKILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTS 444
+ + M+E+KI+ + H N+V L+G + +I EY G L + L +T
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD 151
Query: 445 LSWIMR---------VQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDF 495
++ + + + A+G+ ++ + +HRD+ + N+LL + AKI DF
Sbjct: 152 PAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDF 208
Query: 496 GLAKLVGKTSD----GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
GLA+ + S+ G A + ++APE + D + T +SDV+++G++L+EI S
Sbjct: 209 GLARDIMNDSNYIVKGNARL-----PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWI 448
E +AE ++ ++ + +V +IG E + L+ E A+ G L +L QNR + I
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ--QNRHVKDKNII 472
Query: 449 MRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGE 508
++ + G++Y+ E +++VHRD+ + N+LL + AKISDFGL+K + +
Sbjct: 473 ---ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
T + APE + ++KSDV++FGV+++E S
Sbjct: 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G YG V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 124
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 125 ITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 22/209 (10%)
Query: 354 SDSSLLGHGTYGSVYYG-NIRNQ-EVAIKRMTATKTK---EFMAEMKILCKVHHSNLVEL 408
D +LG GTYG VY G ++ NQ +AIK + ++ E+ + + H N+V+
Sbjct: 11 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 70
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLHD---PQNRGQTSLSWIMRVQIALDAARGLEYIH 465
+G + + + E GSL + L P + ++ + + QI GL+Y+H
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-QI----LEGLKYLH 125
Query: 466 EHTKTHYVHRDIKSSNILLDS-AFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
++ VHRDIK N+L+++ + KISDFG +K + + T T GT Y+APE
Sbjct: 126 DN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPE 179
Query: 525 YLTDGLA--TAKSDVYAFGVVLFEIISGK 551
+ G +D+++ G + E+ +GK
Sbjct: 180 IIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 389 EFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWI 448
E +AE ++ ++ + +V +IG E + L+ E A+ G L +L QNR + I
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQ--QNRHVKDKNII 473
Query: 449 MRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGE 508
++ + G++Y+ E +++VHRD+ + N+LL + AKISDFGL+K + +
Sbjct: 474 ---ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 527
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
T + APE + ++KSDV++FGV+++E S
Sbjct: 528 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 24/213 (11%)
Query: 350 TEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHS 403
E + LG G YG V + + VA+K + + + E+ I ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAAR 459
N+V+ G+ + +L EY G L + P+ Q +M
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------- 116
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
G+ Y+H TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT
Sbjct: 117 GVVYLHGIGITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLP 172
Query: 520 YLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
Y+APE L A+ DV++ G+VL +++G+
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 338 PVVFTYDEILFATEGFSDSSLLGHGTYGSVYY--GNIRNQEVAIKRMTATKTKE------ 389
P +F ++ + +LG G++G V I QE A+K ++ + K+
Sbjct: 37 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 96
Query: 390 FMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIM 449
+ E+++L ++ H N+++L + + +L+ E G L + + + + I+
Sbjct: 97 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 156
Query: 450 RVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSD 506
R ++ G+ Y+H K VHRD+K N+LL+S + +I DFGL+ +
Sbjct: 157 RQVLS-----GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF----E 204
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ +GT Y+APE L G K DV++ GV+L+ ++SG
Sbjct: 205 ASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 24/213 (11%)
Query: 350 TEGFSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHS 403
E + LG G YG V + + VA+K + + + E+ I ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAAR 459
N+V+ G+ + +L EY G L + P+ Q +M
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------- 115
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
G+ Y+H TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT
Sbjct: 116 GVVYLHGIGITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLP 171
Query: 520 YLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
Y+APE L A+ DV++ G+VL +++G+
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 338 PVVFTYDEILFATEGFSDSSLLGHGTYGSVYY--GNIRNQEVAIKRMTATKTKE------ 389
P +F ++ + +LG G++G V I QE A+K ++ + K+
Sbjct: 36 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 95
Query: 390 FMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIM 449
+ E+++L ++ H N+++L + + +L+ E G L + + + + I+
Sbjct: 96 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 155
Query: 450 RVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSD 506
R ++ G+ Y+H K VHRD+K N+LL+S + +I DFGL+ +
Sbjct: 156 RQVLS-----GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF----E 203
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ +GT Y+APE L G K DV++ GV+L+ ++SG
Sbjct: 204 ASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 34/262 (12%)
Query: 359 LGHGTYGSVYYGNI-----RNQEVAIKRMTA------TKTKEFMAEMKILCKVHHSNLVE 407
LG G++G V G + VA+K + +F+ E+ + + H NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
L G T + ++ E A GSL L +++G L + R A+ A G+ Y+
Sbjct: 76 LYGVVLTP-PMKMVTELAPLGSLLDRLR--KHQGHFLLGTLSRY--AVQVAEGMGYLE-- 128
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
++HRD+ + N+LL + KI DFGL + + + D F + APE L
Sbjct: 129 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 528 DGLATAKSDVYAFGVVLFEIIS-GKEAIIRTEG-----MVSKNQER--------RSLASF 573
+ SD + FGV L+E+ + G+E I G + K ER + + +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNV 247
Query: 574 MLAALRNSP-DSMSMSSLKDYI 594
M+ + P D + +L+D++
Sbjct: 248 MVQCWAHKPEDRPTFVALRDFL 269
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 138/307 (44%), Gaps = 55/307 (17%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFG AKL+G + + A
Sbjct: 129 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLAS 572
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 182 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----------------------- 216
Query: 573 FMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQV 631
+ P D + S + ++ P C + M+ ++C D RP +++
Sbjct: 217 -----FGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 271
Query: 632 VISLSQI 638
+I S++
Sbjct: 272 IIEFSKM 278
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G YG V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 125
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 126 ITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 19/199 (9%)
Query: 359 LGHGTYGSVYYGNIRNQE-----VAIK---RMTATKTKE-FMAEMKILCKVHHSNLVELI 409
+G G +G V+ G + E VAIK T+ +E F+ E + + H ++V+LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 410 GYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTK 469
G TE+ +++I E G L+S L Q R + SL + A + L Y+
Sbjct: 458 G-VITENPVWIIMELCTLGELRSFL---QVR-KFSLDLASLILYAYQLSTALAYLE---S 509
Query: 470 THYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDG 529
+VHRDI + N+L+ S K+ DFGL++ + ++ +A+ K+ ++APE +
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 567
Query: 530 LATAKSDVYAFGVVLFEII 548
T+ SDV+ FGV ++EI+
Sbjct: 568 RFTSASDVWMFGVCMWEIL 586
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 138/307 (44%), Gaps = 55/307 (17%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFG AKL+G + + A
Sbjct: 129 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLAS 572
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 182 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----------------------- 216
Query: 573 FMLAALRNSP-DSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQV 631
+ P D + S + ++ P C + M+ ++C D RP +++
Sbjct: 217 -----FGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 271
Query: 632 VISLSQI 638
+I S++
Sbjct: 272 IIEFSKM 278
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G YG V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 124
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 125 ITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G YG V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 124
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 125 ITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G YG V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 123
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 124 ITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 351 EGFSDSSLLGHGTYGSVYY--GNIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHS 403
E ++ +LG G++G V I QE A+K + K + E+++L K+ H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
N+++L +++ E G L + + + + I++ + G+ Y
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS-----GITY 136
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSDGEATVTKVVGTFGY 520
+H+H + VHRD+K NILL+S + KI DFGL+ + + + +GT Y
Sbjct: 137 MHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT----KMKDRIGTAYY 189
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+APE L G K DV++ GV+L+ ++SG
Sbjct: 190 IAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G YG V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 125
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 126 ITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G YG V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 125
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 126 ITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G YG V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 125
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 126 ITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 351 EGFSDSSLLGHGTYGSVYY--GNIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHS 403
E ++ +LG G++G V I QE A+K + K + E+++L K+ H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
N+++L +++ E G L + + + + I++ + G+ Y
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS-----GITY 136
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSDGEATVTKVVGTFGY 520
+H+H + VHRD+K NILL+S + KI DFGL+ + + + +GT Y
Sbjct: 137 MHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT----KMKDRIGTAYY 189
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+APE L G K DV++ GV+L+ ++SG
Sbjct: 190 IAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 34/262 (12%)
Query: 359 LGHGTYGSVYYGNI-----RNQEVAIKRM------TATKTKEFMAEMKILCKVHHSNLVE 407
LG G++G V G + VA+K + +F+ E+ + + H NL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
L G T + ++ E A GSL L +++G L + R A+ A G+ Y+
Sbjct: 86 LYGVVLTP-PMKMVTELAPLGSLLDRLR--KHQGHFLLGTLSRY--AVQVAEGMGYLE-- 138
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
++HRD+ + N+LL + KI DFGL + + + D F + APE L
Sbjct: 139 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 197
Query: 528 DGLATAKSDVYAFGVVLFEIIS-GKEAIIRTEG-----MVSKNQER--------RSLASF 573
+ SD + FGV L+E+ + G+E I G + K ER + + +
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNV 257
Query: 574 MLAALRNSP-DSMSMSSLKDYI 594
M+ + P D + +L+D++
Sbjct: 258 MVQCWAHKPEDRPTFVALRDFL 279
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G YG V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 125
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 126 ITH---RDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G YG V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 124
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 125 ITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 34/262 (12%)
Query: 359 LGHGTYGSVYYGNI-----RNQEVAIKRM------TATKTKEFMAEMKILCKVHHSNLVE 407
LG G++G V G + VA+K + +F+ E+ + + H NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
L G T + ++ E A GSL L +++G L + R A+ A G+ Y+
Sbjct: 80 LYGVVLTP-PMKMVTELAPLGSLLDRLR--KHQGHFLLGTLSRY--AVQVAEGMGYLE-- 132
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
++HRD+ + N+LL + KI DFGL + + + D F + APE L
Sbjct: 133 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 528 DGLATAKSDVYAFGVVLFEIIS-GKEAIIRTEG-----MVSKNQER--------RSLASF 573
+ SD + FGV L+E+ + G+E I G + K ER + + +
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNV 251
Query: 574 MLAALRNSP-DSMSMSSLKDYI 594
M+ + P D + +L+D++
Sbjct: 252 MVQCWAHKPEDRPTFVALRDFL 273
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G YG V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 124
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 125 ITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G YG V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 124
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 125 ITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G YG V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 124
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 125 ITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G YG V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 124
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 125 ITH---RDIKPENLLLDERDNLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 111/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 74 VMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 130
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFG AKL+G + + A
Sbjct: 131 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 183
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 184 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 19/199 (9%)
Query: 359 LGHGTYGSVYYGNIRNQE-----VAIK---RMTATKTKE-FMAEMKILCKVHHSNLVELI 409
+G G +G V+ G + E VAIK T+ +E F+ E + + H ++V+LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 410 GYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTK 469
G TE+ +++I E G L+S L Q R + SL + A + L Y+
Sbjct: 458 G-VITENPVWIIMELCTLGELRSFL---QVR-KFSLDLASLILYAYQLSTALAYLE---S 509
Query: 470 THYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDG 529
+VHRDI + N+L+ + K+ DFGL++ + ++ +A+ K+ ++APE +
Sbjct: 510 KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 567
Query: 530 LATAKSDVYAFGVVLFEII 548
T+ SDV+ FGV ++EI+
Sbjct: 568 RFTSASDVWMFGVCMWEIL 586
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 111/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +L G +G+VY G I E VAIK + + KE + E
Sbjct: 18 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 134 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 187 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 135/302 (44%), Gaps = 33/302 (10%)
Query: 353 FSDSSLLGHGTYGSVYYGNIRNQEVAIKR------MTATKTKEFMAEMKILCKVHHSNLV 406
F S LG G G V+ + + + + R + + + E+++L + + +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 407 ELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G ++ E+ + E+ GSL L + G+ + +V IA+ +GL Y+ E
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLRE 122
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL 526
K +HRD+K SNIL++S K+ DFG++ G+ D A VGT Y++PE L
Sbjct: 123 KHKI--MHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMA--NSFVGTRSYMSPERL 175
Query: 527 TDGLATAKSDVYAFGVVLFEIISGKEAI-------------IRTEGMVSKNQERRSLASF 573
+ +SD+++ G+ L E+ G+ I + EG ++ R
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 235
Query: 574 MLAAL-RNSPDSMSMSSLKDYIDPNMMDLYPHDCL-FKMAMLAKQCVDEDPILRPDMKQV 631
L++ +S M++ L DYI P + +C+ ++P R D+KQ+
Sbjct: 236 PLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
Query: 632 VI 633
++
Sbjct: 296 MV 297
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 34/262 (12%)
Query: 359 LGHGTYGSVYYGNI-----RNQEVAIKRM------TATKTKEFMAEMKILCKVHHSNLVE 407
LG G++G V G + VA+K + +F+ E+ + + H NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
L G T + ++ E A GSL L +++G L + R A+ A G+ Y+
Sbjct: 76 LYGVVLTP-PMKMVTELAPLGSLLDRLR--KHQGHFLLGTLSRY--AVQVAEGMGYLE-- 128
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
++HRD+ + N+LL + KI DFGL + + + D F + APE L
Sbjct: 129 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 528 DGLATAKSDVYAFGVVLFEIIS-GKEAIIRTEG-----MVSKNQER--------RSLASF 573
+ SD + FGV L+E+ + G+E I G + K ER + + +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNV 247
Query: 574 MLAALRNSP-DSMSMSSLKDYI 594
M+ + P D + +L+D++
Sbjct: 248 MVQCWAHKPEDRPTFVALRDFL 269
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 111/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 72 VMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 128
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFG AKL+G + + A
Sbjct: 129 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 182 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 359 LGHGTYGSVYYG-NIRN--QEVAIKRMTATKTKEFM--------AEMKILCKVHHSNLVE 407
+G G YG V+ +++N + VA+KR+ +E M A ++ L H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 408 L-----IGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAARGL 461
L + E +L L++E+ + L ++L P+ T M Q+ RGL
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLL----RGL 133
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H H VHRD+K NIL+ S+ + K++DFGLA++ + +T VV T Y
Sbjct: 134 DFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS----FQMALTSVVVTLWYR 186
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGK 551
APE L D+++ G + E+ K
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 135/302 (44%), Gaps = 33/302 (10%)
Query: 353 FSDSSLLGHGTYGSVYYGNIRNQEVAIKR------MTATKTKEFMAEMKILCKVHHSNLV 406
F S LG G G V+ + + + + R + + + E+++L + + +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 407 ELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G ++ E+ + E+ GSL L + G+ + +V IA+ +GL Y+ E
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLRE 122
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL 526
K +HRD+K SNIL++S K+ DFG++ G+ D A VGT Y++PE L
Sbjct: 123 KHKI--MHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMA--NSFVGTRSYMSPERL 175
Query: 527 TDGLATAKSDVYAFGVVLFEIISGKEAI-------------IRTEGMVSKNQERRSLASF 573
+ +SD+++ G+ L E+ G+ I + EG ++ R
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 235
Query: 574 MLAAL-RNSPDSMSMSSLKDYIDPNMMDLYPHDCL-FKMAMLAKQCVDEDPILRPDMKQV 631
L++ +S M++ L DYI P + +C+ ++P R D+KQ+
Sbjct: 236 PLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
Query: 632 VI 633
++
Sbjct: 296 MV 297
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G YG V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 124
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 125 ITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 32/220 (14%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-------NIRNQEVAIKRM----TATKTKEFMAEM 394
IL TE +LG G +G+VY G N++ VAIK + + KE + E
Sbjct: 13 ILKETE-LRKVKVLGSGAFGTVYKGIWIPDGENVK-IPVAIKVLRENTSPKANKEILDEA 70
Query: 395 KILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRG----QTSLSWIMR 450
++ V + L+G T + L+ + G L H+ +NRG Q L+W M+
Sbjct: 71 YVMAGVGSPYVSRLLGICLTS-TVQLVTQLMPYGCLLDHVR--ENRGRLGSQDLLNWCMQ 127
Query: 451 VQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEA 509
+ A+G+ Y+ + VHRD+ + N+L+ S KI+DFGLA+L+ ++ A
Sbjct: 128 I------AKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA 178
Query: 510 TVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + T +SDV+++GV ++E+++
Sbjct: 179 DGGKV--PIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 135/302 (44%), Gaps = 33/302 (10%)
Query: 353 FSDSSLLGHGTYGSVYYGNIRNQEVAIKR------MTATKTKEFMAEMKILCKVHHSNLV 406
F S LG G G V+ + + + + R + + + E+++L + + +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 407 ELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G ++ E+ + E+ GSL L + G+ + +V IA+ +GL Y+ E
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLRE 122
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL 526
K +HRD+K SNIL++S K+ DFG++ G+ D A VGT Y++PE L
Sbjct: 123 KHKI--MHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMA--NSFVGTRSYMSPERL 175
Query: 527 TDGLATAKSDVYAFGVVLFEIISGKEAI-------------IRTEGMVSKNQERRSLASF 573
+ +SD+++ G+ L E+ G+ I + EG ++ R
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 235
Query: 574 MLAAL-RNSPDSMSMSSLKDYIDPNMMDLYPHDCL-FKMAMLAKQCVDEDPILRPDMKQV 631
L++ +S M++ L DYI P + +C+ ++P R D+KQ+
Sbjct: 236 PLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
Query: 632 VI 633
++
Sbjct: 296 MV 297
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 135/302 (44%), Gaps = 33/302 (10%)
Query: 353 FSDSSLLGHGTYGSVYYGNIRNQEVAIKR------MTATKTKEFMAEMKILCKVHHSNLV 406
F S LG G G V+ + + + + R + + + E+++L + + +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 407 ELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G ++ E+ + E+ GSL L + G+ + +V IA+ +GL Y+ E
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLRE 122
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL 526
K +HRD+K SNIL++S K+ DFG++ G+ D A VGT Y++PE L
Sbjct: 123 KHKI--MHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMA--NSFVGTRSYMSPERL 175
Query: 527 TDGLATAKSDVYAFGVVLFEIISGKEAI-------------IRTEGMVSKNQERRSLASF 573
+ +SD+++ G+ L E+ G+ I + EG ++ R
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 235
Query: 574 MLAAL-RNSPDSMSMSSLKDYIDPNMMDLYPHDCL-FKMAMLAKQCVDEDPILRPDMKQV 631
L++ +S M++ L DYI P + +C+ ++P R D+KQ+
Sbjct: 236 PLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
Query: 632 VI 633
++
Sbjct: 296 MV 297
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 359 LGHGTYGSVYYGNIRNQ---------EVAIKRMTATKTKEFMAEMKILCKVHHSNLVELI 409
+G G+YG IR + E+ MT + + ++E+ +L ++ H N+V
Sbjct: 14 IGTGSYGRC--QKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 410 GYA--ATEDELFLIYEYAQKGSLKSHL-HDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
T L+++ EY + G L S + + R +++RV L A L+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA--LKECHR 129
Query: 467 HTKTHY--VHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
+ + +HRD+K +N+ LD K+ DFGLA+++ D + VGT Y++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED---FAKEFVGTPYYMSPE 186
Query: 525 YLTDGLATAKSDVYAFGVVLFEI 547
+ KSD+++ G +L+E+
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 111/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFG AKL+G + + A
Sbjct: 127 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 179
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 180 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 137/303 (45%), Gaps = 35/303 (11%)
Query: 353 FSDSSLLGHGTYGSVYYGNIRNQEVAIKR------MTATKTKEFMAEMKILCKVHHSNLV 406
F S LG G G V+ + + + + R + + + E+++L + + +V
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 407 ELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G ++ E+ + E+ GSL L + G+ + +V IA+ +GL Y+ E
Sbjct: 130 GFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLRE 184
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL 526
K +HRD+K SNIL++S K+ DFG++ G+ D A VGT Y++PE L
Sbjct: 185 KHKI--MHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMA--NSFVGTRSYMSPERL 237
Query: 527 TDGLATAKSDVYAFGVVLFEIISGKEAI-------------IRTEGMVSKNQERRSLASF 573
+ +SD+++ G+ L E+ G+ I + EG ++ R
Sbjct: 238 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 297
Query: 574 MLAAL-RNSPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAM--LAKQCVDEDPILRPDMKQ 630
L++ +S M++ L DYI P +F + +C+ ++P R D+KQ
Sbjct: 298 PLSSYGMDSRPPMAIFELLDYIVNEPPPKLP-SAVFSLEFQDFVNKCLIKNPAERADLKQ 356
Query: 631 VVI 633
+++
Sbjct: 357 LMV 359
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 111/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +LG G +G+VY G I E VAIK + + KE + E
Sbjct: 18 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFG AKL+G + + A
Sbjct: 134 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 186
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 187 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 351 EGFSDSSLLGHGTYGSVYY---------GNIRNQEVAIKRM---TATKTKEFMAEMKILC 398
E F +LG G YG V+ G I +V K M A T AE IL
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRG----QTSLSWIMRVQIA 454
+V H +V+LI T +L+LI EY G L L + G T+ ++ + +A
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLAEISMA 133
Query: 455 LDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKV 514
L H H K ++RD+K NI+L+ K++DFGL K DG T T
Sbjct: 134 LG--------HLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHT-F 181
Query: 515 VGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
GT Y+APE L D ++ G +++++++G
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 111/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +L G +G+VY G I E VAIK + + KE + E
Sbjct: 11 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 70 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 126
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 127 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 180 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 111/217 (51%), Gaps = 26/217 (11%)
Query: 346 ILFATEGFSDSSLLGHGTYGSVYYG-NIRNQE-----VAIKRM----TATKTKEFMAEMK 395
IL TE F +L G +G+VY G I E VAIK + + KE + E
Sbjct: 18 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 396 ILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR--GQTSLSWIMRVQI 453
++ V + ++ L+G T + LI + G L ++ + ++ Q L+W +++
Sbjct: 77 VMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 133
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVG-KTSDGEATVT 512
A+G+ Y+ + VHRD+ + N+L+ + KI+DFGLAKL+G + + A
Sbjct: 134 ----AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
KV ++A E + + T +SDV+++GV ++E+++
Sbjct: 187 KV--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 34/262 (12%)
Query: 359 LGHGTYGSVYYGNI-----RNQEVAIKRM------TATKTKEFMAEMKILCKVHHSNLVE 407
LG G++G V G + VA+K + +F+ E+ + + H NL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
L G T + ++ E A GSL L +++G L + R A+ A G+ Y+
Sbjct: 86 LYGVVLTP-PMKMVTELAPLGSLLDRLR--KHQGHFLLGTLSRY--AVQVAEGMGYLE-- 138
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
++HRD+ + N+LL + KI DFGL + + + D F + APE L
Sbjct: 139 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 197
Query: 528 DGLATAKSDVYAFGVVLFEIIS-GKEAIIRTEG-----MVSKNQER--------RSLASF 573
+ SD + FGV L+E+ + G+E I G + K ER + + +
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNV 257
Query: 574 MLAALRNSP-DSMSMSSLKDYI 594
M+ + P D + +L+D++
Sbjct: 258 MVQCWAHKPEDRPTFVALRDFL 279
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 25/255 (9%)
Query: 351 EGFSDSSLLGHGTYGSVYYG-NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHSN 404
E + +G GTYG VY N + A+K++ K E + E+ IL ++ HSN
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
+V+L T+ L L++E+ L L + + L + L G+ Y
Sbjct: 62 IVKLYDVIHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
H+ +HRD+K N+L++ KI+DFGLA+ G T V T Y AP+
Sbjct: 117 HDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV---RKYTHEVVTLWYRAPD 170
Query: 525 YLTDGLATAKS-DVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPD 583
L + + D+++ G + E+++G G+ +Q R F + NS +
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF---PGVSEADQLMR---IFRILGTPNSKN 224
Query: 584 SMSMSSLKDYIDPNM 598
+++ L Y DPN
Sbjct: 225 WPNVTELPKY-DPNF 238
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 34/262 (12%)
Query: 359 LGHGTYGSVYYGNI-----RNQEVAIKRM------TATKTKEFMAEMKILCKVHHSNLVE 407
LG G++G V G + VA+K + +F+ E+ + + H NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
L G T + ++ E A GSL L +++G L + R A+ A G+ Y+
Sbjct: 76 LYGVVLTP-PMKMVTELAPLGSLLDRLR--KHQGHFLLGTLSRY--AVQVAEGMGYLE-- 128
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
++HRD+ + N+LL + KI DFGL + + + D F + APE L
Sbjct: 129 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 528 DGLATAKSDVYAFGVVLFEIIS-GKEAIIRTEG-----MVSKNQER--------RSLASF 573
+ SD + FGV L+E+ + G+E I G + K ER + + +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNV 247
Query: 574 MLAALRNSP-DSMSMSSLKDYI 594
M+ + P D + +L+D++
Sbjct: 248 MVQCWAHKPEDRPTFVALRDFL 269
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 359 LGHGTYGSVYYG-NIRN--QEVAIKRMTATKTKEFM--------AEMKILCKVHHSNLVE 407
+G G YG V+ +++N + VA+KR+ +E M A ++ L H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 408 L-----IGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAARGL 461
L + E +L L++E+ + L ++L P+ T M Q+ RGL
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLL----RGL 133
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H H VHRD+K NIL+ S+ + K++DFGLA++ + +T VV T Y
Sbjct: 134 DFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS----FQMALTSVVVTLWYR 186
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGK 551
APE L D+++ G + E+ K
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 25/255 (9%)
Query: 351 EGFSDSSLLGHGTYGSVYYG-NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHSN 404
E + +G GTYG VY N + A+K++ K E + E+ IL ++ HSN
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
+V+L T+ L L++E+ L L + + L + L G+ Y
Sbjct: 62 IVKLYDVIHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
H+ +HRD+K N+L++ KI+DFGLA+ G T V T Y AP+
Sbjct: 117 HDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV---RKYTHEVVTLWYRAPD 170
Query: 525 YLTDGLATAKS-DVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPD 583
L + + D+++ G + E+++G G+ +Q R F + NS +
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGAPLF---PGVSEADQLMR---IFRILGTPNSKN 224
Query: 584 SMSMSSLKDYIDPNM 598
+++ L Y DPN
Sbjct: 225 WPNVTELPKY-DPNF 238
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 359 LGHGTYGSVYYG-NIRN--QEVAIKRMTATKTKEFM--------AEMKILCKVHHSNLVE 407
+G G YG V+ +++N + VA+KR+ +E M A ++ L H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 408 L-----IGYAATEDELFLIYEYAQKGSLKSHLHD-PQNRGQTSLSWIMRVQIALDAARGL 461
L + E +L L++E+ + L ++L P+ T M Q+ RGL
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLL----RGL 133
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H H VHRD+K NIL+ S+ + K++DFGLA++ + +T VV T Y
Sbjct: 134 DFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS----FQMALTSVVVTLWYR 186
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGK 551
APE L D+++ G + E+ K
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 26/206 (12%)
Query: 352 GFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
GF+ + V+ G I + + +K + ++ E+ I + H ++V G+
Sbjct: 29 GFAKCFEISDADTKEVFAGKIVPKSLLLK---PHQREKMSMEISIHRSLAHQHVVGFHGF 85
Query: 412 AATEDELFLIYEYAQKGSL------KSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
D +F++ E ++ SL + L +P+ R + +R QI L G +Y+H
Sbjct: 86 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR------YYLR-QIVL----GCQYLH 134
Query: 466 EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEY 525
+ +HRD+K N+ L+ KI DFGLA V DGE T + GT Y+APE
Sbjct: 135 ---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKT-LCGTPNYIAPEV 188
Query: 526 LTDGLATAKSDVYAFGVVLFEIISGK 551
L+ + + DV++ G +++ ++ GK
Sbjct: 189 LSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 26/206 (12%)
Query: 352 GFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
GF+ + V+ G I + + +K + ++ E+ I + H ++V G+
Sbjct: 33 GFAKCFEISDADTKEVFAGKIVPKSLLLK---PHQREKMSMEISIHRSLAHQHVVGFHGF 89
Query: 412 AATEDELFLIYEYAQKGSL------KSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
D +F++ E ++ SL + L +P+ R + +R QI L G +Y+H
Sbjct: 90 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR------YYLR-QIVL----GCQYLH 138
Query: 466 EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEY 525
+ +HRD+K N+ L+ KI DFGLA V DGE T + GT Y+APE
Sbjct: 139 ---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKT-LCGTPNYIAPEV 192
Query: 526 LTDGLATAKSDVYAFGVVLFEIISGK 551
L+ + + DV++ G +++ ++ GK
Sbjct: 193 LSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 26/206 (12%)
Query: 352 GFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
GF+ + V+ G I + + +K + ++ E+ I + H ++V G+
Sbjct: 29 GFAKCFEISDADTKEVFAGKIVPKSLLLK---PHQREKMSMEISIHRSLAHQHVVGFHGF 85
Query: 412 AATEDELFLIYEYAQKGSL------KSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
D +F++ E ++ SL + L +P+ R + +R QI L G +Y+H
Sbjct: 86 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR------YYLR-QIVL----GCQYLH 134
Query: 466 EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEY 525
+ +HRD+K N+ L+ KI DFGLA V DGE T + GT Y+APE
Sbjct: 135 ---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKT-LCGTPNYIAPEV 188
Query: 526 LTDGLATAKSDVYAFGVVLFEIISGK 551
L+ + + DV++ G +++ ++ GK
Sbjct: 189 LSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 34/262 (12%)
Query: 359 LGHGTYGSVYYGNI-----RNQEVAIKRM------TATKTKEFMAEMKILCKVHHSNLVE 407
LG G++G V G + VA+K + +F+ E+ + + H NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
L G T + ++ E A GSL L +++G L + R A+ A G+ Y+
Sbjct: 80 LYGVVLTP-PMKMVTELAPLGSLLDRLR--KHQGHFLLGTLSRY--AVQVAEGMGYLE-- 132
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
++HRD+ + N+LL + KI DFGL + + + D F + APE L
Sbjct: 133 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 528 DGLATAKSDVYAFGVVLFEIIS-GKEAIIRTEG-----MVSKNQER--------RSLASF 573
+ SD + FGV L+E+ + G+E I G + K ER + + +
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNV 251
Query: 574 MLAALRNSP-DSMSMSSLKDYI 594
M+ + P D + +L+D++
Sbjct: 252 MVQCWAHKPEDRPTFVALRDFL 273
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 112/247 (45%), Gaps = 43/247 (17%)
Query: 338 PVVFTYDEIL-FATEGFSDSSLLGHGTYGSVY----YGNIRNQ---EVAIKRMTAT---- 385
P Y+E F LG G +G V +G + +VA+K + +T
Sbjct: 17 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 76
Query: 386 KTKEFMAEMKILCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHL---------- 434
+ + M+E+KI+ + H N+V L+G + +I EY G L + L
Sbjct: 77 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGP 136
Query: 435 -----HDPQNRGQTS---LSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDS 486
DP+ + L + + A+G+ ++ + +HRD+ + N+LL +
Sbjct: 137 SLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTN 193
Query: 487 AFRAKISDFGLAKLVGKTSD----GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGV 542
AKI DFGLA+ + S+ G A + ++APE + D + T +SDV+++G+
Sbjct: 194 GHVAKIGDFGLARDIMNDSNYIVKGNARL-----PVKWMAPESIFDCVYTVQSDVWSYGI 248
Query: 543 VLFEIIS 549
+L+EI S
Sbjct: 249 LLWEIFS 255
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 25/255 (9%)
Query: 351 EGFSDSSLLGHGTYGSVYYG-NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHSN 404
E + +G GTYG VY N + A+K++ K E + E+ IL ++ HSN
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
+V+L T+ L L++E+ L L + + L + L G+ Y
Sbjct: 62 IVKLYDVIHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
H+ +HRD+K N+L++ KI+DFGLA+ G T + T Y AP+
Sbjct: 117 HDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV---RKYTHEIVTLWYRAPD 170
Query: 525 YLTDGLATAKS-DVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPD 583
L + + D+++ G + E+++G G+ +Q R F + NS +
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF---PGVSEADQLMR---IFRILGTPNSKN 224
Query: 584 SMSMSSLKDYIDPNM 598
+++ L Y DPN
Sbjct: 225 WPNVTELPKY-DPNF 238
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 42/211 (19%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIK-----RMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G + V + +EVA+K ++ ++ ++ E++I+ ++H N+V+L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----GLEYIHEH 467
TE L+L+ EYA G + +L + W M+ + A R ++Y H+
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYL--------VAHGW-MKEKEARAKFRQIVSAVQYCHQ- 124
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF----GYLAP 523
VHRD+K+ N+LLD+ KI+DFG + E T + TF Y AP
Sbjct: 125 --KFIVHRDLKAENLLLDADMNIKIADFGFS--------NEFTFGNKLDTFCGSPPYAAP 174
Query: 524 EYLT----DGLATAKSDVYAFGVVLFEIISG 550
E DG + DV++ GV+L+ ++SG
Sbjct: 175 ELFQGKKYDG---PEVDVWSLGVILYTLVSG 202
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIKRMTATKTK----EFMAEMKILCKVHHSNLVELIGYA 412
LG GTY +VY G + + VA+K + + + E+ +L + H+N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 413 ATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHY 472
TE L L++EY K LK +L D N + Q+ RGL Y H +
Sbjct: 70 HTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLL----RGLAYCH---RQKV 121
Query: 473 VHRDIKSSNILLDSAFRAKISDFGLAK---LVGKTSDGEATVTKVVGTFGYLAPEYL--- 526
+HRD+K N+L++ K++DFGLA+ + KT D E V T Y P+ L
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNE------VVTLWYRPPDILLGS 175
Query: 527 TDGLATAKSDVYAFGVVLFEIISGK 551
TD + + D++ G + +E+ +G+
Sbjct: 176 TD--YSTQIDMWGVGCIFYEMATGR 198
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 33/217 (15%)
Query: 351 EGFSDSSLLGHGTYGSVYY---------GNIRNQEVAIKRM---TATKTKEFMAEMKILC 398
E F +LG G YG V+ G I +V K M A T AE IL
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRG----QTSLSWIMRVQIA 454
+V H +V+LI T +L+LI EY G L L + G T+ ++ + +A
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLAEISMA 133
Query: 455 LDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKV 514
L H H K ++RD+K NI+L+ K++DFGL K S + TVT
Sbjct: 134 LG--------HLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLC----KESIHDGTVTHX 180
Query: 515 V-GTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
GT Y+APE L D ++ G +++++++G
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 34/207 (16%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIK-----RMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G + V + +EVA+K ++ ++ ++ E++I+ ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTH 471
TE L+L+ EYA G + +L + R ++ ++Y H+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQ---KF 133
Query: 472 YVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF----GYLAPEYLT 527
VHRD+K+ N+LLD+ KI+DFG + E T + TF Y APE
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS--------NEFTFGNKLDTFCGSPPYAAPELFQ 185
Query: 528 ----DGLATAKSDVYAFGVVLFEIISG 550
DG + DV++ GV+L+ ++SG
Sbjct: 186 GKKYDG---PEVDVWSLGVILYTLVSG 209
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 126/288 (43%), Gaps = 43/288 (14%)
Query: 353 FSDSSLLGHGTYGSVYYGNIRNQEVAIKR------MTATKTKEFMAEMKILCKVHHSNLV 406
F S LG G G V+ + + + + R + + + E+++L + + +V
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 407 ELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G ++ E+ + E+ GSL L + G+ + +V IA+ +GL Y+ E
Sbjct: 87 GFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLRE 141
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL 526
K +HRD+K SNIL++S K+ DFG++ G+ D A VGT Y++PE L
Sbjct: 142 KHKI--MHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMA--NSFVGTRSYMSPERL 194
Query: 527 TDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMS 586
+ +SD+++ G+ L E+ G+ I G SM+
Sbjct: 195 QGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSG------------------------SMA 230
Query: 587 MSSLKDYIDPNMMDLYPHDCL-FKMAMLAKQCVDEDPILRPDMKQVVI 633
+ L DYI P + +C+ ++P R D+KQ+++
Sbjct: 231 IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 278
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 34/207 (16%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIK-----RMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G + V + +EVA+K ++ ++ ++ E++I+ ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTH 471
TE L+L+ EYA G + +L + R ++ ++Y H+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQ---KF 133
Query: 472 YVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF----GYLAPEYLT 527
VHRD+K+ N+LLD+ KI+DFG + E T + TF Y APE
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS--------NEFTFGNKLDTFCGSPPYAAPELFQ 185
Query: 528 ----DGLATAKSDVYAFGVVLFEIISG 550
DG + DV++ GV+L+ ++SG
Sbjct: 186 GKKYDG---PEVDVWSLGVILYTLVSG 209
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 21/211 (9%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
F + F LG G +G+VY + + +A+K + ++ + + E++I
Sbjct: 12 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH 71
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR 459
+ H N++ + Y ++L+ E+A +G L L + + M + A
Sbjct: 72 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME-----ELAD 126
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
L Y HE +HRDIK N+L+ KI+DFG + + GT
Sbjct: 127 ALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS-----VHAPSLRRRXMCGTLD 178
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
YL PE + K D++ GV+ +E + G
Sbjct: 179 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 18/201 (8%)
Query: 359 LGHGTYGSVYYGNIRNQ--EVAIKRMTATKTK----EFMAEMKILCKVHHSNLVELIGYA 412
LG G +G V+ R+ E IK + +++ + AE+++L + H N++++
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 413 ATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHY 472
++++ E + G L + Q RG+ +LS ++ L Y H H
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGK-ALSEGYVAELMKQMMNALAYFHSQ---HV 145
Query: 473 VHRDIKSSNILL-DSAFRA--KISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDG 529
VH+D+K NIL D++ + KI DFGLA+L SD + T GT Y+APE
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELF--KSDEHS--TNAAGTALYMAPEVFKRD 201
Query: 530 LATAKSDVYAFGVVLFEIISG 550
+ T K D+++ GVV++ +++G
Sbjct: 202 V-TFKCDIWSAGVVMYFLLTG 221
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 21/211 (9%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
F + F LG G +G+VY + + +A+K + ++ + + E++I
Sbjct: 11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH 70
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR 459
+ H N++ + Y ++L+ E+A +G L L + + M + A
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME-----ELAD 125
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
L Y HE +HRDIK N+L+ KI+DFG + + GT
Sbjct: 126 ALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS-----VHAPSLRRRXMCGTLD 177
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
YL PE + K D++ GV+ +E + G
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 359 LGHGTYGSVYYGNIRNQ---------EVAIKRMTATKTKEFMAEMKILCKVHHSNLVELI 409
+G G+YG IR + E+ MT + + ++E+ +L ++ H N+V
Sbjct: 14 IGTGSYGRC--QKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 410 GYA--ATEDELFLIYEYAQKGSLKSHL-HDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
T L+++ EY + G L S + + R +++RV L A L+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA--LKECHR 129
Query: 467 HTKTHY--VHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
+ + +HRD+K +N+ LD K+ DFGLA+++ + T VGT Y++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT---FVGTPYYMSPE 186
Query: 525 YLTDGLATAKSDVYAFGVVLFEI 547
+ KSD+++ G +L+E+
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 26/212 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFM-AEMKILCKVHHSNLVEL- 408
++D+ ++G+G++G VY + + VAIK++ + K F E++I+ K+ H N+V L
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMRKLDHCNIVRLR 98
Query: 409 -IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
Y++ E DE++L + +Y + + H +R + +L I R L Y
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
IH HRDIK N+LLD K+ DFG AK + + GE V+ + + Y A
Sbjct: 157 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSXICSRY-YRA 209
Query: 523 PEYL---TDGLATAKSDVYAFGVVLFEIISGK 551
PE + TD T+ DV++ G VL E++ G+
Sbjct: 210 PELIFGATD--YTSSIDVWSAGCVLAELLLGQ 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 26/212 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFM-AEMKILCKVHHSNLVEL- 408
++D+ ++G+G++G VY + + VAIK++ + K F E++I+ K+ H N+V L
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMRKLDHCNIVRLR 87
Query: 409 -IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
Y++ E DE++L + +Y + + H +R + +L I R L Y
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
IH HRDIK N+LLD K+ DFG AK + + GE V+ + + Y A
Sbjct: 146 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSXICSRY-YRA 198
Query: 523 PEYL---TDGLATAKSDVYAFGVVLFEIISGK 551
PE + TD T+ DV++ G VL E++ G+
Sbjct: 199 PELIFGATD--YTSSIDVWSAGCVLAELLLGQ 228
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 359 LGHGTYGSVYYGNIRNQEV-AIKRMTATKTKE----FMAEMKILCKVHHSNLVELIGYAA 413
LG G +G VY + V A ++ TK++E +M E+ IL H N+V+L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 414 TEDELFLIYEYAQKGSLKS---HLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
E+ L+++ E+ G++ + L P Q + + LDA L Y+H++
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV----CKQTLDA---LNYLHDN--- 154
Query: 471 HYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL---- 526
+HRD+K+ NIL K++DFG++ K + +GT ++APE +
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRTIQRRDSFIGTPYWMAPEVVMCET 211
Query: 527 -TDGLATAKSDVYAFGVVLFEI 547
D K+DV++ G+ L E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 26/212 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFM-AEMKILCKVHHSNLVEL- 408
++D+ ++G+G++G VY + + VAIK++ + K F E++I+ K+ H N+V L
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMRKLDHCNIVRLR 80
Query: 409 -IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
Y++ E DE++L + +Y + + H +R + +L I R L Y
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
IH HRDIK N+LLD K+ DFG AK + + GE V+ + + Y A
Sbjct: 139 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSXICSRY-YRA 191
Query: 523 PEYL---TDGLATAKSDVYAFGVVLFEIISGK 551
PE + TD T+ DV++ G VL E++ G+
Sbjct: 192 PELIFGATD--YTSSIDVWSAGCVLAELLLGQ 221
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 18/208 (8%)
Query: 353 FSDSSLLGHGTYGSVYYGNIRNQEVAIKR------MTATKTKEFMAEMKILCKVHHSNLV 406
F S LG G G V R + + R + + + E+++L + + +V
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 77
Query: 407 ELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G ++ E+ + E+ GSL L + + + L ++++ RGL Y+ E
Sbjct: 78 GFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-----KVSIAVLRGLAYLRE 132
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL 526
K +HRD+K SNIL++S K+ DFG++ G+ D A VGT Y+APE L
Sbjct: 133 --KHQIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMA--NSFVGTRSYMAPERL 185
Query: 527 TDGLATAKSDVYAFGVVLFEIISGKEAI 554
+ +SD+++ G+ L E+ G+ I
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 359 LGHGTYGSVYYGNIRNQEV-AIKRMTATKTKE----FMAEMKILCKVHHSNLVELIGYAA 413
LG G +G VY + V A ++ TK++E +M E+ IL H N+V+L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 414 TEDELFLIYEYAQKGSLKS---HLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
E+ L+++ E+ G++ + L P Q + + LDA L Y+H++
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV----CKQTLDA---LNYLHDNK-- 155
Query: 471 HYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL---- 526
+HRD+K+ NIL K++DFG++ K + +GT ++APE +
Sbjct: 156 -IIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQRRDSFIGTPYWMAPEVVMCET 211
Query: 527 -TDGLATAKSDVYAFGVVLFEI 547
D K+DV++ G+ L E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 26/212 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFM-AEMKILCKVHHSNLVEL- 408
++D+ ++G+G++G VY + + VAIK++ + K F E++I+ K+ H N+V L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 409 -IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
Y++ E DE++L + +Y + + H +R + +L I R L Y
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
IH HRDIK N+LLD K+ DFG AK + + GE V+ + + Y A
Sbjct: 138 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSXICSRY-YRA 190
Query: 523 PEYL---TDGLATAKSDVYAFGVVLFEIISGK 551
PE + TD T+ DV++ G VL E++ G+
Sbjct: 191 PELIFGATD--YTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFM-AEMKILCKVHHSNLVEL- 408
++D+ ++G+G++G VY + + VAIK++ + K F E++I+ K+ H N+V L
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMRKLDHCNIVRLR 113
Query: 409 -IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
Y++ E DE++L + +Y + + H +R + +L I R L Y
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
IH HRDIK N+LLD K+ DFG AK + + GE V+ + + Y A
Sbjct: 172 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSXICSRY-YRA 224
Query: 523 PEYLTDGLA-TAKSDVYAFGVVLFEIISGK 551
PE + T+ DV++ G VL E++ G+
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 359 LGHGTYGSVYYGNIRNQEV-AIKRMTATKTKE----FMAEMKILCKVHHSNLVELIGYAA 413
LG G +G VY + V A ++ TK++E +M E+ IL H N+V+L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 414 TEDELFLIYEYAQKGSLKS---HLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
E+ L+++ E+ G++ + L P Q + + LDA L Y+H++
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV----CKQTLDA---LNYLHDNK-- 155
Query: 471 HYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL---- 526
+HRD+K+ NIL K++DFG++ K + +GT ++APE +
Sbjct: 156 -IIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQRRDXFIGTPYWMAPEVVMCET 211
Query: 527 -TDGLATAKSDVYAFGVVLFEI 547
D K+DV++ G+ L E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 26/212 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFM-AEMKILCKVHHSNLVEL- 408
++D+ ++G+G++G VY + + VAIK++ + K F E++I+ K+ H N+V L
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMRKLDHCNIVRLR 91
Query: 409 -IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
Y++ E DE++L + +Y + + H +R + +L I R L Y
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
IH HRDIK N+LLD K+ DFG AK + + GE V+ + + Y A
Sbjct: 150 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSXICSRY-YRA 202
Query: 523 PEYL---TDGLATAKSDVYAFGVVLFEIISGK 551
PE + TD T+ DV++ G VL E++ G+
Sbjct: 203 PELIFGATD--YTSSIDVWSAGCVLAELLLGQ 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 26/212 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFM-AEMKILCKVHHSNLVEL- 408
++D+ ++G+G++G VY + + VAIK++ + K F E++I+ K+ H N+V L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 409 -IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
Y++ E DE++L + +Y + + H +R + +L I R L Y
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
IH HRDIK N+LLD K+ DFG AK + + GE V+ + + Y A
Sbjct: 138 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSXICSRY-YRA 190
Query: 523 PEYL---TDGLATAKSDVYAFGVVLFEIISGK 551
PE + TD T+ DV++ G VL E++ G+
Sbjct: 191 PELIFGATD--YTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 26/212 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFM-AEMKILCKVHHSNLVEL- 408
++D+ ++G+G++G VY + + VAIK++ + K F E++I+ K+ H N+V L
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMRKLDHCNIVRLR 91
Query: 409 -IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
Y++ E DE++L + +Y + + H +R + +L I R L Y
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
IH HRDIK N+LLD K+ DFG AK + + GE V+ + + Y A
Sbjct: 150 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSXICSRY-YRA 202
Query: 523 PEYL---TDGLATAKSDVYAFGVVLFEIISGK 551
PE + TD T+ DV++ G VL E++ G+
Sbjct: 203 PELIFGATD--YTSSIDVWSAGCVLAELLLGQ 232
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 388 KEFMAEMKILCKVHHSNLVELIGYA--ATEDELFLIYEYAQKGS-LKSHLHDPQNRGQTS 444
++ E+ IL K+ H N+V+L+ ED L++++E +G ++ P + Q
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 445 LSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKT 504
+ D +G+EY+H +HRDIK SN+L+ KI+DFG++ K
Sbjct: 141 FYF-------QDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KG 189
Query: 505 SDGEATVTKVVGTFGYLAPEYL--TDGLATAKS-DVYAFGVVLFEIISGK 551
SD A ++ VGT ++APE L T + + K+ DV+A GV L+ + G+
Sbjct: 190 SD--ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 21/211 (9%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTK------EFMAEMKILCK 399
F + F LG G +G+VY + + +A+K + ++ + + E++I
Sbjct: 11 FTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH 70
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR 459
+ H N++ + Y ++L+ E+A +G L L + + M + A
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME-----ELAD 125
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
L Y HE +HRDIK N+L+ KI+DFG + + GT
Sbjct: 126 ALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS-----VHAPSLRRRXMCGTLD 177
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
YL PE + K D++ GV+ +E + G
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 133/302 (44%), Gaps = 33/302 (10%)
Query: 353 FSDSSLLGHGTYGSVYYGNIRNQEVAIKR------MTATKTKEFMAEMKILCKVHHSNLV 406
F S LG G G V+ + + + + R + + + E+++L + + +V
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 407 ELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G ++ E+ + E+ GSL L + G+ + +V IA+ +GL Y+ E
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLRE 149
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL 526
K +HRD+K SNIL++S K+ DFG++ G+ D A VGT Y++PE L
Sbjct: 150 KHKI--MHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMA--NSFVGTRSYMSPERL 202
Query: 527 TDGLATAKSDVYAFGVVLFEIISGKEAI-------------IRTEGMVSKNQERRSLASF 573
+ +SD+++ G+ L E+ G+ I + EG ++ R
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262
Query: 574 MLAAL-RNSPDSMSMSSLKDYIDPNMMDLYPHDCL-FKMAMLAKQCVDEDPILRPDMKQV 631
L +S M++ L DYI P + +C+ ++P R D+KQ+
Sbjct: 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 322
Query: 632 VI 633
++
Sbjct: 323 MV 324
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 26/212 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFM-AEMKILCKVHHSNLVEL- 408
++D+ ++G+G++G VY + + VAIK++ + K F E++I+ K+ H N+V L
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMRKLDHCNIVRLR 83
Query: 409 -IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
Y++ E DE++L + +Y + + H +R + +L I R L Y
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
IH HRDIK N+LLD K+ DFG AK + + GE V+ + + Y A
Sbjct: 142 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSXICSRY-YRA 194
Query: 523 PEYL---TDGLATAKSDVYAFGVVLFEIISGK 551
PE + TD T+ DV++ G VL E++ G+
Sbjct: 195 PELIFGATD--YTSSIDVWSAGCVLAELLLGQ 224
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
+H LV L TE LF + EY G L H+ Q + + +I+L
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISL----A 133
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGY 520
L Y+HE ++RD+K N+LLDS K++D+G+ K + D T + GT Y
Sbjct: 134 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNY 187
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIISGKEA--IIRTEGMVSKNQERRSLASFMLAAL 578
+APE L D +A GV++FE+++G+ I+ + +N E + +
Sbjct: 188 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 247
Query: 579 RNSPDSMSM---SSLKDYIDPN 597
R P SMS+ S LK +++ +
Sbjct: 248 R-IPRSMSVKAASVLKSFLNKD 268
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 26/212 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFM-AEMKILCKVHHSNLVEL- 408
++D+ ++G+G++G VY + + VAIK++ + K F E++I+ K+ H N+V L
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMRKLDHCNIVRLR 92
Query: 409 -IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
Y++ E DE++L + +Y + + H +R + +L I R L Y
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
IH HRDIK N+LLD K+ DFG AK + + GE V+ + + Y A
Sbjct: 151 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSYICSRY-YRA 203
Query: 523 PEYL---TDGLATAKSDVYAFGVVLFEIISGK 551
PE + TD T+ DV++ G VL E++ G+
Sbjct: 204 PELIFGATD--YTSSIDVWSAGCVLAELLLGQ 233
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 22/202 (10%)
Query: 358 LLGHGTYGSVYYGNIRN--QEVAIKRMTATKTKEF--------MAEMKILCKVHHSNLVE 407
LG G + +VY +N Q VAIK++ E + E+K+L ++ H N++
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 408 LIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
L+ + + L++++ + L+ + D N + S I + +GLEY+H+H
Sbjct: 77 LLDAFGHKSNISLVFDFMET-DLEVIIKD--NSLVLTPSHIKAYMLM--TLQGLEYLHQH 131
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT 527
+HRD+K +N+LLD K++DFGLAK G S A +VV T Y APE L
Sbjct: 132 W---ILHRDLKPNNLLLDENGVLKLADFGLAKSFG--SPNRAYXHQVV-TRWYRAPELLF 185
Query: 528 DG-LATAKSDVYAFGVVLFEII 548
+ D++A G +L E++
Sbjct: 186 GARMYGVGVDMWAVGCILAELL 207
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 26/212 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFM-AEMKILCKVHHSNLVEL- 408
++D+ ++G+G++G VY + + VAIK++ + K F E++I+ K+ H N+V L
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMRKLDHCNIVRLR 115
Query: 409 -IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
Y++ E DE++L + +Y + + H +R + +L I R L Y
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
IH HRDIK N+LLD K+ DFG AK + + GE V+ + + Y A
Sbjct: 174 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSYICSRY-YRA 226
Query: 523 PEYL---TDGLATAKSDVYAFGVVLFEIISGK 551
PE + TD T+ DV++ G VL E++ G+
Sbjct: 227 PELIFGATD--YTSSIDVWSAGCVLAELLLGQ 256
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 34/207 (16%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIK-----RMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G + V + +EVA++ ++ ++ ++ E++I+ ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTH 471
TE L+L+ EYA G + +L + R ++ ++Y H+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQ---KF 133
Query: 472 YVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTF----GYLAPEYLT 527
VHRD+K+ N+LLD+ KI+DFG + E T + TF Y APE
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS--------NEFTFGNKLDTFCGSPPYAAPELFQ 185
Query: 528 ----DGLATAKSDVYAFGVVLFEIISG 550
DG + DV++ GV+L+ ++SG
Sbjct: 186 GKKYDG---PEVDVWSLGVILYTLVSG 209
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 26/212 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFM-AEMKILCKVHHSNLVEL- 408
++D+ ++G+G++G VY + + VAIK++ + K F E++I+ K+ H N+V L
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMRKLDHCNIVRLR 107
Query: 409 -IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
Y++ E DE++L + +Y + + H +R + +L I R L Y
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
IH HRDIK N+LLD K+ DFG AK + + GE V+ + + Y A
Sbjct: 166 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSYICSRY-YRA 218
Query: 523 PEYL---TDGLATAKSDVYAFGVVLFEIISGK 551
PE + TD T+ DV++ G VL E++ G+
Sbjct: 219 PELIFGATD--YTSSIDVWSAGCVLAELLLGQ 248
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 26/212 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFM-AEMKILCKVHHSNLVEL- 408
++D+ ++G+G++G VY + + VAIK++ + K F E++I+ K+ H N+V L
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMRKLDHCNIVRLR 113
Query: 409 -IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
Y++ E DE++L + +Y + + H +R + +L I R L Y
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
IH HRDIK N+LLD K+ DFG AK + + GE V+ + + Y A
Sbjct: 172 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSYICSRY-YRA 224
Query: 523 PEYL---TDGLATAKSDVYAFGVVLFEIISGK 551
PE + TD T+ DV++ G VL E++ G+
Sbjct: 225 PELIFGATD--YTSSIDVWSAGCVLAELLLGQ 254
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 26/206 (12%)
Query: 352 GFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
GF+ + V+ G I + + +K + ++ E+ I + H ++V G+
Sbjct: 53 GFAKCFEISDADTKEVFAGKIVPKSLLLK---PHQREKMSMEISIHRSLAHQHVVGFHGF 109
Query: 412 AATEDELFLIYEYAQKGSL------KSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
D +F++ E ++ SL + L +P+ R + +R QI L G +Y+H
Sbjct: 110 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR------YYLR-QIVL----GCQYLH 158
Query: 466 EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEY 525
+ +HRD+K N+ L+ KI DFGLA V DGE + GT Y+APE
Sbjct: 159 ---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKV-LCGTPNYIAPEV 212
Query: 526 LTDGLATAKSDVYAFGVVLFEIISGK 551
L+ + + DV++ G +++ ++ GK
Sbjct: 213 LSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 26/206 (12%)
Query: 352 GFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
GF+ + V+ G I + + +K + ++ E+ I + H ++V G+
Sbjct: 51 GFAKCFEISDADTKEVFAGKIVPKSLLLK---PHQREKMSMEISIHRSLAHQHVVGFHGF 107
Query: 412 AATEDELFLIYEYAQKGSL------KSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
D +F++ E ++ SL + L +P+ R + +R QI L G +Y+H
Sbjct: 108 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR------YYLR-QIVL----GCQYLH 156
Query: 466 EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEY 525
+ +HRD+K N+ L+ KI DFGLA V DGE + GT Y+APE
Sbjct: 157 ---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKV-LCGTPNYIAPEV 210
Query: 526 LTDGLATAKSDVYAFGVVLFEIISGK 551
L+ + + DV++ G +++ ++ GK
Sbjct: 211 LSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 26/212 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFM-AEMKILCKVHHSNLVEL- 408
++D+ ++G+G++G VY + + VAIK++ + K F E++I+ K+ H N+V L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 409 -IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
Y++ E DE++L + +Y + + H +R + +L I R L Y
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
IH HRDIK N+LLD K+ DFG AK + + GE V+ + + Y A
Sbjct: 138 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSYICSRY-YRA 190
Query: 523 PEYL---TDGLATAKSDVYAFGVVLFEIISGK 551
PE + TD T+ DV++ G VL E++ G+
Sbjct: 191 PELIFGATD--YTSSIDVWSAGCVLAELLLGQ 220
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 22/196 (11%)
Query: 359 LGHGTYGSVY--YGNIRNQEVAIK----RMTATKTKEFMAEMKI--LCKVHHSNLVELIG 410
LG G++G V Y Q+VA+K ++ A + E +I L + H ++++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 411 YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
++DE+ ++ EYA + + Q + + ++ A+ EY H H
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV------EYCHRHK-- 133
Query: 471 HYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGL 530
VHRD+K N+LLD KI+DFGL+ ++ +DG T G+ Y APE ++ L
Sbjct: 134 -IVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKTS-CGSPNYAAPEVISGKL 188
Query: 531 -ATAKSDVYAFGVVLF 545
A + DV++ GV+L+
Sbjct: 189 YAGPEVDVWSCGVILY 204
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 359 LGHGTYGSVYYGNIRNQ---------EVAIKRMTATKTKEFMAEMKILCKVHHSNLVELI 409
+G G+YG IR + E+ MT + + ++E+ +L ++ H N+V
Sbjct: 14 IGTGSYGRC--QKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 410 GYA--ATEDELFLIYEYAQKGSLKSHL-HDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
T L+++ EY + G L S + + R +++RV L A L+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA--LKECHR 129
Query: 467 HTKTHY--VHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
+ + +HRD+K +N+ LD K+ DFGLA+++ + + VGT Y++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT---SFAKAFVGTPYYMSPE 186
Query: 525 YLTDGLATAKSDVYAFGVVLFEI 547
+ KSD+++ G +L+E+
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 24/224 (10%)
Query: 338 PVVFTYDEILFATEGFSDSSLLGHGTYGSVYY--GNIRNQEVAIKRMTATKTKE------ 389
P F ++ + +LG G++G V I QE A+K ++ + K+
Sbjct: 13 PGXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 72
Query: 390 FMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIM 449
+ E+++L ++ H N+ +L + + +L+ E G L + + + + I+
Sbjct: 73 LLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII 132
Query: 450 RVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSD 506
R ++ G+ Y H K VHRD+K N+LL+S + +I DFGL+ +
Sbjct: 133 RQVLS-----GITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF----E 180
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+GT Y+APE L G K DV++ GV+L+ ++SG
Sbjct: 181 ASKKXKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 22/196 (11%)
Query: 359 LGHGTYGSVY--YGNIRNQEVAIK----RMTATKTKEFMAEMKI--LCKVHHSNLVELIG 410
LG G++G V Y Q+VA+K ++ A + E +I L + H ++++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 411 YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
++DE+ ++ EYA + + Q + + ++ A+ EY H H
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV------EYCHRHK-- 127
Query: 471 HYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGL 530
VHRD+K N+LLD KI+DFGL+ ++ +DG T G+ Y APE ++ L
Sbjct: 128 -IVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKTS-CGSPNYAAPEVISGKL 182
Query: 531 -ATAKSDVYAFGVVLF 545
A + DV++ GV+L+
Sbjct: 183 YAGPEVDVWSCGVILY 198
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 26/212 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFM-AEMKILCKVHHSNLVEL- 408
++D+ ++G+G++G VY + + VAIK++ + K F E++I+ K+ H N+V L
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMRKLDHCNIVRLR 117
Query: 409 -IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
Y++ E DE++L + +Y + + H +R + +L I R L Y
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
IH HRDIK N+LLD K+ DFG AK + + GE V+ + + Y A
Sbjct: 176 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSYICSRY-YRA 228
Query: 523 PEYL---TDGLATAKSDVYAFGVVLFEIISGK 551
PE + TD T+ DV++ G VL E++ G+
Sbjct: 229 PELIFGATD--YTSSIDVWSAGCVLAELLLGQ 258
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 23/223 (10%)
Query: 338 PVVFTYDEILFATEGFSDSSLLGHGTYGSVYY--GNIRNQEVAIK--RMTATKTK---EF 390
P +F + +E + LG G YG V + + E AIK R T+ T +
Sbjct: 24 PGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKL 83
Query: 391 MAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMR 450
+ E+ +L + H N+++L + + +L+ E + G L + + + I++
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK 143
Query: 451 VQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSDG 507
++ G+ Y+H+H + VHRD+K N+LL+S + KI DFGL+ + +
Sbjct: 144 QVLS-----GVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF----EN 191
Query: 508 EATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ + + +GT Y+APE L K DV++ GV+LF +++G
Sbjct: 192 QKKMKERLGTAYYIAPEVLRKKY-DEKCDVWSIGVILFILLAG 233
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 22/196 (11%)
Query: 359 LGHGTYGSVY--YGNIRNQEVAIK----RMTATKTKEFMAEMKI--LCKVHHSNLVELIG 410
LG G++G V Y Q+VA+K ++ A + E +I L + H ++++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 411 YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
++DE+ ++ EYA + + Q + + ++ A+ EY H H
Sbjct: 72 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV------EYCHRHK-- 123
Query: 471 HYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGL 530
VHRD+K N+LLD KI+DFGL+ ++ +DG T G+ Y APE ++ L
Sbjct: 124 -IVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKTS-CGSPNYAAPEVISGKL 178
Query: 531 -ATAKSDVYAFGVVLF 545
A + DV++ GV+L+
Sbjct: 179 YAGPEVDVWSCGVILY 194
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 24/211 (11%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL-- 408
++D+ ++G+G++G VY + + VAIK++ K + E++I+ K+ H N+V L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-NRELQIMRKLDHCNIVRLRY 80
Query: 409 IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
Y++ E DE++L + +Y + + H +R + +L I R L YI
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H HRDIK N+LLD K+ DFG AK + + GE V+ + + Y AP
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSYICSRY-YRAP 191
Query: 524 EYL---TDGLATAKSDVYAFGVVLFEIISGK 551
E + TD T+ DV++ G VL E++ G+
Sbjct: 192 ELIFGATD--YTSSIDVWSAGCVLAELLLGQ 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 26/212 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFM-AEMKILCKVHHSNLVEL- 408
++D+ ++G+G++G VY + + VAIK++ + K F E++I+ K+ H N+V L
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMRKLDHCNIVRLR 84
Query: 409 -IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
Y++ E DE++L + +Y + + H +R + +L I R L Y
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
IH HRDIK N+LLD K+ DFG AK + + GE V+ + + Y A
Sbjct: 143 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSYICSRY-YRA 195
Query: 523 PEYL---TDGLATAKSDVYAFGVVLFEIISGK 551
PE + TD T+ DV++ G VL E++ G+
Sbjct: 196 PELIFGATD--YTSSIDVWSAGCVLAELLLGQ 225
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 24/211 (11%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL-- 408
++D+ ++G+G++G VY + + VAIK++ K + E++I+ K+ H N+V L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-NRELQIMRKLDHCNIVRLRY 80
Query: 409 IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
Y++ E DE++L + +Y + H +R + +L I R L YI
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H HRDIK N+LLD K+ DFG AK + + GE V+ + + Y AP
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSXICSRY-YRAP 191
Query: 524 EYL---TDGLATAKSDVYAFGVVLFEIISGK 551
E + TD T+ DV++ G VL E++ G+
Sbjct: 192 ELIFGATD--YTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 24/211 (11%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL-- 408
++D+ ++G+G++G VY + + VAIK++ K + E++I+ K+ H N+V L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-NRELQIMRKLDHCNIVRLRY 80
Query: 409 IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
Y++ E DE++L + +Y + + H +R + +L I R L YI
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H HRDIK N+LLD K+ DFG AK + + GE V+ + + Y AP
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSYICSRY-YRAP 191
Query: 524 EYL---TDGLATAKSDVYAFGVVLFEIISGK 551
E + TD T+ DV++ G VL E++ G+
Sbjct: 192 ELIFGATD--YTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
+H LV L TE LF + EY G L H+ Q + + +I+L
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISL----A 165
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGY 520
L Y+HE ++RD+K N+LLDS K++D+G+ K + D T + GT Y
Sbjct: 166 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSTFCGTPNY 219
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+APE L D +A GV++FE+++G+
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKT----KEFMAEMKILCKVHHSNLVELIGYA 412
LG G G V + + VA+K + + + E+ I ++H N+V+ G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 413 ATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
+ +L EY G L + P+ Q +M G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---------GVVYLHGIG 124
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
TH RDIK N+LLD KISDFGLA V + ++ E + K+ GT Y+APE L
Sbjct: 125 ITH---RDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 529 GLATAKS-DVYAFGVVLFEIISGK 551
A+ DV++ G+VL +++G+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 22/196 (11%)
Query: 359 LGHGTYGSVY--YGNIRNQEVAIK----RMTATKTKEFMAEMKI--LCKVHHSNLVELIG 410
LG G++G V Y Q+VA+K ++ A + E +I L + H ++++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 411 YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
++DE+ ++ EYA + + Q + + ++ A+ EY H H
Sbjct: 81 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV------EYCHRHK-- 132
Query: 471 HYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGL 530
VHRD+K N+LLD KI+DFGL+ ++ +DG T G+ Y APE ++ L
Sbjct: 133 -IVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKTS-CGSPNYAAPEVISGKL 187
Query: 531 -ATAKSDVYAFGVVLF 545
A + DV++ GV+L+
Sbjct: 188 YAGPEVDVWSCGVILY 203
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 26/212 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFM-AEMKILCKVHHSNLVEL- 408
++D+ ++G+G++G VY + + VAIK++ + K F E++I+ K+ H N+V L
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMRKLDHCNIVRLR 158
Query: 409 -IGYAATE--DELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
Y++ E DE++L + +Y + + H +R + +L I R L Y
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
IH HRDIK N+LLD K+ DFG AK + + GE V+ + + Y A
Sbjct: 217 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSYICSRY-YRA 269
Query: 523 PEYL---TDGLATAKSDVYAFGVVLFEIISGK 551
PE + TD T+ DV++ G VL E++ G+
Sbjct: 270 PELIFGATD--YTSSIDVWSAGCVLAELLLGQ 299
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
+H LV L TE LF + EY G L H+ Q + + +I+L
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISL----A 122
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGY 520
L Y+HE ++RD+K N+LLDS K++D+G+ K + D T + GT Y
Sbjct: 123 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNY 176
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+APE L D +A GV++FE+++G+
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
+H LV L TE LF + EY G L H+ Q + + +I+L
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISL----A 118
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGY 520
L Y+HE ++RD+K N+LLDS K++D+G+ K + D T + GT Y
Sbjct: 119 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNY 172
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+APE L D +A GV++FE+++G+
Sbjct: 173 IAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 30/205 (14%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIK-----RMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G + V + +EVA+K ++ ++ ++ E++I+ ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTH 471
TE L+L+ EYA G + +L + R ++ ++Y H+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQ---KF 133
Query: 472 YVHRDIKSSNILLDSAFRAKISDFGLAK--LVGKTSDGEATVTKVVGTFGYLAPEYLT-- 527
VHRD+K+ N+LLD+ KI+DFG + G D G Y APE
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA------FCGAPPYAAPELFQGK 187
Query: 528 --DGLATAKSDVYAFGVVLFEIISG 550
DG + DV++ GV+L+ ++SG
Sbjct: 188 KYDG---PEVDVWSLGVILYTLVSG 209
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFM-AEMKILCKVHHSNLVEL- 408
++D+ ++G+G++G VY + + VAIK++ + K F E++I+ K+ H N+V L
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL--QDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 409 -IGYAATEDE----LFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
Y++ E + L L+ +Y + + H +R + +L I R L Y
Sbjct: 80 YFFYSSGEKKDVVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
IH HRDIK N+LLD K+ DFG AK + + GE V+ + + Y A
Sbjct: 138 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSXICSRY-YRA 190
Query: 523 PEYL---TDGLATAKSDVYAFGVVLFEIISGK 551
PE + TD T+ DV++ G VL E++ G+
Sbjct: 191 PELIFGATD--YTSSIDVWSAGCVLAELLLGQ 220
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 26/206 (12%)
Query: 352 GFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
GF+ + V+ G I + + +K + ++ E+ I + H ++V G+
Sbjct: 27 GFAKCFEISDADTKEVFAGKIVPKSLLLK---PHQREKMSMEISIHRSLAHQHVVGFHGF 83
Query: 412 AATEDELFLIYEYAQKGSL------KSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
D +F++ E ++ SL + L +P+ R + +R QI L G +Y+H
Sbjct: 84 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR------YYLR-QIVL----GCQYLH 132
Query: 466 EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEY 525
+ +HRD+K N+ L+ KI DFGLA V DGE + GT Y+APE
Sbjct: 133 ---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKV-LCGTPNYIAPEV 186
Query: 526 LTDGLATAKSDVYAFGVVLFEIISGK 551
L+ + + DV++ G +++ ++ GK
Sbjct: 187 LSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 30/205 (14%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIK-----RMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G + V + +EVA++ ++ ++ ++ E++I+ ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTH 471
TE L+L+ EYA G + +L + R ++ ++Y H+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQ---KF 133
Query: 472 YVHRDIKSSNILLDSAFRAKISDFGLAK--LVGKTSDGEATVTKVVGTFGYLAPEYLT-- 527
VHRD+K+ N+LLD+ KI+DFG + G D + G+ Y APE
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD------EFCGSPPYAAPELFQGK 187
Query: 528 --DGLATAKSDVYAFGVVLFEIISG 550
DG + DV++ GV+L+ ++SG
Sbjct: 188 KYDG---PEVDVWSLGVILYTLVSG 209
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 352 GFSDSSLLGHGTYGSVYYGN-IRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIG 410
+++ ++G+G++G V+ + + EVAIK++ K + E++I+ V H N+V+L
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFK-NRELQIMRIVKHPNVVDLKA 99
Query: 411 Y----AATEDELFL--IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
+ +DE+FL + EY + ++ H + + + I L R L YI
Sbjct: 100 FFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQL--LRSLAYI 157
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRA-KISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
H HRDIK N+LLD K+ DFG AK++ GE V+ + + Y AP
Sbjct: 158 HS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL---IAGEPNVSXICSRY-YRAP 210
Query: 524 EYLTDGLA-TAKSDVYAFGVVLFEIISGK 551
E + T D+++ G V+ E++ G+
Sbjct: 211 ELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 26/215 (12%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRN-----------QEVAIKRMTATKTKEFMAEMKI 396
+ F +LG G++G V ++ ++V ++ T M E +I
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECT---MTEKRI 76
Query: 397 LCKV-HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIAL 455
L +H L +L T D LF + E+ G L H+ + + + A
Sbjct: 77 LSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFY-----AA 131
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
+ L ++H+ ++RD+K N+LLD K++DFG+ K +G T T
Sbjct: 132 EIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTAT-FC 185
Query: 516 GTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
GT Y+APE L + L D +A GV+L+E++ G
Sbjct: 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 358 LLGHGTYGSVYYGNIRNQE--VAIKRMTATKTKE------FMAEMKILCKVHHSN-LVEL 408
+LG G++G V + + E AIK + + M E ++L + L +L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
T D L+ + EY G L H+ Q G+ V A + + GL ++H
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHI---QQVGK--FKEPQAVFYAAEISIGLFFLH--- 137
Query: 469 KTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
K ++RD+K N++LDS KI+DFG+ K DG T + GT Y+APE +
Sbjct: 138 KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDG-VTTREFCGTPDYIAPEIIAY 194
Query: 529 GLATAKSDVYAFGVVLFEIISGK 551
D +A+GV+L+E+++G+
Sbjct: 195 QPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 18/205 (8%)
Query: 353 FSDSSLLGHGTYGSVYYGNIRNQEVAIKR------MTATKTKEFMAEMKILCKVHHSNLV 406
F S LG G G V+ + + + + R + + + E+++L + + +V
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 407 ELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHE 466
G ++ E+ + E+ GSL L + G+ + +V IA+ +GL Y+ E
Sbjct: 71 GFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLRE 125
Query: 467 HTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL 526
K +HRD+K SNIL++S K+ DFG++ G+ D A + VGT Y++PE L
Sbjct: 126 KHKI--MHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDEMA--NEFVGTRSYMSPERL 178
Query: 527 TDGLATAKSDVYAFGVVLFEIISGK 551
+ +SD+++ G+ L E+ G+
Sbjct: 179 QGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 120/295 (40%), Gaps = 54/295 (18%)
Query: 352 GFSDSSLLGHGTYGSVYYGN--IRNQEVAIKR------MTATKTKEFMAEMKILCKVHHS 403
F +G G + VY + VA+K+ M A + + E+ +L +++H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLK---SHLHDPQNRGQTSLSWIMRVQIALDAARG 460
N+++ ++EL ++ E A G L H + W VQ+
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC----SA 148
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGY 520
LE++H +HRDIK +N+ + + K+ D GL + S +VGT Y
Sbjct: 149 LEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF---SSKTTAAHSLVGTPYY 202
Query: 521 LAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRN 580
++PE + + KSD+++ G +L+E +AAL+
Sbjct: 203 MSPERIHENGYNFKSDIWSLGCLLYE----------------------------MAALQ- 233
Query: 581 SP---DSMSMSSLKDYIDPNMMDLYPHDCLF-KMAMLAKQCVDEDPILRPDMKQV 631
SP D M++ SL I+ P D ++ L C++ DP RPD+ V
Sbjct: 234 SPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 104/238 (43%), Gaps = 34/238 (14%)
Query: 326 KALGTDVFDMEKPVVFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIK----- 380
KA T +F E + F EI L+G G +G VY+G EVAI+
Sbjct: 17 KASQTSIFLQEWDIPFEQLEI---------GELIGKGRFGQVYHGRWHG-EVAIRLIDIE 66
Query: 381 RMTATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNR 440
R + K F E+ + H N+V +G + L +I + +L S + D
Sbjct: 67 RDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD---- 122
Query: 441 GQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKL 500
+ L QIA + +G+ Y+H +H+D+KS N+ D+ + I+DFGL +
Sbjct: 123 AKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDNG-KVVITDFGLFSI 178
Query: 501 VGKTSDG--EATVTKVVGTFGYLAPEYL--------TDGLATAK-SDVYAFGVVLFEI 547
G G E + G +LAPE + D L +K SDV+A G + +E+
Sbjct: 179 SGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 38/268 (14%)
Query: 351 EGFSDSSLLGHGTYGSVYY---------GNIRNQEVAIKRMT----ATKTKEFMAEMKIL 397
E F +LG G YG V+ G + +V +K+ T A T+ E ++L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKV-LKKATIVQKAKTTEHTRTERQVL 112
Query: 398 CKVHHSNLVELIGYA-ATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIAL- 455
+ S + + YA TE +L LI +Y G L +HL + + VQI +
Sbjct: 113 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE------VQIYVG 166
Query: 456 DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVV 515
+ LE++H K ++RDIK NILLDS ++DFGL+K +D
Sbjct: 167 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF--VADETERAYDFC 221
Query: 516 GTFGYLAPEYLTDGLATAKS--DVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASF 573
GT Y+AP+ + G + D ++ GV+++E+++G + + E+ S A
Sbjct: 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF-------TVDGEKNSQAEI 274
Query: 574 MLAALRNSPD-SMSMSSL-KDYIDPNMM 599
L++ P MS+L KD I +M
Sbjct: 275 SRRILKSEPPYPQEMSALAKDLIQRLLM 302
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 23/190 (12%)
Query: 372 IRNQEVAIKRMTATKTKEFMA----EMKILCKVH-HSNLVELIGYAATEDELFLIYEYAQ 426
++ EV +R++ + +E E IL +V H +++ LI + +FL+++ +
Sbjct: 124 VKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMR 183
Query: 427 KGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDS 486
KG L +L + + IMR + + ++H + VHRD+K NILLD
Sbjct: 184 KGELFDYLTEKVALSEKETRSIMRSLLE-----AVSFLH---ANNIVHRDLKPENILLDD 235
Query: 487 AFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATA------KSDVYAF 540
+ ++SDFG + GE + ++ GT GYLAPE L + + D++A
Sbjct: 236 NMQIRLSDFGFS---CHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWAC 291
Query: 541 GVVLFEIISG 550
GV+LF +++G
Sbjct: 292 GVILFTLLAG 301
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 107/246 (43%), Gaps = 30/246 (12%)
Query: 353 FSDSSLLGHGTYGSVY------YGNIRNQEVAIKRMTATKTKEFMA--EMKILCKVHHSN 404
FS ++G G +G VY G + + K+ K E +A E +L V +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 405 --LVELIGYA-ATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
+ + YA T D+L I + G L HL + + + A + GL
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY-----AAEIILGL 305
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
E++H V+RD+K +NILLD +ISD GLA K + VGT GY+
Sbjct: 306 EHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYM 357
Query: 522 APEYLTDGLA-TAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRN 580
APE L G+A + +D ++ G +LF+++ G + K +++ + L
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ-----HKTKDKHEIDRMTLTMAVE 412
Query: 581 SPDSMS 586
PDS S
Sbjct: 413 LPDSFS 418
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 107/246 (43%), Gaps = 30/246 (12%)
Query: 353 FSDSSLLGHGTYGSVY------YGNIRNQEVAIKRMTATKTKEFMA--EMKILCKVHHSN 404
FS ++G G +G VY G + + K+ K E +A E +L V +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 405 --LVELIGYA-ATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
+ + YA T D+L I + G L HL + + + A + GL
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY-----AAEIILGL 305
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
E++H V+RD+K +NILLD +ISD GLA K + VGT GY+
Sbjct: 306 EHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYM 357
Query: 522 APEYLTDGLA-TAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRN 580
APE L G+A + +D ++ G +LF+++ G + K +++ + L
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ-----HKTKDKHEIDRMTLTMAVE 412
Query: 581 SPDSMS 586
PDS S
Sbjct: 413 LPDSFS 418
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 35/225 (15%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGN--------------IRNQEVAIKRMTATKTKEFMAE 393
AT + + +G G YG+VY + N + + +E +A
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVRE-VAL 64
Query: 394 MKILCKVHHSNLVELIGYAAT-----EDELFLIYEYAQKGSLKSHLHD--PQNRGQTSLS 446
++ L H N+V L+ AT E ++ L++E+ + L+++L P ++
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK 123
Query: 447 WIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD 506
+MR + RGL+++H + VHRD+K NIL+ S K++DFGLA++
Sbjct: 124 DLMRQFL-----RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY--- 172
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+ +T VV T Y APE L D+++ G + E+ K
Sbjct: 173 -QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 38/209 (18%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIK-----RMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G + V + +EVA+K ++ ++ ++ E++I ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 412 AATEDELFLIYEYAQKGS----LKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEH 467
TE L+L+ EYA G L +H + + I+ ++Y H+
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS---------AVQYCHQ- 131
Query: 468 TKTHYVHRDIKSSNILLDSAFRAKISDFGLAK--LVGKTSDGEATVTKVVGTFGYLAPEY 525
VHRD+K+ N+LLD+ KI+DFG + G D G Y APE
Sbjct: 132 --KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA------FCGAPPYAAPEL 183
Query: 526 LT----DGLATAKSDVYAFGVVLFEIISG 550
DG + DV++ GV+L+ ++SG
Sbjct: 184 FQGKKYDG---PEVDVWSLGVILYTLVSG 209
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 110/236 (46%), Gaps = 23/236 (9%)
Query: 345 EILFATEGFSDSSLLGHGTYGSVYYGNIRNQEV----AIKRMTATK-TKEFMAEMKILCK 399
E LF EG +G GTYG VY ++ + A+K++ T + E+ +L +
Sbjct: 19 EDLFEYEGCK----VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRE 74
Query: 400 VHHSNLVEL--IGYAATEDELFLIYEYAQKG---SLKSHLHDPQNRGQTSLSWIMRVQIA 454
+ H N++ L + + + +++L+++YA+ +K H N+ L M +
Sbjct: 75 LKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLL 134
Query: 455 LDAARGLEYIHEHTKTHYVHRDIKSSNILL----DSAFRAKISDFGLAKLVGKTSDGEAT 510
G+ Y+H + +HRD+K +NIL+ R KI+D G A+L A
Sbjct: 135 YQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 191
Query: 511 VTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGKEAI-IRTEGMVSKN 564
+ VV TF Y APE L K+ D++A G + E+++ + R E + + N
Sbjct: 192 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN 247
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 22/202 (10%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIKRMTATKTKEFMAEMKI------LCKVHHSNLVELIG 410
LG G++G V Q+VA+K ++ K+ M++ L + H ++++L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 411 YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
T ++ ++ EYA G L ++ + + + + I +EY H H
Sbjct: 77 VITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIIC-----AIEYCHRHK-- 128
Query: 471 HYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGL 530
VHRD+K N+LLD KI+DFGL+ ++ +DG T G+ Y APE + L
Sbjct: 129 -IVHRDLKPENLLLDDNLNVKIADFGLSNIM---TDGNFLKTS-CGSPNYAAPEVINGKL 183
Query: 531 -ATAKSDVYAFGVVLFEIISGK 551
A + DV++ G+VL+ ++ G+
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 122/287 (42%), Gaps = 37/287 (12%)
Query: 353 FSDSSLLGHGTYGSVY------YGNIRNQEVAIKRMTATKTKEFMA--EMKILCKVHHSN 404
FS ++G G +G VY G + + K+ K E +A E +L V +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 405 --LVELIGYA-ATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
+ + YA T D+L I + G L HL + + + A + GL
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY-----AAEIILGL 305
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
E++H V+RD+K +NILLD +ISD GLA K + VGT GY+
Sbjct: 306 EHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYM 357
Query: 522 APEYLTDGLA-TAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRN 580
APE L G+A + +D ++ G +LF+++ G + K +++ + L
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ-----HKTKDKHEIDRMTLTMAVE 412
Query: 581 SPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAK--QCVDEDPILR 625
PDS S L+ ++ L D ++ L + Q V E P R
Sbjct: 413 LPDSFS-PELRSLLE----GLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 122/287 (42%), Gaps = 37/287 (12%)
Query: 353 FSDSSLLGHGTYGSVY------YGNIRNQEVAIKRMTATKTKEFMA--EMKILCKVHHSN 404
FS ++G G +G VY G + + K+ K E +A E +L V +
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 405 --LVELIGYA-ATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGL 461
+ + YA T D+L I + G L HL + + + A + GL
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY-----AAEIILGL 304
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
E++H V+RD+K +NILLD +ISD GLA K + VGT GY+
Sbjct: 305 EHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYM 356
Query: 522 APEYLTDGLA-TAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRN 580
APE L G+A + +D ++ G +LF+++ G + K +++ + L
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ-----HKTKDKHEIDRMTLTMAVE 411
Query: 581 SPDSMSMSSLKDYIDPNMMDLYPHDCLFKMAMLAK--QCVDEDPILR 625
PDS S L+ ++ L D ++ L + Q V E P R
Sbjct: 412 LPDSFS-PELRSLLE----GLLQRDVNRRLGCLGRGAQEVKESPFFR 453
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 352 GFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
F + L+ H + VY + ++ IKR + + F E I+ + +V+L Y
Sbjct: 81 AFGEVQLVRHKSTRKVYAMKLLSKFEMIKR---SDSAFFWEERDIMAFANSPWVVQLF-Y 136
Query: 412 AATEDE-LFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
A +D L+++ EY G L + + + + + + V +ALDA + +IH
Sbjct: 137 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH----- 191
Query: 471 HYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT--- 527
RD+K N+LLD + K++DFG + K +G VGT Y++PE L
Sbjct: 192 ----RDVKPDNMLLDKSGHLKLADFGTCMKMNK--EGMVRCDTAVGTPDYISPEVLKSQG 245
Query: 528 -DGLATAKSDVYAFGVVLFEIISG 550
DG + D ++ GV L+E++ G
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 352 GFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
F + L+ H + VY + ++ IKR + + F E I+ + +V+L Y
Sbjct: 86 AFGEVQLVRHKSTRKVYAMKLLSKFEMIKR---SDSAFFWEERDIMAFANSPWVVQLF-Y 141
Query: 412 AATEDE-LFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
A +D L+++ EY G L + + + + + + V +ALDA + +IH
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH----- 196
Query: 471 HYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT--- 527
RD+K N+LLD + K++DFG + K +G VGT Y++PE L
Sbjct: 197 ----RDVKPDNMLLDKSGHLKLADFGTCMKMNK--EGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 528 -DGLATAKSDVYAFGVVLFEIISG 550
DG + D ++ GV L+E++ G
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTKEFM--------AEMKIL 397
AT + + +G G YG+VY + VA+K + +E + A ++ L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 398 CKVHHSNLVELIGYAAT-----EDELFLIYEYAQKGSLKSHLHD--PQNRGQTSLSWIMR 450
H N+V L+ AT E ++ L++E+ + L+++L P ++ +MR
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMR 119
Query: 451 VQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEAT 510
+ RGL+++H + VHRD+K NIL+ S K++DFGLA++ +
Sbjct: 120 QFL-----RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY----QMA 167
Query: 511 VTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+ VV T Y APE L D+++ G + E+ K
Sbjct: 168 LAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 352 GFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
F + L+ H + VY + ++ IKR + + F E I+ + +V+L Y
Sbjct: 86 AFGEVQLVRHKSTRKVYAMKLLSKFEMIKR---SDSAFFWEERDIMAFANSPWVVQLF-Y 141
Query: 412 AATEDE-LFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
A +D L+++ EY G L + + + + + + V +ALDA + +IH
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH----- 196
Query: 471 HYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT--- 527
RD+K N+LLD + K++DFG + K +G VGT Y++PE L
Sbjct: 197 ----RDVKPDNMLLDKSGHLKLADFGTCMKMNK--EGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 528 -DGLATAKSDVYAFGVVLFEIISG 550
DG + D ++ GV L+E++ G
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 348 FATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTAT----KTKEFMAEMKILCKVH 401
F E D +G G YGSV Q +A+KR+ +T + K+ + ++ ++ +
Sbjct: 19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSS 78
Query: 402 HSN-LVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
+V+ G E + ++ E K + + I+ +I L +
Sbjct: 79 DCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILG-KITLATVKA 137
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGY 520
L ++ E+ K +HRDIK SNILLD + K+ DFG++ G+ D A T+ G Y
Sbjct: 138 LNHLKENLKI--IHRDIKPSNILLDRSGNIKLCDFGIS---GQLVDSIAK-TRDAGCRPY 191
Query: 521 LAPEYLTDGLAT----AKSDVYAFGVVLFEIISGK 551
+APE + + +SDV++ G+ L+E+ +G+
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 359 LGHGTYGSVYYGNIR--NQEVAIKRM-----TATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G+G YG V R Q+VAIK++ T K + E+KIL H N++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNII----- 117
Query: 412 AATEDELFLIYEYAQKGS-------LKSHLHDPQNRGQT-SLSWIMRVQIALDAARGLEY 463
A +D L Y + S ++S LH + Q +L + L RGL+Y
Sbjct: 118 -AIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQL--LRGLKY 174
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGYLA 522
+H +HRD+K SN+L++ KI DFG+A+ L ++ + +T+ V T Y A
Sbjct: 175 MH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 231
Query: 523 PEY-LTDGLATAKSDVYAFGVVLFEIISGKE 552
PE L+ T D+++ G + E+++ ++
Sbjct: 232 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 34/213 (15%)
Query: 359 LGHGTYGSVYYGNIRN--QEVAIKRMTATK----------------TKEFMAEMKILCKV 400
LG G YG V +N E AIK + ++ +E E+ +L +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 401 HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARG 460
H N+++L + +L+ E+ + G L + + + + IM+ ++ G
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILS-----G 158
Query: 461 LEYIHEHTKTHYVHRDIKSSNILLD---SAFRAKISDFGLAKLVGKTSDGEATVTKVVGT 517
+ Y+H+H + VHRDIK NILL+ S KI DFGL+ K + + +GT
Sbjct: 159 ICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK----DYKLRDRLGT 211
Query: 518 FGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
Y+APE L K DV++ GV+++ ++ G
Sbjct: 212 AYYIAPEVLKKKY-NEKCDVWSCGVIMYILLCG 243
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 34/218 (15%)
Query: 351 EGFSDS----SLLGHGTYGSVYY--GNIRNQEVAIKRM------TATKTKEFMAEMKILC 398
+G SD LG G YG V + E AIK + T + + + E+ +L
Sbjct: 17 QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 399 KVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ H N+++L + + +L+ E + G L + Q + + IM+ ++
Sbjct: 77 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---- 132
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFR---AKISDFGLA---KLVGKTSDGEATVT 512
G Y+H+H + VHRD+K N+LL+S R KI DFGL+ ++ GK +
Sbjct: 133 -GTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER----- 183
Query: 513 KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+GT Y+APE L K DV++ GV+L+ ++ G
Sbjct: 184 --LGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCG 218
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTKEFM--------AEMKIL 397
AT + + +G G YG+VY + VA+K + +E + A ++ L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 398 CKVHHSNLVELIGYAAT-----EDELFLIYEYAQKGSLKSHLHD--PQNRGQTSLSWIMR 450
H N+V L+ AT E ++ L++E+ + L+++L P ++ +MR
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMR 119
Query: 451 VQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEAT 510
+ RGL+++H + VHRD+K NIL+ S K++DFGLA++ +
Sbjct: 120 QFL-----RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY----QMA 167
Query: 511 VTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+ VV T Y APE L D+++ G + E+ K
Sbjct: 168 LDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 374 NQEVAIK----RMTATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGS 429
NQ A+K RM A KE A +K LC+ H N+V+L + FL+ E G
Sbjct: 36 NQAFAVKIISKRMEANTQKEITA-LK-LCE-GHPNIVKLHEVFHDQLHTFLVMELLNGGE 92
Query: 430 LKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILL---DS 486
L + ++ +T S+IMR ++ + ++H+ VHRD+K N+L +
Sbjct: 93 LFERIKKKKHFSETEASYIMRKLVS-----AVSHMHD---VGVVHRDLKPENLLFTDEND 144
Query: 487 AFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFE 546
KI DFG A+L K D + T T Y APE L D+++ GV+L+
Sbjct: 145 NLEIKIIDFGFARL--KPPDNQPLKTPCF-TLHYAAPELLNQNGYDESCDLWSLGVILYT 201
Query: 547 IISGK 551
++SG+
Sbjct: 202 MLSGQ 206
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EYA G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+++D K++DFGLAK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 107/264 (40%), Gaps = 35/264 (13%)
Query: 330 TDVFDMEKPVVFTYDEILFATEGFSDSSLLGHGTY-----------GSVYYGNIRNQEVA 378
D +P+V E+ + F ++G G + G VY I N+
Sbjct: 40 ADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDM 99
Query: 379 IKRMTATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQ 438
+KR + +E E +L + +L E+ L+L+ EY G L + L
Sbjct: 100 LKRGEVSCFRE---ERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFG 156
Query: 439 NRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLA 498
R ++ +I + ++ +H + YVHRDIK NILLD +++DFG
Sbjct: 157 ERIPAEMARFYLAEIVM----AIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFG-- 207
Query: 499 KLVGKTSDGEATVTKVVGTFGYLAPEYLT-------DGLATAKSDVYAFGVVLFEIISGK 551
+ +DG VGT YL+PE L G + D +A GV +E+ G+
Sbjct: 208 SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
Query: 552 -----EAIIRTEGMVSKNQERRSL 570
++ T G + +E SL
Sbjct: 268 TPFYADSTAETYGKIVHYKEHLSL 291
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 19/167 (11%)
Query: 391 MAEMKILCKVH-HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIM 449
+ E+ IL KV H N+++L T FL+++ +KG L +L + + IM
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 117
Query: 450 RVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEA 509
R AL LE I K + VHRD+K NILLD K++DFG + + GE
Sbjct: 118 R---AL-----LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEK 166
Query: 510 TVTKVVGTFGYLAPEYLTDGLAT------AKSDVYAFGVVLFEIISG 550
+ +V GT YLAPE + + + D+++ GV+++ +++G
Sbjct: 167 -LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 30/220 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTKEFM--------AEMKILC 398
AT + + +G G YG+VY + VA+K + +E + A ++ L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 399 KVHHSNLVELIGYAAT-----EDELFLIYEYAQKGSLKSHLHD--PQNRGQTSLSWIMRV 451
H N+V L+ AT E ++ L++E+ + L+++L P ++ +MR
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 452 QIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATV 511
+ RGL+++H + VHRD+K NIL+ S K++DFGLA++ + +
Sbjct: 121 FL-----RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY----QMAL 168
Query: 512 TKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
VV T Y APE L D+++ G + E+ K
Sbjct: 169 FPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 30/206 (14%)
Query: 359 LGHGTYGSVYY--GNIRNQEVAIKRM------TATKTKEFMAEMKILCKVHHSNLVELIG 410
LG G YG V + E AIK + T + + + E+ +L ++ H N+++L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 411 YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
+ + +L+ E + G L + Q + + IM+ ++ G Y+H+H
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS-----GTTYLHKH--- 123
Query: 471 HYVHRDIKSSNILLDSAFR---AKISDFGLA---KLVGKTSDGEATVTKVVGTFGYLAPE 524
+ VHRD+K N+LL+S R KI DFGL+ ++ GK + + +GT Y+APE
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK-------MKERLGTAYYIAPE 176
Query: 525 YLTDGLATAKSDVYAFGVVLFEIISG 550
L K DV++ GV+L+ ++ G
Sbjct: 177 VLRKKY-DEKCDVWSCGVILYILLCG 201
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 359 LGHGTYGSVYYGNIR--NQEVAIKRM-----TATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G+G YG V R Q+VAIK++ T K + E+KIL H N++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNII----- 116
Query: 412 AATEDELFLIYEYAQKGS-------LKSHLHDPQNRGQT-SLSWIMRVQIALDAARGLEY 463
A +D L Y + S ++S LH + Q +L + L RGL+Y
Sbjct: 117 -AIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQL--LRGLKY 173
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK-LVGKTSDGEATVTKVVGTFGYLA 522
+H +HRD+K SN+L++ KI DFG+A+ L ++ + +T+ V T Y A
Sbjct: 174 MH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 230
Query: 523 PEY-LTDGLATAKSDVYAFGVVLFEIISGKE 552
PE L+ T D+++ G + E+++ ++
Sbjct: 231 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 107
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EYA G + SHL +P R QI L E
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 156
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+++D K++DFG AK V + + GT YLA
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV------KGRTWXLCGTPEYLA 207
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 30/215 (13%)
Query: 356 SSLLGHGTY----GSVYYGNIRNQEVAIKRMTATKTK-EFMAEMKILCKVH-HSNLVELI 409
S LLG G Y G+V N + V I A ++ E++ L + + N++ELI
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 410 GYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTK 469
+ + +L++E Q GS+ +H+ ++ + S ++R D A L+++ HTK
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVR-----DVAAALDFL--HTK 130
Query: 470 THYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSDGEAT------VTKVVGTFGY 520
HRD+K NIL +S + KI DF L G + T +T G+ Y
Sbjct: 131 G-IAHRDLKPENILCESPEKVSPVKICDFDLGS--GMKLNNSCTPITTPELTTPCGSAEY 187
Query: 521 LAPEYL---TDG--LATAKSDVYAFGVVLFEIISG 550
+APE + TD + D+++ GVVL+ ++SG
Sbjct: 188 MAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 25/199 (12%)
Query: 362 GTYGSVYYGNIRNQEV-AIKRMTATKTKE----FMAEMKILCKVHHSNLVELIGYAATED 416
G +G VY + V A ++ TK++E +M E+ IL H N+V+L+ E+
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 417 ELFLIYEYAQKGSLKS---HLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
L+++ E+ G++ + L P Q + + LDA L Y+H++ +
Sbjct: 81 NLWILIEFCAGGAVDAVMLELERPLTESQIQVV----CKQTLDA---LNYLHDNK---II 130
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL-----TD 528
HRD+K+ NIL K++DFG++ +T +GT ++APE + D
Sbjct: 131 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRR--DSFIGTPYWMAPEVVMCETSKD 188
Query: 529 GLATAKSDVYAFGVVLFEI 547
K+DV++ G+ L E+
Sbjct: 189 RPYDYKADVWSLGITLIEM 207
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 19/167 (11%)
Query: 391 MAEMKILCKVH-HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIM 449
+ E+ IL KV H N+++L T FL+++ +KG L +L + + IM
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 450 RVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEA 509
R AL LE I K + VHRD+K NILLD K++DFG + + D
Sbjct: 131 R---AL-----LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL----DPGE 178
Query: 510 TVTKVVGTFGYLAPEYLTDGLAT------AKSDVYAFGVVLFEIISG 550
+ +V GT YLAPE + + + D+++ GV+++ +++G
Sbjct: 179 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EYA G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+++D K++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EYA G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+++D K++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 359 LGHGTYGSVYYGNIRN--QEVAIKRMTATKTKE----FMAEMKILCKVHHSN-LVELIGY 411
+G GT G V+ R +A+K+M + KE + ++ ++ K H +V+ G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTH 471
T ++F+ E G+ L + R Q + + ++ + + L Y+ E K
Sbjct: 93 FITNTDVFIAMELM--GTCAEKL---KKRMQGPIPERILGKMTVAIVKALYYLKE--KHG 145
Query: 472 YVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLA 531
+HRD+K SNILLD + K+ DFG++ G+ D +A + G Y+APE +
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGIS---GRLVDDKAK-DRSAGCAAYMAPERIDPPDP 201
Query: 532 TA-----KSDVYAFGVVLFEIISGK 551
T ++DV++ G+ L E+ +G+
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQ 226
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Query: 391 MAEMKILCKVH-HSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIM 449
+ E+ IL KV H N+++L T FL+++ +KG L +L + + IM
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 450 RVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEA 509
R AL LE I K + VHRD+K NILLD K++DFG + + D
Sbjct: 131 R---AL-----LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL----DPGE 178
Query: 510 TVTKVVGTFGYLAPEYLTDGLAT------AKSDVYAFGVVLFEIISG 550
+ V GT YLAPE + + + D+++ GV+++ +++G
Sbjct: 179 KLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EYA G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+++D +++DFGLAK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
Query: 374 NQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKS- 432
N +++IK +K +F E++I+ + + + G DE+++IYEY + S+
Sbjct: 78 NDKISIK----SKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF 133
Query: 433 -HLHDPQNRGQTSLSWIMRVQIALDAA-RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRA 490
++ T I ++ + + YIH + + HRD+K SNIL+D R
Sbjct: 134 DEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRV 191
Query: 491 KISDFGLAK-LVGKTSDGEATVTKVVGTFGYLAPEYLTD--GLATAKSDVYAFGVVLF 545
K+SDFG ++ +V K G GT+ ++ PE+ ++ AK D+++ G+ L+
Sbjct: 192 KLSDFGESEYMVDKKIKGSR------GTYEFMPPEFFSNESSYNGAKVDIWSLGICLY 243
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 366 SVYYGNIRNQEVAIKRMTATKTKEFMA-EMKILCKVHHSNLVELIGYAATEDELFLIYEY 424
V+ G + + + +K KE M+ E+ I + + ++V G+ +D ++++ E
Sbjct: 68 EVFAGKVVPKSMLLK----PHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI 123
Query: 425 AQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILL 484
++ SL + + + MR I +G++Y+H + +HRD+K N+ L
Sbjct: 124 CRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN---RVIHRDLKLGNLFL 175
Query: 485 DSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVL 544
+ KI DFGLA + DGE T + GT Y+APE L + + D+++ G +L
Sbjct: 176 NDDMDVKIGDFGLATKI--EFDGERKKT-LCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
Query: 545 FEIISGK 551
+ ++ GK
Sbjct: 233 YTLLVGK 239
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 34/189 (17%)
Query: 359 LGHGTYGSVYYGNIRN--QEVAIKRMTATKTKE-----FMAEMKILCKVHHSNLVELIG- 410
+G GT+G V+ R Q+VA+K++ KE + E+KIL + H N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 411 -------YAATEDELFLIYEYAQK---GSLKSHLHDPQNRGQTSLSWIMRV-QIALDAAR 459
Y + ++L++++ + G L + L + +LS I RV Q+ L+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLN--- 136
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKL--VGKTSDGEATVTKVVGT 517
GL YIH + +HRD+K++N+L+ K++DFGLA+ + K S +VV T
Sbjct: 137 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 192
Query: 518 FGYLAPEYL 526
Y PE L
Sbjct: 193 LWYRPPELL 201
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 34/189 (17%)
Query: 359 LGHGTYGSVYYGNIRN--QEVAIKRMTATKTKE-----FMAEMKILCKVHHSNLVELIG- 410
+G GT+G V+ R Q+VA+K++ KE + E+KIL + H N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 411 -------YAATEDELFLIYEYAQK---GSLKSHLHDPQNRGQTSLSWIMRV-QIALDAAR 459
Y + ++L++++ + G L + L + +LS I RV Q+ L+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLN--- 136
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKL--VGKTSDGEATVTKVVGT 517
GL YIH + +HRD+K++N+L+ K++DFGLA+ + K S +VV T
Sbjct: 137 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 192
Query: 518 FGYLAPEYL 526
Y PE L
Sbjct: 193 LWYRPPELL 201
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 34/189 (17%)
Query: 359 LGHGTYGSVYYGNIRN--QEVAIKRMTATKTKE-----FMAEMKILCKVHHSNLVELIG- 410
+G GT+G V+ R Q+VA+K++ KE + E+KIL + H N+V LI
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 411 -------YAATEDELFLIYEYAQK---GSLKSHLHDPQNRGQTSLSWIMRV-QIALDAAR 459
Y + ++L++++ + G L + L + +LS I RV Q+ L+
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLN--- 135
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKL--VGKTSDGEATVTKVVGT 517
GL YIH + +HRD+K++N+L+ K++DFGLA+ + K S +VV T
Sbjct: 136 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 191
Query: 518 FGYLAPEYL 526
Y PE L
Sbjct: 192 LWYRPPELL 200
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 34/189 (17%)
Query: 359 LGHGTYGSVYYGNIRN--QEVAIKRMTATKTKE-----FMAEMKILCKVHHSNLVELIG- 410
+G GT+G V+ R Q+VA+K++ KE + E+KIL + H N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 411 -------YAATEDELFLIYEYAQK---GSLKSHLHDPQNRGQTSLSWIMRV-QIALDAAR 459
Y + ++L++++ + G L + L + +LS I RV Q+ L+
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLN--- 136
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKL--VGKTSDGEATVTKVVGT 517
GL YIH + +HRD+K++N+L+ K++DFGLA+ + K S +VV T
Sbjct: 137 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 192
Query: 518 FGYLAPEYL 526
Y PE L
Sbjct: 193 LWYRPPELL 201
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 47/223 (21%)
Query: 353 FSDSSLLGHGTYGSVYYGNIR--NQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
F SLLG G YG V + + VAIK++ F + E+KIL H N++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 407 ELIGYAATE-----DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD----- 456
+ + +E+++I E Q T L ++ Q+ D
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQ----------------TDLHRVISTQMLSDDHIQY 116
Query: 457 ----AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTS--DGEAT 510
R ++ +H ++ +HRD+K SN+L++S K+ DFGLA+++ +++ + E T
Sbjct: 117 FIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 511 -----VTKVVGTFGYLAPE-YLTDGLATAKSDVYAFGVVLFEI 547
+T+ V T Y APE LT + DV++ G +L E+
Sbjct: 174 GQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D K++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 103/201 (51%), Gaps = 24/201 (11%)
Query: 359 LGHGTYGSVYYGNIRNQE---VAIKRMTATKTKE----FMAEMKILCKVHHSNLVELIGY 411
LG G +G VY +N+E +A ++ TK++E ++ E++IL H +V+L+G
Sbjct: 19 LGDGAFGKVYKA--KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 76
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTH 471
+ +L+++ E+ G++ + + + +RG T QI + + LE ++
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTE------PQIQVVCRQMLEALNFLHSKR 129
Query: 472 YVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEY-----L 526
+HRD+K+ N+L+ +++DFG++ KT + +GT ++APE +
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS---FIGTPYWMAPEVVMCETM 186
Query: 527 TDGLATAKSDVYAFGVVLFEI 547
D K+D+++ G+ L E+
Sbjct: 187 KDTPYDYKADIWSLGITLIEM 207
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +I V+ LV+L
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT---LNEKRIQQAVNFPFLVKL 107
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EYA G + SHL +P R QI L E
Sbjct: 108 EFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 156
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D K++DFG AK V + + GT YLA
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV------KGRTWXLCGTPEYLA 207
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D K++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 103/201 (51%), Gaps = 24/201 (11%)
Query: 359 LGHGTYGSVYYGNIRNQE---VAIKRMTATKTKE----FMAEMKILCKVHHSNLVELIGY 411
LG G +G VY +N+E +A ++ TK++E ++ E++IL H +V+L+G
Sbjct: 27 LGDGAFGKVYKA--KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 84
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTH 471
+ +L+++ E+ G++ + + + +RG T QI + + LE ++
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTE------PQIQVVCRQMLEALNFLHSKR 137
Query: 472 YVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEY-----L 526
+HRD+K+ N+L+ +++DFG++ KT + +GT ++APE +
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS---FIGTPYWMAPEVVMCETM 194
Query: 527 TDGLATAKSDVYAFGVVLFEI 547
D K+D+++ G+ L E+
Sbjct: 195 KDTPYDYKADIWSLGITLIEM 215
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 47/223 (21%)
Query: 353 FSDSSLLGHGTYGSVYYGNIR--NQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
F SLLG G YG V + + VAIK++ F + E+KIL H N++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 407 ELIGYAATE-----DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD----- 456
+ + +E+++I E Q T L ++ Q+ D
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQ----------------TDLHRVISTQMLSDDHIQY 116
Query: 457 ----AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTS--DGEAT 510
R ++ +H ++ +HRD+K SN+L++S K+ DFGLA+++ +++ + E T
Sbjct: 117 FIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 511 -----VTKVVGTFGYLAPE-YLTDGLATAKSDVYAFGVVLFEI 547
+T+ V T Y APE LT + DV++ G +L E+
Sbjct: 174 GQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 26/218 (11%)
Query: 343 YDEIL--------FATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEM 394
YDE+L T GF+ L H G + I ++ + KT E+
Sbjct: 5 YDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKT-----EI 59
Query: 395 KILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIA 454
+ L + H ++ +L T +++F++ EY G L ++ Q+R + ++ QI
Sbjct: 60 EALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYI-ISQDRLSEEETRVVFRQIV 118
Query: 455 LDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGL-AKLVGKTSDGEATVTK 513
A Y+H Y HRD+K N+L D + K+ DFGL AK G + + +
Sbjct: 119 SAVA----YVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG---NKDYHLQT 168
Query: 514 VVGTFGYLAPEYLT-DGLATAKSDVYAFGVVLFEIISG 550
G+ Y APE + +++DV++ G++L+ ++ G
Sbjct: 169 CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EYA G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+++D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D K++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 31/209 (14%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 43 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 99
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 148
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLV-GKTSDGEATVTKVVGTFGYL 521
Y+H ++RD+K N+L+D +++DFG AK V G+T + GT YL
Sbjct: 149 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYL 198
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISG 550
APE + D +A GV+++E+ +G
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLAGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 43 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 99
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHAR-------FYAAQIVLT----FE 148
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 149 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 199
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 71 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 127
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 176
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGATWTLCGTPEYLA 227
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 312 QTTGEVSNPPITIPKAL-------GTDVFDMEKPVVFTYDEILFATEGFSDSSL--LGHG 362
Q+ G+ NP + IPK T D++ + F + + LG G
Sbjct: 3 QSKGKKRNPGLKIPKEAFEQPQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIMELGRG 62
Query: 363 TYGSVYYGNIRN----QEVAIKRMTAT----KTKEFMAEMKILCK-VHHSNLVELIGYAA 413
YG V +R+ Q +A+KR+ AT + K + ++ I + V V G
Sbjct: 63 AYGVVE--KMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF 120
Query: 414 TEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYV 473
E ++++ E SL ++GQT I+ +IA+ + LE H H+K +
Sbjct: 121 REGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILG-KIAVSIVKALE--HLHSKLSVI 176
Query: 474 HRDIKSSNILLDSAFRAKISDFG----LAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDG 529
HRD+K SN+L+++ + K+ DFG L V KT D G Y+APE +
Sbjct: 177 HRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA--------GCKPYMAPERINPE 228
Query: 530 LA----TAKSDVYAFGVVLFEIISGKEAIIR 556
L + KSD+++ G+ + E+ AI+R
Sbjct: 229 LNQKGYSVKSDIWSLGITMIEL-----AILR 254
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 37 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 93
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 94 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 142
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 143 YLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 193
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 340 VFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCK 399
+F + E L T FS+ L G ++ + K+ K E+ +L K
Sbjct: 23 IFEFKETL-GTGAFSEVVLAEEKATGKLF-----AVKCIPKKALKGKESSIENEIAVLRK 76
Query: 400 VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR 459
+ H N+V L + + L+L+ + G L + + + S ++R LDA
Sbjct: 77 IKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ--VLDA-- 132
Query: 460 GLEYIHEHTKTHYVHRDIKSSNILL---DSAFRAKISDFGLAKLVGKTSDGEATVTKVVG 516
+ Y+H + VHRD+K N+L D + ISDFGL+K+ GK ++ G
Sbjct: 133 -VYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD----VMSTACG 184
Query: 517 TFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
T GY+APE L + D ++ GV+ + ++ G
Sbjct: 185 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 51 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 107
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 108 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 156
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 207
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 71 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 127
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHAR-------FYAAQIVLT----FE 176
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 227
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLXGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 71 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 127
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 128 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 176
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 227
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 107
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 156
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 207
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 107
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 156
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 207
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 102/226 (45%), Gaps = 38/226 (16%)
Query: 353 FSDSSLLGHGTYGSVYYGN--IRNQEVAIKRMTATKTK----EFMAEMKILCKVHHSNLV 406
F LG G +G V+ + + AIKR+ + + M E+K L K+ H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 407 ------------ELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMR---V 451
E + ++ + L++ + +K +LK ++ G+ ++ R +
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN-----GRCTIEERERSVCL 121
Query: 452 QIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATV 511
I L A +E++H +HRD+K SNI K+ DFGL + + + + +
Sbjct: 122 HIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 512 TKV---------VGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEII 548
T + VGT Y++PE + + K D+++ G++LFE++
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ L +L
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLTKL 107
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EYA G + SHL +P R QI L E
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 156
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+++D K++DFG AK V + + GT YLA
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV------KGRTWXLCGTPEYLA 207
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ L +L
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLTKL 107
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EYA G + SHL +P R QI L E
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHAR-------FYAAQIVLT----FE 156
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+++D K++DFG AK V + + GT YLA
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV------KGRTWXLCGTPEYLA 207
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ L +L
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLTKL 107
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EYA G + SHL +P R QI L E
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 156
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+++D K++DFG AK V + + GT YLA
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV------KGRTWXLCGTPEYLA 207
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 18/203 (8%)
Query: 352 GFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGY 411
F + L+ H VY + ++ IKR + + F E I+ + +V+L
Sbjct: 87 AFGEVQLVRHKASQKVYAMKLLSKFEMIKR---SDSAFFWEERDIMAFANSPWVVQLFCA 143
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTH 471
+ L+++ EY G L + + + + + + V +ALDA + IH
Sbjct: 144 FQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIH------ 197
Query: 472 YVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT---- 527
RD+K N+LLD K++DFG + +T G VGT Y++PE L
Sbjct: 198 ---RDVKPDNMLLDKHGHLKLADFGTCMKMDET--GMVHCDTAVGTPDYISPEVLKSQGG 252
Query: 528 DGLATAKSDVYAFGVVLFEIISG 550
DG + D ++ GV LFE++ G
Sbjct: 253 DGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 45 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 101
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 102 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHAR-------FYAAQIVLT----FE 150
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 151 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 201
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 107
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 156
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 207
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 90/186 (48%), Gaps = 14/186 (7%)
Query: 366 SVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYA 425
V+ G + + + +K + ++ E+ I + + ++V G+ +D ++++ E
Sbjct: 52 EVFAGKVVPKSMLLK---PHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEIC 108
Query: 426 QKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLD 485
++ SL + + + MR I +G++Y+H + +HRD+K N+ L+
Sbjct: 109 RRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN---RVIHRDLKLGNLFLN 160
Query: 486 SAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLF 545
KI DFGLA + DGE + GT Y+APE L + + D+++ G +L+
Sbjct: 161 DDMDVKIGDFGLATKI--EFDGERK-KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILY 217
Query: 546 EIISGK 551
++ GK
Sbjct: 218 TLLVGK 223
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 26/206 (12%)
Query: 358 LLGHGTYGSV-----------YYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSN-L 405
+LG G++G V Y I ++V I+ T M E ++L L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECT---MVEKRVLALPGKPPFL 404
Query: 406 VELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
+L T D L+ + EY G L H+ Q G+ V A + A GL ++
Sbjct: 405 TQLHSCFQTMDRLYFVMEYVNGGDLMYHI---QQVGR--FKEPHAVFYAAEIAIGLFFLQ 459
Query: 466 EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEY 525
++RD+K N++LDS KI+DFG+ K DG T GT Y+APE
Sbjct: 460 SKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDG-VTTKXFCGTPDYIAPEI 513
Query: 526 LTDGLATAKSDVYAFGVVLFEIISGK 551
+ D +AFGV+L+E+++G+
Sbjct: 514 IAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 107
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 156
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 207
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 366 SVYYGNIRNQEVAIKRMTATKTKEFMA-EMKILCKVHHSNLVELIGYAATEDELFLIYEY 424
V+ G + + + +K KE M+ E+ I + + ++V G+ +D ++++ E
Sbjct: 68 EVFAGKVVPKSMLLK----PHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI 123
Query: 425 AQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILL 484
++ SL + + + MR I +G++Y+H + +HRD+K N+ L
Sbjct: 124 CRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN---RVIHRDLKLGNLFL 175
Query: 485 DSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVL 544
+ KI DFGLA + DGE + GT Y+APE L + + D+++ G +L
Sbjct: 176 NDDMDVKIGDFGLATKI--EFDGERK-KXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
Query: 545 FEIISGK 551
+ ++ GK
Sbjct: 233 YTLLVGK 239
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 26/231 (11%)
Query: 332 VFDMEK-----PVVFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIR---NQEVAIKRMT 383
VFD+ K PV +D +L + + LG G +G V+ R N A MT
Sbjct: 136 VFDIWKQYYPQPVEIKHDHVL---DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT 192
Query: 384 ATKTKE--FMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRG 441
++ + E++ + + H LV L ++E+ +IYE+ G L + D N+
Sbjct: 193 PHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK- 251
Query: 442 QTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDS--AFRAKISDFGLAK 499
+S V+ +GL ++HE+ +YVH D+K NI+ + + K+ DFGL
Sbjct: 252 ---MSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTA 305
Query: 500 LVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ D + +V GT + APE +D+++ GV+ + ++SG
Sbjct: 306 HL----DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 366 SVYYGNIRNQEVAIKRMTATKTKEFMA-EMKILCKVHHSNLVELIGYAATEDELFLIYEY 424
V+ G + + + +K KE M+ E+ I + + ++V G+ +D ++++ E
Sbjct: 68 EVFAGKVVPKSMLLK----PHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI 123
Query: 425 AQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILL 484
++ SL + + + MR I +G++Y+H + +HRD+K N+ L
Sbjct: 124 CRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN---RVIHRDLKLGNLFL 175
Query: 485 DSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVL 544
+ KI DFGLA + DGE + GT Y+APE L + + D+++ G +L
Sbjct: 176 NDDMDVKIGDFGLATKI--EFDGERK-KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCIL 232
Query: 545 FEIISGK 551
+ ++ GK
Sbjct: 233 YTLLVGK 239
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 107
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHAR-------FYAAQIVLT----FE 156
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 207
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+++D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 36 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 92
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 93 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 141
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 142 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWTLCGTPEYLA 192
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 193 PEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 107
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 156
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWTLCGTPEYLA 207
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 31/209 (14%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLV-GKTSDGEATVTKVVGTFGYL 521
Y+H ++RD+K N+L+D +++DFG AK V G+T + GT YL
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-------WXLCGTPEYL 205
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISG 550
APE + D +A GV+++E+ +G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 26/206 (12%)
Query: 358 LLGHGTYGSV-----------YYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSN-L 405
+LG G++G V Y I ++V I+ T M E ++L L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECT---MVEKRVLALPGKPPFL 83
Query: 406 VELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
+L T D L+ + EY G L H+ Q G+ V A + A GL ++
Sbjct: 84 TQLHSCFQTMDRLYFVMEYVNGGDLMYHI---QQVGR--FKEPHAVFYAAEIAIGLFFLQ 138
Query: 466 EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEY 525
++RD+K N++LDS KI+DFG+ K DG T GT Y+APE
Sbjct: 139 SKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDG-VTTKXFCGTPDYIAPEI 192
Query: 526 LTDGLATAKSDVYAFGVVLFEIISGK 551
+ D +AFGV+L+E+++G+
Sbjct: 193 IAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 26/231 (11%)
Query: 332 VFDMEK-----PVVFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIR---NQEVAIKRMT 383
VFD+ K PV +D +L + + LG G +G V+ R N A MT
Sbjct: 30 VFDIWKQYYPQPVEIKHDHVL---DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT 86
Query: 384 ATKTKE--FMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRG 441
++ + E++ + + H LV L ++E+ +IYE+ G L + D N+
Sbjct: 87 PHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK- 145
Query: 442 QTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDS--AFRAKISDFGLAK 499
+S V+ +GL ++HE+ YVH D+K NI+ + + K+ DFGL
Sbjct: 146 ---MSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTA 199
Query: 500 LVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ D + +V GT + APE +D+++ GV+ + ++SG
Sbjct: 200 HL----DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 358 LLGHGTYGSVYYG-NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHSNLVELIGY 411
+LG G + V + R Q++ + A K E E+ +L K+ H N+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTH 471
+ L+LI + G L + + + S ++ Q+ LDA + Y+H+
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI-FQV-LDAVK---YLHD---LG 136
Query: 472 YVHRDIKSSNIL---LDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
VHRD+K N+L LD + ISDFGL+K+ D + ++ GT GY+APE L
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 529 GLATAKSDVYAFGVVLFEIISG 550
+ D ++ GV+ + ++ G
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG 214
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 47/223 (21%)
Query: 353 FSDSSLLGHGTYGSVYYGNIR--NQEVAIKRMTATKTKEF----MAEMKILCKVHHSNLV 406
F SLLG G YG V + + VAIK++ F + E+KIL H N++
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 407 ELIGYAATE-----DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD----- 456
+ + +E+++I E Q T L ++ Q+ D
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQ----------------TDLHRVISTQMLSDDHIQY 116
Query: 457 ----AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTS--DGEAT 510
R ++ +H ++ +HRD+K SN+L++S K+ DFGLA+++ +++ + E T
Sbjct: 117 FIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 511 -----VTKVVGTFGYLAPE-YLTDGLATAKSDVYAFGVVLFEI 547
+ + V T Y APE LT + DV++ G +L E+
Sbjct: 174 GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++++ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 25/203 (12%)
Query: 359 LGHGTYGSVYYG--NIRNQEVAIKRMTATKTKE-----FMAEMKILCKVHHSNLVELIGY 411
LG GTYG VY + N+ VAIKR+ +E + E+ +L ++ H N++EL
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTH 471
L LI+EYA+ K +P + S++ ++ G+ + H
Sbjct: 102 IHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQL------INGVNFCHSR---R 152
Query: 472 YVHRDIKSSNILLDSAFRA-----KISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL 526
+HRD+K N+LL + + KI DFGLA+ G T + T Y PE L
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI---RQFTHEIITLWYRPPEIL 209
Query: 527 TDGLATAKS-DVYAFGVVLFEII 548
+ S D+++ + E++
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEML 232
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 28/212 (13%)
Query: 358 LLGHGTYGSVY--YGNIRNQEVAIKRMTAT----KTKEFM-AEMKILCKVHHSNLVELIG 410
+LG G + V I +QE A+K + +++ F EM C+ H N++ELI
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ-GHRNVLELIE 78
Query: 411 YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
+ ED +L++E + GS+ SH+H ++ + S +++ D A L+++H
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ-----DVASALDFLH---NK 130
Query: 471 HYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSDGEATVTKVV----GTFGYLAP 523
HRD+K NIL + + KI DFGL + D T + G+ Y+AP
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 524 EYL-----TDGLATAKSDVYAFGVVLFEIISG 550
E + + + D+++ GV+L+ ++SG
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 12/103 (11%)
Query: 451 VQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD---- 506
+ + ARG+E++ + +HRD+ + NILL KI DFGLA+ + K D
Sbjct: 202 ISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK 258
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
G+ + ++APE + D + + KSDV+++GV+L+EI S
Sbjct: 259 GDTRLP-----LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 34/215 (15%)
Query: 356 SSLLGHGTYGSVYYGNIRN--QEVAIKRMTATK-----TKE------FMAEMKILCKVHH 402
S LG G G V R ++VAIK ++ K +E E++IL K++H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 403 SNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLE 462
++++ + ED +++ E + G L + R + + + Q+ L ++
Sbjct: 75 PCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLL----AVQ 128
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
Y+HE+ +HRD+K N+LL S KI+DFG +K++G+TS + + GT
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPT 181
Query: 520 YLAPEYL----TDGLATAKSDVYAFGVVLFEIISG 550
YLAPE L T G A D ++ GV+LF +SG
Sbjct: 182 YLAPEVLVSVGTAGYNRA-VDCWSLGVILFICLSG 215
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ + I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 34/215 (15%)
Query: 356 SSLLGHGTYGSVYYGNIRN--QEVAIKRMTATK-----TKE------FMAEMKILCKVHH 402
S LG G G V R ++VAIK ++ K +E E++IL K++H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 403 SNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLE 462
++++ + ED +++ E + G L + R + + + Q+ L ++
Sbjct: 75 PCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLL----AVQ 128
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
Y+HE+ +HRD+K N+LL S KI+DFG +K++G+TS + + GT
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPT 181
Query: 520 YLAPEYL----TDGLATAKSDVYAFGVVLFEIISG 550
YLAPE L T G A D ++ GV+LF +SG
Sbjct: 182 YLAPEVLVSVGTAGYNRA-VDCWSLGVILFICLSG 215
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 34/215 (15%)
Query: 356 SSLLGHGTYGSVYYGNIRN--QEVAIKRMTATK-----TKE------FMAEMKILCKVHH 402
S LG G G V R ++VAIK ++ K +E E++IL K++H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 403 SNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLE 462
++++ + ED +++ E + G L + R + + + Q+ L ++
Sbjct: 75 PCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLL----AVQ 128
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
Y+HE+ +HRD+K N+LL S KI+DFG +K++G+TS + + GT
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPT 181
Query: 520 YLAPEYL----TDGLATAKSDVYAFGVVLFEIISG 550
YLAPE L T G A D ++ GV+LF +SG
Sbjct: 182 YLAPEVLVSVGTAGYNRA-VDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 34/215 (15%)
Query: 356 SSLLGHGTYGSVYYGNIRN--QEVAIKRMTATK-----TKE------FMAEMKILCKVHH 402
S LG G G V R ++VAIK ++ K +E E++IL K++H
Sbjct: 14 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 73
Query: 403 SNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLE 462
++++ + ED +++ E + G L + R + + + Q+ L ++
Sbjct: 74 PCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLL----AVQ 127
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
Y+HE+ +HRD+K N+LL S KI+DFG +K++G+TS + + GT
Sbjct: 128 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPT 180
Query: 520 YLAPEYL----TDGLATAKSDVYAFGVVLFEIISG 550
YLAPE L T G A D ++ GV+LF +SG
Sbjct: 181 YLAPEVLVSVGTAGYNRA-VDCWSLGVILFICLSG 214
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ + I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 34/215 (15%)
Query: 356 SSLLGHGTYGSVYYGNIRN--QEVAIKRMTATK-----TKE------FMAEMKILCKVHH 402
S LG G G V R ++VAIK ++ K +E E++IL K++H
Sbjct: 21 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 80
Query: 403 SNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLE 462
++++ + ED +++ E + G L + R + + + Q+ L ++
Sbjct: 81 PCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLL----AVQ 134
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
Y+HE+ +HRD+K N+LL S KI+DFG +K++G+TS + + GT
Sbjct: 135 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPT 187
Query: 520 YLAPEYL----TDGLATAKSDVYAFGVVLFEIISG 550
YLAPE L T G A D ++ GV+LF +SG
Sbjct: 188 YLAPEVLVSVGTAGYNRA-VDCWSLGVILFICLSG 221
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ + I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 26/217 (11%)
Query: 353 FSDSSLLGHGTYGSVYYGNIRNQE--VAIKRMTATKTKEFM-AEMKILCKVHHSNLVELI 409
F S LG G VY + + A+K + T K+ + E+ +L ++ H N+++L
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLK 114
Query: 410 GYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----GLEYIH 465
T E+ L+ E G L + + + A DA + + Y+H
Sbjct: 115 EIFETPTEISLVLELVTGGELFDRIVEKGYYSERD---------AADAVKQILEAVAYLH 165
Query: 466 EHTKTHYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
E+ VHRD+K N+L + KI+DFGL+K+V + + + V GT GY A
Sbjct: 166 ENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV----EHQVLMKTVCGTPGYCA 218
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEG 559
PE L + D+++ G++ + ++ G E G
Sbjct: 219 PEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG 255
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 45/225 (20%)
Query: 359 LGHGTYGSVYYGNIRN--QEVAIKRM-----TATKTKEFMAEMKILCKVH-HSNLVELIG 410
LG G YG V+ R + VA+K++ +T + E+ IL ++ H N+V L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 411 Y--AATEDELFLIYEYAQ---KGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
A + +++L+++Y + +++++ +P + + + + ++Y+H
Sbjct: 77 VLRADNDRDVYLVFDYMETDLHAVIRANILEP----------VHKQYVVYQLIKVIKYLH 126
Query: 466 EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKL------------------VGKTSDG 507
+HRD+K SNILL++ K++DFGL++ D
Sbjct: 127 SGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 508 EATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
+ +T V T Y APE L K D+++ G +L EI+ GK
Sbjct: 184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 22/209 (10%)
Query: 353 FSDSSLLGHGTYGS-VYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKV-HHSNLVELIG 410
F +LGHG G+ VY G N++VA+KR+ E+++L + H N+ I
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNV---IR 82
Query: 411 YAATEDELFLIYEYAQ--KGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHT 468
Y TE + Y + +L+ ++ + ++ L I +Q GL ++H
Sbjct: 83 YFCTEKDRQFQYIAIELCAATLQEYV-EQKDFAHLGLEPITLLQ---QTTSGLAHLH--- 135
Query: 469 KTHYVHRDIKSSNILLD-----SAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
+ VHRD+K NIL+ +A ISDFGL K + + + V GT G++AP
Sbjct: 136 SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
Query: 524 EYLTDGLA---TAKSDVYAFGVVLFEIIS 549
E L++ T D+++ G V + +IS
Sbjct: 196 EMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 358 LLGHGTYGSVYYG-NIRNQE-VAIKRMT--ATKTKE--FMAEMKILCKVHHSNLVELIGY 411
+LG G + V + R Q+ VAIK + A + KE E+ +L K+ H N+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTH 471
+ L+LI + G L + + + S ++ Q+ LDA + Y+H+
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI-FQV-LDAVK---YLHD---LG 136
Query: 472 YVHRDIKSSNIL---LDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
VHRD+K N+L LD + ISDFGL+K+ D + ++ GT GY+APE L
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 529 GLATAKSDVYAFGVVLFEIISG 550
+ D ++ GV+ + ++ G
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG 214
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 12/100 (12%)
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD----GEA 509
+ A+G+E++ +HRD+ + NILL KI DFGLA+ + K D G+A
Sbjct: 204 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 510 TVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ ++APE + D + T +SDV++FGV+L+EI S
Sbjct: 261 RLP-----LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 358 LLGHGTYGSVYYG-NIRNQE-VAIKRMT--ATKTKE--FMAEMKILCKVHHSNLVELIGY 411
+LG G + V + R Q+ VAIK + A + KE E+ +L K+ H N+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTH 471
+ L+LI + G L + + + S ++ Q+ LDA + Y+H+
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI-FQV-LDAVK---YLHD---LG 136
Query: 472 YVHRDIKSSNIL---LDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
VHRD+K N+L LD + ISDFGL+K+ D + ++ GT GY+APE L
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 529 GLATAKSDVYAFGVVLFEIISG 550
+ D ++ GV+ + ++ G
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG 214
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 26/208 (12%)
Query: 354 SDSSLLGHGTYGSVYYGNIRNQEVA---------IKRMTATKTKEFMAEMKILCKVHHSN 404
S + +LG G +G V+ + +E A IK +E E+ ++ ++ H+N
Sbjct: 92 SKTEILGGGRFGQVH----KCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHAN 147
Query: 405 LVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
L++L +++++ L+ EY G L + D ++ T L I+ ++ G+ ++
Sbjct: 148 LIQLYDAFESKNDIVLVMEYVDGGELFDRIID-ESYNLTELDTILFMK---QICEGIRHM 203
Query: 465 HEHTKTHYVHRDIKSSNILL--DSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
H+ + +H D+K NIL A + KI DFGLA+ + GT +LA
Sbjct: 204 HQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN----FGTPEFLA 256
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + + +D+++ GV+ + ++SG
Sbjct: 257 PEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 358 LLGHGTYGSVYYG-NIRNQE-VAIKRMT--ATKTKE--FMAEMKILCKVHHSNLVELIGY 411
+LG G + V + R Q+ VAIK + A + KE E+ +L K+ H N+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTH 471
+ L+LI + G L + + + S ++ Q+ LDA + Y+H+
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI-FQV-LDAVK---YLHD---LG 136
Query: 472 YVHRDIKSSNIL---LDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
VHRD+K N+L LD + ISDFGL+K+ D + ++ GT GY+APE L
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 529 GLATAKSDVYAFGVVLFEIISG 550
+ D ++ GV+ + ++ G
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG 214
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 12/100 (12%)
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD----GEA 509
+ A+G+E++ +HRD+ + NILL KI DFGLA+ + K D G+A
Sbjct: 206 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 510 TVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ ++APE + D + T +SDV++FGV+L+EI S
Sbjct: 263 RLP-----LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 12/100 (12%)
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD----GEA 509
+ A+G+E++ +HRD+ + NILL KI DFGLA+ + K D G+A
Sbjct: 199 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 510 TVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ ++APE + D + T +SDV++FGV+L+EI S
Sbjct: 256 RLP-----LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 12/100 (12%)
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD----GEA 509
+ A+G+E++ +HRD+ + NILL KI DFGLA+ + K D G+A
Sbjct: 197 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 510 TVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIIS 549
+ ++APE + D + T +SDV++FGV+L+EI S
Sbjct: 254 RLP-----LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 34/215 (15%)
Query: 356 SSLLGHGTYGSVYYGNIRN--QEVAIKRMTATK-----------TKEFMAEMKILCKVHH 402
S LG G G V R ++VAI+ ++ K E++IL K++H
Sbjct: 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 199
Query: 403 SNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLE 462
++++ + ED +++ E + G L + R + + + Q+ L ++
Sbjct: 200 PCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLL----AVQ 253
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
Y+HE+ +HRD+K N+LL S KI+DFG +K++G+TS + + GT
Sbjct: 254 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPT 306
Query: 520 YLAPEYL----TDGLATAKSDVYAFGVVLFEIISG 550
YLAPE L T G A D ++ GV+LF +SG
Sbjct: 307 YLAPEVLVSVGTAGYNRA-VDCWSLGVILFICLSG 340
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT YLA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEYLA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
P + D +A GV+++E+ +G
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 28/211 (13%)
Query: 359 LGHGTYGSVYYGNIRN----QEVAIKRMTAT----KTKEFMAEMKILCK-VHHSNLVELI 409
LG G YG V +R+ Q +A+KR+ AT + K + ++ I + V V
Sbjct: 15 LGRGAYGVV--EKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 72
Query: 410 GYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTK 469
G E ++++ E SL ++GQT I+ +IA+ + LE H H+K
Sbjct: 73 GALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILG-KIAVSIVKALE--HLHSK 128
Query: 470 THYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDG 529
+HRD+K SN+L+++ + K+ DFG++ G D A G Y+APE +
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGIS---GYLVDDVAKDID-AGCKPYMAPERINPE 184
Query: 530 LA----TAKSDVYAFGVVLFEIISGKEAIIR 556
L + KSD+++ G+ + E+ AI+R
Sbjct: 185 LNQKGYSVKSDIWSLGITMIEL-----AILR 210
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 23 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII 82
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 83 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 129
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 130 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 186
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 187 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 34/215 (15%)
Query: 356 SSLLGHGTYGSVYYGNIRN--QEVAIKRMTATK-----------TKEFMAEMKILCKVHH 402
S LG G G V R ++VAI+ ++ K E++IL K++H
Sbjct: 154 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 213
Query: 403 SNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLE 462
++++ + ED +++ E + G L + R + + + Q+ L ++
Sbjct: 214 PCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLL----AVQ 267
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSDGEATVTKVVGTFG 519
Y+HE+ +HRD+K N+LL S KI+DFG +K++G+TS + + GT
Sbjct: 268 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPT 320
Query: 520 YLAPEYL----TDGLATAKSDVYAFGVVLFEIISG 550
YLAPE L T G A D ++ GV+LF +SG
Sbjct: 321 YLAPEVLVSVGTAGYNRA-VDCWSLGVILFICLSG 354
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII 63
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 110
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 168 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 24 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII 83
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 84 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 130
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 131 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 187
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 188 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 42/221 (19%)
Query: 351 EGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----TKTKEFMAEMKILCKVHHS 403
E + + S +G G YGSV + VA+K+++ K E+++L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 404 NLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD---- 456
N++ L+ A + +E +Y L +HL L+ I++ Q D
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ADLNNIVKCQKLTDDHVQ 128
Query: 457 -----AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATV 511
RGL+YIH +HRD+K SN+ ++ KI DFGLA + +D E +
Sbjct: 129 FLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDE--M 179
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 180 TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 9 ERPTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 68
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 115
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 116 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKIL 172
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 173 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 42/221 (19%)
Query: 351 EGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----TKTKEFMAEMKILCKVHHS 403
E + + S +G G YGSV + VA+K+++ K E+++L + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 404 NLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD---- 456
N++ L+ A + +E +Y L +HL L+ I++ Q D
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ADLNNIVKCQKLTDDHVQ 124
Query: 457 -----AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATV 511
RGL+YIH +HRD+K SN+ ++ KI DFGLA + +D E +
Sbjct: 125 FLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDE--M 175
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 30/215 (13%)
Query: 351 EGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----TKTKEFMAEMKILCKVHHS 403
E + + S +G G YGSV + VA+K+++ K E+++L + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 404 NLVELIGY---AATEDELFLIYEYAQKGSLKSHLH--DPQNRGQTSLSWIMRVQIAL-DA 457
N++ L+ A + +E +Y L +HL D N + + VQ +
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVY-------LVTHLMGADLNNIVKCAKLTDDHVQFLIYQI 130
Query: 458 ARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT 517
RGL+YIH +HRD+K SN+ ++ KI DFGLA + +D E +T V T
Sbjct: 131 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDE--MTGYVAT 181
Query: 518 FGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 47/248 (18%)
Query: 329 GTDVFDM--EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKR 381
G+ + +M E+P + + I E + + S +G G YGSV + VA+K+
Sbjct: 18 GSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 77
Query: 382 MTA-----TKTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSH 433
++ K E+++L + H N++ L+ A + +E +Y L +H
Sbjct: 78 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTH 130
Query: 434 LHDPQNRGQTSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILL 484
L L+ I++ Q D RGL+YIH +HRD+K SN+ +
Sbjct: 131 LMG------ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAV 181
Query: 485 DSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVV 543
+ KI DFGLA + +D E +T V T Y APE + + + ++ D+++ G +
Sbjct: 182 NEDCELKILDFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 235
Query: 544 LFEIISGK 551
+ E+++G+
Sbjct: 236 MAELLTGR 243
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 10 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII 69
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 70 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHL------MG 116
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 117 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 173
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 174 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 47/248 (18%)
Query: 329 GTDVFDM--EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKR 381
G+ + +M E+P + + I E + + S +G G YGSV + VA+K+
Sbjct: 1 GSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 60
Query: 382 MTA-----TKTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSH 433
++ K E+++L + H N++ L+ A + +E +Y L +H
Sbjct: 61 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTH 113
Query: 434 LHDPQNRGQTSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILL 484
L L+ I++ Q D RGL+YIH +HRD+K SN+ +
Sbjct: 114 LMG------ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAV 164
Query: 485 DSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVV 543
+ KI DFGLA + +D E +T V T Y APE + + + ++ D+++ G +
Sbjct: 165 NEDCELKILDFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 544 LFEIISGK 551
+ E+++G+
Sbjct: 219 MAELLTGR 226
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 42/221 (19%)
Query: 351 EGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----TKTKEFMAEMKILCKVHHS 403
E + + S +G G YGSV + VA+K+++ K E+++L + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 404 NLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD---- 456
N++ L+ A + +E +Y L +HL L+ I++ Q D
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ADLNNIVKCQKLTDDHVQ 133
Query: 457 -----AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATV 511
RGL+YIH +HRD+K SN+ ++ KI DFGLA + +D E +
Sbjct: 134 FLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA----RHTDDE--M 184
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 15 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 74
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 75 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 121
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 122 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKIL 178
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 179 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 32/208 (15%)
Query: 359 LGHGTYGSV---YYGNIRNQEVAIKRMTA-----TKTKEFMAEMKILCKVHHSNLVELIG 410
+G G YGSV Y +R Q+VA+K+++ + E+++L + H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 411 Y----AATED--ELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
+ ED E++L+ G+ +++ Q + +++ RGL+YI
Sbjct: 95 VFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLV-----YQLLRGLKYI 147
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
H +HRD+K SN+ ++ +I DFGLA+ + +T V T Y APE
Sbjct: 148 H---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR------QADEEMTGYVATRWYRAPE 198
Query: 525 YLTDGLATAKS-DVYAFGVVLFEIISGK 551
+ + + ++ D+++ G ++ E++ GK
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 42/221 (19%)
Query: 351 EGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----TKTKEFMAEMKILCKVHHS 403
E + + S +G G YGSV + VA+K+++ K E+++L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 404 NLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD---- 456
N++ L+ A + +E +Y L +HL L+ I++ Q D
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ADLNNIVKXQKLTDDHVQ 128
Query: 457 -----AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATV 511
RGL+YIH +HRD+K SN+ ++ KI DFGLA + +D E +
Sbjct: 129 FLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA----RHTDDE--M 179
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 29/208 (13%)
Query: 349 ATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVEL 408
T F L+ H G+ Y I +++ +K T + E +IL V+ LV+L
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT---LNEKRILQAVNFPFLVKL 106
Query: 409 IGYAATEDELFLIYEYAQKGSLKSHLH------DPQNRGQTSLSWIMRVQIALDAARGLE 462
L+++ EY G + SHL +P R QI L E
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-------FYAAQIVLT----FE 155
Query: 463 YIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLA 522
Y+H ++RD+K N+L+D +++DFG AK V + + GT LA
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRTWXLCGTPEALA 206
Query: 523 PEYLTDGLATAKSDVYAFGVVLFEIISG 550
PE + D +A GV+++E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 110
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 168 DFGLA----RHTDDE--MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 47/248 (18%)
Query: 329 GTDVFDM--EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKR 381
G+ + +M E+P + + I E + + S +G G YGSV + VA+K+
Sbjct: 1 GSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 60
Query: 382 MTA-----TKTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSH 433
++ K E+++L + H N++ L+ A + +E +Y L +H
Sbjct: 61 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTH 113
Query: 434 LHDPQNRGQTSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILL 484
L L+ I++ Q D RGL+YIH +HRD+K SN+ +
Sbjct: 114 LMG------ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAV 164
Query: 485 DSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVV 543
+ KI DFGLA + +D E +T V T Y APE + + + ++ D+++ G +
Sbjct: 165 NEDSELKILDFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 544 LFEIISGK 551
+ E+++G+
Sbjct: 219 MAELLTGR 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 11 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 70
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 117
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 118 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 174
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA+ T+D +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 175 DFGLAR---HTAD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 19/193 (9%)
Query: 361 HGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFL 420
H T G + I N K+++A ++ E +I K+ H N+V L E +L
Sbjct: 50 HKTTGLEFAAKIIN----TKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105
Query: 421 IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSS 480
+++ G L + + + S +Q L++ + Y H + VHR++K
Sbjct: 106 VFDLVTGGELFEDIVAREFYSEADASHC--IQQILES---IAYCHSNG---IVHRNLKPE 157
Query: 481 NILLDSAFRA---KISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDV 537
N+LL S + K++DFGLA V +D EA GT GYL+PE L + D+
Sbjct: 158 NLLLASKAKGAAVKLADFGLAIEV---NDSEAW-HGFAGTPGYLSPEVLKKDPYSKPVDI 213
Query: 538 YAFGVVLFEIISG 550
+A GV+L+ ++ G
Sbjct: 214 WACGVILYILLVG 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 110
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 168 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 110
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 168 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 110
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 168 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 11 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 70
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 117
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 118 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 174
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA+ T+D +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 175 DFGLAR---HTAD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 6 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 65
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 112
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 113 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 169
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 170 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 11 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 70
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 117
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 118 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 174
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA+ T+D +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 175 DFGLAR---HTAD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 24 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 83
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 84 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 130
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 131 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 187
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 188 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 16 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 75
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 76 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 122
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 123 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 179
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 180 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 16 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 75
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 76 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 122
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 123 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 179
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 180 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 16 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSII 75
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 76 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 122
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 123 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 179
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 180 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 23 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 82
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 83 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 129
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 130 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 186
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 187 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 42/221 (19%)
Query: 351 EGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----TKTKEFMAEMKILCKVHHS 403
E + + S +G G YGSV + VA+K+++ K E+++L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 404 NLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD---- 456
N++ L+ A + +E +Y L +HL L+ I++ Q D
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ADLNNIVKCQKLTDDHVQ 128
Query: 457 -----AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATV 511
RGL+YIH +HRD+K SN+ ++ KI DFGLA + +D E +
Sbjct: 129 FLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDE--M 179
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 11 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 70
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 71 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 117
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 118 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 174
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 175 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 110
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 168 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 110
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 168 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 110
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 168 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 9 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 68
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 115
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 116 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 172
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 173 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 6 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 65
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 112
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 113 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 169
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 170 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 3 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 62
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 63 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 109
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 110 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 166
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 167 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 32/208 (15%)
Query: 359 LGHGTYGSV---YYGNIRNQEVAIKRMTA-----TKTKEFMAEMKILCKVHHSNLVELIG 410
+G G YGSV Y +R Q+VA+K+++ + E+++L + H N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 86
Query: 411 Y----AATED--ELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
+ ED E++L+ G+ +++ Q + +++ RGL+YI
Sbjct: 87 VFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLV-----YQLLRGLKYI 139
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
H +HRD+K SN+ ++ +I DFGLA+ + +T V T Y APE
Sbjct: 140 H---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR------QADEEMTGYVATRWYRAPE 190
Query: 525 YLTDGLATAKS-DVYAFGVVLFEIISGK 551
+ + + ++ D+++ G ++ E++ GK
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 110
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 111 ADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 168 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 6 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 65
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 112
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 113 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKIL 169
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 170 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 15 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 74
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 75 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 121
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 122 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 178
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 179 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 1 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 60
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 61 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 107
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 108 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 164
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 165 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 42/221 (19%)
Query: 351 EGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----TKTKEFMAEMKILCKVHHS 403
E + + S +G G YGSV + VA+K+++ K E+++L + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 404 NLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD---- 456
N++ L+ A + +E +Y L +HL L+ I++ Q D
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ADLNNIVKCQKLTDDHVQ 124
Query: 457 -----AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATV 511
RGL+YIH +HRD+K SN+ ++ KI DFGLA + +D E +
Sbjct: 125 FLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDE--M 175
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 42/221 (19%)
Query: 351 EGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----TKTKEFMAEMKILCKVHHS 403
E + + S +G G YGSV + VA+K+++ K E+++L + H
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 79
Query: 404 NLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD---- 456
N++ L+ A + +E +Y L +HL L+ I++ Q D
Sbjct: 80 NVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ADLNNIVKCQKLTDDHVQ 126
Query: 457 -----AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATV 511
RGL+YIH +HRD+K SN+ ++ KI DFGLA + +D E +
Sbjct: 127 FLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDE--M 177
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 178 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 1 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 60
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 61 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 107
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 108 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 164
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 165 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + + +G G YGSV + VA+K+++
Sbjct: 14 ERPTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII 73
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 74 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 120
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 121 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 177
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 178 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 19/193 (9%)
Query: 361 HGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFL 420
H T G + I N K+++A ++ E +I K+ H N+V L E +L
Sbjct: 27 HKTTGLEFAAKIIN----TKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82
Query: 421 IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSS 480
+++ G L + + + S ++ QI + Y H + VHR++K
Sbjct: 83 VFDLVTGGELFEDIVAREFYSEADASHCIQ-QIL----ESIAYCHSNG---IVHRNLKPE 134
Query: 481 NILLDSAFRA---KISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDV 537
N+LL S + K++DFGLA V +D EA GT GYL+PE L + D+
Sbjct: 135 NLLLASKAKGAAVKLADFGLAIEV---NDSEAW-HGFAGTPGYLSPEVLKKDPYSKPVDI 190
Query: 538 YAFGVVLFEIISG 550
+A GV+L+ ++ G
Sbjct: 191 WACGVILYILLVG 203
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 28/212 (13%)
Query: 358 LLGHGTYGSVY--YGNIRNQEVAIKRMTAT----KTKEFM-AEMKILCKVHHSNLVELIG 410
+LG G + V I +QE A+K + +++ F EM C+ H N++ELI
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ-GHRNVLELIE 78
Query: 411 YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
+ ED +L++E + GS+ SH+H ++ + S +++ D A L+++H
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ-----DVASALDFLH---NK 130
Query: 471 HYVHRDIKSSNILLDSAFR---AKISDFGLAKLVGKTSDGEATVTKVV----GTFGYLAP 523
HRD+K NIL + + KI DF L + D T + G+ Y+AP
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 524 EYL-----TDGLATAKSDVYAFGVVLFEIISG 550
E + + + D+++ GV+L+ ++SG
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 9 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 68
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 69 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 115
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 116 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 172
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 173 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 6 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 65
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 66 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 112
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 113 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 169
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 170 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 19/193 (9%)
Query: 361 HGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFL 420
H T G + I N K+++A ++ E +I K+ H N+V L E +L
Sbjct: 27 HKTTGLEFAAKIIN----TKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82
Query: 421 IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSS 480
+++ G L + + + S +Q L++ + Y H + VHR++K
Sbjct: 83 VFDLVTGGELFEDIVAREFYSEADASHC--IQQILES---IAYCHSNG---IVHRNLKPE 134
Query: 481 NILLDSAFRA---KISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDV 537
N+LL S + K++DFGLA V +D EA GT GYL+PE L + D+
Sbjct: 135 NLLLASKAKGAAVKLADFGLAIEV---NDSEAW-HGFAGTPGYLSPEVLKKDPYSKPVDI 190
Query: 538 YAFGVVLFEIISG 550
+A GV+L+ ++ G
Sbjct: 191 WACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 19/193 (9%)
Query: 361 HGTYGSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFL 420
H T G + I N K+++A ++ E +I K+ H N+V L E +L
Sbjct: 26 HKTTGLEFAAKIIN----TKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 81
Query: 421 IYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSS 480
+++ G L + + + S ++ QI + Y H + VHR++K
Sbjct: 82 VFDLVTGGELFEDIVAREFYSEADASHCIQ-QIL----ESIAYCHSNG---IVHRNLKPE 133
Query: 481 NILLDSAFRA---KISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDV 537
N+LL S + K++DFGLA V +D EA GT GYL+PE L + D+
Sbjct: 134 NLLLASKAKGAAVKLADFGLAIEV---NDSEAW-HGFAGTPGYLSPEVLKKDPYSKPVDI 189
Query: 538 YAFGVVLFEIISG 550
+A GV+L+ ++ G
Sbjct: 190 WACGVILYILLVG 202
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 36/209 (17%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G G V Y I + VAIK+++ T K E+ ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----------GL 461
+ L E Q + L D +LS + +Q+ LD R G+
Sbjct: 92 FTPQKSL----EEFQDVYIVMELMD------ANLSQV--IQMELDHERMSYLLYQMLVGI 139
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H +HRD+K SNI++ S KI DFGLA+ G + +T V T Y
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS----FMMTPYVVTRYYR 192
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISG 550
APE + D+++ GV++ E+I G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 36/209 (17%)
Query: 359 LGHGTYGSVY--YGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G G V Y I + VAIK+++ T K E+ ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----------GL 461
+ L E Q + L D +LS + +Q+ LD R G+
Sbjct: 92 FTPQKSL----EEFQDVYIVMELMD------ANLSQV--IQMELDHERMSYLLYQMLVGI 139
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H +HRD+K SNI++ S KI DFGLA+ G + +T V T Y
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS----FMMTPYVVTRYYR 192
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISG 550
APE + D+++ GV++ E+I G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 24 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII 83
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 84 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 130
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 131 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 187
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA+ G V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 188 DFGLARHTDDEMXG------XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 10 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 69
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 70 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHL------MG 116
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 117 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 173
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 174 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 32/208 (15%)
Query: 359 LGHGTYGSV---YYGNIRNQEVAIKRMTA-----TKTKEFMAEMKILCKVHHSNLVELIG 410
+G G YGSV Y +R Q+VA+K+++ + E+++L + H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 411 Y----AATED--ELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
+ ED E++L+ G+ +++ Q + +++ RGL+YI
Sbjct: 95 VFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLV-----YQLLRGLKYI 147
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
H +HRD+K SN+ ++ +I DFGLA+ + +T V T Y APE
Sbjct: 148 H---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR------QADEEMTGYVATRWYRAPE 198
Query: 525 YLTDGLATAKS-DVYAFGVVLFEIISGK 551
+ + + ++ D+++ G ++ E++ GK
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 103/245 (42%), Gaps = 59/245 (24%)
Query: 359 LGHGTYGSVYYGNIRNQEVAI---KRMTATKTKEF--------MAEMKILCKVHHSNLVE 407
+G G+YG V I NQ AI K M K ++ E++++ K+HH N+
Sbjct: 34 IGQGSYGVVRVA-IENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIAR 92
Query: 408 LIGYAATEDELF--LIYEYAQKGSLKSHLH----DPQNRG-------------------- 441
L Y EDE + L+ E G L L+ D +
Sbjct: 93 L--YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAI 150
Query: 442 -------QTSLSWIMRVQIALDAAR----GLEYIHEHTKTHYVHRDIKSSNILL--DSAF 488
+ SL ++ R ++ + R L Y+H HRDIK N L + +F
Sbjct: 151 NGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSF 207
Query: 489 RAKISDFGLAKLVGKTSDGE-ATVTKVVGTFGYLAPEYL--TDGLATAKSDVYAFGVVLF 545
K+ DFGL+K K ++GE +T GT ++APE L T+ K D ++ GV+L
Sbjct: 208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLH 267
Query: 546 EIISG 550
++ G
Sbjct: 268 LLLMG 272
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII 63
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 110
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E + V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 168 DFGLA----RHTDDE--MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII 63
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 110
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E + V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 168 DFGLA----RHTDDE--MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 24/243 (9%)
Query: 359 LGHGTYGSVYYGNIR--NQEVAIKRMTATKTKE-----FMAEMKILCKVHHSNLVELIGY 411
+G GTYG+V+ R ++ VA+KR+ E + E+ +L ++ H N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTH 471
++ +L L++E+ + LK + + L + +GL + H +
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYF----DSCNGDLDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 472 YVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDG-L 530
+HRD+K N+L++ K++DFGLA+ G + V T Y P+ L L
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPV---RCYSAEVVTLWYRPPDVLFGAKL 178
Query: 531 ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSL 590
+ D+++ G + E+ + + G +Q +R F L SM+ L
Sbjct: 179 YSTSIDMWSAGCIFAELANAARPLF--PGNDVDDQLKR---IFRLLGTPTEEQWPSMTKL 233
Query: 591 KDY 593
DY
Sbjct: 234 PDY 236
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 35/209 (16%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEFMA-----EMKILCKVHHSNLVELIGY 411
+G G YGSV ++VAIK+++ E A E+ +L + H N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA--------RGLEY 463
L Y++ +L P QT L IM ++ + + +GL+Y
Sbjct: 110 FTPASSLRNFYDF--------YLVMP--FMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKY 159
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
IH VHRD+K N+ ++ KI DFGLA+ +A +T V T Y AP
Sbjct: 160 IHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR------HADAEMTGYVVTRWYRAP 210
Query: 524 EYLTDGLATAKS-DVYAFGVVLFEIISGK 551
E + + ++ D+++ G ++ E+++GK
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 42/221 (19%)
Query: 351 EGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----TKTKEFMAEMKILCKVHHS 403
E + + S +G G YGSV + VA+K+++ K E+++L + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 404 NLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD---- 456
N++ L+ A + +E +Y L +HL L+ I++ Q D
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ADLNNIVKCQKLTDDHVQ 124
Query: 457 -----AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATV 511
RGL+YIH +HRD+K SN+ ++ KI DFGLA + +D E +
Sbjct: 125 FLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDE--M 175
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 176 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 35/209 (16%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEFMA-----EMKILCKVHHSNLVELIGY 411
+G G YGSV ++VAIK+++ E A E+ +L + H N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIM-------RVQ-IALDAARGLEY 463
L Y++ +L P QT L IM ++Q + +GL+Y
Sbjct: 92 FTPASSLRNFYDF--------YLVMP--FMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKY 141
Query: 464 IHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAP 523
IH VHRD+K N+ ++ KI DFGLA+ +A +T V T Y AP
Sbjct: 142 IHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR------HADAEMTGYVVTRWYRAP 192
Query: 524 EYLTDGLATAKS-DVYAFGVVLFEIISGK 551
E + + ++ D+++ G ++ E+++GK
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 34/215 (15%)
Query: 353 FSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTATKTKEFMA-----EMKILCKVHHSNL 405
+ D +G G YG+V +VAIK++ E A E+++L + H N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 406 VELIGYAATEDEL------FLIYEY--AQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDA 457
+ L+ ++ L +L+ + G L H + G+ + +++ +
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH----EKLGEDRIQFLVYQML---- 138
Query: 458 ARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT 517
+GL YIH +HRD+K N+ ++ KI DFGLA+ ++ + V T
Sbjct: 139 -KGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR------QADSEMXGXVVT 188
Query: 518 FGYLAPEYLTDGLA-TAKSDVYAFGVVLFEIISGK 551
Y APE + + + T D+++ G ++ E+I+GK
Sbjct: 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 110
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
D+GLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 168 DYGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIRN--QEVAIKRMTATK--------TKEFMAE 393
D++LF + + ++G G + V R Q+ A+K + K T++ E
Sbjct: 18 DDVLF-EDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKRE 76
Query: 394 MKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRG----QTSLSWIM 449
I + H ++VEL+ +++ L++++E+ L + + G + S M
Sbjct: 77 ASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYM 136
Query: 450 RVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILL---DSAFRAKISDFGLAKLVGKTSD 506
R QI L+A R Y H++ + +HRD+K N+LL +++ K+ DFG+A +G++
Sbjct: 137 R-QI-LEALR---YCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG- 187
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
VGT ++APE + DV+ GV+LF ++SG
Sbjct: 188 --LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 33/233 (14%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLH--DPQNR 440
K E+++L + H N++ L+ A + +E +Y L +HL D N
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMGADLNNI 116
Query: 441 GQTSLSWIMRVQIAL-DAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAK 499
++ VQ + RGL+YIH +HRD+K SN+ ++ KI DFGL
Sbjct: 117 VKSQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLC- 172
Query: 500 LVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
+ +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 173 ---RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + S +G G YGSV Y ++A+K+++
Sbjct: 33 ERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSII 92
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 93 HAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVY-------LVTHLMG------ 139
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 140 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 196
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA + +D E +T V T Y APE + + + + D+++ G ++ E+++G+
Sbjct: 197 DFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 27/209 (12%)
Query: 358 LLGHGTYGSVYYGNIRNQEVAIKRMTATKTK-----------EFMAEMKILCKVHHSNLV 406
LLG G+YG V + + E +R K E+++L ++ H N++
Sbjct: 12 LLGEGSYGKV--KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 407 ELIG--YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
+L+ Y + +++++ EY G + P+ R + Q+ GLEY+
Sbjct: 70 QLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLI----DGLEYL 125
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPE 524
H VH+DIK N+LL + KIS G+A+ + + + T G+ + PE
Sbjct: 126 HSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA-ADDTCRTSQGSPAFQPPE 181
Query: 525 YLTDGLAT---AKSDVYAFGVVLFEIISG 550
+ +GL T K D+++ GV L+ I +G
Sbjct: 182 -IANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 27 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 86
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 87 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 133
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 134 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 190
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
DFGLA+ G V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 191 DFGLARHTDDEMXG------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 16/175 (9%)
Query: 379 IKRMTATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQ 438
IK+ A + E+ +L K+ H N+V L + +L+ + G L + +
Sbjct: 42 IKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERG 101
Query: 439 NRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILL---DSAFRAKISDF 495
+ S + +Q L A + Y+HE+ VHRD+K N+L + + I+DF
Sbjct: 102 VYTEKDASLV--IQQVLSAVK---YLHENG---IVHRDLKPENLLYLTPEENSKIMITDF 153
Query: 496 GLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
GL+K+ + ++ GT GY+APE L + D ++ GV+ + ++ G
Sbjct: 154 GLSKM-----EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 87/190 (45%), Gaps = 20/190 (10%)
Query: 365 GSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEY 424
G Y I N K+++A ++ E +I + H N+V L + E +LI++
Sbjct: 47 GQEYAAKIIN----TKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDL 102
Query: 425 AQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILL 484
G L + + + S +Q L+A +H H + VHRD+K N+LL
Sbjct: 103 VTGGELFEDIVAREYYSEADASHC--IQQILEAV-----LHCH-QMGVVHRDLKPENLLL 154
Query: 485 DSAFRA---KISDFGLAKLVGKTSDGEATVT-KVVGTFGYLAPEYLTDGLATAKSDVYAF 540
S + K++DFGLA V +GE GT GYL+PE L D++A
Sbjct: 155 ASKLKGAAVKLADFGLAIEV----EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWAC 210
Query: 541 GVVLFEIISG 550
GV+L+ ++ G
Sbjct: 211 GVILYILLVG 220
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 36/209 (17%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G G V Y I + VAIK+++ T K E+ ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----------GL 461
+ L E Q + L D +LS + +Q+ LD R G+
Sbjct: 92 FTPQKSL----EEFQDVYIVMELMD------ANLSQV--IQMELDHERMSYLLYQMLCGI 139
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H +HRD+K SNI++ S KI DFGLA+ G + +T V T Y
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS----FMMTPYVVTRYYR 192
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISG 550
APE + D+++ G ++ E+I G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 41/224 (18%)
Query: 358 LLGHGTYGSVYYGNIRNQE--VAIKRMTA-----TKTKEFMAEMKILCKVHHSNLVELIG 410
L+G G+YG VY +N E VAIK++ K + E+ IL ++ ++ L
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYD 92
Query: 411 YAATED-----ELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
+D EL+++ E A LK P + + I+ + G +IH
Sbjct: 93 LIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTIL-----YNLLLGENFIH 146
Query: 466 EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDG------------------ 507
E + +HRD+K +N LL+ K+ DFGLA+ + D
Sbjct: 147 E---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKN 203
Query: 508 -EATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIIS 549
+ +T V T Y APE + KS D+++ G + E+++
Sbjct: 204 LKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 18/189 (9%)
Query: 365 GSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEY 424
G Y I N K+++A ++ E +I + HSN+V L + E +L+++
Sbjct: 29 GHEYAAKIIN----TKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDL 84
Query: 425 AQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILL 484
G L + + + S +Q L+A +H H + VHRD+K N+LL
Sbjct: 85 VTGGELFEDIVAREYYSEADASHC--IQQILEAV-----LHCH-QMGVVHRDLKPENLLL 136
Query: 485 DSAFRA---KISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFG 541
S + K++DFGLA + D +A GT GYL+PE L D++A G
Sbjct: 137 ASKCKGAAVKLADFGLA--IEVQGDQQAWFG-FAGTPGYLSPEVLRKEAYGKPVDIWACG 193
Query: 542 VVLFEIISG 550
V+L+ ++ G
Sbjct: 194 VILYILLVG 202
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 377 VAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD 436
+ K+++A ++ E +I + H N+V L + E +L+++ G L +
Sbjct: 64 INTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA 123
Query: 437 PQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRA---KIS 493
+ + S + QI + +IH+H VHRD+K N+LL S + K++
Sbjct: 124 REYYSEADASHCIH-QIL----ESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLA 175
Query: 494 DFGLAKLVGKTSDGEATVT-KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
DFGLA V GE GT GYL+PE L D++A GV+L+ ++ G
Sbjct: 176 DFGLAIEV----QGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 36/209 (17%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G G V Y I + VAIK+++ T K E+ ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----------GL 461
+ L E Q + L D +LS + +Q+ LD R G+
Sbjct: 92 FTPQKSL----EEFQDVYIVMELMD------ANLSQV--IQMELDHERMSYLLYQMLVGI 139
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H +HRD+K SNI++ S KI DFGLA+ G + +T V T Y
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS----FMMTPYVVTRYYR 192
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISG 550
APE + D+++ G ++ E+I G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 36/225 (16%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKI 396
D + + + +G G G V Y + ++ VAIK+++ T K E+ +
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD 456
+ V+H N++ L+ + L E Q L L D N Q +Q+ LD
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMD-ANLXQV-------IQMELD 124
Query: 457 AAR----------GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD 506
R G++++H +HRD+K SNI++ S KI DFGLA+ G +
Sbjct: 125 HERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS-- 179
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+T V T Y APE + D+++ G ++ E++ K
Sbjct: 180 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 36/210 (17%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G G V Y + ++ VAIK+++ T K E+ ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----------GL 461
+ L E Q L L D N Q +Q+ LD R G+
Sbjct: 92 FTPQKTL----EEFQDVYLVMELMD-ANLXQV-------IQMELDHERMSYLLYQMLCGI 139
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H +HRD+K SNI++ S KI DFGLA+ G + +T V T Y
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS----FMMTPYVVTRYYR 192
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGK 551
APE + D+++ G ++ E++ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 97/234 (41%), Gaps = 44/234 (18%)
Query: 351 EGFSDSSLLGHGTYGSVY--YGNIRNQEVAIKRMTA-----TKTKEFMAEMKILCKVHHS 403
+ + L+G G+YG VY Y N+ VAIK++ K + E+ IL ++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 404 NLVELIGYAATED-----ELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAA 458
++ L ED EL+++ E A LK P + + I+ +
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIAD-SDLKKLFKTPIFLTEQHVKTIL-----YNLL 141
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD------------ 506
G ++IHE + +HRD+K +N LL+ KI DFGLA+ + D
Sbjct: 142 LGEKFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEE 198
Query: 507 ----------GEATVTKVVGTFGYLAPEY-LTDGLATAKSDVYAFGVVLFEIIS 549
+ +T V T Y APE L T D+++ G + E+++
Sbjct: 199 NEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 115/260 (44%), Gaps = 42/260 (16%)
Query: 353 FSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTAT---KTKEFMAEMKILCKVHHSNLV- 406
+ D LG G G V+ N ++ VAIK++ T K + E+KI+ ++ H N+V
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 407 --ELIGYAATE-----------DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQI 453
E++G + ++ + ++++ EY + P L
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL-------F 125
Query: 454 ALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSA-FRAKISDFGLAKLVGKTSDGEATVT 512
RGL+YIH + +HRD+K +N+ +++ KI DFGLA+++ + ++
Sbjct: 126 MYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS 182
Query: 513 KVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGKE-----------AIIRTEGM 560
+ + T Y +P L K+ D++A G + E+++GK +I
Sbjct: 183 EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIP 242
Query: 561 VSKNQERRSLASFMLAALRN 580
V ++R+ L S + +RN
Sbjct: 243 VVHEEDRQELLSVIPVYIRN 262
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 42/221 (19%)
Query: 351 EGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----TKTKEFMAEMKILCKVHHS 403
E + + S +G G YGSV + VA+K+++ K E+++L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 404 NLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD---- 456
N++ L+ A + +E +Y L +HL L+ I++ Q D
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ADLNNIVKCQKLTDDHVQ 128
Query: 457 -----AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATV 511
RGL+YIH +HRD+K SN+ ++ KI DF LA + +D E +
Sbjct: 129 FLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLA----RHTDDE--M 179
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 36/209 (17%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G G V Y I + VAIK+++ T K E+ ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----------GL 461
+ L E Q + L D +LS + +Q+ LD R G+
Sbjct: 92 FTPQKSL----EEFQDVYIVMELMD------ANLSQV--IQMELDHERMSYLLYQMLCGI 139
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H +HRD+K SNI++ S KI DFGLA+ G + +T V T Y
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----FMMTPYVVTRYYR 192
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISG 550
APE + D+++ G ++ E+I G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 36/209 (17%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G G V Y I + VAIK+++ T K E+ ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----------GL 461
+ L E Q + L D +LS + +Q+ LD R G+
Sbjct: 92 FTPQKSL----EEFQDVYIVMELMD------ANLSQV--IQMELDHERMSYLLYQMLCGI 139
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H +HRD+K SNI++ S KI DFGLA+ G + +T V T Y
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS----FMMTPYVVTRYYR 192
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISG 550
APE + D+++ G ++ E+I G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 24/243 (9%)
Query: 359 LGHGTYGSVYYGNIR--NQEVAIKRMTATKTKE-----FMAEMKILCKVHHSNLVELIGY 411
+G GTYG+V+ R ++ VA+KR+ E + E+ +L ++ H N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTH 471
++ +L L++E+ + LK + + L + +GL + H +
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYF----DSCNGDLDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 472 YVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDG-L 530
+HRD+K N+L++ K+++FGLA+ G + V T Y P+ L L
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV---RCYSAEVVTLWYRPPDVLFGAKL 178
Query: 531 ATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPDSMSMSSL 590
+ D+++ G + E+ + + G +Q +R F L SM+ L
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLF--PGNDVDDQLKR---IFRLLGTPTEEQWPSMTKL 233
Query: 591 KDY 593
DY
Sbjct: 234 PDY 236
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 36/210 (17%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G G V Y + ++ VAIK+++ T K E+ ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----------GL 461
+ L E Q L L D N Q +Q+ LD R G+
Sbjct: 92 FTPQKTL----EEFQDVYLVMELMDA-NLCQV-------IQMELDHERMSYLLYQMLCGI 139
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H +HRD+K SNI++ S KI DFGLA+ G + +T V T Y
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS----FMMTPYVVTRYYR 192
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGK 551
APE + D+++ G ++ E++ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 110
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
FGLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 168 GFGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 110
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
D GLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 168 DAGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 110
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
D GLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 168 DRGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 36/225 (16%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKI 396
D + + + +G G G V Y + ++ VAIK+++ T K E+ +
Sbjct: 10 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 69
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD 456
+ V+H N++ L+ + L E Q L L D N Q +Q+ LD
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMD-ANLXQV-------IQMELD 117
Query: 457 AAR----------GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD 506
R G++++H +HRD+K SNI++ S KI DFGLA+ G +
Sbjct: 118 HERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS-- 172
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+T V T Y APE + D+++ G ++ E++ K
Sbjct: 173 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 36/209 (17%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G G V Y I + VAIK+++ T K E+ ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----------GL 461
+ L E Q + L D N Q +Q+ LD R G+
Sbjct: 92 FTPQKSL----EEFQDVYIVMELMD-ANLCQV-------IQMELDHERMSYLLYQMLCGI 139
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H +HRD+K SNI++ S KI DFGLA+ G + +T V T Y
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----FMMTPYVVTRYYR 192
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISG 550
APE + D+++ G ++ E+I G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 13/136 (9%)
Query: 417 ELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRD 476
E+ LI EYA G + S L P+ S + ++R + G+ Y+H++ + VH D
Sbjct: 103 EIILILEYAAGGEIFS-LCLPELAEMVSENDVIR--LIKQILEGVYYLHQN---NIVHLD 156
Query: 477 IKSSNILLDSAF---RAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATA 533
+K NILL S + KI DFG+++ +G + + +++GT YLAPE L T
Sbjct: 157 LKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE----LREIMGTPEYLAPEILNYDPITT 212
Query: 534 KSDVYAFGVVLFEIIS 549
+D++ G++ + +++
Sbjct: 213 ATDMWNIGIIAYMLLT 228
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 36/225 (16%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKI 396
D + + + +G G G V Y + ++ VAIK+++ T K E+ +
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD 456
+ V+H N++ L+ + L E Q L L D N Q +Q+ LD
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMD-ANLXQV-------IQMELD 124
Query: 457 AAR----------GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD 506
R G++++H +HRD+K SNI++ S KI DFGLA+ G +
Sbjct: 125 HERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS-- 179
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+T V T Y APE + D+++ G ++ E++ K
Sbjct: 180 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 36/210 (17%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G G V Y + ++ VAIK+++ T K E+ ++ V+H N++ L+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----------GL 461
+ L E Q L L D N Q +Q+ LD R G+
Sbjct: 130 FTPQKTL----EEFQDVYLVMELMD-ANLCQV-------IQMELDHERMSYLLYQMLCGI 177
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H +HRD+K SNI++ S KI DFGLA+ G + +T V T Y
Sbjct: 178 KHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----FMMTPYVVTRYYR 230
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGK 551
APE + D+++ G ++ E++ K
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 359 LGHGTYGSVYYGN--IRNQEVAIKRMTAT----KTKEFMAEMKILCK-VHHSNLVELIGY 411
LG G YG V Q A+KR+ AT + K + ++ I + V V G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTH 471
E ++++ E SL ++GQT I+ +IA+ + LE H H+K
Sbjct: 102 LFREGDVWICXELXDT-SLDKFYKQVIDKGQTIPEDILG-KIAVSIVKALE--HLHSKLS 157
Query: 472 YVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLA 531
+HRD+K SN+L+++ + K DFG++ G D A G Y APE + L
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGIS---GYLVDDVAKDID-AGCKPYXAPERINPELN 213
Query: 532 ----TAKSDVYAFGVVLFEIISGKEAIIR 556
+ KSD+++ G+ E+ AI+R
Sbjct: 214 QKGYSVKSDIWSLGITXIEL-----AILR 237
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 36/225 (16%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKI 396
D + + + +G G G V Y + ++ VAIK+++ T K E+ +
Sbjct: 11 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 70
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD 456
+ V+H N++ L+ + L E Q L L D N Q +Q+ LD
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMD-ANLCQV-------IQMELD 118
Query: 457 AAR----------GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD 506
R G++++H +HRD+K SNI++ S KI DFGLA+ G +
Sbjct: 119 HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 173
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+T V T Y APE + D+++ G ++ E++ K
Sbjct: 174 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 36/225 (16%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKI 396
D + + + +G G G V Y + ++ VAIK+++ T K E+ +
Sbjct: 10 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 69
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD 456
+ V+H N++ L+ + L E Q L L D N Q +Q+ LD
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMD-ANLCQV-------IQMELD 117
Query: 457 AAR----------GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD 506
R G++++H +HRD+K SNI++ S KI DFGLA+ G +
Sbjct: 118 HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 172
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+T V T Y APE + D+++ G ++ E++ K
Sbjct: 173 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 36/209 (17%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G G V Y I + VAIK+++ T K E+ ++ V+H N++ L+
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----------GL 461
+ L E Q + L D N Q +Q+ LD R G+
Sbjct: 93 FTPQKSL----EEFQDVYIVMELMD-ANLCQV-------IQMELDHERMSYLLYQMLCGI 140
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H +HRD+K SNI++ S KI DFGLA+ G + +T V T Y
Sbjct: 141 KHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----FMMTPYVVTRYYR 193
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISG 550
APE + D+++ G ++ E+I G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 36/224 (16%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKI 396
D + + + +G G G V Y I + VAIK+++ T K E+ +
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD 456
+ V+H N++ L+ + L E Q + L D N Q +Q+ LD
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSL----EEFQDVYIVMELMD-ANLCQV-------IQMELD 124
Query: 457 AAR----------GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD 506
R G++++H +HRD+K SNI++ S KI DFGLA+ G +
Sbjct: 125 HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 179
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+T V T Y APE + D+++ G ++ E+I G
Sbjct: 180 --FMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 36/225 (16%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKI 396
D + + + +G G G V Y + ++ VAIK+++ T K E+ +
Sbjct: 18 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 77
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD 456
+ V+H N++ L+ + L E Q L L D N Q +Q+ LD
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMD-ANLCQV-------IQMELD 125
Query: 457 AAR----------GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD 506
R G++++H +HRD+K SNI++ S KI DFGLA+ G +
Sbjct: 126 HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 180
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+T V T Y APE + D+++ G ++ E++ K
Sbjct: 181 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 45/239 (18%)
Query: 336 EKPVVFTYD---EILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMTA-----T 385
E+P + + I E + + S +G G YGSV + VA+K+++
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII 63
Query: 386 KTKEFMAEMKILCKVHHSNLVELIGY---AATEDELFLIYEYAQKGSLKSHLHDPQNRGQ 442
K E+++L + H N++ L+ A + +E +Y L +HL
Sbjct: 64 HAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY-------LVTHLMG------ 110
Query: 443 TSLSWIMRVQIALD---------AARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKIS 493
L+ I++ Q D RGL+YIH +HRD+K SN+ ++ KI
Sbjct: 111 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 494 DFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISGK 551
D GLA + +D E +T V T Y APE + + + ++ D+++ G ++ E+++G+
Sbjct: 168 DGGLA----RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 36/225 (16%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKI 396
D + + + +G G G V Y + ++ VAIK+++ T K E+ +
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD 456
+ V+H N++ L+ + L E Q L L D N Q +Q+ LD
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMD-ANLCQV-------IQMELD 124
Query: 457 AAR----------GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD 506
R G++++H +HRD+K SNI++ S KI DFGLA+ G +
Sbjct: 125 HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 179
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+T V T Y APE + D+++ G ++ E++ K
Sbjct: 180 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 36/225 (16%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKI 396
D + + + +G G G V Y + ++ VAIK+++ T K E+ +
Sbjct: 11 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 70
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD 456
+ V+H N++ L+ + L E Q L L D N Q +Q+ LD
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMD-ANLCQV-------IQMELD 118
Query: 457 AAR----------GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD 506
R G++++H +HRD+K SNI++ S KI DFGLA+ G +
Sbjct: 119 HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 173
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+T V T Y APE + D+++ G ++ E++ K
Sbjct: 174 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 36/225 (16%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKI 396
D + + + +G G G V Y + ++ VAIK+++ T K E+ +
Sbjct: 55 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 114
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD 456
+ V+H N++ L+ + L E Q L L D N Q +Q+ LD
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMD-ANLCQV-------IQMELD 162
Query: 457 AAR----------GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD 506
R G++++H +HRD+K SNI++ S KI DFGLA+ G +
Sbjct: 163 HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 217
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+T V T Y APE + D+++ G ++ E++ K
Sbjct: 218 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 36/225 (16%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKI 396
D + + + +G G G V Y + ++ VAIK+++ T K E+ +
Sbjct: 16 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 75
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD 456
+ V+H N++ L+ + L E Q L L D N Q +Q+ LD
Sbjct: 76 MKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMD-ANLCQV-------IQMELD 123
Query: 457 AAR----------GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD 506
R G++++H +HRD+K SNI++ S KI DFGLA+ G +
Sbjct: 124 HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 178
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+T V T Y APE + D+++ G ++ E++ K
Sbjct: 179 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 91/228 (39%), Gaps = 25/228 (10%)
Query: 348 FATEGFSDSSLLGHGTYGSVYYGNIRNQE----VAIKRMTATKTKEFMAEMKILCKVHHS 403
F + F S LGHG+YG V+ +R++E A+KR + F K+
Sbjct: 54 FFQQSFQRLSRLGHGSYGEVF--KVRSKEDGRLYAVKRSMSP----FRGPKDRARKLAEV 107
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIA------LDA 457
E +G L +E L++ L P + Q +W + A D
Sbjct: 108 GSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQ-QHCEAWGASLPEAQVWGYLRDT 166
Query: 458 ARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGT 517
L ++H VH D+K +NI L R K+ DFGL +G GE G
Sbjct: 167 LLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ----EGD 219
Query: 518 FGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQ 565
Y+APE L TA +DV++ G+ + E+ E EG Q
Sbjct: 220 PRYMAPELLQGSYGTA-ADVFSLGLTILEVACNMELPHGGEGWQQLRQ 266
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 36/225 (16%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKI 396
D + + + +G G G V Y + ++ VAIK+++ T K E+ +
Sbjct: 17 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD 456
+ V+H N++ L+ + L E Q L L D N Q +Q+ LD
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMD-ANLCQV-------IQMELD 124
Query: 457 AAR----------GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD 506
R G++++H +HRD+K SNI++ S KI DFGLA+ G +
Sbjct: 125 HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 179
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+T V T Y APE + D+++ G ++ E++ K
Sbjct: 180 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 36/209 (17%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G G V Y I + VAIK+++ T K E+ ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----------GL 461
+ L E Q + L D N Q +Q+ LD R G+
Sbjct: 92 FTPQKSL----EEFQDVYIVMELMD-ANLCQV-------IQMELDHERMSYLLYQMLCGI 139
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H +HRD+K SNI++ S KI DFGLA+ G + +T V T Y
Sbjct: 140 KHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----FMMTPYVVTRYYR 192
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISG 550
APE + D+++ G ++ E+I G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 36/225 (16%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKI 396
D + + + +G G G V Y + ++ VAIK+++ T K E+ +
Sbjct: 18 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 77
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD 456
+ V+H N++ L+ + L E Q L L D N Q +Q+ LD
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMD-ANLCQV-------IQMELD 125
Query: 457 AAR----------GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD 506
R G++++H +HRD+K SNI++ S KI DFGLA+ G +
Sbjct: 126 HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 180
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+T V T Y APE + D+++ G ++ E++ K
Sbjct: 181 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 30/225 (13%)
Query: 337 KPVVFTY-DEILFATEGFSDSSLLGHGTYGSVYYGNIRNQ--EVAIKRMTATKTKEFMAE 393
KPV + Y +E+ +AT LG G++G V+ + + A+K++ + + F AE
Sbjct: 82 KPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKV---RLEVFRAE 134
Query: 394 MKILCK-VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWI 448
+ C + +V L G + + E + GSL + + P++R L
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG-- 192
Query: 449 MRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDS-AFRAKISDFGLAKLVGKTSDG 507
A GLEY+H +H D+K+ N+LL S A + DFG A + G
Sbjct: 193 -------QALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLG 242
Query: 508 EATVTK--VVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
++ +T + GT ++APE + AK DV++ ++ +++G
Sbjct: 243 KSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 19/199 (9%)
Query: 359 LGHGTYG--SVYYGNIRNQEVAIKRMTATKTKEFMAEMKILC--KVHHSNLVELIGYAAT 414
+G G +G + + + VA+K + + + +I+ + H N+V T
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
L +I EYA G L + + + + + ++ G+ Y H H
Sbjct: 88 PTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS-----GVSYCH---SMQICH 139
Query: 475 RDIKSSNILLDS--AFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLAT 532
RD+K N LLD A R KI DFG +K S ++T VGT Y+APE L
Sbjct: 140 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST----VGTPAYIAPEVLLRQEYD 195
Query: 533 AK-SDVYAFGVVLFEIISG 550
K +DV++ GV L+ ++ G
Sbjct: 196 GKIADVWSCGVTLYVMLVG 214
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 17/162 (10%)
Query: 393 EMKILCKVHHSNLVELIGYAATED--ELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMR 450
E+ I+ ++HH L+ L + A ED E+ LI E+ G L D +S
Sbjct: 98 EISIMNQLHHPKLINL--HDAFEDKYEMVLILEFLSGGEL----FDRIAAEDYKMSEAEV 151
Query: 451 VQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDS--AFRAKISDFGLAKLVGKTSDGE 508
+ A GL+++HEH+ VH DIK NI+ ++ A KI DFGLA + D
Sbjct: 152 INYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKL--NPDEI 206
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
VT F APE + +D++A GV+ + ++SG
Sbjct: 207 VKVTTATAEFA--APEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 377 VAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD 436
+ K+++A ++ E +I + H N+V L + E +LI++ G L +
Sbjct: 44 INTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA 103
Query: 437 PQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRA---KIS 493
+ + S +Q L+A +H H + VHR++K N+LL S + K++
Sbjct: 104 REYYSEADASHC--IQQILEAV-----LHCH-QMGVVHRNLKPENLLLASKLKGAAVKLA 155
Query: 494 DFGLAKLVGKTSDGEATVT-KVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
DFGLA V +GE GT GYL+PE L D++A GV+L+ ++ G
Sbjct: 156 DFGLAIEV----EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 358 LLGHGTYGSVYY-GNIRNQEVAIKRMTATKTKEFMAEMKILCKVH-HSNLVELIGYAATE 415
+LG+G+ G+V + G+ + + VA+KRM + E+K+L + H N++ T+
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTD 81
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMR---VQIALDAARGLEYIHEHTKTHY 472
L++ E L + +N +L + + A G+ ++H
Sbjct: 82 RFLYIALELCNLNL--QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKI 136
Query: 473 VHRDIKSSNILLDSA-------------FRAKISDFGL-AKLVGKTSDGEATVTKVVGTF 518
+HRD+K NIL+ ++ R ISDFGL KL S + GT
Sbjct: 137 IHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTS 196
Query: 519 GYLAPEYL--TDGLATAKS-----DVYAFGVVLFEIIS 549
G+ APE L ++ L T + D+++ G V + I+S
Sbjct: 197 GWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 474 HRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEAT-VTKVVGTFGYLAPEYLTDGLAT 532
HRD+K NIL+ + A + DFG+A T+D + T + VGT Y APE ++ AT
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIAS---ATTDEKLTQLGNTVGTLYYXAPERFSESHAT 213
Query: 533 AKSDVYAFGVVLFEIISG 550
++D+YA VL+E ++G
Sbjct: 214 YRADIYALTCVLYECLTG 231
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 27/203 (13%)
Query: 359 LGHGTYG--SVYYGNIRNQEVAIK------RMTATKTKEFMAEMKILCKVHHSNLVELIG 410
+G G +G + N+ VA+K ++ A +E + + H N+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSL----RHPNIVRFKE 82
Query: 411 YAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKT 470
T L ++ EYA G L + + + + + I+ G+ Y H
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSYCH---AM 134
Query: 471 HYVHRDIKSSNILLDS--AFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTD 528
HRD+K N LLD A R KI DFG +K S ++T VGT Y+APE L
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST----VGTPAYIAPEVLLK 190
Query: 529 GLATAK-SDVYAFGVVLFEIISG 550
K +DV++ GV L+ ++ G
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 19/199 (9%)
Query: 359 LGHGTYG--SVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCK--VHHSNLVELIGYAAT 414
+G G +G + N+ VA+K + + + + +I+ + H N+V T
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
L ++ EYA G L + + + + + I+ G+ Y H H
Sbjct: 86 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSYCH---AMQVCH 137
Query: 475 RDIKSSNILLDS--AFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLAT 532
RD+K N LLD A R KI DFG +K S ++T VGT Y+APE L
Sbjct: 138 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST----VGTPAYIAPEVLLKKEYD 193
Query: 533 AK-SDVYAFGVVLFEIISG 550
K +DV++ GV L+ ++ G
Sbjct: 194 GKVADVWSCGVTLYVMLVG 212
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 36/209 (17%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G G V Y I + VAIK+++ T K E+ ++ V+H N++ L+
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----------GL 461
+ L E Q + L D N Q +Q+ LD R G+
Sbjct: 94 FTPQKSL----EEFQDVYIVMELMD-ANLCQV-------IQMELDHERMSYLLYQMLCGI 141
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H +HRD+K SNI++ S KI DFGLA+ G + + V T Y
Sbjct: 142 KHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----FMMVPFVVTRYYR 194
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISG 550
APE + D+++ G ++ E+I G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 337 KPVVFTY-DEILFATEGFSDSSLLGHGTYGSVYYGNIRNQ--EVAIKRMTATKTKEFMAE 393
KPV + Y +E+ +AT LG G++G V+ + + A+K++ + + F AE
Sbjct: 63 KPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKV---RLEVFRAE 115
Query: 394 MKILCK-VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWI 448
+ C + +V L G + + E + GSL + + P++R L
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG-- 173
Query: 449 MRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDS-AFRAKISDFGLAKLVGKTSDG 507
A GLEY+H +H D+K+ N+LL S A + DFG A + G
Sbjct: 174 -------QALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLG 223
Query: 508 EATVTK--VVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ +T + GT ++APE + AK DV++ ++ +++G
Sbjct: 224 KDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 19/199 (9%)
Query: 359 LGHGTYG--SVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCK--VHHSNLVELIGYAAT 414
+G G +G + N+ VA+K + + + + +I+ + H N+V T
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
L ++ EYA G L + + + + + I+ G+ Y H H
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSYAH---AMQVAH 138
Query: 475 RDIKSSNILLDS--AFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLAT 532
RD+K N LLD A R KI+DFG + K S + VGT Y+APE L
Sbjct: 139 RDLKLENTLLDGSPAPRLKIADFGYS----KASVLHSQPKSAVGTPAYIAPEVLLKKEYD 194
Query: 533 AK-SDVYAFGVVLFEIISG 550
K +DV++ GV L+ ++ G
Sbjct: 195 GKVADVWSCGVTLYVMLVG 213
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 337 KPVVFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIK-RMTATKTKEFMAEMK 395
KPV + Y E + LG G++G V+ +++++ + + + + F E
Sbjct: 61 KPVDYEYRE---EVHWMTHQPRLGRGSFGEVH--RMKDKQTGFQCAVKKVRLEVFRVEEL 115
Query: 396 ILCK-VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMR 450
+ C + +V L G + + E + GSL + P++R L
Sbjct: 116 VACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG---- 171
Query: 451 VQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDS-AFRAKISDFGLAKLVGKTSDGEA 509
A GLEY+H +H D+K+ N+LL S RA + DFG A + G++
Sbjct: 172 -----QALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 223
Query: 510 TVTK--VVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+T + GT ++APE + AK D+++ ++ +++G
Sbjct: 224 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 18/189 (9%)
Query: 365 GSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEY 424
G Y I N K+++A ++ E +I + H N+V L + E +L+++
Sbjct: 29 GQEYAAKIIN----TKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDL 84
Query: 425 AQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILL 484
G L + + + S ++ QI LE ++ VHRD+K N+LL
Sbjct: 85 VTGGELFEDIVAREYYSEADASHCIQ-QI-------LESVNHCHLNGIVHRDLKPENLLL 136
Query: 485 DSAFRA---KISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFG 541
S + K++DFGLA + D +A GT GYL+PE L D++A G
Sbjct: 137 ASKSKGAAVKLADFGLA--IEVQGDQQAWFG-FAGTPGYLSPEVLRKDPYGKPVDMWACG 193
Query: 542 VVLFEIISG 550
V+L+ ++ G
Sbjct: 194 VILYILLVG 202
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 18/189 (9%)
Query: 365 GSVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEY 424
G Y I N K+++A ++ E +I + H N+V L + E +L+++
Sbjct: 29 GQEYAAKIIN----TKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDL 84
Query: 425 AQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILL 484
G L + + + S ++ QI LE ++ VHRD+K N+LL
Sbjct: 85 VTGGELFEDIVAREYYSEADASHCIQ-QI-------LESVNHCHLNGIVHRDLKPENLLL 136
Query: 485 DSAFRA---KISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFG 541
S + K++DFGLA + D +A GT GYL+PE L D++A G
Sbjct: 137 ASKSKGAAVKLADFGLA--IEVQGDQQAWFG-FAGTPGYLSPEVLRKDPYGKPVDMWACG 193
Query: 542 VVLFEIISG 550
V+L+ ++ G
Sbjct: 194 VILYILLVG 202
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 451 VQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEAT 510
+ I + A +E++H +HRD+K SNI K+ DFGL + + + +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 511 VTKV---------VGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEII 548
+T + VGT Y++PE + + K D+++ G++LFE++
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G G V Y I + VAIK+++ T K E+ ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----------GL 461
+ L E Q + L D N Q +Q+ LD R G+
Sbjct: 92 FTPQKSL----EEFQDVYIVMELMD-ANLCQV-------IQMELDHERMSYLLYQMLCGI 139
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H +HRD+K SNI++ S KI DFGLA+ G + E V T Y
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV----TRYYR 192
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGK 551
APE + D+++ G ++ E++ K
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 115/271 (42%), Gaps = 44/271 (16%)
Query: 335 MEKPVVFTYDEILFATEG-----FSDSSLLGHGTYGSVYYG--NIRNQEVAIKRMTATKT 387
+E+P E L A EG +S S LG G +G V+ +N+EV +K + K
Sbjct: 3 LEEPPKAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKV 62
Query: 388 KE-----------FMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD 436
E E+ IL +V H+N+++++ + L+ E G D
Sbjct: 63 LEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFID 122
Query: 437 PQNRGQTSL-SWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDF 495
R L S+I R ++ L+ I +HRDIK NI++ F K+ DF
Sbjct: 123 RHPRLDEPLASYIFRQLVSAVGYLRLKDI--------IHRDIKDENIVIAEDFTIKLIDF 174
Query: 496 GLAKLVGKTSDGEATVTKVVGTFGYLAPEYLT-DGLATAKSDVYAFGVVLFEIISGK--- 551
G A + + G+ T GT Y APE L + + ++++ GV L+ ++ +
Sbjct: 175 GSAAYLER---GKLFYT-FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
Query: 552 -------EAIIRTEGMVSKNQERRSLASFML 575
EA I +VSK E SL S +L
Sbjct: 231 CELEETVEAAIHPPYLVSK--ELMSLVSGLL 259
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 27/214 (12%)
Query: 358 LLGHGTYGSV-YYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVH-HSNLVELIGYAATE 415
+LG+G+ G+V + G+ + + VA+KRM + E+K+L + H N++ T+
Sbjct: 40 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTD 99
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMR---VQIALDAARGLEYIHEHTKTHY 472
L++ E L + +N +L + + A G+ ++H
Sbjct: 100 RFLYIALELCNLNL--QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKI 154
Query: 473 VHRDIKSSNILLDSA-------------FRAKISDFGL-AKLVGKTSDGEATVTKVVGTF 518
+HRD+K NIL+ ++ R ISDFGL KL + GT
Sbjct: 155 IHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTS 214
Query: 519 GYLAPEYL---TDGLATAKSDVYAFGVVLFEIIS 549
G+ APE L T T D+++ G V + I+S
Sbjct: 215 GWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 36/225 (16%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKI 396
D + + + +G G G V Y I + VAIK+++ T K E+ +
Sbjct: 22 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 81
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD 456
+ V+H N++ L+ + L E Q + L D N Q +Q+ LD
Sbjct: 82 MKCVNHKNIIGLLNVFTPQKSL----EEFQDVYIVMELMD-ANLCQV-------IQMELD 129
Query: 457 AAR----------GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD 506
R G++++H +HRD+K SNI++ S KI DFGLA+ G +
Sbjct: 130 HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 184
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+T V T Y APE + D+++ G ++ E++ K
Sbjct: 185 --FMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 36/225 (16%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKI 396
D + + + +G G G V Y I + VAIK+++ T K E+ +
Sbjct: 11 DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 70
Query: 397 LCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALD 456
+ V+H N++ L+ + L E Q + L D N Q +Q+ LD
Sbjct: 71 MKCVNHKNIIGLLNVFTPQKSL----EEFQDVYIVMELMD-ANLCQV-------IQMELD 118
Query: 457 AAR----------GLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD 506
R G++++H +HRD+K SNI++ S KI DFGLA+ G +
Sbjct: 119 HERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 173
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISGK 551
+T V T Y APE + D+++ G ++ E++ K
Sbjct: 174 --FMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 27/214 (12%)
Query: 358 LLGHGTYGSV-YYGNIRNQEVAIKRMTATKTKEFMAEMKILCKVH-HSNLVELIGYAATE 415
+LG+G+ G+V + G+ + + VA+KRM + E+K+L + H N++ T+
Sbjct: 40 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTD 99
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMR---VQIALDAARGLEYIHEHTKTHY 472
L++ E L + +N +L + + A G+ ++H
Sbjct: 100 RFLYIALELCNLNL--QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKI 154
Query: 473 VHRDIKSSNILLDSA-------------FRAKISDFGL-AKLVGKTSDGEATVTKVVGTF 518
+HRD+K NIL+ ++ R ISDFGL KL + GT
Sbjct: 155 IHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTS 214
Query: 519 GYLAPEYL---TDGLATAKSDVYAFGVVLFEIIS 549
G+ APE L T T D+++ G V + I+S
Sbjct: 215 GWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 46/229 (20%)
Query: 358 LLGHGTYGSV--YYGNIRNQEVAIKRMTAT-----KTKEFMAEMKILCKVHHSNLVELIG 410
L+G G+YG V Y + + VAIK++ K + E+ IL +++H ++V+++
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLD 119
Query: 411 YAATED-----ELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
+D EL+++ E A K R L+ + + + G++Y+H
Sbjct: 120 IVIPKDVEKFDELYVVLEIADSDFKKLF------RTPVYLTELHIKTLLYNLLVGVKYVH 173
Query: 466 EHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEA---------------- 509
+HRD+K +N L++ K+ DFGLA+ V +G +
Sbjct: 174 ---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTF 230
Query: 510 --------TVTKVVGTFGYLAPEY-LTDGLATAKSDVYAFGVVLFEIIS 549
+T V T Y APE L T DV++ G + E+++
Sbjct: 231 PHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 31/218 (14%)
Query: 358 LLGHGTYGSVYY-GNIRNQEVAIKRMTATKTKEFMAEMKILCKVH-HSNLVELIGYAATE 415
+LG+G+ G+V + G+ + + VA+KRM + E+K+L + H N++ T+
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTD 81
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMR---VQIALDAARGLEYIHEHTKTHY 472
L++ E L + +N +L + + A G+ ++H
Sbjct: 82 RFLYIALELCNLNL--QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKI 136
Query: 473 VHRDIKSSNILLDSA-------------FRAKISDFGL-AKLVGKTSDGEATVTKVVGTF 518
+HRD+K NIL+ ++ R ISDFGL KL + GT
Sbjct: 137 IHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTS 196
Query: 519 GYLAPEYL--TDGLATAKS-----DVYAFGVVLFEIIS 549
G+ APE L ++ L T + D+++ G V + I+S
Sbjct: 197 GWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 36/209 (17%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G G V + + VA+K+++ T K E+ +L V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----------GL 461
+ L E Q L L D N Q + + LD R G+
Sbjct: 92 FTPQKTL----EEFQDVYLVMELMD-ANLCQV-------IHMELDHERMSYLLYQMLCGI 139
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H +HRD+K SNI++ S KI DFGLA +T+ +T V T Y
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTACTNFMMTPYVVTRYYR 192
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISG 550
APE + A D+++ G ++ E++ G
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G G V Y I + VAIK+++ T K E+ ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----------GL 461
+ L E Q + L D N Q +Q+ LD R G+
Sbjct: 92 FTPQKSL----EEFQDVYIVMELMD-ANLCQV-------IQMELDHERMSYLLYQMLCGI 139
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H +HRD+K SNI++ S KI DFGLA+ G + E V T Y
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV----TRYYR 192
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISGK 551
APE + D+++ G ++ E++ K
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 337 KPVVFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIK-RMTATKTKEFMAEMK 395
KPV + Y E + +G G++G V+ +++++ + + + + F E
Sbjct: 47 KPVDYEYRE---EVHWMTHQPRVGRGSFGEVH--RMKDKQTGFQCAVKKVRLEVFRVEEL 101
Query: 396 ILCK-VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMR 450
+ C + +V L G + + E + GSL + P++R L
Sbjct: 102 VACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG---- 157
Query: 451 VQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDS-AFRAKISDFGLAKLVGKTSDGEA 509
A GLEY+H +H D+K+ N+LL S RA + DFG A + G++
Sbjct: 158 -----QALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209
Query: 510 TVTK--VVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+T + GT ++APE + AK D+++ ++ +++G
Sbjct: 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 29/231 (12%)
Query: 353 FSDSSLLGHGTYGSVYYGNIRN--QEVAIKRMTAT---KTKEFMAEMKILCKVHHSNLVE 407
F + G GT+G+V G ++ VAIK++ + +E M+ L +HH N+V+
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQ 83
Query: 408 LIGYAATEDE-------LFLIYEYAQKGSLKSHLH---DPQNRGQTSLSWIMRVQIALDA 457
L Y T E L ++ EY + LH R Q + I+
Sbjct: 84 LQSYFYTLGERDRRDIYLNVVMEY-----VPDTLHRCCRNYYRRQVAPPPILIKVFLFQL 138
Query: 458 ARGLEYIHEHTKTHYVHRDIKSSNILLDSA-FRAKISDFGLAKLVGKTSDGEATVTKVVG 516
R + +H + + HRDIK N+L++ A K+ DFG AK K S E V +
Sbjct: 139 IRSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAK---KLSPSEPNVAYICS 194
Query: 517 TFGYLAPEYL-TDGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQE 566
+ Y APE + + T D+++ G + E++ G E I R + + E
Sbjct: 195 RY-YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG-EPIFRGDNSAGQLHE 243
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 337 KPVVFTYDEILFATEGFSDSSLLGHGTYGSVYYGNIRNQEVAIK-RMTATKTKEFMAEMK 395
KPV + Y E + +G G++G V+ +++++ + + + + F E
Sbjct: 63 KPVDYEYRE---EVHWMTHQPRVGRGSFGEVH--RMKDKQTGFQCAVKKVRLEVFRVEEL 117
Query: 396 ILCK-VHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHD----PQNRGQTSLSWIMR 450
+ C + +V L G + + E + GSL + P++R L
Sbjct: 118 VACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG---- 173
Query: 451 VQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDS-AFRAKISDFGLAKLVGKTSDGEA 509
A GLEY+H +H D+K+ N+LL S RA + DFG A + G++
Sbjct: 174 -----QALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 225
Query: 510 TVTK--VVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+T + GT ++APE + AK D+++ ++ +++G
Sbjct: 226 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 19/199 (9%)
Query: 359 LGHGTYG--SVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCK--VHHSNLVELIGYAAT 414
+G G +G + N+ VA+K + + + + +I+ + H N+V T
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
L ++ EYA G L + + + + + I+ G+ Y H H
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSYCH---AMQVCH 138
Query: 475 RDIKSSNILLDS--AFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLAT 532
RD+K N LLD A R KI FG +K S ++T VGT Y+APE L
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST----VGTPAYIAPEVLLKKEYD 194
Query: 533 AK-SDVYAFGVVLFEIISG 550
K +DV++ GV L+ ++ G
Sbjct: 195 GKVADVWSCGVTLYVMLVG 213
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 28/194 (14%)
Query: 378 AIKRMTATKTK---EFMAEMKILCKVHHSNLVELIGYAATE----DELFLIYEYAQKGSL 430
A+KR+ + + E E + +H N++ L+ Y E E +L+ + ++G+L
Sbjct: 58 ALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTL 117
Query: 431 KSHLHDPQNRG----QTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDS 486
+ + +++G + + W++ L RGLE IH Y HRD+K +NILL
Sbjct: 118 WNEIERLKDKGNFLTEDQILWLL-----LGICRGLEAIH---AKGYAHRDLKPTNILLGD 169
Query: 487 AFRAKISDFGLAKLVGKTSDGEATVTKVVG------TFGYLAPEYL---TDGLATAKSDV 537
+ + D G +G + T Y APE + + ++DV
Sbjct: 170 EGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDV 229
Query: 538 YAFGVVLFEIISGK 551
++ G VL+ ++ G+
Sbjct: 230 WSLGCVLYAMMFGE 243
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 15/155 (9%)
Query: 418 LFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDI 477
L +I E + G L S + Q RG + + +I D ++++H H + HRD+
Sbjct: 101 LLIIMECMEGGELFSRI---QERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDV 154
Query: 478 KSSNILLDSAFR---AKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
K N+L S + K++DFG AK + + T Y+APE L
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-----YVAPEVLGPEKYDKS 209
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGM-VSKNQERR 568
D+++ GV+++ ++ G G +S +RR
Sbjct: 210 CDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR 244
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 105/224 (46%), Gaps = 29/224 (12%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIRN--QEVAIKRMTATK--------TKEFMAE 393
D++LF + + ++G G + V R Q+ A+K + K T++ E
Sbjct: 20 DDVLF-EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKRE 78
Query: 394 MKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRG----QTSLSWIM 449
I + H ++VEL+ +++ L++++E+ L + + G + S M
Sbjct: 79 ASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYM 138
Query: 450 RVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILL---DSAFRAKISDFGLAKLVGKTSD 506
R QI L+A R Y H+ + +HRD+K +LL +++ K+ FG+A +G++
Sbjct: 139 R-QI-LEALR---YCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG- 189
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
VGT ++APE + DV+ GV+LF ++SG
Sbjct: 190 --LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 105/224 (46%), Gaps = 29/224 (12%)
Query: 344 DEILFATEGFSDSSLLGHGTYGSVYYGNIRN--QEVAIKRMTATK--------TKEFMAE 393
D++LF + + ++G G + V R Q+ A+K + K T++ E
Sbjct: 18 DDVLF-EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKRE 76
Query: 394 MKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRG----QTSLSWIM 449
I + H ++VEL+ +++ L++++E+ L + + G + S M
Sbjct: 77 ASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYM 136
Query: 450 RVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILL---DSAFRAKISDFGLAKLVGKTSD 506
R QI L+A R Y H+ + +HRD+K +LL +++ K+ FG+A +G++
Sbjct: 137 R-QI-LEALR---YCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG- 187
Query: 507 GEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
VGT ++APE + DV+ GV+LF ++SG
Sbjct: 188 --LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 15/155 (9%)
Query: 418 LFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDI 477
L +I E + G L S + Q RG + + +I D ++++H H + HRD+
Sbjct: 82 LLIIMECMEGGELFSRI---QERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDV 135
Query: 478 KSSNILLDSAFR---AKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAK 534
K N+L S + K++DFG AK + + T Y+APE L
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-----YVAPEVLGPEKYDKS 190
Query: 535 SDVYAFGVVLFEIISGKEAIIRTEGM-VSKNQERR 568
D+++ GV+++ ++ G G +S +RR
Sbjct: 191 CDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR 225
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 19/199 (9%)
Query: 359 LGHGTYG--SVYYGNIRNQEVAIKRMTATKTKEFMAEMKILCK--VHHSNLVELIGYAAT 414
+G G +G + N+ VA+K + + + + +I+ + H N+V T
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 415 EDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVH 474
L ++ EYA G L + + + + + I+ G+ Y H H
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSYCH---AMQVCH 138
Query: 475 RDIKSSNILLDS--AFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLAT 532
RD+K N LLD A R KI FG + K+S + VGT Y+APE L
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYS----KSSVLHSQPKDTVGTPAYIAPEVLLKKEYD 194
Query: 533 AK-SDVYAFGVVLFEIISG 550
K +DV++ GV L+ ++ G
Sbjct: 195 GKVADVWSCGVTLYVMLVG 213
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 119/280 (42%), Gaps = 65/280 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 30 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 88
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 89 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 138
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 139 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 185
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTEGMVSKN 564
T GT Y PE++ +S V++ G++L++++ G E IIR G V
Sbjct: 186 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR--GQVFFR 243
Query: 565 QERRSLASFMLA---ALRNSPDSMSMSSLKDYIDPNMMDL 601
Q S ++ ALR S D + ++++ P M D+
Sbjct: 244 QRVSSECQHLIRWCLALRPS-DRPTFEEIQNH--PWMQDV 280
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 119/280 (42%), Gaps = 65/280 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 31 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 89
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 139
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 140 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 186
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTEGMVSKN 564
T GT Y PE++ +S V++ G++L++++ G E IIR G V
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR--GQVFFR 244
Query: 565 QERRSLASFMLA---ALRNSPDSMSMSSLKDYIDPNMMDL 601
Q S ++ ALR S D + ++++ P M D+
Sbjct: 245 QRVSSECQHLIRWCLALRPS-DRPTFEEIQNH--PWMQDV 281
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 31 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 89
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 139
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 140 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 186
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTEGMVSK- 563
T GT Y PE++ +S V++ G++L++++ G E IIR + +
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 246
Query: 564 -NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDL 601
+ E + L + L ALR S D + ++++ P M D+
Sbjct: 247 VSXECQHLIRWCL-ALRPS-DRPTFEEIQNH--PWMQDV 281
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 36/209 (17%)
Query: 359 LGHGTYGSV--YYGNIRNQEVAIKRMT-----ATKTKEFMAEMKILCKVHHSNLVELIGY 411
+G G G V + + VA+K+++ T K E+ +L V+H N++ L+
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR----------GL 461
+ L E Q L L D N Q + + LD R G+
Sbjct: 90 FTPQKTL----EEFQDVYLVMELMD-ANLCQV-------IHMELDHERMSYLLYQMLCGI 137
Query: 462 EYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
+++H +HRD+K SNI++ S KI DFGLA +T+ +T V T Y
Sbjct: 138 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTASTNFMMTPYVVTRYYR 190
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISG 550
APE + D+++ G ++ E++ G
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 119/280 (42%), Gaps = 65/280 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 50 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 108
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 109 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 158
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 159 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 205
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTEGMVSKN 564
T GT Y PE++ +S V++ G++L++++ G E IIR G V
Sbjct: 206 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR--GQVFFR 263
Query: 565 QERRSLASFMLA---ALRNSPDSMSMSSLKDYIDPNMMDL 601
Q S ++ ALR S D + ++++ P M D+
Sbjct: 264 QRVSSECQHLIRWCLALRPS-DRPTFEEIQNH--PWMQDV 300
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 30 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 88
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 89 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 138
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 139 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 185
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTEGMVSK- 563
T GT Y PE++ +S V++ G++L++++ G E IIR + +
Sbjct: 186 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 245
Query: 564 -NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDL 601
+ E + L + L ALR S D + ++++ P M D+
Sbjct: 246 VSXECQHLIRWCL-ALRPS-DRPTFEEIQNH--PWMQDV 280
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 119/280 (42%), Gaps = 65/280 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 15 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 73
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 74 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 123
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 124 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 170
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTEGMVSKN 564
T GT Y PE++ +S V++ G++L++++ G E IIR G V
Sbjct: 171 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR--GQVFFR 228
Query: 565 QERRSLASFMLA---ALRNSPDSMSMSSLKDYIDPNMMDL 601
Q S ++ ALR S D + ++++ P M D+
Sbjct: 229 QRVSSECQHLIRWCLALRPS-DRPTFEEIQNH--PWMQDV 265
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 11 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 119
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 120 --LEAVR-----HCHNXG-VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 166
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTEGMVSK- 563
T GT Y PE++ +S V++ G++L++++ G E IIR + +
Sbjct: 167 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 226
Query: 564 -NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDL 601
+ E + L + L ALR S D + ++++ P M D+
Sbjct: 227 VSXECQHLIRWCL-ALRPS-DRPTFEEIQNH--PWMQDV 261
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 119/280 (42%), Gaps = 65/280 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 16 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 74
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 124
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 125 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 171
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTEGMVSKN 564
T GT Y PE++ +S V++ G++L++++ G E IIR G V
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR--GQVFFR 229
Query: 565 QERRSLASFMLA---ALRNSPDSMSMSSLKDYIDPNMMDL 601
Q S ++ ALR S D + ++++ P M D+
Sbjct: 230 QRVSSECQHLIRWCLALRPS-DRPTFEEIQNH--PWMQDV 266
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 119/280 (42%), Gaps = 65/280 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 15 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 73
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 74 GVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 123
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 124 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 170
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTEGMVSKN 564
T GT Y PE++ +S V++ G++L++++ G E IIR G V
Sbjct: 171 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR--GQVFFR 228
Query: 565 QERRSLASFMLA---ALRNSPDSMSMSSLKDYIDPNMMDL 601
Q S ++ ALR S D + ++++ P M D+
Sbjct: 229 QRVSSECQHLIRWCLALRPS-DRPTFEEIQNH--PWMQDV 265
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 30/214 (14%)
Query: 358 LLGHGTYGSVYYGNI--RNQEVAIKRMTATKTKEFMAEMKILCKVH----HSNLVELIGY 411
+L G + VY +E A+KR+ + + ++ A ++ +C + H N+V+
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 412 AATEDEL-------FLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYI 464
A+ E FL+ KG L L ++RG S +++ I R ++++
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLK--IFYQTCRAVQHM 152
Query: 465 HEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTSD----------GEATVTKV 514
H K +HRD+K N+LL + K+ DFG A + D E +T+
Sbjct: 153 HRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRN 211
Query: 515 VGTFGYLAPEYL---TDGLATAKSDVYAFGVVLF 545
T Y PE + ++ K D++A G +L+
Sbjct: 212 T-TPMYRTPEIIDLYSNFPIGEKQDIWALGCILY 244
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 119/280 (42%), Gaps = 65/280 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 14 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 72
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 73 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 122
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 123 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 169
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTEGMVSKN 564
T GT Y PE++ +S V++ G++L++++ G E IIR G V
Sbjct: 170 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR--GQVFFR 227
Query: 565 QERRSLASFMLA---ALRNSPDSMSMSSLKDYIDPNMMDL 601
Q S ++ ALR S D + ++++ P M D+
Sbjct: 228 QRVSSECQHLIRWCLALRPS-DRPTFEEIQNH--PWMQDV 264
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 119/280 (42%), Gaps = 65/280 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 11 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 119
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 120 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 166
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTEGMVSKN 564
T GT Y PE++ +S V++ G++L++++ G E IIR G V
Sbjct: 167 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR--GQVFFR 224
Query: 565 QERRSLASFMLA---ALRNSPDSMSMSSLKDYIDPNMMDL 601
Q S ++ ALR S D + ++++ P M D+
Sbjct: 225 QRVSSECQHLIRWCLALRPS-DRPTFEEIQNH--PWMQDV 261
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 119/280 (42%), Gaps = 65/280 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 16 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 74
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 124
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 125 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 171
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTEGMVSKN 564
T GT Y PE++ +S V++ G++L++++ G E IIR G V
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR--GQVFFR 229
Query: 565 QERRSLASFMLA---ALRNSPDSMSMSSLKDYIDPNMMDL 601
Q S ++ ALR S D + ++++ P M D+
Sbjct: 230 QRVSSECQHLIRWCLALRPS-DRPTFEEIQNH--PWMQDV 266
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 119/280 (42%), Gaps = 65/280 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 43 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 101
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 151
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 152 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 198
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTEGMVSKN 564
T GT Y PE++ +S V++ G++L++++ G E IIR G V
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR--GQVFFR 256
Query: 565 QERRSLASFMLA---ALRNSPDSMSMSSLKDYIDPNMMDL 601
Q S ++ ALR S D + ++++ P M D+
Sbjct: 257 QRVSSECQHLIRWCLALRPS-DRPTFEEIQNH--PWMQDV 293
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 38 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 96
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 97 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 146
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 147 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 193
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTEGMVSK- 563
T GT Y PE++ +S V++ G++L++++ G E IIR + +
Sbjct: 194 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 253
Query: 564 -NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDL 601
+ E + L + L ALR S D + ++++ P M D+
Sbjct: 254 VSXECQHLIRWCL-ALRPS-DRPTFEEIQNH--PWMQDV 288
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 119/280 (42%), Gaps = 65/280 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 16 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 74
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 124
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 125 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 171
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTEGMVSKN 564
T GT Y PE++ +S V++ G++L++++ G E IIR G V
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR--GQVFFR 229
Query: 565 QERRSLASFMLA---ALRNSPDSMSMSSLKDYIDPNMMDL 601
Q S ++ ALR S D + ++++ P M D+
Sbjct: 230 QRVSSECQHLIRWCLALRPS-DRPTFEEIQNH--PWMQDV 266
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 119/280 (42%), Gaps = 65/280 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 58 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 116
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 166
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 167 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 213
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTEGMVSKN 564
T GT Y PE++ +S V++ G++L++++ G E IIR G V
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR--GQVFFR 271
Query: 565 QERRSLASFMLA---ALRNSPDSMSMSSLKDYIDPNMMDL 601
Q S ++ ALR S D + ++++ P M D+
Sbjct: 272 QRVSSECQHLIRWCLALRPS-DRPTFEEIQNH--PWMQDV 308
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 89/179 (49%), Gaps = 20/179 (11%)
Query: 380 KRMTATKT----KEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLH 435
+R+++++ +E E+ IL ++ H N++ L + ++ LI E G L L
Sbjct: 41 RRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA 100
Query: 436 DPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAK 491
+ ++ + + ++ QI LD G+ Y+H H+ D+K NI LLD R K
Sbjct: 101 EKESLTEDEATQFLK-QI-LD---GVHYLHSKRIAHF---DLKPENIMLLDKNVPNPRIK 152
Query: 492 ISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ DFG+A + ++ + GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 153 LIDFGIAHKIEAGNE----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 63 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 121
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 122 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 171
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 172 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 218
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTEGMVSK- 563
T GT Y PE++ +S V++ G++L++++ G E IIR + +
Sbjct: 219 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 278
Query: 564 -NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDL 601
+ E + L + L ALR S D + ++++ P M D+
Sbjct: 279 VSXECQHLIRWCL-ALRPS-DRPTFEEIQNH--PWMQDV 313
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 100/234 (42%), Gaps = 57/234 (24%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 31 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 89
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 139
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 140 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 186
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTE 558
T GT Y PE++ +S V++ G++L++++ G E IIR +
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 240
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 58 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 116
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 166
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 167 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 213
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG------KEAIIRTEGMVSK- 563
T GT Y PE++ +S V++ G++L++++ G E IIR + +
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 273
Query: 564 -NQERRSLASFMLAALRNSPDSMSMSSLKDYIDPNMMDL 601
+ E + L + L ALR S D + ++++ P M D+
Sbjct: 274 VSXECQHLIRWCL-ALRPS-DRPTFEEIQNH--PWMQDV 308
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 89/179 (49%), Gaps = 20/179 (11%)
Query: 380 KRMTATKT----KEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLH 435
+R+++++ +E E+ IL ++ H N++ L + ++ LI E G L L
Sbjct: 48 RRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA 107
Query: 436 DPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAK 491
+ ++ + + ++ QI LD G+ Y+H H+ D+K NI LLD R K
Sbjct: 108 EKESLTEDEATQFLK-QI-LD---GVHYLHSKRIAHF---DLKPENIMLLDKNVPNPRIK 159
Query: 492 ISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ DFG+A + ++ + GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 160 LIDFGIAHKIEAGNE----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 393 EMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
E+ IL ++ H N++ L + ++ LI E G L L + ++ + + ++ Q
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK-Q 122
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGKTSDGE 508
I G+ Y+H H+ D+K NI LLD R KI DFGLA + D
Sbjct: 123 IL----NGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG 171
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 172 NEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 16/167 (9%)
Query: 388 KEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSW 447
+E E+ IL ++ H N++ L + ++ LI E G L L + ++ + +
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 133
Query: 448 IMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGK 503
++ QI LD G+ Y+H H+ D+K NI LLD R K+ DFG+A +
Sbjct: 134 FLK-QI-LD---GVHYLHSKRIAHF---DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 185
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
++ + GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 186 GNE----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 347 LFATEGFSDSSLLGHGTYGSVY--YGNIRNQEVAIKRMTATKTKEFMAEMKILCKV-HHS 403
L ++G+ +G G+Y N E A+K + +K ++ E++IL + H
Sbjct: 23 LVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-RDPSEEIEILLRYGQHP 81
Query: 404 NLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEY 463
N++ L ++L+ E + G L + + + S+++ + +EY
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-----IGKTVEY 136
Query: 464 IHEHTKTHYVHRDIKSSNIL-LDSAFRA---KISDFGLAKLVGKTSDGEATVTKVVGTFG 519
+H VHRD+K SNIL +D + +I DFG AK + + +G + T
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENG--LLMTPCYTAN 190
Query: 520 YLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
++APE L D+++ G++L+ +++G
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 51/220 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 44 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 102
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 152
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 153 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 199
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG 550
T GT Y PE++ +S V++ G++L++++ G
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 51/220 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 44 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 102
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 152
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 153 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 199
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG 550
T GT Y PE++ +S V++ G++L++++ G
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 28/175 (16%)
Query: 390 FMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLK----SHLHDPQNRGQTSL 445
E+ + +H N+V ++EL+++ + GS K +H D N + ++
Sbjct: 57 LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMN--ELAI 114
Query: 446 SWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTS 505
++I++ + L+YIH YVHR +K+S+IL+ + +S GL + S
Sbjct: 115 AYILQ-----GVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLS--GLRSNLSMIS 164
Query: 506 DGEATVTKVVGTFG--------YLAPEYLTDGLA--TAKSDVYAFGVVLFEIISG 550
G+ +VV F +L+PE L L AKSD+Y+ G+ E+ +G
Sbjct: 165 HGQRQ--RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANG 217
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 343 YDEILFATEGFSDSSLLGHGTYGSVY--YGNIRNQEVAIKRMTATKTKEFMAEMKILCKV 400
Y + + ++G+ +G G+Y N E A+K + +K ++ E++IL +
Sbjct: 19 YFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-RDPSEEIEILLRY 77
Query: 401 -HHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAAR 459
H N++ L ++L+ E + G L + + + S+++ +
Sbjct: 78 GQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-----IGK 132
Query: 460 GLEYIHEHTKTHYVHRDIKSSNIL-LDSAFRA---KISDFGLAKLVGKTSDGEATVTKVV 515
+EY+H VHRD+K SNIL +D + +I DFG AK + + +G +
Sbjct: 133 TVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENG--LLMTPC 186
Query: 516 GTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
T ++APE L D+++ G++L+ +++G
Sbjct: 187 YTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 28/175 (16%)
Query: 390 FMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLK----SHLHDPQNRGQTSL 445
E+ + +H N+V ++EL+++ + GS K +H D N + ++
Sbjct: 73 LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMN--ELAI 130
Query: 446 SWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNILLDSAFRAKISDFGLAKLVGKTS 505
++I++ + L+YIH YVHR +K+S+IL+ + +S GL + S
Sbjct: 131 AYILQ-----GVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLS--GLRSNLSMIS 180
Query: 506 DGEATVTKVVGTFG--------YLAPEYLTDGLA--TAKSDVYAFGVVLFEIISG 550
G+ +VV F +L+PE L L AKSD+Y+ G+ E+ +G
Sbjct: 181 HGQRQ--RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANG 233
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 51/220 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 11 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 119
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 120 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 166
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG 550
T GT Y PE++ +S V++ G++L++++ G
Sbjct: 167 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 51/220 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 44 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 102
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 152
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 153 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 199
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG 550
T GT Y PE++ +S V++ G++L++++ G
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 51/220 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 43 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 101
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 151
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 152 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 198
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG 550
T GT Y PE++ +S V++ G++L++++ G
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 51/220 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 43 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 101
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 151
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 152 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 198
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG 550
T GT Y PE++ +S V++ G++L++++ G
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 393 EMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
E+ IL ++ H N++ L + ++ LI E G L L + ++ + + ++ Q
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK-Q 122
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGKTSDGE 508
I G+ Y+H H+ D+K NI LLD R KI DFGLA + D
Sbjct: 123 IL----NGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG 171
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 51/220 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 44 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 102
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 152
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 153 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 199
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG 550
T GT Y PE++ +S V++ G++L++++ G
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 51/220 (23%)
Query: 358 LLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMA---------EMKILCKVH--HS 403
LLG G +GSVY G IR N VAIK + + ++ E+ +L KV S
Sbjct: 43 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 101
Query: 404 NLVELIGYAATEDELFLIYE-----------YAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
++ L+ + D LI E ++G+L+ L S W +
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL-------ARSFFWQV--- 151
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATV 511
L+A R H H +HRDIK NIL+D + K+ DFG L+ T
Sbjct: 152 --LEAVR-----HCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VY 198
Query: 512 TKVVGTFGYLAPEYLTDGLATAKS-DVYAFGVVLFEIISG 550
T GT Y PE++ +S V++ G++L++++ G
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 393 EMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
E+ IL ++ H N++ L + ++ LI E G L L + ++ + + ++ Q
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK-Q 122
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGKTSDGE 508
I G+ Y+H H+ D+K NI LLD R KI DFGLA + D
Sbjct: 123 IL----NGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG 171
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 393 EMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
E+ IL ++ H N++ L + ++ LI E G L L + ++ + + ++ Q
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK-Q 122
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGKTSDGE 508
I G+ Y+H H+ D+K NI LLD R KI DFGLA + D
Sbjct: 123 IL----NGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG 171
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 393 EMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
E+ IL ++ H N++ L + ++ LI E G L L + ++ + + ++ Q
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK-Q 122
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGKTSDGE 508
I G+ Y+H H+ D+K NI LLD R KI DFGLA + D
Sbjct: 123 IL----NGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG 171
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 393 EMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
E+ IL ++ H N++ L + ++ LI E G L L + ++ + + ++ Q
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK-Q 121
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGKTSDGE 508
I G+ Y+H H+ D+K NI LLD R KI DFGLA + D
Sbjct: 122 IL----NGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG 170
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 171 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 393 EMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
E+ IL ++ H N++ L + ++ LI E G L L + ++ + + ++ Q
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK-Q 122
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGKTSDGE 508
I G+ Y+H H+ D+K NI LLD R KI DFGLA + D
Sbjct: 123 IL----NGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG 171
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 393 EMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
E+ IL ++ H N++ L + ++ LI E G L L + ++ + + ++ Q
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK-Q 122
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGKTSDGE 508
I G+ Y+H H+ D+K NI LLD R KI DFGLA + D
Sbjct: 123 IL----NGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG 171
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 393 EMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
E+ IL ++ H N++ L + ++ LI E G L L + ++ + + ++ Q
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK-Q 122
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGKTSDGE 508
I G+ Y+H H+ D+K NI LLD R KI DFGLA + D
Sbjct: 123 IL----NGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG 171
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 393 EMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
E+ IL ++ H N++ L + ++ LI E G L L + ++ + + ++ Q
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK-Q 122
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGKTSDGE 508
I G+ Y+H H+ D+K NI LLD R KI DFGLA + D
Sbjct: 123 IL----NGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG 171
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 393 EMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
E+ IL ++ H N++ L + ++ LI E G L L + ++ + + ++ Q
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK-Q 121
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGKTSDGE 508
I G+ Y+H H+ D+K NI LLD R KI DFGLA + D
Sbjct: 122 IL----NGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG 170
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 171 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 393 EMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
E+ IL ++ H N++ L + ++ LI E G L L + ++ + + ++ Q
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK-Q 122
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGKTSDGE 508
I G+ Y+H H+ D+K NI LLD R KI DFGLA + D
Sbjct: 123 IL----NGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG 171
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 393 EMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
E+ IL ++ H N++ L + ++ LI E G L L + ++ + + ++ Q
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK-Q 122
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGKTSDGE 508
I G+ Y+H H+ D+K NI LLD R KI DFGLA + D
Sbjct: 123 IL----NGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG 171
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 388 KEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSW 447
+E E+ IL +V H N++ L ++ LI E G L L ++ + +
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 448 IMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGK 503
++ QI LD G+ Y+H H+ D+K NI LLD K+ DFGLA +
Sbjct: 120 FIK-QI-LD---GVNYLHTKKIAHF---DLKPENIMLLDKNIPIPHIKLIDFGLAHEI-- 169
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
DG + GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 170 -EDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 37/266 (13%)
Query: 356 SSLLGHGTYGSVYYGN--IRNQEVAIKRMTATKTKEFMA---------EMKILCKVH--- 401
LLG G +G+V+ G+ +VAIK + + + E+ +L KV
Sbjct: 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGG 95
Query: 402 -HSNLVELIGYAATEDELFLIYEYAQKGS-LKSHLHDPQNRGQ-TSLSWIMRVQIALDAA 458
H ++ L+ + T++ L+ E L ++ + G+ S + +V A+
Sbjct: 96 GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQ-- 153
Query: 459 RGLEYIHEHTKTHYVHRDIKSSNILLD-SAFRAKISDFGLAKLVGKTSDGEATVTKVVGT 517
H H++ VHRDIK NIL+D AK+ DFG L+ + T GT
Sbjct: 154 ------HCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSGALL-----HDEPYTDFDGT 201
Query: 518 FGYLAPEYLTDGLATA-KSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLA 576
Y PE+++ A + V++ G++L++++ G R + ++ + S
Sbjct: 202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCC 261
Query: 577 ALRN---SPDSMSMSSLKD-YIDPNM 598
AL +P S SL++ +DP M
Sbjct: 262 ALIRRCLAPKPSSRPSLEEILLDPWM 287
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 393 EMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQ 452
E+ IL ++ H N++ L + ++ LI E G L L + ++ + + ++ Q
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLK-Q 122
Query: 453 IALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGKTSDGE 508
I G+ Y+H H+ D+K NI LLD R KI DFGLA + D
Sbjct: 123 IL----NGVYYLHSLQIAHF---DLKPENIMLLDRNVPKPRIKIIDFGLAHKI----DFG 171
Query: 509 ATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
+ GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 388 KEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSW 447
+E E+ IL +V H N++ L ++ LI E G L L ++ + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 448 IMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGK 503
++ QI LD G+ Y+H H+ D+K NI LLD K+ DFGLA +
Sbjct: 120 FIK-QI-LD---GVNYLHTKKIAHF---DLKPENIMLLDKNIPIPHIKLIDFGLAH---E 168
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
DG + GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 169 IEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 350 TEGFSDSSLLGHGTYGSVYYGNIR---NQEVAIKRMTATKTKEFMAEMKILCKV-HHSNL 405
T+G+ +G G+Y SV I N E A+K + +K ++ E++IL + H N+
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIIDKSK-RDPTEEIEILLRYGQHPNI 78
Query: 406 VELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIH 465
+ L ++++ E + G L + + + S ++ + +EY+H
Sbjct: 79 ITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVL-----FTITKTVEYLH 133
Query: 466 EHTKTHYVHRDIKSSNIL-LDSAFRA---KISDFGLAKLVGKTSDGEATVTKVVGTFGYL 521
VHRD+K SNIL +D + +I DFG AK + + +G + T ++
Sbjct: 134 AQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENG--LLMTPCYTANFV 187
Query: 522 APEYLTDGLATAKSDVYAFGVVLFEIISG 550
APE L A D+++ GV+L+ +++G
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 388 KEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSW 447
+E E+ IL +V H N++ L ++ LI E G L L ++ + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 448 IMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGK 503
++ QI LD G+ Y+H H+ D+K NI LLD K+ DFGLA +
Sbjct: 120 FIK-QI-LD---GVNYLHTKKIAHF---DLKPENIMLLDKNIPIPHIKLIDFGLAH---E 168
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
DG + GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 169 IEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 388 KEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSW 447
+E E+ IL +V H N++ L ++ LI E G L L ++ + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 448 IMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGK 503
++ QI LD G+ Y+H H+ D+K NI LLD K+ DFGLA +
Sbjct: 120 FIK-QI-LD---GVNYLHTKKIAHF---DLKPENIMLLDKNIPIPHIKLIDFGLAH---E 168
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
DG + GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 169 IEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 388 KEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSW 447
+E E+ IL +V H N++ L ++ LI E G L L ++ + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 448 IMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGK 503
++ QI LD G+ Y+H H+ D+K NI LLD K+ DFGLA +
Sbjct: 120 FIK-QI-LD---GVNYLHTKKIAHF---DLKPENIMLLDKNIPIPHIKLIDFGLAH---E 168
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
DG + GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 169 IEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 388 KEFMAEMKILCKVHHSNLVELIGYAATEDELFLIYEYAQKGSLKSHLHDPQNRGQTSLSW 447
+E E+ IL +V H N++ L ++ LI E G L L ++ + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 448 IMRVQIALDAARGLEYIHEHTKTHYVHRDIKSSNI-LLDSAF---RAKISDFGLAKLVGK 503
++ QI LD G+ Y+H H+ D+K NI LLD K+ DFGLA +
Sbjct: 120 FIK-QI-LD---GVNYLHTKKIAHF---DLKPENIMLLDKNIPIPHIKLIDFGLAH---E 168
Query: 504 TSDGEATVTKVVGTFGYLAPEYLTDGLATAKSDVYAFGVVLFEIISG 550
DG + GT ++APE + ++D+++ GV+ + ++SG
Sbjct: 169 IEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 121/297 (40%), Gaps = 63/297 (21%)
Query: 359 LGHGTYGSVYYGNIRNQEVAIKRM-----TATKTKEFMAEMKILCKVHHSNLVELIG--Y 411
L G ++ G + ++ +K + + K+++F E L H N++ ++G
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 412 AATEDELFLIYEYAQKGSLKSHLHDPQN----RGQTSLSWIMRVQIALDAARGLEYIHEH 467
+ LI + GSL + LH+ N + Q V+ ALD ARG+ ++H
Sbjct: 78 SPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQA-------VKFALDMARGMAFLH-- 128
Query: 468 TKTHYVHRD-IKSSNILLDSAFRAKISDFGLAKLVGKTSDGEATVTKVVGTFGYLAPEYL 526
T + R + S ++++D A+IS + S G ++APE L
Sbjct: 129 TLEPLIPRHALNSRSVMIDEDMTARISMADVK--FSFQSPGRMYAP------AWVAPEAL 180
Query: 527 T---DGLATAKSDVYAFGVVLFEIISGKEAIIRTEGMVSKNQERRSLASFMLAALRNSPD 583
+ +D+++F V+L+E+++ + A L N
Sbjct: 181 QKKPEDTNRRSADMWSFAVLLWELVTREVP---------------------FADLSNMEI 219
Query: 584 SM--SMSSLKDYIDPNMMDLYPHDCLFKMAMLAKQCVDEDPILRPDMKQVVISLSQI 638
M ++ L+ I P + PH ++ L K C++EDP RP +V L ++
Sbjct: 220 GMKVALEGLRPTIPPG---ISPH-----VSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 359 LGHGTYGSVYYG-NIR-NQEVAIK-RMTATKTKEFMAEMKILCKVHHSNLVELIGYAATE 415
+G G++G +Y G NI+ N+EVAIK TK + + E KI + + + + E
Sbjct: 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVE 74
Query: 416 DELFLIYEYAQKGSLKSHLHDPQNRGQTSLSWIMRVQIALDAARGLEYIHEHTKTHYVHR 475
+ Y L L D N LS + +A +E++H + ++HR
Sbjct: 75 GD----YNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS---FLHR 127
Query: 476 DIKSSNILLDSAFRAK---ISDFGLAKLVGKTSDGEATVTK----VVGTFGYLAPEYLTD 528
DIK N L+ RA I DFGLAK TS + + + GT Y +
Sbjct: 128 DIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLG 187
Query: 529 GLATAKSDVYAFGVVLFEIISG 550
+ + D+ + G VL + G
Sbjct: 188 IEQSRRDDLESLGYVLMYFLRG 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,223,037
Number of Sequences: 62578
Number of extensions: 735611
Number of successful extensions: 4539
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 237
Number of HSP's that attempted gapping in prelim test: 1866
Number of HSP's gapped (non-prelim): 1222
length of query: 639
length of database: 14,973,337
effective HSP length: 105
effective length of query: 534
effective length of database: 8,402,647
effective search space: 4487013498
effective search space used: 4487013498
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)