Your job contains 1 sequence.
>036510
MPPQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE
VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA
CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS
GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW
TVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036510
(288 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2045648 - symbol:AT2G30050 "AT2G30050" species... 1333 4.1e-136 1
TAIR|locus:2100267 - symbol:AT3G01340 "AT3G01340" species... 1298 2.1e-132 1
ZFIN|ZDB-GENE-040426-2649 - symbol:sec13 "SEC13 homolog (... 846 1.7e-84 1
UNIPROTKB|E1BVC4 - symbol:SEC13 "Uncharacterized protein"... 842 4.4e-84 1
UNIPROTKB|F1PDM3 - symbol:SEC13 "Uncharacterized protein"... 837 1.5e-83 1
MGI|MGI:99832 - symbol:Sec13 "SEC13 homolog (S. cerevisia... 836 1.9e-83 1
RGD|1359555 - symbol:Sec13 "SEC13 homolog (S. cerevisiae)... 836 1.9e-83 1
UNIPROTKB|Q3ZCC9 - symbol:SEC13 "Protein SEC13 homolog" s... 829 1.0e-82 1
UNIPROTKB|P55735 - symbol:SEC13 "Protein SEC13 homolog" s... 826 2.2e-82 1
FB|FBgn0024509 - symbol:Sec13 "Sec13 ortholog (S. cerevis... 787 3.0e-78 1
DICTYBASE|DDB_G0292052 - symbol:sec13 "putative transport... 785 4.8e-78 1
POMBASE|SPBC215.15 - symbol:sec13 "COPII-coated vesicle c... 712 2.6e-70 1
ASPGD|ASPL0000075365 - symbol:sec13 species:162425 "Emeri... 698 8.0e-69 1
CGD|CAL0004667 - symbol:SEC13 species:5476 "Candida albic... 666 2.0e-65 1
SGD|S000004198 - symbol:SEC13 "Structural component of 3 ... 664 3.2e-65 1
UNIPROTKB|A8XJ40 - symbol:npp-20 "Protein SEC13 homolog" ... 570 2.9e-55 1
UNIPROTKB|E3NCB9 - symbol:Cre-npp-20 "CRE-NPP-20 protein"... 547 8.0e-53 1
WB|WBGene00003806 - symbol:npp-20 species:6239 "Caenorhab... 517 1.2e-49 1
UNIPROTKB|Q9N4A7 - symbol:npp-20 "Protein SEC13 homolog" ... 517 1.2e-49 1
DICTYBASE|DDB_G0277257 - symbol:DDB_G0277257 "Nucleoporin... 327 5.3e-45 2
UNIPROTKB|F1SQA9 - symbol:SEC13 "Uncharacterized protein"... 445 5.2e-42 1
UNIPROTKB|E1BYP7 - symbol:SEH1L "Uncharacterized protein"... 351 4.7e-32 1
ZFIN|ZDB-GENE-030131-6689 - symbol:seh1l "SEH1-like (S. c... 351 4.7e-32 1
UNIPROTKB|Q6GNF1 - symbol:seh1l-b "Nucleoporin seh1-B" sp... 347 1.3e-31 1
UNIPROTKB|Q4FZW5 - symbol:seh1l-a "Nucleoporin seh1-A" sp... 345 2.0e-31 1
UNIPROTKB|C1BK83 - symbol:seh1l "Nucleoporin seh1" specie... 345 2.0e-31 1
UNIPROTKB|Q5U4Y8 - symbol:seh1l "Nucleoporin seh1" specie... 344 2.6e-31 1
MGI|MGI:1919374 - symbol:Seh1l "SEH1-like (S. cerevisiae"... 343 3.3e-31 1
UNIPROTKB|A7YY75 - symbol:SEH1L "Nucleoporin SEH1" specie... 341 5.4e-31 1
UNIPROTKB|Q96EE3 - symbol:SEH1L "Nucleoporin SEH1" specie... 341 5.4e-31 1
UNIPROTKB|Q5RAN6 - symbol:SEH1L "Nucleoporin SEH1" specie... 341 5.4e-31 1
SGD|S000003068 - symbol:SEH1 "Component of two distinct c... 285 6.1e-31 2
UNIPROTKB|B3GEK9 - symbol:npp-20 "Nuclear pore complex pr... 335 2.3e-30 1
FB|FBgn0033247 - symbol:Nup44A "Nucleoporin at 44A" speci... 326 2.1e-29 1
POMBASE|SPAC15F9.02 - symbol:seh1 "nucleoporin Seh1" spec... 283 2.0e-28 2
UNIPROTKB|B7QKS1 - symbol:ISCW023049 "Probable cytosolic ... 178 7.3e-22 2
UNIPROTKB|I3LR40 - symbol:SEH1L "Uncharacterized protein"... 248 3.9e-21 1
CGD|CAL0005451 - symbol:orf19.2186 species:5476 "Candida ... 242 1.7e-20 1
UNIPROTKB|Q5A2S9 - symbol:SEH1 "Putative uncharacterized ... 242 1.7e-20 1
WB|WBGene00003804 - symbol:npp-18 species:6239 "Caenorhab... 241 2.3e-20 1
UNIPROTKB|Q17GR9 - symbol:Ciao1 "Probable cytosolic iron-... 234 1.2e-19 1
UNIPROTKB|B3MC74 - symbol:Ciao1 "Probable cytosolic iron-... 233 1.5e-19 1
UNIPROTKB|A7RWD2 - symbol:v1g226592 "Probable cytosolic i... 227 6.5e-19 1
UNIPROTKB|B4P7Q3 - symbol:Ciao1 "Probable cytosolic iron-... 224 1.4e-18 1
UNIPROTKB|B4MY77 - symbol:Ciao1 "Probable cytosolic iron-... 224 1.4e-18 1
UNIPROTKB|B4JW81 - symbol:Ciao1 "Probable cytosolic iron-... 224 1.4e-18 1
FB|FBgn0033972 - symbol:Ciao1 "Ciao1" species:7227 "Droso... 223 1.7e-18 1
UNIPROTKB|B0XAF3 - symbol:Ciao1 "Probable cytosolic iron-... 222 2.4e-18 1
UNIPROTKB|B5X212 - symbol:ciao1b "Probable cytosolic iron... 219 4.9e-18 1
UNIPROTKB|B4QFZ8 - symbol:Ciao1 "Probable cytosolic iron-... 219 5.2e-18 1
UNIPROTKB|Q292E8 - symbol:Ciao1 "Probable cytosolic iron-... 218 6.8e-18 1
UNIPROTKB|B4HRQ6 - symbol:Ciao1 "Probable cytosolic iron-... 217 9.0e-18 1
UNIPROTKB|B3NQR5 - symbol:Ciao1 "Probable cytosolic iron-... 217 9.0e-18 1
SGD|S000002675 - symbol:CIA1 "Component of cytosolic iron... 216 1.1e-17 1
RGD|1307285 - symbol:Ciao1 "cytosolic iron-sulfur protein... 216 1.3e-17 1
MGI|MGI:1346998 - symbol:Ciao1 "cytosolic iron-sulfur pro... 215 1.7e-17 1
UNIPROTKB|Q32PJ6 - symbol:CIAO1 "Probable cytosolic iron-... 214 2.2e-17 1
UNIPROTKB|Q7PS24 - symbol:Ciao1 "Probable cytosolic iron-... 213 3.1e-17 1
UNIPROTKB|O76071 - symbol:CIAO1 "Probable cytosolic iron-... 205 2.6e-15 1
DICTYBASE|DDB_G0269728 - symbol:ciao1 "putative cytosolic... 204 3.3e-15 1
UNIPROTKB|Q28DW0 - symbol:ciao1 "Probable cytosolic iron-... 202 7.2e-15 1
UNIPROTKB|F1SU35 - symbol:CIAO1 "Uncharacterized protein"... 202 7.7e-15 1
ZFIN|ZDB-GENE-040426-839 - symbol:ciao1 "cytosolic iron-s... 186 1.2e-14 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 207 2.9e-14 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 134 5.3e-14 2
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 197 8.4e-14 1
UNIPROTKB|B4LJT7 - symbol:Ciao1 "Probable cytosolic iron-... 193 1.4e-13 1
UNIPROTKB|B4KTK4 - symbol:Ciao1 "Probable cytosolic iron-... 193 1.4e-13 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 201 1.8e-13 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 138 4.5e-13 2
UNIPROTKB|B5X9P2 - symbol:ciao1a "Probable cytosolic iron... 189 4.7e-13 1
UNIPROTKB|B4GDM7 - symbol:Ciao1 "Probable cytosolic iron-... 189 5.0e-13 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 134 6.5e-13 2
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 134 6.6e-13 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 134 6.6e-13 2
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 134 6.6e-13 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 134 6.6e-13 2
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 134 1.1e-12 2
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 141 1.2e-12 2
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 188 1.3e-12 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 187 1.8e-12 1
TAIR|locus:2057381 - symbol:emb1345 "AT2G26060" species:3... 185 2.1e-12 1
POMBASE|SPAC806.02c - symbol:SPAC806.02c "Par A family AT... 188 3.1e-12 1
UNIPROTKB|B3RNR8 - symbol:TRIADDRAFT_20668 "Probable cyto... 181 4.1e-12 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 134 4.5e-12 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 183 5.6e-12 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 183 6.5e-12 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 113 1.0e-11 2
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 176 2.6e-11 1
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 143 2.6e-11 2
UNIPROTKB|A4R7U3 - symbol:CIA1 "Probable cytosolic iron-s... 153 2.8e-11 3
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 176 4.1e-11 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 176 4.1e-11 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 176 4.1e-11 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 176 4.1e-11 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 176 4.1e-11 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 176 4.1e-11 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 176 4.1e-11 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 176 4.1e-11 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 176 4.1e-11 1
WARNING: Descriptions of 531 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2045648 [details] [associations]
symbol:AT2G30050 "AT2G30050" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005643 "nuclear pore"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0006900
"membrane budding" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005643 EMBL:AC004680 EMBL:AC004165 UniGene:At.25577
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:AF412112
EMBL:AY124848 IPI:IPI00529872 PIR:T00593 RefSeq:NP_180566.1
UniGene:At.74333 ProteinModelPortal:O64740 SMR:O64740 IntAct:O64740
STRING:O64740 PaxDb:O64740 PRIDE:O64740 ProMEX:O64740
EnsemblPlants:AT2G30050.1 GeneID:817556 KEGG:ath:AT2G30050
TAIR:At2g30050 InParanoid:O64740 PhylomeDB:O64740
ProtClustDB:CLSN2683847 ArrayExpress:O64740 Genevestigator:O64740
Uniprot:O64740
Length = 302
Score = 1333 (474.3 bits), Expect = 4.1e-136, P = 4.1e-136
Identities = 241/289 (83%), Positives = 261/289 (90%)
Query: 1 MPPQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNT-SQHLAKLSGHKGAVW 59
MP QKIETGHED VHDV MDYYGKR+ATASSD +IKI GV NN SQ LA L+GH+G VW
Sbjct: 1 MPGQKIETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVW 60
Query: 60 EVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCL 119
EVAWAHPK+GSILASCS+DG VI+WKEGN N+W +DHVF DHKSSVNSI WAPH++GL L
Sbjct: 61 EVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSL 120
Query: 120 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLC 179
ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP+TAPGALV SG LDPV KL
Sbjct: 121 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLA 180
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
SGGCDNTVKVWKL NG WKMDCFPALQ HTDWVRDVAWAPNLGLPKSTIAS S+DGKVII
Sbjct: 181 SGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVII 240
Query: 240 WTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288
WTV +EG+QWEGKVL DF TPV+RVSWSLTGN+LAV+DGNNNVT+W+EA
Sbjct: 241 WTVGKEGEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGNNNVTVWKEA 289
Score = 177 (67.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 73/264 (27%), Positives = 109/264 (41%)
Query: 8 TGHEDTVHDVAMDY--YGKRLATASSDYSIKIIGVGNN---TSQHLAKLSGHKGAVWEVA 62
TGH V +VA + YG LA+ S D + + GN T H+ + HK +V +A
Sbjct: 53 TGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHV--FTDHKSSVNSIA 110
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHEL------- 115
WA G LA S DG + ++ W + + H V S+ WAP
Sbjct: 111 WAPHDIGLSLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSS 170
Query: 116 GLC-----LACGSSDGNISVFTARADGGW--DTSRIDQAHPVGVTSVSWAPSTAPGALVG 168
GL LA G D + V+ A+G W D Q H V V+WAP+
Sbjct: 171 GLLDPVYKLASGGCDNTVKVWKL-ANGSWKMDCFPALQKHTDWVRDVAWAPNL------- 222
Query: 169 SGFLDPVQKLCSGGCDNTVKVWKL-YNGI-WKMDCFPALQMHTDWVRDVAWAPNLGLPKS 226
G P + SG D V +W + G W+ ++ D++ V W + L +
Sbjct: 223 -GL--PKSTIASGSQDGKVIIWTVGKEGEQWEG------KVLKDFMTPV-WRVSWSLTGN 272
Query: 227 TIASASEDGKVIIWTVAREGDQWE 250
+A + + V +W A +G+ WE
Sbjct: 273 LLAVSDGNNNVTVWKEAVDGE-WE 295
>TAIR|locus:2100267 [details] [associations]
symbol:AT3G01340 "AT3G01340" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006900 "membrane budding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 EMBL:CP002686 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC010676
HOGENOM:HOG000216895 KO:K14004 ProtClustDB:CLSN2683847
EMBL:AF370262 EMBL:AY063079 IPI:IPI00528696 RefSeq:NP_001030616.1
RefSeq:NP_186783.1 UniGene:At.18565 ProteinModelPortal:Q9SRI1
SMR:Q9SRI1 IntAct:Q9SRI1 STRING:Q9SRI1 PRIDE:Q9SRI1 ProMEX:Q9SRI1
DNASU:821216 EnsemblPlants:AT3G01340.1 EnsemblPlants:AT3G01340.2
GeneID:821216 KEGG:ath:AT3G01340 TAIR:At3g01340 InParanoid:Q9SRI1
OMA:KIDQAHP PhylomeDB:Q9SRI1 ArrayExpress:Q9SRI1
Genevestigator:Q9SRI1 Uniprot:Q9SRI1
Length = 302
Score = 1298 (462.0 bits), Expect = 2.1e-132, P = 2.1e-132
Identities = 229/289 (79%), Positives = 258/289 (89%)
Query: 1 MPPQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNT-SQHLAKLSGHKGAVW 59
MPPQKIETGH DT+HDV MDYYGKR+ATASSD +IKI GV N+ SQHLA L+GH+G VW
Sbjct: 1 MPPQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVW 60
Query: 60 EVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCL 119
+VAWAHPKFGS+LASCS+DG +I+WKEGN N+W + HVF DHK SVNSI WAPHELGL L
Sbjct: 61 QVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSL 120
Query: 120 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLC 179
ACG+SDGNISVF+ARADGGWDT++IDQAHPVGVTSVSWAP+T PGALV SG +DPV KL
Sbjct: 121 ACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLA 180
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
SGGCD+TVKVWK NG WKMDCFPAL HTDWVRDVAWAPNLGLPKSTIAS SEDGKVII
Sbjct: 181 SGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVII 240
Query: 240 WTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288
WT+ +EG+QWEG VL DFKTPV+RVSWSLTGN+LAV+DGNNNVT+W+E+
Sbjct: 241 WTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGNLLAVSDGNNNVTVWKES 289
Score = 151 (58.2 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 68/262 (25%), Positives = 105/262 (40%)
Query: 8 TGHEDTVHDVAMDY--YGKRLATASSDYSIKIIGVGNNTSQHLAKL-SGHKGAVWEVAWA 64
TGH V VA + +G LA+ S D I + GN A + + HK +V +AWA
Sbjct: 53 TGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWA 112
Query: 65 HPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPH-ELGLC----- 118
+ G LA + DG + ++ W + + H V S+ WAP E G
Sbjct: 113 PHELGLSLACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGM 172
Query: 119 ------LACGSSDGNISVFTARADGGW--DTSRIDQAHPVGVTSVSWAPSTAPGALVGSG 170
LA G D + V+ ++G W D H V V+WAP+ G
Sbjct: 173 IDPVYKLASGGCDSTVKVWKF-SNGSWKMDCFPALNKHTDWVRDVAWAPNL--------G 223
Query: 171 FLDPVQKLCSGGCDNTVKVWKL-YNGI-WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTI 228
P + SG D V +W + G W+ + W V+W+ L + +
Sbjct: 224 L--PKSTIASGSEDGKVIIWTIGKEGEQWEGTVLKDFKTPV-W--RVSWS----LTGNLL 274
Query: 229 ASASEDGKVIIWTVAREGDQWE 250
A + + V +W + +G+ WE
Sbjct: 275 AVSDGNNNVTVWKESVDGE-WE 295
>ZFIN|ZDB-GENE-040426-2649 [details] [associations]
symbol:sec13 "SEC13 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0055123 "digestive system development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0070971 "endoplasmic reticulum exit site" evidence=IDA]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
[GO:0051216 "cartilage development" evidence=IMP] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=ISS] [GO:0070278
"extracellular matrix constituent secretion" evidence=IMP]
[GO:0005622 "intracellular" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-2649
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0001889 GO:GO:0051216
GO:GO:0006888 GO:GO:0007029 GO:GO:0055123 GO:GO:0070278
GO:GO:0070971 CTD:6396 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 HOVERGEN:HBG057343 KO:K14004 EMBL:BX537350
EMBL:BC054585 EMBL:BC153483 EMBL:CT027575 IPI:IPI00513236
RefSeq:NP_998500.1 UniGene:Dr.5496 STRING:Q7T2E1
Ensembl:ENSDART00000077063 GeneID:798071 KEGG:dre:798071
InParanoid:Q7T2E1 OMA:ISWAPAT NextBio:20933269 Uniprot:Q7T2E1
Length = 320
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 158/287 (55%), Positives = 199/287 (69%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAH
Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPVWQVAWAH 67
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
P +G+ILASCS+D VIIWKE NS W K + + H SSVNS+ W P++ GL LACGSSD
Sbjct: 68 PMYGNILASCSYDRKVIIWKEENST-WDKMYEYTGHDSSVNSVCWGPYDFGLILACGSSD 126
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGF-LDP--VQKLCSGG 182
G ISV T DG WD +I+ AH +G +VSWAP+ PG+L+ P +++ SGG
Sbjct: 127 GAISVLTCSGDGHWDIKKINNAHTIGCNAVSWAPAVVPGSLIEQPTGQKPNYIKRFVSGG 186
Query: 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV 242
CDN VK+WK +G WK D L+ H+DWVRDV WAP++GLP STIAS S+DG+V IWT
Sbjct: 187 CDNLVKLWKEEDGQWKED--QKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVFIWTC 244
Query: 243 ARE-GDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288
G+ W K+LH F V+ VSWS+TGNILAV+ G+N VTLW+E+
Sbjct: 245 DDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKES 291
Score = 179 (68.1 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 68/257 (26%), Positives = 101/257 (39%)
Query: 9 GHEDTVHDVAMDY--YGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHP 66
GHE V VA + YG LA+ S D + I N+T + + +GH +V V W
Sbjct: 55 GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENSTWDKMYEYTGHDSSVNSVCWGPY 114
Query: 67 KFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHEL-GLCLA--CGS 123
FG ILA S DG + + W + H N++ WAP + G + G
Sbjct: 115 DFGLILACGSSDGAISVLTCSGDGHWDIKKINNAHTIGCNAVSWAPAVVPGSLIEQPTGQ 174
Query: 124 SDGNISVFTA-----------RADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFL 172
I F + DG W + +AH V V WAPS +G
Sbjct: 175 KPNYIKRFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPS------IGL--- 225
Query: 173 DPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASAS 232
P + S D V +W + + + A +H DV W + + + +A +
Sbjct: 226 -PTSTIASCSQDGRVFIWTCDDPAG--NTWTAKLLHK--FNDVVWHVSWSITGNILAVSG 280
Query: 233 EDGKVIIWTVAREGDQW 249
D KV +W + +G QW
Sbjct: 281 GDNKVTLWKESVDG-QW 296
>UNIPROTKB|E1BVC4 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AADN02014522 EMBL:AADN02014521 IPI:IPI00586706
RefSeq:XP_414450.3 UniGene:Gga.12581 ProteinModelPortal:E1BVC4
Ensembl:ENSGALT00000013715 GeneID:416119 KEGG:gga:416119
Uniprot:E1BVC4
Length = 320
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 156/287 (54%), Positives = 199/287 (69%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAH
Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
P +G+ILASCS+D VIIWKE N W K + + H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68 PMYGNILASCSYDRKVIIWKEENGT-WEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSD 126
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGG 182
G IS+ + DG W+ +I AH +G +VSWAP+ PG+L+ SG + +++ SGG
Sbjct: 127 GAISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIKRFASGG 186
Query: 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV 242
CDN VK+WK +G WK + L+ H+DWVRDVAWAP++GLP STIAS S+DG+V IWT
Sbjct: 187 CDNLVKIWKEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTC 244
Query: 243 A-REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288
G W K+LH F V+ VSWS+T NILAV+ G+N VTLW+E+
Sbjct: 245 DDASGSSWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 291
Score = 182 (69.1 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 67/255 (26%), Positives = 102/255 (40%)
Query: 9 GHEDTVHDVAMDY--YGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHP 66
GHE V VA + YG LA+ S D + I N T + + +GH +V V WA
Sbjct: 55 GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPH 114
Query: 67 KFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHEL-GLCL------ 119
+G ILA S DG + + +W + H N++ WAP + G +
Sbjct: 115 DYGLILACGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQ 174
Query: 120 --------ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGF 171
A G D + ++ DG W + +AH V V+WAPS +G
Sbjct: 175 KPNYIKRFASGGCDNLVKIWKEE-DGQWKEEQKLEAHSDWVRDVAWAPS------IGL-- 225
Query: 172 LDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA 231
P + S D V +W + P L +H DV W + + + +A +
Sbjct: 226 --PTSTIASCSQDGRVFIWTCDDASGS-SWSPKL-LHK--FNDVVWHVSWSITANILAVS 279
Query: 232 SEDGKVIIWTVAREG 246
D KV +W + +G
Sbjct: 280 GGDNKVTLWKESVDG 294
Score = 120 (47.3 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 39/125 (31%), Positives = 54/125 (43%)
Query: 22 YGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFG---SILASCSFD 78
Y KR A+ D +KI + + KL H V +VAWA P G S +ASCS D
Sbjct: 178 YIKRFASGGCDNLVKIWKEEDGQWKEEQKLEAHSDWVRDVAWA-PSIGLPTSTIASCSQD 236
Query: 79 GTVIIWK--EGNSNEWIKD--HVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTAR 134
G V IW + + + W H F D V + W+ LA D ++++
Sbjct: 237 GRVFIWTCDDASGSSWSPKLLHKFND---VVWHVSWSI--TANILAVSGGDNKVTLWKES 291
Query: 135 ADGGW 139
DG W
Sbjct: 292 VDGLW 296
>UNIPROTKB|F1PDM3 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AAEX03012077 RefSeq:XP_850437.1 ProteinModelPortal:F1PDM3
Ensembl:ENSCAFT00000008242 GeneID:607653 KEGG:cfa:607653
NextBio:20893365 Uniprot:F1PDM3
Length = 322
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 157/288 (54%), Positives = 200/288 (69%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAH
Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
P +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68 PMYGNILASCSYDRKVIIWKEENGT-WEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSD 126
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGG 182
G IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGG
Sbjct: 127 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGG 186
Query: 183 CDNTVKVWKLY-NGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT 241
CDN +K+WK +G WK + L+ H+DWVRDVAWAP++GLP STIAS S+DG+V IWT
Sbjct: 187 CDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244
Query: 242 VA-REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288
G+ W K+LH F V+ VSWS+T NILAV+ G+N VTLW+E+
Sbjct: 245 CDDTSGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292
Score = 192 (72.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 71/259 (27%), Positives = 106/259 (40%)
Query: 9 GHEDTVHDVAMDY--YGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHP 66
GHE V VA + YG LA+ S D + I N T + + +GH +V V WA
Sbjct: 55 GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPH 114
Query: 67 KFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHEL-GLCL------ 119
+G ILA S DG + + +W + H N++ WAP + G +
Sbjct: 115 DYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQ 174
Query: 120 --------ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTA-PGALVGSG 170
A G D I ++ DG W + +AH V V+WAPS P + + S
Sbjct: 175 KPNYIKKFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASC 234
Query: 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
D ++ CD+T W P L +H DV W + + + +A
Sbjct: 235 SQDG--RVFIWTCDDTS------GNTWS----PKL-LHK--FNDVVWHVSWSITANILAV 279
Query: 231 ASEDGKVIIWTVAREGDQW 249
+ D KV +W + +G QW
Sbjct: 280 SGGDNKVTLWKESVDG-QW 297
>MGI|MGI:99832 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=ISO] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=ISO] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:99832 GO:GO:0012507 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OMA:IKLWKEE OrthoDB:EOG40P471
EMBL:AK003354 EMBL:AK009755 EMBL:BC002128 IPI:IPI00133920
RefSeq:NP_077168.2 UniGene:Mm.29296 ProteinModelPortal:Q9D1M0
SMR:Q9D1M0 IntAct:Q9D1M0 STRING:Q9D1M0 PhosphoSite:Q9D1M0
REPRODUCTION-2DPAGE:Q9D1M0 PaxDb:Q9D1M0 PRIDE:Q9D1M0 DNASU:110379
Ensembl:ENSMUST00000032440 GeneID:110379 KEGG:mmu:110379
UCSC:uc009dhm.1 InParanoid:Q9D1M0 NextBio:363887 Bgee:Q9D1M0
CleanEx:MM_SEC13 Genevestigator:Q9D1M0
GermOnline:ENSMUSG00000030298 Uniprot:Q9D1M0
Length = 322
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 156/288 (54%), Positives = 200/288 (69%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAH
Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
P +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68 PMYGNILASCSYDRKVIIWKEENGT-WEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSD 126
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGG 182
G IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGG
Sbjct: 127 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGG 186
Query: 183 CDNTVKVWKLY-NGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT 241
CDN +K+W+ +G WK + L+ H+DWVRDVAWAP++GLP STIAS S+DG+V IWT
Sbjct: 187 CDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244
Query: 242 VA-REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288
G+ W K+LH F V+ VSWS+T NILAV+ G+N VTLW+E+
Sbjct: 245 CDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292
Score = 200 (75.5 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 72/258 (27%), Positives = 105/258 (40%)
Query: 9 GHEDTVHDVAMDY--YGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHP 66
GHE V VA + YG LA+ S D + I N T + + SGH +V V WA
Sbjct: 55 GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCWAPH 114
Query: 67 KFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHEL-GLCL------ 119
+G ILA S DG + + +W + H N++ WAP + G +
Sbjct: 115 DYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQ 174
Query: 120 --------ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGF 171
A G D I ++ DG W + +AH V V+WAPS +G
Sbjct: 175 KPNYIKKFASGGCDNLIKLWREEEDGQWKEEQKLEAHSDWVRDVAWAPS------IGL-- 226
Query: 172 LDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA 231
P + S D V +W + M P L +H DV W + + + +A +
Sbjct: 227 --PTSTIASCSQDGRVFIWTCDDASGNM-WSPKL-LHK--FNDVVWHVSWSITANILAVS 280
Query: 232 SEDGKVIIWTVAREGDQW 249
D KV +W + +G QW
Sbjct: 281 GGDNKVTLWKESVDG-QW 297
>RGD|1359555 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0005635 "nuclear envelope" evidence=ISO]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031080 "nuclear
pore outer ring" evidence=ISO;ISS] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0000776 "kinetochore" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1359555 GO:GO:0012507 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031 eggNOG:COG2319
GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:BC084705
IPI:IPI00364566 RefSeq:NP_001006979.1 UniGene:Rn.1553
ProteinModelPortal:Q5XFW8 SMR:Q5XFW8 STRING:Q5XFW8 PRIDE:Q5XFW8
Ensembl:ENSRNOT00000014377 GeneID:297522 KEGG:rno:297522
UCSC:RGD:1359555 InParanoid:Q5XFW8 NextBio:642376
Genevestigator:Q5XFW8 Uniprot:Q5XFW8
Length = 322
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 156/288 (54%), Positives = 200/288 (69%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAH
Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
P +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68 PMYGNILASCSYDRKVIIWKEENGT-WEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSD 126
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGG 182
G IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGG
Sbjct: 127 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGG 186
Query: 183 CDNTVKVWKLY-NGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT 241
CDN +K+W+ +G WK + L+ H+DWVRDVAWAP++GLP STIAS S+DG+V IWT
Sbjct: 187 CDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244
Query: 242 VA-REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288
G+ W K+LH F V+ VSWS+T NILAV+ G+N VTLW+E+
Sbjct: 245 CDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292
Score = 200 (75.5 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 72/258 (27%), Positives = 105/258 (40%)
Query: 9 GHEDTVHDVAMDY--YGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHP 66
GHE V VA + YG LA+ S D + I N T + + SGH +V V WA
Sbjct: 55 GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCWAPH 114
Query: 67 KFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHEL-GLCL------ 119
+G ILA S DG + + +W + H N++ WAP + G +
Sbjct: 115 DYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQ 174
Query: 120 --------ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGF 171
A G D I ++ DG W + +AH V V+WAPS +G
Sbjct: 175 KPNYIKKFASGGCDNLIKLWREEEDGQWKEEQKLEAHSDWVRDVAWAPS------IGL-- 226
Query: 172 LDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA 231
P + S D V +W + M P L +H DV W + + + +A +
Sbjct: 227 --PTSTIASCSQDGRVFIWTCDDASGNM-WSPKL-LHK--FNDVVWHVSWSITANILAVS 280
Query: 232 SEDGKVIIWTVAREGDQW 249
D KV +W + +G QW
Sbjct: 281 GGDNKVTLWKESVDG-QW 297
>UNIPROTKB|Q3ZCC9 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9913 "Bos
taurus" [GO:0031080 "nuclear pore outer ring" evidence=ISS]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0012507 GO:GO:0000776 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0051028 GO:GO:0031080 EMBL:BC102514
IPI:IPI00691005 RefSeq:NP_001069033.1 UniGene:Bt.62595
ProteinModelPortal:Q3ZCC9 SMR:Q3ZCC9 STRING:Q3ZCC9 PRIDE:Q3ZCC9
Ensembl:ENSBTAT00000023702 GeneID:512530 KEGG:bta:512530 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 InParanoid:Q3ZCC9 KO:K14004 OMA:IKLWKEE
OrthoDB:EOG40P471 NextBio:20870435 Uniprot:Q3ZCC9
Length = 322
Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
Identities = 156/288 (54%), Positives = 199/288 (69%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAH
Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPVWQVAWAH 67
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
P +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68 PMYGNILASCSYDRKVIIWKEENGT-WEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSD 126
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGG 182
G IS+ T G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGG
Sbjct: 127 GAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGG 186
Query: 183 CDNTVKVWKLY-NGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT 241
CDN +K+WK +G WK + L+ H+DWVRDVAWAP++GLP STIAS S+DG+V +WT
Sbjct: 187 CDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWT 244
Query: 242 VA-REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288
G+ W K+LH F V+ VSWS+T NILAV+ G+N VTLW+E+
Sbjct: 245 CDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292
Score = 190 (71.9 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 71/258 (27%), Positives = 104/258 (40%)
Query: 9 GHEDTVHDVAMDY--YGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHP 66
GHE V VA + YG LA+ S D + I N T + + +GH +V V WA
Sbjct: 55 GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPH 114
Query: 67 KFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHEL-GLCL------ 119
+G ILA S DG + + +W + H N++ WAP + G +
Sbjct: 115 DYGLILACGSSDGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQ 174
Query: 120 --------ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGF 171
A G D I ++ DG W + +AH V V+WAPS +G
Sbjct: 175 KPNYIKKFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPS------IGL-- 226
Query: 172 LDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA 231
P + S D V VW + P L +H DV W + + + +A +
Sbjct: 227 --PTSTIASCSQDGRVFVWTCDDASGNT-WSPKL-LHK--FNDVVWHVSWSITANILAVS 280
Query: 232 SEDGKVIIWTVAREGDQW 249
D KV +W + +G QW
Sbjct: 281 GGDNKVTLWKESVDG-QW 297
>UNIPROTKB|P55735 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9606 "Homo
sapiens" [GO:0051028 "mRNA transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=NAS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=NAS]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0000087 "M phase of
mitotic cell cycle" evidence=TAS] [GO:0000236 "mitotic
prometaphase" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=TAS] [GO:0012507 "ER to Golgi transport vesicle
membrane" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0043687 "post-translational protein
modification" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0048208 "COPII vesicle coating"
evidence=TAS] Reactome:REACT_11123 Reactome:REACT_17015
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0006886 GO:GO:0012507 GO:GO:0002474 Reactome:REACT_21300
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0019886
GO:GO:0005789 eggNOG:COG2319 GO:GO:0043687 GO:GO:0018279
GO:GO:0051028 GO:GO:0000236 GO:GO:0048208 GO:GO:0031080 PDB:3BG0
PDB:3BG1 PDBsum:3BG0 PDBsum:3BG1 CTD:6396 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:L09260
EMBL:BC002634 EMBL:BC006167 EMBL:BC091506 IPI:IPI00479141
RefSeq:NP_001129704.1 RefSeq:NP_899195.1 UniGene:Hs.166924
ProteinModelPortal:P55735 SMR:P55735 DIP:DIP-39091N IntAct:P55735
MINT:MINT-1154053 STRING:P55735 PhosphoSite:P55735 DMDM:50403748
PaxDb:P55735 PRIDE:P55735 DNASU:6396 Ensembl:ENST00000337354
Ensembl:ENST00000350697 GeneID:6396 KEGG:hsa:6396 UCSC:uc003bvl.3
GeneCards:GC03M010335 HGNC:HGNC:10697 HPA:HPA035292 MIM:600152
neXtProt:NX_P55735 PharmGKB:PA35620 InParanoid:P55735
EvolutionaryTrace:P55735 GenomeRNAi:6396 NextBio:24846
ArrayExpress:P55735 Bgee:P55735 CleanEx:HS_SEC13
Genevestigator:P55735 GermOnline:ENSG00000157020 Uniprot:P55735
Length = 322
Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
Identities = 154/288 (53%), Positives = 199/288 (69%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAH
Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
P +G+ILASCS+D VIIW+E N W K H H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68 PMYGNILASCSYDRKVIIWREENGT-WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD 126
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGG 182
G IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + +++ SGG
Sbjct: 127 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGG 186
Query: 183 CDNTVKVWKLY-NGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT 241
CDN +K+WK +G WK + L+ H+DWVRDVAWAP++GLP STIAS S+DG+V IWT
Sbjct: 187 CDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244
Query: 242 VA-REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288
+ W K+LH F V+ VSWS+T NILAV+ G+N VTLW+E+
Sbjct: 245 CDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292
Score = 195 (73.7 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 72/261 (27%), Positives = 104/261 (39%)
Query: 9 GHEDTVHDVAMDY--YGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHP 66
GHE V VA + YG LA+ S D + I N T + + +GH +V V WA
Sbjct: 55 GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPH 114
Query: 67 KFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP---------HELGL 117
+G ILA S DG + + +W + H N++ WAP H G
Sbjct: 115 DYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQ 174
Query: 118 C------LACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGF 171
A G D I ++ DG W + +AH V V+WAPS +G
Sbjct: 175 KPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPS------IGL-- 226
Query: 172 LDPVQKLCSGGCDNTVKVWKL---YNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTI 228
P + S D V +W + W P L +H DV W + + + +
Sbjct: 227 --PTSTIASCSQDGRVFIWTCDDASSNTWS----PKL-LHK--FNDVVWHVSWSITANIL 277
Query: 229 ASASEDGKVIIWTVAREGDQW 249
A + D KV +W + +G QW
Sbjct: 278 AVSGGDNKVTLWKESVDG-QW 297
>FB|FBgn0024509 [details] [associations]
symbol:Sec13 "Sec13 ortholog (S. cerevisiae)" species:7227
"Drosophila melanogaster" [GO:0006900 "membrane budding"
evidence=ISS] [GO:0008363 "larval chitin-based cuticle development"
evidence=IMP] [GO:0035293 "chitin-based larval cuticle pattern
formation" evidence=IMP] [GO:0010629 "negative regulation of gene
expression" evidence=IDA] [GO:0031080 "nuclear pore outer ring"
evidence=ISS] [GO:0007184 "SMAD protein import into nucleus"
evidence=IMP] [GO:0006607 "NLS-bearing substrate import into
nucleus" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0010629 GO:GO:0007184 GO:GO:0035293 EMBL:AF160909
ProteinModelPortal:Q7KLW8 STRING:Q7KLW8 PaxDb:Q7KLW8 PRIDE:Q7KLW8
FlyBase:FBgn0024509 InParanoid:Q7KLW8 OrthoDB:EOG46T1H2
ArrayExpress:Q7KLW8 Bgee:Q7KLW8 Uniprot:Q7KLW8
Length = 386
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 147/288 (51%), Positives = 195/288 (67%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAW 63
Q+I+T HED VH A+D+YG LAT SSD S++I N ++ LA+L GH+G VW+VAW
Sbjct: 36 QEIDTEHEDMVHHAALDFYGLLLATCSSDGSVRIFHSRKN-NKALAELKGHQGPVWQVAW 94
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
AHPKFG+ILASCS+D VI+WK +W K + + +H SSVNS+D+AP E GL LAC S
Sbjct: 95 AHPKFGNILASCSYDRKVIVWKSTTPRDWTKLYEYSNHDSSVNSVDFAPSEYGLVLACAS 154
Query: 124 SDGNISVFTARADGG-WDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLD---PVQKLC 179
SDG++SV T + G WD +I AH +GV ++SW P+ AP V++L
Sbjct: 155 SDGSVSVLTCNTEYGVWDAKKIPNAHTIGVNAISWCPAQAPDPAFDQRVTSRSAAVKRLV 214
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
SGGCDN VK+W+ N W + L+ H+DWVRDVAWAP++GLP+S IA+AS+D VI+
Sbjct: 215 SGGCDNLVKIWREDNDRWVEE--HRLEAHSDWVRDVAWAPSIGLPRSQIATASQDRHVIV 272
Query: 240 WTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287
W+ + +W VLH F V+ +SWS TGNILAV G+NNVTLW+E
Sbjct: 273 WSSNADLSEWTSTVLHTFDDAVWSISWSTTGNILAVTGGDNNVTLWKE 320
Score = 135 (52.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 66/262 (25%), Positives = 104/262 (39%)
Query: 9 GHEDTVHDVAMDY--YGKRLATASSDYSIKIIGVGNNTSQHLAKL---SGHKGAVWEVAW 63
GH+ V VA + +G LA+ S Y K+I + T + KL S H +V V +
Sbjct: 84 GHQGPVWQVAWAHPKFGNILASCS--YDRKVIVWKSTTPRDWTKLYEYSNHDSSVNSVDF 141
Query: 64 AHPKFGSILASCSFDGTV-IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELG------ 116
A ++G +LA S DG+V ++ W + H VN+I W P +
Sbjct: 142 APSEYGLVLACASSDGSVSVLTCNTEYGVWDAKKIPNAHTIGVNAISWCPAQAPDPAFDQ 201
Query: 117 ---------LCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV 167
L G D + ++ D + R++ AH V V+WAPS +
Sbjct: 202 RVTSRSAAVKRLVSGGCDNLVKIWREDNDRWVEEHRLE-AHSDWVRDVAWAPS------I 254
Query: 168 GSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST 227
G P ++ + D V VW N + + + +HT D W+ + +
Sbjct: 255 GL----PRSQIATASQDRHVIVWSS-NA--DLSEWTSTVLHT--FDDAVWSISWSTTGNI 305
Query: 228 IASASEDGKVIIWTVAREGDQW 249
+A D V +W EG QW
Sbjct: 306 LAVTGGDNNVTLWKENTEG-QW 326
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 46/146 (31%), Positives = 66/146 (45%)
Query: 24 KRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFG---SILASCSFDGT 80
KRL + D +KI N+ +L H V +VAWA P G S +A+ S D
Sbjct: 211 KRLVSGGCDNLVKIWREDNDRWVEEHRLEAHSDWVRDVAWA-PSIGLPRSQIATASQDRH 269
Query: 81 VIIWKEG-NSNEWIKD--HVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADG 137
VI+W + +EW H F+D +V SI W+ G LA D N++++ +G
Sbjct: 270 VIVWSSNADLSEWTSTVLHTFDD---AVWSISWST--TGNILAVTGGDNNVTLWKENTEG 324
Query: 138 GWDTSRIDQAHPVGVTSVSWAPSTAP 163
W RI+ + G S PS P
Sbjct: 325 QW--IRIN--YESGTAIQSKQPSHLP 346
>DICTYBASE|DDB_G0292052 [details] [associations]
symbol:sec13 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0030127 "COPII vesicle coat"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0005643 "nuclear pore" evidence=IEA;ISS]
[GO:0051028 "mRNA transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0012507 "ER to Golgi
transport vesicle membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292052 GenomeReviews:CM000155_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
EMBL:AAFI02000187 GO:GO:0015031 eggNOG:COG2319 GO:GO:0005643
GO:GO:0006888 GO:GO:0051028 GO:GO:0030127 KO:K14004 OMA:IKLWKEE
RefSeq:XP_629794.1 ProteinModelPortal:Q54DS8 SMR:Q54DS8
STRING:Q54DS8 PRIDE:Q54DS8 EnsemblProtists:DDB0235182
GeneID:8628472 KEGG:ddi:DDB_G0292052 ProtClustDB:CLSZ2429468
Uniprot:Q54DS8
Length = 301
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 150/290 (51%), Positives = 189/290 (65%)
Query: 1 MPPQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
M Q +++GHED VHD DYYGK LAT SSD IKI VG QHL L GH+G VW+
Sbjct: 1 MATQNVDSGHEDMVHDAQFDYYGKFLATCSSDKMIKIFDVGGENPQHLVDLRGHEGPVWQ 60
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA 120
VAWAHPKFG ILAS S+D VI+WKE +N W H + H+ SVNSI WAPHE GL LA
Sbjct: 61 VAWAHPKFGKILASASYDRKVIVWKEVGNNSWSIIHQYAGHELSVNSISWAPHEFGLSLA 120
Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSG---FLDPVQK 177
C SSDG++++ + W+ + Q +GV SVSW+P+ P +LV S P+++
Sbjct: 121 CASSDGSVTIHNYN-NNVWEAPQKIQVSQIGVNSVSWSPAAIPTSLVNSANTIIPAPIKR 179
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ +G CDN +K++K W +D L+ H DWVRDVAWAPN+GLP S IAS S+D V
Sbjct: 180 IVTGSCDNLIKIFKNVEDKWILD--KQLEDHKDWVRDVAWAPNIGLPYSKIASCSQDRSV 237
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287
I+WT G W GK L F V+RVSWS+ GNILAV+ G+N VTLW+E
Sbjct: 238 IVWTQDENG-VWSGKPLPKFDDIVWRVSWSVIGNILAVSCGDNQVTLWKE 286
>POMBASE|SPBC215.15 [details] [associations]
symbol:sec13 "COPII-coated vesicle component Sec13"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005643 "nuclear pore" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006999
"nuclear pore organization" evidence=ISO] [GO:0030127 "COPII
vesicle coat" evidence=ISO] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0071937 "barrier septum assembly involved in cell
cycle cytokinesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC215.15 GO:GO:0005829
GO:GO:0005886 GO:GO:0006886 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0005789 EMBL:CU329671 eggNOG:COG2319 GO:GO:0005643
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0051028 GO:GO:0071937
GO:GO:0030127 GO:GO:0006999 HOGENOM:HOG000216895 KO:K14004
OMA:IKLWKEE OrthoDB:EOG4QNR53 PIR:T39905 RefSeq:NP_596692.1
ProteinModelPortal:O94319 STRING:O94319 PRIDE:O94319
EnsemblFungi:SPBC215.15.1 GeneID:2540716 KEGG:spo:SPBC215.15
NextBio:20801838 Uniprot:O94319
Length = 297
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 141/290 (48%), Positives = 188/290 (64%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
++T H+D +HD +DYYGKRLAT SSD +IK+ + NN L L GH G VW++ WAH
Sbjct: 4 VDTQHDDMIHDAILDYYGKRLATCSSDQTIKVFSIENNQQTLLETLRGHSGPVWQLGWAH 63
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEW--IKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
PKFG+ILAS S+DG VI+W+E W + DH H++SVN++ WAPHE G LAC S
Sbjct: 64 PKFGTILASASYDGHVIVWRE-TGGVWSELMDHTA--HQASVNAVSWAPHEYGALLACAS 120
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGC 183
SDG +SV + DG DT RI AH G +V W+P + G++VG +KL + GC
Sbjct: 121 SDGKVSVLEFKDDGSCDT-RIFTAHEPGCNAVCWSPPSLSGSVVGQSPAAGPKKLATAGC 179
Query: 184 DNTVKVWKLYNGI--WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT 241
DN VK+W G+ W ++ L H DW RDVAWAP++GL K+ +ASAS+D V IWT
Sbjct: 180 DNLVKIWAFDAGVNNWILE--DTLAGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWT 237
Query: 242 VAREGD-QWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEA 288
+EGD W+ L + K P +RVSWSL+GNILAV+ G+N V L++E+
Sbjct: 238 --KEGDGPWQKTPLTEEKFPDIAWRVSWSLSGNILAVSCGDNKVYLFKES 285
>ASPGD|ASPL0000075365 [details] [associations]
symbol:sec13 species:162425 "Emericella nidulans"
[GO:0005643 "nuclear pore" evidence=IDA] [GO:0031081 "nuclear pore
distribution" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030127 "COPII vesicle coat" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005643
EMBL:BN001303 GO:GO:0051028 EMBL:AACD01000075 HOGENOM:HOG000216895
KO:K14004 OMA:IKLWKEE RefSeq:XP_661921.1 ProteinModelPortal:Q5B563
SMR:Q5B563 STRING:Q5B563 EnsemblFungi:CADANIAT00006147
GeneID:2872114 KEGG:ani:AN4317.2 OrthoDB:EOG4QNR53 Uniprot:Q5B563
Length = 309
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 143/291 (49%), Positives = 191/291 (65%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
+GH+D +HD +DYYG+RLAT SSD +IKI + +T + + L GH+G VW V WAHPK
Sbjct: 10 SGHDDMIHDAGLDYYGRRLATCSSDKTIKIFEIEGDTHKLVETLKGHEGPVWCVEWAHPK 69
Query: 68 FGSILASCSFDGTVIIWKEGN--------SNEWIKDHVFEDHKSSVNSIDWAPHELGLCL 119
FG+ILAS S+DG V+IW+E + S W K F H +SVN I WAPHE G L
Sbjct: 70 FGTILASSSYDGKVLIWREQHQSSTAPIGSGAWTKVFDFSLHTASVNMISWAPHETGCLL 129
Query: 120 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSG-FLDPVQKL 178
AC SSDG++SV R D W T +I AH +GV S+SWAP+ +PG+LV S + ++
Sbjct: 130 ACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSISWAPAASPGSLVSSNPGIGQQRRF 187
Query: 179 CSGGCDNTVKVWKLYNGIWKM-DCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+GG DN +K+W YN K + L+ H+DWVRDVAW+P++ L KS IASAS+D V
Sbjct: 188 VTGGSDNLLKIWD-YNPETKTYNATQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTV 245
Query: 238 IIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287
+WT A QW +VL +F ++RVSWS +GNILAV+ G+N V+LW+E
Sbjct: 246 RVWTADASNPGQWTSQVL-EFDNVLWRVSWSPSGNILAVSGGDNKVSLWKE 295
Score = 137 (53.3 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 77/275 (28%), Positives = 112/275 (40%)
Query: 6 IET--GHEDTVHDV--AMDYYGKRLATASSDYSIKI---------IGVGNNTSQHLAKLS 52
+ET GHE V V A +G LA++S D + I +G+ + S
Sbjct: 50 VETLKGHEGPVWCVEWAHPKFGTILASSSYDGKVLIWREQHQSSTAPIGSGAWTKVFDFS 109
Query: 53 GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP 112
H +V ++WA + G +LA S DG V + E N W +F H VNSI WAP
Sbjct: 110 LHTASVNMISWAPHETGCLLACASSDGHVSVL-EFRDNSWTHQ-IFHAHGMGVNSISWAP 167
Query: 113 HEL-GLCLACGSSDGNISVF-TARADGG---WD----TSRID-----QAHPVGVTSVSWA 158
G ++ G F T +D WD T + + H V V+W+
Sbjct: 168 AASPGSLVSSNPGIGQQRRFVTGGSDNLLKIWDYNPETKTYNATQTLEGHSDWVRDVAWS 227
Query: 159 PSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKL--YN-GIWKMDCFPALQMHTDWVRDV 215
PS ++ ++ S D TV+VW N G W L+ R V
Sbjct: 228 PS-----ILSKSYI------ASASQDKTVRVWTADASNPGQWTSQ---VLEFDNVLWR-V 272
Query: 216 AWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWE 250
+W+P+ G + +A + D KV +W G QWE
Sbjct: 273 SWSPS-G---NILAVSGGDNKVSLWKENLRG-QWE 302
Score = 112 (44.5 bits), Expect = 0.00064, P = 0.00064
Identities = 32/98 (32%), Positives = 50/98 (51%)
Query: 4 QKIETGHEDTVHDVAMD--YYGKR-LATASSDYSIKI-IGVGNNTSQHLAKLSGHKGAVW 59
Q +E GH D V DVA K +A+AS D ++++ +N Q +++ +W
Sbjct: 212 QTLE-GHSDWVRDVAWSPSILSKSYIASASQDKTVRVWTADASNPGQWTSQVLEFDNVLW 270
Query: 60 EVAWAHPKFGSILASCSFDGTVIIWKEGNSNEW--IKD 95
V+W+ P G+ILA D V +WKE +W +KD
Sbjct: 271 RVSWS-PS-GNILAVSGGDNKVSLWKENLRGQWEKVKD 306
>CGD|CAL0004667 [details] [associations]
symbol:SEC13 species:5476 "Candida albicans" [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0030127 "COPII
vesicle coat" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0031081 "nuclear pore
distribution" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0005643 GO:GO:0051028 EMBL:AACQ01000027
EMBL:AACQ01000026 KO:K14004 RefSeq:XP_720011.1 RefSeq:XP_720143.1
ProteinModelPortal:Q5AEF2 SMR:Q5AEF2 STRING:Q5AEF2 GeneID:3638207
GeneID:3638425 KEGG:cal:CaO19.316 KEGG:cal:CaO19.7948
Uniprot:Q5AEF2
Length = 298
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 140/290 (48%), Positives = 188/290 (64%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAWA 64
I H+D +HD +DYYGKRLAT SSD +IKI + G + + + L+GH+G VW+V+WA
Sbjct: 4 IGNAHDDLIHDAVLDYYGKRLATCSSDKTIKIFDLDGTDNYKLITTLTGHEGPVWQVSWA 63
Query: 65 HPKFGSILASCSFDGTVIIWKEG-NSNEW--IKDHVFEDHKSSVNSIDWAPHELGLCLAC 121
HPKFGSILASCS+DG +IWKE + +W I +H H++SVNS+ WAPHELG L C
Sbjct: 64 HPKFGSILASCSYDGKALIWKEQPETQQWSIIAEHTV--HQASVNSVSWAPHELGAVLLC 121
Query: 122 GSSDGNISVFTARADGGWDTSR-IDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
SSDG +SV DG TS I AH +G S +WAP + S L +++ S
Sbjct: 122 TSSDGKVSVVDFNDDG--TTSHVIFDAHAIGANSATWAPVSTSSK--DSAALKQQRRIVS 177
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPA-LQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
G DN K+WK Y+ A L+ HTDWVRDVAW+P+ L +S IA+AS+D V+I
Sbjct: 178 CGSDNLAKIWK-YDAANNTYVEEAKLEGHTDWVRDVAWSPS-NLIRSYIATASQDRTVLI 235
Query: 240 WTVAREGDQWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEE 287
WT R+G +W+ ++L + K P +R SWSL+GNILAV+ G+N V+LW+E
Sbjct: 236 WTQDRDG-KWQKQLLTEEKFPDVCWRCSWSLSGNILAVSGGDNKVSLWKE 284
Score = 148 (57.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 66/260 (25%), Positives = 111/260 (42%)
Query: 8 TGHEDTVHDVAMDY--YGKRLATASSDYSIKIIGVGNNTSQH--LAKLSGHKGAVWEVAW 63
TGHE V V+ + +G LA+ S D I T Q +A+ + H+ +V V+W
Sbjct: 51 TGHEGPVWQVSWAHPKFGSILASCSYDGKALIWKEQPETQQWSIIAEHTVHQASVNSVSW 110
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP------HELGL 117
A + G++L S DG V + + N + +F+ H NS WAP L
Sbjct: 111 APHELGAVLLCTSSDGKVSV-VDFNDDGTTSHVIFDAHAIGANSATWAPVSTSSKDSAAL 169
Query: 118 -----CLACGSSD-GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGF 171
++CGS + I + A + + ++++ H V V+W+PS L+ S
Sbjct: 170 KQQRRIVSCGSDNLAKIWKYDAANNTYVEEAKLE-GHTDWVRDVAWSPSN----LIRS-- 222
Query: 172 LDPVQKLCSGGCDNTVKVWKL-YNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
+ + D TV +W +G W+ + + DV W + L + +A
Sbjct: 223 -----YIATASQDRTVLIWTQDRDGKWQKQL-----LTEEKFPDVCWRCSWSLSGNILAV 272
Query: 231 ASEDGKVIIWTVAREGDQWE 250
+ D KV +W +G +WE
Sbjct: 273 SGGDNKVSLWKENLQG-KWE 291
Score = 137 (53.3 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 24 KRLATASSDYSIKI--IGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF-GSILASCSFDGT 80
+R+ + SD KI NNT AKL GH V +VAW+ S +A+ S D T
Sbjct: 173 RRIVSCGSDNLAKIWKYDAANNTYVEEAKLEGHTDWVRDVAWSPSNLIRSYIATASQDRT 232
Query: 81 VIIWKEGNSNEWIKDHVFEDHKSSVN-SIDWAPHELGLCLACGSSDGNISVFTARADGGW 139
V+IW + +W K + E+ V W+ G LA D +S++ G W
Sbjct: 233 VLIWTQDRDGKWQKQLLTEEKFPDVCWRCSWSLS--GNILAVSGGDNKVSLWKENLQGKW 290
Query: 140 DTS-RIDQ 146
+++ +DQ
Sbjct: 291 ESAGEVDQ 298
>SGD|S000004198 [details] [associations]
symbol:SEC13 "Structural component of 3 distinct complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP] [GO:0031080 "nuclear pore
outer ring" evidence=IDA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IMP] [GO:0030127 "COPII vesicle coat"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=IDA;IMP] [GO:0005773 "vacuole" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0043547 "positive regulation of GTPase activity" evidence=IDA]
[GO:0035859 "Seh1-associated complex" evidence=IDA] [GO:0031081
"nuclear pore distribution" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004198 GO:GO:0005774
GO:GO:0045893 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0043547 GO:GO:0005198 GO:GO:0015031 eggNOG:COG2319
EMBL:BK006945 GO:GO:0030433 GO:GO:0051028 EMBL:U14913 GO:GO:0030127
GO:GO:0031080 GO:GO:0031081 GO:GO:0035859 PDB:3IKO PDBsum:3IKO
PDB:3JRO PDBsum:3JRO GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE OrthoDB:EOG4QNR53
EMBL:L05929 PIR:A45442 RefSeq:NP_013309.1 PDB:2PM6 PDB:2PM7
PDB:2PM9 PDB:3JRP PDB:3MZK PDB:3MZL PDBsum:2PM6 PDBsum:2PM7
PDBsum:2PM9 PDBsum:3JRP PDBsum:3MZK PDBsum:3MZL
ProteinModelPortal:Q04491 SMR:Q04491 DIP:DIP-1826N IntAct:Q04491
MINT:MINT-402427 STRING:Q04491 PaxDb:Q04491 PeptideAtlas:Q04491
EnsemblFungi:YLR208W GeneID:850905 KEGG:sce:YLR208W CYGD:YLR208w
EvolutionaryTrace:Q04491 NextBio:967299 Genevestigator:Q04491
GermOnline:YLR208W GO:GO:0090114 Uniprot:Q04491
Length = 297
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 136/285 (47%), Positives = 180/285 (63%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
I H + +HD +DYYGKRLAT SSD +IKI V T + + L+GH+G VW V WAH
Sbjct: 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAH 63
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
PKFG+ILASCS+DG V+IWKE N W + V H +SVNS+ WAPHE G L SSD
Sbjct: 64 PKFGTILASCSYDGKVLIWKEENGR-WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD 122
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDN 185
G +SV + +G ID AH +GV S SWAP+T +G + +K +GG DN
Sbjct: 123 GKVSVVEFKENGTTSPIIID-AHAIGVNSASWAPATIEEDGEHNGTKES-RKFVTGGADN 180
Query: 186 TVKVWKLYNGIWKMDCFPA-LQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAR 244
VK+WK YN + + L+ H+DWVRDVAW+P + L +S +AS S+D IIWT
Sbjct: 181 LVKIWK-YNSDAQTYVLESTLEGHSDWVRDVAWSPTV-LLRSYLASVSQDRTCIIWTQDN 238
Query: 245 EGDQWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEE 287
E W+ +L + K P ++R SWSL+GN+LA++ G+N VTLW+E
Sbjct: 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283
Score = 154 (59.3 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 70/261 (26%), Positives = 107/261 (40%)
Query: 8 TGHEDTVH--DVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
TGHE V D A +G LA+ S D + I N +A + H +V V WA
Sbjct: 50 TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP 109
Query: 66 PKFGSILASCSFDG--TVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP---HELG---- 116
++G +L S DG +V+ +KE + I + + H VNS WAP E G
Sbjct: 110 HEYGPLLLVASSDGKVSVVEFKENGTTSPI---IIDAHAIGVNSASWAPATIEEDGEHNG 166
Query: 117 ----LCLACGSSDGNISVFTARADGG-WDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGF 171
G +D + ++ +D + + H V V+W+P+ L+ S +
Sbjct: 167 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV----LLRS-Y 221
Query: 172 LDPVQKLCSGGCDNTVKVWKLYN--GIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIA 229
L V + D T +W N G WK + + DV W + L + +A
Sbjct: 222 LASVSQ------DRTCIIWTQDNEQGPWKKTL-----LKEEKFPDVLWRASWSLSGNVLA 270
Query: 230 SASEDGKVIIWTVAREGDQWE 250
+ D KV +W EG +WE
Sbjct: 271 LSGGDNKVTLWKENLEG-KWE 290
>UNIPROTKB|A8XJ40 [details] [associations]
symbol:npp-20 "Protein SEC13 homolog" species:6238
"Caenorhabditis briggsae" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0005643 "nuclear pore" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0005643 GO:GO:0000910
GO:GO:0051028 HOGENOM:HOG000216895 EMBL:HE601467
ProteinModelPortal:A8XJ40 STRING:A8XJ40 EnsemblMetazoa:CBG13889
WormBase:CBG13889 Uniprot:A8XJ40
Length = 306
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 119/288 (41%), Positives = 168/288 (58%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVG-NNTSQHLAKLSGHKGAVWEVA 62
Q+I+T H D +HD ++ YG RLAT SD +KI V N S L +LSGH G VW+V+
Sbjct: 6 QRIDTQHRDAIHDAQLNIYGNRLATCGSDRLVKIFEVRPNGQSYPLIELSGHNGPVWKVS 65
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACG 122
WAHPK+G +LAS S+D VIIW+E N W K + +E H++SV S+ +APH+ GL LA
Sbjct: 66 WAHPKYGGLLASASYDKKVIIWQEVNGR-WQKTYEWETHEASVTSVAFAPHQFGLMLASS 124
Query: 123 SSDGNISV--FTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
S+DG I + F A+ W +SRI H GV SVSWAP TA A G ++ S
Sbjct: 125 SADGTIGILRFDAQTQQ-WQSSRIQNCHDQGVNSVSWAPGTADPA--GK------KRFVS 175
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
G D VK+W L + + C A+ H D+VR+ AW P + +I S DG ++++
Sbjct: 176 AGNDKLVKIWLLNEELNEWTCEKAIHCHKDFVREAAWCPVTNKGQHSIVSCGLDGNLVLY 235
Query: 241 TVAR-EGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287
+A E +W+ K+L +Y S+S G+ L+V+ +N +TLW E
Sbjct: 236 RIADIETAEWKSKLLEQAPCALYHASFSPCGSFLSVSGDDNMITLWRE 283
>UNIPROTKB|E3NCB9 [details] [associations]
symbol:Cre-npp-20 "CRE-NPP-20 protein" species:31234
"Caenorhabditis remanei" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0005643 "nuclear pore" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005643 GO:GO:0000910 OMA:IKLWKEE EMBL:DS268594
RefSeq:XP_003093969.1 ProteinModelPortal:E3NCB9
EnsemblMetazoa:CRE15709 GeneID:9811680 CTD:9811680 Uniprot:E3NCB9
Length = 311
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 115/291 (39%), Positives = 167/291 (57%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVG-NNTSQHLAKLSGHKGAVWEVA 62
Q+I+T H D +HD ++ YG RLAT SD +KI V N S L +LSGH G VW+V+
Sbjct: 6 QRIDTQHRDAIHDAQLNIYGNRLATCGSDRLVKIFEVRPNGQSYPLIELSGHNGPVWKVS 65
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACG 122
WAHPK+G +LAS ++D VIIW+E N W K + + H++S S+ +APH+ GL LA
Sbjct: 66 WAHPKYGGLLASAAYDKKVIIWQEINGR-WQKSYEWACHEASTTSVAFAPHQYGLWLASS 124
Query: 123 SSDGNISVFTARA-DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LC 179
S+DG+I + + G W +S+I + H GV SVSWAP +A DP K L
Sbjct: 125 SADGDIGILRYDSVTGQWQSSKIQKCHEQGVNSVSWAPGSA----------DPTAKKRLV 174
Query: 180 SGGCDNTVKVWKLY--NGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
S G D K+W NG W+ L HTD+VR+ AW P + +I S +G +
Sbjct: 175 SAGNDKCAKIWVFQQTNGFWRK----LLNGHTDFVREAAWCPVTNKGQHSIVSCGLEGNL 230
Query: 238 IIWTVAR-EGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287
+++ + E D+W+ K+L P+Y S+S G+ L+V+ +N +T+W E
Sbjct: 231 VLYRNSNIETDEWKSKLLEKSPCPLYHASFSPCGSFLSVSGDDNMITIWRE 281
>WB|WBGene00003806 [details] [associations]
symbol:npp-20 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0032940
"secretion by cell" evidence=IMP] [GO:0006997 "nucleus
organization" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0012507 GO:GO:0002119
GO:GO:0032940 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0010171 GO:GO:0040011
GO:GO:0000003 GO:GO:0005643 GO:GO:0000910 GO:GO:0051028
GO:GO:0006997 GO:GO:0051169 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:FO081581
RefSeq:NP_500086.1 RefSeq:NP_500087.1 ProteinModelPortal:Q9N4A7
SMR:Q9N4A7 DIP:DIP-25859N IntAct:Q9N4A7 MINT:MINT-1089120
STRING:Q9N4A7 PaxDb:Q9N4A7 PRIDE:Q9N4A7 EnsemblMetazoa:Y77E11A.13a
GeneID:176957 KEGG:cel:CELE_Y77E11A.13 UCSC:Y77E11A.13b CTD:176957
WormBase:Y77E11A.13a WormBase:Y77E11A.13b InParanoid:Q9N4A7
NextBio:894734 ArrayExpress:Q9N4A7 Uniprot:Q9N4A7
Length = 313
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 110/291 (37%), Positives = 162/291 (55%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVG-NNTSQHLAKLSGHKGAVWEVA 62
Q+I+T H D +HD ++ YG RLAT SD +KI V N S +A+L GH G VW+V+
Sbjct: 6 QRIDTQHRDAIHDAQLNIYGSRLATCGSDRLVKIFEVRPNGQSYPMAELVGHSGPVWKVS 65
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACG 122
WAHPK+G +LAS S+D VIIW E W K + + H++S + +APH+ GL LA
Sbjct: 66 WAHPKYGGLLASASYDKKVIIWNE-QQGRWQKAYEWAAHEASTTCVAFAPHQYGLMLASA 124
Query: 123 SSDGNISVFTA-RADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LC 179
S+DG+I + + W +S+I + H GV SV WAP +A DP K L
Sbjct: 125 SADGDIGILRYDNSSNEWISSKIQKCHEQGVNSVCWAPGSA----------DPAAKKRLV 174
Query: 180 SGGCDNTVKVWKLYNGI--WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
S G D VK+W + W ++ L HTD+VR+ AW P + TI S +G +
Sbjct: 175 SAGNDKNVKIWAFDDATNEWILE--KTLAGHTDFVREAAWCPVTNNGQHTIVSCGMEGNL 232
Query: 238 IIWTVAR-EGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287
+++ + E ++W+ K+L +Y S+S G+ L+VA +N +T+W E
Sbjct: 233 VLFRTSNIETEEWKAKLLETAPCALYHSSFSPCGSFLSVAGDDNVITIWRE 283
Score = 113 (44.8 bits), Expect = 0.00050, P = 0.00050
Identities = 42/167 (25%), Positives = 74/167 (44%)
Query: 5 KIETGHEDTVHDV-----AMDYYGK-RLATASSDYSIKIIGVGNNTSQHLAK--LSGHKG 56
KI+ HE V+ V + D K RL +A +D ++KI + T++ + + L+GH
Sbjct: 146 KIQKCHEQGVNSVCWAPGSADPAAKKRLVSAGNDKNVKIWAFDDATNEWILEKTLAGHTD 205
Query: 57 AVWEVAWAH-PKFGS-ILASCSFDGTVIIWKEGN--SNEWIKDHVFEDHKSSVNSIDWAP 112
V E AW G + SC +G +++++ N + EW K + E ++ ++P
Sbjct: 206 FVREAAWCPVTNNGQHTIVSCGMEGNLVLFRTSNIETEEW-KAKLLETAPCALYHSSFSP 264
Query: 113 HELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 159
G L+ D I+++ G W D G++ AP
Sbjct: 265 --CGSFLSVAGDDNVITIWRENLQGQWIKVPRDNKEREGMSQAVGAP 309
>UNIPROTKB|Q9N4A7 [details] [associations]
symbol:npp-20 "Protein SEC13 homolog" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051169 "nuclear transport" evidence=IC]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0005643 "nuclear pore"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0012507 GO:GO:0002119
GO:GO:0032940 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0010171 GO:GO:0040011
GO:GO:0000003 GO:GO:0005643 GO:GO:0000910 GO:GO:0051028
GO:GO:0006997 GO:GO:0051169 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:FO081581
RefSeq:NP_500086.1 RefSeq:NP_500087.1 ProteinModelPortal:Q9N4A7
SMR:Q9N4A7 DIP:DIP-25859N IntAct:Q9N4A7 MINT:MINT-1089120
STRING:Q9N4A7 PaxDb:Q9N4A7 PRIDE:Q9N4A7 EnsemblMetazoa:Y77E11A.13a
GeneID:176957 KEGG:cel:CELE_Y77E11A.13 UCSC:Y77E11A.13b CTD:176957
WormBase:Y77E11A.13a WormBase:Y77E11A.13b InParanoid:Q9N4A7
NextBio:894734 ArrayExpress:Q9N4A7 Uniprot:Q9N4A7
Length = 313
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 110/291 (37%), Positives = 162/291 (55%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVG-NNTSQHLAKLSGHKGAVWEVA 62
Q+I+T H D +HD ++ YG RLAT SD +KI V N S +A+L GH G VW+V+
Sbjct: 6 QRIDTQHRDAIHDAQLNIYGSRLATCGSDRLVKIFEVRPNGQSYPMAELVGHSGPVWKVS 65
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACG 122
WAHPK+G +LAS S+D VIIW E W K + + H++S + +APH+ GL LA
Sbjct: 66 WAHPKYGGLLASASYDKKVIIWNE-QQGRWQKAYEWAAHEASTTCVAFAPHQYGLMLASA 124
Query: 123 SSDGNISVFTA-RADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LC 179
S+DG+I + + W +S+I + H GV SV WAP +A DP K L
Sbjct: 125 SADGDIGILRYDNSSNEWISSKIQKCHEQGVNSVCWAPGSA----------DPAAKKRLV 174
Query: 180 SGGCDNTVKVWKLYNGI--WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
S G D VK+W + W ++ L HTD+VR+ AW P + TI S +G +
Sbjct: 175 SAGNDKNVKIWAFDDATNEWILE--KTLAGHTDFVREAAWCPVTNNGQHTIVSCGMEGNL 232
Query: 238 IIWTVAR-EGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287
+++ + E ++W+ K+L +Y S+S G+ L+VA +N +T+W E
Sbjct: 233 VLFRTSNIETEEWKAKLLETAPCALYHSSFSPCGSFLSVAGDDNVITIWRE 283
Score = 113 (44.8 bits), Expect = 0.00050, P = 0.00050
Identities = 42/167 (25%), Positives = 74/167 (44%)
Query: 5 KIETGHEDTVHDV-----AMDYYGK-RLATASSDYSIKIIGVGNNTSQHLAK--LSGHKG 56
KI+ HE V+ V + D K RL +A +D ++KI + T++ + + L+GH
Sbjct: 146 KIQKCHEQGVNSVCWAPGSADPAAKKRLVSAGNDKNVKIWAFDDATNEWILEKTLAGHTD 205
Query: 57 AVWEVAWAH-PKFGS-ILASCSFDGTVIIWKEGN--SNEWIKDHVFEDHKSSVNSIDWAP 112
V E AW G + SC +G +++++ N + EW K + E ++ ++P
Sbjct: 206 FVREAAWCPVTNNGQHTIVSCGMEGNLVLFRTSNIETEEW-KAKLLETAPCALYHSSFSP 264
Query: 113 HELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 159
G L+ D I+++ G W D G++ AP
Sbjct: 265 --CGSFLSVAGDDNVITIWRENLQGQWIKVPRDNKEREGMSQAVGAP 309
>DICTYBASE|DDB_G0277257 [details] [associations]
symbol:DDB_G0277257 "Nucleoporin SEH1" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277257 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAFI02000019 KO:K14299 RefSeq:XP_642765.1
ProteinModelPortal:Q86K39 STRING:Q86K39 EnsemblProtists:DDB0169145
GeneID:8620954 KEGG:ddi:DDB_G0277257 InParanoid:Q86K39 OMA:TELEDHI
Uniprot:Q86K39
Length = 467
Score = 327 (120.2 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
Identities = 72/195 (36%), Positives = 105/195 (53%)
Query: 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHL-AKLSGHKGAVWEVAW 63
++ T H+D +HDV+ D+YGKRLAT SSD IK+ +N L A+ H G+VW++AW
Sbjct: 6 RLSTAHDDLIHDVSYDFYGKRLATCSSDQKIKVWDQNDNQKWELSAEWKAHSGSVWKLAW 65
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNE----W-IKDHVFEDHKSSVNSIDWAPHELGLC 118
AHP++G ++ASCSFD TV IW+E + W +K H+ D + SV I +AP GL
Sbjct: 66 AHPEYGQVIASCSFDRTVCIWEESEDEKGQKKWQLKAHLV-DSRDSVTDIKFAPKSFGLR 124
Query: 119 LACGSSDGNISVFTARAD---GGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPV 175
LA SSDG I ++ A W ++ +SW PS+ ++ G +P
Sbjct: 125 LATCSSDGYIRIYEAMDIMNLSQWTIVEEFESQKGTSNCISWNPSSYDKPMIAVGSNEPY 184
Query: 176 QKLCSGGCDNTVKVW 190
K+ T + W
Sbjct: 185 IKIWE--YSETARKW 197
Score = 163 (62.4 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
Identities = 39/109 (35%), Positives = 63/109 (57%)
Query: 182 GCDNTVKVWKLYNGIWKMDCFPALQMH-TDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
G ++++ V N I+ + F + + + DV WAPN+G IA+AS+D KV IW
Sbjct: 334 GANSSINVSSGNNSIYSNNNFDSSSDGGSRAIHDVCWAPNMGRSYHLIATASKDHKVRIW 393
Query: 241 TVAREGDQWEGK-VLH--DFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
++ + + E K V+ D K+ V+RV W++TG ILA + + NV LW+
Sbjct: 394 KLSSDKSKMELKEVMRKDDHKSEVWRVEWNITGTILASSGDDGNVCLWK 442
Score = 113 (44.8 bits), Expect = 0.00098, P = 0.00098
Identities = 32/109 (29%), Positives = 51/109 (46%)
Query: 9 GHEDTVHDVAM-DYYGKR---LATASSDYSIKIIGVGNNTSQ----HLAKLSGHKGAVWE 60
G +HDV G+ +ATAS D+ ++I + ++ S+ + + HK VW
Sbjct: 360 GGSRAIHDVCWAPNMGRSYHLIATASKDHKVRIWKLSSDKSKMELKEVMRKDDHKSEVWR 419
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSID 109
V W G+ILAS DG V +WK + EW + +S+ + D
Sbjct: 420 VEWNIT--GTILASSGDDGNVCLWKCNMNGEWKLFSLISGEESTEDKYD 466
>UNIPROTKB|F1SQA9 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005635 "nuclear envelope" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005635 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 GeneTree:ENSGT00550000075049 EMBL:CU469341
Ensembl:ENSSSCT00000012664 OMA:REISADH Uniprot:F1SQA9
Length = 158
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 83/145 (57%), Positives = 99/145 (68%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAH
Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAH 67
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
P +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSD
Sbjct: 68 PMYGNILASCSYDRKVIIWKEENGT-WEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSD 126
Query: 126 GNISVFTARADGGWDTSRIDQAHPV 150
G IS+ T G W+ +I+ AH V
Sbjct: 127 GAISLLTYTGLGQWEVKKINNAHTV 151
Score = 104 (41.7 bits), Expect = 0.00053, P = 0.00053
Identities = 45/145 (31%), Positives = 62/145 (42%)
Query: 116 GLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPV 175
G LA SSD ++ +F R +GG + H V V+WA G ++ S
Sbjct: 25 GTRLATCSSDRSVKIFDVR-NGGQILIADLRGHEGPVWQVAWAHPMY-GNILAS------ 76
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPN-LGLPKSTIASASED 234
CS D V +WK NG W+ H V V WAP+ GL +A S D
Sbjct: 77 ---CS--YDRKVIIWKEENGTWEKT--HEHTGHDSSVNSVCWAPHDYGL---ILACGSSD 126
Query: 235 GKVIIWTVAREGDQWEGKVLHDFKT 259
G + + T G QWE K +++ T
Sbjct: 127 GAISLLTYTGLG-QWEVKKINNAHT 150
Score = 103 (41.3 bits), Expect = 0.00072, P = 0.00072
Identities = 32/107 (29%), Positives = 48/107 (44%)
Query: 68 FGSILASCSFDGTVIIWKEGNSNE-WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG 126
+G+ LA+CS D +V I+ N + I D H+ V + WA G LA S D
Sbjct: 24 YGTRLATCSSDRSVKIFDVRNGGQILIAD--LRGHEGPVWQVAWAHPMYGNILASCSYDR 81
Query: 127 NISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLD 173
+ ++ +G W+ + H V SV WAP G ++ G D
Sbjct: 82 KVIIWKEE-NGTWEKTHEHTGHDSSVNSVCWAPHDY-GLILACGSSD 126
>UNIPROTKB|E1BYP7 [details] [associations]
symbol:SEH1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0006999
"nuclear pore organization" evidence=IEA] [GO:0007080 "mitotic
metaphase plate congression" evidence=IEA] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051315
GO:GO:0007080 GO:GO:0006999 CTD:81929 KO:K14299
GeneTree:ENSGT00550000074999 OMA:YEAPDIM EMBL:AADN02058864
IPI:IPI00575685 RefSeq:XP_003640847.1 Ensembl:ENSGALT00000022497
GeneID:100859886 KEGG:gga:100859886 Uniprot:E1BYP7
Length = 419
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 84/250 (33%), Positives = 130/250 (52%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHL-AKLSGHKGAVWEVA 62
+ I H D +HDV+ D++G+R+AT SSD S+K+ N H A H G+VW V
Sbjct: 5 RSIAADHRDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENGDWHCTASWKTHSGSVWRVT 64
Query: 63 WAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPH 113
WAHP+FG +LASCSFD T +W+E G SN+ W+K D ++SV + +AP
Sbjct: 65 WAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPK 124
Query: 114 ELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGV----TSVSWAPST--APGALV 167
+GL LA S+DG + ++ A + S+ H + + +SW PS+ A ++
Sbjct: 125 HMGLMLATCSADGVVRIY--EAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSPMI 182
Query: 168 GSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST 227
G D + + V++++ K AL TD V D+A+APNLG
Sbjct: 183 AVGSDDNSPNILA-----KVQIYEYNENTRKYAKAEALMTVTDPVHDIAFAPNLGRSFHI 237
Query: 228 IASASEDGKV 237
+A A++D ++
Sbjct: 238 LAVATKDVRI 247
Score = 175 (66.7 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 59/216 (27%), Positives = 104/216 (48%)
Query: 87 GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQ 146
G S+ W+K D ++SV + +AP +GL LA S+DG + ++ A + S+
Sbjct: 99 GQSH-WVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIY--EAPDVMNLSQWSL 155
Query: 147 AHPVGV----TSVSWAPST--APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMD 200
H + + +SW PS+ A ++ G D + + V++++ K
Sbjct: 156 QHEISCKLSCSCISWNPSSSRAHSPMIAVGSDDNSPNILA-----KVQIYEYNENTRKYA 210
Query: 201 CFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE------G-DQWEGKV 253
AL TD V D+A+APNLG +A A++D ++ R+ G ++E +
Sbjct: 211 KAEALMTVTDPVHDIAFAPNLGRSFHILAVATKDVRIFTLKPLRKELTSSGGLTKFEIHI 270
Query: 254 LHDF---KTPVYRVSWSLTGNILAVADGNNNVTLWE 286
+ F + V+RVSW++TG +LA + + V LW+
Sbjct: 271 VAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWK 306
>ZFIN|ZDB-GENE-030131-6689 [details] [associations]
symbol:seh1l "SEH1-like (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0051315 "attachment of spindle microtubules to kinetochore
involved in mitotic sister chromatid segregation" evidence=ISS]
[GO:0000776 "kinetochore" evidence=IEA;ISS] [GO:0007080 "mitotic
metaphase plate congression" evidence=ISS] [GO:0031080 "nuclear
pore outer ring" evidence=ISS] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-6689 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0051028 GO:GO:0051315 GO:GO:0000777
GO:GO:0007080 GO:GO:0031080 GO:GO:0006999 EMBL:BX294130 CTD:81929
KO:K14299 eggNOG:NOG257251 GeneTree:ENSGT00550000074999
HOGENOM:HOG000216896 EMBL:AY398414 IPI:IPI00499010
RefSeq:NP_956217.2 UniGene:Dr.20191 ProteinModelPortal:Q6TGU2
STRING:Q6TGU2 Ensembl:ENSDART00000013865 GeneID:334749
KEGG:dre:334749 InParanoid:Q6TGU2 NextBio:20810534
ArrayExpress:Q6TGU2 Bgee:Q6TGU2 Uniprot:Q6TGU2
Length = 364
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 93/292 (31%), Positives = 149/292 (51%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHL-AKLSGHKGAVWEVA 62
+ I H+D +HDV+ D++G+R+AT SSD S+K+ G++ H A H G+VW V
Sbjct: 5 KSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKGDDGEWHCTASWKTHSGSVWRVT 64
Query: 63 WAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPH 113
WAHP+FG +LASCSFD T +W+E G SN+ WIK D ++SV + +AP
Sbjct: 65 WAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVKFAPK 124
Query: 114 ELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGV----TSVSWAPST--APGALV 167
+GL L S+DG + ++ A + S+ H + + +SW PS+ A ++
Sbjct: 125 HMGLMLTTCSADGVVRIY--EAPDVMNLSQWSLQHEISCKLACSCISWNPSSSRAHPPMI 182
Query: 168 GSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST 227
G D +G V++ + K L TD V D+A+APNLG
Sbjct: 183 AVGGDDS-----NGAYSGKVQIHEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHV 237
Query: 228 IASASEDGKVI-IWTVAREG------DQWEGKVLHDFKTPVYRVSWSLTGNI 272
+A A++D ++ + + RE ++E +V+ F + +V W ++ NI
Sbjct: 238 LAIATKDVRIFKLLPLRRESANSSGPTKFEVQVMAQFDSHNSQV-WRVSWNI 288
Score = 175 (66.7 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 58/218 (26%), Positives = 102/218 (46%)
Query: 85 KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRI 144
K+ + WIK D ++SV + +AP +GL L S+DG + ++ A + S+
Sbjct: 96 KQRGQSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIY--EAPDVMNLSQW 153
Query: 145 DQAHPVGV----TSVSWAPST--APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWK 198
H + + +SW PS+ A ++ G D +G V++ + K
Sbjct: 154 SLQHEISCKLACSCISWNPSSSRAHPPMIAVGGDDS-----NGAYSGKVQIHEYNENTRK 208
Query: 199 MDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVI-IWTVAREG------DQWEG 251
L TD V D+A+APNLG +A A++D ++ + + RE ++E
Sbjct: 209 YAKAETLMTVTDPVHDIAFAPNLGRSFHVLAIATKDVRIFKLLPLRRESANSSGPTKFEV 268
Query: 252 KVLHDF---KTPVYRVSWSLTGNILAVADGNNNVTLWE 286
+V+ F + V+RVSW++T +LA + + V LW+
Sbjct: 269 QVMAQFDSHNSQVWRVSWNITSTLLASSGDDGCVRLWK 306
>UNIPROTKB|Q6GNF1 [details] [associations]
symbol:seh1l-b "Nucleoporin seh1-B" species:8355 "Xenopus
laevis" [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0007080 "mitotic metaphase plate congression" evidence=ISS]
[GO:0031080 "nuclear pore outer ring" evidence=ISS] [GO:0051315
"attachment of spindle microtubules to kinetochore involved in
mitotic sister chromatid segregation" evidence=ISS] [GO:0000776
"kinetochore" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 EMBL:BC073561 RefSeq:NP_001085936.1
UniGene:Xl.3340 ProteinModelPortal:Q6GNF1 GeneID:444365
KEGG:xla:444365 Uniprot:Q6GNF1
Length = 360
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 82/250 (32%), Positives = 130/250 (52%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHL-AKLSGHKGAVWEVA 62
+ I H+D +HDV+ D++G+R+AT SSD S+K+ N + H A H G+VW V
Sbjct: 5 RSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENVNWHCTASWKTHSGSVWRVT 64
Query: 63 WAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPH 113
WAHP+FG +LASCSFD T +W+E G SN+ W+K D ++SV + +AP
Sbjct: 65 WAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPK 124
Query: 114 ELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGV----TSVSWAPST--APGALV 167
+GL LA S+DG + ++ A + S+ H + + +SW PS+ A ++
Sbjct: 125 HMGLMLATCSADGVVRIY--EAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSPMI 182
Query: 168 GSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST 227
G D + V++++ K L +D V D+A+APNLG
Sbjct: 183 AVGSDDSSPNIMG-----KVQIYEYNENTRKYAKAETLMSVSDPVHDIAFAPNLGRSFHI 237
Query: 228 IASASEDGKV 237
+A A++D ++
Sbjct: 238 LAVATKDVRI 247
Score = 172 (65.6 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 57/216 (26%), Positives = 101/216 (46%)
Query: 87 GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQ 146
G S+ W+K D ++SV + +AP +GL LA S+DG + ++ A + S+
Sbjct: 99 GQSH-WVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIY--EAPDVMNLSQWSL 155
Query: 147 AHPVGV----TSVSWAPST--APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMD 200
H + + +SW PS+ A ++ G D + V++++ K
Sbjct: 156 QHEISCKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNIMG-----KVQIYEYNENTRKYA 210
Query: 201 CFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE------G-DQWEGKV 253
L +D V D+A+APNLG +A A++D ++ R+ G ++E
Sbjct: 211 KAETLMSVSDPVHDIAFAPNLGRSFHILAVATKDVRIFTMKPLRKELSSSGGVTKFENHT 270
Query: 254 LHDF---KTPVYRVSWSLTGNILAVADGNNNVTLWE 286
+ F + V+RVSW++TG +LA + + V LW+
Sbjct: 271 VAQFDNHNSQVWRVSWNITGTVLASSGDDGTVRLWK 306
>UNIPROTKB|Q4FZW5 [details] [associations]
symbol:seh1l-a "Nucleoporin seh1-A" species:8355 "Xenopus
laevis" [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0007080 "mitotic metaphase plate congression" evidence=ISS]
[GO:0031080 "nuclear pore outer ring" evidence=ISS] [GO:0051315
"attachment of spindle microtubules to kinetochore involved in
mitotic sister chromatid segregation" evidence=ISS] [GO:0000776
"kinetochore" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 EMBL:BC099027 RefSeq:NP_001089593.1
UniGene:Xl.47439 ProteinModelPortal:Q4FZW5 GeneID:734650
KEGG:xla:734650 CTD:81929 Xenbase:XB-GENE-1015667 KO:K14299
Uniprot:Q4FZW5
Length = 360
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 82/250 (32%), Positives = 130/250 (52%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHL-AKLSGHKGAVWEVA 62
+ I H+D +HDV+ D++G+R+AT SSD S+K+ N + H A H G+VW V
Sbjct: 5 RSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENGNWHCTASWKTHSGSVWRVT 64
Query: 63 WAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPH 113
WAHP+FG +LASCSFD T +W+E G SN+ W+K D ++SV + +AP
Sbjct: 65 WAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPK 124
Query: 114 ELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGV----TSVSWAPST--APGALV 167
+GL LA S+DG + ++ A + S+ H + + +SW PS+ A ++
Sbjct: 125 HMGLMLATCSADGVVRIY--EAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSPMI 182
Query: 168 GSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST 227
G D + V++++ K L +D V D+A+APNLG
Sbjct: 183 AVGSDDSSPNIMG-----KVQIYEYNENTRKYAKAETLMSVSDPVHDIAFAPNLGRSFHI 237
Query: 228 IASASEDGKV 237
+A A++D ++
Sbjct: 238 LAVATKDVRI 247
Score = 172 (65.6 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 57/216 (26%), Positives = 100/216 (46%)
Query: 87 GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQ 146
G S+ W+K D ++SV + +AP +GL LA S+DG + ++ A + S+
Sbjct: 99 GQSH-WVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIY--EAPDVMNLSQWSL 155
Query: 147 AHPVGV----TSVSWAPST--APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMD 200
H + + +SW PS+ A ++ G D + V++++ K
Sbjct: 156 QHEISCKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNIMG-----KVQIYEYNENTRKYA 210
Query: 201 CFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKV----LH- 255
L +D V D+A+APNLG +A A++D ++ R+ G V +H
Sbjct: 211 KAETLMSVSDPVHDIAFAPNLGRSFHILAVATKDVRIFTMKPLRKELSSSGGVTKFEIHT 270
Query: 256 -----DFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
+ + V+RVSW++TG +LA + + V LW+
Sbjct: 271 VAQFDNHNSQVWRVSWNITGTVLASSGDDGTVRLWK 306
>UNIPROTKB|C1BK83 [details] [associations]
symbol:seh1l "Nucleoporin seh1" species:8014 "Osmerus
mordax" [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0007080 "mitotic metaphase plate congression" evidence=ISS]
[GO:0031080 "nuclear pore outer ring" evidence=ISS] [GO:0051315
"attachment of spindle microtubules to kinetochore involved in
mitotic sister chromatid segregation" evidence=ISS] [GO:0000776
"kinetochore" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 EMBL:BT075012 ProteinModelPortal:C1BK83
Uniprot:C1BK83
Length = 364
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 86/252 (34%), Positives = 131/252 (51%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHL-AKLSGHKGAVWEVA 62
+ I H+D +HDV+ D++G+R+AT SSD S+K+ +N + A H G+VW V
Sbjct: 5 RSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSDNGEWNCTASWKTHSGSVWRVT 64
Query: 63 WAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPH 113
WAHP+FG +LASCSFD T +W+E G SN+ WIK D ++SV + +AP
Sbjct: 65 WAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVKFAPK 124
Query: 114 ELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGV----TSVSWAPSTA----PGA 165
+GL L S+DG + ++ A + S+ H + + +SW PS++ P
Sbjct: 125 HMGLMLTTCSADGVVRIY--EAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSPMI 182
Query: 166 LVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPK 225
VGS D SG V++++ K L TD V D+A+APNLG
Sbjct: 183 AVGS---DDSNTAYSG----KVQIYEYVENTRKYAKVETLMTVTDPVHDIAFAPNLGRSF 235
Query: 226 STIASASEDGKV 237
+A A++D ++
Sbjct: 236 HVLAIATKDVRI 247
Score = 168 (64.2 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 59/219 (26%), Positives = 102/219 (46%)
Query: 85 KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRI 144
K+ + WIK D ++SV + +AP +GL L S+DG + ++ A + S+
Sbjct: 96 KQRGLSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIY--EAPDVMNLSQW 153
Query: 145 DQAHPVGV----TSVSWAPSTA----PGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGI 196
H + + +SW PS++ P VGS D SG V++++
Sbjct: 154 SLQHEISCKLSCSCISWNPSSSRAHSPMIAVGS---DDSNTAYSG----KVQIYEYVENT 206
Query: 197 WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVI-IWTVAREGD-----QWE 250
K L TD V D+A+APNLG +A A++D ++ + + +E + E
Sbjct: 207 RKYAKVETLMTVTDPVHDIAFAPNLGRSFHVLAIATKDVRIFKLIPMRKESSSSGPTKLE 266
Query: 251 GKVLHDF---KTPVYRVSWSLTGNILAVADGNNNVTLWE 286
++ F + V+RVSW++T +LA + + V LW+
Sbjct: 267 VQLQAQFDGHNSQVWRVSWNITSTLLASSGDDGCVRLWK 305
>UNIPROTKB|Q5U4Y8 [details] [associations]
symbol:seh1l "Nucleoporin seh1" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0006999 "nuclear pore organization"
evidence=ISS] [GO:0007080 "mitotic metaphase plate congression"
evidence=ISS] [GO:0031080 "nuclear pore outer ring" evidence=ISS]
[GO:0051315 "attachment of spindle microtubules to kinetochore
involved in mitotic sister chromatid segregation" evidence=ISS]
[GO:0000776 "kinetochore" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051028 GO:GO:0051315
GO:GO:0000777 GO:GO:0007080 GO:GO:0031080 GO:GO:0006999 CTD:81929
KO:K14299 GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896
OMA:YEAPDIM OrthoDB:EOG4DJJWR EMBL:CR855721 EMBL:BC084902
RefSeq:NP_001011152.1 UniGene:Str.2999 ProteinModelPortal:Q5U4Y8
STRING:Q5U4Y8 Ensembl:ENSXETT00000055056 GeneID:496570
KEGG:xtr:496570 Xenbase:XB-GENE-1015661 InParanoid:Q5U4Y8
Bgee:Q5U4Y8 Uniprot:Q5U4Y8
Length = 360
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 82/250 (32%), Positives = 129/250 (51%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHL-AKLSGHKGAVWEVA 62
+ I H+D +HDV+ D++G+R+AT SSD S+K+ N H A H G+VW V
Sbjct: 5 RSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENGDWHCTASWKTHSGSVWRVT 64
Query: 63 WAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPH 113
WAHP+FG +LASCSFD T +W+E G SN+ W+K D ++SV + +AP
Sbjct: 65 WAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPK 124
Query: 114 ELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGV----TSVSWAPST--APGALV 167
+GL LA S+DG + ++ A + S+ H + + +SW PS+ A ++
Sbjct: 125 HMGLMLATCSADGVVRIY--EAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSPMI 182
Query: 168 GSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST 227
G D + V++++ K L +D V D+A+APNLG
Sbjct: 183 AVGSDDSSPNIMG-----KVQIYEYNENTRKYAKAETLMSVSDPVHDIAFAPNLGRSFHI 237
Query: 228 IASASEDGKV 237
+A A++D ++
Sbjct: 238 LAVATKDVRI 247
Score = 172 (65.6 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 57/216 (26%), Positives = 100/216 (46%)
Query: 87 GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQ 146
G S+ W+K D ++SV + +AP +GL LA S+DG + ++ A + S+
Sbjct: 99 GQSH-WVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIY--EAPDVMNLSQWSL 155
Query: 147 AHPVGV----TSVSWAPST--APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMD 200
H + + +SW PS+ A ++ G D + V++++ K
Sbjct: 156 QHEISCKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNIMG-----KVQIYEYNENTRKYA 210
Query: 201 CFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKV----LH- 255
L +D V D+A+APNLG +A A++D ++ R+ G V +H
Sbjct: 211 KAETLMSVSDPVHDIAFAPNLGRSFHILAVATKDVRIFTMKPLRKELSSSGGVTKFEIHT 270
Query: 256 -----DFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
+ + V+RVSW++TG +LA + + V LW+
Sbjct: 271 VAQFDNHNSQVWRVSWNITGTVLASSGDDGTVRLWK 306
>MGI|MGI:1919374 [details] [associations]
symbol:Seh1l "SEH1-like (S. cerevisiae" species:10090 "Mus
musculus" [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006999 "nuclear pore organization" evidence=ISO] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007080
"mitotic metaphase plate congression" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0031080 "nuclear pore outer
ring" evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1919374 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 EMBL:CH466528
GO:GO:0015031 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299
GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896 OMA:YEAPDIM
OrthoDB:EOG4DJJWR ChiTaRS:SEH1L EMBL:AK011330 EMBL:AK088835
EMBL:AK143727 EMBL:AK166573 EMBL:AK169231 EMBL:AK169388
EMBL:AK170591 EMBL:BC027244 IPI:IPI00315517 IPI:IPI00406514
RefSeq:NP_001034177.1 RefSeq:NP_082388.1 UniGene:Mm.307315
ProteinModelPortal:Q8R2U0 SMR:Q8R2U0 STRING:Q8R2U0
PhosphoSite:Q8R2U0 PaxDb:Q8R2U0 PRIDE:Q8R2U0
Ensembl:ENSMUST00000025421 GeneID:72124 KEGG:mmu:72124
UCSC:uc008fmx.1 UCSC:uc008fmy.1 InParanoid:Q3UP79 NextBio:335500
Bgee:Q8R2U0 Genevestigator:Q8R2U0 Uniprot:Q8R2U0
Length = 360
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 86/252 (34%), Positives = 130/252 (51%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHL-AKLSGHKGAVWEVA 62
+ I H+D +HDV+ D++G+R+AT SSD S+K+ + H A H G+VW V
Sbjct: 5 RSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSVWRVT 64
Query: 63 WAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPH 113
WAHP+FG +LASCSFD T +W+E G SN+ W+K D ++SV + +AP
Sbjct: 65 WAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPK 124
Query: 114 ELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGV----TSVSWAPSTA----PGA 165
+GL LA S+DG + V+ A + S+ H V + +SW PS++ P
Sbjct: 125 HMGLMLATCSADGIVRVY--EAPDVMNLSQWSLQHEVSCKLCCSCISWNPSSSRAHPPMI 182
Query: 166 LVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPK 225
VGS P + V++++ K L TD V D+A+APNLG
Sbjct: 183 AVGSDDSSP-NSMAK------VQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSF 235
Query: 226 STIASASEDGKV 237
+A A++D ++
Sbjct: 236 HILAVATKDVRI 247
Score = 171 (65.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 62/218 (28%), Positives = 103/218 (47%)
Query: 87 GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQ 146
G S+ W+K D ++SV + +AP +GL LA S+DG + V+ A + S+
Sbjct: 99 GQSH-WVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRVY--EAPDVMNLSQWSL 155
Query: 147 AHPVGV----TSVSWAPSTA----PGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWK 198
H V + +SW PS++ P VGS P + V++++ K
Sbjct: 156 QHEVSCKLCCSCISWNPSSSRAHPPMIAVGSDDSSP-NSMAK------VQIFEYNENTRK 208
Query: 199 MDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE------GD-QWEG 251
L TD V D+A+APNLG +A A++D ++ R+ G ++E
Sbjct: 209 YAKAETLMTVTDPVHDIAFAPNLGRSFHILAVATKDVRIFTLKPLRKELTSSGGPTKFEI 268
Query: 252 KVLHDF---KTPVYRVSWSLTGNILAVADGNNNVTLWE 286
++ F + V+RVSW++TG +LA + + V LW+
Sbjct: 269 HIVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWK 306
>UNIPROTKB|A7YY75 [details] [associations]
symbol:SEH1L "Nucleoporin SEH1" species:9913 "Bos taurus"
[GO:0000776 "kinetochore" evidence=ISS] [GO:0007080 "mitotic
metaphase plate congression" evidence=ISS] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=ISS] [GO:0031080 "nuclear pore
outer ring" evidence=ISS] [GO:0006999 "nuclear pore organization"
evidence=ISS] [GO:0000777 "condensed chromosome kinetochore"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051028
"mRNA transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299 EMBL:BC151606
IPI:IPI00839665 RefSeq:NP_001096559.1 UniGene:Bt.103393
ProteinModelPortal:A7YY75 STRING:A7YY75 Ensembl:ENSBTAT00000049050
GeneID:506509 KEGG:bta:506509 eggNOG:NOG257251
GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896 OMA:YEAPDIM
NextBio:20867635 ArrayExpress:A7YY75 Uniprot:A7YY75
Length = 360
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 85/252 (33%), Positives = 129/252 (51%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHL-AKLSGHKGAVWEVA 62
+ I H+D +HDV+ D++G+R+AT SSD S+K+ + H A H G+VW V
Sbjct: 5 RSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGEWHCTASWKTHSGSVWRVT 64
Query: 63 WAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPH 113
WAHP+FG +LASCSFD T +W+E G SN+ W+K D ++SV + +AP
Sbjct: 65 WAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPK 124
Query: 114 ELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGV----TSVSWAPST----APGA 165
+GL LA S+DG + ++ A + S+ H + + +SW PS+ AP
Sbjct: 125 HMGLMLATCSADGIVRIY--EAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHAPMI 182
Query: 166 LVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPK 225
VGS P V++++ K L TD V D+A+APNLG
Sbjct: 183 AVGSDDSSP-------NAMAKVQIFEYNENTRKYAKAETLLTVTDPVHDIAFAPNLGRSF 235
Query: 226 STIASASEDGKV 237
+A A++D ++
Sbjct: 236 HILAIATKDVRI 247
Score = 171 (65.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 62/218 (28%), Positives = 104/218 (47%)
Query: 87 GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQ 146
G S+ W+K D ++SV + +AP +GL LA S+DG + ++ A + S+
Sbjct: 99 GQSH-WVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIY--EAPDVMNLSQWSL 155
Query: 147 AHPVGV----TSVSWAPST----APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWK 198
H + + +SW PS+ AP VGS P V++++ K
Sbjct: 156 QHEISCKLSCSCISWNPSSSRAHAPMIAVGSDDSSP-------NAMAKVQIFEYNENTRK 208
Query: 199 MDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVI-IWTVARE-----GD-QWEG 251
L TD V D+A+APNLG +A A++D ++ + V +E G ++E
Sbjct: 209 YAKAETLLTVTDPVHDIAFAPNLGRSFHILAIATKDVRIFTLKPVRKELTSSGGPTKFEI 268
Query: 252 KVLHDF---KTPVYRVSWSLTGNILAVADGNNNVTLWE 286
++ F + V+RVSW++TG +LA + + V LW+
Sbjct: 269 HIVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWK 306
>UNIPROTKB|Q96EE3 [details] [associations]
symbol:SEH1L "Nucleoporin SEH1" species:9606 "Homo sapiens"
[GO:0015031 "protein transport" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0006999 "nuclear pore organization" evidence=IMP] [GO:0031080
"nuclear pore outer ring" evidence=NAS;IDA] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=IMP] [GO:0007080 "mitotic metaphase
plate congression" evidence=IMP] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005635 "nuclear
envelope" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0008645 "hexose transport" evidence=TAS] [GO:0010827
"regulation of glucose transport" evidence=TAS] [GO:0015758
"glucose transport" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Reactome:REACT_116125
Reactome:REACT_6900 Reactome:REACT_115566 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0044281 GO:GO:0015031
GO:GO:0005975 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0019221 GO:GO:0015758 GO:GO:0010827 GO:GO:0055085
GO:GO:0051028 GO:GO:0051315 GO:GO:0000236 GO:GO:0000777
GO:GO:0007080 GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299
HOGENOM:HOG000216896 OMA:YEAPDIM EMBL:AF255625 EMBL:AF431970
EMBL:AF514996 EMBL:AF136976 EMBL:AK056940 EMBL:AK291226
EMBL:BC012430 IPI:IPI00185533 IPI:IPI00220609 RefSeq:NP_001013455.1
RefSeq:NP_112493.2 UniGene:Hs.301048 ProteinModelPortal:Q96EE3
SMR:Q96EE3 IntAct:Q96EE3 STRING:Q96EE3 DMDM:257051064 PaxDb:Q96EE3
PRIDE:Q96EE3 DNASU:81929 Ensembl:ENST00000262124
Ensembl:ENST00000399892 GeneID:81929 KEGG:hsa:81929 UCSC:uc002krq.3
UCSC:uc002krr.3 GeneCards:GC18P012947 HGNC:HGNC:30379 HPA:HPA039964
MIM:609263 neXtProt:NX_Q96EE3 PharmGKB:PA134912135
InParanoid:Q96EE3 OrthoDB:EOG4DJJWR PhylomeDB:Q96EE3 ChiTaRS:SEH1L
GenomeRNAi:81929 NextBio:72265 Bgee:Q96EE3 CleanEx:HS_SEH1L
Genevestigator:Q96EE3 GermOnline:ENSG00000085415 Uniprot:Q96EE3
Length = 360
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 83/250 (33%), Positives = 129/250 (51%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHL-AKLSGHKGAVWEVA 62
+ I H+D +HDV+ D++G+R+AT SSD S+K+ + H A H G+VW V
Sbjct: 5 RSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSVWRVT 64
Query: 63 WAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPH 113
WAHP+FG +LASCSFD T +W+E G SN+ W+K D ++SV + +AP
Sbjct: 65 WAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPK 124
Query: 114 ELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGV----TSVSWAPST--APGALV 167
+GL LA S+DG + ++ A + S+ H + + +SW PS+ A ++
Sbjct: 125 HMGLMLATCSADGIVRIY--EAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSPMI 182
Query: 168 GSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST 227
G D S V++++ K L TD V D+A+APNLG
Sbjct: 183 AVGSDDS-----SPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHI 237
Query: 228 IASASEDGKV 237
+A A++D ++
Sbjct: 238 LAIATKDVRI 247
Score = 171 (65.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 60/216 (27%), Positives = 104/216 (48%)
Query: 87 GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQ 146
G S+ W+K D ++SV + +AP +GL LA S+DG + ++ A + S+
Sbjct: 99 GQSH-WVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIY--EAPDVMNLSQWSL 155
Query: 147 AHPVGV----TSVSWAPST--APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMD 200
H + + +SW PS+ A ++ G D S V++++ K
Sbjct: 156 QHEISCKLSCSCISWNPSSSRAHSPMIAVGSDDS-----SPNAMAKVQIFEYNENTRKYA 210
Query: 201 CFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVI-IWTVARE-----GD-QWEGKV 253
L TD V D+A+APNLG +A A++D ++ + V +E G ++E +
Sbjct: 211 KAETLMTVTDPVHDIAFAPNLGRSFHILAIATKDVRIFTLKPVRKELTSSGGPTKFEIHI 270
Query: 254 LHDF---KTPVYRVSWSLTGNILAVADGNNNVTLWE 286
+ F + V+RVSW++TG +LA + + V LW+
Sbjct: 271 VAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWK 306
>UNIPROTKB|Q5RAN6 [details] [associations]
symbol:SEH1L "Nucleoporin SEH1" species:9601 "Pongo abelii"
[GO:0006999 "nuclear pore organization" evidence=ISS] [GO:0007080
"mitotic metaphase plate congression" evidence=ISS] [GO:0031080
"nuclear pore outer ring" evidence=ISS] [GO:0051315 "attachment of
spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=ISS] [GO:0000776 "kinetochore"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299
HOGENOM:HOG000216896 EMBL:CR858979 RefSeq:NP_001125688.1
UniGene:Pab.10091 ProteinModelPortal:Q5RAN6 PRIDE:Q5RAN6
GeneID:100172610 KEGG:pon:100172610 InParanoid:Q5RAN6
Uniprot:Q5RAN6
Length = 360
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 83/250 (33%), Positives = 129/250 (51%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHL-AKLSGHKGAVWEVA 62
+ I H+D +HDV+ D++G+R+AT SSD S+K+ + H A H G+VW V
Sbjct: 5 RSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSVWRVT 64
Query: 63 WAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPH 113
WAHP+FG +LASCSFD T +W+E G SN+ W+K D ++SV + +AP
Sbjct: 65 WAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPK 124
Query: 114 ELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGV----TSVSWAPST--APGALV 167
+GL LA S+DG + ++ A + S+ H + + +SW PS+ A ++
Sbjct: 125 HMGLMLATCSADGIVRIY--EAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSPMI 182
Query: 168 GSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST 227
G D S V++++ K L TD V D+A+APNLG
Sbjct: 183 AVGSDDS-----SPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHI 237
Query: 228 IASASEDGKV 237
+A A++D ++
Sbjct: 238 LAIATKDVRI 247
Score = 170 (64.9 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 60/216 (27%), Positives = 104/216 (48%)
Query: 87 GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQ 146
G S+ W+K D ++SV + +AP +GL LA S+DG + ++ A + S+
Sbjct: 99 GQSH-WVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIY--EAPDVMNLSQWSL 155
Query: 147 AHPVGV----TSVSWAPST--APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMD 200
H + + +SW PS+ A ++ G D S V++++ K
Sbjct: 156 QHEISCKLSCSCISWNPSSSRAHSPMIAVGSDDS-----SPNAMAKVQIFEYNENTRKYA 210
Query: 201 CFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVI-IWTVARE-----GD-QWEGKV 253
L TD V D+A+APNLG +A A++D ++ + V +E G ++E +
Sbjct: 211 KAETLMTVTDPVHDIAFAPNLGRSFHILAIATKDVRIFTLKPVRKELTSSGGPTKFEIHI 270
Query: 254 LHDF---KTPVYRVSWSLTGNILAVADGNNNVTLWE 286
+ F + V+RVSW++TG +LA + + V LW+
Sbjct: 271 VAHFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWK 306
>SGD|S000003068 [details] [associations]
symbol:SEH1 "Component of two distinct complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0005773 "vacuole"
evidence=IEA] [GO:0035859 "Seh1-associated complex" evidence=IDA]
[GO:0031080 "nuclear pore outer ring" evidence=IDA] [GO:0017056
"structural constituent of nuclear pore" evidence=IC] [GO:0005643
"nuclear pore" evidence=IEA;IDA] [GO:0006913 "nucleocytoplasmic
transport" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0000329 "fungal-type vacuole membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=ISM]
[GO:0005774 "vacuolar membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000003068 GO:GO:0005886
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 EMBL:BK006941
GO:GO:0015031 eggNOG:COG2319 GO:GO:0006913 GO:GO:0000329
GO:GO:0051028 TCDB:9.A.14.1.1 GO:GO:0031080 GO:GO:0035859
GO:GO:0017056 PDB:3EWE PDB:3F3F PDB:3F3G PDB:3F3P PDBsum:3EWE
PDBsum:3F3F PDBsum:3F3G PDBsum:3F3P KO:K14299
GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896 OMA:YEAPDIM
OrthoDB:EOG418FX3 EMBL:X90994 EMBL:Z72622 EMBL:AY558497 PIR:S62137
RefSeq:NP_011415.1 ProteinModelPortal:P53011 SMR:P53011
DIP:DIP-4193N IntAct:P53011 MINT:MINT-547303 STRING:P53011
PaxDb:P53011 PeptideAtlas:P53011 EnsemblFungi:YGL100W GeneID:852778
KEGG:sce:YGL100W CYGD:YGL100w EvolutionaryTrace:P53011
NextBio:972254 Genevestigator:P53011 GermOnline:YGL100W
Uniprot:P53011
Length = 349
Score = 285 (105.4 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 78/256 (30%), Positives = 125/256 (48%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQ-HLA-KLSGHKGAVWEV 61
Q ++GH+D VHDV D+YG+ +AT SSD IK+ + +TS L+ H ++ +
Sbjct: 2 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAI 61
Query: 62 AWAHPKFGSILASCSFDGTVIIWKEGNSNE------WIKDHVFEDHKSSVNSIDWAPHEL 115
WA P++G I+AS S+D TV +W+E E W K D K S+ S+ +AP L
Sbjct: 62 DWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHL 121
Query: 116 GLCLACGSSDGNISVFTARADG---GWD-TS--RIDQAHPVGVTSVSWAPSTAPGALVGS 169
GL LAC +DG + ++ A W TS ++ P + S P S
Sbjct: 122 GLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCP-----S 176
Query: 170 GFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIA 229
F P +KL + + + +G K+ L H +R ++WAP++G IA
Sbjct: 177 RF-SP-EKLAVSALEQAIIYQRGKDG--KLHVAAKLPGHKSLIRSISWAPSIGRWYQLIA 232
Query: 230 SASEDGKVIIWTVARE 245
+ +DG++ I+ + +
Sbjct: 233 TGCKDGRIRIFKITEK 248
Score = 71 (30.1 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 256 DFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
D V+ VSW+LTG IL+ A + V LW+
Sbjct: 302 DHNGEVWSVSWNLTGTILSSAGDDGKVRLWK 332
>UNIPROTKB|B3GEK9 [details] [associations]
symbol:npp-20 "Nuclear pore complex protein 20"
species:135651 "Caenorhabditis brenneri" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0005643 "nuclear pore" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 GO:GO:0005643
GO:GO:0000910 EMBL:EU692928 ProteinModelPortal:B3GEK9 STRING:B3GEK9
Uniprot:B3GEK9
Length = 209
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 70/196 (35%), Positives = 108/196 (55%)
Query: 94 KDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTA-RADGGWDTSRIDQAHPVGV 152
K + +E H++S + +APH+ GL LA S+DG+I + G W +S+I + H GV
Sbjct: 2 KSYEWEAHEASTTCVAFAPHQYGLMLASSSADGDIGILRYDTVTGQWQSSKIQKCHEQGV 61
Query: 153 TSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWV 212
SVSWAP TA L ++L S G DN VK+W L + + C L HTD+V
Sbjct: 62 NSVSWAPGTAD--------LSAKKRLVSAGNDNKVKIWLLNDTTNEWTCEKVLSGHTDYV 113
Query: 213 RDVAWAPNLGLPKSTIASASEDGKVIIWTVAR-EGDQWEGKVLHDFKTPVYRVSWSLTGN 271
R+ +W P + +I S DG ++++ A E D+W+ K+L P+Y S+S G+
Sbjct: 114 REASWCPVTNKGQHSIVSCGIDGNLVLFRTANIETDEWKSKLLEKAPCPLYHASFSPCGS 173
Query: 272 ILAVADGNNNVTLWEE 287
L+V+ +N +T+W E
Sbjct: 174 FLSVSGDDNMITIWRE 189
Score = 123 (48.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 33/125 (26%), Positives = 56/125 (44%)
Query: 54 HKGAVWEVAWAHPKFGSILASCSFDGTV-IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP 112
H+ + VA+A ++G +LAS S DG + I+ + + +W + + H+ VNS+ WAP
Sbjct: 9 HEASTTCVAFAPHQYGLMLASSSADGDIGILRYDTVTGQWQSSKIQKCHEQGVNSVSWAP 68
Query: 113 HELGLC----LACGSSDGNISVFTAR-ADGGWDTSRIDQAHPVGVTSVSWAPSTAPG--A 165
L L +D + ++ W ++ H V SW P T G +
Sbjct: 69 GTADLSAKKRLVSAGNDNKVKIWLLNDTTNEWTCEKVLSGHTDYVREASWCPVTNKGQHS 128
Query: 166 LVGSG 170
+V G
Sbjct: 129 IVSCG 133
Score = 116 (45.9 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 39/147 (26%), Positives = 67/147 (45%)
Query: 5 KIETGHEDTVHDVAM-----DYYGK-RLATASSDYSIKIIGVGNNTSQHLAK--LSGHKG 56
KI+ HE V+ V+ D K RL +A +D +KI + + T++ + LSGH
Sbjct: 52 KIQKCHEQGVNSVSWAPGTADLSAKKRLVSAGNDNKVKIWLLNDTTNEWTCEKVLSGHTD 111
Query: 57 AVWEVAWAHP--KFGSILASCSFDGTVIIWKEGN--SNEWIKDHVFEDHKSSVNSIDWAP 112
V E +W K + SC DG +++++ N ++EW K + E + ++P
Sbjct: 112 YVREASWCPVTNKGQHSIVSCGIDGNLVLFRTANIETDEW-KSKLLEKAPCPLYHASFSP 170
Query: 113 HELGLCLACGSSDGNISVFTARADGGW 139
G L+ D I+++ G W
Sbjct: 171 --CGSFLSVSGDDNMITIWRENLQGQW 195
>FB|FBgn0033247 [details] [associations]
symbol:Nup44A "Nucleoporin at 44A" species:7227 "Drosophila
melanogaster" [GO:0005643 "nuclear pore" evidence=ISS] [GO:0017056
"structural constituent of nuclear pore" evidence=ISS] [GO:0007184
"SMAD protein import into nucleus" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0051445 "regulation of meiotic cell
cycle" evidence=IMP] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IMP] [GO:0043234 "protein complex" evidence=IPI]
[GO:0005635 "nuclear envelope" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0007346
GO:GO:0005635 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048477
GO:GO:0051445 KO:K14299 GeneTree:ENSGT00550000074999 OMA:YEAPDIM
EMBL:AY060480 RefSeq:NP_610343.1 RefSeq:NP_724637.1
RefSeq:NP_724638.1 UniGene:Dm.3965 SMR:Q7K2X8 IntAct:Q7K2X8
STRING:Q7K2X8 EnsemblMetazoa:FBtr0088860 EnsemblMetazoa:FBtr0088861
EnsemblMetazoa:FBtr0088862 GeneID:35762 KEGG:dme:Dmel_CG8722
UCSC:CG8722-RA CTD:35762 FlyBase:FBgn0033247 InParanoid:Q7K2X8
OrthoDB:EOG42V6XT GenomeRNAi:35762 NextBio:795094 Uniprot:Q7K2X8
Length = 354
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 93/308 (30%), Positives = 152/308 (49%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVA 62
+ I H+D +HDV DYYG+R+AT SSD ++KI G + H G++W V+
Sbjct: 5 EPIIADHKDVIHDVVFDYYGRRMATCSSDQTVKIWDEDGQGKWNVTSSWKAHSGSIWRVS 64
Query: 63 WAHPKFGSILASCSFDGTVIIWKE------GNSN----EWIKDHVFEDHKSSVNSIDWAP 112
WAHP+FG ++A+CSFD T +W+E ++N W++ D ++SV +++AP
Sbjct: 65 WAHPEFGQVVATCSFDRTASVWEEVIGEKVSSTNTPTRRWVRRTTLVDSRTSVTDVEFAP 124
Query: 113 HELGLCLACGSSDGNISVFTARAD----GGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG 168
LGL LA S+DG I ++ A D W + ++ + ++ +SW ST
Sbjct: 125 KYLGLLLATASADGIIRIYEA-PDIMNLSQWPVQH-EISNKLPLSCLSWNTST------- 175
Query: 169 SGFLDPVQKLCSGGCDN----TVKVWKLYNGIWKMDCFPALQMH--TDWVRDVAWAPNLG 222
++ V +L + G D T KV+ C ++ TD V DVA+APN G
Sbjct: 176 --YM--VTQLLAAGSDEAATPTGKVFLFAYSENSRKCVKIDTVNDITDPVTDVAFAPNAG 231
Query: 223 LPKSTIASASEDGKVIIW---TVAREGDQWEGKVLH--DFKTPVYRVSWSLTGNILAVAD 277
+A AS+D ++ T A + + + + + + PV+RV W++ +L
Sbjct: 232 RTFHMLAVASKDLYIVNLRGVTDATDISKLDIQTIKFSEHNCPVWRVCWNMLATMLISTG 291
Query: 278 GNNNVTLW 285
+ V LW
Sbjct: 292 DDGCVRLW 299
>POMBASE|SPAC15F9.02 [details] [associations]
symbol:seh1 "nucleoporin Seh1" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005643
"nuclear pore" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006407 "rRNA export from nucleus" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0031080 "nuclear pore outer
ring" evidence=IDA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC15F9.02 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031 eggNOG:COG2319
GO:GO:0051028 GO:GO:0031080 GO:GO:0006407 KO:K14299
HOGENOM:HOG000216896 OMA:YEAPDIM PIR:T37727 RefSeq:NP_593751.1
ProteinModelPortal:Q10099 IntAct:Q10099 STRING:Q10099
EnsemblFungi:SPAC15F9.02.1 GeneID:2541682 KEGG:spo:SPAC15F9.02
OrthoDB:EOG418FX3 NextBio:20802775 Uniprot:Q10099
Length = 339
Score = 283 (104.7 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 73/244 (29%), Positives = 119/244 (48%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKG--AVWEVAW 63
I+T H+D V+DV D+YG+R+ + S+D +K+ ++T G ++ VAW
Sbjct: 9 IQTNHQDLVNDVTYDFYGRRMVSCSADQRVKVYDFNDDTETWAITSEWRAGDASLMRVAW 68
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSN----EWIKDHVFEDHKSSVNSIDWAPHELGLCL 119
AHP FG +LA CS D V I++E N W++ D +S+V I + P + G L
Sbjct: 69 AHPSFGQVLAVCSLDRGVRIYEEQKKNFESKTWVEVAKLMDARSAVLDISFCPFQHGCKL 128
Query: 120 ACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLC 179
A S+D + ++ A G + + + + + + P V ++
Sbjct: 129 AAVSADATLRIYEAMEPGNLTYWTL--MNEIALMPSPPSRNEQPAFCVNWCPSRWREQYI 186
Query: 180 SGGCDNTVKVWKLYN-GIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVI 238
+ GC N ++K + G WK L HTD +RD+ WAP++G IA+A +DG V
Sbjct: 187 AVGCMNDAYIYKQNSHGKWKK--VAELPGHTDLIRDICWAPSMGSSYYLIATACKDGNVR 244
Query: 239 IWTV 242
I+ V
Sbjct: 245 IFKV 248
Score = 49 (22.3 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 258 KTPVYRVSWSLTGNILAVADGNNNVTLWE 286
K V+R +++TG IL+ + + V LW+
Sbjct: 289 KCQVWRCRFNVTGTILSSSGDDGCVRLWK 317
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 178 (67.7 bits), Expect = 7.3e-22, Sum P(2) = 7.3e-22
Identities = 48/152 (31%), Positives = 73/152 (48%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAWAHPK 67
GHED V +VA + G LA+ D SI++ G+ G + L GH+ V V+W++
Sbjct: 11 GHEDRVWNVAWNPSGTILASCGGDKSIRLWGLEGGSWVCKSVLLDGHQRTVRGVSWSN-- 68
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G LAS SFDGT IW+ + + E H++ V + W+P G LA S D
Sbjct: 69 CGRYLASSSFDGTTCIWRR-QDDTFESCATLEGHENEVKACGWSPS--GRFLATCSRDKT 125
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 159
+ ++ D ++ + + H V V W P
Sbjct: 126 VWIWEVGEDEEFECASVQTCHSQDVKKVLWHP 157
Score = 178 (67.7 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 67/216 (31%), Positives = 88/216 (40%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH+ TV V+ G+ LA++S D + I ++T + A L GH+ V W+ P
Sbjct: 56 GHQRTVRGVSWSNCGRYLASSSFDGTTCIWRRQDDTFESCATLEGHENEVKACGWS-PS- 113
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G LA+CS D TV IW+ G E+ V H V + W P L A S D I
Sbjct: 114 GRFLATCSRDKTVWIWEVGEDEEFECASVQTCHSQDVKKVLWHPDRDEL--ASASYDNTI 171
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVK 188
F D W H S W S PG P +L S D +V
Sbjct: 172 RFFCEEVDD-WQCYCTLDKH----ASTVWGLSFGPG---------PEPQLASCAADGSVY 217
Query: 189 VW--KLYNGIWKMDCFPALQMHTDWVRDVAWAPNLG 222
VW K W++ C L+ H V DV+W G
Sbjct: 218 VWGTKGDRRSWEL-C-GTLERHPRPVYDVSWCRTRG 251
Score = 168 (64.2 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 59/192 (30%), Positives = 81/192 (42%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
++T H V V LA+AS D +I+ + Q L H VW +++
Sbjct: 142 VQTCHSQDVKKVLWHPDRDELASASYDNTIRFFCEEVDDWQCYCTLDKHASTVWGLSFG- 200
Query: 66 PKFGSILASCSFDGTVIIW-KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSS 124
P LASC+ DG+V +W +G+ W E H V + W L ACG
Sbjct: 201 PGPEPQLASCAADGSVYVWGTKGDRRSWELCGTLERHPRPVYDVSWCRTRGFLATACG-- 258
Query: 125 DGNISVFTARADGG---WDTS-RIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
D + VF DGG W + QAH V SVSW+PS G L L S
Sbjct: 259 DNAVRVFVK--DGGDCSWRLGCTLTQAHSQDVNSVSWSPS---GGL-----------LAS 302
Query: 181 GGCDNTVKVWKL 192
G D V++W++
Sbjct: 303 AGDDGYVRLWQI 314
Score = 159 (61.0 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 39/115 (33%), Positives = 61/115 (53%)
Query: 48 LAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK-EGNSNEWI-KDHVFEDHKSSV 105
L+ L GH+ VW VAW +P G+ILASC D ++ +W EG S W+ K + + H+ +V
Sbjct: 6 LSDLEGHEDRVWNVAW-NPS-GTILASCGGDKSIRLWGLEGGS--WVCKSVLLDGHQRTV 61
Query: 106 NSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
+ W+ G LA S DG ++ R D +++ + H V + W+PS
Sbjct: 62 RGVSWS--NCGRYLASSSFDGTTCIWR-RQDDTFESCATLEGHENEVKACGWSPS 113
Score = 129 (50.5 bits), Expect = 7.3e-22, Sum P(2) = 7.3e-22
Identities = 35/111 (31%), Positives = 52/111 (46%)
Query: 177 KLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGK 236
+L S DNT++ + W+ C+ L H V +++ P P+ +AS + DG
Sbjct: 161 ELASASYDNTIRFFCEEVDDWQ--CYCTLDKHASTVWGLSFGPG---PEPQLASCAADGS 215
Query: 237 VIIWTVAREGDQWE--GKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW 285
V +W + WE G L PVY VSW T LA A G+N V ++
Sbjct: 216 VYVWGTKGDRRSWELCG-TLERHPRPVYDVSWCRTRGFLATACGDNAVRVF 265
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/110 (32%), Positives = 50/110 (45%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
L S G D ++++W L G W L H VR V+W+ N G +AS+S DG
Sbjct: 28 LASCGGDKSIRLWGLEGGSWVCKSV-LLDGHQRTVRGVSWS-NCG---RYLASSSFDGTT 82
Query: 238 IIWTVAREGDQWEG-KVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
IW R+ D +E L + V WS +G LA + V +WE
Sbjct: 83 CIWR--RQDDTFESCATLEGHENEVKACGWSPSGRFLATCSRDKTVWIWE 130
Score = 91 (37.1 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 184 DNTVKVWKLYNG--IWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT 241
DN V+V+ G W++ C Q H+ V V+W+P+ GL +ASA +DG V +W
Sbjct: 259 DNAVRVFVKDGGDCSWRLGC-TLTQAHSQDVNSVSWSPSGGL----LASAGDDGYVRLWQ 313
Query: 242 V 242
+
Sbjct: 314 I 314
>UNIPROTKB|I3LR40 [details] [associations]
symbol:SEH1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051315 "attachment of spindle microtubules to
kinetochore involved in mitotic sister chromatid segregation"
evidence=IEA] [GO:0007080 "mitotic metaphase plate congression"
evidence=IEA] [GO:0006999 "nuclear pore organization" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0051315 GO:GO:0007080 GO:GO:0006999
GeneTree:ENSGT00550000074999 OMA:YEAPDIM EMBL:FP565312
Ensembl:ENSSSCT00000023051 Uniprot:I3LR40
Length = 324
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 67/201 (33%), Positives = 100/201 (49%)
Query: 54 HKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSS 104
H G+VW V WAHP+FG +LASCSFD T +W+E G SN+ W+K D ++S
Sbjct: 19 HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTS 78
Query: 105 VNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGV----TSVSWAPS 160
V + +AP +GL LA S+DG + ++ A + S+ H V + +SW PS
Sbjct: 79 VTDVKFAPKHMGLMLATCSADGIVRIY--EAPDVMNLSQWSLQHEVSCKLSCSCISWNPS 136
Query: 161 TA----PGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVA 216
++ P VGS P V++++ K L TD V D+A
Sbjct: 137 SSRAHPPMIAVGSDDGSP-------NAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIA 189
Query: 217 WAPNLGLPKSTIASASEDGKV 237
+APNLG +A A++D ++
Sbjct: 190 FAPNLGRSFHILAIATKDVRI 210
Score = 171 (65.3 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 63/219 (28%), Positives = 106/219 (48%)
Query: 87 GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQ 146
G S+ W+K D ++SV + +AP +GL LA S+DG + ++ A + S+
Sbjct: 62 GQSH-WVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIY--EAPDVMNLSQWSL 118
Query: 147 AHPVGV----TSVSWAPSTA----PGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWK 198
H V + +SW PS++ P VGS P V++++ K
Sbjct: 119 QHEVSCKLSCSCISWNPSSSRAHPPMIAVGSDDGSP-------NAMAKVQIFEYNENTRK 171
Query: 199 MDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVI-IWTVARE------GD-QWE 250
L TD V D+A+APNLG +A A++D ++ + V+R+ G ++E
Sbjct: 172 YAKAETLMTVTDPVHDIAFAPNLGRSFHILAIATKDVRIFTLKPVSRKELTSSGGPTKFE 231
Query: 251 GKVLHDF---KTPVYRVSWSLTGNILAVADGNNNVTLWE 286
+V+ F + V+RVSW++TG +LA + + V LW+
Sbjct: 232 IQVVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWK 270
>CGD|CAL0005451 [details] [associations]
symbol:orf19.2186 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0000329 "fungal-type vacuole membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0031080 "nuclear pore
outer ring" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005451 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AACQ01000076 EMBL:AACQ01000075 KO:K14299
RefSeq:XP_715969.1 RefSeq:XP_716027.1 ProteinModelPortal:Q5A2S9
STRING:Q5A2S9 GeneID:3642290 GeneID:3642391 KEGG:cal:CaO19.2186
KEGG:cal:CaO19.9732 Uniprot:Q5A2S9
Length = 347
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 50/135 (37%), Positives = 78/135 (57%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS--GHKGAVWEVAWAH 65
TGHE+ +HD+ D+YGK +AT SSD IK+ + + TS + S H ++ +++WAH
Sbjct: 16 TGHEELIHDIKYDFYGKHIATVSSDQHIKVFDLDSATSSWILNDSWKAHDSSIAKISWAH 75
Query: 66 PKFGS--ILASCSFDGTVIIWKE------GNSNEWIK-DHVFEDHKSSVNSIDWAPHELG 116
P+F S I+ASCS+D TV IW+E G+ W+K + + + + +AP+ LG
Sbjct: 76 PEFSSSKIIASCSYDRTVKIWQEQPDEMPGSGRRWLKLATLATESYGPIYDVCFAPNHLG 135
Query: 117 LCLACGSSDGNISVF 131
L C SDG ++
Sbjct: 136 FKLGCVGSDGIFRIY 150
Score = 159 (61.0 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 63/224 (28%), Positives = 103/224 (45%)
Query: 87 GNSNEWIK-DHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADG---GW--- 139
G+ W+K + + + + +AP+ LG L C SDG ++ + W
Sbjct: 105 GSGRRWLKLATLATESYGPIYDVCFAPNHLGFKLGCVGSDGIFRIYESLEPNDLTAWVLT 164
Query: 140 -DTSRIDQAHPV-GVTS---VSWAPS----TAPGALVG--SGFL-DPVQKLCSGGCDNTV 187
+ + ++ + P + S V W PS T +V GF+ VQK SG +
Sbjct: 165 TEIAILNSSLPAKSLQSSFGVEWCPSKFTKTEKFIVVALDQGFVYGSVQKESSGEESASD 224
Query: 188 KVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGD 247
K K+ C L H +R V+WAP++G IA+ +DG V I+ A E +
Sbjct: 225 KYVKI--------C--DLPEHNGLIRSVSWAPSMGRKYHLIATGCKDGFVRIFK-ATEQE 273
Query: 248 QWEGKV-----LHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
+ K+ L+D K+ V+RVSW++TG IL+ A + + LW+
Sbjct: 274 NGDLKIETLAKLNDHKSEVWRVSWNMTGTILSSAGDDGKLRLWK 317
>UNIPROTKB|Q5A2S9 [details] [associations]
symbol:SEH1 "Putative uncharacterized protein SEH1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005451 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AACQ01000076 EMBL:AACQ01000075 KO:K14299
RefSeq:XP_715969.1 RefSeq:XP_716027.1 ProteinModelPortal:Q5A2S9
STRING:Q5A2S9 GeneID:3642290 GeneID:3642391 KEGG:cal:CaO19.2186
KEGG:cal:CaO19.9732 Uniprot:Q5A2S9
Length = 347
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 50/135 (37%), Positives = 78/135 (57%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS--GHKGAVWEVAWAH 65
TGHE+ +HD+ D+YGK +AT SSD IK+ + + TS + S H ++ +++WAH
Sbjct: 16 TGHEELIHDIKYDFYGKHIATVSSDQHIKVFDLDSATSSWILNDSWKAHDSSIAKISWAH 75
Query: 66 PKFGS--ILASCSFDGTVIIWKE------GNSNEWIK-DHVFEDHKSSVNSIDWAPHELG 116
P+F S I+ASCS+D TV IW+E G+ W+K + + + + +AP+ LG
Sbjct: 76 PEFSSSKIIASCSYDRTVKIWQEQPDEMPGSGRRWLKLATLATESYGPIYDVCFAPNHLG 135
Query: 117 LCLACGSSDGNISVF 131
L C SDG ++
Sbjct: 136 FKLGCVGSDGIFRIY 150
Score = 159 (61.0 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 63/224 (28%), Positives = 103/224 (45%)
Query: 87 GNSNEWIK-DHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADG---GW--- 139
G+ W+K + + + + +AP+ LG L C SDG ++ + W
Sbjct: 105 GSGRRWLKLATLATESYGPIYDVCFAPNHLGFKLGCVGSDGIFRIYESLEPNDLTAWVLT 164
Query: 140 -DTSRIDQAHPV-GVTS---VSWAPS----TAPGALVG--SGFL-DPVQKLCSGGCDNTV 187
+ + ++ + P + S V W PS T +V GF+ VQK SG +
Sbjct: 165 TEIAILNSSLPAKSLQSSFGVEWCPSKFTKTEKFIVVALDQGFVYGSVQKESSGEESASD 224
Query: 188 KVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGD 247
K K+ C L H +R V+WAP++G IA+ +DG V I+ A E +
Sbjct: 225 KYVKI--------C--DLPEHNGLIRSVSWAPSMGRKYHLIATGCKDGFVRIFK-ATEQE 273
Query: 248 QWEGKV-----LHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
+ K+ L+D K+ V+RVSW++TG IL+ A + + LW+
Sbjct: 274 NGDLKIETLAKLNDHKSEVWRVSWNMTGTILSSAGDDGKLRLWK 317
>WB|WBGene00003804 [details] [associations]
symbol:npp-18 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031
eggNOG:COG2319 GO:GO:0005643 GO:GO:0045132 GO:GO:0051028 KO:K14299
GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896 OMA:YEAPDIM
EMBL:AL021481 PIR:T26842 RefSeq:NP_499740.1
ProteinModelPortal:O45933 SMR:O45933 STRING:O45933 PaxDb:O45933
EnsemblMetazoa:Y43F4B.4.1 EnsemblMetazoa:Y43F4B.4.2 GeneID:176748
KEGG:cel:CELE_Y43F4B.4 UCSC:Y43F4B.4 CTD:176748 WormBase:Y43F4B.4
InParanoid:O45933 NextBio:893842 Uniprot:O45933
Length = 363
Score = 241 (89.9 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 72/250 (28%), Positives = 119/250 (47%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIG-VGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
H D +H V+ D +G+R+AT +SD ++ I + + A H GAVW V WAHP+F
Sbjct: 16 HRDLIHCVSFDPHGRRMATCASDMTMAIWDRKPDGNWRRSAHWKCHGGAVWRVIWAHPEF 75
Query: 69 GSILASCSFDGTVIIWKEG----------NSNEWIKDHVFEDHKSSVNSIDWAPHELGLC 118
G I+A+CS+D T++IW+E ++WI+ + D++S V I ++P LGL
Sbjct: 76 GQIVATCSYDRTIVIWEEQIVRSEKDLKQKESQWIRRTIISDNRSDVTDICFSPRHLGLM 135
Query: 119 LACGSSDGNISVFTAR--ADGG-WDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPV 175
+A + G + ++ A D W+ QA V+W+ S L+ G D
Sbjct: 136 MASCNVLGTVRIYEAPDIVDASRWNLIHELQAFHTRCGCVTWSLSRMHRPLIAVGS-D-- 192
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDW-VRDVAWAPNLGLPKSTIASASED 234
+K V +++ +G+ K +L + D+ ++P + +A AS D
Sbjct: 193 EKKAEN--KKRVVIYENIDGLRKWQRINSLVFDLPCPITDLKFSPISMVDSHQLAVASGD 250
Query: 235 GKVIIWTVAR 244
V VAR
Sbjct: 251 VHVYNIKVAR 260
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 87/301 (28%), Positives = 128/301 (42%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ GH T+ DVA G+ LA+AS D ++ I + + A L GH+ V V+W+
Sbjct: 55 LSDGHSRTIRDVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWS- 113
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
K GS+LA+CS D +V +W+ +E+ V H V ++W PHE LA S D
Sbjct: 114 -KSGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHED--ILASASYD 170
Query: 126 GNISVFTAR-ADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD 184
I ++ AD W + +H V S+S+ GSG +L S D
Sbjct: 171 NTIKLYKEDLADSDWSSFDTLVSHESTVWSISFD---------GSG-----NRLASCSDD 216
Query: 185 NTVKVWKLYN-G------------IWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA 231
TVK+W+ Y G +WK C A H+ V D++W GL +A+A
Sbjct: 217 QTVKIWQEYKPGNEFGVSCPDNTPVWKCVCTLA-GYHSRSVYDISWCKQSGL----LATA 271
Query: 232 SEDGKVIIWTVAREGDQWEGKV-----LHDFKTPVYRVSWSLTG-NILAVADGNNNVTLW 285
D V I+ E H V V W+ T +L + +V LW
Sbjct: 272 CGDDMVRIFKEVEGSSPHEPTFEMVGSKHAHSQDVNTVEWNPTVVGLLVTTSDDGDVKLW 331
Query: 286 E 286
+
Sbjct: 332 K 332
Score = 209 (78.6 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 87/301 (28%), Positives = 132/301 (43%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQH-LAK--LS-GHKGAVWEVAW 63
TGH G LAT D +I+I + SQ +AK LS GH + +VAW
Sbjct: 11 TGHRGRAWGAGWHPKGNVLATCGEDKTIRIWA--EDASQRWVAKTVLSDGHSRTIRDVAW 68
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+ P G LAS SFD TV IW + S E+ + E H++ V S+ W+ + G LA S
Sbjct: 69 S-P-CGQYLASASFDATVAIWDK-KSGEFECNATLEGHENEVKSVSWS--KSGSLLATCS 123
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGC 183
D ++ V+ + ++ + + H V V W P + + L S
Sbjct: 124 RDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPH------------EDI--LASASY 169
Query: 184 DNTVKVWK--LYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT 241
DNT+K++K L + W F L H V W+ + + +AS S+D V IW
Sbjct: 170 DNTIKLYKEDLADSDWSS--FDTLVSHESTV----WSISFDGSGNRLASCSDDQTVKIWQ 223
Query: 242 VAREGDQWEGKVLHDFKTPV---------------YRVSWSLTGNILAVADGNNNVTLWE 286
+ G+++ G D TPV Y +SW +LA A G++ V +++
Sbjct: 224 EYKPGNEF-GVSCPD-NTPVWKCVCTLAGYHSRSVYDISWCKQSGLLATACGDDMVRIFK 281
Query: 287 E 287
E
Sbjct: 282 E 282
Score = 184 (69.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 38/111 (34%), Positives = 60/111 (54%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSID 109
L+GH+G W W HPK G++LA+C D T+ IW E S W+ V D H ++ +
Sbjct: 10 LTGHRGRAWGAGW-HPK-GNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIRDVA 67
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
W+P G LA S D ++++ ++ G ++ + + H V SVSW+ S
Sbjct: 68 WSP--CGQYLASASFDATVAIWDKKS-GEFECNATLEGHENEVKSVSWSKS 115
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 39/127 (30%), Positives = 63/127 (49%)
Query: 164 GALVGSGFLDPVQKLCSGGCDNTVKVW-KLYNGIWKMDCFPALQMHTDWVRDVAWAPNLG 222
G G+G+ L + G D T+++W + + W + H+ +RDVAW+P G
Sbjct: 15 GRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLS-DGHSRTIRDVAWSP-CG 72
Query: 223 LPKSTIASASEDGKVIIWTVAREGDQWE-GKVLHDFKTPVYRVSWSLTGNILAVADGNNN 281
+ASAS D V IW ++ ++E L + V VSWS +G++LA + +
Sbjct: 73 ---QYLASASFDATVAIWD--KKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSRDKS 127
Query: 282 VTLWEEA 288
V +WE A
Sbjct: 128 VWVWEVA 134
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 80/296 (27%), Positives = 127/296 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPK 67
GH+ + VA G A+ D +I+I + NT LS GHK + E+ W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLNGNTWTTKTILSDGHKRTIREIRWS-P- 69
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G LAS SFDGT IW + +S E+ + E H++ V S+ W+ GL C S D +
Sbjct: 70 CGQYLASASFDGTTAIWSK-SSGEFECNATLEGHENEVKSVSWS-RSGGLLATC-SRDKS 126
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTV 187
+ ++ D ++ + + H V V W P+ + L S DNT+
Sbjct: 127 VWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTK--------------ELLASASYDNTI 172
Query: 188 KVWK--LYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245
K++ + W DC L HT V W+ + + S S+D + IW
Sbjct: 173 KMFAEDALDSDW--DCVATLSSHTSTV----WSIDFDATGERLVSCSDDTSLKIWQAYHP 226
Query: 246 GDQWEGKVLHDFKT--------------PVYRVSWSLTGNILAVADGNNNVTLWEE 287
G+ G D +T +Y VSW N++A A G++ + +++E
Sbjct: 227 GND-AGVATPDKQTVWKCVCTISGQHSRAIYDVSWCKLTNLIATACGDDGIRIFKE 281
Score = 190 (71.9 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 42/111 (37%), Positives = 61/111 (54%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSID 109
L GHKG +W VAW HPK G++ ASC D + IW N N W + D HK ++ I
Sbjct: 10 LQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSL-NGNTWTTKTILSDGHKRTIREIR 66
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
W+P G LA S DG ++++ ++ G ++ + + H V SVSW+ S
Sbjct: 67 WSP--CGQYLASASFDGTTAIWS-KSSGEFECNATLEGHENEVKSVSWSRS 114
Score = 181 (68.8 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 80/296 (27%), Positives = 129/296 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ GH+ T+ ++ G+ LA+AS D + I + + A L GH+ V V+W+
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWS- 112
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP-HELGLCLACGSS 124
+ G +LA+CS D +V IW+ +E+ V H V + W P EL LA S
Sbjct: 113 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKEL---LASASY 168
Query: 125 DGNISVFTARA-DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSG-- 181
D I +F A D WD +H V S+ + A G + S D K+
Sbjct: 169 DNTIKMFAEDALDSDWDCVATLSSHTSTVWSIDF---DATGERLVSCSDDTSLKIWQAYH 225
Query: 182 -GCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA-SEDG-KVI 238
G D V +WK C + Q H+ + DV+W L IA+A +DG ++
Sbjct: 226 PGNDAGVATPDKQT-VWKCVCTISGQ-HSRAIYDVSWCKLTNL----IATACGDDGIRIF 279
Query: 239 IWTVAREGDQWEGKVL------HDFKTPVYRVSWS--LTGNILAVADGNNNVTLWE 286
T + D+ + L HD V V W+ + G +++ +D + + +W+
Sbjct: 280 KETSDSKRDEPTFEQLTAEEGAHD--QDVNSVEWNPVVEGQLISCSD-DGTIKVWK 332
Score = 129 (50.5 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 33/110 (30%), Positives = 52/110 (47%)
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
S G D +++W L W + H +R++ W+P G +ASAS DG I
Sbjct: 31 SCGEDKAIRIWSLNGNTWTTKTILS-DGHKRTIREIRWSP-CG---QYLASASFDGTTAI 85
Query: 240 WTVAREGDQWE-GKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288
W+ + ++E L + V VSWS +G +LA + +V +WE A
Sbjct: 86 WS--KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVA 133
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 58/204 (28%), Positives = 80/204 (39%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQH--LAKLSGHKGAVWEVAWAHPK 67
H V V + LA+AS D +IK+ S +A LS H VW + +
Sbjct: 147 HTQDVKRVVWHPTKELLASASYDNTIKMFAEDALDSDWDCVATLSSHTSTVWSIDF--DA 204
Query: 68 FGSILASCSFDGTVIIWKE---GNSNEWI---KDHVFE-------DHKSSVNSIDWAPHE 114
G L SCS D ++ IW+ GN K V++ H ++ + W
Sbjct: 205 TGERLVSCSDDTSLKIWQAYHPGNDAGVATPDKQTVWKCVCTISGQHSRAIYDVSWCKLT 264
Query: 115 LGLCLACGSSDGNISVFTARADGGWDTSRIDQ------AHPVGVTSVSWAPSTAPGALVG 168
+ ACG DG I +F +D D +Q AH V SV W P G L+
Sbjct: 265 NLIATACGD-DG-IRIFKETSDSKRDEPTFEQLTAEEGAHDQDVNSVEWNP-VVEGQLIS 321
Query: 169 SGFLDPVQKLCSGGCDNTVKVWKL 192
CS D T+KVWK+
Sbjct: 322 ----------CSD--DGTIKVWKM 333
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 84/297 (28%), Positives = 133/297 (44%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAWAHP 66
TGHED V VA G LA+ D +I+I G G+ GH+ + + W+ P
Sbjct: 2 TGHEDRVWSVAWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWS-P 60
Query: 67 KFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG 126
G+ LAS SFD T IW + S E+ + E H++ V S+DW+ L CG D
Sbjct: 61 -CGTFLASASFDATTCIWDQ-KSGEFECNATLEGHENEVKSVDWSVSG-SLLATCGR-DK 116
Query: 127 NISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNT 186
++ ++ + D ++ + + +H V V W P+ ++ S CS D+T
Sbjct: 117 SVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPTKE---ILAS---------CS--YDDT 162
Query: 187 VKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREG 246
+K++K W C L+ H V W+ + I S S+D V IW G
Sbjct: 163 IKLYKEDEDDWS--CCDTLEGHESTV----WSISFDGSGDRIVSCSDDKTVRIWKSYPPG 216
Query: 247 DQWEGKVL----------------HDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287
+Q EG V+ HD +T +Y V WS ++A A G++ + +++E
Sbjct: 217 NQ-EGVVVSGKHTKWKCVCVLSGYHD-RT-IYDVHWSKVSGLIATASGDDCIRIFKE 270
Score = 167 (63.8 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 40/112 (35%), Positives = 63/112 (56%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW-KEGNSNEWIKDHVFED-HKSSVNSI 108
++GH+ VW VAW+ P G +LASC D T+ IW KEG+ +WI + ED H+ ++ S+
Sbjct: 1 MTGHEDRVWSVAWS-PN-GFVLASCGGDKTIRIWGKEGD--KWICKTILEDGHQRTIRSL 56
Query: 109 DWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
W+P G LA S D ++ ++ G ++ + + H V SV W+ S
Sbjct: 57 GWSP--CGTFLASASFDATTCIWDQKS-GEFECNATLEGHENEVKSVDWSVS 105
Score = 159 (61.0 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 75/287 (26%), Positives = 112/287 (39%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+E GH+ T+ + G LA+AS D + I + + A L GH+ V V W+
Sbjct: 45 LEDGHQRTIRSLGWSPCGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSV 104
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
GS+LA+C D +V IW+ +E+ V H V + W P + + +C S D
Sbjct: 105 S--GSLLATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPTK-EILASC-SYD 160
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDN 185
I ++ D W + H V S+S+ S + K G
Sbjct: 161 DTIKLYKEDEDD-WSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRIWKSYPPGNQE 219
Query: 186 TVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245
V V + WK C + H + DV W+ GL IA+AS D + I+
Sbjct: 220 GVVVSGKHTK-WKCVCVLS-GYHDRTIYDVHWSKVSGL----IATASGDDCIRIFKEDTN 273
Query: 246 GDQWEGK---VLHDFKT---PVYRVSWSLTG-NILAVADGNNNVTLW 285
D+ + V K V + W NILA + V LW
Sbjct: 274 SDRNQPSFQLVATQRKAHSMDVNSICWHPKDENILATCSDDGTVKLW 320
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 81/296 (27%), Positives = 129/296 (43%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPK 67
GH+ + VA G A+ D +I+I + NT LS GHK + E+ W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIQWS-P- 69
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G LAS SFD T IW + +S E+ + E H++ V S+ W+ GL C S D +
Sbjct: 70 CGQYLASASFDATTAIWSK-SSGEFECNATLEGHENEVKSVSWS-RSGGLLATC-SRDKS 126
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTV 187
+ ++ D ++ + + +H V V W P+ + L S DNT+
Sbjct: 127 VWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTK--------------EILASASYDNTI 172
Query: 188 KVW--KLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245
K++ + + W DC L HT + W + + S S+D V IW
Sbjct: 173 KMYAEEPIDNDW--DCTATLTSHTSTI----WGIDFDADGERLVSCSDDTTVKIWRAYHP 226
Query: 246 G--------DQ---WEG--KVLHDFKTPVYRVSW-SLTGNILAVADGNNNVTLWEE 287
G DQ W+ + +Y VSW LTG ++A A G++ + +++E
Sbjct: 227 GNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTG-LIATACGDDGIRIFKE 281
Score = 182 (69.1 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 77/295 (26%), Positives = 128/295 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ GH+ T+ ++ G+ LA+AS D + I + + A L GH+ V V+W+
Sbjct: 54 LSDGHKRTIREIQWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS- 112
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
+ G +LA+CS D +V IW+ +E+ V H V + W P + LA S D
Sbjct: 113 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKE--ILASASYD 169
Query: 126 GNISVFTARA-DGGWDTSRIDQAHPVGVTSVSWAPS-TAPGALVGSGFLDPVQKLCSG-G 182
I ++ D WD + +H TS W A G + S D K+
Sbjct: 170 NTIKMYAEEPIDNDWDCTATLTSH----TSTIWGIDFDADGERLVSCSDDTTVKIWRAYH 225
Query: 183 CDNTVKVWKL-YNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA-SEDG-KVII 239
N+ V +WK C + Q H+ + DV+W GL IA+A +DG ++
Sbjct: 226 PGNSAGVATPDQQTVWKCVCTLSGQ-HSRAIYDVSWCKLTGL----IATACGDDGIRIFK 280
Query: 240 WTVAREGDQWEGKVL------HDFKTPVYRVSWS--LTGNILAVADGNNNVTLWE 286
T + D+ + L HD V V W+ + G +++ +D + + +W+
Sbjct: 281 ETSDSKPDEPTFEQLTAEESAHD--QDVNSVQWNPVVAGQLISCSD-DGTIKIWK 332
Score = 179 (68.1 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 40/111 (36%), Positives = 59/111 (53%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSID 109
L GHKG +W VAW HPK G++ ASC D + IW N W + D HK ++ I
Sbjct: 10 LQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSL-TGNTWSTKTILSDGHKRTIREIQ 66
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
W+P G LA S D ++++ ++ G ++ + + H V SVSW+ S
Sbjct: 67 WSP--CGQYLASASFDATTAIWS-KSSGEFECNATLEGHENEVKSVSWSRS 114
Score = 137 (53.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 67/244 (27%), Positives = 102/244 (41%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAWAHPK 67
GHE+ V V+ G LAT S D S+ I V G++ + A L+ H V V W HP
Sbjct: 101 GHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVW-HPT 159
Query: 68 FGSILASCSFDGTVIIW-KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG 126
ILAS S+D T+ ++ +E N+W H S++ ID+ L ++C S D
Sbjct: 160 -KEILASASYDNTIKMYAEEPIDNDWDCTATLTSHTSTIWGIDFDADGERL-VSC-SDDT 216
Query: 127 NISVFTARADGGWDTSRIDQAHPVG--VTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD 184
+ ++ A G V V ++S S A + + C D
Sbjct: 217 TVKIWRAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATACG---D 273
Query: 185 NTVKVWKLYNGIWKMD--CFPAL----QMHTDWVRDVAWAPNLGLPKSTIASASEDGKVI 238
+ ++++K + K D F L H V V W P + + S S+DG +
Sbjct: 274 DGIRIFKETSDS-KPDEPTFEQLTAEESAHDQDVNSVQWNPVVA---GQLISCSDDGTIK 329
Query: 239 IWTV 242
IW V
Sbjct: 330 IWKV 333
Score = 124 (48.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
S G D +++W L W + H +R++ W+P G +ASAS D I
Sbjct: 31 SCGEDKAIRIWSLTGNTWSTKTILS-DGHKRTIREIQWSP-CG---QYLASASFDATTAI 85
Query: 240 WTVAREGDQWE-GKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288
W+ + ++E L + V VSWS +G +LA + +V +WE A
Sbjct: 86 WS--KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVA 133
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 80/298 (26%), Positives = 129/298 (43%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAWAHPK 67
GH+ + VA G A+ D +I+I + GN+ S GHK + E+ W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLSGNSWSTKTILSDGHKRTIREIRWS-P- 69
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G LAS SFD T IW + +S E+ + E H++ V S+ W+ GL C S D +
Sbjct: 70 CGQYLASASFDATTAIWSK-SSGEFECNATLEGHENEVKSVSWSKSG-GLLATC-SRDKS 126
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTV 187
+ ++ D ++ + + H V V W P+ + L S DNT+
Sbjct: 127 VWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTK--------------EILASASYDNTI 172
Query: 188 KVW--KLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245
K++ + W DC L HT V W+ + + S S+D + IW
Sbjct: 173 KMFAESALDSDW--DCTATLSSHTSTV----WSIDFDADGERLVSCSDDTTLKIWRAYHP 226
Query: 246 GDQWEGKVLHDFKT--------------PVYRVSW-SLTGNILAVADGNNNVTLWEEA 288
G+ G D +T +Y VSW LTG ++A A G++ + +++E+
Sbjct: 227 GND-AGVATPDKQTVWKCVCTLSGQHSRAIYDVSWCKLTG-LIATACGDDGIRIFKES 282
Score = 206 (77.6 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 79/303 (26%), Positives = 134/303 (44%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ GH+ T+ ++ G+ LA+AS D + I + + A L GH+ V V+W+
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS- 112
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
K G +LA+CS D +V IW+ +E+ V H V + W P + LA S D
Sbjct: 113 -KSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKE--ILASASYD 169
Query: 126 GNISVFTARA-DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD 184
I +F A D WD + +H V S+ + A G ++L S D
Sbjct: 170 NTIKMFAESALDSDWDCTATLSSHTSTVWSIDF---DADG-----------ERLVSCSDD 215
Query: 185 NTVKVWKLYN-G------------IWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA 231
T+K+W+ Y+ G +WK C + Q H+ + DV+W GL IA+A
Sbjct: 216 TTLKIWRAYHPGNDAGVATPDKQTVWKCVCTLSGQ-HSRAIYDVSWCKLTGL----IATA 270
Query: 232 SEDGKVIIWTVA----REGDQWEGKVLHD--FKTPVYRVSWS--LTGNILAVADGNNNVT 283
D + I+ + R+ +E + + V V W+ + G +++ +D + +
Sbjct: 271 CGDDGIRIFKESSDSKRDEPTFEQVTAEESAHEQDVNSVEWNPVMAGQLISCSD-DGTIK 329
Query: 284 LWE 286
+W+
Sbjct: 330 IWK 332
Score = 177 (67.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 42/112 (37%), Positives = 60/112 (53%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK-EGNSNEWIKDHVFED-HKSSVNSI 108
L GHKG +W VAW HPK G+ ASC D + IW GNS W + D HK ++ I
Sbjct: 10 LQGHKGRIWGVAW-HPK-GNTFASCGEDKAIRIWSLSGNS--WSTKTILSDGHKRTIREI 65
Query: 109 DWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
W+P G LA S D ++++ ++ G ++ + + H V SVSW+ S
Sbjct: 66 RWSP--CGQYLASASFDATTAIWS-KSSGEFECNATLEGHENEVKSVSWSKS 114
Score = 121 (47.7 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 56/188 (29%), Positives = 76/188 (40%)
Query: 26 LATASSDYSIKIIGVGNNTSQH--LAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83
LA+AS D +IK+ S A LS H VW + + G L SCS D T+ I
Sbjct: 163 LASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDAD--GERLVSCSDDTTLKI 220
Query: 84 WKE---GNSNEWI---KDHVFE-------DHKSSVNSIDWAPHELGLCLACGSSDGNISV 130
W+ GN K V++ H ++ + W + ACG DG I +
Sbjct: 221 WRAYHPGNDAGVATPDKQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATACGD-DG-IRI 278
Query: 131 FTARADGGWDTSRIDQ------AHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD 184
F +D D +Q AH V SV W P A G L+ CS D
Sbjct: 279 FKESSDSKRDEPTFEQVTAEESAHEQDVNSVEWNPVMA-GQLIS----------CSD--D 325
Query: 185 NTVKVWKL 192
T+K+WK+
Sbjct: 326 GTIKIWKM 333
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 83/297 (27%), Positives = 126/297 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPK 67
GH+ + VA G A+ D +I+I NT LS GHK + EV W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNSFASCGEDKAIRIWSQSGNTWTTKTILSDGHKRTIREVRWS-P- 69
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G LAS SFD T IW + N + E H++ V S+ W+ GL C S D +
Sbjct: 70 CGEYLASASFDATTAIWSKHECNATL-----EGHENEVKSVSWSQSG-GLLATC-SRDKS 122
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTV 187
+ ++ D ++ + + AH V V W PS + L S DNT+
Sbjct: 123 VWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPSK--------------EILASASYDNTI 168
Query: 188 KVW--KLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245
K++ + W DC L HT V W+ + + S S+D + IW
Sbjct: 169 KMYAESALDSDW--DCTATLSSHTSTV----WSIDFEADGERLVSCSDDTTLKIWRAYHP 222
Query: 246 GDQ-----------WEG--KVLHDFKTPVYRVSW-SLTGNILAVADGNNNVTLWEEA 288
G++ W+ V VY VSW LTG ++A A G++ + +++E+
Sbjct: 223 GNEAGIATPDKTTVWKCVCTVAGQHSRAVYDVSWCKLTG-LIASACGDDGIRIFKES 278
Score = 193 (73.0 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 84/305 (27%), Positives = 134/305 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHL--AKLSGHKGAVWEVAW 63
+ GH+ T+ +V G+ LA+AS D + I S+H A L GH+ V V+W
Sbjct: 54 LSDGHKRTIREVRWSPCGEYLASASFDATTAI------WSKHECNATLEGHENEVKSVSW 107
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+ G +LA+CS D +V IW+ +E+ V H V + W P + LA S
Sbjct: 108 SQS--GGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPSKE--ILASAS 163
Query: 124 SDGNISVFTARA-DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGG 182
D I ++ A D WD + +H V S+ + A G ++L S
Sbjct: 164 YDNTIKMYAESALDSDWDCTATLSSHTSTVWSIDFE---ADG-----------ERLVSCS 209
Query: 183 CDNTVKVWKLYN-----GI--------WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIA 229
D T+K+W+ Y+ GI WK C A Q H+ V DV+W GL IA
Sbjct: 210 DDTTLKIWRAYHPGNEAGIATPDKTTVWKCVCTVAGQ-HSRAVYDVSWCKLTGL----IA 264
Query: 230 SASEDGKVIIWTVAREG--DQWEGKVL----HDFKTPVYRVSWS--LTGNILAVADGNNN 281
SA D + I+ + + D+ ++L + V V W+ G +++ +D +
Sbjct: 265 SACGDDGIRIFKESSDSKRDEPTFELLTAEESAHEQDVNAVEWNPVTAGQLISCSD-DGT 323
Query: 282 VTLWE 286
+ +W+
Sbjct: 324 IKIWK 328
Score = 161 (61.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 38/111 (34%), Positives = 56/111 (50%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSID 109
L GHKG +W VAW HPK G+ ASC D + IW + + N W + D HK ++ +
Sbjct: 10 LQGHKGRIWGVAW-HPK-GNSFASCGEDKAIRIWSQ-SGNTWTTKTILSDGHKRTIREVR 66
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
W+P G LA S D ++++ + + + H V SVSW+ S
Sbjct: 67 WSP--CGEYLASASFDATTAIWSKH-----ECNATLEGHENEVKSVSWSQS 110
Score = 123 (48.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 58/188 (30%), Positives = 77/188 (40%)
Query: 26 LATASSDYSIKIIGVGNNTSQH--LAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83
LA+AS D +IK+ S A LS H VW + + G L SCS D T+ I
Sbjct: 159 LASASYDNTIKMYAESALDSDWDCTATLSSHTSTVWSIDFEAD--GERLVSCSDDTTLKI 216
Query: 84 WKE---GN---------SNEW-IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISV 130
W+ GN + W V H +V + W + ACG DG I +
Sbjct: 217 WRAYHPGNEAGIATPDKTTVWKCVCTVAGQHSRAVYDVSWCKLTGLIASACGD-DG-IRI 274
Query: 131 FTARADGGWD--TSRI----DQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD 184
F +D D T + + AH V +V W P TA G L+ CS D
Sbjct: 275 FKESSDSKRDEPTFELLTAEESAHEQDVNAVEWNPVTA-GQLIS----------CSD--D 321
Query: 185 NTVKVWKL 192
T+K+WKL
Sbjct: 322 GTIKIWKL 329
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 82/297 (27%), Positives = 128/297 (43%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPK 67
GH+ + VA G A+ D +I+I + NT LS GHK + E+ W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWS-P- 69
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G LAS SFD T IW + +S E+ + E H++ V S+ W+ GL C S D +
Sbjct: 70 CGQYLASASFDATTAIWSK-SSGEFECNATLEGHENEVKSVSWS-RSGGLLATC-SRDKS 126
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTV 187
+ ++ D ++ + + H V V W P+ L S DNT+
Sbjct: 127 VWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTK--------------DILASASYDNTI 172
Query: 188 KVW--KLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245
K++ + + W DC L HT V W + + S S+D + IW
Sbjct: 173 KMFAEEPIDNDW--DCTATLTSHTSTV----WGIDFDADGERLVSCSDDTTIKIWRAYHP 226
Query: 246 G--------DQ---WEG--KVLHDFKTPVYRVSW-SLTGNILAVADGNNNVTLWEEA 288
G DQ W+ V +Y VSW LTG ++A A G++ + +++E+
Sbjct: 227 GNTAGVATPDQQTVWKCVCTVSGQHSRAIYDVSWCKLTG-LIATACGDDGIRIFKES 282
Score = 185 (70.2 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 76/293 (25%), Positives = 126/293 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ GH+ T+ ++ G+ LA+AS D + I + + A L GH+ V V+W+
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS- 112
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
+ G +LA+CS D +V IW+ +E+ V H V + W P + LA S D
Sbjct: 113 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKD--ILASASYD 169
Query: 126 GNISVFTARA-DGGWDTSRIDQAHPVGVTSVSWAPS-TAPGALVGSGFLDPVQKLCSG-G 182
I +F D WD + +H TS W A G + S D K+
Sbjct: 170 NTIKMFAEEPIDNDWDCTATLTSH----TSTVWGIDFDADGERLVSCSDDTTIKIWRAYH 225
Query: 183 CDNTVKVWKL-YNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT 241
NT V +WK C + Q H+ + DV+W GL IA+A D + I+
Sbjct: 226 PGNTAGVATPDQQTVWKCVCTVSGQ-HSRAIYDVSWCKLTGL----IATACGDDGIRIFK 280
Query: 242 VAREG--DQ--WEGKVLHD--FKTPVYRVSWS--LTGNILAVADGNNNVTLWE 286
+ + D+ +E + V V W+ + G +++ +D + + +W+
Sbjct: 281 ESSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSD-DGTIKIWK 332
Score = 177 (67.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 40/111 (36%), Positives = 59/111 (53%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSID 109
L GHKG +W VAW HPK G++ ASC D + IW N W + D HK ++ I
Sbjct: 10 LQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSL-TGNTWSTKTILSDGHKRTIREIR 66
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
W+P G LA S D ++++ ++ G ++ + + H V SVSW+ S
Sbjct: 67 WSP--CGQYLASASFDATTAIWS-KSSGEFECNATLEGHENEVKSVSWSRS 114
Score = 137 (53.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 69/244 (28%), Positives = 102/244 (41%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAWAHPK 67
GHE+ V V+ G LAT S D S+ I V G++ + A L+ H V V W HP
Sbjct: 101 GHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVW-HPT 159
Query: 68 FGSILASCSFDGTVIIW-KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG 126
ILAS S+D T+ ++ +E N+W H S+V ID+ L ++C S D
Sbjct: 160 -KDILASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERL-VSC-SDDT 216
Query: 127 NISVFTARADGGWDTSRIDQAHPVG--VTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD 184
I ++ A G V V +VS S A + + C D
Sbjct: 217 TIKIWRAYHPGNTAGVATPDQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACG---D 273
Query: 185 NTVKVWKLYNGIWKMD--CFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVI 238
+ ++++K + K D F + H V V W P + + S S+DG +
Sbjct: 274 DGIRIFKESSDS-KPDEPTFEQITAEEGAHDQDVNSVQWNPVVA---GQLISCSDDGTIK 329
Query: 239 IWTV 242
IW V
Sbjct: 330 IWKV 333
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 222 (83.2 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 86/307 (28%), Positives = 137/307 (44%)
Query: 1 MPPQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
+P + GH T+ DVA G+ LA+AS D ++ I + + A L GH+ V
Sbjct: 50 VPKTVLSDGHTRTIRDVAWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKS 109
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA 120
V+W+ K G++LA+CS D +V IW+ +E+ V H V ++W P+E LA
Sbjct: 110 VSWS--KSGALLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNED--VLA 165
Query: 121 CGSSDGNISVFTAR-ADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLC 179
S D I ++ AD W + +H V S+++ A G+ + S C
Sbjct: 166 SASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAF---DASGSRLAS---------C 213
Query: 180 SGGCDNTVKVWKLY-----------NG---IWKMDCFPALQMHTDWVRDVAWAPNLGLPK 225
S D TV++W+ Y +G +WK C + H+ V D++W GL
Sbjct: 214 SD--DQTVRIWQEYKPGNEFGVACPDGKTPVWKCVCTLS-GFHSRAVYDISWCKKTGL-- 268
Query: 226 STIASASEDGKVIIWT-VARE-GDQWEGKVL---HDFKTPVYRVSWSLT-GNILAVADGN 279
IA+A D V I+ VA ++ +++ H V WS T +L +
Sbjct: 269 --IATACGDDMVRIFREVAGSPANEPTFEMVASKHAHSQDANTVEWSPTVAGLLVTTSDD 326
Query: 280 NNVTLWE 286
+V LW+
Sbjct: 327 GDVKLWK 333
Score = 209 (78.6 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 84/300 (28%), Positives = 134/300 (44%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAK--LS-GHKGAVWEVAWA 64
+GH V LAT D +I+I + T + + K LS GH + +VAW+
Sbjct: 11 SGHRGRVWGAGWHPRDPVLATCGEDKTIRI-WADDGTGRWVPKTVLSDGHTRTIRDVAWS 69
Query: 65 HPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSS 124
P G LAS SFD TV IW + S E+ + E H++ V S+ W+ + G LA S
Sbjct: 70 -P-CGRFLASASFDATVAIW-DRRSGEFECNATLEGHENEVKSVSWS--KSGALLATCSR 124
Query: 125 DGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD 184
D ++ ++ + ++ + + H V V W P+ + V L S D
Sbjct: 125 DKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPN------------EDV--LASASYD 170
Query: 185 NTVKVWK--LYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV 242
NT+++++ L + W F L H V +A+ + G S +AS S+D V IW
Sbjct: 171 NTIQLYREDLADSDWSS--FDTLASHDSTVWSIAFDAS-G---SRLASCSDDQTVRIWQE 224
Query: 243 AREGDQWEGKVLHDFKTPV---------------YRVSWSLTGNILAVADGNNNVTLWEE 287
+ G+++ G D KTPV Y +SW ++A A G++ V ++ E
Sbjct: 225 YKPGNEF-GVACPDGKTPVWKCVCTLSGFHSRAVYDISWCKKTGLIATACGDDMVRIFRE 283
Score = 180 (68.4 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 40/120 (33%), Positives = 64/120 (53%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSID 109
LSGH+G VW W HP+ +LA+C D T+ IW + + W+ V D H ++ +
Sbjct: 10 LSGHRGRVWGAGW-HPR-DPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIRDVA 67
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 169
W+P G LA S D ++++ R+ G ++ + + H V SVSW+ S GAL+ +
Sbjct: 68 WSP--CGRFLASASFDATVAIWDRRS-GEFECNATLEGHENEVKSVSWSKS---GALLAT 121
Score = 143 (55.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 45/128 (35%), Positives = 62/128 (48%)
Query: 164 GALVGSGF--LDPVQKLCSGGCDNTVKVWKLYN-GIWKMDCFPALQMHTDWVRDVAWAPN 220
G + G+G+ DPV C G D T+++W G W + HT +RDVAW+P
Sbjct: 15 GRVWGAGWHPRDPVLATC--GEDKTIRIWADDGTGRWVPKTVLS-DGHTRTIRDVAWSP- 70
Query: 221 LGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNN 280
G +ASAS D V IW R G+ L + V VSWS +G +LA +
Sbjct: 71 CG---RFLASASFDATVAIWD-RRSGEFECNATLEGHENEVKSVSWSKSGALLATCSRDK 126
Query: 281 NVTLWEEA 288
+V +WE A
Sbjct: 127 SVWIWEVA 134
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 219 (82.2 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 91/296 (30%), Positives = 137/296 (46%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIG-VGNNTSQHLAKLSGHKGAVWEVA 62
QK + VA + G LA+ D +I+I G G++ GH+ V +VA
Sbjct: 9 QKFNAHPDSRCWYVAWNPKGTLLASCGGDRTIRIWGREGDSWECKTVLQDGHQRTVRKVA 68
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSN-EWIKDHVFEDHKSSVNSIDWAPHELGLCLAC 121
W+ P G+ LAS SFD T IWK+ N + E + V E H++ V + WAP G LA
Sbjct: 69 WS-P-CGNYLASASFDATTCIWKKKNDDFECLT--VLEGHENEVKCVAWAPS--GNLLAT 122
Query: 122 GSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSG 181
S D ++ ++ + ++ + +H V V W P+ L+ S CS
Sbjct: 123 CSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQE---LLAS---------CS- 169
Query: 182 GCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT 241
DN V V+K + W +C L+ HT V + + P+ G +AS S+D V IW
Sbjct: 170 -YDNNVCVYKEEDDDW--ECRATLEGHTSTVWGLTFDPS-G---QRLASCSDDCTVKIWK 222
Query: 242 VAR-EGDQ------WEGK-VLHDFK-TPVYRVSWS-LTGNILAVADGNNNVTLWEE 287
+ EG Q W+ L F VY ++W LTG LA A G++ V +++E
Sbjct: 223 ECQPEGGQEGTDAAWKCVCTLSGFHGRTVYDIAWCPLTG-ALATACGDDGVRVFKE 277
Score = 161 (61.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 70/244 (28%), Positives = 105/244 (43%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGN-NTSQHLAKLSGHKGAVWEVAWAHPK 67
GHE+ V VA G LAT S D S+ I V N + ++ ++ H V V W HP
Sbjct: 103 GHENEVKCVAWAPSGNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVW-HPT 161
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
+LASCS+D V ++KE ++W E H S+V + + P G LA S D
Sbjct: 162 -QELLASCSYDNNVCVYKE-EDDDWECRATLEGHTSTVWGLTFDPS--GQRLASCSDDCT 217
Query: 128 ISVFT-ARADGG-------WD-TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
+ ++ + +GG W + H V ++W P T GAL + D V+
Sbjct: 218 VKIWKECQPEGGQEGTDAAWKCVCTLSGFHGRTVYDIAWCPLT--GALATACGDDGVRVF 275
Query: 179 CSGG-CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPN-LGLPKSTIASASEDGK 236
D + L + K HT V +AW P GL + S S++G+
Sbjct: 276 KEDETADPDQPAFSLSAHVPKA--------HTQDVNCIAWHPKEAGL----LVSCSDNGE 323
Query: 237 VIIW 240
+ +W
Sbjct: 324 IAVW 327
Score = 157 (60.3 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 43/122 (35%), Positives = 65/122 (53%)
Query: 42 NNTSQHLAKLSGHKGA-VWEVAWAHPKFGSILASCSFDGTVIIW-KEGNSNEWIKDHVFE 99
N+T L K + H + W VAW +PK G++LASC D T+ IW +EG+S W V +
Sbjct: 2 NDTLALLQKFNAHPDSRCWYVAW-NPK-GTLLASCGGDRTIRIWGREGDS--WECKTVLQ 57
Query: 100 D-HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWA 158
D H+ +V + W+P G LA S D ++ + D ++ + + H V V+WA
Sbjct: 58 DGHQRTVRKVAWSP--CGNYLASASFDATTCIWKKKNDD-FECLTVLEGHENEVKCVAWA 114
Query: 159 PS 160
PS
Sbjct: 115 PS 116
Score = 131 (51.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 55/177 (31%), Positives = 73/177 (41%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ H V V + LA+ S D ++ + ++ + A L GH VW + +
Sbjct: 145 VVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTF-D 203
Query: 66 PKFGSILASCSFDGTVIIWKE--------GNSNEWIKDHVFED-HKSSVNSIDWAPHELG 116
P G LASCS D TV IWKE G W H +V I W P
Sbjct: 204 PS-GQRLASCSDDCTVKIWKECQPEGGQEGTDAAWKCVCTLSGFHGRTVYDIAWCPLTGA 262
Query: 117 LCLACGSSDGNISVF----TARADG-GWDTS-RIDQAHPVGVTSVSWAPSTAPGALV 167
L ACG DG + VF TA D + S + +AH V ++W P A G LV
Sbjct: 263 LATACGD-DG-VRVFKEDETADPDQPAFSLSAHVPKAHTQDVNCIAWHPKEA-GLLV 316
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 219 (82.2 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 80/296 (27%), Positives = 126/296 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPK 67
GH+ + VA G A+ D +I+I + NT LS GHK + E+ W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWS-P- 69
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G LAS SFD T IW + +S E+ + E H++ V S+ W+ GL C S D +
Sbjct: 70 CGQYLASASFDATTAIWSK-SSGEFECNATLEGHENEVKSVSWS-RSGGLLATC-SRDKS 126
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTV 187
+ ++ D ++ + + H V V W P+ L S DNT+
Sbjct: 127 VWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTK--------------DVLASASYDNTI 172
Query: 188 KVW--KLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245
K++ + + W DC L HT V W + + S S+D + IW
Sbjct: 173 KMFAEEPIDNDW--DCTATLTSHTSTV----WGIDFDADGERLVSCSDDTTIKIWKAYHP 226
Query: 246 GDQ-----------WEG--KVLHDFKTPVYRVSW-SLTGNILAVADGNNNVTLWEE 287
G+ W+ V +Y VSW LTG ++A A G++ + +++E
Sbjct: 227 GNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTG-LIATACGDDGIRIFKE 281
Score = 188 (71.2 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 77/293 (26%), Positives = 127/293 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ GH+ T+ ++ G+ LA+AS D + I + + A L GH+ V V+W+
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS- 112
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
+ G +LA+CS D +V IW+ +E+ V H V + W P + LA S D
Sbjct: 113 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKD--VLASASYD 169
Query: 126 GNISVFTARA-DGGWDTSRIDQAHPVGVTSVSWAPS-TAPGALVGSGFLDPVQKLCSG-G 182
I +F D WD + +H TS W A G + S D K+
Sbjct: 170 NTIKMFAEEPIDNDWDCTATLTSH----TSTVWGIDFDADGERLVSCSDDTTIKIWKAYH 225
Query: 183 CDNTVKV-WKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA-SEDG-KVII 239
NT V +WK C + Q H+ + DV+W GL IA+A +DG ++
Sbjct: 226 PGNTAGVATPEQQTVWKCVCTVSGQ-HSRAIYDVSWCKLTGL----IATACGDDGIRIFK 280
Query: 240 WTVAREGDQ--WEGKVLHD--FKTPVYRVSWS--LTGNILAVADGNNNVTLWE 286
T + D+ +E + V V W+ + G +++ +D + + +W+
Sbjct: 281 ETSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSD-DGTIKIWK 332
Score = 177 (67.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 40/111 (36%), Positives = 59/111 (53%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSID 109
L GHKG +W VAW HPK G++ ASC D + IW N W + D HK ++ I
Sbjct: 10 LQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSL-TGNTWSTKTILSDGHKRTIREIR 66
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
W+P G LA S D ++++ ++ G ++ + + H V SVSW+ S
Sbjct: 67 WSP--CGQYLASASFDATTAIWS-KSSGEFECNATLEGHENEVKSVSWSRS 114
Score = 139 (54.0 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 68/245 (27%), Positives = 104/245 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAWAHPK 67
GHE+ V V+ G LAT S D S+ I V G++ + A L+ H V V W HP
Sbjct: 101 GHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVW-HPT 159
Query: 68 FGSILASCSFDGTVIIW-KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG 126
+LAS S+D T+ ++ +E N+W H S+V ID+ L ++C S D
Sbjct: 160 -KDVLASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERL-VSC-SDDT 216
Query: 127 NISVFTARADGGWDTSRIDQAHPVG--VTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD 184
I ++ A G + V V +VS S A + + C D
Sbjct: 217 TIKIWKAYHPGNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACG---D 273
Query: 185 NTVKVWKLYNGIWKMD--CFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVI 238
+ ++++K + K D F + H V V W P + + S S+DG +
Sbjct: 274 DGIRIFKETSDS-KPDEPTFEQITAEEGAHDQDVNSVQWNPVVA---GQLISCSDDGTIK 329
Query: 239 IWTVA 243
IW V+
Sbjct: 330 IWKVS 334
Score = 124 (48.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
S G D +++W L W + H +R++ W+P G +ASAS D I
Sbjct: 31 SCGEDKAIRIWSLTGNTWSTKTILS-DGHKRTIREIRWSP-CG---QYLASASFDATTAI 85
Query: 240 WTVAREGDQWE-GKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288
W+ + ++E L + V VSWS +G +LA + +V +WE A
Sbjct: 86 WS--KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVA 133
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 218 (81.8 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 78/296 (26%), Positives = 126/296 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPK 67
GH+ + VA G A+ D +I++ + NT LS GHK + E+ W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWS-P- 69
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G LAS SFD T IW + +S E+ + E H++ V S+ W+ GL C S D +
Sbjct: 70 CGQYLASASFDATTAIWSK-SSGEFECNATLEGHENEVKSVSWS-RSGGLLATC-SRDKS 126
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTV 187
+ ++ D ++ + + AH V V W P+ L S DNT+
Sbjct: 127 VWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTK--------------DILASASYDNTI 172
Query: 188 KVW--KLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245
K++ + W DC L HT V W+ + + S S+D + IW
Sbjct: 173 KMFAESQLDSDW--DCTATLSSHTSTV----WSIDFDAEGDRLVSCSDDKTLKIWRAYHP 226
Query: 246 GDQ-----------WEG--KVLHDFKTPVYRVSW-SLTGNILAVADGNNNVTLWEE 287
G+ W+ + +Y VSW LTG ++A G++ + +++E
Sbjct: 227 GNDAGIATPDKQSVWKCVCTLSGQHSRAIYDVSWCKLTG-LIATGCGDDGIRIFKE 281
Score = 187 (70.9 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 74/293 (25%), Positives = 131/293 (44%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ GH+ T+ ++ G+ LA+AS D + I + + A L GH+ V V+W+
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS- 112
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
+ G +LA+CS D +V IW+ +E+ V H V + W P + LA S D
Sbjct: 113 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKD--ILASASYD 169
Query: 126 GNISVFT-ARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSG--- 181
I +F ++ D WD + +H V S+ + A G + S D K+
Sbjct: 170 NTIKMFAESQLDSDWDCTATLSSHTSTVWSIDF---DAEGDRLVSCSDDKTLKIWRAYHP 226
Query: 182 GCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA-SEDG-KVII 239
G D + + +WK C + Q H+ + DV+W GL IA+ +DG ++
Sbjct: 227 GNDAGIATPDKQS-VWKCVCTLSGQ-HSRAIYDVSWCKLTGL----IATGCGDDGIRIFK 280
Query: 240 WTVAREGDQ--WEGKVLHD--FKTPVYRVSWS--LTGNILAVADGNNNVTLWE 286
T + D+ +E + + V V W+ + G +++ +D + + +W+
Sbjct: 281 ETSDSKRDEPTFEQLTAEETAHEQDVNAVEWNPAVAGQLISCSD-DGTIKIWK 332
Score = 177 (67.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 39/111 (35%), Positives = 60/111 (54%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSID 109
L GHKG +W VAW HPK G++ ASC D + +W + N W + D HK ++ I
Sbjct: 10 LQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRVWSL-SGNTWSTKTILSDGHKRTIREIR 66
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
W+P G LA S D ++++ ++ G ++ + + H V SVSW+ S
Sbjct: 67 WSP--CGQYLASASFDATTAIWS-KSSGEFECNATLEGHENEVKSVSWSRS 114
Score = 144 (55.7 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 69/243 (28%), Positives = 102/243 (41%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAWAHPK 67
GHE+ V V+ G LAT S D S+ I V G++ + A L+ H V V W HP
Sbjct: 101 GHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVW-HPT 159
Query: 68 FGSILASCSFDGTVIIWKEGN-SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG 126
ILAS S+D T+ ++ E ++W H S+V SID+ E ++C S D
Sbjct: 160 -KDILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDFDA-EGDRLVSC-SDDK 216
Query: 127 NISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGC-DN 185
+ ++ A G D I V S + + L + GC D+
Sbjct: 217 TLKIWRAYHPGN-DAG-IATPDKQSVWKCVCTLSGQHSRAIYDVSWCKLTGLIATGCGDD 274
Query: 186 TVKVWKLYNGIWKMD--CFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
++++K + K D F L H V V W P + + S S+DG + I
Sbjct: 275 GIRIFKETSDS-KRDEPTFEQLTAEETAHEQDVNAVEWNPAVA---GQLISCSDDGTIKI 330
Query: 240 WTV 242
W V
Sbjct: 331 WKV 333
Score = 136 (52.9 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 38/114 (33%), Positives = 60/114 (52%)
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG 235
Q L S D T +W +G + +C L+ H + V+ V+W+ + GL +A+ S D
Sbjct: 72 QYLASASFDATTAIWSKSSG--EFECNATLEGHENEVKSVSWSRSGGL----LATCSRDK 125
Query: 236 KVIIWTVAREGDQWE-GKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288
V IW VA + D++E VL+ V RV W T +ILA A +N + ++ E+
Sbjct: 126 SVWIWEVAGD-DEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAES 178
Score = 68 (29.0 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 17/68 (25%), Positives = 29/68 (42%)
Query: 93 IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRI-DQAHPVG 151
I +H + HK + + W P + +CG D I V++ + W T I H
Sbjct: 5 ILEHTLQGHKGRIWGVAWHPKG-NVFASCGE-DKAIRVWSLSGNT-WSTKTILSDGHKRT 61
Query: 152 VTSVSWAP 159
+ + W+P
Sbjct: 62 IREIRWSP 69
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 217 (81.4 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 80/296 (27%), Positives = 126/296 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPK 67
GH+ + VA G A+ D +I+I + NT LS GHK + E+ W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWGTKTILSDGHKRTIREIRWS-P- 69
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G LAS SFD T IW + +S E+ + E H++ V S+ W+ GL C S D +
Sbjct: 70 CGQYLASASFDATTAIWSK-SSGEFECNATLEGHENEVKSVSWS-RSGGLLATC-SRDKS 126
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTV 187
+ ++ D ++ + + H V V W P+ L S DNT+
Sbjct: 127 VWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTK--------------DVLASASYDNTI 172
Query: 188 KVW--KLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245
K++ + + W DC L HT V W + + S S+D + IW
Sbjct: 173 KMFAEEPIDNDW--DCTATLTSHTSTV----WGIDFDADGERLVSCSDDTTIKIWRAYHP 226
Query: 246 GDQ-----------WEG--KVLHDFKTPVYRVSW-SLTGNILAVADGNNNVTLWEE 287
G+ W+ V +Y VSW LTG ++A A G++ + +++E
Sbjct: 227 GNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTG-LIATACGDDGIRIFKE 281
Score = 187 (70.9 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 77/293 (26%), Positives = 127/293 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ GH+ T+ ++ G+ LA+AS D + I + + A L GH+ V V+W+
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS- 112
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
+ G +LA+CS D +V IW+ +E+ V H V + W P + LA S D
Sbjct: 113 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKD--VLASASYD 169
Query: 126 GNISVFTARA-DGGWDTSRIDQAHPVGVTSVSWAPS-TAPGALVGSGFLDPVQKLCSG-G 182
I +F D WD + +H TS W A G + S D K+
Sbjct: 170 NTIKMFAEEPIDNDWDCTATLTSH----TSTVWGIDFDADGERLVSCSDDTTIKIWRAYH 225
Query: 183 CDNTVKV-WKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA-SEDG-KVII 239
NT V +WK C + Q H+ + DV+W GL IA+A +DG ++
Sbjct: 226 PGNTAGVATPEQQTVWKCVCTVSGQ-HSRAIYDVSWCKLTGL----IATACGDDGIRIFK 280
Query: 240 WTVAREGDQ--WEGKVLHD--FKTPVYRVSWS--LTGNILAVADGNNNVTLWE 286
T + D+ +E + V V W+ + G +++ +D + + +W+
Sbjct: 281 ETSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSD-DGTIKIWK 332
Score = 175 (66.7 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 40/111 (36%), Positives = 59/111 (53%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSID 109
L GHKG +W VAW HPK G++ ASC D + IW N W + D HK ++ I
Sbjct: 10 LQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSL-TGNTWGTKTILSDGHKRTIREIR 66
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
W+P G LA S D ++++ ++ G ++ + + H V SVSW+ S
Sbjct: 67 WSP--CGQYLASASFDATTAIWS-KSSGEFECNATLEGHENEVKSVSWSRS 114
Score = 139 (54.0 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 68/245 (27%), Positives = 104/245 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAWAHPK 67
GHE+ V V+ G LAT S D S+ I V G++ + A L+ H V V W HP
Sbjct: 101 GHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVW-HPT 159
Query: 68 FGSILASCSFDGTVIIW-KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG 126
+LAS S+D T+ ++ +E N+W H S+V ID+ L ++C S D
Sbjct: 160 -KDVLASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERL-VSC-SDDT 216
Query: 127 NISVFTARADGGWDTSRIDQAHPVG--VTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD 184
I ++ A G + V V +VS S A + + C D
Sbjct: 217 TIKIWRAYHPGNTAGVATPEQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACG---D 273
Query: 185 NTVKVWKLYNGIWKMD--CFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVI 238
+ ++++K + K D F + H V V W P + + S S+DG +
Sbjct: 274 DGIRIFKETSDS-KPDEPTFEQITAEEGAHDQDVNSVQWNPVVA---GQLISCSDDGTIK 329
Query: 239 IWTVA 243
IW V+
Sbjct: 330 IWKVS 334
Score = 122 (48.0 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
S G D +++W L W + H +R++ W+P G +ASAS D I
Sbjct: 31 SCGEDKAIRIWSLTGNTWGTKTILS-DGHKRTIREIRWSP-CG---QYLASASFDATTAI 85
Query: 240 WTVAREGDQWE-GKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288
W+ + ++E L + V VSWS +G +LA + +V +WE A
Sbjct: 86 WS--KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVA 133
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 217 (81.4 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 79/296 (26%), Positives = 128/296 (43%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPK 67
GH+ + VA G A+ D +I+I + +T LS GHK + E+ W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGSTWSTKTILSDGHKRTIREIRWS-P- 69
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G LAS SFD T IW + +S E+ + E H++ V S+ W+ GL C S D +
Sbjct: 70 CGQYLASASFDATTAIWSK-SSGEFECNATLEGHENEVKSVSWS-RSGGLLATC-SRDKS 126
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTV 187
+ ++ D ++ + + +H V V W P+ + L S DNT+
Sbjct: 127 VWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTK--------------EVLASASYDNTI 172
Query: 188 KVWKL--YNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245
K++ + W DC L HT + W + + S S+D + IW
Sbjct: 173 KMYAEDPVDNDW--DCTATLTSHTSTI----WGIDFDADGERLVSCSDDTTIKIWKAYHP 226
Query: 246 G--------DQ---WEG--KVLHDFKTPVYRVSW-SLTGNILAVADGNNNVTLWEE 287
G DQ W+ + +Y VSW LTG ++A A G++ + +++E
Sbjct: 227 GNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTG-LIATACGDDGIRIFKE 281
Score = 181 (68.8 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 77/295 (26%), Positives = 128/295 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ GH+ T+ ++ G+ LA+AS D + I + + A L GH+ V V+W+
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS- 112
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
+ G +LA+CS D +V IW+ +E+ V H V + W P + LA S D
Sbjct: 113 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKE--VLASASYD 169
Query: 126 GNISVFTAR-ADGGWDTSRIDQAHPVGVTSVSWAPS-TAPGALVGSGFLDPVQKLCSG-G 182
I ++ D WD + +H TS W A G + S D K+
Sbjct: 170 NTIKMYAEDPVDNDWDCTATLTSH----TSTIWGIDFDADGERLVSCSDDTTIKIWKAYH 225
Query: 183 CDNTVKVWKL-YNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA-SEDG-KVII 239
N+ V +WK C + Q H+ + DV+W GL IA+A +DG ++
Sbjct: 226 PGNSAGVATPDQQTVWKCVCTLSGQ-HSRAIYDVSWCKLTGL----IATACGDDGIRIFK 280
Query: 240 WTVAREGDQWEGKVL------HDFKTPVYRVSWS--LTGNILAVADGNNNVTLWE 286
T + D+ + L HD V V W+ + G +++ +D + + +W+
Sbjct: 281 ETSDSKPDEPTFEQLTAEEGAHD--QDVNSVQWNPVVAGQLISCSD-DGTIKIWK 332
Score = 174 (66.3 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 40/111 (36%), Positives = 59/111 (53%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSID 109
L GHKG +W VAW HPK G++ ASC D + IW S W + D HK ++ I
Sbjct: 10 LQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRIWSLTGST-WSTKTILSDGHKRTIREIR 66
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
W+P G LA S D ++++ ++ G ++ + + H V SVSW+ S
Sbjct: 67 WSP--CGQYLASASFDATTAIWS-KSSGEFECNATLEGHENEVKSVSWSRS 114
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 67/244 (27%), Positives = 101/244 (41%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAWAHPK 67
GHE+ V V+ G LAT S D S+ I V G++ + A L+ H V V W HP
Sbjct: 101 GHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVW-HPT 159
Query: 68 FGSILASCSFDGTVIIWKEGN-SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG 126
+LAS S+D T+ ++ E N+W H S++ ID+ L ++C S D
Sbjct: 160 -KEVLASASYDNTIKMYAEDPVDNDWDCTATLTSHTSTIWGIDFDADGERL-VSC-SDDT 216
Query: 127 NISVFTARADGGWDTSRIDQAHPVG--VTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD 184
I ++ A G V V ++S S A + + C D
Sbjct: 217 TIKIWKAYHPGNSAGVATPDQQTVWKCVCTLSGQHSRAIYDVSWCKLTGLIATACG---D 273
Query: 185 NTVKVWKLYNGIWKMD--CFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVI 238
+ ++++K + K D F L H V V W P + + S S+DG +
Sbjct: 274 DGIRIFKETSDS-KPDEPTFEQLTAEEGAHDQDVNSVQWNPVVA---GQLISCSDDGTIK 329
Query: 239 IWTV 242
IW V
Sbjct: 330 IWKV 333
Score = 124 (48.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
S G D +++W L W + H +R++ W+P G +ASAS D I
Sbjct: 31 SCGEDKAIRIWSLTGSTWSTKTILS-DGHKRTIREIRWSP-CG---QYLASASFDATTAI 85
Query: 240 WTVAREGDQWE-GKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288
W+ + ++E L + V VSWS +G +LA + +V +WE A
Sbjct: 86 WS--KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVA 133
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 216 (81.1 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 86/277 (31%), Positives = 127/277 (45%)
Query: 18 AMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKL--SGHKGAVWEVAWAHPKFGSILASC 75
+ D+ LAT S+D IK++ V + + L + HK A+ VAW P S+LA+
Sbjct: 19 SFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAW-RPHT-SLLAAG 76
Query: 76 SFDGTVIIW-KEGNSNEWIK-D--HVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVF 131
SFD TV IW KE +++ + D + E H++ V + W+ G LA S D ++ ++
Sbjct: 77 SFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND--GYYLATCSRDKSVWIW 134
Query: 132 TARADGG-WDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVW 190
G ++ + Q H V V W PS A L S D+TV++W
Sbjct: 135 ETDESGEEYECISVLQEHSQDVKHVIWHPSEA--------------LLASSSYDDTVRIW 180
Query: 191 KLYNGIWKMDCFPALQMH--TDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAR--EG 246
K Y+ W +C L H T W D + G+ + + S S+D V +W E
Sbjct: 181 KDYDDDW--ECVAVLNGHEGTVWSSD--FDKTEGVFR--LCSGSDDSTVRVWKYMGDDED 234
Query: 247 DQWEG---KVLHDF-KTPVYRVSWSLTGNILAV-ADG 278
DQ E +L D K VY V+W G I +V ADG
Sbjct: 235 DQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADG 271
Score = 195 (73.7 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 85/296 (28%), Positives = 126/296 (42%)
Query: 7 ETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQH-----LAKLSGHKGAVWEV 61
ET H+ + VA + LA S D ++ I + + LA + GH+ V V
Sbjct: 54 ETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGV 113
Query: 62 AWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKD-HVFEDHKSSVNSIDWAPHELGLCLA 120
AW++ G LA+CS D +V IW+ S E + V ++H V + W P E LA
Sbjct: 114 AWSND--GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA--LLA 169
Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
S D + ++ D W+ + H V S + + + V +LCS
Sbjct: 170 SSSYDDTVRIWKDY-DDDWECVAVLNGHEGTVWSSDFDKT------------EGVFRLCS 216
Query: 181 GGCDNTVKVWKLYNGIWKMD-----CFPAL-QMHTDWVRDVAWAPNLGLPKSTIASASED 234
G D+TV+VWK Y G + D C L +H V +VAW N GL IAS D
Sbjct: 217 GSDDSTVRVWK-YMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFN-GL----IASVGAD 270
Query: 235 GKVIIWTVAREGDQWEGKVLHDFKTPVYRVS---W-SLTGN-ILAVADGNNNVTLW 285
G + ++ +G+ W+ VY ++ W L G ILA + V W
Sbjct: 271 GVLAVYEEV-DGE-WKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFW 324
Score = 170 (64.9 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 69/244 (28%), Positives = 105/244 (43%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQH--LAKLSGHKGAVWEVAWAHP 66
GHE+ V VA G LAT S D S+ I + ++ ++ L H V V W HP
Sbjct: 105 GHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW-HP 163
Query: 67 KFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG 126
++LAS S+D TV IWK+ + ++W V H+ +V S D+ E L GS D
Sbjct: 164 S-EALLASSSYDDTVRIWKDYD-DDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS 221
Query: 127 NISVFTARADGGWDTSR------IDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
+ V+ D D + H V +V+W GF + S
Sbjct: 222 TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAW------------GFNGLI---AS 266
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
G D + V++ +G WK+ AL + V W G K+ +A+ +DG V W
Sbjct: 267 VGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNG--KTILATGGDDGIVNFW 324
Query: 241 TVAR 244
++ +
Sbjct: 325 SLEK 328
Score = 145 (56.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 47/174 (27%), Positives = 82/174 (47%)
Query: 119 LACGSSDGNISVFTARADGGWDTSRIDQ-AHPVGVTSVSWAPSTAPGALVGSGFLDPVQK 177
LA GS+D I + + + D +D+ AH + SV+W P T+
Sbjct: 27 LATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTS--------------L 72
Query: 178 LCSGGCDNTVKVW---KLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASED 234
L +G D+TV +W + + ++MD ++ H + V+ VAW+ N G +A+ S D
Sbjct: 73 LAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWS-NDGY---YLATCSRD 128
Query: 235 GKVIIWTVAREGDQWEG-KVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287
V IW G+++E VL + V V W + +LA + ++ V +W++
Sbjct: 129 KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKD 182
Score = 143 (55.4 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 61/235 (25%), Positives = 100/235 (42%)
Query: 60 EVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLC 118
E W+ ILA+ S D + + + + D + E HK ++ S+ W PH
Sbjct: 15 EKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTS--L 72
Query: 119 LACGSSDGNISVFTAR--ADGGW--DTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDP 174
LA GS D +S++ AD + D I + H V V+W+ G+
Sbjct: 73 LAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWS---------NDGYY-- 121
Query: 175 VQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASED 234
CS D +V +W+ + +C LQ H+ V+ V W P+ L +AS+S D
Sbjct: 122 -LATCSR--DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEAL----LASSSYD 174
Query: 235 GKVIIWTVAREGDQWEG-KVLHDFKTPVYRVSWSLTGNILAVADGNNNVTL--WE 286
V IW D WE VL+ + V+ + T + + G+++ T+ W+
Sbjct: 175 DTVRIWK--DYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWK 227
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 216 (81.1 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 87/280 (31%), Positives = 130/280 (46%)
Query: 23 GKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPKFGSILASCSFDGTV 81
G LA+ D I+I G ++ + LS GH+ V +VAW+ P G+ LAS SFD T
Sbjct: 28 GTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWS-P-CGNYLASASFDATT 85
Query: 82 IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDT 141
IWK+ N +++ E H++ V S+ WAP G LA S D ++ V+ + ++
Sbjct: 86 CIWKK-NQDDFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSVWVWEVDEEDEYEC 142
Query: 142 SRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDC 201
+ +H V V W PS + L S D+TVK+++ W C
Sbjct: 143 VSVLNSHTQDVKHVVWHPSQ--------------ELLASASYDDTVKLYQEEGDDWV--C 186
Query: 202 FPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT---------VAREGDQ--WE 250
L+ H V +A+ P+ G +AS S+D V IW VA G W+
Sbjct: 187 CATLEGHESTVWSIAFDPS-G---QRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWK 242
Query: 251 GK-VLHDFKT-PVYRVSW-SLTGNILAVADGNNNVTLWEE 287
L F T +Y V+W LTG LA A G++ + ++EE
Sbjct: 243 CVCTLSGFHTRTIYDVAWCQLTG-ALATACGDDAIRVFEE 281
Score = 180 (68.4 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 75/289 (25%), Positives = 115/289 (39%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ GH+ TV VA G LA+AS D + I + + + L GH+ V VAWA
Sbjct: 56 LSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWA- 114
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP-HELGLCLACGSS 124
P G++LA+CS D +V +W+ +E+ V H V + W P EL LA S
Sbjct: 115 PS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL---LASASY 170
Query: 125 DGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD 184
D + ++ D W + H V S+++ PS A + + G +
Sbjct: 171 DDTVKLYQEEGDD-WVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNE 229
Query: 185 NTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAR 244
V + WK C + HT + DVAW G +A+A D + ++
Sbjct: 230 QGVAC-SGSDPSWKCVCTLS-GFHTRTIYDVAWCQLTG----ALATACGDDAIRVFEEDP 283
Query: 245 EGDQWE---GKVLH---DFKTPVYRVSWS-LTGNILAVADGNNNVTLWE 286
D + H V V+W+ +LA + V WE
Sbjct: 284 GSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEAGLLASCSDDGEVAFWE 332
Score = 132 (51.5 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 37/104 (35%), Positives = 54/104 (51%)
Query: 59 WEVAWAHPKFGSILASCSFDGTVIIW-KEGNSNEWI-KDHVFEDHKSSVNSIDWAPHELG 116
W +AW +P G++LASC D + IW EG+S WI K + E H+ +V + W+P G
Sbjct: 20 WFLAW-NPT-GTLLASCGGDRKIRIWGTEGDS--WICKSVLSEGHQRTVRKVAWSP--CG 73
Query: 117 LCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
LA S D ++ D ++ + H V SV+WAPS
Sbjct: 74 NYLASASFDATTCIWKKNQDD-FECVTTLEGHENEVKSVAWAPS 116
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 215 (80.7 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 87/280 (31%), Positives = 129/280 (46%)
Query: 23 GKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPKFGSILASCSFDGTV 81
G LA+ D I+I G ++ + LS GH+ V +VAW+ P G+ LAS SFD T
Sbjct: 28 GTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWS-P-CGNYLASASFDATT 85
Query: 82 IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDT 141
IWK+ N +++ E H++ V S+ WAP G LA S D ++ V+ + ++
Sbjct: 86 CIWKK-NQDDFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSVWVWEVDEEDEYEC 142
Query: 142 SRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDC 201
+ +H V V W PS + L S D+TVK+++ W C
Sbjct: 143 VSVLSSHTQDVKHVVWHPSQ--------------ELLASASYDDTVKLYQEEGDDWV--C 186
Query: 202 FPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT---------VAREGDQWEGK 252
L+ H V +A+ P+ G +AS S+D V IW VA G K
Sbjct: 187 CATLEGHESTVWSIAFDPS-G---QRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWK 242
Query: 253 ---VLHDFKT-PVYRVSW-SLTGNILAVADGNNNVTLWEE 287
L F T +Y V+W LTG LA A G++ + ++EE
Sbjct: 243 CICTLSGFHTRTIYDVAWCQLTG-ALATACGDDAIRVFEE 281
Score = 178 (67.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 65/236 (27%), Positives = 100/236 (42%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ GH+ TV VA G LA+AS D + I + + + L GH+ V VAWA
Sbjct: 56 LSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWA- 114
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP-HELGLCLACGSS 124
P G++LA+CS D +V +W+ +E+ V H V + W P EL LA S
Sbjct: 115 PS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQEL---LASASY 170
Query: 125 DGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD 184
D + ++ D W + H V S+++ PS A + + G +
Sbjct: 171 DDTVKLYQEEGDD-WVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNE 229
Query: 185 NTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
V + WK C + HT + DVAW G +A+A D + ++
Sbjct: 230 QGVAC-SGSDPSWKCICTLS-GFHTRTIYDVAWCQLTG----ALATACGDDAIRVF 279
Score = 158 (60.7 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 72/247 (29%), Positives = 103/247 (41%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQH-LAKLSGHKGAVWEVAWAHPK 67
GHE+ V VA G LAT S D S+ + V ++ LS H V V W HP
Sbjct: 103 GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVW-HPS 161
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
+LAS S+D TV +++E ++W+ E H+S+V SI + P G LA S D
Sbjct: 162 -QELLASASYDDTVKLYQE-EGDDWVCCATLEGHESTVWSIAFDPS--GQRLASCSDDRT 217
Query: 128 ISVFTARADG--------GWDTS-----RIDQAHPVGVTSVSWAPSTAPGALVGSGFLDP 174
+ ++ G G D S + H + V+W T GAL + D
Sbjct: 218 VRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHTRTIYDVAWCQLT--GALATACGDDA 275
Query: 175 VQKLCSG-GCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASE 233
++ G D + L + Q H+ V VAW P +AS S+
Sbjct: 276 IRVFEEDPGSDPQQPTFSLTAHL--------RQAHSQDVNCVAWNPK---EPGLLASCSD 324
Query: 234 DGKVIIW 240
DG+V W
Sbjct: 325 DGEVAFW 331
Score = 133 (51.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 37/104 (35%), Positives = 54/104 (51%)
Query: 59 WEVAWAHPKFGSILASCSFDGTVIIW-KEGNSNEWI-KDHVFEDHKSSVNSIDWAPHELG 116
W +AW +P G++LASC D + IW EG+S WI K + E H+ +V + W+P G
Sbjct: 20 WFLAW-NPS-GTLLASCGGDRKIRIWGTEGDS--WICKSVLSEGHQRTVRKVAWSP--CG 73
Query: 117 LCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
LA S D ++ D ++ + H V SV+WAPS
Sbjct: 74 NYLASASFDATTCIWKKNQDD-FECVTTLEGHENEVKSVAWAPS 116
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 214 (80.4 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 85/280 (30%), Positives = 129/280 (46%)
Query: 23 GKRLATASSDYSIKIIG-VGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTV 81
G LA+ D S++I G G++ GH+ V +VAW+ P G+ LAS SFD T
Sbjct: 28 GTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWS-P-CGNYLASASFDATT 85
Query: 82 IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDT 141
IWK+ N +++ E H++ V S+ WAP G LA S D ++ V+ + ++
Sbjct: 86 CIWKK-NEDDFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSVWVWEVDEEDEYEC 142
Query: 142 SRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDC 201
+ +H V V W PS + L S D+TVK+++ W C
Sbjct: 143 VSVLNSHTQDVKHVVWHPSQ--------------ELLASASYDDTVKLYREEEDDWV--C 186
Query: 202 FPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT---------VAREGDQWEGK 252
L+ H V +A+ P+ G +AS S+D V IW VA G + K
Sbjct: 187 CATLEGHESTVWSLAFDPS-G---QRLASCSDDRTVRIWRQYLPGNEQGVACSGSEASWK 242
Query: 253 ---VLHDFKT-PVYRVSW-SLTGNILAVADGNNNVTLWEE 287
L F + +Y V+W LTG LA A G++ + ++EE
Sbjct: 243 CVCTLSGFHSRTIYDVAWCQLTGT-LATACGDDAIRVFEE 281
Score = 176 (67.0 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 65/233 (27%), Positives = 99/233 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH+ TV VA G LA+AS D + I + + + L GH+ V VAWA P
Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWA-PS- 116
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP-HELGLCLACGSSDGN 127
G++LA+CS D +V +W+ +E+ V H V + W P EL LA S D
Sbjct: 117 GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL---LASASYDDT 173
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTV 187
+ ++ D W + H V S+++ PS A + + G + V
Sbjct: 174 VKLYREEEDD-WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV 232
Query: 188 KVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
WK C + H+ + DVAW G T+A+A D + ++
Sbjct: 233 AC-SGSEASWKCVCTLS-GFHSRTIYDVAWCQLTG----TLATACGDDAIRVF 279
Score = 155 (59.6 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 65/243 (26%), Positives = 103/243 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQH-LAKLSGHKGAVWEVAWAHPK 67
GHE+ V VA G LAT S D S+ + V ++ L+ H V V W HP
Sbjct: 103 GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW-HPS 161
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
+LAS S+D TV +++E ++W+ E H+S+V S+ + P G LA S D
Sbjct: 162 -QELLASASYDDTVKLYRE-EEDDWVCCATLEGHESTVWSLAFDPS--GQRLASCSDDRT 217
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSW-APSTAPG----ALVGSGFLDPVQKLCSGG 182
+ ++ G +Q + SW T G + + L +
Sbjct: 218 VRIWRQYLPGN------EQGVACSGSEASWKCVCTLSGFHSRTIYDVAWCQLTGTLATAC 271
Query: 183 CDNTVKVWKLYNGIWKMDCFPAL-----QMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
D+ ++V++ G +L Q H+ V VAW P + +AS S+DG++
Sbjct: 272 GDDAIRVFEEDPGSDPQQPTFSLTAHVPQAHSQDVNCVAWNPK---ERGLLASCSDDGEL 328
Query: 238 IIW 240
W
Sbjct: 329 AFW 331
Score = 142 (55.0 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 40/116 (34%), Positives = 62/116 (53%)
Query: 48 LAKLSGHKGA-VWEVAWAHPKFGSILASCSFDGTVIIW-KEGNSNEWI-KDHVFEDHKSS 104
L+++ H + W +AW +P G++LASC D +V IW +EG+S WI K + E H+ +
Sbjct: 8 LSRILAHPDSRCWFLAW-NPA-GTLLASCGGDRSVRIWGREGDS--WICKSVLCEGHQRT 63
Query: 105 VNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
V + W+P G LA S D ++ D ++ + H V SV+WAPS
Sbjct: 64 VRKVAWSP--CGNYLASASFDATTCIWKKNEDD-FECVTTLEGHENEVKSVAWAPS 116
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 213 (80.0 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 68/245 (27%), Positives = 114/245 (46%)
Query: 48 LAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVN 106
L L+GH G VW AW HP G + ASC D T+ +W + +++ W+ V D H ++
Sbjct: 7 LQTLTGHAGRVWSAAW-HPG-GKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIR 64
Query: 107 SIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL 166
+ W+ G LA S D ++V+ ++ G ++ + + H V SV+W+ S G L
Sbjct: 65 ELAWSC--CGHYLASASFDTTVAVWDKKS-GEFECNATLEGHDNEVKSVTWSRS---GNL 118
Query: 167 VGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMD---CFPALQMHTDWVRDVAWAPNLGL 223
+ + CS D +V +W++++ + D C L HT V+ V W P L
Sbjct: 119 LAT---------CSR--DKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQEDL 167
Query: 224 PKSTIASASEDGKVIIWTVA-REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNV 282
S AS ++ +A E + E L + V+ +S+ TG LA + V
Sbjct: 168 LAS--ASYDNTIRMYRQDLADSEWEMLEP--LESHSSTVWSISFDATGQRLASCSEDTTV 223
Query: 283 TLWEE 287
+W++
Sbjct: 224 KVWQQ 228
Score = 200 (75.5 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 79/291 (27%), Positives = 127/291 (43%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH T+ ++A G LA+AS D ++ + + + A L GH V V W+ +
Sbjct: 58 GHTRTIRELAWSCCGHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWS--RS 115
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDH----VFEDHKSSVNSIDWAPHELGLCLACGSS 124
G++LA+CS D +V IW+ ++ + ++ V H V + W P E L LA S
Sbjct: 116 GNLLATCSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQE-DL-LASASY 173
Query: 125 DGNISVFTAR-ADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSG-G 182
D I ++ AD W+ ++H V S+S+ A G + S D K+ G
Sbjct: 174 DNTIRMYRQDLADSEWEMLEPLESHSSTVWSISF---DATGQRLASCSEDTTVKVWQQYG 230
Query: 183 CDNTVKVWKLYNG-IWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT 241
DN + + G IWK C + H+ V D+ W GL +A+A D V I+
Sbjct: 231 PDNALGIPCPDRGTIWKCVCTLS-GYHSRSVYDIDWCKQTGL----LATACGDDTVRIFR 285
Query: 242 VAREGDQWEGK-----VLHDFKTPVYRVSWSLT-GNILAVADGNNNVTLWE 286
A + D+ E + +V+W T +L A + + LW+
Sbjct: 286 EASDSDRNEPTFELVVTVEAHSQDANKVAWHPTVPGLLLTASDDGEIKLWQ 336
Score = 176 (67.0 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 76/303 (25%), Positives = 125/303 (41%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKL---SGHKGAVWEVAWA 64
TGH V A GK A+ D +I++ ++T + +A+ GH + E+AW+
Sbjct: 11 TGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNK-SDTDRWVAQTVLTDGHTRTIRELAWS 69
Query: 65 HPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSS 124
G LAS SFD TV +W + S E+ + E H + V S+ W+ G LA S
Sbjct: 70 C--CGHYLASASFDTTVAVWDK-KSGEFECNATLEGHDNEVKSVTWS--RSGNLLATCSR 124
Query: 125 DGNISVFTAR----ADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
D ++ ++ + ++ + H V V W P L S
Sbjct: 125 DKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQE--------------DLLAS 170
Query: 181 GGCDNTVKVWK--LYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVI 238
DNT+++++ L + W+M L+ H+ V W+ + +AS SED V
Sbjct: 171 ASYDNTIRMYRQDLADSEWEM--LEPLESHSSTV----WSISFDATGQRLASCSEDTTVK 224
Query: 239 IWT-----------VAREGDQWEGK-VLHDFKT-PVYRVSWSLTGNILAVADGNNNVTLW 285
+W G W+ L + + VY + W +LA A G++ V ++
Sbjct: 225 VWQQYGPDNALGIPCPDRGTIWKCVCTLSGYHSRSVYDIDWCKQTGLLATACGDDTVRIF 284
Query: 286 EEA 288
EA
Sbjct: 285 REA 287
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 205 (77.2 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 84/280 (30%), Positives = 129/280 (46%)
Query: 23 GKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPKFGSILASCSFDGTV 81
G LA+ D I+I G ++ + LS GH+ V +VAW+ P G+ LAS SFD T
Sbjct: 28 GTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWS-P-CGNYLASASFDATT 85
Query: 82 IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDT 141
IWK+ N +++ E H++ V S+ WAP G LA S D ++ V+ + ++
Sbjct: 86 CIWKK-NQDDFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSVWVWEVDEEDEYEC 142
Query: 142 SRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDC 201
+ +H V V W PS + L S D+TVK+++ W C
Sbjct: 143 VSVLNSHTQDVKHVVWHPSQ--------------ELLASASYDDTVKLYREEEDDWV--C 186
Query: 202 FPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT---------VAREGDQWEGK 252
L+ H V +A+ P+ G +AS S+D V IW VA G K
Sbjct: 187 CATLEGHESTVWSLAFDPS-G---QRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWK 242
Query: 253 ---VLHDFKT-PVYRVSW-SLTGNILAVADGNNNVTLWEE 287
L F + +Y ++W LTG LA A G++ + +++E
Sbjct: 243 CICTLSGFHSRTIYDIAWCQLTG-ALATACGDDAIRVFQE 281
Score = 173 (66.0 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 73/289 (25%), Positives = 117/289 (40%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ GH+ TV VA G LA+AS D + I + + + L GH+ V VAWA
Sbjct: 56 LSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWA- 114
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP-HELGLCLACGSS 124
P G++LA+CS D +V +W+ +E+ V H V + W P EL LA S
Sbjct: 115 PS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL---LASASY 170
Query: 125 DGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD 184
D + ++ D W + H V S+++ PS A + + G +
Sbjct: 171 DDTVKLYREEEDD-WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNE 229
Query: 185 NTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAR 244
V + WK C + H+ + D+AW G +A+A D + ++
Sbjct: 230 QGVAC-SGSDPSWKCICTLS-GFHSRTIYDIAWCQLTG----ALATACGDDAIRVFQEDP 283
Query: 245 EGDQWEGKV-----LHDFKTP-VYRVSWS-LTGNILAVADGNNNVTLWE 286
D + LH + V V+W+ +LA + V W+
Sbjct: 284 NSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWK 332
Score = 157 (60.3 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 67/247 (27%), Positives = 104/247 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQH-LAKLSGHKGAVWEVAWAHPK 67
GHE+ V VA G LAT S D S+ + V ++ L+ H V V W HP
Sbjct: 103 GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW-HPS 161
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
+LAS S+D TV +++E ++W+ E H+S+V S+ + P G LA S D
Sbjct: 162 -QELLASASYDDTVKLYRE-EEDDWVCCATLEGHESTVWSLAFDPS--GQRLASCSDDRT 217
Query: 128 ISVFTARADGGWDTSRIDQAHPVG--VTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDN 185
+ ++ G + P + ++S S + + C D+
Sbjct: 218 VRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACG---DD 274
Query: 186 TVKVWKLY-NGIWKMDCFPAL----QMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
++V++ N + F Q H+ V VAW P +AS S+DG+V W
Sbjct: 275 AIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPK---EPGLLASCSDDGEVAFW 331
Query: 241 TVAR-EG 246
R EG
Sbjct: 332 KYQRPEG 338
Score = 135 (52.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 48 LAKLSGHKGA-VWEVAWAHPKFGSILASCSFDGTVIIW-KEGNSNEWI-KDHVFEDHKSS 104
L ++ H + W +AW +P G++LASC D + IW EG+S WI K + E H+ +
Sbjct: 8 LGRVPAHPDSRCWFLAW-NPA-GTLLASCGGDRRIRIWGTEGDS--WICKSVLSEGHQRT 63
Query: 105 VNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
V + W+P G LA S D ++ D ++ + H V SV+WAPS
Sbjct: 64 VRKVAWSP--CGNYLASASFDATTCIWKKNQDD-FECVTTLEGHENEVKSVAWAPS 116
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 204 (76.9 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 73/281 (25%), Positives = 118/281 (41%)
Query: 12 DTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAW-AHPKFGS 70
D V ++A G+ LAT ++D I+I N L + +G V A G
Sbjct: 25 DKVWNLAWHPNGEILATCANDKYIQIWSKDTNGKWGLVQ--SLEGHEKTVRRVAWSPCGR 82
Query: 71 ILASCSFDGTVIIWKEGNSNEWIKDHV--FEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
LA SFD + IW E + +E HV E H V S+ W G LA S D +I
Sbjct: 83 FLAGASFDASTSIW-EKSKDELEFTHVSSLEGHTYEVKSVAW--DSTGTLLATCSRDKSI 139
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVK 188
++ D ++ I+ H + V W P+ + L S D+T+K
Sbjct: 140 WIWQMEDDNDFECLSINSGHGQDIKCVLWHPNE--------------ELLASSSYDDTIK 185
Query: 189 VWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQ 248
WK +G W +C L H + D+A+ + G + S ED V+ W +E ++
Sbjct: 186 FWKDIDGDW--ECINTLTGHESSIWDLAFNKD-G---DKLVSCGEDKLVLFWKFDKENEK 239
Query: 249 WEG--KVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287
W K ++ P+Y + WS N + ++++ +E+
Sbjct: 240 WINIFKFKNENSRPIYSIDWSSLTNTIVTGSADDSIIFYEQ 280
Score = 159 (61.0 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 47/139 (33%), Positives = 67/139 (48%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQ--HLAKLSGHKGAVWEV 61
Q +E GHE TV VA G+ LA AS D S I + + H++ L GH V V
Sbjct: 63 QSLE-GHEKTVRRVAWSPCGRFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSV 121
Query: 62 AWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLAC 121
AW G++LA+CS D ++ IW+ + N++ + H + + W P+E LA
Sbjct: 122 AW--DSTGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNEE--LLAS 177
Query: 122 GSSDGNISVFTARADGGWD 140
S D I F DG W+
Sbjct: 178 SSYDDTIK-FWKDIDGDWE 195
Score = 154 (59.3 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 55/193 (28%), Positives = 86/193 (44%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
I +GH + V + LA++S D +IK + + + L+GH+ ++W++A+
Sbjct: 155 INSGHGQDIKCVLWHPNEELLASSSYDDTIKFWKDIDGDWECINTLTGHESSIWDLAFN- 213
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNE-WIKDHVFEDHKSS-VNSIDWAPHELGLCLACGS 123
K G L SC D V+ WK NE WI F++ S + SIDW+ L + GS
Sbjct: 214 -KDGDKLVSCGEDKLVLFWKFDKENEKWINIFKFKNENSRPIYSIDWS--SLTNTIVTGS 270
Query: 124 SDGNISVFTARADGGWDTSRI----DQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLC 179
+D +I + +D D +I AH V W P F + L
Sbjct: 271 ADDSIIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPK----------FKNI---LA 317
Query: 180 SGGCDNTVKVWKL 192
S G D +K+W+L
Sbjct: 318 SCGDDGFIKIWEL 330
Score = 115 (45.5 bits), Expect = 0.00034, P = 0.00034
Identities = 59/236 (25%), Positives = 98/236 (41%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH V VA D G LAT S D SI I + ++ ++ G + HP
Sbjct: 113 GHTYEVKSVAWDSTGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPN- 171
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELG-LCLACGSSDGN 127
+LAS S+D T+ WK+ + +W + H+SS+ D A ++ G ++CG +
Sbjct: 172 EELLASSSYDDTIKFWKDIDG-DWECINTLTGHESSI--WDLAFNKDGDKLVSCG--EDK 226
Query: 128 ISVFTA--RADGGW-DTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD 184
+ +F + + W + + + + S+ W+ T +V +G D D
Sbjct: 227 LVLFWKFDKENEKWINIFKFKNENSRPIYSIDWSSLT--NTIV-TGSADDSIIFYEQESD 283
Query: 185 NTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
+T +K+ I K H V W P K+ +AS +DG + IW
Sbjct: 284 DTPDKYKI---ILKKK-----NAHDSDVNCTKWNPKF---KNILASCGDDGFIKIW 328
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 202 (76.2 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 83/277 (29%), Positives = 125/277 (45%)
Query: 23 GKRLATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTV 81
G LA+ D +I+I G G+N GH+ V +V+W+ P G+ LAS SFD T
Sbjct: 28 GTLLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQRTVRKVSWS-P-CGNYLASASFDATT 85
Query: 82 IIW-KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWD 140
IW K+ E I E H++ V S+ WAP G LA S D ++ V+ + ++
Sbjct: 86 CIWMKKKEEFECIT--TLEGHENEVKSVAWAPS--GSLLATCSRDKSVWVWEVDEEEEYE 141
Query: 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMD 200
+ +H V V W P+ + L S D++VK+++ W
Sbjct: 142 CVSVLNSHTQDVKHVVWHPNQ--------------ELLASASYDDSVKLYREEEDDWV-- 185
Query: 201 CFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQ-------WEGK- 252
C L+ HT V W+ +A+ S+D V IW G+Q W+
Sbjct: 186 CCATLEGHTSTV----WSLAFDQTGEQLATCSDDKTVRIWRQLGTGEQGSKSDPNWKCVC 241
Query: 253 VLHDFKT-PVYRVSWS-LTGNILAVADGNNNVTLWEE 287
L + T VY V+W+ LTG I A A G++ V ++EE
Sbjct: 242 TLTGYHTRTVYDVNWNHLTGAI-ATACGDDAVRIFEE 277
Score = 156 (60.0 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 45/149 (30%), Positives = 69/149 (46%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH+ TV V+ G LA+AS D + I + + L GH+ V VAWA P
Sbjct: 59 GHQRTVRKVSWSPCGNYLASASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWA-PS- 116
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
GS+LA+CS D +V +W+ E+ V H V + W P++ LA S D ++
Sbjct: 117 GSLLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHPNQE--LLASASYDDSV 174
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSW 157
++ D W + H V S+++
Sbjct: 175 KLYREEEDD-WVCCATLEGHTSTVWSLAF 202
Score = 146 (56.5 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 67/243 (27%), Positives = 104/243 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQH-LAKLSGHKGAVWEVAWAHPK 67
GHE+ V VA G LAT S D S+ + V ++ L+ H V V W HP
Sbjct: 103 GHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVW-HPN 161
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
+LAS S+D +V +++E ++W+ E H S+V S+ A + G LA S D
Sbjct: 162 -QELLASASYDDSVKLYRE-EEDDWVCCATLEGHTSTVWSL--AFDQTGEQLATCSDDKT 217
Query: 128 ISVFT--------ARADGGWD-TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
+ ++ +++D W + H V V+W T GA+ + D V+
Sbjct: 218 VRIWRQLGTGEQGSKSDPNWKCVCTLTGYHTRTVYDVNWNHLT--GAIATACGDDAVRIF 275
Query: 179 CSG-GCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
G D + L + P + HT V V W P + +AS S+DG++
Sbjct: 276 EEDPGSDPLQPTFSLTAHM------P--RAHTQDVNCVTWHPK---EPNLLASCSDDGEM 324
Query: 238 IIW 240
W
Sbjct: 325 AFW 327
Score = 145 (56.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 37/115 (32%), Positives = 61/115 (53%)
Query: 48 LAKLSGHKGA-VWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWI-KDHVFEDHKSSV 105
L+++S H + W +AW +P G++LASC D T+ IW + N W+ K + E H+ +V
Sbjct: 8 LSRVSAHPDSRCWFLAW-NPS-GTLLASCGGDRTIRIWGKDGDN-WVCKSVLGEGHQRTV 64
Query: 106 NSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
+ W+P G LA S D ++ + + ++ + H V SV+WAPS
Sbjct: 65 RKVSWSP--CGNYLASASFDATTCIWMKKKEE-FECITTLEGHENEVKSVAWAPS 116
>UNIPROTKB|F1SU35 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097361 "CIA complex" evidence=IEA] [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0071817 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:CU896688
Ensembl:ENSSSCT00000008907 Uniprot:F1SU35
Length = 337
Score = 202 (76.2 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 86/281 (30%), Positives = 128/281 (45%)
Query: 23 GKRLATASSDYSIKIIG-VGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTV 81
G LA+ D S++I G G++ GH+ V +VAW+ P G+ LAS SFD T
Sbjct: 28 GTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWS-P-CGNYLASASFDATT 85
Query: 82 IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGG-WD 140
IWK+ N +++ E H++ V S+ WAP G LA S D ++ V+ + D
Sbjct: 86 CIWKK-NKDDFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSVWVWEGTVENQPSD 142
Query: 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMD 200
+R+ P + V W PS + L S D+TVK+++ W
Sbjct: 143 PTRVPYK-PQSMKKVLWHPSQ--------------ELLASASYDDTVKLYREEEDDWV-- 185
Query: 201 CFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT---------VAREGDQWEG 251
C L+ H V +A+ P+ G +AS S+D V IW VA G
Sbjct: 186 CCATLEGHESTVWSLAFDPS-G---QRLASCSDDRTVRIWRQYLPGNEQGVACNGSDPSW 241
Query: 252 K---VLHDFKT-PVYRVSW-SLTGNILAVADGNNNVTLWEE 287
K L F + +Y V+W LTG LA A G++ + ++EE
Sbjct: 242 KCICTLSGFHSRTIYDVAWCQLTG-ALATACGDDAIRVFEE 281
Score = 155 (59.6 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH+ TV VA G LA+AS D + I + + + L GH+ V VAWA P
Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNKDDFECVTTLEGHENEVKSVAWA-PS- 116
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHK-SSVNSIDWAP-HELGLCLACGSSDG 126
G++LA+CS D +V +W EG D +K S+ + W P EL LA S D
Sbjct: 117 GNLLATCSRDKSVWVW-EGTVENQPSDPTRVPYKPQSMKKVLWHPSQEL---LASASYDD 172
Query: 127 NISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNT 186
+ ++ D W + H V S+++ PS A + + G +
Sbjct: 173 TVKLYREEEDD-WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQG 231
Query: 187 VKVWKLYNGI---WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
V NG WK C + H+ + DVAW G +A+A D + ++
Sbjct: 232 VAC----NGSDPSWKCICTLS-GFHSRTIYDVAWCQLTG----ALATACGDDAIRVF 279
Score = 144 (55.7 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 68/247 (27%), Positives = 105/247 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKII-GVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
GHE+ V VA G LAT S D S+ + G N ++ ++ +V W HP
Sbjct: 103 GHENEVKSVAWAPSGNLLATCSRDKSVWVWEGTVENQPSDPTRVPYKPQSMKKVLW-HPS 161
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
+LAS S+D TV +++E ++W+ E H+S+V S+ + P G LA S D
Sbjct: 162 -QELLASASYDDTVKLYRE-EEDDWVCCATLEGHESTVWSLAFDPS--GQRLASCSDDRT 217
Query: 128 ISVFTARADG--------GWDTS-----RIDQAHPVGVTSVSWAPSTAPGALVGSGFLDP 174
+ ++ G G D S + H + V+W T GAL + D
Sbjct: 218 VRIWRQYLPGNEQGVACNGSDPSWKCICTLSGFHSRTIYDVAWCQLT--GALATACGDDA 275
Query: 175 VQKLCSG-GCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASE 233
++ G D + L + P Q H+ V VAW P + +AS S+
Sbjct: 276 IRVFEEDPGSDPQQPTFSLTAHL------P--QAHSQDVNCVAWNPK---EQGLLASCSD 324
Query: 234 DGKVIIW 240
DG++ W
Sbjct: 325 DGELAFW 331
Score = 142 (55.0 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 40/116 (34%), Positives = 61/116 (52%)
Query: 48 LAKLSGHKGA-VWEVAWAHPKFGSILASCSFDGTVIIW-KEGNSNEWI-KDHVFEDHKSS 104
L ++ H + W +AW +P G++LASC D +V IW +EG+S WI K + E H+ +
Sbjct: 8 LGRIPAHPDSRCWFLAW-NPA-GTLLASCGGDRSVRIWGREGDS--WICKSVLCEGHQRT 63
Query: 105 VNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
V + W+P G LA S D ++ D ++ + H V SV+WAPS
Sbjct: 64 VRKVAWSP--CGNYLASASFDATTCIWKKNKDD-FECVTTLEGHENEVKSVAWAPS 116
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 186 (70.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 78/289 (26%), Positives = 116/289 (40%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ GH+ TV VA GK LA+AS D + I + + L L GH+ V VAWA
Sbjct: 56 LSDGHQRTVRKVAWSPCGKYLASASFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWA- 114
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP-HELGLCLACGSS 124
P GS+LA+CS D +V IW+ +E+ V H V + W P EL LA S
Sbjct: 115 PS-GSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQEL---LASASY 170
Query: 125 DGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD 184
D I ++ D W+ + H V S+++ P A + K + G
Sbjct: 171 DNKICIYKEE-DDDWECRATLEGHESTVWSLTFDPEGRRLASCSDDRTVKIWKESTTGDG 229
Query: 185 NTVKVWKLYNGIWKMDCFPALQ-MHTDWVRDVAWAPNLGLPKSTIASASEDG-KVIIWTV 242
++ + WK C L H + D+AW G + + +DG +V
Sbjct: 230 SSDESWK---------CICTLSGFHGRTIYDIAWCRLTG---ALATACGDDGVRVFSEDP 277
Query: 243 AREGDQ----WEGKVLHDFKTPVYRVSWS-LTGNILAVADGNNNVTLWE 286
+ +Q V V VSW+ +LA N +W+
Sbjct: 278 TADPEQPIFALSAHVPKAHNQDVNCVSWNPKEAGLLATCSDNGEFAIWK 326
Score = 165 (63.1 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 53/165 (32%), Positives = 81/165 (49%)
Query: 17 VAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPKFGSILASC 75
VA + G LAT D +I+I G ++ + LS GH+ V +VAW+ P G LAS
Sbjct: 22 VAWNPAGTTLATCGGDRAIRIWGKEGDSWECKCVLSDGHQRTVRKVAWS-P-CGKYLASA 79
Query: 76 SFDGTVIIWKEGNSN-EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTAR 134
SFD T IWK+ + + E + V E H++ V + WAP G LA S D ++ ++
Sbjct: 80 SFDATTCIWKKTDEDFECLT--VLEGHENEVKCVAWAPS--GSLLATCSRDKSVWIWEVD 135
Query: 135 ADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLC 179
+ ++ + +H V V W P+ L+ S D K+C
Sbjct: 136 EEDEYECLSVVNSHTQDVKHVVWHPTQE---LLASASYD--NKIC 175
Score = 164 (62.8 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 63/227 (27%), Positives = 99/227 (43%)
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G LAS SFD T IWK+ ++ V E H++ V + WAP G LA S D ++
Sbjct: 73 GKYLASASFDATTCIWKK-TDEDFECLTVLEGHENEVKCVAWAPS--GSLLATCSRDKSV 129
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVK 188
++ + ++ + +H V V W P+ + L S DN +
Sbjct: 130 WIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQ--------------ELLASASYDNKIC 175
Query: 189 VWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGD- 247
++K + W +C L+ H V + + P G +AS S+D V IW + GD
Sbjct: 176 IYKEEDDDW--ECRATLEGHESTVWSLTFDPE-G---RRLASCSDDRTVKIWKESTTGDG 229
Query: 248 ----QWEGK-VLHDFK-TPVYRVSWS-LTGNILAVADGNNNVTLWEE 287
W+ L F +Y ++W LTG LA A G++ V ++ E
Sbjct: 230 SSDESWKCICTLSGFHGRTIYDIAWCRLTG-ALATACGDDGVRVFSE 275
Score = 136 (52.9 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 40/118 (33%), Positives = 60/118 (50%)
Query: 46 QHLAKLSGHKGA-VWEVAWAHPKFGSILASCSFDGTVIIW-KEGNSNEWIKDHVFED-HK 102
QH ++S H + W VAW +P G+ LA+C D + IW KEG+S W V D H+
Sbjct: 8 QH--RVSAHPDSRCWYVAW-NPA-GTTLATCGGDRAIRIWGKEGDS--WECKCVLSDGHQ 61
Query: 103 SSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
+V + W+P G LA S D ++ + D ++ + + H V V+WAPS
Sbjct: 62 RTVRKVAWSP--CGKYLASASFDATTCIWK-KTDEDFECLTVLEGHENEVKCVAWAPS 116
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 33/109 (30%), Positives = 51/109 (46%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
L + G D +++W W+ C + H VR VAW+P G +ASAS D
Sbjct: 31 LATCGGDRAIRIWGKEGDSWECKCVLS-DGHQRTVRKVAWSP-CG---KYLASASFDATT 85
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
IW E + VL + V V+W+ +G++LA + +V +WE
Sbjct: 86 CIWKKTDEDFECL-TVLEGHENEVKCVAWAPSGSLLATCSRDKSVWIWE 133
Score = 114 (45.2 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 184 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D +V +W++ + +C + HT V+ V W P L +ASAS D K+ I+
Sbjct: 126 DKSVWIWEVDEED-EYECLSVVNSHTQDVKHVVWHPTQEL----LASASYDNKICIYK-- 178
Query: 244 REGDQWEGKV-LHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288
E D WE + L ++ V+ +++ G LA + V +W+E+
Sbjct: 179 EEDDDWECRATLEGHESTVWSLTFDPEGRRLASCSDDRTVKIWKES 224
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 207 (77.9 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 90/310 (29%), Positives = 138/310 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH + V V + + LA+AS D ++KI T Q + K GH +V V ++H
Sbjct: 303 GHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLK--GHNDSVRSVVFSHDS- 359
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
++AS S D TV IW+ + + H FEDH+ SV ++ +A H+ LA S GN+
Sbjct: 360 -RLIASGSNDRTVRIWE---TTTGLLRHTFEDHEDSVMAVSFA-HD-SRRLASASDGGNV 413
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPST-----------------APGALVGS-- 169
++ R + + H V SVS++P + A G+L +
Sbjct: 414 KIWDTRTGS---LQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLE 470
Query: 170 GFLDPVQK---------LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPN 220
G D V+ + S D TVK+W + + L+ H +WVR V ++ +
Sbjct: 471 GHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNN----LESHDNWVRSVVFSHD 526
Query: 221 LGLPKSTIASASEDGKVIIWTVAREG--DQWEGKVLHDFKTPVYRVSWSLTGNILAVADG 278
L +ASAS+D V IW A + EG HD + V VS+S +LA A
Sbjct: 527 SRL----LASASDDMTVKIWDTATGSLENTLEG---HDDR--VNSVSFSPDSRLLASASD 577
Query: 279 NNNVTLWEEA 288
+ V +W A
Sbjct: 578 DGTVKIWYAA 587
Score = 185 (70.2 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 89/308 (28%), Positives = 128/308 (41%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH+ V V+ + + LA+AS D ++KI + Q+ L GH V V ++H
Sbjct: 261 GHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNT--LEGHNEWVKSVVFSHDS- 317
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
+LAS S DGTV IW + + H SV S+ ++ H+ L +A GS+D +
Sbjct: 318 -RLLASASDDGTVKIWDTATGT---LQRMLKGHNDSVRSVVFS-HDSRL-IASGSNDRTV 371
Query: 129 SV-----------FTARADG------GWDTSRIDQAHPVGVTSVSWAPSTAPGAL----- 166
+ F D D+ R+ A G + W T G+L
Sbjct: 372 RIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKI-W--DTRTGSLQNVLE 428
Query: 167 -----VGSGFLDPVQKL-CSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPN 220
V S P +L S D TVK+W G + L+ H DWVR V ++ +
Sbjct: 429 GHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQR----TLEGHNDWVRSVVFSHD 484
Query: 221 LGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNN 280
L IASAS+D V IW A Q HD V V +S +LA A +
Sbjct: 485 SRL----IASASDDMTVKIWDTATVPLQ-NNLESHD--NWVRSVVFSHDSRLLASASDDM 537
Query: 281 NVTLWEEA 288
V +W+ A
Sbjct: 538 TVKIWDTA 545
Score = 181 (68.8 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 82/311 (26%), Positives = 127/311 (40%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAW 63
Q++ GH D+V V + + +A+ S+D +++I +H H+ +V V++
Sbjct: 340 QRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHT--FEDHEDSVMAVSF 397
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
AH LAS S G V IW + +V E H VNS+ ++P LA S
Sbjct: 398 AHDS--RRLASASDGGNVKIWDTRTGS---LQNVLEGHDDCVNSVSFSPDSR--LLASAS 450
Query: 124 SDGNISVF---------TARADGGW-------DTSRIDQAHPVGVTSVSWAPSTAP--GA 165
D + ++ T W SR+ + +T W +T P
Sbjct: 451 DDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNN 510
Query: 166 LVGSG-------FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWA 218
L F + L S D TVK+W G + L+ H D V V+++
Sbjct: 511 LESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLEN----TLEGHDDRVNSVSFS 566
Query: 219 PNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTP---VYRVSWSLTGNILAV 275
P+ L +ASAS+DG V IW A G V H F +++S T N+LA
Sbjct: 567 PDSRL----LASASDDGTVKIWYAAT------GTVQHTFDGSGRVAISLAFSHTSNLLAS 616
Query: 276 ADGNNNVTLWE 286
A + V +W+
Sbjct: 617 AMDDGTVKIWD 627
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 134 (52.2 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 45/133 (33%), Positives = 64/133 (48%)
Query: 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVA 62
P + +GHE V+ G LA++ D I + V + + A L GH GAV E+
Sbjct: 48 PIMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENY-ATLKGHSGAVMELH 106
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLAC- 121
+ GS+L S S D TV +W + + E +K + H S VNS P G LAC
Sbjct: 107 YNTD--GSLLFSASTDKTVCVW-DSETGERVKR--LKGHTSFVNSC--FPARRGPQLACT 159
Query: 122 GSSDGNISVFTAR 134
GS DG + ++ R
Sbjct: 160 GSDDGTVKLWDIR 172
Score = 111 (44.1 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 35/122 (28%), Positives = 57/122 (46%)
Query: 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
F D ++ SGG DN +KVW L K+ ++Q H D V ++ L S + S
Sbjct: 191 FNDTSDQIISGGIDNDIKVWDLRQN--KL--IYSMQGHGDSVTGLS----LSADGSYLLS 242
Query: 231 ASEDGKVIIWTVAREGDQ------WEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTL 284
S D V +W + + ++G V H+F+ + R SWS G+ +A + V +
Sbjct: 243 NSMDNSVRVWDIRPFAPKERCVKIFQGNV-HNFEKNLLRCSWSADGSKIAAGSADRFVYI 301
Query: 285 WE 286
W+
Sbjct: 302 WD 303
Score = 50 (22.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 28/114 (24%), Positives = 45/114 (39%)
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG 235
Q C+G D TVK+W I K Q +T V V + I S D
Sbjct: 155 QLACTGSDDGTVKLWD----IRKKASVHTFQ-NTYQVLSVTFNDT----SDQIISGGIDN 205
Query: 236 KVIIWTVAREGDQWEGKVLHDFK---TPVYRVSWSLTGNILAVADGNNNVTLWE 286
+ +W D + K+++ + V +S S G+ L +N+V +W+
Sbjct: 206 DIKVW------DLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWD 253
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 197 (74.4 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 71/238 (29%), Positives = 108/238 (45%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D+V DVA D GK LA+ S+D SIK+ + + + + GH V VA+ P
Sbjct: 148 GHTDSVQDVAFDAQGKLLASCSADLSIKLWDF-QQSYECIKTMHGHDHNVSSVAFV-PA- 204
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G + S S D T+ +W E + +K + H+ V + H G A S+D I
Sbjct: 205 GDYVLSASRDRTIKMW-EVATGYCVK--TYTGHREWVRMV--RVHIEGSIFATCSNDQTI 259
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK------LCSGG 182
V+ + R D H V ++WAP A A+ + D + L SG
Sbjct: 260 RVWLTNSKDCKVELR-DHEHTV--ECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGS 316
Query: 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
D T+++W + G+ C L H +WVR +A+ P G + SAS+D + +W
Sbjct: 317 RDKTIRIWDVSVGL----CLLTLSGHDNWVRGLAFHPG-G---KYLVSASDDKTIRVW 366
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 72/259 (27%), Positives = 105/259 (40%)
Query: 2 PPQKIE-TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
PP+K TGH ++ V + +AS D +I+I T ++ L GH +V +
Sbjct: 98 PPEKFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDF--ETGEYERSLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA 120
VA+ G +LASCS D ++ +W S E IK DH +V+S+ + P G +
Sbjct: 156 VAFDAQ--GKLLASCSADLSIKLWDFQQSYECIKTMHGHDH--NVSSVAFVP--AGDYVL 209
Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
S D I ++ A G + V + V + GS F CS
Sbjct: 210 SASRDRTIKMWEV-ATGYCVKTYTGHREWVRMVRVH---------IEGSIFAT-----CS 254
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL---------GLPKST---- 227
D T++VW L N DC L+ H V +AWAP G
Sbjct: 255 N--DQTIRVW-LTNS---KDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQ 308
Query: 228 ---IASASEDGKVIIWTVA 243
+AS S D + IW V+
Sbjct: 309 GPFLASGSRDKTIRIWDVS 327
Score = 125 (49.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH+ V VA G + +AS D +IK+ V T + +GH+ V V H +
Sbjct: 191 GHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVA--TGYCVKTYTGHREWVRMVR-VHIE- 246
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCL--ACGSSD- 125
GSI A+CS D T+ +W NS + + DH+ +V I WAP + A G+ +
Sbjct: 247 GSIFATCSNDQTIRVWLT-NSKDCKVE--LRDHEHTVECIAWAPEAAASAINEAAGADNK 303
Query: 126 -GNISVFTARADGGWD-TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGC 183
G+ A G D T RI VG+ ++ S + G F + L S
Sbjct: 304 KGHHQG-PFLASGSRDKTIRIWDVS-VGLCLLTL--SGHDNWVRGLAFHPGGKYLVSASD 359
Query: 184 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
D T++VW L N C L H + + + + P + S S D V +W
Sbjct: 360 DKTIRVWDLRN----KRCMKTLYAHQHFCTSIDF--HKAHPY--VISGSVDQTVKVW 408
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 193 (73.0 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 81/303 (26%), Positives = 131/303 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ GH+ T+ +V G+ LA+AS D + I T A L GH+ V V+W+
Sbjct: 54 LSDGHKRTIREVRWSPCGEYLASASFDATTAIWSKHECT----ATLEGHENEVKSVSWS- 108
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
+ G +LA+CS D +V IW+ +E+ V H V + W P + LA S D
Sbjct: 109 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKE--VLASASYD 165
Query: 126 GNISVFTARA-DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD 184
I +F A D WD + +H V S+ + A G ++L S D
Sbjct: 166 NTIKMFAESALDSDWDCTATLSSHTSTVWSIDF---DADG-----------ERLVSCSDD 211
Query: 185 NTVKVWKLYN-----GI--------WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA 231
T+K+W+ Y+ GI WK C + + H+ + DV+W GL IASA
Sbjct: 212 ATLKIWRAYHPGNDAGIATPDKTTVWKCVCTLSGE-HSRAIYDVSWCKQTGL----IASA 266
Query: 232 SEDGKVIIWTVA----REGDQWEGKVLHD--FKTPVYRVSWS--LTGNILAVADGNNNVT 283
D + I+ R+ +E + + V V W+ G +++ +D + +
Sbjct: 267 CGDDGIRIFKECSDSKRDAPTFELLTAEESAHEQDVNAVEWNPVTAGQLISCSD-DGTIK 325
Query: 284 LWE 286
+W+
Sbjct: 326 IWK 328
Score = 178 (67.7 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 72/288 (25%), Positives = 119/288 (41%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPK 67
GH+ + VA G A+ D +I+I + NT LS GHK + EV W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWS-P- 69
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G LAS SFD T IW + + E H++ V S+ W+ GL C S D +
Sbjct: 70 CGEYLASASFDATTAIWSKHECTATL-----EGHENEVKSVSWS-RSGGLLATC-SRDKS 122
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDN-- 185
+ ++ D ++ + + AH V V W P+ L + + + ++ D+
Sbjct: 123 VWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKE--VLASASYDNTIKMFAESALDSDW 180
Query: 186 --TVKVWKLYNGIWKMDCFPA----LQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
T + + +W +D F A L +D W P + A+ D K +
Sbjct: 181 DCTATLSSHTSTVWSID-FDADGERLVSCSDDATLKIWRAYH--PGNDAGIATPD-KTTV 236
Query: 240 WTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287
W G+ H +Y VSW ++A A G++ + +++E
Sbjct: 237 WKCVCT---LSGE--HS--RAIYDVSWCKQTGLIASACGDDGIRIFKE 277
Score = 155 (59.6 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 39/111 (35%), Positives = 56/111 (50%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSID 109
L GHKG +W VAW HPK G+ ASC D + IW + N W + D HK ++ +
Sbjct: 10 LQGHKGRIWGVAW-HPK-GNSFASCGEDKAIRIWSL-SGNTWTTKTILSDGHKRTIREVR 66
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
W+P G LA S D ++++ T+ ++ H V SVSW+ S
Sbjct: 67 WSP--CGEYLASASFDATTAIWSKHEC----TATLE-GHENEVKSVSWSRS 110
Score = 126 (49.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 59/204 (28%), Positives = 81/204 (39%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQH--LAKLSGHKGAVWEVAWAHPK 67
H V V + LA+AS D +IK+ S A LS H VW + +
Sbjct: 143 HSQDVKRVVWHPTKEVLASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDAD- 201
Query: 68 FGSILASCSFDGTVIIWKE---GNSNEWI---KDHVFE-------DHKSSVNSIDWAPHE 114
G L SCS D T+ IW+ GN K V++ +H ++ + W
Sbjct: 202 -GERLVSCSDDATLKIWRAYHPGNDAGIATPDKTTVWKCVCTLSGEHSRAIYDVSWCKQT 260
Query: 115 LGLCLACGSSDGNISVFTARADGGWDTSRID------QAHPVGVTSVSWAPSTAPGALVG 168
+ ACG DG I +F +D D + AH V +V W P TA G L+
Sbjct: 261 GLIASACGD-DG-IRIFKECSDSKRDAPTFELLTAEESAHEQDVNAVEWNPVTA-GQLIS 317
Query: 169 SGFLDPVQKLCSGGCDNTVKVWKL 192
CS D T+K+WKL
Sbjct: 318 ----------CSD--DGTIKIWKL 329
Score = 124 (48.7 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 36/112 (32%), Positives = 56/112 (50%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
L S D T +W K +C L+ H + V+ V+W+ + GL +A+ S D V
Sbjct: 74 LASASFDATTAIWS------KHECTATLEGHENEVKSVSWSRSGGL----LATCSRDKSV 123
Query: 238 IIWTVAREGDQWE-GKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288
IW VA + D++E VL+ V RV W T +LA A +N + ++ E+
Sbjct: 124 WIWEVAGD-DEFECAAVLNAHSQDVKRVVWHPTKEVLASASYDNTIKMFAES 174
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 193 (73.0 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 81/303 (26%), Positives = 132/303 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ GH+ T+ +V G+ LA+AS D + I T A L GH+ V V+W+
Sbjct: 54 LSDGHKRTIREVRWSPCGEYLASASFDATTAIWSKHECT----ATLEGHENEVKSVSWS- 108
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
+ G +LA+CS D +V IW+ +E+ V H V + W P + LA S D
Sbjct: 109 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKE--ILASASYD 165
Query: 126 GNISVFTARA-DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD 184
I ++ A D WD + +H V S+ + A G ++L S D
Sbjct: 166 NTIKMYAESALDSDWDCTATLSSHTSTVWSIDF---DADG-----------ERLVSCSDD 211
Query: 185 NTVKVWKLYN-----GI--------WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA 231
T+K+W+ Y+ GI WK C + +HT + DV+W GL IASA
Sbjct: 212 ATLKIWRAYHPGNEAGIATPDKTTVWKCVCTLS-GLHTRAIYDVSWCKLTGL----IASA 266
Query: 232 SEDGKVIIWTVA----REGDQWEGKVLHD--FKTPVYRVSWSLT--GNILAVADGNNNVT 283
D + I+ + R+ +E + + V V W+ G +++ +D + +
Sbjct: 267 CGDDAIRIFKESSDSKRDAPSFELLTSEESAHEQDVNAVEWNPVNVGQLISCSD-DGTIK 325
Query: 284 LWE 286
+W+
Sbjct: 326 IWK 328
Score = 180 (68.4 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 76/290 (26%), Positives = 123/290 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPK 67
GH+ + VA G A+ D +I+I + NT LS GHK + EV W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWS-P- 69
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G LAS SFD T IW + + E H++ V S+ W+ GL C S D +
Sbjct: 70 CGEYLASASFDATTAIWSKHECTATL-----EGHENEVKSVSWS-RSGGLLATC-SRDKS 122
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDN-- 185
+ ++ D ++ + + AH V V W P+ L + + + ++ D+
Sbjct: 123 VWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKE--ILASASYDNTIKMYAESALDSDW 180
Query: 186 --TVKVWKLYNGIWKMDCFPA----LQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
T + + +W +D F A L +D W P + A+ D K +
Sbjct: 181 DCTATLSSHTSTVWSID-FDADGERLVSCSDDATLKIWRAYH--PGNEAGIATPD-KTTV 236
Query: 240 WTVAREGDQWEGKVLHDFKTPVYRVSW-SLTGNILAVADGNNNVTLWEEA 288
W G LH +Y VSW LTG ++A A G++ + +++E+
Sbjct: 237 WKCVCT---LSG--LHT--RAIYDVSWCKLTG-LIASACGDDAIRIFKES 278
Score = 155 (59.6 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 39/111 (35%), Positives = 56/111 (50%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSID 109
L GHKG +W VAW HPK G+ ASC D + IW + N W + D HK ++ +
Sbjct: 10 LQGHKGRIWGVAW-HPK-GNSFASCGEDKAIRIWSL-SGNTWTTKTILSDGHKRTIREVR 66
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
W+P G LA S D ++++ T+ ++ H V SVSW+ S
Sbjct: 67 WSP--CGEYLASASFDATTAIWSKHEC----TATLE-GHENEVKSVSWSRS 110
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 201 (75.8 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 94/313 (30%), Positives = 146/313 (46%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAW 63
Q +E H V V GK+L + S D ++KI T + L L GH G V +A+
Sbjct: 744 QTLEN-HLGPVESVVFSPDGKQLVSGSYDDTVKIWDPA--TGELLQTLDGHSGTVESLAF 800
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+ P G +LAS S+D T+ +W + + E ++ FE H S+ S+ +AP G LA S
Sbjct: 801 S-PD-GKLLASGSYDNTIDLW-DSATGELLQ--TFEGHPHSIWSVAFAPD--GKELASAS 853
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP-----------ST------APG-- 164
D I ++ A G + +D +H V SV+++P ST A G
Sbjct: 854 DDSTIKIWDL-ATGELQQT-LD-SHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGEL 910
Query: 165 --ALVG-SGFLDPV------QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDV 215
+L G SG++ V +KL SG NTVK+W G + L+ H+ VR V
Sbjct: 911 QQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATG----ELLQTLEGHSQSVRSV 966
Query: 216 AWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAV 275
A++P+ G +AS+S D + +W + G+ + HD + V++S G L
Sbjct: 967 AFSPD-G---KQLASSSSDTTIKLWN-STTGELQQTFKGHDLW--IRAVAFSPDGKHLVS 1019
Query: 276 ADGNNNVTLWEEA 288
+N + LW+ A
Sbjct: 1020 GSDDNTIKLWDLA 1032
Score = 195 (73.7 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 82/306 (26%), Positives = 126/306 (41%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH TV +A GK LA+ S D +I + + T + L GH ++W VA+A P
Sbjct: 790 GHSGTVESLAFSPDGKLLASGSYDNTIDLWD--SATGELLQTFEGHPHSIWSVAFA-PD- 845
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G LAS S D T+ IW + H SV S+ ++P G LA S D I
Sbjct: 846 GKELASASDDSTIKIWDLATGE---LQQTLDSHSQSVRSVAFSPD--GKLLASSSLDSTI 900
Query: 129 SVFTARA-------DG--GW--------DTSRIDQAHPVGVTSVSWAPSTAP--GALVGS 169
V+ +G GW D ++ + W P+T L G
Sbjct: 901 KVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKL-WNPATGELLQTLEGH 959
Query: 170 G-------FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLG 222
F ++L S D T+K+W G + + H W+R VA++P+ G
Sbjct: 960 SQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTG----ELQQTFKGHDLWIRAVAFSPD-G 1014
Query: 223 LPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNV 282
+ S S+D + +W +A Q + L D V+ V++S LA + ++ +
Sbjct: 1015 ---KHLVSGSDDNTIKLWDLATSELQ---QSLEDHSRSVHAVAFSPDDKQLASSSLDSTI 1068
Query: 283 TLWEEA 288
LW+ A
Sbjct: 1069 KLWDSA 1074
Score = 189 (71.6 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 88/312 (28%), Positives = 142/312 (45%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAK-LSGHKGAVWEVA 62
Q +E GH +V VA GK+LA++SSD +IK+ N+T+ L + GH +W A
Sbjct: 954 QTLE-GHSQSVRSVAFSPDGKQLASSSSDTTIKL---WNSTTGELQQTFKGHD--LWIRA 1007
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACG 122
A G L S S D T+ +W S ++ + EDH SV+++ ++P + L A
Sbjct: 1008 VAFSPDGKHLVSGSDDNTIKLWDLATSE--LQQSL-EDHSRSVHAVAFSPDDKQL--ASS 1062
Query: 123 SSDGNISVFTARADGGWDTSRIDQAHPVGVTSVS-------------------WAPSTAP 163
S D I ++ + A G + R + H GV SV+ W P T
Sbjct: 1063 SLDSTIKLWDS-ATG--ELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGE 1119
Query: 164 --GALVG-SGFLDPV------QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRD 214
L G S ++D V ++L SG D+T+K+W G + L+ H+D ++
Sbjct: 1120 LQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATG----ELLQTLEGHSDRIQS 1175
Query: 215 VAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILA 274
V ++P+ L +AS S D +W A G+ + + V V++S G +LA
Sbjct: 1176 VVFSPDGKL----LASGSYDQTAKLWDPAT-GELLQ--IFEGHSKWVESVAFSPDGKLLA 1228
Query: 275 VADGNNNVTLWE 286
+ + LW+
Sbjct: 1229 SSSYGETIKLWD 1240
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 80/298 (26%), Positives = 121/298 (40%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH ++ VA GK LA+AS D +IKI + Q L H +V VA++ P
Sbjct: 832 GHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQT--LDSHSQSVRSVAFS-PD- 887
Query: 69 GSILASCSFDGTVIIWK----------EGNSNEWIKDHVFE-DHK-----SSVNSID-WA 111
G +LAS S D T+ +W EG S W+K F D K S N++ W
Sbjct: 888 GKLLASSSLDSTIKVWNPATGELQQSLEGRSG-WVKSVAFSPDGKKLASGSEKNTVKLWN 946
Query: 112 PHELGLCLACGSSDGNISVFTARADGGW-DTSRIDQAHPVGVTSVSWAPSTAPGA---LV 167
P L ++ DG +S D + ++ T G +
Sbjct: 947 PATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIR 1006
Query: 168 GSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST 227
F + L SG DNT+K+W L + +L+ H+ V VA++P+
Sbjct: 1007 AVAFSPDGKHLVSGSDDNTIKLWDLATS----ELQQSLEDHSRSVHAVAFSPD----DKQ 1058
Query: 228 IASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW 285
+AS+S D + +W A Q + L V V++S G +LA + + LW
Sbjct: 1059 LASSSLDSTIKLWDSATGELQ---RTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLW 1113
Score = 145 (56.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 86/312 (27%), Positives = 126/312 (40%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAW 63
Q +E G V VA GK+LA+ S ++K+ T + L L GH +V VA+
Sbjct: 912 QSLE-GRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPA--TGELLQTLEGHSQSVRSVAF 968
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+ P G LAS S D T+ +W NS F+ H + ++ ++P G L GS
Sbjct: 969 S-PD-GKQLASSSSDTTIKLW---NSTTGELQQTFKGHDLWIRAVAFSPD--GKHLVSGS 1021
Query: 124 SDGNISVF---TARADGGW-DTSRIDQAHPVGVT------SVSWAPST------APGAL- 166
D I ++ T+ D SR H V + + S ST A G L
Sbjct: 1022 DDNTIKLWDLATSELQQSLEDHSR--SVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQ 1079
Query: 167 ---------VGSGFLDPVQKL-CSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVA 216
V S P KL S D T+K+W G + L +DWV VA
Sbjct: 1080 RTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTG----ELQQTLTGRSDWVDSVA 1135
Query: 217 WAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVA 276
++P+ G +AS D + +W A G+ + L + V +S G +LA
Sbjct: 1136 FSPD-G---KQLASGYYDSTIKLWDSAT-GELLQ--TLEGHSDRIQSVVFSPDGKLLASG 1188
Query: 277 DGNNNVTLWEEA 288
+ LW+ A
Sbjct: 1189 SYDQTAKLWDPA 1200
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 88/310 (28%), Positives = 128/310 (41%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAW 63
Q+ H +V VA GK LA++S D +IK+ Q L G G V VA+
Sbjct: 869 QQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQ--SLEGRSGWVKSVAF 926
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+ P G LAS S TV +W + E ++ E H SV S+ ++P G LA S
Sbjct: 927 S-PD-GKKLASGSEKNTVKLWNPA-TGELLQ--TLEGHSQSVRSVAFSPD--GKQLASSS 979
Query: 124 SDGNISVFTARADG------GWDT-SRIDQAHPVGVTSVS---------W--APSTAPGA 165
SD I ++ + G D R P G VS W A S +
Sbjct: 980 SDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQS 1039
Query: 166 L------VGSGFLDPVQK-LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWA 218
L V + P K L S D+T+K+W G + L+ H+ VR V ++
Sbjct: 1040 LEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATG----ELQRTLEGHSQGVRSVTFS 1095
Query: 219 PNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADG 278
P+ L +AS S DG + +W G+ + L V V++S G LA
Sbjct: 1096 PDGKL----LASNSYDGTIKLWNPLT-GELQQ--TLTGRSDWVDSVAFSPDGKQLASGYY 1148
Query: 279 NNNVTLWEEA 288
++ + LW+ A
Sbjct: 1149 DSTIKLWDSA 1158
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 138 (53.6 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 45/133 (33%), Positives = 64/133 (48%)
Query: 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVA 62
P + +GHE V+ +G LA+A D I + V + + A L GH GAV E+
Sbjct: 85 PIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELH 143
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLAC- 121
+ GS+L S S D TV +W + + E +K + H S VNS P G L C
Sbjct: 144 YNTD--GSMLFSASTDKTVAVW-DSETGERVKR--LKGHTSFVNSC--YPARRGPQLVCT 196
Query: 122 GSSDGNISVFTAR 134
GS DG + ++ R
Sbjct: 197 GSDDGTVKLWDIR 209
Score = 99 (39.9 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 35/122 (28%), Positives = 56/122 (45%)
Query: 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
F D ++ SGG DN +KVW L K+ ++ H D V ++ L S + S
Sbjct: 228 FNDTSDQIISGGIDNDIKVWDLRQN--KLTY--TMRGHADSVTGLS----LSSEGSYLLS 279
Query: 231 ASEDGKVIIWTVAREGDQ------WEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTL 284
+ D V IW V + ++G V H+F+ + R SWS G+ +A + V +
Sbjct: 280 NAMDNTVRIWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWSPDGSKIAGGSADRFVYV 338
Query: 285 WE 286
W+
Sbjct: 339 WD 340
Score = 80 (33.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 35/129 (27%), Positives = 59/129 (45%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-GNSNEWIKDHVFEDHKSSVNSID 109
LSGH+G V+ + HP +G+ LAS FD +++W G+ + + + H +V +
Sbjct: 89 LSGHEGEVYCCKF-HP-WGNTLASAGFDRLILLWNVYGDCDNYA---TLKGHSGAVMELH 143
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 169
+ G L S+D ++V+ + G R+ + H V S P+ LV +
Sbjct: 144 YNTD--GSMLFSASTDKTVAVWDSET--GERVKRL-KGHTSFVNSCY--PARRGPQLVCT 196
Query: 170 GFLDPVQKL 178
G D KL
Sbjct: 197 GSDDGTVKL 205
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 189 (71.6 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 66/218 (30%), Positives = 94/218 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
++ GH+ V VA G LA+AS D + I N+ + L L GH+ V VAWA
Sbjct: 56 LQDGHQRAVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWA- 114
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
P G+ LA+CS D +V IW+ +E+ V H V + W P + L +C S D
Sbjct: 115 PS-GNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQ-ELLASC-SYD 171
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS-GGCD 184
N+ V+ D W+ + H V +++ PS A + K C GG
Sbjct: 172 NNVCVYKEE-DDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDDRTVKIWKECQPGGGQ 230
Query: 185 NTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLG 222
+T WK C + H V D+AW P G
Sbjct: 231 DTA---------WKCVCTLS-GFHGRTVYDIAWCPLTG 258
Score = 174 (66.3 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 71/246 (28%), Positives = 107/246 (43%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQH-LAKLSGHKGAVWEVAWAHPK 67
GHE+ V VA G +LAT S D S+ I V ++ ++ H V V W HP
Sbjct: 103 GHENEVKCVAWAPSGNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVW-HPT 161
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
+LASCS+D V ++KE ++W E H S+V + + P G LA S D
Sbjct: 162 -QELLASCSYDNNVCVYKE-EDDDWECRATLEGHTSTVWGLTFDPS--GQRLASCSDDRT 217
Query: 128 ISVFT-ARADGGWDTS-----RIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSG 181
+ ++ + GG DT+ + H V ++W P T GAL + D V+
Sbjct: 218 VKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLT--GALATACGDDGVRVFKED 275
Query: 182 G-CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPN-LGLPKSTIASASEDGKVII 239
D V+ L + K H+ V +AW P GL + S S++G++ +
Sbjct: 276 ETADPDQPVFSLSAHVPKA--------HSQDVNCIAWHPKEAGL----LVSCSDNGEIAV 323
Query: 240 WTVARE 245
W E
Sbjct: 324 WNYQSE 329
Score = 146 (56.5 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 40/116 (34%), Positives = 61/116 (52%)
Query: 48 LAKLSGHKGA-VWEVAWAHPKFGSILASCSFDGTVIIW-KEGNSNEWIKDHVFED-HKSS 104
L K + H + W VAW +PK G++LASC D + IW +EG+S W V +D H+ +
Sbjct: 8 LQKFNAHPDSRCWYVAW-NPK-GTLLASCGGDRAIRIWGREGDS--WECKTVLQDGHQRA 63
Query: 105 VNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
V + W+P G LA S D ++ + D ++ + + H V V+WAPS
Sbjct: 64 VRKVAWSP--CGNYLASASFDATTCIWKKKNDD-FECLTVLEGHENEVKCVAWAPS 116
Score = 138 (53.6 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 55/174 (31%), Positives = 73/174 (41%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ H V V + LA+ S D ++ + ++ + A L GH VW + +
Sbjct: 145 VVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTF-D 203
Query: 66 PKFGSILASCSFDGTVIIWKE-----GNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCL 119
P G LASCS D TV IWKE G W H +V I W P L
Sbjct: 204 PS-GQRLASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLTGALAT 262
Query: 120 ACGSSDGNISVF----TARADGG-WDTS-RIDQAHPVGVTSVSWAPSTAPGALV 167
ACG DG + VF TA D + S + +AH V ++W P A G LV
Sbjct: 263 ACGD-DG-VRVFKEDETADPDQPVFSLSAHVPKAHSQDVNCIAWHPKEA-GLLV 313
Score = 133 (51.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 38/111 (34%), Positives = 56/111 (50%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
L S D T +WK N +C L+ H + V+ VAWAP+ G + +A+ S D V
Sbjct: 76 LASASFDATTCIWKKKND--DFECLTVLEGHENEVKCVAWAPS-G---NQLATCSRDKSV 129
Query: 238 IIWTVAREGDQWEG-KVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287
IW V E D++E V++ V V W T +LA +NNV +++E
Sbjct: 130 WIWEVDEE-DEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKE 179
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/111 (34%), Positives = 55/111 (49%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQM-HTDWVRDVAWAPNLGLPKSTIASASEDGK 236
L S G D +++W W +C LQ H VR VAW+P G + +ASAS D
Sbjct: 31 LASCGGDRAIRIWGREGDSW--ECKTVLQDGHQRAVRKVAWSP-CG---NYLASASFDAT 84
Query: 237 VIIWTVAREGDQWEG-KVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
IW ++ D +E VL + V V+W+ +GN LA + +V +WE
Sbjct: 85 TCIWK--KKNDDFECLTVLEGHENEVKCVAWAPSGNQLATCSRDKSVWIWE 133
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 57/198 (28%), Positives = 89/198 (44%)
Query: 97 VFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVS 156
V E H++ V + WAP G LA S D ++ ++ + ++ + +H V V
Sbjct: 100 VLEGHENEVKCVAWAPS--GNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVV 157
Query: 157 WAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVA 216
W P+ L+ S CS DN V V+K + W +C L+ HT V +
Sbjct: 158 WHPTQE---LLAS---------CS--YDNNVCVYKEEDDDW--ECRATLEGHTSTVWGLT 201
Query: 217 WAPNLGLPKSTIASASEDGKVIIWTVAREGD----QWEGK-VLHDFK-TPVYRVSWS-LT 269
+ P+ G +AS S+D V IW + G W+ L F VY ++W LT
Sbjct: 202 FDPS-G---QRLASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLT 257
Query: 270 GNILAVADGNNNVTLWEE 287
G LA A G++ V +++E
Sbjct: 258 G-ALATACGDDGVRVFKE 274
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 189 (71.6 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 75/295 (25%), Positives = 132/295 (44%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ GH+ T+ ++ G+ LA+AS D + I + + A L GH+ V V+W+
Sbjct: 54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS- 112
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
+ G +LA+CS D +V IW+ +E+ V H V + W P + LA S D
Sbjct: 113 -RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKD--ILASASYD 169
Query: 126 GNISVFT-ARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSG--- 181
I +F ++ D WD + +H V S+ + A G + S D K+
Sbjct: 170 NTIKMFAESQLDSDWDCTATLSSHTSTVWSIDF---DAEGDRLVSCSDDKTLKIWRAYHP 226
Query: 182 GCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA-SEDG-KVII 239
G D + + +WK C + Q H+ + DV+W GL IA+ +DG ++
Sbjct: 227 GNDAGIATPDKQS-VWKCVCTLSGQ-HSRAIYDVSWCKLTGL----IATGCGDDGIRIFK 280
Query: 240 WTVAREGDQ--WEGKVLHD--FKTPVYRVSWS--LTGNILAVADGNNNVTLWEEA 288
T + D+ +E + + V V W+ + G +++ +D + + +W+ A
Sbjct: 281 ETSDSKRDEPTFEQLTAEETAHEQDVNAVEWNPAVAGQLISCSD-DGTIKIWKVA 334
Score = 184 (69.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 74/289 (25%), Positives = 125/289 (43%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPK 67
GH+ + VA G A+ D +I++ + NT LS GHK + E+ W+ P
Sbjct: 12 GHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWS-P- 69
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G LAS SFD T IW + +S E+ + E H++ V S+ W+ GL C S D +
Sbjct: 70 CGQYLASASFDATTAIWSK-SSGEFECNATLEGHENEVKSVSWS-RSGGLLATC-SRDKS 126
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDN-- 185
+ ++ D ++ + + AH V V W P+ L + + + ++ D+
Sbjct: 127 VWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTK--DILASASYDNTIKMFAESQLDSDW 184
Query: 186 --TVKVWKLYNGIWKMDCFPA----LQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
T + + +W +D F A L +D W P + A+ D K +
Sbjct: 185 DCTATLSSHTSTVWSID-FDAEGDRLVSCSDDKTLKIWRAYH--PGNDAGIATPD-KQSV 240
Query: 240 WTVAREGDQWEGKVLHDFKTPVYRVSW-SLTGNILAVADGNNNVTLWEE 287
W G+ H +Y VSW LTG ++A G++ + +++E
Sbjct: 241 WKCVCT---LSGQ--HS--RAIYDVSWCKLTG-LIATGCGDDGIRIFKE 281
Score = 177 (67.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 39/111 (35%), Positives = 60/111 (54%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSID 109
L GHKG +W VAW HPK G++ ASC D + +W + N W + D HK ++ I
Sbjct: 10 LQGHKGRIWGVAW-HPK-GNVFASCGEDKAIRVWSL-SGNTWSTKTILSDGHKRTIREIR 66
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
W+P G LA S D ++++ ++ G ++ + + H V SVSW+ S
Sbjct: 67 WSP--CGQYLASASFDATTAIWS-KSSGEFECNATLEGHENEVKSVSWSRS 114
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 134 (52.2 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 45/133 (33%), Positives = 63/133 (47%)
Query: 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVA 62
P + +GHE V+ G LA+A D I + V + + A L GH GAV E+
Sbjct: 58 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELH 116
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLAC- 121
+ GS+L S S D TV +W + + E +K + H S VNS P G L C
Sbjct: 117 YNTD--GSMLFSASTDKTVAVW-DSETGERVKR--LKGHTSFVNSC--YPARRGPQLVCT 169
Query: 122 GSSDGNISVFTAR 134
GS DG + ++ R
Sbjct: 170 GSDDGTVKLWDIR 182
Score = 101 (40.6 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
F D ++ SGG DN +KVW L K+ ++ H D V ++ L S + S
Sbjct: 201 FNDTSDQIISGGIDNDIKVWDLRQN--KLTY--TMRGHADSVTGLS----LSSEGSYLLS 252
Query: 231 ASEDGKVIIWTVAREGDQ------WEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTL 284
+ D V +W V + ++G V H+F+ + R SWS G+ +A + V +
Sbjct: 253 NAMDNTVRVWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWSPDGSKIAAGSADRFVYV 311
Query: 285 WE 286
W+
Sbjct: 312 WD 313
Score = 82 (33.9 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 36/129 (27%), Positives = 58/129 (44%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-GNSNEWIKDHVFEDHKSSVNSID 109
LSGH+G V+ + HP GS LAS FD +++W G+ + + + H +V +
Sbjct: 62 LSGHEGEVYCCKF-HPN-GSTLASAGFDRLILLWNVYGDCDNYA---TLKGHSGAVMELH 116
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 169
+ G L S+D ++V+ + G R+ + H V S P+ LV +
Sbjct: 117 YNTD--GSMLFSASTDKTVAVWDSET--GERVKRL-KGHTSFVNSCY--PARRGPQLVCT 169
Query: 170 GFLDPVQKL 178
G D KL
Sbjct: 170 GSDDGTVKL 178
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 134 (52.2 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 45/133 (33%), Positives = 63/133 (47%)
Query: 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVA 62
P + +GHE V+ G LA+A D I + V + + A L GH GAV E+
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELH 117
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLAC- 121
+ GS+L S S D TV +W + + E +K + H S VNS P G L C
Sbjct: 118 YNTD--GSMLFSASTDKTVAVW-DSETGERVKR--LKGHTSFVNSC--YPARRGPQLVCT 170
Query: 122 GSSDGNISVFTAR 134
GS DG + ++ R
Sbjct: 171 GSDDGTVKLWDIR 183
Score = 101 (40.6 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
F D ++ SGG DN +KVW L K+ ++ H D V ++ L S + S
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQN--KLTY--TMRGHADSVTGLS----LSSEGSYLLS 253
Query: 231 ASEDGKVIIWTVAREGDQ------WEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTL 284
+ D V +W V + ++G V H+F+ + R SWS G+ +A + V +
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Query: 285 WE 286
W+
Sbjct: 313 WD 314
Score = 82 (33.9 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 36/129 (27%), Positives = 58/129 (44%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-GNSNEWIKDHVFEDHKSSVNSID 109
LSGH+G V+ + HP GS LAS FD +++W G+ + + + H +V +
Sbjct: 63 LSGHEGEVYCCKF-HPN-GSTLASAGFDRLILLWNVYGDCDNYA---TLKGHSGAVMELH 117
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 169
+ G L S+D ++V+ + G R+ + H V S P+ LV +
Sbjct: 118 YNTD--GSMLFSASTDKTVAVWDSET--GERVKRL-KGHTSFVNSCY--PARRGPQLVCT 170
Query: 170 GFLDPVQKL 178
G D KL
Sbjct: 171 GSDDGTVKL 179
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 134 (52.2 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 45/133 (33%), Positives = 63/133 (47%)
Query: 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVA 62
P + +GHE V+ G LA+A D I + V + + A L GH GAV E+
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELH 117
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLAC- 121
+ GS+L S S D TV +W + + E +K + H S VNS P G L C
Sbjct: 118 YNTD--GSMLFSASTDKTVAVW-DSETGERVKR--LKGHTSFVNSC--YPARRGPQLVCT 170
Query: 122 GSSDGNISVFTAR 134
GS DG + ++ R
Sbjct: 171 GSDDGTVKLWDIR 183
Score = 101 (40.6 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
F D ++ SGG DN +KVW L K+ ++ H D V ++ L S + S
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQN--KLTY--TMRGHADSVTGLS----LSSEGSYLLS 253
Query: 231 ASEDGKVIIWTVAREGDQ------WEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTL 284
+ D V +W V + ++G V H+F+ + R SWS G+ +A + V +
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVRIFQGNV-HNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Query: 285 WE 286
W+
Sbjct: 313 WD 314
Score = 82 (33.9 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 36/129 (27%), Positives = 58/129 (44%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-GNSNEWIKDHVFEDHKSSVNSID 109
LSGH+G V+ + HP GS LAS FD +++W G+ + + + H +V +
Sbjct: 63 LSGHEGEVYCCKF-HPN-GSTLASAGFDRLILLWNVYGDCDNYA---TLKGHSGAVMELH 117
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 169
+ G L S+D ++V+ + G R+ + H V S P+ LV +
Sbjct: 118 YNTD--GSMLFSASTDKTVAVWDSET--GERVKRL-KGHTSFVNSCY--PARRGPQLVCT 170
Query: 170 GFLDPVQKL 178
G D KL
Sbjct: 171 GSDDGTVKL 179
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 134 (52.2 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 45/133 (33%), Positives = 63/133 (47%)
Query: 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVA 62
P + +GHE V+ G LA+A D I + V + + A L GH GAV E+
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELH 117
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLAC- 121
+ GS+L S S D TV +W + + E +K + H S VNS P G L C
Sbjct: 118 YNTD--GSMLFSASTDKTVAVW-DSETGERVKR--LKGHTSFVNSC--YPARRGPQLVCT 170
Query: 122 GSSDGNISVFTAR 134
GS DG + ++ R
Sbjct: 171 GSDDGTVKLWDIR 183
Score = 101 (40.6 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
F D ++ SGG DN +KVW L K+ ++ H D V ++ L S + S
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQN--KLTY--TMRGHADSVTGLS----LSSEGSYLLS 253
Query: 231 ASEDGKVIIWTVAREGDQ------WEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTL 284
+ D V +W V + ++G V H+F+ + R SWS G+ +A + V +
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Query: 285 WE 286
W+
Sbjct: 313 WD 314
Score = 82 (33.9 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 36/129 (27%), Positives = 58/129 (44%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-GNSNEWIKDHVFEDHKSSVNSID 109
LSGH+G V+ + HP GS LAS FD +++W G+ + + + H +V +
Sbjct: 63 LSGHEGEVYCCKF-HPN-GSTLASAGFDRLILLWNVYGDCDNYA---TLKGHSGAVMELH 117
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 169
+ G L S+D ++V+ + G R+ + H V S P+ LV +
Sbjct: 118 YNTD--GSMLFSASTDKTVAVWDSET--GERVKRL-KGHTSFVNSCY--PARRGPQLVCT 170
Query: 170 GFLDPVQKL 178
G D KL
Sbjct: 171 GSDDGTVKL 179
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 134 (52.2 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 45/133 (33%), Positives = 63/133 (47%)
Query: 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVA 62
P + +GHE V+ G LA+A D I + V + + A L GH GAV E+
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELH 117
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLAC- 121
+ GS+L S S D TV +W + + E +K + H S VNS P G L C
Sbjct: 118 YNTD--GSMLFSASTDKTVAVW-DSETGERVKR--LKGHTSFVNSC--YPARRGPQLVCT 170
Query: 122 GSSDGNISVFTAR 134
GS DG + ++ R
Sbjct: 171 GSDDGTVKLWDIR 183
Score = 101 (40.6 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
F D ++ SGG DN +KVW L K+ ++ H D V ++ L S + S
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQN--KLTY--TMRGHADSVTGLS----LSSEGSYLLS 253
Query: 231 ASEDGKVIIWTVAREGDQ------WEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTL 284
+ D V +W V + ++G V H+F+ + R SWS G+ +A + V +
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Query: 285 WE 286
W+
Sbjct: 313 WD 314
Score = 82 (33.9 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 36/129 (27%), Positives = 58/129 (44%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-GNSNEWIKDHVFEDHKSSVNSID 109
LSGH+G V+ + HP GS LAS FD +++W G+ + + + H +V +
Sbjct: 63 LSGHEGEVYCCKF-HPN-GSTLASAGFDRLILLWNVYGDCDNYA---TLKGHSGAVMELH 117
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 169
+ G L S+D ++V+ + G R+ + H V S P+ LV +
Sbjct: 118 YNTD--GSMLFSASTDKTVAVWDSET--GERVKRL-KGHTSFVNSCY--PARRGPQLVCT 170
Query: 170 GFLDPVQKL 178
G D KL
Sbjct: 171 GSDDGTVKL 179
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 134 (52.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 45/133 (33%), Positives = 63/133 (47%)
Query: 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVA 62
P + +GHE V+ G LA+A D I + V + + A L GH GAV E+
Sbjct: 58 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELH 116
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLAC- 121
+ GS+L S S D TV +W + + E +K + H S VNS P G L C
Sbjct: 117 YNTD--GSMLFSASTDKTVAVW-DSETGERVKR--LKGHTSFVNSC--YPARRGPQLVCT 169
Query: 122 GSSDGNISVFTAR 134
GS DG + ++ R
Sbjct: 170 GSDDGTVKLWDIR 182
Score = 101 (40.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
F D ++ SGG DN +KVW L K+ ++ H D V ++ L S + S
Sbjct: 201 FNDTSDQIISGGIDNDIKVWDLRQN--KLTY--TMRGHADSVTGLS----LSSEGSYLLS 252
Query: 231 ASEDGKVIIWTVAREGDQ------WEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTL 284
+ D V +W V + ++G V H+F+ + R SWS G+ +A + V +
Sbjct: 253 NAMDNTVRVWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWSPDGSKIAAGSADRFVYV 311
Query: 285 WE 286
W+
Sbjct: 312 WD 313
Score = 82 (33.9 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 36/129 (27%), Positives = 58/129 (44%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-GNSNEWIKDHVFEDHKSSVNSID 109
LSGH+G V+ + HP GS LAS FD +++W G+ + + + H +V +
Sbjct: 62 LSGHEGEVYCCKF-HPN-GSTLASAGFDRLILLWNVYGDCDNYA---TLKGHSGAVMELH 116
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 169
+ G L S+D ++V+ + G R+ + H V S P+ LV +
Sbjct: 117 YNTD--GSMLFSASTDKTVAVWDSET--GERVKRL-KGHTSFVNSCY--PARRGPQLVCT 169
Query: 170 GFLDPVQKL 178
G D KL
Sbjct: 170 GSDDGTVKL 178
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 141 (54.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 51/168 (30%), Positives = 76/168 (45%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH+ ++ + YG LA+ SD I + V + + L GHKG + E+ W+
Sbjct: 60 GHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINY-SVLKGHKGTILELHWSTDS- 117
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCL-ACGSSDGN 127
I +C+ D ++ +W + N E IK +H VNS P G L A GS D +
Sbjct: 118 NEIYTACT-DKSIGVW-DSNKGELIKR--IREHSGVVNSC--CPARRGPPLVASGSDDRS 171
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPV 175
+F R+ G T +PV TSV + S A L+ G +D V
Sbjct: 172 ARIFDTRSKGS--THLFQHKYPV--TSVCF--SDASDQLITGG-IDNV 212
Score = 90 (36.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 29/122 (23%), Positives = 53/122 (43%)
Query: 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
F D +L +GG DN ++VW + N + D L H D + + + + G + + S
Sbjct: 197 FSDASDQLITGGIDNVIRVWDIRN---QEDPLYTLASHQDTITSTSVSKD-G---AYLLS 249
Query: 231 ASEDGKVIIWTVA------REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTL 284
S D IW + R + G ++F+ + + SWS+ G + + V +
Sbjct: 250 NSMDNSCKIWDIRPYAPPNRNIKTFNG-AQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYI 308
Query: 285 WE 286
W+
Sbjct: 309 WD 310
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 188 (71.2 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 66/212 (31%), Positives = 94/212 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D V+D+A+D GK+L + SSD SIK+ G T L L GH+ V V + P
Sbjct: 146 GHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQ-TYDCLKSLKGHEHTVSSVTFL-PT- 202
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G + S S D T+ W + ++ + + F H V I + G A S D +
Sbjct: 203 GDFVLSASRDHTIKQW-DISTGYCV--YTFRGHNDWVRMIRISND--GTLFASASLDQTV 257
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFL-DPVQKLCSGGCDNTV 187
+V++ R D H V V WAP TA + G + L SG D ++
Sbjct: 258 TVWSFATKSAKLVLR-DHEH--AVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSI 314
Query: 188 KVWKLYNGIWKMDCFPALQMHTDWVRDVAWAP 219
K W + G D L H +WVR +A+ P
Sbjct: 315 KAWNINTG----DVLFTLLAHENWVRGLAFHP 342
Score = 131 (51.2 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 53/211 (25%), Positives = 89/211 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GHE TV V G + +AS D++IK + +T + GH V + ++
Sbjct: 189 GHEHTVSSVTFLPTGDFVLSASRDHTIKQWDI--STGYCVYTFRGHNDWVRMIRISND-- 244
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G++ AS S D TV +W + + V DH+ +V ++WAP + +GN
Sbjct: 245 GTLFASASLDQTVTVWSFATKSAKL---VLRDHEHAVECVEWAPDTAYTNVTGQQPEGNS 301
Query: 129 S--VFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNT 186
+ +F+ D R +A + V + + G F + L S D T
Sbjct: 302 THILFSGSRD------RSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKT 355
Query: 187 VKVWKLYNGIWKMDCFPALQMHTDWVRDVAW 217
++VW+L C A++ H +V VA+
Sbjct: 356 LRVWELS----AQRCMKAIEAHEHFVSTVAF 382
Score = 93 (37.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 36/115 (31%), Positives = 61/115 (53%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW--KEGNSNEWIKDHVFEDHKSSVNS 107
KL+GH+ + V + HP + +I+ASCS D T+ +W + G +K H D + + +
Sbjct: 101 KLTGHRLPITRVIF-HPLW-TIMASCSEDATIKVWDYETGQLERTLKGHT--DAVNDI-A 155
Query: 108 IDWAPHELGLCLACGSSDGNISVFTARADGG--WDTSRIDQAHPVGVTSVSWAPS 160
ID A +L C SSD +I ++ D G +D + + H V+SV++ P+
Sbjct: 156 IDAAGKQLVSC----SSDLSIKLW----DFGQTYDCLKSLKGHEHTVSSVTFLPT 202
Score = 88 (36.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 30/97 (30%), Positives = 44/97 (45%)
Query: 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
FL + S D+T+K W + G C + H DWVR + + N G + AS
Sbjct: 199 FLPTGDFVLSASRDHTIKQWDISTGY----CVYTFRGHNDWVRMIRIS-NDG---TLFAS 250
Query: 231 ASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWS 267
AS D V +W+ A + + VL D + V V W+
Sbjct: 251 ASLDQTVTVWSFATKSAKL---VLRDHEHAVECVEWA 284
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 187 (70.9 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 70/238 (29%), Positives = 107/238 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D+V D++ D+ GK LA+ S+D +IK+ + + + GH V VA P
Sbjct: 148 GHTDSVQDISFDHTGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G + S S D T+ +W E + +K F H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMW-EVATGYCVK--TFTGHREWVRMV--RPNQDGTLIASSSNDQTV 258
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTA-PGALVGSGFLD-----PVQKLCSGG 182
V+ + + H V +SWAP +A P L +G P L SG
Sbjct: 259 RVWVVATK---ECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGS 315
Query: 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
D T+K+W + G+ C L H +WVR V P G I S ++D + IW
Sbjct: 316 RDKTIKMWDVSIGM----CLMTLVGHDNWVRGVLVHPG-G---KYIVSCADDKTLRIW 365
Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
Identities = 64/259 (24%), Positives = 100/259 (38%)
Query: 2 PPQKIE-TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
PP+K +GH V V + +AS D +IK+ + T L GH +V +
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWD--HETGDFERTLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA 120
+++ H G +LASCS D T+ +W + E I+ DH +V+S+ P+ G +
Sbjct: 156 ISFDHT--GKLLASCSADMTIKLW-DFQGFECIRTMHGHDH--NVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
S D I ++ G+ H W P G L + S
Sbjct: 209 SASRDKTIKMWEVAT--GYCVKTFT-GHR------EWVRMVRPNQ---DGTL-----IAS 251
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL----------------GLP 224
D TV+VW + +C L+ H V ++WAP G P
Sbjct: 252 SSNDQTVRVWVVAT----KECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKP 307
Query: 225 KSTIASASEDGKVIIWTVA 243
+ S S D + +W V+
Sbjct: 308 GPFLLSGSRDKTIKMWDVS 326
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 185 (70.2 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 75/253 (29%), Positives = 111/253 (43%)
Query: 48 LAKLSGHKGAVWEVAW----AHPKFGS-ILASCSFDGTVIIWKEGN-SNEWIKDHVFED- 100
+ KL GH VW VAW +H S ILASCS D TV IW++ + S W V E+
Sbjct: 13 IQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET 72
Query: 101 HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
H +V S W+P G LA S DG ++ S ++ H V SVSW
Sbjct: 73 HTRTVRSCAWSPS--GQLLATASFDGTTGIWKNYGSEFECISTLE-GHENEVKSVSW--- 126
Query: 161 TAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPN 220
A G+ + + CS D +V +W++ G + DC L HT V+ V W P
Sbjct: 127 NASGSCLAT---------CSR--DKSVWIWEVLEGN-EYDCAAVLTGHTQDVKMVQWHPT 174
Query: 221 LGLPKS-----TIA---SASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNI 272
+ + S TI S +DG+ V G+ G H + V+ +S++ G+
Sbjct: 175 MDVLFSCSYDNTIKVWWSEDDDGEY--QCVQTLGESNNG---HS--STVWSISFNAAGDK 227
Query: 273 LAVADGNNNVTLW 285
+ + + +W
Sbjct: 228 MVTCSDDLTLKIW 240
Score = 156 (60.0 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 68/248 (27%), Positives = 105/248 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAWAHPK 67
GHE+ V V+ + G LAT S D S+ I V N A L+GH V V W HP
Sbjct: 116 GHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQW-HPT 174
Query: 68 FGSILASCSFDGTVIIW-KEGNSNEWIKDHVFEDHKSSVNSIDWAP--HELGLCLACGSS 124
+L SCS+D T+ +W E + E+ + + +S W+ + G + S
Sbjct: 175 M-DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSD 233
Query: 125 DGNISVF---TARADGG-----W-DTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPV 175
D + ++ A+ G W + H + S W+ ++ SG D
Sbjct: 234 DLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSRDD----IIASGAGDNA 289
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG 235
+L ++V YN + K + + H + V V W+P G +ASAS+DG
Sbjct: 290 IRLFVDSKHDSVD-GPSYNLLLKKN-----KAHENDVNSVQWSPGEG--NRLLASASDDG 341
Query: 236 KVIIWTVA 243
V IW +A
Sbjct: 342 MVKIWQLA 349
Score = 153 (58.9 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 46/143 (32%), Positives = 70/143 (48%)
Query: 146 QAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPAL 205
+ H V SV+W P ++ G + P+ CSG DNTV++W+ + C L
Sbjct: 17 EGHTDRVWSVAWNPVSSHA----DG-VSPILASCSG--DNTVRIWEQSSLSRSWTCKTVL 69
Query: 206 Q-MHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEG-KVLHDFKTPVYR 263
+ HT VR AW+P+ L +A+AS DG IW G ++E L + V
Sbjct: 70 EETHTRTVRSCAWSPSGQL----LATASFDGTTGIWK--NYGSEFECISTLEGHENEVKS 123
Query: 264 VSWSLTGNILAVADGNNNVTLWE 286
VSW+ +G+ LA + +V +WE
Sbjct: 124 VSWNASGSCLATCSRDKSVWIWE 146
Score = 146 (56.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 43/133 (32%), Positives = 62/133 (46%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+E H TV A G+ LATAS D + I + + ++ L GH+ V V+W
Sbjct: 69 LEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNA 128
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
GS LA+CS D +V IW+ NE+ V H V + W P + + +C S D
Sbjct: 129 S--GSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHP-TMDVLFSC-SYD 184
Query: 126 GNISVFTARADGG 138
I V+ + D G
Sbjct: 185 NTIKVWWSEDDDG 197
Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 55/201 (27%), Positives = 83/201 (41%)
Query: 91 EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPV 150
E ++ E H V S+ W P +DG +S A G +T RI + +
Sbjct: 9 ELVEIQKLEGHTDRVWSVAWNP-------VSSHADG-VSPILASCSGD-NTVRIWEQSSL 59
Query: 151 GVTSVSWAPSTA----PGALVGSGFLDPV-QKLCSGGCDNTVKVWKLYNGIWKMDCFPAL 205
S SW T V S P Q L + D T +WK Y + +C L
Sbjct: 60 ---SRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGS--EFECISTL 114
Query: 206 QMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWE-GKVLHDFKTPVYRV 264
+ H + V+ V+W + G S +A+ S D V IW V EG++++ VL V V
Sbjct: 115 EGHENEVKSVSWNAS-G---SCLATCSRDKSVWIWEVL-EGNEYDCAAVLTGHTQDVKMV 169
Query: 265 SWSLTGNILAVADGNNNVTLW 285
W T ++L +N + +W
Sbjct: 170 QWHPTMDVLFSCSYDNTIKVW 190
Score = 114 (45.2 bits), Expect = 0.00048, P = 0.00048
Identities = 47/201 (23%), Positives = 85/201 (42%)
Query: 99 EDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWA 158
E H++ V S+ W + G CLA S D ++ ++ +D + + H V V W
Sbjct: 115 EGHENEVKSVSW--NASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWH 172
Query: 159 PSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWA 218
P+ +D V CS DNT+KVW + + C L + W+
Sbjct: 173 PT-----------MD-VLFSCS--YDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWS 218
Query: 219 PNLGLPKSTIASASEDGKVIIW--TVAR--EGDQWEGKV-------LHDFKTPVYRVSWS 267
+ + + S+D + IW +A+ G+++ + HD +T +Y WS
Sbjct: 219 ISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHD-RT-IYSAHWS 276
Query: 268 LTGNILAVADGNNNVTLWEEA 288
+I+A G+N + L+ ++
Sbjct: 277 -RDDIIASGAGDNAIRLFVDS 296
>POMBASE|SPAC806.02c [details] [associations]
symbol:SPAC806.02c "Par A family ATPase/WD repeat iron
cluster assembly fusion protein (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0043234 "protein complex" evidence=NAS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR000808 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS01215 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC806.02c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0043234 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
eggNOG:COG2319 GO:GO:0016887 GO:GO:0051539 GO:GO:0016226
InterPro:IPR019591 Pfam:PF10609 PIR:T39094 RefSeq:NP_592852.1
ProteinModelPortal:Q9UT57 EnsemblFungi:SPAC806.02c.1 GeneID:2542122
KEGG:spo:SPAC806.02c OrthoDB:EOG4XKZGD NextBio:20803194
Uniprot:Q9UT57
Length = 608
Score = 188 (71.2 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 82/305 (26%), Positives = 131/305 (42%)
Query: 3 PQKIET-----GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSG-HKG 56
P+K++T GH + VA AT+S D S++I +NT + + G H
Sbjct: 277 PRKLDTITTISGHTGRLWSVAAHPMLPLFATSSQDKSVRIYN--SNTYNLVHVIDGFHTR 334
Query: 57 AVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELG 116
++ VAW P +LA SFD V I E ++W E H++ V I W+ + G
Sbjct: 335 SIRRVAW-RPIERPVLAVASFDSVVSI-NEKIDDDWECTAALEGHENEVKCIAWSCN--G 390
Query: 117 LCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQ 176
LA S D ++ ++ A D +D + Q H V V+W P+
Sbjct: 391 NYLATCSRDKSVWIWEATEDDEFDCLAVLQEHTQDVKVVTWHPTE--------------D 436
Query: 177 KLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTI-------- 228
L SG DN++ W+ W + C LQ HT+ V +A++PN S
Sbjct: 437 LLVSGSYDNSICFWRDDGDDWALTC--QLQGHTNTVWALAFSPNGNTLASADNDGNVFLW 494
Query: 229 --ASASEDGKVIIWT-VAREG--DQWEGKVL--HDFKTPVYRVSWSLTGNILAVADGNNN 281
S++ED I T + R ++W+ + H K VY +SW + L A G+
Sbjct: 495 IKISSNEDVATIDSTNILRPALQEEWKQQTSLPHIHKGAVYTISW-MNDATLCSAGGDGK 553
Query: 282 VTLWE 286
+ +++
Sbjct: 554 IVVYQ 558
Score = 154 (59.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 61/243 (25%), Positives = 108/243 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKII-GVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
GHE+ V +A G LAT S D S+ I ++ LA L H V V W HP
Sbjct: 376 GHENEVKCIAWSCNGNYLATCSRDKSVWIWEATEDDEFDCLAVLQEHTQDVKVVTW-HPT 434
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
+L S S+D ++ W++ + ++W + H ++V ++ ++P+ G LA +DGN
Sbjct: 435 -EDLLVSGSYDNSICFWRD-DGDDWALTCQLQGHTNTVWALAFSPN--GNTLASADNDGN 490
Query: 128 ISVFTARADGGWDTSRIDQAHPVG-VTSVSWAPSTA-P----GALVGSGFLDPVQKLCSG 181
+ ++ + D + ID + + W T+ P GA+ +++ LCS
Sbjct: 491 VFLWI-KISSNEDVATIDSTNILRPALQEEWKQQTSLPHIHKGAVYTISWMNDAT-LCSA 548
Query: 182 GCDNTVKVW---KLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVI 238
G D + V+ K +W + + Q H V ++ L + S +DG+
Sbjct: 549 GGDGKIVVYQREKHDEALWHV-AYE--QDHAHGVYEINSLEYLR--DDRLLSGGDDGECR 603
Query: 239 IWT 241
+W+
Sbjct: 604 VWS 606
Score = 145 (56.1 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 68/250 (27%), Positives = 111/250 (44%)
Query: 26 LATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85
LA AS D + I ++ + A L GH+ V +AW+ G+ LA+CS D +V IW+
Sbjct: 349 LAVASFDSVVSINEKIDDDWECTAALEGHENEVKCIAWSCN--GNYLATCSRDKSVWIWE 406
Query: 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGG-WDTSRI 144
+E+ V ++H V + W P E L L GS D +I + R DG W +
Sbjct: 407 ATEDDEFDCLAVLQEHTQDVKVVTWHPTE-DL-LVSGSYDNSICFW--RDDGDDWALTCQ 462
Query: 145 DQAHPVGVTSVSWAPS--TAPGA-LVGSGFLDPVQKLCSGG----CDNTVKVWKLYNGIW 197
Q H V +++++P+ T A G+ FL K+ S D+T + W
Sbjct: 463 LQGHTNTVWALAFSPNGNTLASADNDGNVFL--WIKISSNEDVATIDSTNILRPALQEEW 520
Query: 198 KMDC-FPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQ-WEGKVLH 255
K P +H V ++W + +T+ SA DGK++++ + + W
Sbjct: 521 KQQTSLP--HIHKGAVYTISW-----MNDATLCSAGGDGKIVVYQREKHDEALWHVAYEQ 573
Query: 256 DFKTPVYRVS 265
D VY ++
Sbjct: 574 DHAHGVYEIN 583
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/152 (26%), Positives = 72/152 (47%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
T + VH + K+ + ++++ ++ G + + +SGH G +W VA AHP
Sbjct: 245 TPDSNIVHLYSKTEMSKKFSFITNEFLNQLYGPRKLDT--ITTISGHTGRLWSVA-AHPM 301
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCLACGSSDG 126
+ A+ S D +V I+ NSN + HV + H S+ + W P E + LA S D
Sbjct: 302 L-PLFATSSQDKSVRIY---NSNTYNLVHVIDGFHTRSIRRVAWRPIERPV-LAVASFDS 356
Query: 127 NISVFTARADGGWDTSRIDQAHPVGVTSVSWA 158
+S+ + D W+ + + H V ++W+
Sbjct: 357 VVSI-NEKIDDDWECTAALEGHENEVKCIAWS 387
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 181 (68.8 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 84/292 (28%), Positives = 122/292 (41%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH T+ VA G LA+ S D +I I + + +A L GH+ V V W+
Sbjct: 43 GHTRTIRSVAWSPCGNYLASCSFDATICIWSKKDGDFECMATLEGHENEVKCVNWSSS-- 100
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIK-DHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G LASCS D + IW+ +E + V DH V + W+P E L A S D
Sbjct: 101 GVYLASCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVKHVVWSPKENALVSA--SYDNT 158
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTV 187
I ++ D W+ S H V S+S+ S G F+ C G D +
Sbjct: 159 IKIYK-EVDDDWECSHTLIGHESTVWSLSFHSS-------GELFVS-----C--GDDKVL 203
Query: 188 KVWK-LYNGI----WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV 242
K+WK L +G W C A H + DV W+ L + IA+A D + I+++
Sbjct: 204 KIWKCLKSGPSDVKWISICTIA-GYHNRPIYDVDWS-KLN---NKIATACGDDAIRIFSI 258
Query: 243 AREGDQWEGKVL-------HDFKTPVYRVSWS-LTGNILAVADGNNNVTLWE 286
R ++L H+ V R W NILA +N + +W+
Sbjct: 259 VRITISISNQLLFIAYYQAHNHDVNVVR--WHPKVDNILASGSDDNCIKIWK 308
Score = 137 (53.3 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 54/197 (27%), Positives = 81/197 (41%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
T H V V L +AS D +IKI ++ + L GH+ VW +++ H
Sbjct: 132 TDHSQDVKHVVWSPKENALVSASYDNTIKIYKEVDDDWECSHTLIGHESTVWSLSF-HSS 190
Query: 68 FGSILASCSFDGTVIIWK---EGNSN-EWIKDHVFED-HKSSVNSIDWAPHELGLCLACG 122
G + SC D + IWK G S+ +WI H + +DW+ + ACG
Sbjct: 191 -GELFVSCGDDKVLKIWKCLKSGPSDVKWISICTIAGYHNRPIYDVDWSKLNNKIATACG 249
Query: 123 SSDGNISVFT-ARADGGWDTSRID----QAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK 177
D I +F+ R + QAH V V W P +D +
Sbjct: 250 --DDAIRIFSIVRITISISNQLLFIAYYQAHNHDVNVVRWHPK-----------VDNI-- 294
Query: 178 LCSGGCDNTVKVWKLYN 194
L SG DN +K+WK+++
Sbjct: 295 LASGSDDNCIKIWKVHS 311
Score = 125 (49.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 60/238 (25%), Positives = 99/238 (41%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQH--LAKLSGHKGAVWEVAWAHP 66
GHE+ V V G LA+ S D S I ++ + L+ H V V W+ P
Sbjct: 87 GHENEVKCVNWSSSGVYLASCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVKHVVWS-P 145
Query: 67 KFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELG-LCLACGSSD 125
K + L S S+D T+ I+KE + ++W H H+S+V S+ + H G L ++CG D
Sbjct: 146 KENA-LVSASYDNTIKIYKEVD-DDWECSHTLIGHESTVWSLSF--HSSGELFVSCGD-D 200
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDN 185
+ ++ G D I + +++ + + S + + C
Sbjct: 201 KVLKIWKCLKSGPSDVKWIS------ICTIAGYHNRPIYDVDWSKLNNKIATACGDDAIR 254
Query: 186 TVKVWKLYNGIWKMDCFPAL-QMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV 242
+ ++ I F A Q H V V W P + + +AS S+D + IW V
Sbjct: 255 IFSIVRITISISNQLLFIAYYQAHNHDVNVVRWHPKVD---NILASGSDDNCIKIWKV 309
Score = 117 (46.2 bits), Expect = 0.00018, P = 0.00018
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
L S D T+ +W +G +C L+ H + V+ V W+ + G+ +AS S D
Sbjct: 60 LASCSFDATICIWSKKDG--DFECMATLEGHENEVKCVNWSSS-GV---YLASCSRDKSA 113
Query: 238 IIWTVAREGDQWE-GKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287
IW E +++E VL D V V WS N L A +N + +++E
Sbjct: 114 WIWEFIEEDEEYECASVLTDHSQDVKHVVWSPKENALVSASYDNTIKIYKE 164
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 134 (52.2 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 45/133 (33%), Positives = 63/133 (47%)
Query: 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVA 62
P + +GHE V+ G LA+A D I + V + + A L GH GAV E+
Sbjct: 59 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNY-ATLKGHSGAVMELH 117
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLAC- 121
+ GS+L S S D TV +W + + E +K + H S VNS P G L C
Sbjct: 118 YNTD--GSMLFSASTDKTVAVW-DSETGERVKR--LKGHTSFVNSC--YPARRGPQLVCT 170
Query: 122 GSSDGNISVFTAR 134
GS DG + ++ R
Sbjct: 171 GSDDGTVKLWDIR 183
Score = 93 (37.8 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 33/121 (27%), Positives = 55/121 (45%)
Query: 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
F D ++ SGG DN +KVW L K+ ++ H D V ++ L S + S
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQN--KLTY--TMRGHADSVTGLS----LSSEGSYLLS 253
Query: 231 ASEDGKVIIWTVAREGDQ------WEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTL 284
+ D V +W V + ++G V H+F+ + R SWS G+ +A ++ +
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVKIFQGNV-HNFEKNLLRCSWSPDGSKIAAGSADSFLYP 312
Query: 285 W 285
W
Sbjct: 313 W 313
Score = 82 (33.9 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 36/129 (27%), Positives = 58/129 (44%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-GNSNEWIKDHVFEDHKSSVNSID 109
LSGH+G V+ + HP GS LAS FD +++W G+ + + + H +V +
Sbjct: 63 LSGHEGEVYCCKF-HPN-GSTLASAGFDRLILLWSVYGDCDNYA---TLKGHSGAVMELH 117
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 169
+ G L S+D ++V+ + G R+ + H V S P+ LV +
Sbjct: 118 YNTD--GSMLFSASTDKTVAVWDSET--GERVKRL-KGHTSFVNSCY--PARRGPQLVCT 170
Query: 170 GFLDPVQKL 178
G D KL
Sbjct: 171 GSDDGTVKL 179
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 183 (69.5 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 69/238 (28%), Positives = 107/238 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D+V D++ D GK LA+ S+D +IK+ + + + GH V VA P
Sbjct: 148 GHTDSVQDISFDQTGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G + S S D T+ +W E + +K F H+ V + P++ G LA S+D +
Sbjct: 204 GDHIVSASRDKTMKMW-EVATGYCVK--TFTGHREWVRMV--RPNQDGTLLASCSNDQTV 258
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTA-PGALVGSGFLD-----PVQKLCSGG 182
V+ + + H V +SWAP +A P +G + P L SG
Sbjct: 259 RVWVVATK---ECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGS 315
Query: 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
D T+K+W + G+ C L H +WVR V + P G + S ++D + IW
Sbjct: 316 RDKTIKMWDISTGM----CLMTLVGHDNWVRGVLFHPG-G---RFVVSCADDKTLRIW 365
Score = 93 (37.8 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 32/113 (28%), Positives = 54/113 (47%)
Query: 2 PPQKIE-TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
PP+K +GH V V + +AS D +IK+ + K GH +V +
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLK--GHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPH 113
+++ + G +LASCS D T+ +W + E I+ DH +V+S+ P+
Sbjct: 156 ISF--DQTGKLLASCSADMTIKLW-DFQGFECIRTMHGHDH--NVSSVAIMPN 203
Score = 84 (34.6 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 27/90 (30%), Positives = 42/90 (46%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ S D T+K+W++ G C H +WVR V PN + +AS S D V
Sbjct: 207 IVSASRDKTMKMWEVATGY----CVKTFTGHREWVRMVR--PNQD--GTLLASCSNDQTV 258
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWS 267
+W VA + + E L + + V +SW+
Sbjct: 259 RVWVVATKECKAE---LREHEHVVECISWA 285
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 183 (69.5 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 86/305 (28%), Positives = 133/305 (43%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAW 63
Q +E GH D + V G+ LA+ S+D +IK+ + + L GH +V VA+
Sbjct: 35 QTLE-GHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQT--LEGHSSSVQSVAF 91
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+ P G +LAS S D T+ +W + + +K H E H V S+ ++P+ A GS
Sbjct: 92 S-PN-GQLLASGSSDTTIKLWNSASDS--LK-HTMEGHSDRVESVAFSPNGQLWNPAIGS 146
Query: 124 --------SDGNISV-FTAR----ADGG-------WDTSRIDQAHPVGVTSVSWAPSTAP 163
SD +SV F+ A G WD++ H +G S +W P
Sbjct: 147 LKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHS-NWV---LP 202
Query: 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGL 223
G L L SG D T+K+W +G K L+ H++ + +A++PN L
Sbjct: 203 LVFSPDGRL-----LASGSNDATIKLWDPPSGSLKH----TLEGHSNKIESLAFSPNGQL 253
Query: 224 PKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVT 283
+AS S D + +W A + K D V V +S +L G+N +
Sbjct: 254 ----LASGSSDATIKLWDTATGSFRHTLKGHSDM---VLSVVFSPDSQLLESGSGDNTIK 306
Query: 284 LWEEA 288
LW+ A
Sbjct: 307 LWDPA 311
Score = 122 (48.0 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 75/298 (25%), Positives = 120/298 (40%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAW 63
Q +E GH +V VA G+ LA+ SSD +IK+ +++ +H + GH V VA+
Sbjct: 77 QTLE-GHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHT--MEGHSDRVESVAF 133
Query: 64 AHPKFGSIL--ASCSFDGTVIIWKEGNSNEWIKDHVFE-DHK-----SSVNSID-WAPHE 114
+ P G + A S T+ EG+S +W+ F D + S+ +I W
Sbjct: 134 S-PN-GQLWNPAIGSLKHTI----EGHS-DWVLSVAFSPDGQLLASGSAEKTIKLWDSAT 186
Query: 115 LGLCLACGSSDGNISVFTARADG-----GWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 169
GL G + DG G + + I P S+ +
Sbjct: 187 CGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPS-GSLKHTLEGHSNKIESL 245
Query: 170 GFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIA 229
F Q L SG D T+K+W G ++ L+ H+D V V ++P+ L +
Sbjct: 246 AFSPNGQLLASGSSDATIKLWDTATGSFRH----TLKGHSDMVLSVVFSPDSQL----LE 297
Query: 230 SASEDGKVIIWTVAREGDQWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLW 285
S S D + +W D G + H +TP V + +S+ L G ++ W
Sbjct: 298 SGSGDNTIKLW------DPATGILKHSMRTPGIVRSIEFSIELPQLITNLGTFSIQAW 349
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 113 (44.8 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
F D K+ +GG DN VKVW L G M L+ H D + ++ +P+ G S + +
Sbjct: 188 FSDAADKIFTGGVDNDVKVWDLRKGEATM----TLEGHQDTITGMSLSPD-G---SYLLT 239
Query: 231 ASEDGKVIIWTVAREGDQ------WEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTL 284
D K+ +W + Q +EG H+F+ + + SWS G + + V +
Sbjct: 240 NGMDNKLCVWDMRPYAPQNRCVKIFEGHQ-HNFEKNLLKCSWSPDGTKVTAGSSDRMVHI 298
Query: 285 WE 286
W+
Sbjct: 299 WD 300
Score = 113 (44.8 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 41/140 (29%), Positives = 61/140 (43%)
Query: 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVA 62
P + +GH V+ + + G +A+ S D I + V + + L GHK A+ ++
Sbjct: 45 PIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMV-LKGHKNAILDLH 103
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLAC- 121
W GS + S S D TV W + + + IK +H S VNS P G L
Sbjct: 104 WTSD--GSQIVSASPDKTVRAW-DVETGKQIKK--MAEHSSFVNSC--CPTRRGPPLIIS 156
Query: 122 GSSDGNISVFTARADGGWDT 141
GS DG ++ R G T
Sbjct: 157 GSDDGTAKLWDMRQRGAIQT 176
Score = 78 (32.5 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 32/129 (24%), Positives = 58/129 (44%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK-EGNSNEWIKDHVFEDHKSSVNSID 109
LSGH AV+ + + +P G+++AS S D + +W+ G+ ++ V + HK+++ +
Sbjct: 49 LSGHPSAVYTMKF-NPA-GTLIASGSHDREIFLWRVHGDCKNFM---VLKGHKNAILDLH 103
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 169
W G + S D + + G ++ + H V S P+ L+ S
Sbjct: 104 WTSD--GSQIVSASPDKTVRAWDVET--GKQIKKMAE-HSSFVNSC--CPTRRGPPLIIS 156
Query: 170 GFLDPVQKL 178
G D KL
Sbjct: 157 GSDDGTAKL 165
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 176 (67.0 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 66/238 (27%), Positives = 107/238 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D+V D++ D+ GK LA+ S+D +IK+ + + + GH V VA P
Sbjct: 83 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVA-IMPN- 138
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G + S S D T+ +W E + +K F H+ V + P++ G +A S+D +
Sbjct: 139 GDHIVSASRDKTIKMW-EVQTGYCVK--TFTGHREWVRMV--RPNQDGTLIASCSNDQTV 193
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL---VGSGFLD---PVQKLCSGG 182
V+ + + H V +SWAP ++ ++ GS P L SG
Sbjct: 194 RVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 250
Query: 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
D T+K+W + G+ C L H +WVR V + G I S ++D + +W
Sbjct: 251 RDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 300
Score = 121 (47.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 67/259 (25%), Positives = 104/259 (40%)
Query: 2 PPQKIE-TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
PP+K +GH V V + +AS D +IK+ T L GH +V +
Sbjct: 33 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY--ETGDFERTLKGHTDSVQD 90
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA 120
+++ H G +LASCS D T+ +W + E I+ DH +V+S+ P+ G +
Sbjct: 91 ISFDHS--GKLLASCSADMTIKLW-DFQGFECIRTMHGHDH--NVSSVAIMPN--GDHIV 143
Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
S D I ++ + G+ H V V P+ G L+ S CS
Sbjct: 144 SASRDKTIKMWEVQT--GYCVKTFT-GHREWVRMVR--PNQ-DGTLIAS---------CS 188
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL----------------GLP 224
D TV+VW + +C L+ H V ++WAP G P
Sbjct: 189 N--DQTVRVWVVAT----KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKP 242
Query: 225 KSTIASASEDGKVIIWTVA 243
+ S S D + +W V+
Sbjct: 243 GPFLLSGSRDKTIKMWDVS 261
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 143 (55.4 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 47/152 (30%), Positives = 66/152 (43%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH + V VA GK LA+ S D +++ + T Q AK GH+ V +AW+ P
Sbjct: 125 GHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAK--GHRHWVLSIAWS-PD- 180
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP-HELGLC--LACGSSD 125
G LAS + + +W N+ V H + + W P H C LA S D
Sbjct: 181 GKKLASGCKNSQIFLWDPATGNQI--GRVLTGHSKWITCLCWEPLHINPECRYLASASKD 238
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSW 157
G+I ++ G D +I H VT V W
Sbjct: 239 GSIRIWDTLM-GRCD--KILTGHTQSVTCVKW 267
Score = 128 (50.1 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 37/123 (30%), Positives = 60/123 (48%)
Query: 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVA 62
P + TGH+ ++ V + +A+AS D SIK+ T ++L L GH AV+++A
Sbjct: 377 PLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWE--GRTGKYLTSLRGHVSAVYQIA 434
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACG 122
W+ +L S S D T+ +W + + + D H V + DW+P G +A G
Sbjct: 435 WSADS--RLLVSGSSDSTLKVW-DAETKKLAID--LPGHADEVFATDWSPD--GQRVASG 487
Query: 123 SSD 125
D
Sbjct: 488 GKD 490
Score = 93 (37.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 44/159 (27%), Positives = 65/159 (40%)
Query: 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAK-LSGHKGAV--- 58
PQ GH V +A GK+LA+ + I + T + + L+GH +
Sbjct: 161 PQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPA--TGNQIGRVLTGHSKWITCL 218
Query: 59 -WEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGL 117
WE +P+ LAS S DG++ IW D + H SV + W GL
Sbjct: 219 CWEPLHINPEC-RYLASASKDGSIRIWDTLMGR---CDKILTGHTQSVTCVKWGGD--GL 272
Query: 118 CLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVS 156
L S D I V+ ++ DG + AH V ++S
Sbjct: 273 -LYSSSQDRTIKVWRSQ-DGILCRTLQGHAHWVNTMALS 309
Score = 80 (33.2 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 28/113 (24%), Positives = 51/113 (45%)
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQM--HTDWVRDVAWAPNLGLPKSTIASASE 233
++L SG D T+ +W+ D P +M H + V ++P+ + IASAS
Sbjct: 355 ERLVSGSDDFTLFLWRPAE-----DKKPLERMTGHQALINQVLFSPDTRI----IASASF 405
Query: 234 DGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
D + +W R G L + VY+++WS +L ++ + +W+
Sbjct: 406 DKSIKLWE-GRTGKYLTS--LRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWD 455
Score = 45 (20.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 176 QKLCSGGCDNTVKVWK 191
Q++ SGG D +++W+
Sbjct: 482 QRVASGGKDKCLRIWR 497
>UNIPROTKB|A4R7U3 [details] [associations]
symbol:CIA1 "Probable cytosolic iron-sulfur protein
assembly protein 1" species:242507 "Magnaporthe oryzae 70-15"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CM001234 OrthoDB:EOG4CVKH5 RefSeq:XP_003716845.1
ProteinModelPortal:A4R7U3 STRING:A4R7U3 GeneID:2676736
KEGG:mgr:MGG_03150 Uniprot:A4R7U3
Length = 446
Score = 153 (58.9 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 49/144 (34%), Positives = 66/144 (45%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKI---IGV--GNNTSQHLAKLSGHKGAVWEVAW 63
GHE+ + A G+ LAT S D SI I +G G++ + +A L+ H G V VAW
Sbjct: 143 GHENEIKSAAFSPSGQYLATCSRDKSIWIWEDVGANEGDDEWETVAVLTEHDGDVKCVAW 202
Query: 64 AHPKFG--------SILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHEL 115
G +LAS S+D T+ IW+E EW V E H S+V + W P
Sbjct: 203 CPDVPGRNISSYSPDVLASASYDDTIRIWREDGDGEWACVAVLEGHSSTVWGVQWEPKVD 262
Query: 116 GLC---LACGSSDGNISVFTARAD 136
L S+D I V+T D
Sbjct: 263 NTKFPRLISWSADKTIRVWTLEQD 286
Score = 150 (57.9 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 44/163 (26%), Positives = 74/163 (45%)
Query: 88 NSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVF----TARADGGWDTSR 143
N ++W V E H++ + S ++P G LA S D +I ++ D W+T
Sbjct: 131 NDDDWEFTLVLEGHENEIKSAAFSPS--GQYLATCSRDKSIWIWEDVGANEGDDEWETVA 188
Query: 144 IDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFP 203
+ H V V+W P PG + S P L S D+T+++W+ +G + C
Sbjct: 189 VLTEHDGDVKCVAWCPDV-PGRNISS--YSP-DVLASASYDDTIRIWR-EDGDGEWACVA 243
Query: 204 ALQMHTDWVRDVAWAPNLGLPK-STIASASEDGKVIIWTVARE 245
L+ H+ V V W P + K + S S D + +WT+ ++
Sbjct: 244 VLEGHSSTVWGVQWEPKVDNTKFPRLISWSADKTIRVWTLEQD 286
Score = 135 (52.6 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 44/154 (28%), Positives = 64/154 (41%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNE----WIKDHVFEDHKSSVN 106
L GH+ + A++ P G LA+CS D ++ IW++ +NE W V +H V
Sbjct: 141 LEGHENEIKSAAFS-PS-GQYLATCSRDKSIWIWEDVGANEGDDEWETVAVLTEHDGDVK 198
Query: 107 SIDWAPHELGL--------CLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWA 158
+ W P G LA S D I ++ DG W + + H V V W
Sbjct: 199 CVAWCPDVPGRNISSYSPDVLASASYDDTIRIWREDGDGEWACVAVLEGHSSTVWGVQWE 258
Query: 159 PSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKL 192
P + F P +L S D T++VW L
Sbjct: 259 PKVD-----NTKF--P--RLISWSADKTIRVWTL 283
Score = 55 (24.4 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 19/66 (28%), Positives = 30/66 (45%)
Query: 26 LATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH--PKFGSILASCSFDGTVII 83
+ATA + S+ + + + S H GH +V W P L + SFD T +
Sbjct: 38 IATAH-EKSVTVFSL-STLSAHSNLTGGHTRSVRCAVWKPNLPSGKLCLVTASFDSTAGL 95
Query: 84 WK-EGN 88
W+ EG+
Sbjct: 96 WRWEGD 101
Score = 48 (22.0 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 247 DQWE-GKVLHDFKT-PVYRVSWSLTGNILAV-ADGNNNVTLWEE 287
++W VL T +Y SWS G + + +DG+ + ++EE
Sbjct: 319 EEWRCSAVLPSVHTRDIYSASWSKNGRVASTGSDGS--ILVYEE 360
Score = 46 (21.3 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 15/74 (20%), Positives = 30/74 (40%)
Query: 125 DGNISVFTARADGGWDT-SRIDQAH-PVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGG 182
+G+ +V + W ++ H P + ++W G V ++ + L + G
Sbjct: 375 EGDSNVIVKPGEAKWKVLGKVSDGHGPYEINHITWCSRYDAG--VEQRGVE--EMLVTTG 430
Query: 183 CDNTVKVWKLYNGI 196
D V+ W+L I
Sbjct: 431 DDGIVQAWQLKESI 444
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 176 (67.0 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 66/238 (27%), Positives = 106/238 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D+V D++ D+ GK LA+ S+D +IK+ + + + GH V VA P
Sbjct: 148 GHTDSVQDISFDHTGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G + S S D T+ +W E + +K F H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMW-EVQTGYCVK--TFTGHREWVRMV--RPNQDGTLIASCSNDQTV 258
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL---VGSGFLD---PVQKLCSGG 182
V+ + + H V +SWAP ++ + GS P L SG
Sbjct: 259 RVWVVATK---ECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGS 315
Query: 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
D T+K+W + G+ C L H +WVR V + G I S ++D + +W
Sbjct: 316 RDKTIKMWDISTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 106 (42.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 38/131 (29%), Positives = 61/131 (46%)
Query: 2 PPQKIE-TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
PP+K +GH V V + +AS D +IK+ T L GH +V +
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY--ETGDFERTLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA 120
+++ H G +LASCS D T+ +W + E I+ DH +V+S+ P+ G +
Sbjct: 156 ISFDHT--GKLLASCSADMTIKLW-DFQGFECIRTMHGHDH--NVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVF 131
S D I ++
Sbjct: 209 SASRDKTIKMW 219
Score = 97 (39.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDW 110
LSGH+ V V + HP F S++ S S D T+ +W + + ++ + + H SV I +
Sbjct: 104 LSGHRSPVTRVIF-HPVF-SVMVSASEDATIKVW-DYETGDF--ERTLKGHTDSVQDISF 158
Query: 111 APHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
H G LA S+D I ++ + G++ R H V+SV+ P+
Sbjct: 159 -DHT-GKLLASCSADMTIKLWDFQ---GFECIRTMHGHDHNVSSVAIMPN 203
Score = 93 (37.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 29/106 (27%), Positives = 48/106 (45%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ S D T+K+W++ G C H +WVR V PN + IAS S D V
Sbjct: 207 IVSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVR--PNQD--GTLIASCSNDQTV 258
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVT 283
+W VA + + E L + + V +SW+ + +++ + T
Sbjct: 259 RVWVVATKECKAE---LREHEHVVECISWAPESSYSTISEATGSET 301
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 176 (67.0 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 66/238 (27%), Positives = 107/238 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D+V D++ D+ GK LA+ S+D +IK+ + + + GH V VA P
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G + S S D T+ +W E + +K F H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMW-EVQTGYCVK--TFTGHREWVRMV--RPNQDGTLIASCSNDQTV 258
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL---VGSGFLD---PVQKLCSGG 182
V+ + + H V +SWAP ++ ++ GS P L SG
Sbjct: 259 RVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
D T+K+W + G+ C L H +WVR V + G I S ++D + +W
Sbjct: 316 RDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 67/259 (25%), Positives = 104/259 (40%)
Query: 2 PPQKIE-TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
PP+K +GH V V + +AS D +IK+ T L GH +V +
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY--ETGDFERTLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA 120
+++ H G +LASCS D T+ +W + E I+ DH +V+S+ P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW-DFQGFECIRTMHGHDH--NVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
S D I ++ + G+ H V V P+ G L+ S CS
Sbjct: 209 SASRDKTIKMWEVQT--GYCVKTFT-GHREWVRMVR--PNQ-DGTLIAS---------CS 253
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL----------------GLP 224
D TV+VW + +C L+ H V ++WAP G P
Sbjct: 254 N--DQTVRVWVVAT----KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKP 307
Query: 225 KSTIASASEDGKVIIWTVA 243
+ S S D + +W V+
Sbjct: 308 GPFLLSGSRDKTIKMWDVS 326
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 176 (67.0 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 66/238 (27%), Positives = 107/238 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D+V D++ D+ GK LA+ S+D +IK+ + + + GH V VA P
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G + S S D T+ +W E + +K F H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMW-EVQTGYCVK--TFTGHREWVRMV--RPNQDGTLIASCSNDQTV 258
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL---VGSGFLD---PVQKLCSGG 182
V+ + + H V +SWAP ++ ++ GS P L SG
Sbjct: 259 RVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
D T+K+W + G+ C L H +WVR V + G I S ++D + +W
Sbjct: 316 RDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 67/259 (25%), Positives = 104/259 (40%)
Query: 2 PPQKIE-TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
PP+K +GH V V + +AS D +IK+ T L GH +V +
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY--ETGDFERTLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA 120
+++ H G +LASCS D T+ +W + E I+ DH +V+S+ P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW-DFQGFECIRTMHGHDH--NVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
S D I ++ + G+ H V V P+ G L+ S CS
Sbjct: 209 SASRDKTIKMWEVQT--GYCVKTFT-GHREWVRMVR--PNQ-DGTLIAS---------CS 253
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL----------------GLP 224
D TV+VW + +C L+ H V ++WAP G P
Sbjct: 254 N--DQTVRVWVVAT----KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKP 307
Query: 225 KSTIASASEDGKVIIWTVA 243
+ S S D + +W V+
Sbjct: 308 GPFLLSGSRDKTIKMWDVS 326
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 176 (67.0 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 66/238 (27%), Positives = 107/238 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D+V D++ D+ GK LA+ S+D +IK+ + + + GH V VA P
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G + S S D T+ +W E + +K F H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMW-EVQTGYCVK--TFTGHREWVRMV--RPNQDGTLIASCSNDQTV 258
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL---VGSGFLD---PVQKLCSGG 182
V+ + + H V +SWAP ++ ++ GS P L SG
Sbjct: 259 RVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
D T+K+W + G+ C L H +WVR V + G I S ++D + +W
Sbjct: 316 RDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 67/259 (25%), Positives = 104/259 (40%)
Query: 2 PPQKIE-TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
PP+K +GH V V + +AS D +IK+ T L GH +V +
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY--ETGDFERTLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA 120
+++ H G +LASCS D T+ +W + E I+ DH +V+S+ P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW-DFQGFECIRTMHGHDH--NVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
S D I ++ + G+ H V V P+ G L+ S CS
Sbjct: 209 SASRDKTIKMWEVQT--GYCVKTFT-GHREWVRMVR--PNQ-DGTLIAS---------CS 253
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL----------------GLP 224
D TV+VW + +C L+ H V ++WAP G P
Sbjct: 254 N--DQTVRVWVVAT----KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKP 307
Query: 225 KSTIASASEDGKVIIWTVA 243
+ S S D + +W V+
Sbjct: 308 GPFLLSGSRDKTIKMWDVS 326
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 176 (67.0 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 66/238 (27%), Positives = 107/238 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D+V D++ D+ GK LA+ S+D +IK+ + + + GH V VA P
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G + S S D T+ +W E + +K F H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMW-EVQTGYCVK--TFTGHREWVRMV--RPNQDGTLIASCSNDQTV 258
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL---VGSGFLD---PVQKLCSGG 182
V+ + + H V +SWAP ++ ++ GS P L SG
Sbjct: 259 RVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
D T+K+W + G+ C L H +WVR V + G I S ++D + +W
Sbjct: 316 RDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 67/259 (25%), Positives = 104/259 (40%)
Query: 2 PPQKIE-TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
PP+K +GH V V + +AS D +IK+ T L GH +V +
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY--ETGDFERTLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA 120
+++ H G +LASCS D T+ +W + E I+ DH +V+S+ P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW-DFQGFECIRTMHGHDH--NVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
S D I ++ + G+ H V V P+ G L+ S CS
Sbjct: 209 SASRDKTIKMWEVQT--GYCVKTFT-GHREWVRMVR--PNQ-DGTLIAS---------CS 253
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL----------------GLP 224
D TV+VW + +C L+ H V ++WAP G P
Sbjct: 254 N--DQTVRVWVVAT----KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKP 307
Query: 225 KSTIASASEDGKVIIWTVA 243
+ S S D + +W V+
Sbjct: 308 GPFLLSGSRDKTIKMWDVS 326
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 176 (67.0 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 66/238 (27%), Positives = 107/238 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D+V D++ D+ GK LA+ S+D +IK+ + + + GH V VA P
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G + S S D T+ +W E + +K F H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMW-EVQTGYCVK--TFTGHREWVRMV--RPNQDGTLIASCSNDQTV 258
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL---VGSGFLD---PVQKLCSGG 182
V+ + + H V +SWAP ++ ++ GS P L SG
Sbjct: 259 RVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
D T+K+W + G+ C L H +WVR V + G I S ++D + +W
Sbjct: 316 RDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 67/259 (25%), Positives = 104/259 (40%)
Query: 2 PPQKIE-TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
PP+K +GH V V + +AS D +IK+ T L GH +V +
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY--ETGDFERTLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA 120
+++ H G +LASCS D T+ +W + E I+ DH +V+S+ P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW-DFQGFECIRTMHGHDH--NVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
S D I ++ + G+ H V V P+ G L+ S CS
Sbjct: 209 SASRDKTIKMWEVQT--GYCVKTFT-GHREWVRMVR--PNQ-DGTLIAS---------CS 253
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL----------------GLP 224
D TV+VW + +C L+ H V ++WAP G P
Sbjct: 254 N--DQTVRVWVVAT----KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKP 307
Query: 225 KSTIASASEDGKVIIWTVA 243
+ S S D + +W V+
Sbjct: 308 GPFLLSGSRDKTIKMWDVS 326
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 176 (67.0 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 66/238 (27%), Positives = 107/238 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D+V D++ D+ GK LA+ S+D +IK+ + + + GH V VA P
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G + S S D T+ +W E + +K F H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMW-EVQTGYCVK--TFTGHREWVRMV--RPNQDGTLIASCSNDQTV 258
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL---VGSGFLD---PVQKLCSGG 182
V+ + + H V +SWAP ++ ++ GS P L SG
Sbjct: 259 RVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
D T+K+W + G+ C L H +WVR V + G I S ++D + +W
Sbjct: 316 RDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 67/259 (25%), Positives = 104/259 (40%)
Query: 2 PPQKIE-TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
PP+K +GH V V + +AS D +IK+ T L GH +V +
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY--ETGDFERTLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA 120
+++ H G +LASCS D T+ +W + E I+ DH +V+S+ P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW-DFQGFECIRTMHGHDH--NVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
S D I ++ + G+ H V V P+ G L+ S CS
Sbjct: 209 SASRDKTIKMWEVQT--GYCVKTFT-GHREWVRMVR--PNQ-DGTLIAS---------CS 253
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL----------------GLP 224
D TV+VW + +C L+ H V ++WAP G P
Sbjct: 254 N--DQTVRVWVVAT----KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKP 307
Query: 225 KSTIASASEDGKVIIWTVA 243
+ S S D + +W V+
Sbjct: 308 GPFLLSGSRDKTIKMWDVS 326
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 176 (67.0 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 66/238 (27%), Positives = 107/238 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D+V D++ D+ GK LA+ S+D +IK+ + + + GH V VA P
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G + S S D T+ +W E + +K F H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMW-EVQTGYCVK--TFTGHREWVRMV--RPNQDGTLIASCSNDQTV 258
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL---VGSGFLD---PVQKLCSGG 182
V+ + + H V +SWAP ++ ++ GS P L SG
Sbjct: 259 RVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
D T+K+W + G+ C L H +WVR V + G I S ++D + +W
Sbjct: 316 RDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 67/259 (25%), Positives = 104/259 (40%)
Query: 2 PPQKIE-TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
PP+K +GH V V + +AS D +IK+ T L GH +V +
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY--ETGDFERTLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA 120
+++ H G +LASCS D T+ +W + E I+ DH +V+S+ P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW-DFQGFECIRTMHGHDH--NVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
S D I ++ + G+ H V V P+ G L+ S CS
Sbjct: 209 SASRDKTIKMWEVQT--GYCVKTFT-GHREWVRMVR--PNQ-DGTLIAS---------CS 253
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL----------------GLP 224
D TV+VW + +C L+ H V ++WAP G P
Sbjct: 254 N--DQTVRVWVVAT----KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKP 307
Query: 225 KSTIASASEDGKVIIWTVA 243
+ S S D + +W V+
Sbjct: 308 GPFLLSGSRDKTIKMWDVS 326
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 176 (67.0 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 66/238 (27%), Positives = 107/238 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D+V D++ D+ GK LA+ S+D +IK+ + + + GH V VA P
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G + S S D T+ +W E + +K F H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMW-EVQTGYCVK--TFTGHREWVRMV--RPNQDGTLIASCSNDQTV 258
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL---VGSGFLD---PVQKLCSGG 182
V+ + + H V +SWAP ++ ++ GS P L SG
Sbjct: 259 RVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
D T+K+W + G+ C L H +WVR V + G I S ++D + +W
Sbjct: 316 RDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 67/259 (25%), Positives = 104/259 (40%)
Query: 2 PPQKIE-TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
PP+K +GH V V + +AS D +IK+ T L GH +V +
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY--ETGDFERTLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA 120
+++ H G +LASCS D T+ +W + E I+ DH +V+S+ P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW-DFQGFECIRTMHGHDH--NVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
S D I ++ + G+ H V V P+ G L+ S CS
Sbjct: 209 SASRDKTIKMWEVQT--GYCVKTFT-GHREWVRMVR--PNQ-DGTLIAS---------CS 253
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL----------------GLP 224
D TV+VW + +C L+ H V ++WAP G P
Sbjct: 254 N--DQTVRVWVVAT----KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKP 307
Query: 225 KSTIASASEDGKVIIWTVA 243
+ S S D + +W V+
Sbjct: 308 GPFLLSGSRDKTIKMWDVS 326
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 176 (67.0 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 66/238 (27%), Positives = 107/238 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D+V D++ D+ GK LA+ S+D +IK+ + + + GH V VA P
Sbjct: 148 GHTDSVEDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G + S S D T+ +W E + +K F H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSASRDKTIKMW-EVQTGYCVK--TFTGHREWVRMV--RPNQDGTLIASCSNDQTV 258
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL---VGSGFLD---PVQKLCSGG 182
V+ + + H V +SWAP ++ ++ GS P L SG
Sbjct: 259 RVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
D T+K+W + G+ C L H +WVR V + G I S ++D + +W
Sbjct: 316 RDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 67/259 (25%), Positives = 104/259 (40%)
Query: 2 PPQKIE-TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
PP+K +GH V V + +AS D +IK+ T L GH +V +
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY--ETGDFERTLKGHTDSVED 155
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA 120
+++ H G +LASCS D T+ +W + E I+ DH +V+S+ P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW-DFQGFECIRTMHGHDH--NVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
S D I ++ + G+ H V V P+ G L+ S CS
Sbjct: 209 SASRDKTIKMWEVQT--GYCVKTFT-GHREWVRMVR--PNQ-DGTLIAS---------CS 253
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL----------------GLP 224
D TV+VW + +C L+ H V ++WAP G P
Sbjct: 254 N--DQTVRVWVVAT----KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKP 307
Query: 225 KSTIASASEDGKVIIWTVA 243
+ S S D + +W V+
Sbjct: 308 GPFLLSGSRDKTIKMWDVS 326
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 139 (54.0 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 43/152 (28%), Positives = 66/152 (43%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH + V VA GK LA+ S D +++ + T H GH+ V ++W+ P
Sbjct: 63 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETP-HFT-CQGHRHWVLSISWS-PD- 118
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP-HELGLC--LACGSSD 125
G LAS +G +++W + V H + + W P H C +A S D
Sbjct: 119 GKTLASGCKNGQILLWDPSTGKQ--VGRVLAGHSKWITGLSWEPLHANPECRYMASSSKD 176
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSW 157
G++ V+ A G + RI H VT + W
Sbjct: 177 GSVRVWDTTA-GRCE--RILTGHTQSVTCLRW 205
Score = 138 (53.6 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 37/118 (31%), Positives = 60/118 (50%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
TGH+ ++ V + +A+AS D SIK+ T ++LA L GH AV+++AW+
Sbjct: 320 TGHQALINQVLFSPDSRIIASASFDKSIKLWD--GRTGKYLASLRGHVAAVYQIAWSADS 377
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
+L S S D T+ +W + + + D H V ++DW+P G +A G D
Sbjct: 378 --RLLVSGSSDSTLKVW-DVKAQKLAAD--LPGHADEVYAVDWSPD--GQRVASGGKD 428
Score = 118 (46.6 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 39/150 (26%), Positives = 73/150 (48%)
Query: 24 KRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83
+RL + S D+++ + + + LA+++GH+ + +V ++ P I+AS SFD ++ +
Sbjct: 293 ERLVSGSDDFTLFMWSPAED-KKPLARMTGHQALINQVLFS-PD-SRIIASASFDKSIKL 349
Query: 84 WKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSR 143
W +G + +++ H ++V I W+ L GSSD + V+ +A +
Sbjct: 350 W-DGRTGKYLAS--LRGHVAAVYQIAWSADSR--LLVSGSSDSTLKVWDVKAQ---KLAA 401
Query: 144 IDQAHPVGVTSVSWAPSTAPGALVGSGFLD 173
H V +V W+P G V SG D
Sbjct: 402 DLPGHADEVYAVDWSPD---GQRVASGGKD 428
Score = 78 (32.5 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 28/113 (24%), Positives = 49/113 (43%)
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQM--HTDWVRDVAWAPNLGLPKSTIASASE 233
++L SG D T+ +W D P +M H + V ++P+ + IASAS
Sbjct: 293 ERLVSGSDDFTLFMWSPAE-----DKKPLARMTGHQALINQVLFSPDSRI----IASASF 343
Query: 234 DGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
D + +W R G L VY+++WS +L ++ + +W+
Sbjct: 344 DKSIKLWD-GRTGKYLAS--LRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWD 393
Score = 78 (32.5 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 31/129 (24%), Positives = 50/129 (38%)
Query: 158 APSTAPGALVGSGFLDPVQKL-CSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVA 216
A T AL+ P ++ S D ++K+W G + +L+ H V +A
Sbjct: 317 ARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKY----LASLRGHVAAVYQIA 372
Query: 217 WAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVA 276
W+ + L + S S D + +W V Q L VY V WS G +A
Sbjct: 373 WSADSRL----LVSGSSDSTLKVWDVKA---QKLAADLPGHADEVYAVDWSPDGQRVASG 425
Query: 277 DGNNNVTLW 285
+ + +W
Sbjct: 426 GKDKCLRIW 434
Score = 45 (20.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 176 QKLCSGGCDNTVKVWK 191
Q++ SGG D +++W+
Sbjct: 420 QRVASGGKDKCLRIWR 435
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 173 (66.0 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 65/238 (27%), Positives = 107/238 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D+V D++ D+ GK LA+ S+D +IK+ + + + GH V VA P
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVA-IMPN- 203
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G + S + D T+ +W E + +K F H+ V + P++ G +A S+D +
Sbjct: 204 GDHIVSAARDKTIKMW-EVQTGYCVK--TFTGHREWVRMV--RPNQDGTLIASCSNDQTV 258
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL---VGSGFLD---PVQKLCSGG 182
V+ + + H V +SWAP ++ ++ GS P L SG
Sbjct: 259 RVWVVATK---ECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315
Query: 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
D T+K+W + G+ C L H +WVR V + G I S ++D + +W
Sbjct: 316 RDKTIKMWDVSTGM----CLMTLVGHDNWVRGVLFHSG-G---KFILSCADDKTLRVW 365
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 66/259 (25%), Positives = 104/259 (40%)
Query: 2 PPQKIE-TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
PP+K +GH V V + +AS D +IK+ T L GH +V +
Sbjct: 98 PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY--ETGDFERTLKGHTDSVQD 155
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA 120
+++ H G +LASCS D T+ +W + E I+ DH +V+S+ P+ G +
Sbjct: 156 ISFDHS--GKLLASCSADMTIKLW-DFQGFECIRTMHGHDH--NVSSVAIMPN--GDHIV 208
Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180
+ D I ++ + G+ H V V P+ G L+ S CS
Sbjct: 209 SAARDKTIKMWEVQT--GYCVKTFT-GHREWVRMVR--PNQ-DGTLIAS---------CS 253
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL----------------GLP 224
D TV+VW + +C L+ H V ++WAP G P
Sbjct: 254 N--DQTVRVWVVAT----KECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKP 307
Query: 225 KSTIASASEDGKVIIWTVA 243
+ S S D + +W V+
Sbjct: 308 GPFLLSGSRDKTIKMWDVS 326
>UNIPROTKB|Q32SG6 [details] [associations]
symbol:Q32SG6 "Protein HIRA" species:4577 "Zea mays"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011494 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07569 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006351
GO:GO:0016568 KO:K11293 EMBL:AY940678 RefSeq:NP_001105835.1
UniGene:Zm.22931 ProteinModelPortal:Q32SG6 IntAct:Q32SG6
GeneID:732736 KEGG:zma:732736 Gramene:Q32SG6 Uniprot:Q32SG6
Length = 964
Score = 179 (68.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 65/216 (30%), Positives = 92/216 (42%)
Query: 78 DGTVIIWK-----EGNSNEWIKDHVF---EDHKSSVNSIDWAPHELGLCLACGSSDGNIS 129
D V IW + N+N K + DH SVN + WA H G LA GS D I
Sbjct: 34 DQKVRIWSMESVHKDNTNNDSKQRLLATLRDHFGSVNCVRWAKH--GRYLASGSDDQVIL 91
Query: 130 VFTARADGGWDTSRIDQAHPVGVTS----VSWAPSTAPGALVGSGFLDPVQKLCSGGCDN 185
+ +A G TS P + ++W TA +V + L SG DN
Sbjct: 92 IHERKAGSG--TSEFGSGEPPDAENWKVIMTWRGHTAD--VVDLSWSPDDSTLASGSLDN 147
Query: 186 TVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA-- 243
T+ +W + NGI C L+ HT V+ V W P +G S IAS S+D V+IW +
Sbjct: 148 TIHIWNMNNGI----CTAVLRGHTSLVKGVTWDP-IG---SFIASQSDDKTVMIWRTSDW 199
Query: 244 REGDQWEGKVLHDFKTPVYR-VSWSLTGNILAVADG 278
+ EG + +R ++WS + + G
Sbjct: 200 SLAHKTEGHWTKSLGSTFFRRLAWSPCCHFITTTHG 235
Score = 104 (41.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 37/110 (33%), Positives = 51/110 (46%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH V D++ LA+ S D +I I + N A L GH V V W P
Sbjct: 123 GHTADVVDLSWSPDDSTLASGSLDNTIHIWNMNNGICT--AVLRGHTSLVKGVTW-DP-I 178
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDH-KSSVNS-----IDWAP 112
GS +AS S D TV+IW+ +++W H E H S+ S + W+P
Sbjct: 179 GSFIASQSDDKTVMIWR---TSDWSLAHKTEGHWTKSLGSTFFRRLAWSP 225
Score = 63 (27.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 224 PKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTG-NILAVA-DGN 279
P + IA S+D + +WT A + + H F V +SWS G ++ A + DG+
Sbjct: 305 PYNVIAIGSQDRTITVWTTASARPLFVAR--HFFSQSVVDLSWSPDGYSLFACSLDGS 360
Score = 39 (18.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 271 NILAVADGNNNVTLWEEA 288
N++A+ + +T+W A
Sbjct: 307 NVIAIGSQDRTITVWTTA 324
>ASPGD|ASPL0000060163 [details] [associations]
symbol:AN1385 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0002098 "tRNA wobble uridine modification"
evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000208901 EMBL:AACD01000019 RefSeq:XP_658989.1
ProteinModelPortal:Q5BDJ5 STRING:Q5BDJ5 GeneID:2877158
KEGG:ani:AN1385.2 OMA:TAIWENI OrthoDB:EOG4CVKH5 Uniprot:Q5BDJ5
Length = 446
Score = 148 (57.2 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 71/273 (26%), Positives = 119/273 (43%)
Query: 26 LATASSDYSIKIIGVGNNTSQHLAKLSG-HKGAVWEVAWAHPKFG-SILASCSFDGTVII 83
+AT SSD ++++ + N + L+ +SG HK ++ AW G S+LA+ SFD TV I
Sbjct: 42 VATCSSDKTVRVYSLVN--FRLLSTISGGHKRSIRTCAWKPNVSGESVLATGSFDATVGI 99
Query: 84 WK------------EGNSN----------------EWIKDHVFEDHKSSVNSIDWAPHEL 115
W+ +GN N EW + + H S V S+ W+
Sbjct: 100 WRRWDDYGEEETLAQGNKNTKNFGAEEDREEDEDDEWRFAVLLDGHDSEVKSVSWSAS-- 157
Query: 116 GLCLACGSSDGNISVFTARADG--GWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLD 173
G+ LA S D +I ++ DG ++T + Q H V V+W P+
Sbjct: 158 GMLLATCSRDKSIWIWEDLEDGDNNFETVAVMQEHEGDVKCVAWHPAE------------ 205
Query: 174 PVQKLCSGGCDNTVKVWKLYNGIW-KMDCFPALQMHTDWVRDVAW--APNLGLPKSTIAS 230
+ L SG D+T+++W+ W ++ C ++ HT V + W A N+ P ++
Sbjct: 206 --ECLASGSYDDTIRIWREDIDDWGQVAC---IKGHTGTVWGIDWEDAENVPFPSTSNGV 260
Query: 231 ASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYR 263
+ ++ + W A G + HD V+R
Sbjct: 261 SGQEEEWKTWH-ALSGPRLVS-CSHDQSVRVWR 291
Score = 143 (55.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 40/109 (36%), Positives = 57/109 (52%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKI---IGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
GH+ V V+ G LAT S D SI I + G+N + +A + H+G V VAW H
Sbjct: 144 GHDSEVKSVSWSASGMLLATCSRDKSIWIWEDLEDGDNNFETVAVMQEHEGDVKCVAW-H 202
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHE 114
P LAS S+D T+ IW+E + ++W + + H +V IDW E
Sbjct: 203 PA-EECLASGSYDDTIRIWRE-DIDDWGQVACIKGHTGTVWGIDWEDAE 249
Score = 78 (32.5 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 245 EGDQWEGKVLHD-FKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287
E D+W VL D + V VSWS +G +LA + ++ +WE+
Sbjct: 132 EDDEWRFAVLLDGHDSEVKSVSWSASGMLLATCSRDKSIWIWED 175
Score = 78 (32.5 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 24/81 (29%), Positives = 37/81 (45%)
Query: 59 WEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELG-L 117
W A HP ++A+CS D TV ++ N + + HK S+ + W P+ G
Sbjct: 31 WLTA-PHPTL-PLVATCSSDKTVRVYSLVNFR--LLSTISGGHKRSIRTCAWKPNVSGES 86
Query: 118 CLACGSSDGNISVFTARADGG 138
LA GS D + ++ D G
Sbjct: 87 VLATGSFDATVGIWRRWDDYG 107
Score = 72 (30.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 26/108 (24%), Positives = 43/108 (39%)
Query: 182 GCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT 241
G + K W +G + C H VR W PK+ + +A I
Sbjct: 262 GQEEEWKTWHALSGPRLVSC-----SHDQSVR--VWRRQ---PKAQLNTAGASSIPSIIR 311
Query: 242 VAREGDQWEGKVL--HDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287
+ + WE V+ H + P+Y V+WS +LA + + ++EE
Sbjct: 312 PSGTDETWEEDVVLPHAHELPIYAVAWSRRTGLLASVGADGRLVVYEE 359
Score = 47 (21.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 7/37 (18%), Positives = 17/37 (45%)
Query: 208 HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAR 244
H W + + + + + ++DG + +WT+ R
Sbjct: 410 HVAWAKRADRGRDGNKEEEVLITTADDGSIKVWTLTR 446
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 143 (55.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 57/194 (29%), Positives = 81/194 (41%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
+ET D + D M Y+ A S Y G S+ + L HK VW V +++
Sbjct: 179 VETAVMDQI-DTCM-YHNS--CDAVSLYKDHCCGRDQIPSETVQILVAHKNEVWFVQFSN 234
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
G LA+ S D T IIWK + N+ H E H++ V+ + W+P + L L CG
Sbjct: 235 S--GKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKL-LTCG--- 288
Query: 126 GNISVFTARADGGWDTSRIDQAHPVG-------VTSVSWAPSTAPGALVGSGFLDPVQKL 178
N V WD H G V+S +W P + LV G DP + +
Sbjct: 289 -NAEVLKL-----WDVDTGVLRHTFGNNNTGFTVSSCAWFPDST--RLV-CGSSDPERGI 339
Query: 179 CSGGCD-NTVKVWK 191
D N +K W+
Sbjct: 340 VMWDTDGNEIKAWR 353
Score = 105 (42.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 44/156 (28%), Positives = 69/156 (44%)
Query: 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAK-LSGHKGAVWEVAW 63
+I H++ V V GK LATASSD + I V ++ L L H+ V V+W
Sbjct: 218 QILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSW 277
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKS--SVNSIDWAPHELGLCLAC 121
+ P +L +C + +W + + + H F ++ + +V+S W P L C
Sbjct: 278 S-PDDTKLL-TCGNAEVLKLW---DVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRL--VC 330
Query: 122 GSSDGNISVFTARADGG----WDTSRIDQAHPVGVT 153
GSSD + DG W +RI + + VT
Sbjct: 331 GSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVT 366
Score = 74 (31.1 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 22/65 (33%), Positives = 30/65 (46%)
Query: 222 GLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTG-NILAVADGNN 280
GL S IAS SED +V IW + +VL V VSW+ +LA A +
Sbjct: 452 GLDSSFIASGSEDSQVYIWNLKNTKPL---EVLSGHSMTVNCVSWNPKNPRMLASASDDQ 508
Query: 281 NVTLW 285
+ +W
Sbjct: 509 TIRIW 513
Score = 67 (28.6 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ SG D+ V +W L N L H+ V V+W P P+ +ASAS+D +
Sbjct: 458 IASGSEDSQVYIWNLKN----TKPLEVLSGHSMTVNCVSWNPKN--PRM-LASASDDQTI 510
Query: 238 IIW 240
IW
Sbjct: 511 RIW 513
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 135 (52.6 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 46/152 (30%), Positives = 67/152 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH + V + G LA+ S D ++++ + N + H +GHK V V+WA P
Sbjct: 117 GHAEAVVSLNFSPDGAHLASGSGDTTVRLWDL-NTETPHFT-CTGHKQWVLCVSWA-PD- 172
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP-HELGLC--LACGSSD 125
G LAS G++IIW + K HK +N + W P H C LA S D
Sbjct: 173 GKRLASGCKAGSIIIWDPETGQQ--KGRPLSGHKKHINCLAWEPYHRDPECRKLASASGD 230
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSW 157
G+ ++ + G I H VT+V W
Sbjct: 231 GDCRIWDVKL--GQCLMNI-AGHTNAVTAVRW 259
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
TGH++ V+DV K +A+AS D S+++ + Q++A GH AV+ VAW+
Sbjct: 372 TGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDG--QYMATFRGHVQAVYTVAWSADS 429
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
++ S S D T+ +W + + ++ H V +DWAP G +A G D
Sbjct: 430 --RLIVSGSKDSTLKVWSV-QTKKLAQE--LPGHADEVFGVDWAPD--GSRVASGGKDKV 482
Query: 128 ISVF 131
I ++
Sbjct: 483 IKLW 486
Score = 124 (48.7 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 85/307 (27%), Positives = 127/307 (41%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWA--H 65
TGH+ V V+ GKRLA+ SI II Q LSGHK + +AW H
Sbjct: 158 TGHKQWVLCVSWAPDGKRLASGCKAGSI-IIWDPETGQQKGRPLSGHKKHINCLAWEPYH 216
Query: 66 --PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
P+ LAS S DG IW + + + + H ++V ++ W GL + S
Sbjct: 217 RDPECRK-LASASGDGDCRIW-DVKLGQCLMN--IAGHTNAVTAVRWGG--AGL-IYTSS 269
Query: 124 SDGNISVFTARADG-------G---WDTS---------RIDQAHPVGVTSVSWAPSTAPG 164
D + ++ A ADG G W + R HPV S S S +
Sbjct: 270 KDRTVKMWRA-ADGILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRSKSHL-SLSTE 327
Query: 165 ALVGSGFLDPVQKLCSGGCDNTVKVWK---LYNGIWKMD---CFPALQMHTDWVRDVAWA 218
L S L Q +C ++ V LY +W+ + C + H + V DV ++
Sbjct: 328 ELQESA-LKRYQAVCPDEVESLVSCSDDNTLY--LWRNNQNKCVERMTGHQNVVNDVKYS 384
Query: 219 PNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADG 278
P++ L IASAS D V +W A +G Q+ VY V+WS ++
Sbjct: 385 PDVKL----IASASFDKSVRLWR-ASDG-QYMA-TFRGHVQAVYTVAWSADSRLIVSGSK 437
Query: 279 NNNVTLW 285
++ + +W
Sbjct: 438 DSTLKVW 444
Score = 82 (33.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 29/111 (26%), Positives = 50/111 (45%)
Query: 175 VQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASED 234
V+ + S D +V++W+ +G + M F H V VAW+ + L I S S+D
Sbjct: 387 VKLIASASFDKSVRLWRASDGQY-MATFRG---HVQAVYTVAWSADSRL----IVSGSKD 438
Query: 235 GKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW 285
+ +W+V + E L V+ V W+ G+ +A + + LW
Sbjct: 439 STLKVWSVQTKKLAQE---LPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 138 (53.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 37/118 (31%), Positives = 60/118 (50%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
TGH+ ++ V + +A+AS D SIK+ T ++LA L GH AV+++AW+
Sbjct: 369 TGHQALINQVLFSPDSRIIASASFDKSIKLWD--GRTGKYLASLRGHVAAVYQIAWSADS 426
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
+L S S D T+ +W + + + D H V ++DW+P G +A G D
Sbjct: 427 --RLLVSGSSDSTLKVW-DVKAQKLAAD--LPGHADEVYAVDWSPD--GQRVASGGKD 477
Score = 133 (51.9 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 42/152 (27%), Positives = 66/152 (43%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH + V VA GK LA+ S D +++ + T H GH+ V ++W+ P
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETP-HFT-CQGHRHWVLSISWS-PD- 167
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP-HELGLC--LACGSSD 125
G LAS +G +++W + H + ++ W P H C +A S D
Sbjct: 168 GKKLASGCKNGQILLWDPSTGKQ--VGRALAGHSKWITALSWEPLHANPECRYVASSSKD 225
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSW 157
G++ V+ A G + RI H VT + W
Sbjct: 226 GSVRVWDTTA-GRCE--RILTGHTQSVTCLRW 254
Score = 119 (46.9 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 39/150 (26%), Positives = 73/150 (48%)
Query: 24 KRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83
+RL + S D+++ + + + LA+++GH+ + +V ++ P I+AS SFD ++ +
Sbjct: 342 ERLVSGSDDFTLFLWSPAED-KKPLARMTGHQALINQVLFS-PD-SRIIASASFDKSIKL 398
Query: 84 WKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSR 143
W +G + +++ H ++V I W+ L GSSD + V+ +A +
Sbjct: 399 W-DGRTGKYLAS--LRGHVAAVYQIAWSADSR--LLVSGSSDSTLKVWDVKAQ---KLAA 450
Query: 144 IDQAHPVGVTSVSWAPSTAPGALVGSGFLD 173
H V +V W+P G V SG D
Sbjct: 451 DLPGHADEVYAVDWSPD---GQRVASGGKD 477
Score = 78 (32.5 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 31/129 (24%), Positives = 50/129 (38%)
Query: 158 APSTAPGALVGSGFLDPVQKL-CSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVA 216
A T AL+ P ++ S D ++K+W G + +L+ H V +A
Sbjct: 366 ARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKY----LASLRGHVAAVYQIA 421
Query: 217 WAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVA 276
W+ + L + S S D + +W V Q L VY V WS G +A
Sbjct: 422 WSADSRL----LVSGSSDSTLKVWDVKA---QKLAADLPGHADEVYAVDWSPDGQRVASG 474
Query: 277 DGNNNVTLW 285
+ + +W
Sbjct: 475 GKDKCLRIW 483
Score = 45 (20.9 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 176 QKLCSGGCDNTVKVWK 191
Q++ SGG D +++W+
Sbjct: 469 QRVASGGKDKCLRIWR 484
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 41/139 (29%), Positives = 67/139 (48%)
Query: 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVA 62
P K TGH+ V+ V D G LA+ S D + KI + +T H L H ++ +
Sbjct: 440 PAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVH--DLREHTKEIYTIR 497
Query: 63 WA-------HPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHEL 115
W+ +P LAS SFD TV +W + + + F H+ V S+ ++P+
Sbjct: 498 WSPTGPGTNNPNKQLTLASASFDSTVKLW-DAELGKMLCS--FNGHREPVYSLAFSPN-- 552
Query: 116 GLCLACGSSDGNISVFTAR 134
G +A GS D +I +++ +
Sbjct: 553 GEYIASGSLDKSIHIWSIK 571
Score = 112 (44.5 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 42/156 (26%), Positives = 67/156 (42%)
Query: 23 GKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVI 82
G LAT S D +I + ++ LS HKG ++ + W K G L + S D T +
Sbjct: 336 GTLLATGSCDGQARIWTLNGEL---ISTLSKHKGPIFSLKWN--KKGDYLLTGSVDRTAV 390
Query: 83 IWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTS 142
+W + + EW + FE H +DW + + A S+D I + + G +
Sbjct: 391 VW-DVKAEEWKQQ--FEFHSGPTLDVDWRNN---VSFATSSTDSMI--YLCKI-GETRPA 441
Query: 143 RIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
+ H V V W P+ G+L+ S D K+
Sbjct: 442 KTFTGHQGEVNCVKWDPT---GSLLASCSDDSTAKI 474
Score = 104 (41.7 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 37/119 (31%), Positives = 59/119 (49%)
Query: 168 GSGFLDPVQKL--CSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPK 225
G G +P ++L S D+TVK+W G KM C + H + V +A++PN G
Sbjct: 502 GPGTNNPNKQLTLASASFDSTVKLWDAELG--KMLC--SFNGHREPVYSLAFSPN-G--- 553
Query: 226 STIASASEDGKVIIWTVAREGDQWEGKVLHDF--KTPVYRVSWSLTGNILAVADGNNNV 282
IAS S D + IW++ EGK++ + ++ V W+ GN +A +N+V
Sbjct: 554 EYIASGSLDKSIHIWSIK------EGKIVKTYTGNGGIFEVCWNKEGNKIAACFADNSV 606
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 134 (52.2 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 54/175 (30%), Positives = 74/175 (42%)
Query: 25 RLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW 84
RLAT S D + +I T +H K GH G V V+W+ P G+ LA+CS D TV IW
Sbjct: 167 RLATGSGDNTARIWDAETGTPKHTLK--GHAGWVLGVSWS-PD-GTRLATCSMDKTVRIW 222
Query: 85 KEGNSNEWIKDHVFEDHKSSVNSIDWAPHEL---GLC-LACGSSDGNISVFTARADGGWD 140
+ + + + + + H V I W P L G L S D ++T
Sbjct: 223 -DPETGKQVGSEL-KGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWTVNTGR--- 277
Query: 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNG 195
T + H V+ V W GA G+G + + D TVKVW G
Sbjct: 278 TEHVLSGHKGSVSCVRW------GAGNGTGVV------YTASHDKTVKVWDAVKG 320
Score = 111 (44.1 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 43/157 (27%), Positives = 73/157 (46%)
Query: 24 KRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83
+RL +AS D+++ + N+ ++ +A++ GH+ V V ++ P GS++AS +D +
Sbjct: 382 ERLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFS-PD-GSMIASAGWDNATKL 439
Query: 84 W--KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDT 141
W ++G ++ HV ++ S + A L L S D + V+ R G T
Sbjct: 440 WNARDGKFINTLRGHVAPVYQCSFS----ADSRL---LVTASKDTTLKVWNVRT-GKLAT 491
Query: 142 SRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
H V V W+P G VGSG D +L
Sbjct: 492 DL--PGHEDEVYGVDWSPD---GQRVGSGGRDKAVRL 523
Score = 106 (42.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 54/200 (27%), Positives = 80/200 (40%)
Query: 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVA 62
P+ GH V V+ G RLAT S D +++I Q ++L GH V +A
Sbjct: 187 PKHTLKGHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPETG-KQVGSELKGHAKWVQGIA 245
Query: 63 WA--HP-KFGSI-LASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLC 118
W H + G+ L S S D T IW N +HV HK SV+ + W
Sbjct: 246 WEPLHLWRDGTPRLVSASKDFTARIW---TVNTGRTEHVLSGHKGSVSCVRW-------- 294
Query: 119 LACGSSDGNISVFTARADGG---WDTSRIDQAHPVGVTSVSWAPSTAPGA--LVGSGFLD 173
G+ +G V+TA D WD + H + + W A + +GF D
Sbjct: 295 ---GAGNGTGVVYTASHDKTVKVWDAVKGTLLHDLK-SHAHWVNHLALSTDFVCRTGFFD 350
Query: 174 PVQKLCSGGCDNTVKVWKLY 193
+ + + + T K + Y
Sbjct: 351 HTKTVPATAEEKTAKAKERY 370
Score = 101 (40.6 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 39/131 (29%), Positives = 58/131 (44%)
Query: 25 RLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW 84
RL +AS D++ +I V ++H+ LSGHKG+V V W ++ + S D TV +W
Sbjct: 258 RLVSASKDFTARIWTVNTGRTEHV--LSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVW 315
Query: 85 KEGNSNEWIKDHVFEDHKSSVNSIDWAPH-ELGLCLAC--GSSDGNISV-FTARADGGWD 140
+ +K + D KS + W H L C G D +V TA
Sbjct: 316 ------DAVKGTLLHDLKSHAH---WVNHLALSTDFVCRTGFFDHTKTVPATAEEKTAKA 366
Query: 141 TSRIDQAHPVG 151
R ++A VG
Sbjct: 367 KERYEKAARVG 377
Score = 77 (32.2 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 33/113 (29%), Positives = 50/113 (44%)
Query: 175 VQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQM--HTDWVRDVAWAPNLGLPKSTIASAS 232
V++L S D T+ ++ N K P +M H V V ++P+ G S IASA
Sbjct: 381 VERLVSASDDFTMYLFDPLNDGTK----PIARMIGHQKQVNHVTFSPD-G---SMIASAG 432
Query: 233 EDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW 285
D +W AR+G L PVY+ S+S +L A + + +W
Sbjct: 433 WDNATKLWN-ARDGKFIN--TLRGHVAPVYQCSFSADSRLLVTASKDTTLKVW 482
Score = 70 (29.7 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 28/108 (25%), Positives = 46/108 (42%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ S G DN K+W +G + L+ H V +++ + L + +AS+D +
Sbjct: 428 IASAGWDNATKLWNARDGKF----INTLRGHVAPVYQCSFSADSRL----LVTASKDTTL 479
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW 285
+W V R G H+ + VY V WS G + + V LW
Sbjct: 480 KVWNV-RTGKLATDLPGHEDE--VYGVDWSPDGQRVGSGGRDKAVRLW 524
Score = 44 (20.5 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 176 QKLCSGGCDNTVKVWK 191
Q++ SGG D V++W+
Sbjct: 510 QRVGSGGRDKAVRLWR 525
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 119 (46.9 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 52/178 (29%), Positives = 77/178 (43%)
Query: 2 PPQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEV 61
P ++E GHE + G+ L ++ D I I V + +A +SGH GAV E
Sbjct: 47 PIMQLE-GHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMA-MSGHSGAVMEA 104
Query: 62 AWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLAC 121
+ P GS + +CS D T+ W + F+ H + VNS+ + G L C
Sbjct: 105 HFT-PD-GSHIFTCSTDKTLAFWDIATGQ---RQRRFKGHGNFVNSVQGSRR--GQQLLC 157
Query: 122 -GSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
GS D I ++ AR T P VT+V + + G V SG +D K+
Sbjct: 158 SGSDDRTIKIWDARKKHAAHTLE----SPFQVTAVCFGDT---GEQVISGGIDNEVKI 208
Score = 88 (36.0 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 30/122 (24%), Positives = 58/122 (47%)
Query: 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
F D +++ SGG DN VK+W I K L+ H+D + ++ +P G I +
Sbjct: 190 FGDTGEQVISGGIDNEVKIWD----IRKQAVLHHLRGHSDTITGMSLSPE-G---DFILT 241
Query: 231 ASEDGKVIIWTVA--REGDQ----WEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTL 284
+ D + +W V G++ ++G H+F+ + R +WS + + + +V +
Sbjct: 242 NAMDNTLRVWDVRPYAPGERCVKVFQGHQ-HNFEKNLLRCAWSPGSDKITSGSADRHVYI 300
Query: 285 WE 286
W+
Sbjct: 301 WD 302
Score = 72 (30.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 26 LATASSDYSIKIIGVG--NNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83
+A + D ++ GV +N + +L GH+G ++ + HP+ G +L S FD + I
Sbjct: 24 MAYTNRDKALLESGVRRTSNLQAPIMQLEGHEGEIFTAEF-HPE-GELLLSSGFDRQIYI 81
Query: 84 WK 85
W+
Sbjct: 82 WQ 83
Score = 60 (26.2 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 21/69 (30%), Positives = 32/69 (46%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHT-DWVRDV---AWAPNLGLPKSTIASASE 233
+ + DNT++VW + C Q H ++ +++ AW+P G K I S S
Sbjct: 239 ILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSP--GSDK--ITSGSA 294
Query: 234 DGKVIIWTV 242
D V IW V
Sbjct: 295 DRHVYIWDV 303
>ZFIN|ZDB-GENE-020419-34 [details] [associations]
symbol:dtl "denticleless homolog (Drosophila)"
species:7955 "Danio rerio" [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IMP] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IEA;ISS] [GO:0031465
"Cul4B-RING ubiquitin ligase complex" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0009411 "response to UV"
evidence=ISS] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 ZFIN:ZDB-GENE-020419-34 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0007095 GO:GO:0009411
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006511 GO:GO:0000209 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 HOVERGEN:HBG057737
KO:K11790 CTD:51514 GeneTree:ENSGT00530000064210
HOGENOM:HOG000112290 OrthoDB:EOG4N5VWH EMBL:AF506212 EMBL:BX511163
EMBL:BX510324 EMBL:BC045316 IPI:IPI00505024 RefSeq:NP_775348.1
UniGene:Dr.3526 ProteinModelPortal:Q5RHI5 STRING:Q5RHI5
Ensembl:ENSDART00000034098 GeneID:192314 KEGG:dre:192314
InParanoid:Q5RHI5 OMA:HENAVFD NextBio:20797151 Bgee:Q5RHI5
Uniprot:Q5RHI5
Length = 647
Score = 125 (49.1 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 37/149 (24%), Positives = 63/149 (42%)
Query: 17 VAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCS 76
+++DY G RL + +D +I + + + +A SGH + + V LAS S
Sbjct: 272 LSLDYTGSRLFSNCTDDNIYMFNISGLKTTPVAVFSGHSNSSFYVKSTVSPDDQFLASGS 331
Query: 77 FDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARAD 136
D V IWK + + + + H V S+ W P + +C S D + ++
Sbjct: 332 SDHNVYIWKISDPKQ--APMMLQGHSQEVTSVAWCPTDFTKIASC-SDDNTVRIWRLNRK 388
Query: 137 GGWDTSRIDQAHPVGVTSVS-WAPSTAPG 164
+ S I + VG T +P+ PG
Sbjct: 389 PEGENSTIQDGNLVGWTIRKVQSPNRTPG 417
Score = 119 (46.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 48/180 (26%), Positives = 79/180 (43%)
Query: 26 LATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85
LA A+ + + I G S L + H AV+++AW P + L + S D T +W
Sbjct: 68 LAVANEEGFVTIFNTGEKQSSVLKEWQAHDNAVFDIAWV-PGT-NCLVTASGDQTARLW- 124
Query: 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARA---DGGW-DT 141
+ + + + F+ H+ S+ S+ + E + + G DGNI ++ R DG +
Sbjct: 125 DVITGDLLG--TFKGHQCSLKSVAFYKQEKAV-FSTGGRDGNIMIWDTRCSKKDGFYRQV 181
Query: 142 SRIDQAH--PVGVTSVS-----WAP--STAPGALVGSGFLDPVQKLCSGGCDNTVKVWKL 192
+I AH P T + AP + G V F D + + SG D +K+W L
Sbjct: 182 KQISGAHMKPERFTPQTKKRRGMAPPVDSQQGVTVVL-FCDETKLISSGAVDGIIKMWDL 240
Score = 92 (37.4 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 27/81 (33%), Positives = 38/81 (46%)
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG 235
Q L SG D+ V +WK+ + LQ H+ V VAW P + IAS S+D
Sbjct: 325 QFLASGSSDHNVYIWKISD---PKQAPMMLQGHSQEVTSVAWCPT---DFTKIASCSDDN 378
Query: 236 KVIIWTVAREGDQWEGKVLHD 256
V IW + R+ + E + D
Sbjct: 379 TVRIWRLNRK-PEGENSTIQD 398
Score = 68 (29.0 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFG 69
H++ V D+A L TAS D + ++ V T L GH+ ++ VA+ + +
Sbjct: 96 HDNAVFDIAWVPGTNCLVTASGDQTARLWDV--ITGDLLGTFKGHQCSLKSVAF-YKQEK 152
Query: 70 SILASCSFDGTVIIW 84
++ ++ DG ++IW
Sbjct: 153 AVFSTGGRDGNIMIW 167
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 138 (53.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 37/118 (31%), Positives = 60/118 (50%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
TGH+ ++ V + +A+AS D SIK+ T ++LA L GH AV+++AW+
Sbjct: 370 TGHQALINQVVFSPDSRVIASASFDKSIKLWD--GRTGKYLASLRGHVAAVYQIAWSADS 427
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
+L S S D T+ +W + + + D H V ++DW+P G +A G D
Sbjct: 428 --RLLVSGSSDSTLKVW-DVKAQKLSTD--LPGHADEVYAVDWSPD--GQRVASGGKD 478
Score = 128 (50.1 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 41/152 (26%), Positives = 65/152 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH + V VA GK LA+ S D +++ + T H GH+ V ++W+ P
Sbjct: 113 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETP-HFT-CQGHRHWVLSISWS-PD- 168
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP-HELGLC--LACGSSD 125
G LAS +G +++W + H + ++ W P H C +A S D
Sbjct: 169 GKKLASGCKNGQILLWDPSTGKQ--VGRALTGHSKWITALSWEPLHANPECRYVASSSKD 226
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSW 157
G++ V+ A G + R H VT + W
Sbjct: 227 GSVRVWDTTA-GRCE--RTLTGHAQSVTCLRW 255
Score = 122 (48.0 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 39/150 (26%), Positives = 73/150 (48%)
Query: 24 KRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83
+RL + S D+++ + + + LA+++GH+ + +V ++ P ++AS SFD ++ +
Sbjct: 343 ERLVSGSDDFTLFLWSPAED-KKPLARMTGHQALINQVVFS-PD-SRVIASASFDKSIKL 399
Query: 84 WKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSR 143
W +G + +++ H ++V I W+ L GSSD + V+ +A S
Sbjct: 400 W-DGRTGKYLAS--LRGHVAAVYQIAWSADSR--LLVSGSSDSTLKVWDVKAQ---KLST 451
Query: 144 IDQAHPVGVTSVSWAPSTAPGALVGSGFLD 173
H V +V W+P G V SG D
Sbjct: 452 DLPGHADEVYAVDWSPD---GQRVASGGKD 478
Score = 78 (32.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 30/129 (23%), Positives = 51/129 (39%)
Query: 158 APSTAPGALVGSGFLDPVQK-LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVA 216
A T AL+ P + + S D ++K+W G + +L+ H V +A
Sbjct: 367 ARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKY----LASLRGHVAAVYQIA 422
Query: 217 WAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVA 276
W+ + L + S S D + +W V + + L VY V WS G +A
Sbjct: 423 WSADSRL----LVSGSSDSTLKVWDVKAQKLSTD---LPGHADEVYAVDWSPDGQRVASG 475
Query: 277 DGNNNVTLW 285
+ + +W
Sbjct: 476 GKDKCLRIW 484
Score = 45 (20.9 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 176 QKLCSGGCDNTVKVWK 191
Q++ SGG D +++W+
Sbjct: 470 QRVASGGKDKCLRIWR 485
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 160 (61.4 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 47/179 (26%), Positives = 80/179 (44%)
Query: 46 QHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVF-EDHKSS 104
+ + KL +W ++W H GS+L S D + +W + N W E HK S
Sbjct: 5 REVQKLKASNKRLWSLSWNHK--GSVLISSGEDRVIKLWAKCNDQLWGSSFSLPEAHKKS 62
Query: 105 VNSIDWAPHELGLCLACGSSDGNISVFT-ARADGGWDTSRID--QAHPVGVTSVSWAPST 161
+ + W+P G +A S DG ++++ + A + + + H V V+W PS
Sbjct: 63 IRCVTWSP--CGTYIASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWCPS- 119
Query: 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPN 220
G L+ + C G D +V +W+ ++ + C LQ H+ V+ VAW P+
Sbjct: 120 --GHLIAT---------C--GRDKSVWLWE-FDDEEDVQCVSVLQPHSQDVKSVAWHPH 164
Score = 147 (56.8 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 59/218 (27%), Positives = 89/218 (40%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTS----QHLAKLSGHKGAVWEVAWAH 65
H+ ++ V G +A+AS D ++ I + S + L L GH V VAW
Sbjct: 59 HKKSIRCVTWSPCGTYIASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWC- 117
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
P G ++A+C D +V +W+ + + V + H V S+ W PH G L S D
Sbjct: 118 PS-GHLIATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAWHPH--GEVLVSTSYD 174
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS--GGC 183
I+V+ D W H V ++PS G ++ S D KL S G C
Sbjct: 175 NKINVYREELDD-WTVFAQLSGHDSTVWKAEFSPS---GDILASCSDDLCVKLWSWEGVC 230
Query: 184 DNTVKVWKLYNGIWKMDCFPALQ-MHTDWVRDVAWAPN 220
+ W C L HT + D+ W+P+
Sbjct: 231 GKSSS--------WM--CIATLSGYHTRTIFDLNWSPD 258
Score = 126 (49.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 45/175 (25%), Positives = 71/175 (40%)
Query: 116 GLCLACGSSDGNISVFTARADGGWDTS-RIDQAHPVGVTSVSWAPSTAPGALVGSGFLDP 174
G L D I ++ D W +S + +AH + V+W+P G + S D
Sbjct: 26 GSVLISSGEDRVIKLWAKCNDQLWGSSFSLPEAHKKSIRCVTWSPC---GTYIASASFD- 81
Query: 175 VQKLCSGGCDNTVKVWKLY--NGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASAS 232
TV +WK+ + +M+ +L+ HT V+ VAW P+ L IA+
Sbjct: 82 ----------GTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWCPSGHL----IATCG 127
Query: 233 EDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287
D V +W E D VL V V+W G +L +N + ++ E
Sbjct: 128 RDKSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAWHPHGEVLVSTSYDNKINVYRE 182
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 153 (58.9 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 51/171 (29%), Positives = 73/171 (42%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
TG ED G +A+A D I I N + L L GH W ++
Sbjct: 1519 TGLEDGATACCYSRDGSMIASAGKDSIIHIFKASNGSE--LLTLVGHSN--WISCFSFSD 1574
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G LAS S+D TVI+W N+ H F+DH +VN +++P L ++C + D +
Sbjct: 1575 DGKTLASSSWDNTVIVWDLIVGNQI---HQFKDHSRAVNYCEFSPTANNLLMSC-AWDSS 1630
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
I +F + R AH V S W+P G L+ S D K+
Sbjct: 1631 IIIFNTSDKNIFRNFR--SAHSKPVNSCCWSPD---GTLIASSSWDGTIKI 1676
Score = 66 (28.3 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 28/115 (24%), Positives = 55/115 (47%)
Query: 174 PVQKLCS-GGCDNTVKVWKLY-NGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA 231
P Q L + G D TV+++ + N I++ L HT + + ++P+ L IAS
Sbjct: 1793 PTQPLLAVGATDCTVRLFDVSSNTIYRE--VAKLHGHTRAITSITFSPSGNL----IAST 1846
Query: 232 SEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVT-LW 285
SED + +W V ++ + H+ P+ +S++ T ++ ++ T +W
Sbjct: 1847 SEDLLIKVWNVQTHKAEYTIEKAHN--DPINCISFNPTNECELISCSDDYSTKVW 1899
Score = 59 (25.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 25/108 (23%), Positives = 47/108 (43%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ +G D T KVW G ++ F L W +A++P L +A + D V
Sbjct: 1755 IVTGSDDATAKVWSSTLGT-QLTNF--LIPGDCWANCLAFSPTQPL----LAVGATDCTV 1807
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW 285
++ V+ E LH + +++S +GN++A + + +W
Sbjct: 1808 RLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVW 1855
Score = 57 (25.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG 235
+KL SGG D ++VW + ++ C L+ H+ + + + + I SAS DG
Sbjct: 1969 KKLVSGGWDFNLRVWNIKTQK-ELLC---LKGHSSSIEKAFFTKD----QKYIISASFDG 2020
Query: 236 KVIIW 240
V +W
Sbjct: 2021 SVKVW 2025
Score = 54 (24.1 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 223 LPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNV 282
L + + S S D +I+W + E + +H ++P+ S + N + AD N N+
Sbjct: 2370 LDSTRLVSVSNDRSLIVWNFSTSSI--ENEFIH--QSPI--TSMDIHQNQIITADKNGNI 2423
Score = 49 (22.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 16/82 (19%), Positives = 34/82 (41%)
Query: 205 LQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRV 264
L+ HTDWV ++P+ + S D + +W + Q E L + + +
Sbjct: 1952 LKGHTDWVNFCTFSPD----SKKLVSGGWDFNLRVWNIKT---QKELLCLKGHSSSIEKA 2004
Query: 265 SWSLTGNILAVADGNNNVTLWE 286
++ + A + +V +W+
Sbjct: 2005 FFTKDQKYIISASFDGSVKVWD 2026
Score = 45 (20.9 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 227 TIASASEDGKVIIW 240
+IAS+S+DG V +W
Sbjct: 2119 SIASSSDDGTVKLW 2132
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 51/169 (30%), Positives = 80/169 (47%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFG 69
H +V V G+RL TAS D S+K+ GV + L L+ H V A P G
Sbjct: 101 HTASVRSVHFSRDGQRLVTASDDKSVKVWGV--ERKKFLYSLNRHTNWV-RCARFSPD-G 156
Query: 70 SILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNIS 129
++ASC D TV +W + +S++ I ++F D+ S +D+ + G C+A +D I
Sbjct: 157 RLIASCGDDRTVRLW-DTSSHQCI--NIFTDYGGSATFVDF--NSSGTCIASSGADNTIK 211
Query: 130 VFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
++ R + ++ H GV S+ PS G + SG D K+
Sbjct: 212 IWDIRTNKLIQHYKV---HNAGVNCFSFHPS---GNYLISGSSDSTIKI 254
Score = 107 (42.7 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH+D + + K+LAT S D S+ I + + GH + V +A P
Sbjct: 16 GHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAF--RFVGHTDVITGVNFA-PS- 71
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
GS++AS S D TV +W E VF+ H +SV S+ ++ G L S D ++
Sbjct: 72 GSLVASSSRDQTVRLWTPSIKGE---STVFKAHTASVRSVHFSRD--GQRLVTASDDKSV 126
Query: 129 SVF 131
V+
Sbjct: 127 KVW 129
Score = 100 (40.3 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 29/111 (26%), Positives = 53/111 (47%)
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG 235
Q+L + D +VKVW G+ + +L HT+WVR ++P+ L IAS +D
Sbjct: 115 QRLVTASDDKSVKVW----GVERKKFLYSLNRHTNWVRCARFSPDGRL----IASCGDDR 166
Query: 236 KVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
V +W + Q + D+ V ++ +G +A + +N + +W+
Sbjct: 167 TVRLWDTSSH--QCIN-IFTDYGGSATFVDFNSSGTCIASSGADNTIKIWD 214
Score = 86 (35.3 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 30/112 (26%), Positives = 53/112 (47%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ S G DNT+K+W + K+ ++H V ++ P+ G + + S S D +
Sbjct: 201 IASSGADNTIKIWDIRTN--KL--IQHYKVHNAGVNCFSFHPS-G---NYLISGSSDSTI 252
Query: 238 IIWTVAREGDQWEGKV---LHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
I D EG++ LH K PV V++S G++ A ++ V +W+
Sbjct: 253 KIL------DLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWK 298
>WB|WBGene00012479 [details] [associations]
symbol:Y18D10A.9 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000003 GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:AL034393 PIR:T26531
RefSeq:NP_493247.2 ProteinModelPortal:Q9XW12 SMR:Q9XW12
IntAct:Q9XW12 STRING:Q9XW12 PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9
GeneID:173152 KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 158 (60.7 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 71/290 (24%), Positives = 118/290 (40%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
++ H V VA GK L +AS D S+ + + + KL GH+ V ++
Sbjct: 62 LDDSHTRAVRSVAFSNDGKCLVSASFDASVVVYQQEDGEFAEVNKLEGHESEVKCAVFS- 120
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
K LA+CS D +V W++ ++ + + H V + W P E L ++C S D
Sbjct: 121 -KSDEFLATCSRDKSVWFWQQDEDEDFSVSSILQPHTQDVKQVAWHPTE-DLLVSC-SYD 177
Query: 126 GNISVFTARADG-GWDTS-RIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGC 183
+I + R DG W T +ID H V S+++ T LV G +Q
Sbjct: 178 SSIRFY--RFDGEDWVTQQKIDGCHVGTVWSIAF--DTEGHRLVTVGEDHCIQLFVRENI 233
Query: 184 DNTVKVWKLYNGIWKMDCFPALQMHTDW-VRDVAWAPNLGLPKSTIASASEDGKVIIWTV 242
+ + + + D +T W + VAW IA+ D K+ ++ +
Sbjct: 234 GSKSADQDTWKSVARYDV-----ENTRWPLYSVAWNST----NDVIATGGGDCKIRLFKI 284
Query: 243 AR--EGDQWEGK-VLHDFKTPVYRVSWSLT---GNILAVADGNNNVTLWE 286
+ E E V+ + V V+W+ N+L A + + LWE
Sbjct: 285 SSTPESPVIEHLGVVGRHELDVNHVAWNPNPKFSNLLTSASDDGTIRLWE 334
>UNIPROTKB|Q9XW12 [details] [associations]
symbol:Y18D10A.9 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1 homolog" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003 GO:GO:0016226
HOGENOM:HOG000208901 OMA:SWKCVCT GeneTree:ENSGT00700000104486
EMBL:AL034393 PIR:T26531 RefSeq:NP_493247.2
ProteinModelPortal:Q9XW12 SMR:Q9XW12 IntAct:Q9XW12 STRING:Q9XW12
PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9 GeneID:173152
KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 158 (60.7 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 71/290 (24%), Positives = 118/290 (40%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
++ H V VA GK L +AS D S+ + + + KL GH+ V ++
Sbjct: 62 LDDSHTRAVRSVAFSNDGKCLVSASFDASVVVYQQEDGEFAEVNKLEGHESEVKCAVFS- 120
Query: 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
K LA+CS D +V W++ ++ + + H V + W P E L ++C S D
Sbjct: 121 -KSDEFLATCSRDKSVWFWQQDEDEDFSVSSILQPHTQDVKQVAWHPTE-DLLVSC-SYD 177
Query: 126 GNISVFTARADG-GWDTS-RIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGC 183
+I + R DG W T +ID H V S+++ T LV G +Q
Sbjct: 178 SSIRFY--RFDGEDWVTQQKIDGCHVGTVWSIAF--DTEGHRLVTVGEDHCIQLFVRENI 233
Query: 184 DNTVKVWKLYNGIWKMDCFPALQMHTDW-VRDVAWAPNLGLPKSTIASASEDGKVIIWTV 242
+ + + + D +T W + VAW IA+ D K+ ++ +
Sbjct: 234 GSKSADQDTWKSVARYDV-----ENTRWPLYSVAWNST----NDVIATGGGDCKIRLFKI 284
Query: 243 AR--EGDQWEGK-VLHDFKTPVYRVSWSLT---GNILAVADGNNNVTLWE 286
+ E E V+ + V V+W+ N+L A + + LWE
Sbjct: 285 SSTPESPVIEHLGVVGRHELDVNHVAWNPNPKFSNLLTSASDDGTIRLWE 334
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 121 (47.7 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 41/136 (30%), Positives = 62/136 (45%)
Query: 1 MPPQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
M P + GH ++ G LA+A D I + V ++ A L GHKGA+ E
Sbjct: 26 MAPTMVLQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGEC-ENFAVLKGHKGAIME 84
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA 120
V + S L S D TV +W + + I++ F+ H VNS+D + G +
Sbjct: 85 VKFNADS--SHLVSAGTDKTVRVW-DMETGSCIRN--FKSHTDIVNSVD--VNRRGPQMI 137
Query: 121 CGSSD-GNISVFTARA 135
C +SD G + V R+
Sbjct: 138 CSASDDGTVMVHDMRS 153
Score = 78 (32.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 28/121 (23%), Positives = 50/121 (41%)
Query: 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
F D + GG DN +KVW + D L H D + ++ + N G + + S
Sbjct: 171 FNDAADNVICGGIDNQIKVWDMLRN----DVRYVLSGHRDTITSLSVSHN-G---NFLLS 222
Query: 231 ASEDGKVIIWTVA------REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTL 284
S D ++ W + R +++G H+F+ + + WS N + + V +
Sbjct: 223 NSMDCSLMSWDIRPFVPAQRLVARYQG-ASHNFEKNLLKCGWSPRDNYITAGSADRFVYV 281
Query: 285 W 285
W
Sbjct: 282 W 282
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 132 (51.5 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 37/111 (33%), Positives = 59/111 (53%)
Query: 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKII-GVGNNTSQHLAKLSGHKGAVWEV 61
P+K TGH+ V+ V GK +A+AS D S+++ G+ T Q + GH G V++V
Sbjct: 352 PKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGI---TGQFVTVFRGHVGPVYQV 408
Query: 62 AWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP 112
+W+ +L S S D T+ IW E + + +D H V ++DW+P
Sbjct: 409 SWSADS--RLLLSGSKDSTLKIW-EIRTKKLKQD--LPGHADEVFAVDWSP 454
Score = 117 (46.2 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 44/153 (28%), Positives = 62/153 (40%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH + V V+ GK+LA+ S D ++++ + T K GHK V VAW+ P
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCK--GHKNWVLTVAWS-PD- 162
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP-HELGLC--LACGSSD 125
G L S S G + W ++ HK + I W P H C S D
Sbjct: 163 GKHLVSGSKSGEICCWNPKKGE--LEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKD 220
Query: 126 GNISVFTARADGGWDTSRID-QAHPVGVTSVSW 157
G+ ++ D S I H + VT V W
Sbjct: 221 GDARIW----DITLKKSIICLSGHTLAVTCVKW 249
Score = 87 (35.7 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 35/114 (30%), Positives = 52/114 (45%)
Query: 173 DPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASAS 232
D ++L SG D T+ +W+ + K L H V V ++P+ G IASAS
Sbjct: 327 DSPERLVSGSDDFTMFLWE--PSVSKQPK-KRLTGHQQLVNHVYFSPD-G---KWIASAS 379
Query: 233 EDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
D V +W G Q+ V PVY+VSWS +L ++ + +WE
Sbjct: 380 FDKSVRLWN-GITG-QFV-TVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWE 430
Score = 72 (30.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 37/138 (26%), Positives = 58/138 (42%)
Query: 154 SVSWAPS---TAPGALVGSGFLDPVQK-LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHT 209
SVS P T LV + P K + S D +V++W NGI + H
Sbjct: 347 SVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLW---NGITGQ-FVTVFRGHV 402
Query: 210 DWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLT 269
V V+W+ + L + S S+D + IW + + + + L V+ V WS
Sbjct: 403 GPVYQVSWSADSRL----LLSGSKDSTLKIWEIRTKKLKQD---LPGHADEVFAVDWSPD 455
Query: 270 GNILAVADGNNNVT-LWE 286
G + V+ G + V LW+
Sbjct: 456 GEKV-VSGGKDRVLKLWK 472
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 116 (45.9 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 46/166 (27%), Positives = 76/166 (45%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
TGH V V D + +A+ S D SI + + LSGHKGA+ ++ W+
Sbjct: 63 TGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQCENY-GILSGHKGAILDLQWSRDS 121
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
+ S S D T+ W + S + I+ ++ H+ +NS++ + + L S DG
Sbjct: 122 --KTIFSASADMTLASW-DIESGQRIRRYI--GHEEVINSVEISKRGQEM-LVSASDDGT 175
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLD 173
+ ++ R D ++ P+ T+V A S A G V SG +D
Sbjct: 176 MGIWDPRQKEAIDY--LETELPI--TAV--AQSEA-GNEVFSGGID 214
Score = 84 (34.6 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 28/113 (24%), Positives = 49/113 (43%)
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
SGG DN + VW I K ++ H D + + +P+ T+ S S D V
Sbjct: 210 SGGIDNAIHVWD----IRKKAIVYSMAGHMDTITSLEVSPD----SQTLLSNSFDSTVRT 261
Query: 240 WTVA------REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
W + R ++G + + + R SW+ G+ +A G+ +V +W+
Sbjct: 262 WDIRPFAPTNRHIRTYDGAPV-GLEKNLIRASWNPAGDKIAAGSGDRSVVVWD 313
Score = 71 (30.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 33/130 (25%), Positives = 61/130 (46%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH 65
I +GH+ + D+ K + +AS+D ++ + + Q + + GH+ + V +
Sbjct: 104 ILSGHKGAILDLQWSRDSKTIFSASADMTLASWDI--ESGQRIRRYIGHEEVINSVEIS- 160
Query: 66 PKFGS-ILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSS 124
K G +L S S DGT+ IW + E I D++ + + + ++ A E G + G
Sbjct: 161 -KRGQEMLVSASDDGTMGIW-DPRQKEAI-DYL--ETELPITAV--AQSEAGNEVFSGGI 213
Query: 125 DGNISVFTAR 134
D I V+ R
Sbjct: 214 DNAIHVWDIR 223
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 147 (56.8 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 53/196 (27%), Positives = 91/196 (46%)
Query: 10 HEDTVHDVAMDYYGKRLA-TASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
H V+ +++ RL T DY + + +G TS L GH V VA+ +
Sbjct: 14 HSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSP--MSLCGHTSPVDSVAFNSEEV 71
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
+LA S G + +W + ++ ++ F H+S+ +++++ H G LA GSSD N+
Sbjct: 72 -LVLAGAS-SGVIKLW-DLEESKMVR--AFTGHRSNCSAVEF--HPFGEFLASGSSDTNL 124
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVK 188
V+ R G T + H G++++ ++P G V SG LD V K+ +
Sbjct: 125 RVWDTRKKGCIQTYK---GHTRGISTIEFSPD---GRWVVSGGLDNVVKVWDLTAGKLLH 178
Query: 189 VWKLYNG-IWKMDCFP 203
+K + G I +D P
Sbjct: 179 EFKCHEGPIRSLDFHP 194
Score = 61 (26.5 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 24/83 (28%), Positives = 34/83 (40%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG-K 236
L +G D TVK W L + + VR +A+ P+ G T+ +DG K
Sbjct: 199 LATGSADRTVKFWDLET----FELIGTTRPEATGVRAIAFHPD-G---QTLFCGLDDGLK 250
Query: 237 VIIW--TVAREGDQWEGKVLHDF 257
V W + R+G L DF
Sbjct: 251 VYSWEPVICRDGVDMGWSTLGDF 273
>UNIPROTKB|G4MUS8 [details] [associations]
symbol:MGG_01677 "Nuclear pore complex subunit"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:CM001232
KO:K14299 RefSeq:XP_003714665.1 EnsemblFungi:MGG_01677T0
GeneID:2679619 KEGG:mgr:MGG_01677 Uniprot:G4MUS8
Length = 455
Score = 116 (45.9 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 27/85 (31%), Positives = 42/85 (49%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTS-QHLAKLSGHKGAVWEVA 62
Q ++ GH+D V VA + YG R T S D I++ + +H + H G + E+
Sbjct: 19 QIMKHGHQDLVQAVAFNSYGDRCTTGSVDGKIRVFNRHQDGIWRHCDNWTAHGGEILELQ 78
Query: 63 WAHPK-FGSILASCSFDGTVIIWKE 86
W P + ++LAS DG +W E
Sbjct: 79 WLPPTIYPNLLASLGIDGRFKLWAE 103
Score = 76 (31.8 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 22/54 (40%), Positives = 27/54 (50%)
Query: 205 LQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVL--HD 256
+Q H VRDVAWAP IASA +DG V + + D +GK HD
Sbjct: 259 VQGHRGLVRDVAWAPGNIRGYDIIASACQDGFVRVMRLETPFDPNDGKTWSEHD 312
Score = 45 (20.9 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 254 LHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287
L +TPV+RV + G IL + L+ +
Sbjct: 400 LDSHRTPVWRVGFDDDGQILGSVGDEGRLLLYRQ 433
Score = 41 (19.5 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 99 EDHKSSVNSIDWAPHEL-GL-CLACGSSDGNISV 130
+ H+ V + WAP + G +A DG + V
Sbjct: 260 QGHRGLVRDVAWAPGNIRGYDIIASACQDGFVRV 293
Score = 38 (18.4 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 15/49 (30%), Positives = 20/49 (40%)
Query: 146 QAHPVGVTSVSWAPSTAPGA-LVGSGFLDP---VQKLCSGGCDNTVKVW 190
Q H V V+WAP G ++ S D V +L + N K W
Sbjct: 260 QGHRGLVRDVAWAPGNIRGYDIIASACQDGFVRVMRLETPFDPNDGKTW 308
>TAIR|locus:2123752 [details] [associations]
symbol:AT4G32990 "AT4G32990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 IPI:IPI00532927 RefSeq:NP_195025.5 UniGene:At.54584
ProteinModelPortal:F4JVW1 SMR:F4JVW1 EnsemblPlants:AT4G32990.1
GeneID:829436 KEGG:ath:AT4G32990 OMA:WKLASEP Uniprot:F4JVW1
Length = 328
Score = 155 (59.6 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 75/283 (26%), Positives = 115/283 (40%)
Query: 46 QHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE------------------- 86
+ + KL GH VW VAW +P ++ASCS D TV IW++
Sbjct: 11 EEVQKLEGHTDRVWNVAW-NPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHRLGSFD 69
Query: 87 GNSNEW---IKDH----VFEDHKSSVNSIDWAPHELGLCLA-CGSSDGNISVFTARA--D 136
GN+ W D V H+S V S+ W + G LA CG D ++ ++ + D
Sbjct: 70 GNTCVWENFATDSESVSVLRGHESEVKSVSW--NASGSLLATCGR-DKSVWIWEIQPEED 126
Query: 137 GGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGI 196
+DT + H V V W P+ +D V CS DNT+K+W +
Sbjct: 127 DEFDTIAVLTGHSEDVKMVLWHPT-----------MD-VLFSCS--YDNTIKIWCSEDED 172
Query: 197 WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW-TVAREGDQWEGKV-- 253
+C L + W+ + + + S+D V IW T EG V
Sbjct: 173 GDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVTCSDDLAVKIWKTDISRMQSGEGYVPW 232
Query: 254 --------LHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288
HD +T +Y V WS G ++A G++ + L+ ++
Sbjct: 233 THVCTLSGFHD-RT-IYSVHWSRDG-VIASGAGDDTIQLFVDS 272
Score = 140 (54.3 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 68/255 (26%), Positives = 105/255 (41%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQH---LAKLSGHKGAVWEVAWAH 65
GHE V V+ + G LAT D S+ I + +A L+GH V V W H
Sbjct: 90 GHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLW-H 148
Query: 66 PKFGSILASCSFDGTVIIW----KEGNSN--EWIKDHVFEDHKSSVNSIDWAPHELGLCL 119
P +L SCS+D T+ IW ++G+ N + + + + H S+V SI + + G +
Sbjct: 149 PTM-DVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSE-LNNGHSSTVWSISF--NAAGDKM 204
Query: 120 ACGSSDGNISVFT---ARADGG-----WD-TSRIDQAHPVGVTSVSWAPSTAPGALVGSG 170
S D + ++ +R G W + H + SV W+ G +
Sbjct: 205 VTCSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGFHDRTIYSVHWSRD---GVIASGA 261
Query: 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
D +Q D+ Y + K + + H V V WAP+ +AS
Sbjct: 262 GDDTIQLFVDSDSDSVDG--PSYKLLVKKE-----KAHEMDVNSVQWAPDK--ESRLLAS 312
Query: 231 ASEDGKVIIWTVARE 245
AS+D V IW +A E
Sbjct: 313 ASDDKMVKIWKLASE 327
Score = 117 (46.2 bits), Expect = 0.00019, P = 0.00019
Identities = 37/143 (25%), Positives = 67/143 (46%)
Query: 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKI---------IGVGNNTSQHLAKLSG-H 54
++ GH TV ++ + G ++ T S D ++KI G G H+ LSG H
Sbjct: 183 ELNNGHSSTVWSISFNAAGDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGFH 242
Query: 55 KGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEW----IKDHVFED--HKSSVNSI 108
++ V W+ ++AS + D T+ ++ + +S+ K V ++ H+ VNS+
Sbjct: 243 DRTIYSVHWSRD---GVIASGAGDDTIQLFVDSDSDSVDGPSYKLLVKKEKAHEMDVNSV 299
Query: 109 DWAPHELGLCLACGSSDGNISVF 131
WAP + LA S D + ++
Sbjct: 300 QWAPDKESRLLASASDDKMVKIW 322
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 158 (60.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 49/150 (32%), Positives = 71/150 (47%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D V V + + LA+AS D ++KI G + QH L GH+ V V ++H
Sbjct: 377 GHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHT--LEGHRDWVRSVIFSHDS- 433
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
+LAS S D TV IW G + H E H+ V S+ ++ H+ L LA S D +
Sbjct: 434 -QLLASASDDSTVKIWDTGTGS---LQHTLEGHRDWVRSVIFS-HDSRL-LASASDDRTV 487
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWA 158
++ T + H VTSVS++
Sbjct: 488 RIWDTEKGSHKHTL---EGHSSLVTSVSFS 514
Score = 151 (58.2 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 45/128 (35%), Positives = 65/128 (50%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D V V + + LA+AS D ++KI G + QH L GH+ V V ++H
Sbjct: 419 GHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHT--LEGHRDWVRSVIFSHDS- 475
Query: 69 GSILASCSFDGTVIIWK-EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
+LAS S D TV IW E S++ H E H S V S+ ++ H+ L LA S+D
Sbjct: 476 -RLLASASDDRTVRIWDTEKGSHK----HTLEGHSSLVTSVSFS-HDSRL-LASASNDQT 528
Query: 128 ISVFTARA 135
+ ++ A
Sbjct: 529 VRIWDIEA 536
Score = 147 (56.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 42/123 (34%), Positives = 61/123 (49%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D V V + + LA+AS D ++KI G + QH L GH+ V V ++H
Sbjct: 336 GHSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQHT--LEGHRDWVRSVIFSHDS- 391
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
+LAS S D TV IW G + H E H+ V S+ ++ H+ L LA S D +
Sbjct: 392 -QLLASASDDSTVKIWDTGTGS---LQHTLEGHRDWVRSVIFS-HDSQL-LASASDDSTV 445
Query: 129 SVF 131
++
Sbjct: 446 KIW 448
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 74/274 (27%), Positives = 115/274 (41%)
Query: 40 VGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFE 99
V N+ S L L GH+ AV V+++H +LAS S D TV IW + H E
Sbjct: 281 VANHWSPCLQALEGHEAAVLSVSYSHDS--RLLASASDDRTVKIWDTETGS---LQHTLE 335
Query: 100 DHKSSVNSIDWAPHELGLCLACGSSDGNISVF---------TARADGGWDTSRIDQAHPV 150
H V S+ ++ H+ L LA +SD + ++ T W S I
Sbjct: 336 GHSDLVRSVIFS-HDSRL-LA-SASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ 392
Query: 151 GVTSVS-------WAPSTAPGALVGS--GFLDPVQ--------KLCSGGCDNTVKVWKLY 193
+ S S W T G+L + G D V+ +L + D++ K++
Sbjct: 393 LLASASDDSTVKIW--DTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTV--KIW 448
Query: 194 N-GIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGK 252
+ G + L+ H DWVR V ++ + L +ASAS+D V IW + +
Sbjct: 449 DTGTGSLQ--HTLEGHRDWVRSVIFSHDSRL----LASASDDRTVRIWDTEKGSHK---H 499
Query: 253 VLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
L + V VS+S +LA A + V +W+
Sbjct: 500 TLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWD 533
Score = 38 (18.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 165 ALVGS-GFLDPVQKLCSGGCDNTVKVWKL 192
+LV S F + L S D TV++W +
Sbjct: 506 SLVTSVSFSHDSRLLASASNDQTVRIWDI 534
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 136 (52.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 39/125 (31%), Positives = 63/125 (50%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
TGH+ ++ V+ G+ A+AS D SIK+ + + L GH GAV++V W+
Sbjct: 391 TGHQQLINLVSFSPDGRYFASASFDKSIKLWD--GQSGKFLGNFRGHVGAVYQVCWSSDS 448
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
L S S D T+ IW + + + K+ H V ++DW+P G +A GS D
Sbjct: 449 --RYLVSGSKDSTLKIW-DIKTKKMEKE--LPGHADEVYTVDWSPD--GDRVASGSKDRL 501
Query: 128 ISVFT 132
+ ++T
Sbjct: 502 LRIWT 506
Score = 116 (45.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 40/158 (25%), Positives = 61/158 (38%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
+GH + V + A GK + D +++I + +T H K GH V +VAW+ P
Sbjct: 137 SGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLK--GHTNWVLQVAWS-PD 193
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELG-LC--LACGSS 124
I A+ +G + IW + + H + + W P L C LA S
Sbjct: 194 SKKI-ATAGMEGDIRIWCPQTGKQL--GSTLKGHTKFITGLSWEPFHLNPKCVRLASSSK 250
Query: 125 DGNISVFTARADGGWDTSRIDQ-----AHPVGVTSVSW 157
D I + WDT H + VT + W
Sbjct: 251 DSTIRI--------WDTESCKNLMSLSGHTMSVTCLKW 280
Score = 84 (34.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
L SG D+T+K+W + KM+ L H D V V W+P+ G +AS S+D +
Sbjct: 451 LVSGSKDSTLKIWDIKTK--KME--KELPGHADEVYTVDWSPD-G---DRVASGSKDRLL 502
Query: 238 IIWTV 242
IWTV
Sbjct: 503 RIWTV 507
Score = 73 (30.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 31/112 (27%), Positives = 48/112 (42%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
L SG D TV +W + K L H + V+++P+ G ASAS D +
Sbjct: 366 LISGSDDFTVIMWN--PSVTKTS-ISRLTGHQQLINLVSFSPD-G---RYFASASFDKSI 418
Query: 238 IIWTVAREGDQWEGKVLHDFKT---PVYRVSWSLTGNILAVADGNNNVTLWE 286
+W D GK L +F+ VY+V WS L ++ + +W+
Sbjct: 419 KLW------DGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWD 464
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 151 (58.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 57/171 (33%), Positives = 77/171 (45%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
+GH D + G +LAT+S D +IK+ + N + L GH AVW W H
Sbjct: 399 SGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDL--NKGECTLTLEGHNHAVWSCTW-H-S 454
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G +AS S D T IW + NS + H SVNSI++ P L A S+D
Sbjct: 455 CGDFVASASLDMTSKIW-DVNSERC--RYTLYGHTDSVNSIEFFPFSNILLTA--SADKT 509
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
+SV+ AR G + S H SV+ A T G ++ S V KL
Sbjct: 510 LSVWDART-GKCEQSLYGHMH-----SVNDATFTPRGHIIASCDARGVTKL 554
Score = 47 (21.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 176 QKLCSGGCDNTVKVW 190
+ L SGG D T+++W
Sbjct: 624 ENLYSGGSDGTIRLW 638
>ZFIN|ZDB-GENE-041014-277 [details] [associations]
symbol:wdr26b "WD repeat domain 26b" species:7955
"Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-041014-277 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AL929435 HSSP:P16649
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX004824 IPI:IPI00504405 RefSeq:NP_001189371.1
UniGene:Dr.156389 UniGene:Dr.79849 ProteinModelPortal:Q5SP67
PRIDE:Q5SP67 Ensembl:ENSDART00000029894 GeneID:564794
KEGG:dre:564794 CTD:564794 HOGENOM:HOG000160946 HOVERGEN:HBG083958
InParanoid:Q5SP67 OMA:IRGQFYQ OrthoDB:EOG4GHZNV NextBio:20885564
Bgee:Q5SP67 Uniprot:Q5SP67
Length = 576
Score = 122 (48.0 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 43/168 (25%), Positives = 85/168 (50%)
Query: 1 MPPQKIETGHEDTVHDVAMD---YYGKRLATASSDYSIKIIGVGNNT-----SQHLAKLS 52
+PP++++T V ++ D Y+ +L ++ S+ + V + +Q + L+
Sbjct: 208 LPPRRLQTLLRQAV-ELQRDRCLYHNTKLDSSLDSVSLLLDHVCSRKQFPCYTQQI--LT 264
Query: 53 GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK-EGNSNEWIKDHVFEDHKSSVNSIDWA 111
H VW +++ G+ LA+ S D TVIIW+ E ++++ E H V+ + W+
Sbjct: 265 EHCNEVWFCKFSND--GTKLATGSKDTTVIIWQVEPDTHQLKLLRTLEGHAYGVSYLAWS 322
Query: 112 PHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 159
P ++ L +ACG D + ++ G +++ Q+H +TSV+W P
Sbjct: 323 PDDVYL-IACGPDDCS-ELWLWNVQTGELRTKMSQSHEDSLTSVAWNP 368
Score = 76 (31.8 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQM--HTDWVRDVAWAPNLGLPKSTIASASEDG 235
+ SG D+ V +W K P +++ HT V V+W P + P S +ASAS+DG
Sbjct: 498 IASGSEDHKVYIWH------KRSELPIVELTGHTRTVNCVSWNPCI--P-SLMASASDDG 548
Query: 236 KVIIW 240
V IW
Sbjct: 549 TVRIW 553
>SGD|S000001885 [details] [associations]
symbol:CDC4 "F-box protein required for G1/S and G2/M
transition" species:4932 "Saccharomyces cerevisiae" [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IGI;IMP]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043224 "nuclear SCF
ubiquitin ligase complex" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0007126 "meiosis" evidence=IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0030435 "sporulation resulting in
formation of a cellular spore" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 SGD:S000001885 GO:GO:0007126 GO:GO:0000086
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:D50617 EMBL:BK006940
SUPFAM:SSF81383 GO:GO:0030435 GO:GO:0016363 GO:GO:0042787
GO:GO:0043130 EMBL:Z46255 GeneTree:ENSGT00550000075528
GO:GO:0031146 EMBL:X05625 PIR:S56245 RefSeq:NP_116585.1 PDB:1NEX
PDB:2P63 PDB:3MKS PDB:3V7D PDBsum:1NEX PDBsum:2P63 PDBsum:3MKS
PDBsum:3V7D ProteinModelPortal:P07834 SMR:P07834 DIP:DIP-1625N
IntAct:P07834 MINT:MINT-389524 STRING:P07834 PaxDb:P07834
PRIDE:P07834 EnsemblFungi:YFL009W GeneID:850539 KEGG:sce:YFL009W
CYGD:YFL009w HOGENOM:HOG000111495 KO:K03361 OMA:VVTCLQH
OrthoDB:EOG4B2X5M EvolutionaryTrace:P07834 NextBio:966298
Genevestigator:P07834 GermOnline:YFL009W GO:GO:0043224
Uniprot:P07834
Length = 779
Score = 155 (59.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 66/248 (26%), Positives = 103/248 (41%)
Query: 3 PQKIET-GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEV 61
PQ+ GH +V + + + T + D I++ N + L +LSGH G VW +
Sbjct: 372 PQRTTLRGHMTSVI-TCLQFEDNYVITGADDKMIRVYDSINK--KFLLQLSGHDGGVWAL 428
Query: 62 AWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLAC 121
+AH G IL S S D TV +W + + HVF+ H S+V +D ++ +
Sbjct: 429 KYAH---GGILVSGSTDRTVRVW---DIKKGCCTHVFKGHNSTVRCLDIVEYKNIKYIVT 482
Query: 122 GSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFLDPVQKLC 179
GS D + V+ + + +P+ V P P VG G + V+ +
Sbjct: 483 GSRDNTLHVWKLPKESSVPDHGEEHDYPL----VFHTPEENP-YFVGVLRGHMASVRTVS 537
Query: 180 -------SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASAS 232
SG DNT+ VW + +M C L HTD + + + SAS
Sbjct: 538 GHGNIVVSGSYDNTLIVWD----VAQMKCLYILSGHTDRIYSTIYDHE----RKRCISAS 589
Query: 233 EDGKVIIW 240
D + IW
Sbjct: 590 MDTTIRIW 597
>DICTYBASE|DDB_G0276423 [details] [associations]
symbol:hira "histone cell cycle regulation defective
homolog A" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007110 InterPro:IPR011494 InterPro:IPR015943
InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569 Pfam:PF09453
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0276423 GO:GO:0005634 GO:GO:0003714
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GenomeReviews:CM000151_GR
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
EMBL:AAFI02000015 KO:K11293 RefSeq:XP_643117.1
ProteinModelPortal:Q86HX1 STRING:Q86HX1 EnsemblProtists:DDB0233325
GeneID:8620522 KEGG:ddi:DDB_G0276423 OMA:DIHPDES
ProtClustDB:CLSZ2497234 Uniprot:Q86HX1
Length = 1114
Score = 156 (60.0 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 46/135 (34%), Positives = 69/135 (51%)
Query: 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNN------TSQH---LAKLSGHKG 56
IE H +V+ V GK LA+ S D I G+ NN T+++ +A L GH
Sbjct: 63 IENAHFHSVNSVKWSKDGKYLASGSDDKLCMIWGLSNNNSLLKNTTENWVCVATLRGHAS 122
Query: 57 AVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELG 116
+ EV+W+ P +A+CSFD ++IIW E N + + E+HK V + W P LG
Sbjct: 123 DISEVSWS-PD-NKYIATCSFDKSIIIW-ETNKFQMVSK--LEEHKGFVKGLTWDP--LG 175
Query: 117 LCLACGSSDGNISVF 131
LA S D ++ ++
Sbjct: 176 RYLASQSEDKSLIIW 190
Score = 141 (54.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 66/238 (27%), Positives = 100/238 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH + +V+ K +AT S D SI II N Q ++KL HKG V + W P
Sbjct: 119 GHASDISEVSWSPDNKYIATCSFDKSI-IIWE-TNKFQMVSKLEEHKGFVKGLTW-DP-L 174
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVF-EDHKSSVNSI----DWAPHELGLCLACGS 123
G LAS S D ++IIW+ +++W+ + + E K S NS W P + G
Sbjct: 175 GRYLASQSEDKSLIIWR---TSDWVVETIVTEPFKHSGNSFFLRPSWTPDGQFIVATHGI 231
Query: 124 SDG-NISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS-- 180
++ + V +R D WD H V VS S + F QK C
Sbjct: 232 NNATHTGVLVSRTD--WDIGLDLVGHRKAVV-VSRCSSK-----IYKDFKSRDQKFCLIL 283
Query: 181 -GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
GG D+T+ +W + + ++D++W + G + + S DG V
Sbjct: 284 LGGQDSTLSLWSSSS---PRSLMVTRSLFDQCIQDISWCSD-GY---SFVACSTDGTV 334
Score = 119 (46.9 bits), Expect = 0.00065, P = 0.00065
Identities = 54/193 (27%), Positives = 79/193 (40%)
Query: 104 SVNSIDWAPHELGLCLACGSSDGNISVFT--------ARADGGWDT--SRIDQAHPVGVT 153
S+ SID P G +A G D I +++ A D G I+ AH V
Sbjct: 15 SIYSIDIHPD--GTRVATGGGDAKIKIWSMAPISLLEAEEDAGIPKLLCSIENAHFHSVN 72
Query: 154 SVSWAPSTAPGALVGSGFLDPVQKLCS-GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWV 212
SV W+ G + SG D KLC G N + K W C L+ H +
Sbjct: 73 SVKWSKD---GKYLASGSDD---KLCMIWGLSNNNSLLKNTTENWV--CVATLRGHASDI 124
Query: 213 RDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNI 272
+V+W+P+ IA+ S D +IIW + Q K L + K V ++W G
Sbjct: 125 SEVSWSPD----NKYIATCSFDKSIIIWETNKF--QMVSK-LEEHKGFVKGLTWDPLGRY 177
Query: 273 LAVADGNNNVTLW 285
LA + ++ +W
Sbjct: 178 LASQSEDKSLIIW 190
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 106 (42.4 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 34/127 (26%), Positives = 61/127 (48%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
TGH + + G ++AT+S+D ++ + + N + + + H V VAW+ PK
Sbjct: 15 TGHSGGITQLRFGPDGAQIATSSTDSTVILWNL--NQAARCIRFASHSAPVNGVAWS-PK 71
Query: 68 FGSILASCSFDGTVIIWK---EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSS 124
G+++AS D TV IW+ G S E++ H +V S+D+ G + S
Sbjct: 72 -GNLVASAGHDRTVKIWEPKLRGVSGEFVA------HSKAVRSVDF--DSTGHLMLTASD 122
Query: 125 DGNISVF 131
D + ++
Sbjct: 123 DKSAKIW 129
Score = 97 (39.2 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 30/106 (28%), Positives = 50/106 (47%)
Query: 52 SGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWA 111
+GH G + ++ + P G+ +A+ S D TVI+W N N+ + F H + VN + W+
Sbjct: 15 TGHSGGITQLRFG-PD-GAQIATSSTDSTVILW---NLNQAARCIRFASHSAPVNGVAWS 69
Query: 112 PHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSW 157
P G +A D + ++ + G S AH V SV +
Sbjct: 70 PK--GNLVASAGHDRTVKIWEPKLRG---VSGEFVAHSKAVRSVDF 110
Score = 87 (35.7 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 27/104 (25%), Positives = 51/104 (49%)
Query: 184 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D + K+W+ + + + +WVR ++PN L +A+AS+D V I+ V
Sbjct: 123 DKSAKIWR----VARRQFVSSFAQQNNWVRSAKFSPNGKL----VATASDDKSVRIYDV- 173
Query: 244 REGDQWEG-KVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
D E + + + +++W GN+LAVA G N + +++
Sbjct: 174 ---DSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFD 214
Score = 50 (22.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
L SG D T+++ L G + L HTD V VA++ + G A+ D ++
Sbjct: 243 LLSGSDDRTIRILDLLEG---RPIY-TLTGHTDAVNAVAFSRD-G---DKFATGGSDRQL 294
Query: 238 IIW 240
++W
Sbjct: 295 LVW 297
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 115 (45.5 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 53/199 (26%), Positives = 80/199 (40%)
Query: 1 MPPQKIETGHEDTVHDVAMD--YYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAV 58
+P +++E E+++H + D + L + S YS G SQ L H V
Sbjct: 219 IPEKRLECLVENSLH-IQRDSCVFHNTLDSDLSLYSDHQCGKHQIPSQTAQILESHTDEV 277
Query: 59 WEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLC 118
W + ++H G LAS S D T IIW+ H H V +I W+P + +
Sbjct: 278 WFLQFSHN--GKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQV- 334
Query: 119 LACGSSDGNISVFTARADGGWDTSRIDQAHPV---GVTSVS--WAPSTAPGALVGSGFLD 173
L CG+ + R WD D H G++ +S W P G + +G D
Sbjct: 335 LTCGAEE------VIRR---WDVDSGDCVHMYEKGGISPISCGWYPD---GQGIIAGMTD 382
Query: 174 PVQKLCSGGCDNTVK-VWK 191
+ +C D K WK
Sbjct: 383 --RSICMWDLDGREKECWK 399
Score = 81 (33.6 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 27/78 (34%), Positives = 39/78 (50%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAP-NLGLPKSTIASASEDGK 236
+ SG D+ V +W G K+ L H V V+W+P NL + +ASAS+DG
Sbjct: 504 IASGSEDSQVYIWHRSTG--KL--IVELPGHAGAVNCVSWSPTNLHM----LASASDDGT 555
Query: 237 VIIWTVAREGDQWEGKVL 254
+ IW + R Q + K L
Sbjct: 556 IRIWGLDRINQQNQKKKL 573
Score = 65 (27.9 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 222 GLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKT---PVYRVSWSLTG-NILAVAD 277
G ++ IAS SED +V IW + GK++ + V VSWS T ++LA A
Sbjct: 498 GYKQAFIASGSEDSQVYIW------HRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASAS 551
Query: 278 GNNNVTLW 285
+ + +W
Sbjct: 552 DDGTIRIW 559
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 149 (57.5 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 55/199 (27%), Positives = 87/199 (43%)
Query: 1 MPPQKIETGHEDTVHDVAMD-YYGKRLATASSDYSIKIIGVG-NNTSQHLAKLSG-HKGA 57
+ P + T H V+DV + + T S D +++I+ T++ A G H+ A
Sbjct: 204 LQPVRTYTHHSSIVNDVQHHPLHSSLIGTVSDDITLQILDTRVAETTRAAATAEGQHRDA 263
Query: 58 VWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGL 117
+ +A+ +P ++LA+ S D T+ +W N K H E+H SV SI W P E +
Sbjct: 264 INAIAF-NPAAETVLATGSADKTIGLWDLRNLKT--KLHTLENHTDSVTSISWHPFEEAV 320
Query: 118 CLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK 177
LA S D I + G T Q P + + + S L+
Sbjct: 321 -LASASYDRKIMFWDLSRAGEEQTPEDAQDGPPELLFMHGGHTNRISDF--SWNLNDPWV 377
Query: 178 LCSGGCDNTVKVWKLYNGI 196
LCS DN ++VWK+ + I
Sbjct: 378 LCSAAEDNLLQVWKVADAI 396
Score = 112 (44.5 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
L +G D T+ +W L N K+ L+ HTD V ++W P ++ +ASAS D K+
Sbjct: 277 LATGSADKTIGLWDLRNLKTKLH---TLENHTDSVTSISWHP---FEEAVLASASYDRKI 330
Query: 238 IIWTVAREGDQ 248
+ W ++R G++
Sbjct: 331 MFWDLSRAGEE 341
Score = 40 (19.1 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 101 HKSSVNSIDWAPHELGLCLACG 122
HK + W+PH G LA G
Sbjct: 171 HKQEGFGLSWSPHVAGH-LATG 191
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 149 (57.5 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 70/250 (28%), Positives = 104/250 (41%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH + V D+ D G LA+ S+D +IK+ T + L GH V V + P
Sbjct: 146 GHTNAVQDIDFDKTGNLLASCSADLTIKLWDF--QTYDCVKTLHGHDHNVSCVRFT-PS- 201
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G L S S D T+ +W E + IK V H+ V I + E G C+A S+D I
Sbjct: 202 GDQLISSSRDKTIKVW-EAATGYCIKTLV--GHEDWVRKITVS--EDGSCIASCSNDQTI 256
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPST-APGALV-------------GSGFLDP 174
+ T R + +H V + S A PG+L+ G +
Sbjct: 257 KTWNIVKGECLATYR-EHSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQ 315
Query: 175 VQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASED 234
L +G D T+K+W+L G C H +WVR V + P G + S +D
Sbjct: 316 CGYLATGSRDKTIKIWELATG----RCLATYIGHDNWVRAVRFHP-CG---KFLLSVGDD 367
Query: 235 GKVIIWTVAR 244
+ +W +A+
Sbjct: 368 KTIRVWDIAQ 377
Score = 120 (47.3 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 39/133 (29%), Positives = 65/133 (48%)
Query: 2 PPQK-IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
PP+K I TGH + ++ V + +AS D +IK+ + + K GH AV +
Sbjct: 96 PPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLK--GHTNAVQD 153
Query: 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA 120
+ + K G++LASCS D T+ +W + + + +K H +V+ + + P G L
Sbjct: 154 IDF--DKTGNLLASCSADLTIKLW-DFQTYDCVK--TLHGHDHNVSCVRFTPS--GDQLI 206
Query: 121 CGSSDGNISVFTA 133
S D I V+ A
Sbjct: 207 SSSRDKTIKVWEA 219
Score = 53 (23.7 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 178 LCSGGCDNTVKVWKL 192
+ +GG D+ +KVWKL
Sbjct: 404 IATGGVDDVIKVWKL 418
Score = 48 (22.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPAL-QMHTDWVRDVAWAPNLGLPKSTIASASEDGK 236
L S G D T++VW + G C + + HT ++ + + L IA+ D
Sbjct: 361 LLSVGDDKTIRVWDIAQG----RCIKTINEAHTHFISCLDFC----LHNPHIATGGVDDV 412
Query: 237 VIIW 240
+ +W
Sbjct: 413 IKVW 416
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 126 (49.4 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 39/124 (31%), Positives = 54/124 (43%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDW 110
L GH G V+ + W K + + S S DG +I+W S K H + H V + +
Sbjct: 62 LQGHSGKVYSLDWTPEK--NWIVSASQDGRLIVWNALTSQ---KTHAIKLHCPWVMTCAF 116
Query: 111 APHELGLCLACGSSDGNISVFT----ARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL 166
AP+ G +ACG D S+F A DG SRI H V+S + P +
Sbjct: 117 APN--GQSVACGGLDSACSIFNLNSQADRDGNIPVSRILTGHKGYVSSCQYVPDQETRLI 174
Query: 167 VGSG 170
SG
Sbjct: 175 TSSG 178
Score = 62 (26.9 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 26/112 (23%), Positives = 50/112 (44%)
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
SG CD TV++W + + + H + V + P+ G + S+DG +
Sbjct: 223 SGSCDATVRLWDIRIASRAVRTYHG---HEGDINSVKFFPD-G---QRFGTGSDDGTCRL 275
Query: 240 WTVAREGDQWE----GKVLHDFKTP-VYRVSWSLTGNILAVADGNNNVTLWE 286
+ V R G Q + +D + P V +++S++G +L N + +W+
Sbjct: 276 FDV-RTGHQLQVYSREPDRNDNELPTVTSIAFSISGRLLFAGYSNGDCYVWD 326
>UNIPROTKB|Q2TBM8 [details] [associations]
symbol:WDR26 "WD repeat domain 26" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOGENOM:HOG000160946 HOVERGEN:HBG083958 OMA:IRGQFYQ
OrthoDB:EOG4GHZNV CTD:80232 EMBL:DAAA02042638 EMBL:BC109897
IPI:IPI00702354 RefSeq:NP_001070527.1 UniGene:Bt.21955
Ensembl:ENSBTAT00000034200 GeneID:767999 KEGG:bta:767999
InParanoid:Q2TBM8 NextBio:20918354 Uniprot:Q2TBM8
Length = 514
Score = 116 (45.9 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 45/168 (26%), Positives = 80/168 (47%)
Query: 1 MPPQKIETGHEDTVHDVAMD---YYGKRLATASSDYSIKIIGVGNNT-----SQHLAKLS 52
+PP++++T V ++ D Y+ +L + S+ I V + +Q + L+
Sbjct: 149 LPPRRLQTLLRQAV-ELQRDRCLYHNTKLDSNLDSVSLLIDHVCSRRQFPCYTQQI--LT 205
Query: 53 GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKD-HVFEDHKSSVNSIDWA 111
H VW +++ G+ LA+ S D TVIIW+ +K E H V+ I W+
Sbjct: 206 EHCNEVWFCKFSND--GTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWS 263
Query: 112 PHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 159
P + L +ACG D + ++ G +++ Q+H +TSV+W P
Sbjct: 264 PDDNYL-VACGPDDCS-ELWLWNVQTGELRTKMSQSHEDSLTSVAWNP 309
Score = 77 (32.2 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQM--HTDWVRDVAWAPNLGLPKSTIASASEDG 235
+ SG D+ V +W K P ++ HT V V+W P + P S +ASAS+DG
Sbjct: 439 IASGSEDHKVYIWH------KRSELPIAELTGHTRTVNCVSWNPQI--P-SMMASASDDG 489
Query: 236 KVIIW 240
V IW
Sbjct: 490 TVRIW 494
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 149 (57.5 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 55/203 (27%), Positives = 88/203 (43%)
Query: 101 HKSSVNSIDWAP-HELGLCLACGSSDGNISVFTARADGGWDT-SRIDQAHPVGVTSVSWA 158
HKS ++DW+P H LG L G +DG I V T GGW T +R + H V + W+
Sbjct: 254 HKSEGYALDWSPLHPLGKLLT-GDNDGLIYVTTRTEGGGWVTDTRAFRGHASSVEELQWS 312
Query: 159 PSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQM---HTDWVRDV 215
P+ S D TVKVW + + PA+ + +TD V +
Sbjct: 313 PNEK-------------NVFASASSDGTVKVWDVRS----KSRSPAVNVKISNTD-VNVM 354
Query: 216 AWAPNLGLPKSTIASASEDGKVIIWTVA--REGDQWEGKVL------HDF-KTPVYRVSW 266
W+ +A+ ++DG+ +W + + + +F K P+ + W
Sbjct: 355 TWSKQTS---HLLATGADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEW 411
Query: 267 SLTGN-ILAVADGNNNVTLWEEA 288
T + ++AV +N VTLW+ A
Sbjct: 412 HPTDDSVIAVGSADNTVTLWDLA 434
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 52/216 (24%), Positives = 92/216 (42%)
Query: 43 NTSQHLAKLSGHKGAVWEVAWA--HPKFGSILASCSFDGTVIIWKEGNSNEWIKD-HVFE 99
+ S+ L+ L HK + + W+ HP G +L + DG + + W+ D F
Sbjct: 243 SASKPLSTLRMHKSEGYALDWSPLHP-LGKLLTGDN-DGLIYVTTRTEGGGWVTDTRAFR 300
Query: 100 DHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 159
H SSV + W+P+E + A SSDG + V+ R+ + ++ V ++W+
Sbjct: 301 GHASSVEELQWSPNEKNV-FASASSDGTVKVWDVRSKSRSPAVNVKISN-TDVNVMTWSK 358
Query: 160 STAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLY-NGIWKMDCFP--ALQMHTDWVRDVA 216
T+ L+ +G D + ++ WK + + P + H + + +
Sbjct: 359 QTSH--LLATGADDGQWAVWD------LRHWKPNPSSSAPITASPVASFNFHKEPITSIE 410
Query: 217 WAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGK 252
W P S IA S D V +W +A E D+ E +
Sbjct: 411 WHPT---DDSVIAVGSADNTVTLWDLAVELDEEESR 443
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 129 (50.5 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 50/174 (28%), Positives = 73/174 (41%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH + V G+ LA+ S D +++I + H K HK V +AW+ P
Sbjct: 103 GHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCK--SHKSWVLCIAWS-PDA 159
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP-HELGLC--LA-CGSS 124
I ++C +G + IW + E I + HK + S+ W P H+ C LA CG
Sbjct: 160 TKIASACK-NGEICIWN-AKTGEQI-GKTLKRHKQWITSLAWQPMHKDPTCRLLASCGK- 215
Query: 125 DGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
DGNI ++ G R H VT + W L+ SG D K+
Sbjct: 216 DGNIFIWDT-VQG--TVVRCLSGHTASVTCLRWGGE----GLIYSGSQDRTVKM 262
Score = 124 (48.7 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 38/118 (32%), Positives = 58/118 (49%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
TGH V+ V + +A+AS D S+K+ G T ++LA L GH G V++VAW+
Sbjct: 357 TGHMQLVNQVVFSPDTRYIASASFDKSVKL-WCGR-TGKYLASLRGHVGPVYQVAWSADS 414
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
+L S S D T+ ++ E + D H V ++DW+P G + G D
Sbjct: 415 --RLLVSGSADSTLKVF-ELKTKSLYYD--LPGHGDEVFTVDWSPE--GTKVVSGGKD 465
Score = 61 (26.5 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 28/118 (23%), Positives = 50/118 (42%)
Query: 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
F + + S D +VK+W G + +L+ H V VAW+ + L + S
Sbjct: 368 FSPDTRYIASASFDKSVKLWCGRTGKY----LASLRGHVGPVYQVAWSADSRL----LVS 419
Query: 231 ASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVT-LWEE 287
S D + ++ + + ++ L V+ V WS G + V+ G + V LW +
Sbjct: 420 GSADSTLKVFELKTKSLYYD---LPGHGDEVFTVDWSPEGTKV-VSGGKDKVLKLWRQ 473
>UNIPROTKB|F1PIR1 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:AAEX03005292
RefSeq:XP_003434930.1 ProteinModelPortal:F1PIR1
Ensembl:ENSCAFT00000025923 GeneID:480115 KEGG:cfa:480115
Uniprot:F1PIR1
Length = 514
Score = 115 (45.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 45/168 (26%), Positives = 79/168 (47%)
Query: 1 MPPQKIETGHEDTVHDVAMD---YYGKRLATASSDYSIKIIGVGNNT-----SQHLAKLS 52
+PP++++T V ++ D Y+ +L S+ I V + +Q + L+
Sbjct: 149 LPPRRLQTLLRQAV-ELQRDRCLYHNTKLDNNLDSVSLLIDHVCSRRQFPCYTQQI--LT 205
Query: 53 GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKD-HVFEDHKSSVNSIDWA 111
H VW +++ G+ LA+ S D TVIIW+ +K E H V+ I W+
Sbjct: 206 EHCNEVWFCKFSND--GTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWS 263
Query: 112 PHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 159
P + L +ACG D + ++ G +++ Q+H +TSV+W P
Sbjct: 264 PDDNYL-VACGPDDCS-ELWLWNVQTGELRTKMSQSHEDSLTSVAWNP 309
Score = 77 (32.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQM--HTDWVRDVAWAPNLGLPKSTIASASEDG 235
+ SG D+ V +W K P ++ HT V V+W P + P S +ASAS+DG
Sbjct: 439 IASGSEDHKVYIWH------KRSELPIAELTGHTRTVNCVSWNPQI--P-SMMASASDDG 489
Query: 236 KVIIW 240
V IW
Sbjct: 490 TVRIW 494
>GENEDB_PFALCIPARUM|MAL8P1.43 [details] [associations]
symbol:MAL8P1.43 "u5 snrnp-specific protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000091644 KO:K12857 EMBL:AL844507 RefSeq:XP_002808871.1
ProteinModelPortal:C0H4X1 EnsemblProtists:MAL8P1.43:mRNA
GeneID:2655384 KEGG:pfa:MAL8P1.43 EuPathDB:PlasmoDB:PF3D7_0822800
ProtClustDB:CLSZ2514512 Uniprot:C0H4X1
Length = 324
Score = 111 (44.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 39/149 (26%), Positives = 64/149 (42%)
Query: 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVA 62
P + H+ V+ + GK +A++S D +I + V N + + L GHK AV +
Sbjct: 29 PTMLINSHKGEVYSINFSSDGKYIASSSFDMTIMVHNVYNEC-ETIGVLRGHKNAVLQAK 87
Query: 63 WAHPKFGSILASCSFDGTVIIWK-EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLAC 121
W + + S S D + +W E S K F+ H + VN +D H L ++C
Sbjct: 88 WLQDD--NYICSASADHKLFLWDVECES----KLRSFKGHDNIVNGLDIINHNL--FVSC 139
Query: 122 GSSDGNISVFTARADGGWDTSRIDQAHPV 150
S D + + R+ W I P+
Sbjct: 140 -SDDNTLKFWDIRSK--WAVHIIKHDFPL 165
Score = 75 (31.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 26/110 (23%), Positives = 52/110 (47%)
Query: 184 DNTVKVWKLYNGIWKM-DCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV 242
DNT+K + N +K+ D F H D++ + ++ ++ +AS S D + W +
Sbjct: 183 DNTIKKYDCKN--YKLKDTFIG---HKDYITGL----DINKDETMLASISADESICFWDI 233
Query: 243 AREGDQWEGKVLHDFKTPVYRVSWSL------TGNILAVADGNNNVTLWE 286
+ E K+L +P Y + ++L N+LA G+N + +++
Sbjct: 234 --QPFSCEEKLLFQLNSPKYNIDYNLIKLSFNNDNLLACGSGDNYLYIYD 281
Score = 46 (21.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 179 CSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVI 238
C G DN + ++ I K +L HT + DVA+ P + +AS S D +
Sbjct: 270 CGSG-DNYLYIYDYKQKILKY----SLPGHTSTINDVAFHP----VEDIVASCSSDHTIF 320
Query: 239 I 239
+
Sbjct: 321 L 321
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 112 (44.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 41/128 (32%), Positives = 61/128 (47%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFG 69
H D V+ VA + G LAT S+D SI + + + + LSGH V ++ G
Sbjct: 11 HRDDVNCVA--FSGDLLATCSADKSICVYSSRDFSELPFSPLSGHGYGVHCCCFS--ACG 66
Query: 70 SILASCSFDGTVIIWKEGNSN-EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
LASCS D T ++W E + +H +S V ++P L G SDG+I
Sbjct: 67 QYLASCSTDATTMVWSMDTGEIEAVLEH---PGRSPVRVCAFSPDSSHL--VSGGSDGSI 121
Query: 129 SV--FTAR 134
++ FT+R
Sbjct: 122 ALWDFTSR 129
Score = 79 (32.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 27/83 (32%), Positives = 38/83 (45%)
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG 235
Q L SG D TV V++ G+ L H +V A++P L IA+ S D
Sbjct: 252 QMLVSGSVDKTVTVYQADEGV----LLYTLHQHDRYVTACAFSPTAPL----IATGSMDK 303
Query: 236 KVIIWTVAREGDQWEGKVLHDFK 258
V IW + EG +G++ D K
Sbjct: 304 SVNIWRM-EEGSSAQGELFADEK 325
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 127 (49.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 41/151 (27%), Positives = 72/151 (47%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
+GH + + G+ +A+ S D SI ++ N ++ LSGH+GA+ ++ W+
Sbjct: 57 SGHSGEIFCAKFNSAGQYIASGSMDRSI-LLWRANGDCENYGILSGHRGAILDLQWSRDS 115
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
I+ S S D + W + + E I+ +V H+ +NS+D + + L GS DG
Sbjct: 116 --DIIFSASADMHLASW-DLTTGERIRRYV--GHEEVINSLDISKRGEEI-LFSGSDDGT 169
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWA 158
I ++ R D I+ PV ++S A
Sbjct: 170 IGIWDPRKKHAADY--IESDFPVTAVAISEA 198
Score = 57 (25.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 25/115 (21%), Positives = 45/115 (39%)
Query: 177 KLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGK 236
++ SGG DN +KVW + K + H D + + +P+ ++ S + D
Sbjct: 201 EIYSGGIDNDIKVWD----VRKKAVVYNMAGHRDTITTLKVSPD----SQSLLSYAMDST 252
Query: 237 VIIWTVA------REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW 285
W + R ++G + K V R W G +A+ + V +W
Sbjct: 253 ARTWDIRPFAPTERHIRTFDGAPMGIEKNLV-RGGWDKEGKRVAMGAADGTVVIW 306
Score = 44 (20.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 21/82 (25%), Positives = 33/82 (40%)
Query: 158 APSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAW 217
AP LV G+ +++ G D TV +W G K+ L H V V +
Sbjct: 274 APMGIEKNLVRGGWDKEGKRVAMGAADGTVVIWSNETG--KLTY--KLPGHKAAVNCVEF 329
Query: 218 APNLGLPKSTIASASEDGKVII 239
+P + I S S D +++
Sbjct: 330 SPGT---EPLILSGSSDKTLLV 348
Score = 41 (19.5 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 228 IASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTL 284
+A + DG V+IW+ E + K L K V V +S G + G+++ TL
Sbjct: 294 VAMGAADGTVVIWS--NETGKLTYK-LPGHKAAVNCVEFS-PGTEPLILSGSSDKTL 346
>MGI|MGI:1923825 [details] [associations]
symbol:Wdr26 "WD repeat domain 26" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1923825 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV
CTD:80232 ChiTaRS:WDR26 EMBL:AC113084 EMBL:AK075743 EMBL:AK167116
EMBL:AK167017 EMBL:BC020044 EMBL:BC058601 IPI:IPI00226275
RefSeq:NP_663489.4 UniGene:Mm.289082 ProteinModelPortal:Q8C6G8
SMR:Q8C6G8 IntAct:Q8C6G8 STRING:Q8C6G8 PhosphoSite:Q8C6G8
PaxDb:Q8C6G8 PRIDE:Q8C6G8 Ensembl:ENSMUST00000162819 GeneID:226757
KEGG:mmu:226757 InParanoid:Q8C6G8 NextBio:378339 Bgee:Q8C6G8
CleanEx:MM_WDR26 Genevestigator:Q8C6G8
GermOnline:ENSMUSG00000038733 Uniprot:Q8C6G8
Length = 641
Score = 116 (45.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 45/168 (26%), Positives = 79/168 (47%)
Query: 1 MPPQKIETGHEDTVHDVAMD---YYGKRLATASSDYSIKIIGVGNNT-----SQHLAKLS 52
+PP++++T V ++ D Y+ +L S+ I V + +Q + L+
Sbjct: 276 LPPRRLQTLLRQAV-ELQRDRCLYHNTKLDNNLDSVSLLIDHVCSRRQFPCYTQQI--LT 332
Query: 53 GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKD-HVFEDHKSSVNSIDWA 111
H VW +++ G+ LA+ S D TVIIW+ +K E H V+ I W+
Sbjct: 333 EHCNEVWFCKFSND--GTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWS 390
Query: 112 PHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 159
P + L +ACG D + ++ G +++ Q+H +TSV+W P
Sbjct: 391 PDDSYL-VACGPDDCS-ELWLWNVQTGELRTKMSQSHEDSLTSVAWNP 436
Score = 77 (32.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQM--HTDWVRDVAWAPNLGLPKSTIASASEDG 235
+ SG D+ V +W K P ++ HT V V+W P + P S +ASAS+DG
Sbjct: 566 IASGSEDHKVYIWH------KRSELPIAELTGHTRTVNCVSWNPQI--P-SMMASASDDG 616
Query: 236 KVIIW 240
V IW
Sbjct: 617 TVRIW 621
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 108 (43.1 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 54/196 (27%), Positives = 88/196 (44%)
Query: 6 IETGHEDTVHDVAM--DYYGKRLATASSDYSIKIIGVG-NNTSQHL--AK--LSGHKGAV 58
+E GH D V V+ D K + +AS D + + + ++ S + AK L+GH A+
Sbjct: 16 LEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAI 75
Query: 59 WEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLC 118
+V+ + G S S+D +V +W + + E I+ F H S V S+ ++P +
Sbjct: 76 NDVSISSD--GLFALSGSWDHSVRLW-DLSLGETIRS--FIGHTSDVFSVSFSPDNRQIV 130
Query: 119 LACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
A S D I ++ A + + DQ H +T V ++PS +V G+
Sbjct: 131 SA--SRDKTIKLWNTLAQCKYTIT--DQQHTDWITCVRFSPSPNQAIIVSCGW------- 179
Query: 179 CSGGCDNTVKVWKLYN 194
D VKVW L N
Sbjct: 180 -----DKLVKVWNLKN 190
Score = 96 (38.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 41/177 (23%), Positives = 81/177 (45%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAW 63
+K TGH ++DV++ G + S D+S+++ + + + + GH V+ V++
Sbjct: 65 KKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDL--SLGETIRSFIGHTSDVFSVSF 122
Query: 64 AHPKFGSILASCSFDGTVIIWKE-GNSNEWIKDHVFEDHKSSVNSIDWAPH-ELGLCLAC 121
+ P I+ S S D T+ +W I D + H + + ++P + ++C
Sbjct: 123 S-PDNRQIV-SASRDKTIKLWNTLAQCKYTITD---QQHTDWITCVRFSPSPNQAIIVSC 177
Query: 122 GSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
G D + V+ + D ++ + H + +V+ +P G+L SG D V KL
Sbjct: 178 GW-DKLVKVWNLK---NCDLNKNLEGHTGVLNTVTISPD---GSLCASGGKDGVAKL 227
Score = 71 (30.1 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 28/82 (34%), Positives = 37/82 (45%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ S G D VKVW L N D L+ HT + V +P+ G S AS +DG
Sbjct: 174 IVSCGWDKLVKVWNLKN----CDLNKNLEGHTGVLNTVTISPD-G---SLCASGGKDGVA 225
Query: 238 IIWTVAREGDQWEGKVLHDFKT 259
+W V EGK L+ +T
Sbjct: 226 KLWDVK------EGKHLYSLET 241
Score = 62 (26.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 17/87 (19%), Positives = 34/87 (39%)
Query: 160 STAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQ--MHTDWVRDVAW 217
S G+ + S P D +++W L + + + +P Q + W + W
Sbjct: 238 SLETGSTINSLCFSPCDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTW 297
Query: 218 APNLGLPKSTIASASEDGKVIIWTVAR 244
+ N L + S DG + ++ V +
Sbjct: 298 SANGQL----LYCGSTDGNIYVYEVKK 320
Score = 39 (18.8 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 264 VSWSLTGNILAVADGNNNVTLWE 286
++WS G +L + N+ ++E
Sbjct: 295 LTWSANGQLLYCGSTDGNIYVYE 317
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 108 (43.1 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 54/196 (27%), Positives = 88/196 (44%)
Query: 6 IETGHEDTVHDVAM--DYYGKRLATASSDYSIKIIGVG-NNTSQHL--AK--LSGHKGAV 58
+E GH D V V+ D K + +AS D + + + ++ S + AK L+GH A+
Sbjct: 16 LEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAI 75
Query: 59 WEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLC 118
+V+ + G S S+D +V +W + + E I+ F H S V S+ ++P +
Sbjct: 76 NDVSISSD--GLFALSGSWDHSVRLW-DLSLGETIRS--FIGHTSDVFSVSFSPDNRQIV 130
Query: 119 LACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
A S D I ++ A + + DQ H +T V ++PS +V G+
Sbjct: 131 SA--SRDKTIKLWNTLAQCKYTIT--DQQHTDWITCVRFSPSPNQAIIVSCGW------- 179
Query: 179 CSGGCDNTVKVWKLYN 194
D VKVW L N
Sbjct: 180 -----DKLVKVWNLKN 190
Score = 96 (38.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 41/177 (23%), Positives = 81/177 (45%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAW 63
+K TGH ++DV++ G + S D+S+++ + + + + GH V+ V++
Sbjct: 65 KKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDL--SLGETIRSFIGHTSDVFSVSF 122
Query: 64 AHPKFGSILASCSFDGTVIIWKE-GNSNEWIKDHVFEDHKSSVNSIDWAPH-ELGLCLAC 121
+ P I+ S S D T+ +W I D + H + + ++P + ++C
Sbjct: 123 S-PDNRQIV-SASRDKTIKLWNTLAQCKYTITD---QQHTDWITCVRFSPSPNQAIIVSC 177
Query: 122 GSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
G D + V+ + D ++ + H + +V+ +P G+L SG D V KL
Sbjct: 178 GW-DKLVKVWNLK---NCDLNKNLEGHTGVLNTVTISPD---GSLCASGGKDGVAKL 227
Score = 71 (30.1 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 28/82 (34%), Positives = 37/82 (45%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ S G D VKVW L N D L+ HT + V +P+ G S AS +DG
Sbjct: 174 IVSCGWDKLVKVWNLKN----CDLNKNLEGHTGVLNTVTISPD-G---SLCASGGKDGVA 225
Query: 238 IIWTVAREGDQWEGKVLHDFKT 259
+W V EGK L+ +T
Sbjct: 226 KLWDVK------EGKHLYSLET 241
Score = 62 (26.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 17/87 (19%), Positives = 34/87 (39%)
Query: 160 STAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQ--MHTDWVRDVAW 217
S G+ + S P D +++W L + + + +P Q + W + W
Sbjct: 238 SLETGSTINSLCFSPCDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTW 297
Query: 218 APNLGLPKSTIASASEDGKVIIWTVAR 244
+ N L + S DG + ++ V +
Sbjct: 298 SANGQL----LYCGSTDGNIYVYEVKK 320
Score = 39 (18.8 bits), Expect = 1.7e-07, Sum P(3) = 1.7e-07
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 264 VSWSLTGNILAVADGNNNVTLWE 286
++WS G +L + N+ ++E
Sbjct: 295 LTWSANGQLLYCGSTDGNIYVYE 317
>RGD|1565589 [details] [associations]
symbol:Wdr26 "WD repeat domain 26" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1565589 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 IPI:IPI00767527 PRIDE:F1LTR1
Ensembl:ENSRNOT00000005059 Uniprot:F1LTR1
Length = 622
Score = 115 (45.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 44/168 (26%), Positives = 79/168 (47%)
Query: 1 MPPQKIETGHEDTVHDVAMD---YYGKRLATASSDYSIKIIGVGNNT-----SQHLAKLS 52
+PP++++T V ++ D Y+ +L S+ I V + +Q + L+
Sbjct: 257 LPPRRLQTLLRQAV-ELQRDRCLYHNTKLDNNLDSVSLLIDHVCSRRQFPCYTQQI--LT 313
Query: 53 GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKD-HVFEDHKSSVNSIDWA 111
H VW +++ G+ LA+ S D TVI+W+ +K E H V+ I W+
Sbjct: 314 EHCNEVWFCKFSND--GTKLATGSKDTTVIVWQVDADTHLLKLLKTLEGHAYGVSYIAWS 371
Query: 112 PHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 159
P + L +ACG D + ++ G +++ Q+H +TSV+W P
Sbjct: 372 PDDSYL-VACGPDDCS-ELWLWNVQTGELRTKMSQSHEDSLTSVAWNP 417
Score = 77 (32.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQM--HTDWVRDVAWAPNLGLPKSTIASASEDG 235
+ SG D+ V +W K P ++ HT V V+W P + P S +ASAS+DG
Sbjct: 547 IASGSEDHKVYIWH------KRSELPIAELTGHTRTVNCVSWNPQI--P-SMMASASDDG 597
Query: 236 KVIIW 240
V IW
Sbjct: 598 TVRIW 602
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 146 (56.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 89/311 (28%), Positives = 138/311 (44%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLA-KLSGHKGAVWEVAWAHPK 67
GH+ + V GK+LATAS D + + N Q A + GHK V V ++ P
Sbjct: 16 GHKAAITSVDFSPSGKQLATASWDTFLML---WNCKPQARAFRYVGHKDVVTSVQFS-P- 70
Query: 68 FGSILASCSFDGTVIIW---KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSS 124
G++LAS S D TV +W K G S+E F+ H + V S+D++ G LA S
Sbjct: 71 LGNLLASASRDRTVRLWIPDKRGKSSE------FKAHTAPVRSVDFSAD--GQFLATASE 122
Query: 125 DGNISV---------FTARADGGWDTSRIDQAHPVG--VTSVS-------WAPSTAP--- 163
D +I V ++ W R + P G + S S W +
Sbjct: 123 DKSIKVWNMYRQRFLYSLYRHTHW--VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 164 --GALVG-SGFLD--PVQK-LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAW 217
VG + F+D P + S G D+TVK+W + + K+ Q+H+ V V++
Sbjct: 181 NFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIR--VNKL--LQHYQVHSGGVNCVSF 236
Query: 218 APNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKT---PVYRVSWSLTGNILA 274
P+ G + I +AS DG + I D EG++++ + PV+ VS+S G + +
Sbjct: 237 HPS-G---NYIITASSDGTLKIL------DLLEGRLIYTLQGHTGPVFTVSFSKGGELFS 286
Query: 275 VADGNNNVTLW 285
+ V LW
Sbjct: 287 SGGADTQVLLW 297
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 143 (55.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 48/165 (29%), Positives = 78/165 (47%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH ++ V GK LA+AS+D +IKI G + + L GHK + ++AW+
Sbjct: 44 GHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERT--LEGHKEGISDIAWSQDS- 100
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
++ S S D T+ IW + S + +K + HK V + + P L ++ GS D N+
Sbjct: 101 -KLICSASDDKTIKIW-DVESGKMVK--TLKGHKEYVFGVSFNPQS-NLIVS-GSFDENV 154
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLD 173
++ + +++ AH VT V + G LV SG D
Sbjct: 155 RIWDVNTG---ECTKMISAHSDPVTGVHF---NRDGTLVVSGSYD 193
Score = 142 (55.0 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 53/187 (28%), Positives = 89/187 (47%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH++ + D+A K + +AS D +IKI V + + + L GHK V+ V++ +P+
Sbjct: 86 GHKEGISDIAWSQDSKLICSASDDKTIKIWDV--ESGKMVKTLKGHKEYVFGVSF-NPQ- 141
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
+++ S SFD V IW + N+ E K + H V + + + G + GS DG +
Sbjct: 142 SNLIVSGSFDENVRIW-DVNTGECTK--MISAHSDPVTGVHF--NRDGTLVVSGSYDGTV 196
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVK 188
++ G + I V+ V ++P+ G V +G LD +L S +N K
Sbjct: 197 RIWDTTT--GQLLNTISTEDGKEVSFVKFSPN---GKFVLAGTLDNTLRLWS--YNNNKK 249
Query: 189 VWKLYNG 195
K Y G
Sbjct: 250 CLKTYTG 256
Score = 126 (49.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 33/109 (30%), Positives = 55/109 (50%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
L S D T+K+W Y+G ++ L+ H + + D+AW+ + L I SAS+D +
Sbjct: 61 LASASADKTIKIWGAYDGKFER----TLEGHKEGISDIAWSQDSKL----ICSASDDKTI 112
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
IW V E + K L K V+ VS++ N++ + NV +W+
Sbjct: 113 KIWDV--ESGKMV-KTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWD 158
>CGD|CAL0000383 [details] [associations]
symbol:orf19.4293 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IEA] [GO:0016226
"iron-sulfur cluster assembly" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000383 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000021 EMBL:AACQ01000022 RefSeq:XP_720601.1
RefSeq:XP_720729.1 ProteinModelPortal:Q5AG86 STRING:Q5AG86
GeneID:3637653 GeneID:3637738 KEGG:cal:CaO19.11769
KEGG:cal:CaO19.4293 Uniprot:Q5AG86
Length = 383
Score = 144 (55.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 61/252 (24%), Positives = 109/252 (43%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQH---LAKLSGHKGAVWEVAWAH 65
GHE+ V V ++ G+ LA+ S D S+ I T + +A L+ H V V+W H
Sbjct: 135 GHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEEFECVAVLNDHSQDVKNVSW-H 193
Query: 66 PKFGSILASCSFDGTVIIWKEGNS-NEWIKDHVFEDHKSSV--NSIDWAPHELG----LC 118
P +ILAS S+D T+ I+++ + +EW + H+ +V + + + L
Sbjct: 194 PSM-NILASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTVWCSKFESLKSPIADSSVLR 252
Query: 119 LACGSSDGNISVFTA-RADGGWDTSRIDQAHPVGVTS-VSWA-----PSTAPGALVGSGF 171
L S D ++ ++ A R + ++++ + T+ + W PS + +
Sbjct: 253 LVSASDDLSVRIWVAKREQEDEEQAKLELPSSIRHTNEMVWEVESVLPSVHKYPVYSVAW 312
Query: 172 LDPVQKLCSGGCDNTVKVW-KLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
K+ S G D + V+ + G W +D + V WA L + S
Sbjct: 313 SALTGKIASAGSDGKIVVYSETEKGKWVIDSIHEGAHGVHEINCVIWA-QLDDENEILVS 371
Query: 231 ASEDGKVIIWTV 242
A +DG V +W +
Sbjct: 372 AGDDGYVNLWKI 383
Score = 144 (55.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 72/282 (25%), Positives = 117/282 (41%)
Query: 36 KIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN--EWI 93
+I+ NN +A + GH+ V V W G LASCS D +V IW+ E+
Sbjct: 118 EILTSPNNEWNLMAIIEGHENEVKAVDWNFQ--GQYLASCSRDKSVWIWETDPETLEEFE 175
Query: 94 KDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGG-WDTSRIDQAHPVGV 152
V DH V ++ W P + + LA S D I ++ G W I H V
Sbjct: 176 CVAVLNDHSQDVKNVSWHP-SMNI-LASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTV 233
Query: 153 TSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVW------------KLY------- 193
+ +P + S L +L S D +V++W KL
Sbjct: 234 WCSKFESLKSP--IADSSVL----RLVSASDDLSVRIWVAKREQEDEEQAKLELPSSIRH 287
Query: 194 -NG-IWKMDC-FPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWE 250
N +W+++ P++ + V VAW+ G IASA DGK+++++ +G +W
Sbjct: 288 TNEMVWEVESVLPSVHKYP--VYSVAWSALTG----KIASAGSDGKIVVYSETEKG-KWV 340
Query: 251 GKVLHDFKTPVYRVS---WSLTGN---ILAVADGNNNVTLWE 286
+H+ V+ ++ W+ + IL A + V LW+
Sbjct: 341 IDSIHEGAHGVHEINCVIWAQLDDENEILVSAGDDGYVNLWK 382
Score = 107 (42.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 54/215 (25%), Positives = 97/215 (45%)
Query: 89 SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADG--GWDTSRIDQ 146
+NEW + E H++ V ++DW + G LA S D ++ ++ + ++ +
Sbjct: 124 NNEWNLMAIIEGHENEVKAVDW--NFQGQYLASCSRDKSVWIWETDPETLEEFECVAVLN 181
Query: 147 AHPVGVTSVSWAPSTAPGALVGSGFLDPV---QKLCSGGCDNTVKVWKLYNG-IW--KMD 200
H V +VSW PS L S + D + Q+ +G + V + + G +W K +
Sbjct: 182 DHSQDVKNVSWHPSM--NILASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTVWCSKFE 239
Query: 201 CFPALQMHTDWVRDVAWAPNLGLPKSTIASASED---GKVIIWTVAREGDQ--WEGK-VL 254
+ + +R V+ + +L + ED K+ + + R ++ WE + VL
Sbjct: 240 SLKSPIADSSVLRLVSASDDLSVRIWVAKREQEDEEQAKLELPSSIRHTNEMVWEVESVL 299
Query: 255 HDF-KTPVYRVSWS-LTGNILAVADGNNNVTLWEE 287
K PVY V+WS LTG I A A + + ++ E
Sbjct: 300 PSVHKYPVYSVAWSALTGKI-ASAGSDGKIVVYSE 333
Score = 68 (29.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 28/88 (31%), Positives = 41/88 (46%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHL-AKLSG-HKGAVWEVAWAHPK 67
H D V V++ +ATAS+D S K+ + L AKL HK ++ VA+ P
Sbjct: 11 HNDKVWSVSVHPTLPIIATASTDKSTKLYKLSARQKFPLVAKLEDTHKRSIRSVAFKPPL 70
Query: 68 FGS-----------ILASCSFDGTVIIW 84
G+ LA+ SFD T+ +W
Sbjct: 71 GGADTPKSDFLDLPALAAGSFDSTISVW 98
>UNIPROTKB|Q5AG86 [details] [associations]
symbol:CIA1 "Probable cytosolic iron-sulfur protein
assembly protein 1" species:237561 "Candida albicans SC5314"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000383 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000021 EMBL:AACQ01000022 RefSeq:XP_720601.1
RefSeq:XP_720729.1 ProteinModelPortal:Q5AG86 STRING:Q5AG86
GeneID:3637653 GeneID:3637738 KEGG:cal:CaO19.11769
KEGG:cal:CaO19.4293 Uniprot:Q5AG86
Length = 383
Score = 144 (55.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 61/252 (24%), Positives = 109/252 (43%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQH---LAKLSGHKGAVWEVAWAH 65
GHE+ V V ++ G+ LA+ S D S+ I T + +A L+ H V V+W H
Sbjct: 135 GHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEEFECVAVLNDHSQDVKNVSW-H 193
Query: 66 PKFGSILASCSFDGTVIIWKEGNS-NEWIKDHVFEDHKSSV--NSIDWAPHELG----LC 118
P +ILAS S+D T+ I+++ + +EW + H+ +V + + + L
Sbjct: 194 PSM-NILASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTVWCSKFESLKSPIADSSVLR 252
Query: 119 LACGSSDGNISVFTA-RADGGWDTSRIDQAHPVGVTS-VSWA-----PSTAPGALVGSGF 171
L S D ++ ++ A R + ++++ + T+ + W PS + +
Sbjct: 253 LVSASDDLSVRIWVAKREQEDEEQAKLELPSSIRHTNEMVWEVESVLPSVHKYPVYSVAW 312
Query: 172 LDPVQKLCSGGCDNTVKVW-KLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
K+ S G D + V+ + G W +D + V WA L + S
Sbjct: 313 SALTGKIASAGSDGKIVVYSETEKGKWVIDSIHEGAHGVHEINCVIWA-QLDDENEILVS 371
Query: 231 ASEDGKVIIWTV 242
A +DG V +W +
Sbjct: 372 AGDDGYVNLWKI 383
Score = 144 (55.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 72/282 (25%), Positives = 117/282 (41%)
Query: 36 KIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN--EWI 93
+I+ NN +A + GH+ V V W G LASCS D +V IW+ E+
Sbjct: 118 EILTSPNNEWNLMAIIEGHENEVKAVDWNFQ--GQYLASCSRDKSVWIWETDPETLEEFE 175
Query: 94 KDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGG-WDTSRIDQAHPVGV 152
V DH V ++ W P + + LA S D I ++ G W I H V
Sbjct: 176 CVAVLNDHSQDVKNVSWHP-SMNI-LASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTV 233
Query: 153 TSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVW------------KLY------- 193
+ +P + S L +L S D +V++W KL
Sbjct: 234 WCSKFESLKSP--IADSSVL----RLVSASDDLSVRIWVAKREQEDEEQAKLELPSSIRH 287
Query: 194 -NG-IWKMDC-FPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWE 250
N +W+++ P++ + V VAW+ G IASA DGK+++++ +G +W
Sbjct: 288 TNEMVWEVESVLPSVHKYP--VYSVAWSALTG----KIASAGSDGKIVVYSETEKG-KWV 340
Query: 251 GKVLHDFKTPVYRVS---WSLTGN---ILAVADGNNNVTLWE 286
+H+ V+ ++ W+ + IL A + V LW+
Sbjct: 341 IDSIHEGAHGVHEINCVIWAQLDDENEILVSAGDDGYVNLWK 382
Score = 107 (42.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 54/215 (25%), Positives = 97/215 (45%)
Query: 89 SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADG--GWDTSRIDQ 146
+NEW + E H++ V ++DW + G LA S D ++ ++ + ++ +
Sbjct: 124 NNEWNLMAIIEGHENEVKAVDW--NFQGQYLASCSRDKSVWIWETDPETLEEFECVAVLN 181
Query: 147 AHPVGVTSVSWAPSTAPGALVGSGFLDPV---QKLCSGGCDNTVKVWKLYNG-IW--KMD 200
H V +VSW PS L S + D + Q+ +G + V + + G +W K +
Sbjct: 182 DHSQDVKNVSWHPSM--NILASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTVWCSKFE 239
Query: 201 CFPALQMHTDWVRDVAWAPNLGLPKSTIASASED---GKVIIWTVAREGDQ--WEGK-VL 254
+ + +R V+ + +L + ED K+ + + R ++ WE + VL
Sbjct: 240 SLKSPIADSSVLRLVSASDDLSVRIWVAKREQEDEEQAKLELPSSIRHTNEMVWEVESVL 299
Query: 255 HDF-KTPVYRVSWS-LTGNILAVADGNNNVTLWEE 287
K PVY V+WS LTG I A A + + ++ E
Sbjct: 300 PSVHKYPVYSVAWSALTGKI-ASAGSDGKIVVYSE 333
Score = 68 (29.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 28/88 (31%), Positives = 41/88 (46%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHL-AKLSG-HKGAVWEVAWAHPK 67
H D V V++ +ATAS+D S K+ + L AKL HK ++ VA+ P
Sbjct: 11 HNDKVWSVSVHPTLPIIATASTDKSTKLYKLSARQKFPLVAKLEDTHKRSIRSVAFKPPL 70
Query: 68 FGS-----------ILASCSFDGTVIIW 84
G+ LA+ SFD T+ +W
Sbjct: 71 GGADTPKSDFLDLPALAAGSFDSTISVW 98
>UNIPROTKB|F1S8S6 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:CU927957
RefSeq:XP_003357688.1 UniGene:Ssc.21945 Ensembl:ENSSSCT00000011871
GeneID:100523327 KEGG:ssc:100523327 Uniprot:F1S8S6
Length = 660
Score = 115 (45.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 45/168 (26%), Positives = 79/168 (47%)
Query: 1 MPPQKIETGHEDTVHDVAMD---YYGKRLATASSDYSIKIIGVGNNT-----SQHLAKLS 52
+PP++++T V ++ D Y+ +L S+ I V + +Q + L+
Sbjct: 295 LPPRRLQTLLRQAV-ELQRDRCLYHNTKLDNNLDSVSLLIDHVCSRRQFPCYTQQI--LT 351
Query: 53 GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKD-HVFEDHKSSVNSIDWA 111
H VW +++ G+ LA+ S D TVIIW+ +K E H V+ I W+
Sbjct: 352 EHCNEVWFCKFSND--GTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWS 409
Query: 112 PHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 159
P + L +ACG D + ++ G +++ Q+H +TSV+W P
Sbjct: 410 PDDNYL-VACGPDDCS-ELWLWNVQTGELRTKMSQSHEDSLTSVAWNP 455
Score = 77 (32.2 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQM--HTDWVRDVAWAPNLGLPKSTIASASEDG 235
+ SG D+ V +W K P ++ HT V V+W P + P S +ASAS+DG
Sbjct: 585 IASGSEDHKVYIWH------KRSELPIAELTGHTRTVNCVSWNPQI--P-SMMASASDDG 635
Query: 236 KVIIW 240
V IW
Sbjct: 636 TVRIW 640
>UNIPROTKB|Q9H7D7 [details] [associations]
symbol:WDR26 "WD repeat-containing protein 26" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV EMBL:AB209887
EMBL:AC099790 EMBL:BC031471 EMBL:BC034498 EMBL:BC052301
EMBL:BC063817 EMBL:AY221751 EMBL:AY304473 EMBL:AF130049
EMBL:EF011612 EMBL:AK024669 IPI:IPI00414197 IPI:IPI00645819
IPI:IPI00646469 IPI:IPI00829602 RefSeq:NP_001108585.2
RefSeq:NP_079436.4 UniGene:Hs.497873 UniGene:Hs.729289
ProteinModelPortal:Q9H7D7 SMR:Q9H7D7 IntAct:Q9H7D7 STRING:Q9H7D7
PhosphoSite:Q9H7D7 DMDM:134047967 PaxDb:Q9H7D7 PRIDE:Q9H7D7
Ensembl:ENST00000295024 Ensembl:ENST00000366852
Ensembl:ENST00000414423 GeneID:80232 KEGG:hsa:80232 UCSC:uc001hop.4
UCSC:uc001hoq.4 UCSC:uc021pjt.1 CTD:80232 GeneCards:GC01M224573
HGNC:HGNC:21208 HPA:HPA028539 neXtProt:NX_Q9H7D7
PharmGKB:PA134907873 InParanoid:Q9H7D7 ChiTaRS:WDR26
GenomeRNAi:80232 NextBio:70673 ArrayExpress:Q9H7D7 Bgee:Q9H7D7
CleanEx:HS_WDR26 Genevestigator:Q9H7D7 GermOnline:ENSG00000162923
Uniprot:Q9H7D7
Length = 661
Score = 115 (45.5 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 45/168 (26%), Positives = 79/168 (47%)
Query: 1 MPPQKIETGHEDTVHDVAMD---YYGKRLATASSDYSIKIIGVGNNT-----SQHLAKLS 52
+PP++++T V ++ D Y+ +L S+ I V + +Q + L+
Sbjct: 296 LPPRRLQTLLRQAV-ELQRDRCLYHNTKLDNNLDSVSLLIDHVCSRRQFPCYTQQI--LT 352
Query: 53 GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKD-HVFEDHKSSVNSIDWA 111
H VW +++ G+ LA+ S D TVIIW+ +K E H V+ I W+
Sbjct: 353 EHCNEVWFCKFSND--GTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWS 410
Query: 112 PHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 159
P + L +ACG D + ++ G +++ Q+H +TSV+W P
Sbjct: 411 PDDNYL-VACGPDDCS-ELWLWNVQTGELRTKMSQSHEDSLTSVAWNP 456
Score = 77 (32.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQM--HTDWVRDVAWAPNLGLPKSTIASASEDG 235
+ SG D+ V +W K P ++ HT V V+W P + P S +ASAS+DG
Sbjct: 586 IASGSEDHKVYIWH------KRSELPIAELTGHTRTVNCVSWNPQI--P-SMMASASDDG 636
Query: 236 KVIIW 240
V IW
Sbjct: 637 TVRIW 641
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 148 (57.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 40/128 (31%), Positives = 58/128 (45%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFG 69
H+ TV D+ + G L TAS D+ +K+ + N + + GHK V+W HP
Sbjct: 314 HKSTVMDLKWNDNGNWLVTASRDHLLKLFDI-RNLREEVQVFRGHKKEASSVSW-HPIHE 371
Query: 70 SILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNIS 129
+ S DG+++ W G E V H S V ++ W H LG L GS+D I
Sbjct: 372 GLFCSGGSDGSILFWNVGTDKEI--GCVETAHDSIVWTLAW--HPLGHILCSGSNDHTIK 427
Query: 130 VFTARADG 137
+T G
Sbjct: 428 FWTRNRPG 435
>UNIPROTKB|F1NMC6 [details] [associations]
symbol:ELP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0046425 "regulation of JAK-STAT
cascade" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005794 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0046425 GeneTree:ENSGT00390000000916 OMA:DCLIRIW
EMBL:AADN02008271 IPI:IPI00593505 ProteinModelPortal:F1NMC6
Ensembl:ENSGALT00000021568 Uniprot:F1NMC6
Length = 822
Score = 143 (55.4 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 61/209 (29%), Positives = 94/209 (44%)
Query: 48 LAKLSGHKGAVWEVAWAHPKFGSI---LASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSS 104
+A L GH G V V W + G+ L S + D +I+W E N N+ +K E H +
Sbjct: 50 VAALRGHGGRVSCVRWIRRRDGATETELVSGASDKKLILW-EWNRNQLVKSVPLEGHTEA 108
Query: 105 VNSID--WAPHE--LGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
V ++D + E L L +A +SD + +++ R D + Q V VS S
Sbjct: 109 VCAVDAIYQSDEPDLNLLIASAASDSTVRIWS-RHDSEVKCIEVLQFGNGFVMDVSL--S 165
Query: 161 TAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPN 220
PG+ V P+ L GG D + ++ NG ++ L H DW+R V WA
Sbjct: 166 FLPGSNV------PI--LACGGDDCKINLFIQQNGQFQKTL--TLPGHEDWIRGVEWAI- 214
Query: 221 LGLPKSTIASASEDGKVIIWTVAREGDQW 249
G +AS ++D + IW V + Q+
Sbjct: 215 CG-DDLFLASCAQDCLIRIWKVCTKSKQF 242
Score = 47 (21.6 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 229 ASASEDGKVIIWTVAREGDQWEG-KVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287
AS E +I+W+ + W+ + L V ++++S +L + N +LW E
Sbjct: 583 ASKKEHAAIILWSTS----SWKKIQSLPFHNLTVTQLAFSPNDKLLLAVSRDRNWSLWRE 638
>UNIPROTKB|F1P3E7 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ EMBL:AADN02012163 EMBL:AADN02012164
EMBL:AADN02012165 IPI:IPI00585040 Ensembl:ENSGALT00000015154
Uniprot:F1P3E7
Length = 684
Score = 114 (45.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 34/110 (30%), Positives = 55/110 (50%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKD-HVFEDHKSSVNSID 109
L+ H VW +++ G+ LA+ S D TVIIW+ +K E H V+ I
Sbjct: 374 LTEHCNEVWFCKFSND--GTKLATGSKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYIA 431
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 159
W+P + L +ACG D + ++ G +++ Q+H +TSV+W P
Sbjct: 432 WSPDDNYL-VACGPDDCS-ELWLWNVQTGELRTKMSQSHEDSLTSVAWNP 479
Score = 100 (40.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 33/111 (29%), Positives = 51/111 (45%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQ-HLAK-LSGHKGAVWEV 61
Q+I T H + V G +LAT S D ++ I V +T Q L K L GH V +
Sbjct: 371 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYI 430
Query: 62 AWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP 112
AW+ P + L +C D +W ++ + + H+ S+ S+ W P
Sbjct: 431 AWS-PD-DNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNP 479
Score = 77 (32.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQM--HTDWVRDVAWAPNLGLPKSTIASASEDG 235
+ SG D+ V +W K P ++ HT V V+W P + P S +ASAS+DG
Sbjct: 609 IASGSEDHKVYIWH------KRSELPIAELTGHTRTVNCVSWNPQI--P-SMMASASDDG 659
Query: 236 KVIIW 240
V IW
Sbjct: 660 TVRIW 664
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 143 (55.4 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 35/110 (31%), Positives = 60/110 (54%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNS-NEWIKDHVFEDHKSSVNSID 109
L+GHK +V ++AW+ + G +LASCS DG++ +W ++ + V + H+S VN I
Sbjct: 271 LTGHKKSVEDLAWSPTETG-LLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVIS 329
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 159
W HE L ++ G DG + +++ + + + H +TSV W P
Sbjct: 330 WNRHE-NLIVS-GGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHP 377
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/171 (26%), Positives = 73/171 (42%)
Query: 52 SGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEW-IKDHVFEDHKSSVNSIDW 110
SG +G + +AW+ K G LA+ + +W+ +W + + HK SV + W
Sbjct: 227 SGKEG--YGLAWSSLKTGD-LATGDIIKKIYLWQMKEGGQWAVGANPLTGHKKSVEDLAW 283
Query: 111 APHELGLCLACGSSDGNISVFTAR-ADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 169
+P E GL +C S+DG+I ++ R A + +AH V +SW + +V
Sbjct: 284 SPTETGLLASC-SADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISW--NRHENLIV-- 338
Query: 170 GFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPN 220
SGG D +K+W L I + H + V W P+
Sbjct: 339 ----------SGGDDGELKIWSLKT-IQFGQPVALFKYHNSPITSVDWHPH 378
>TAIR|locus:2050388 [details] [associations]
symbol:AT2G19540 "AT2G19540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC005917
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000036730
KO:K14848 OMA:NRLMMLR UniGene:At.24966 EMBL:AF370506 EMBL:AY128814
IPI:IPI00526267 PIR:A84578 RefSeq:NP_179544.1
ProteinModelPortal:Q9ZUN8 SMR:Q9ZUN8 STRING:Q9ZUN8 PaxDb:Q9ZUN8
PRIDE:Q9ZUN8 EnsemblPlants:AT2G19540.1 GeneID:816473
KEGG:ath:AT2G19540 TAIR:At2g19540 InParanoid:Q9ZUN8
PhylomeDB:Q9ZUN8 ProtClustDB:CLSN2683177 ArrayExpress:Q9ZUN8
Genevestigator:Q9ZUN8 Uniprot:Q9ZUN8
Length = 469
Score = 142 (55.0 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 41/123 (33%), Positives = 59/123 (47%)
Query: 52 SGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW--KEGNSNEWIKDHVFEDHKSSVNSID 109
+GH +V ++ W+ P ++ ASCS DG+V +W + G S F+ H + VN I
Sbjct: 266 AGHTASVEDLQWS-PAEENVFASCSVDGSVAVWDIRLGKSPALS----FKAHNADVNVIS 320
Query: 110 WAPHELGLC-LACGSSDGNISVFTARADGGWDTSRID-QAHPVGVTSVSWAPSTAPGALV 167
W + L C LA GS DG S+ R G D + H +TS+ W+ A V
Sbjct: 321 W--NRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAV 378
Query: 168 GSG 170
SG
Sbjct: 379 TSG 381
Score = 126 (49.4 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 33/112 (29%), Positives = 53/112 (47%)
Query: 48 LAKLSGHKGAVWEVAWAHPKFGSILAS-CSFDGTVIIWKEGNSNEWIKDHV-FEDHKSSV 105
L SGHK + + W+ G +L+ C + +W E S W D + F H +SV
Sbjct: 216 LVNFSGHKDEGYAIDWSPATAGRLLSGDCK--SMIHLW-EPASGSWAVDPIPFAGHTASV 272
Query: 106 NSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSW 157
+ W+P E + +C S DG+++V+ R G + +AH V +SW
Sbjct: 273 EDLQWSPAEENVFASC-SVDGSVAVWDIRL--GKSPALSFKAHNADVNVISW 321
Score = 118 (46.6 bits), Expect = 0.00027, P = 0.00027
Identities = 49/192 (25%), Positives = 81/192 (42%)
Query: 101 HKSSVNSIDWAPHELGLCLACGSSDGNISVFTA----RADGGWDTSRIDQAHPVGVTSVS 156
H VN I P +C++ S G++ V+ A +T D PV ++
Sbjct: 158 HHGCVNRIRAMPQNSHICVSWADS-GHVQVWDMSSHLNALAESETEGKDGTSPV----LN 212
Query: 157 WAPSTAPGALVGSGF-LD--PVQ--KLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDW 211
AP G+ +D P +L SG C + + +W+ +G W +D P HT
Sbjct: 213 QAPLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVDPIP-FAGHTAS 271
Query: 212 VRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGN 271
V D+ W+P ++ AS S DG V +W + R G V +SW+ +
Sbjct: 272 VEDLQWSP---AEENVFASCSVDGSVAVWDI-RLGKS-PALSFKAHNADVNVISWNRLAS 326
Query: 272 ILAVADGNNNVT 283
+ +A G+++ T
Sbjct: 327 CM-LASGSDDGT 337
Score = 58 (25.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPA-LQMHTDWVRDVAWAPNLGLPKSTIASASEDGK 236
L SG D T + L I D A + H + + W+ + ST+A S D +
Sbjct: 329 LASGSDDGTFSIRDL-RLIKGGDAVVAHFEYHKHPITSIEWSAH---EASTLAVTSGDNQ 384
Query: 237 VIIWTVAREGDQWE 250
+ IW ++ E D+ E
Sbjct: 385 LTIWDLSLEKDEEE 398
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 140 (54.3 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 84/307 (27%), Positives = 130/307 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D + V K+LA+ S D +KI + + L GHK AV V ++ P
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYC--LVGHKDAVMCVQFS-PS- 73
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G ++AS S D TV +W E VF+ H ++V S+ ++ G L S D I
Sbjct: 74 GHLVASGSRDKTVCLWVPSVKGE---STVFKAHTATVRSVHFSSD--GQSLVTASDDKTI 128
Query: 129 SVFTA-RADGGWDTS------RIDQAHPVG--VTSVS-------WAPSTAP---GALVGS 169
V+T R + S R + P G + S S W ++
Sbjct: 129 KVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHG 188
Query: 170 GFLDPVQKLCSGGC------DNTVKVWKLYNGIWKMD-CFPALQMHTDWVRDVAWAPNLG 222
GF + V+ SG C D TVKVW + +M+ Q+HT V +++ P+ G
Sbjct: 189 GFANHVEFHPSGTCIAAAGTDKTVKVWDV-----RMNRLLQHYQVHTAAVNSLSFHPS-G 242
Query: 223 LPKSTIASASEDGKVIIWTVAREGDQWEGKVL---HDFKTPVYRVSWSLTGNILAVADGN 279
+ + +AS D + I D EG++L H + P V++S TG+ A +
Sbjct: 243 ---NYLITASNDSTLKIL------DLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSD 293
Query: 280 NNVTLWE 286
V +W+
Sbjct: 294 EQVMVWK 300
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 142 (55.0 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK-EGNSNEW-IKDH--VFEDHKSSV 105
+L GH+ + ++W +P L S S D T+ +W G E I D +F H + V
Sbjct: 172 RLRGHQKEGYGLSW-NPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVV 230
Query: 106 NSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163
+ W H L L GS D + ++ R++ S AH V +S+ P
Sbjct: 231 EDVSW--HLLHESLF-GSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY--- 284
Query: 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGL 223
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 285 -----SEFI-----LATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVQWSPH--- 328
Query: 224 PKSTIASASEDGKVIIWTVAREGDQWEGKVLHD 256
++ +AS+ D ++ +W +++ G++ + D
Sbjct: 329 NETILASSGTDRRLNVWDLSKIGEEQSAEDAED 361
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/196 (25%), Positives = 87/196 (44%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAW 63
I TGH V DV+ + L + + D + I NNTS+ + H V +++
Sbjct: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 282 -NPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETI-LASSG 337
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G ++ + P + + + A + +P + +CS
Sbjct: 338 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 393
Query: 182 GCDNTVKVWKLYNGIW 197
DN ++VW++ I+
Sbjct: 394 SEDNIMQVWQMAENIY 409
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 58/233 (24%), Positives = 97/233 (41%)
Query: 26 LATASSDYSIKIIGVGNNTSQHL---AK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D++I + + + AK +GH V +V+W H S+ S + D
Sbjct: 193 LLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSW-HLLHESLFGSVADDQK 251
Query: 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWD 140
++IW ++N H + H + VN + + P+ LA GS+D ++++ R +
Sbjct: 252 LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR-NLKLK 309
Query: 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWKM 199
+ +H + V W+P + + L S G D + VW L G +
Sbjct: 310 LHSFE-SHKDEIFQVQWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQS 355
Query: 200 -----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + +W +A
Sbjct: 356 AEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQVWQMA 405
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 148 (57.2 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 40/128 (31%), Positives = 59/128 (46%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFG 69
H++TV +V ++ G L TAS D+ K+ + N + L GHK VAW HP
Sbjct: 287 HKNTVMEVKLNLNGNWLLTASRDHLCKLFDI-RNLKEELQVFRGHKKEATAVAW-HPVHE 344
Query: 70 SILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNIS 129
+ AS DG+++ W G E + H+ + S+ W H LG L GS+D
Sbjct: 345 GLFASGGSDGSLLFWHVGVEKE--VGGMEMAHEGMIWSLAW--HPLGHILCSGSNDHTSK 400
Query: 130 VFTARADG 137
+T G
Sbjct: 401 FWTRNRPG 408
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 142 (55.0 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 46/145 (31%), Positives = 69/145 (47%)
Query: 8 TGHEDTVHDVAMDY-YGKRLATASSDYSIKIIGVGN-NTSQHLAK-LSGHKGAVWEVAWA 64
+ HE V DV Y + LA+ S D + + + + S A+ + H G + VA+
Sbjct: 231 SSHEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAF- 289
Query: 65 HPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSS 124
+P ILA+CS D T+ +W N N+ + H E H+ V I ++PHE + LA S+
Sbjct: 290 NPHNDFILATCSTDKTIALWDLRNLNQRL--HTLEGHEDIVTKISFSPHEEPI-LASTSA 346
Query: 125 DGNISVFTARADGGWDTSRIDQAHP 149
D V WD SRI + P
Sbjct: 347 DRRTLV--------WDLSRIGEDQP 363
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 148 (57.2 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 40/128 (31%), Positives = 59/128 (46%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFG 69
H++TV +V ++ G L TAS D+ K+ + N + L GHK VAW HP
Sbjct: 283 HKNTVMEVKLNLNGNWLLTASRDHLCKLFDI-RNLKEELQVFRGHKKEATAVAW-HPVHE 340
Query: 70 SILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNIS 129
+ AS DG+++ W G E + H+ + S+ W H LG L GS+D
Sbjct: 341 GLFASGGSDGSLLFWHVGVEKE--VGGMEMAHEGMIWSLAW--HPLGHILCSGSNDHTSK 396
Query: 130 VFTARADG 137
+T G
Sbjct: 397 FWTRNRPG 404
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 148 (57.2 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 40/128 (31%), Positives = 59/128 (46%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFG 69
H++TV +V ++ G L TAS D+ K+ + N + L GHK VAW HP
Sbjct: 287 HKNTVMEVKLNLNGNWLLTASRDHLCKLFDI-RNLKEELQVFRGHKKEATAVAW-HPVHE 344
Query: 70 SILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNIS 129
+ AS DG+++ W G E + H+ + S+ W H LG L GS+D
Sbjct: 345 GLFASGGSDGSLLFWHVGVEKE--VGGMEMAHEGMIWSLAW--HPLGHILCSGSNDHTSK 400
Query: 130 VFTARADG 137
+T G
Sbjct: 401 FWTRNRPG 408
>UNIPROTKB|E1BCT7 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
EMBL:DAAA02003882 EMBL:DAAA02003883 EMBL:DAAA02003884
IPI:IPI00689135 RefSeq:NP_001193007.1 UniGene:Bt.32571
ProteinModelPortal:E1BCT7 Ensembl:ENSBTAT00000007859 GeneID:541270
KEGG:bta:541270 NextBio:20879105 Uniprot:E1BCT7
Length = 1336
Score = 148 (57.2 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 40/128 (31%), Positives = 59/128 (46%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFG 69
H++TV +V ++ G L TAS D+ K+ + N + L GHK VAW HP
Sbjct: 287 HKNTVMEVKLNLNGNWLLTASRDHLCKLFDI-RNLKEELQVFRGHKKEATAVAW-HPVHE 344
Query: 70 SILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNIS 129
+ AS DG+++ W G E + H+ + S+ W H LG L GS+D
Sbjct: 345 GLFASGGSDGSLLFWHVGVEKE--VGGMEMAHEGMIWSLAW--HPLGHILCSGSNDHTSK 400
Query: 130 VFTARADG 137
+T G
Sbjct: 401 FWTRNRPG 408
>UNIPROTKB|F1PV59 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00540000070914 KO:K15542 OMA:TVMEVKL
EMBL:AAEX03011835 RefSeq:XP_003639747.1 ProteinModelPortal:F1PV59
Ensembl:ENSCAFT00000006945 GeneID:100856093 KEGG:cfa:100856093
Uniprot:F1PV59
Length = 1336
Score = 148 (57.2 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 40/128 (31%), Positives = 59/128 (46%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFG 69
H++TV +V ++ G L TAS D+ K+ + N + L GHK VAW HP
Sbjct: 287 HKNTVMEVKLNLNGNWLLTASRDHLCKLFDI-RNLKEELQVFRGHKKEATAVAW-HPVHE 344
Query: 70 SILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNIS 129
+ AS DG+++ W G E + H+ + S+ W H LG L GS+D
Sbjct: 345 GLFASGGSDGSLLFWHVGVEKE--VGGMEMAHEGMIWSLAW--HPLGHILCSGSNDHTSK 400
Query: 130 VFTARADG 137
+T G
Sbjct: 401 FWTRNRPG 408
>UNIPROTKB|Q9C0J8 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005581 "collagen" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006301 "postreplication repair" evidence=NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 GO:GO:0007283
EMBL:CH471103 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006301 KO:K15542 EMBL:AC006011 EMBL:AB044749 EMBL:AK002156
EMBL:AK223319 EMBL:BC005401 EMBL:BC013990 EMBL:BC068484
EMBL:AL834365 IPI:IPI00106567 IPI:IPI00385811 IPI:IPI00432450
RefSeq:NP_001006623.1 RefSeq:NP_001006624.1 RefSeq:NP_060853.3
UniGene:Hs.554831 ProteinModelPortal:Q9C0J8 SMR:Q9C0J8
IntAct:Q9C0J8 PhosphoSite:Q9C0J8 DMDM:209572695 PaxDb:Q9C0J8
PRIDE:Q9C0J8 Ensembl:ENST00000322313 Ensembl:ENST00000393006
Ensembl:ENST00000409658 GeneID:55339 KEGG:hsa:55339 UCSC:uc002tpg.2
UCSC:uc002tpi.2 CTD:55339 GeneCards:GC02M128458 HGNC:HGNC:25651
HPA:HPA026897 neXtProt:NX_Q9C0J8 PharmGKB:PA134943440
HOGENOM:HOG000126810 HOVERGEN:HBG062379 InParanoid:Q9C0J8
OMA:TVMEVKL OrthoDB:EOG4V6ZG7 PhylomeDB:Q9C0J8 ChiTaRS:WDR33
GenomeRNAi:55339 NextBio:59651 ArrayExpress:Q9C0J8 Bgee:Q9C0J8
CleanEx:HS_WDR33 Genevestigator:Q9C0J8 GermOnline:ENSG00000136709
Uniprot:Q9C0J8
Length = 1336
Score = 148 (57.2 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 40/128 (31%), Positives = 59/128 (46%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFG 69
H++TV +V ++ G L TAS D+ K+ + N + L GHK VAW HP
Sbjct: 287 HKNTVMEVKLNLNGNWLLTASRDHLCKLFDI-RNLKEELQVFRGHKKEATAVAW-HPVHE 344
Query: 70 SILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNIS 129
+ AS DG+++ W G E + H+ + S+ W H LG L GS+D
Sbjct: 345 GLFASGGSDGSLLFWHVGVEKE--VGGMEMAHEGMIWSLAW--HPLGHILCSGSNDHTSK 400
Query: 130 VFTARADG 137
+T G
Sbjct: 401 FWTRNRPG 408
>FB|FBgn0034937 [details] [associations]
symbol:fzr2 "fizzy-related 2" species:7227 "Drosophila
melanogaster" [GO:0007140 "male meiosis" evidence=IEP] [GO:0008054
"cyclin catabolic process" evidence=IGI] [GO:0010458 "exit from
mitosis" evidence=IEP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE013599 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0007140 GO:GO:0008054
KO:K03364 GeneTree:ENSGT00580000081606 OrthoDB:EOG4G79F4
EMBL:AY051537 RefSeq:NP_611854.1 UniGene:Dm.4571 SMR:Q9W1F6
STRING:Q9W1F6 EnsemblMetazoa:FBtr0072146 GeneID:37808
KEGG:dme:Dmel_CG16783 UCSC:CG16783-RA CTD:37808 FlyBase:FBgn0034937
InParanoid:Q9W1F6 OMA:QISNLAW GenomeRNAi:37808 NextBio:805507
Uniprot:Q9W1F6
Length = 451
Score = 138 (53.6 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 37/123 (30%), Positives = 64/123 (52%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAK-LSGHKGAVWEVA 62
++I E + A+ + G RLA+ S D SI + N H+ + L GHK V +
Sbjct: 220 KQINRLEEHSARVTALAWCGNRLASGSRDRSILQRDI-RNPPTHITRCLRGHKLEVCGLQ 278
Query: 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKD-HVFEDHKSSVNSIDWAPHELGLCLAC 121
W+ P LAS D +++W +++W + + F++HK+ V ++ W+PH+ GL +
Sbjct: 279 WS-PS-NRYLASGGSDNRLLVW----TDDWPEPIYAFDEHKAVVKALGWSPHKSGLLASG 332
Query: 122 GSS 124
G S
Sbjct: 333 GGS 335
Score = 43 (20.2 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 5/18 (27%), Positives = 12/18 (66%)
Query: 176 QKLCSGGCDNTVKVWKLY 193
+ + +GG D T++ W ++
Sbjct: 414 ESIVTGGADETLRFWTVF 431
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 137 (53.3 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 37/118 (31%), Positives = 60/118 (50%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
TGH+ ++ V + +A+AS D SIK+ T ++LA L GH AV+++AW+
Sbjct: 369 TGHQALINQVLFSPDSRIVASASFDKSIKLWD--GRTGKYLASLRGHVAAVYQIAWSADS 426
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
+L S S D T+ +W + + + D H V ++DW+P G +A G D
Sbjct: 427 --RLLVSGSSDSTLKVW-DVKAQKLAMD--LPGHADEVYAVDWSPD--GQRVASGGKD 477
Score = 133 (51.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 41/152 (26%), Positives = 65/152 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH + V VA GK LA+ S D +++ + T K GH+ V ++W+ P
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCK--GHRHWVLSISWS-PD- 167
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP-HELGLC--LACGSSD 125
G LAS +G +++W + H + + W P H C +A S D
Sbjct: 168 GRKLASGCKNGQILLWDPSTGKQ--VGRTLAGHSKWITGLSWEPLHANPECRYVASSSKD 225
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSW 157
G++ ++ A G + RI H VT + W
Sbjct: 226 GSVRIWDTTA-GRCE--RILTGHTQSVTCLRW 254
Score = 45 (20.9 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 176 QKLCSGGCDNTVKVWK 191
Q++ SGG D +++W+
Sbjct: 469 QRVASGGKDKCLRIWR 484
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 137 (53.3 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 37/118 (31%), Positives = 60/118 (50%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
TGH+ ++ V + +A+AS D SIK+ T ++LA L GH AV+++AW+
Sbjct: 369 TGHQALINQVLFSPDSRIVASASFDKSIKLWD--GRTGKYLASLRGHVAAVYQIAWSADS 426
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
+L S S D T+ +W + + + D H V ++DW+P G +A G D
Sbjct: 427 --RLLVSGSSDSTLKVW-DVKAQKLATD--LPGHADEVYAVDWSPD--GQRVASGGKD 477
Score = 132 (51.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 43/152 (28%), Positives = 65/152 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH + V VA GK LA+ S D +++ + T K GH+ V ++W+ P
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCK--GHRHWVLSISWS-PD- 167
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP-HELGLC--LACGSSD 125
G LAS +G V++W + H + + W P H C +A S D
Sbjct: 168 GKKLASGCKNGQVLLWDPSTGLQ--VGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKD 225
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSW 157
G++ V+ A G + RI H VT + W
Sbjct: 226 GSVRVWDTTA-GRCE--RILTGHTQSVTCLRW 254
Score = 45 (20.9 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 176 QKLCSGGCDNTVKVWK 191
Q++ SGG D +++W+
Sbjct: 469 QRVASGGKDKCLRIWR 484
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 148 (57.2 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 40/128 (31%), Positives = 59/128 (46%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFG 69
H++TV +V ++ G L TAS D+ K+ + N + L GHK VAW HP
Sbjct: 288 HKNTVMEVKLNLNGNWLLTASRDHLCKLFDI-RNLKEELQVFRGHKKEATAVAW-HPVHE 345
Query: 70 SILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNIS 129
+ AS DG+++ W G E + H+ + S+ W H LG L GS+D
Sbjct: 346 GLFASGGSDGSLLFWHVGVEKE--VGGMEMAHEGMIWSLAW--HPLGHILCSGSNDHTSK 401
Query: 130 VFTARADG 137
+T G
Sbjct: 402 FWTRNRPG 409
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 137 (53.3 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 37/118 (31%), Positives = 60/118 (50%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
TGH+ ++ V + +A+AS D SIK+ T ++LA L GH AV+++AW+
Sbjct: 371 TGHQALINQVLFSPDSRIVASASFDKSIKLWD--GRTGKYLASLRGHVAAVYQIAWSADS 428
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
+L S S D T+ +W + + + D H V ++DW+P G +A G D
Sbjct: 429 --RLLVSGSSDSTLKVW-DVKAQKLTTD--LPGHADEVYAVDWSPD--GQRVASGGKD 479
Score = 134 (52.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 42/152 (27%), Positives = 65/152 (42%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH + V VA GK LA+ S D +++ + T K GH+ V ++W+ P
Sbjct: 114 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCK--GHRHWVLSISWS-PD- 169
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP-HELGLC--LACGSSD 125
G LAS +G +++W + H + + W P H C +A S D
Sbjct: 170 GKKLASGCKNGQILLWDPSTGTQ--VGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKD 227
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSW 157
G++ V+ A G + RI H VT + W
Sbjct: 228 GSVRVWDTTA-GRCE--RILTGHTQSVTCLRW 256
Score = 45 (20.9 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 176 QKLCSGGCDNTVKVWK 191
Q++ SGG D +++W+
Sbjct: 471 QRVASGGKDKCLRIWR 486
>POMBASE|SPAC343.04c [details] [associations]
symbol:SPAC343.04c "WD repeat protein, human WDR26
family, ubiquitin ligase complex subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034657 "GID complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044732 "mitotic spindle pole body" evidence=IDA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=ISO] [GO:0010969
"regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 PomBase:SPAC343.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044732
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045721
HSSP:P16649 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GO:GO:0034657 OrthoDB:EOG43R6WJ HOGENOM:HOG000160946 OMA:IRGQFYQ
PIR:T38653 RefSeq:NP_593424.1 ProteinModelPortal:Q9UT85
EnsemblFungi:SPAC343.04c.1 GeneID:2543079 KEGG:spo:SPAC343.04c
NextBio:20804107 Uniprot:Q9UT85
Length = 507
Score = 124 (48.7 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 39/120 (32%), Positives = 60/120 (50%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFG 69
H D V ++ + G+ LA+AS D + I V N + + +L GH V + W+ P
Sbjct: 212 HSDEVWQISYSHNGRYLASASKDKTAIIFDVVN--LKRVFRLIGHIDTVAYIRWS-PD-D 267
Query: 70 SILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNIS 129
L SCS D +VI+W + + E ++D+ H SV+ W P GL GS D +I+
Sbjct: 268 RYLLSCSCDKSVILW-DAFTGEKLRDY---KHGFSVSCCCWLPD--GLSFITGSPDCHIT 321
Score = 60 (26.2 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 25/78 (32%), Positives = 36/78 (46%)
Query: 166 LVGSGF--LDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGL 223
L+GS F D L SG D+ +++W +G K+ L H V VA+ P +
Sbjct: 430 LIGSCFGGKDDTFVL-SGSEDDKIRIWHRESG--KL--LATLSGHVKCVNYVAYNP---V 481
Query: 224 PKSTIASASEDGKVIIWT 241
ASA +D V IW+
Sbjct: 482 DPYQFASAGDDNTVRIWS 499
Score = 46 (21.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 20/68 (29%), Positives = 29/68 (42%)
Query: 222 GLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNI----LAVAD 277
G + + S SED K+ IW RE GK+L V V++ + A A
Sbjct: 437 GKDDTFVLSGSEDDKIRIWH--RES----GKLLATLSGHVKCVNYVAYNPVDPYQFASAG 490
Query: 278 GNNNVTLW 285
+N V +W
Sbjct: 491 DDNTVRIW 498
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 106 (42.4 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 40/140 (28%), Positives = 62/140 (44%)
Query: 2 PPQKIETGHEDTVHDV-AMDYYGKR---LATASSDYSIKIIGVGNNTSQHLAKLSGHKGA 57
PP ++ +V ++DY R T+S D ++K+ + S K H
Sbjct: 94 PPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFK--EHAYC 151
Query: 58 VWEVAWAHPKFGSILASCSFDGTVIIW--KEGNSNEWIKDHVFEDHKSSVNSIDWAPHEL 115
V++ W +PK G + AS S D T+ IW +E S I H FE + S DW ++
Sbjct: 152 VYQAVW-NPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFE-----ILSCDWNKYD- 204
Query: 116 GLCLACGSSDGNISVFTARA 135
LA S D + V+ R+
Sbjct: 205 DCILATSSVDKTVKVWDVRS 224
Score = 74 (31.1 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 31/111 (27%), Positives = 51/111 (45%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
L + D TVKVW + + +++ L H VR V ++P+ +S IAS S D V
Sbjct: 208 LATSSVDKTVKVWDVRS--YRVP-LAVLNGHGYAVRKVKFSPHR---RSLIASCSYDMSV 261
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWS-LTGNILAVADGNNNVTLWEE 287
+W E D G+ H + V + S L ++A + V +W++
Sbjct: 262 CLWDYMVE-DALVGRYDHHTEFAV-GIDMSVLVEGLMASTGWDELVYVWQQ 310
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 141 (54.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 53/213 (24%), Positives = 94/213 (44%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEV 61
+ I TGH V DVA + L + + D + I NNTS+ + H V +
Sbjct: 224 KNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCL 283
Query: 62 AWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLAC 121
++ +P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 284 SF-NPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETI-LAS 339
Query: 122 GSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LC 179
+D + V+ G ++ + P + + + A + +P + +C
Sbjct: 340 SGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWIIC 395
Query: 180 SGGCDNTVKVWKLYNGIWKMDC--FPALQMHTD 210
S DN ++VW++ ++ + PA ++ T+
Sbjct: 396 SVSEDNIMQVWQMAENVYNDEEPEIPASELETN 428
Score = 139 (54.0 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 61/233 (26%), Positives = 98/233 (42%)
Query: 26 LATASSDYSIKIIGVGNNTSQHL---AK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D++I + + +H AK +GH V +VAW H S+ S + D
Sbjct: 197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAW-HLLHESLFGSVADDQK 255
Query: 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWD 140
++IW N+N H + H + VN + + P+ LA GS+D ++++ R +
Sbjct: 256 LMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR-NLKLK 313
Query: 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWKM 199
+ +H + V W+P + + L S G D + VW L G +
Sbjct: 314 LHSFE-SHKDEIFQVQWSPHN-----------ETI--LASSGTDRRLHVWDLSKIGEEQS 359
Query: 200 -----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + +W +A
Sbjct: 360 TEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWIICSVSEDNIMQVWQMA 409
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 113 (44.8 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 45/170 (26%), Positives = 81/170 (47%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH + DVA RL +AS D ++K+ + + + L L GH V+ + P
Sbjct: 79 GHSLEISDVAWSSDSSRLVSASDDKTLKVWDM--RSGKCLKTLKGHSDFVFCCDFNPPS- 135
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
+++ S SFD +V IW E + + +K H ++++++ + G + GS DG
Sbjct: 136 -NLIVSGSFDESVKIW-EVKTGKCLK--TLSAHSDPISAVNFNCN--GSLIVSGSYDGLC 189
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
++ A A G + D+ +P V+ V ++P+ G + + LD KL
Sbjct: 190 RIWDA-ASGQCLRTLADEGNPP-VSFVKFSPN---GKYILTATLDNTLKL 234
Score = 99 (39.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 46/182 (25%), Positives = 82/182 (45%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH + V G+ LA++++D I I G + + L GH + +VAW+
Sbjct: 37 GHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKT--LYGHSLEISDVAWSSDS- 93
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
S L S S D T+ +W + S + +K + H V D+ P L ++ GS D ++
Sbjct: 94 -SRLVSASDDKTLKVW-DMRSGKCLK--TLKGHSDFVFCCDFNPPS-NLIVS-GSFDESV 147
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL---CSGGCDN 185
++ + T AH +++V++ G+L+ SG D + ++ SG C
Sbjct: 148 KIWEVKTGKCLKTL---SAHSDPISAVNF---NCNGSLIVSGSYDGLCRIWDAASGQCLR 201
Query: 186 TV 187
T+
Sbjct: 202 TL 203
Score = 66 (28.3 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 24/64 (37%), Positives = 31/64 (48%)
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASAS-EDGKVI 238
SG DN V +W L + LQ HTD V A P K+ IASA+ E+ K I
Sbjct: 270 SGSEDNMVYIWNLQT----KEIVQRLQGHTDVVISAACHPT----KNIIASAALENDKTI 321
Query: 239 -IWT 241
+W+
Sbjct: 322 KVWS 325
Score = 50 (22.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 184 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV 242
DNT+K+W G C H + + +A + + S SED V IW +
Sbjct: 229 DNTLKLWDYSRG----RCLKTYTGHKN-EKYCLFASFSVTGRKWVVSGSEDNMVYIWNL 282
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 141 (54.7 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 54/207 (26%), Positives = 93/207 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW------KEGNSNEWIKDHVFEDHKS 103
+L GH+ + ++W +P L S S D T+ +W KEG + K +F H +
Sbjct: 172 RLRGHQKEGYGLSW-NPNLSGCLLSASDDHTICLWDISTVPKEGKIVD-AKT-IFTGHTA 228
Query: 104 SVNSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161
V + W H L L GS D + ++ R++ S AH V +S+ P
Sbjct: 229 VVEDVSW--HLLHESLF-GSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPY- 284
Query: 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL 221
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 285 -------SEFI-----LATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVQWSPH- 328
Query: 222 GLPKSTIASASEDGKVIIWTVAREGDQ 248
++ +AS+ D ++ +W +++ G++
Sbjct: 329 --NETILASSGTDRRLNVWDLSKIGEE 353
Score = 135 (52.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 50/196 (25%), Positives = 86/196 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAW 63
I TGH V DV+ + L + + D + I NNTS+ + H V +++
Sbjct: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSF 281
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 282 -NPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETI-LASSG 337
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G + + P + + + A + +P + +CS
Sbjct: 338 TDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 393
Query: 182 GCDNTVKVWKLYNGIW 197
DN ++VW++ I+
Sbjct: 394 SEDNIMQVWQMAENIY 409
Score = 122 (48.0 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 58/233 (24%), Positives = 97/233 (41%)
Query: 26 LATASSDYSIKIIGVGNNTSQHL---AK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D++I + + + AK +GH V +V+W H S+ S + D
Sbjct: 193 LLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSW-HLLHESLFGSVADDQK 251
Query: 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWD 140
++IW ++N H + H + VN + + P+ LA GS+D ++++ R +
Sbjct: 252 LMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR-NLKLK 309
Query: 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWKM 199
+ +H + V W+P + + L S G D + VW L G +
Sbjct: 310 LHSFE-SHKDEIFQVQWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQS 355
Query: 200 -----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + +W +A
Sbjct: 356 PEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQVWQMA 405
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 123 (48.4 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 39/127 (30%), Positives = 63/127 (49%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH V G+ +A++SSD+SI++ V + H+ K GH+ +V V+++ P
Sbjct: 66 GHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLK--GHQRSVETVSFS-PD- 121
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
LAS +D I+W E S + H+ H S+ S D++P L A GS D +
Sbjct: 122 SKQLASGGWDKRAIVW-EVQSGRRV--HLLVGHCDSIQSSDFSPTSDSL--ATGSWDSTV 176
Query: 129 SVFTARA 135
++ RA
Sbjct: 177 HIWDLRA 183
Score = 53 (23.7 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 23/73 (31%), Positives = 28/73 (38%)
Query: 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL--VGSGFLDPVQ-KLCSGG 182
GNIS A G + D+ V + + P G V S P + KL S G
Sbjct: 198 GNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAG 257
Query: 183 CDNTVKVWKLYNG 195
TVKVW G
Sbjct: 258 YSRTVKVWDCLTG 270
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 139 (54.0 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 45/142 (31%), Positives = 67/142 (47%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH D + D G +LAT+S D ++K+ + + GH AVW W H
Sbjct: 392 GHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDC--ILTFEGHSRAVWSCTW-H-SC 447
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G+ +AS S D T IW + NS E + ++ H SVNSI++ P L S+D +
Sbjct: 448 GNFVASSSLDKTSKIW-DVNS-ERCRCTLY-GHTDSVNSIEFFP--FSNTLLTSSADKTL 502
Query: 129 SVFTARADGGWDTSRIDQAHPV 150
S++ AR G + S H +
Sbjct: 503 SIWDART-GICEQSLYGHMHSI 523
Score = 45 (20.9 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 178 LCSGGCDNTVKVW 190
L SGG D TV+ W
Sbjct: 618 LFSGGSDGTVRTW 630
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 122 (48.0 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFG 69
H D V+ G+R+A+ +D ++++ T + L + H+ V + A
Sbjct: 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKA--ETGEKLLDIKAHEDEV--LCCAFSSDD 669
Query: 70 SILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNIS 129
S +A+CS D V IW G + + + H +E+H VN + L LA GS+D +
Sbjct: 670 SYIATCSVDKKVKIWDSG-TGKLV--HTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLK 726
Query: 130 VF 131
++
Sbjct: 727 LW 728
Score = 71 (30.1 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 29/109 (26%), Positives = 42/109 (38%)
Query: 177 KLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGK 236
+L S D TVKVW + G + D H V A + + +S S D
Sbjct: 1057 RLLSWSFDGTVKVWNVITGRIERD----FTCHQGTVLSCA----ISSDATKFSSTSADKT 1108
Query: 237 VIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW 285
IW+ E L + V ++SL G +LA D N + +W
Sbjct: 1109 AKIWSFELPSPLHE---LKGHNSCVRCSAFSLDGILLATGDDNGEIRIW 1154
Score = 65 (27.9 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 33/117 (28%), Positives = 52/117 (44%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
L +G D+ +K+W L N + +C + HT+ V ++P+ L +AS S DG +
Sbjct: 716 LATGSNDSFLKLWDL-N---QKECRNTMFGHTNSVTHCRFSPDDEL----LASCSADGTL 767
Query: 238 IIWTVAREGDQWEGKVLHDF---KTPVYRV-------SWSLTGNILAVADGNNNVTL 284
+W V ++ V F + P V SWS G+ + VA N V L
Sbjct: 768 KLWDVRSANEKKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDRIIVA-AKNKVLL 823
Score = 63 (27.2 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
L S D+ ++VW W+ + + LQ H + V+D L S + S S DG V
Sbjct: 1018 LISSSEDSVIQVWN-----WQTEEYVFLQAHQETVKDFRL-----LRDSRLLSWSFDGTV 1067
Query: 238 IIWTV 242
+W V
Sbjct: 1068 KVWNV 1072
Score = 60 (26.2 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 187 VKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
V++W + + + DC + H WV V ++P+ G S+ +AS+D + +W
Sbjct: 864 VELWNIDSRVKVADC----RGHLSWVHGVMFSPD-G---SSFLTASDDQTIRVW 909
Score = 53 (23.7 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 169 SGF-LDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFP-ALQ----MHTDWVRDVAWAPN 220
S F LD + L +G + +++W + +G C P +++ H WV DV ++P+
Sbjct: 1133 SAFSLDGIL-LATGDDNGEIRIWNVSDGQLLHLCAPISIEEGTATHGGWVTDVCFSPD 1189
Score = 53 (23.7 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 21/92 (22%), Positives = 39/92 (42%)
Query: 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGL 223
G ++ K S D T K+W L+ H VR A++ + G+
Sbjct: 1086 GTVLSCAISSDATKFSSTSADKTAKIWSFE----LPSPLHELKGHNSCVRCSAFSLD-GI 1140
Query: 224 PKSTIASASEDGKVIIWTVAREGDQWEGKVLH 255
+A+ ++G++ IW V+ +G++LH
Sbjct: 1141 ---LLATGDDNGEIRIWNVS------DGQLLH 1163
Score = 46 (21.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 28/116 (24%), Positives = 48/116 (41%)
Query: 163 PGALVGSGFLDP-VQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL 221
P A V L P ++ + G + +K+ +L N F + H VR + + +
Sbjct: 960 PEAQVSCCCLSPHLEYVAFGDEEGAIKIIELPNN----RVFSSGIGHKKAVRHIQFTAD- 1014
Query: 222 GLPKSTIASASEDGKVIIWTVAREGD---QWEGKVLHDFKT--PVYRVSWSLTGNI 272
G T+ S+SED + +W E Q + + DF+ +SWS G +
Sbjct: 1015 G---KTLISSSEDSVIQVWNWQTEEYVFLQAHQETVKDFRLLRDSRLLSWSFDGTV 1067
>UNIPROTKB|A5PJS1 [details] [associations]
symbol:GNB5 "GNB5 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ
EMBL:DAAA02028995 EMBL:DAAA02028996 EMBL:BC142218 IPI:IPI00695391
RefSeq:NP_001092540.1 UniGene:Bt.48572 SMR:A5PJS1 MINT:MINT-6824860
STRING:A5PJS1 Ensembl:ENSBTAT00000004896 GeneID:535365
KEGG:bta:535365 InParanoid:A5PJS1 NextBio:20876717 Uniprot:A5PJS1
Length = 353
Score = 95 (38.5 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 40/178 (22%), Positives = 77/178 (43%)
Query: 120 ACGSSDGNISVFTARADGG---WD--TSRIDQA---HPVGVTSVSWAPSTAPGALVGSGF 171
AC ++ ++ + TA DG WD + ++ Q+ H V + APS G+ F
Sbjct: 158 ACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSET-----GNTF 212
Query: 172 LDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA 231
+ SGGCD VW + +G C A + H + V + P+ G AS
Sbjct: 213 V-------SGGCDKKAMVWDMRSG----QCVQAFETHESDINSVRYYPS-G---DAFASG 257
Query: 232 SEDGKVIIWTVAREGDQWEGKVLHDFKTPVY---RVSWSLTGNILAVADGNNNVTLWE 286
S+D ++ + + + ++ ++ ++ V +SL+G +L + + +W+
Sbjct: 258 SDDATCRLYDLRADREV----AIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 311
Score = 87 (35.7 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 28/86 (32%), Positives = 37/86 (43%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDW 110
L GH V + W K L S S DG VI+W +N K+H + V + +
Sbjct: 59 LKGHGNKVLCMDWCKDK--RRLVSSSQDGKVIVWDSFTTN---KEHAVTMPCTWVMACAY 113
Query: 111 APHELGLCLACGSSDGNISVFTARAD 136
AP G +ACG D SV+ D
Sbjct: 114 APS--GCAIACGGLDNKCSVYPLTFD 137
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 100 (40.3 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 27/107 (25%), Positives = 53/107 (49%)
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
+G D T ++W ++ G +C HT+ V +A +P+ G +AS EDG + +
Sbjct: 618 TGSSDKTCRMWDVHTG----NCVRVFLGHTNSVNCLAVSPD-G---RWLASGGEDGIICV 669
Query: 240 WTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
W + G + + H + +Y +++S G +L +N+V +W+
Sbjct: 670 WDIG-SGRRLKSMRGHA-RASLYSLAFSRDGTVLVSGCADNSVRVWD 714
Score = 90 (36.7 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 29/117 (24%), Positives = 53/117 (45%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH V+ V+ K L + S D ++++ + T+ L GH VW+V ++ P
Sbjct: 515 GHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTA--LVSYKGHTQPVWDVKFS-P-L 570
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
G + S D T +W ++ +F H + V+ +++ P+ + GSSD
Sbjct: 571 GHYFVTASHDQTARLWA---TDHIYPLRIFAGHINDVDCVEFHPNSN--YVFTGSSD 622
Score = 68 (29.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 23/80 (28%), Positives = 36/80 (45%)
Query: 46 QHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSV 105
++ KL GH G V+ V+++ P L SCS D TV +W + ++ H V
Sbjct: 508 ENTRKLIGHSGPVYGVSFS-PD-NKYLLSCSEDKTVRLWSLDTYTALVS---YKGHTQPV 562
Query: 106 NSIDWAPHELGLCLACGSSD 125
+ ++P LG S D
Sbjct: 563 WDVKFSP--LGHYFVTASHD 580
>CGD|CAL0002151 [details] [associations]
symbol:ARC40 species:5476 "Candida albicans" [GO:0030479
"actin cortical patch" evidence=IEA] [GO:0051286 "cell tip"
evidence=IEA] [GO:0005885 "Arp2/3 protein complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0032153 "cell division
site" evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0034314 "Arp2/3 complex-mediated actin nucleation"
evidence=IEA] [GO:0033205 "cell cycle cytokinesis" evidence=IEA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0036170 "filamentous growth of a population of unicellular
organisms in response to starvation" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0002151 GO:GO:0071216 GO:GO:0036180 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005856 eggNOG:COG2319 GO:GO:0009267
GO:GO:0036170 KO:K05757 GO:GO:0030833 PANTHER:PTHR10709
EMBL:AACQ01000125 RefSeq:XP_713498.1 ProteinModelPortal:Q59V79
STRING:Q59V79 GeneID:3644866 KEGG:cal:CaO19.3873 Uniprot:Q59V79
Length = 384
Score = 139 (54.0 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 41/138 (29%), Positives = 66/138 (47%)
Query: 3 PQKIET--GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
PQ I H+ TV V + G ++ T S D + + N + L A
Sbjct: 49 PQLIAVLKDHDKTVTSVDISPDGSKILTCSQDRNALVWEYANGEYKPTLVLLRINRAATV 108
Query: 61 VAWAHPKFGSILASCSFDGTVII-WKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCL 119
W+ P GS A S D + + + E ++ W+ H+ + KS++ +IDW P+ G+ L
Sbjct: 109 CRWS-PD-GSKFAVGSSDRIIAVCYYEEENDWWVSKHLKKPLKSTITTIDWHPN--GVLL 164
Query: 120 ACGSSDGNISVFTARADG 137
ACGS+DG++ VF+ G
Sbjct: 165 ACGSTDGHVRVFSGYIKG 182
>UNIPROTKB|Q59V79 [details] [associations]
symbol:ARC40 "Putative uncharacterized protein ARC40"
species:237561 "Candida albicans SC5314" [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0002151 GO:GO:0071216
GO:GO:0036180 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
eggNOG:COG2319 GO:GO:0009267 GO:GO:0036170 KO:K05757 GO:GO:0030833
PANTHER:PTHR10709 EMBL:AACQ01000125 RefSeq:XP_713498.1
ProteinModelPortal:Q59V79 STRING:Q59V79 GeneID:3644866
KEGG:cal:CaO19.3873 Uniprot:Q59V79
Length = 384
Score = 139 (54.0 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 41/138 (29%), Positives = 66/138 (47%)
Query: 3 PQKIET--GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE 60
PQ I H+ TV V + G ++ T S D + + N + L A
Sbjct: 49 PQLIAVLKDHDKTVTSVDISPDGSKILTCSQDRNALVWEYANGEYKPTLVLLRINRAATV 108
Query: 61 VAWAHPKFGSILASCSFDGTVII-WKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCL 119
W+ P GS A S D + + + E ++ W+ H+ + KS++ +IDW P+ G+ L
Sbjct: 109 CRWS-PD-GSKFAVGSSDRIIAVCYYEEENDWWVSKHLKKPLKSTITTIDWHPN--GVLL 164
Query: 120 ACGSSDGNISVFTARADG 137
ACGS+DG++ VF+ G
Sbjct: 165 ACGSTDGHVRVFSGYIKG 182
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 122 (48.0 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 45/151 (29%), Positives = 67/151 (44%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFG 69
H TV V G+ L TAS D ++K+ + + L L+ H V A P G
Sbjct: 102 HTATVRSVHFCSDGQSLVTASDDKTVKVWST--HRQRFLFSLTQHINWV-RCAKFSPD-G 157
Query: 70 SILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNIS 129
++ S S D TV +W + S E I H + +H V +D+ H G C+A D +
Sbjct: 158 RLIVSASDDKTVKLWDK-TSRECI--HSYCEHGGFVTYVDF--HPSGTCIAAAGMDNTVK 212
Query: 130 VFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
V+ AR + Q H V ++S+ PS
Sbjct: 213 VWDARTHR---LLQHYQLHSAAVNALSFHPS 240
Score = 94 (38.1 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 34/119 (28%), Positives = 54/119 (45%)
Query: 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230
F Q L + D TVKVW + + F +L H +WVR ++P+ L I S
Sbjct: 111 FCSDGQSLVTASDDKTVKVWSTHR---QRFLF-SLTQHINWVRCAKFSPDGRL----IVS 162
Query: 231 ASEDGKVIIWTVAREGDQWEGKVLHDFKTP---VYRVSWSLTGNILAVADGNNNVTLWE 286
AS+D V +W D+ + +H + V V + +G +A A +N V +W+
Sbjct: 163 ASDDKTVKLW------DKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD 215
Score = 89 (36.4 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 32/104 (30%), Positives = 51/104 (49%)
Query: 53 GHKGAVWEVAWA-HPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWA 111
GH+ AV V ++ + K LAS S D T++IW + + + F HK +V ++++
Sbjct: 17 GHRDAVTCVDFSLNTKH---LASGSMDSTLMIW---HMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 112 PHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSV 155
P G LA GS D + ++ G S + +AH V SV
Sbjct: 71 PS--GHLLASGSRDKTVRIWVPNVKG---ESTVFRAHTATVRSV 109
Score = 75 (31.5 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 30/112 (26%), Positives = 50/112 (44%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ + G DNTVKVW Q+H+ V +++ P+ G + + +AS D +
Sbjct: 202 IAAAGMDNTVKVWDARTH----RLLQHYQLHSAAVNALSFHPS-G---NYLITASSDSTL 253
Query: 238 IIWTVAREGDQWEGKVL---HDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
I D EG++L H + P V++S TG A + V +W+
Sbjct: 254 KIL------DLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 96 (38.9 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 41/178 (23%), Positives = 77/178 (43%)
Query: 120 ACGSSDGNISVFTARADGG---WD--TSRIDQA---HPVGVTSVSWAPSTAPGALVGSGF 171
AC ++ ++ + TA DG WD + ++ Q+ H V + APS G+ F
Sbjct: 158 ACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSET-----GNTF 212
Query: 172 LDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA 231
+ SGGCD VW + +G C A + H V V + P+ G AS
Sbjct: 213 V-------SGGCDKKAMVWDMRSG----QCVQAFETHESDVNSVRYYPS-G---DAFASG 257
Query: 232 SEDGKVIIWTVAREGDQWEGKVLHDFKTPVY---RVSWSLTGNILAVADGNNNVTLWE 286
S+D ++ + + + ++ ++ ++ V +SL+G +L + + +W+
Sbjct: 258 SDDATCRLYDLRADREV----AIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 311
Score = 85 (35.0 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 27/86 (31%), Positives = 37/86 (43%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDW 110
L GH V + W K + S S DG VI+W +N K+H + V + +
Sbjct: 59 LKGHGNKVLCMDWCKDK--RRIVSSSQDGKVIVWDSFTTN---KEHAVTMPCTWVMACAY 113
Query: 111 APHELGLCLACGSSDGNISVFTARAD 136
AP G +ACG D SV+ D
Sbjct: 114 APS--GCAIACGGLDNKCSVYPLTFD 137
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 139 (54.0 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 39/124 (31%), Positives = 67/124 (54%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
TGH+D + D DY GK +ATAS+D + +I T + +AKL GH+G + ++++ +P+
Sbjct: 300 TGHDDEILDSCFDYTGKLIATASADGTARIFSAA--TRKCIAKLEGHEGEISKISF-NPQ 356
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G+ L + S D T IW + + + ++ V E H + S A + G + GS D
Sbjct: 357 -GNHLLTGSSDKTARIW-DAQTGQCLQ--VLEGHTDEIFSC--AFNYKGNIVITGSKDNT 410
Query: 128 ISVF 131
++
Sbjct: 411 CRIW 414
Score = 104 (41.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 36/156 (23%), Positives = 69/156 (44%)
Query: 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWA 64
K+ H + +VA++ G T S D + K+ + + L L GH+ V+ +A+
Sbjct: 86 KVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASG--EELNTLEGHRNVVYAIAFN 143
Query: 65 HPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSS 124
+P +G +A+ SFD T +W + H F H + + + + P +A GS
Sbjct: 144 NP-YGDKIATGSFDKTCKLWSVETGKCY---HTFRGHTAEIVCLSFNPQST--LVATGSM 197
Query: 125 DGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
D ++ + G + + + H + S+S+ S
Sbjct: 198 DTTAKLWDIQ--NGEEVYTL-RGHSAEIISLSFNTS 230
Score = 77 (32.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 27/109 (24%), Positives = 45/109 (41%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ +G D T K+W NG C L H D + D + IA+AS DG
Sbjct: 276 ILTGSMDKTCKLWDATNG----KCVATLTGHDDEILDSCF----DYTGKLIATASADGTA 327
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
I++ A + K L + + ++S++ GN L + +W+
Sbjct: 328 RIFSAATR--KCIAK-LEGHEGEISKISFNPQGNHLLTGSSDKTARIWD 373
Score = 38 (18.4 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 5/12 (41%), Positives = 9/12 (75%)
Query: 180 SGGCDNTVKVWK 191
+G DNT ++W+
Sbjct: 404 TGSKDNTCRIWR 415
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 127 (49.8 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 53/176 (30%), Positives = 78/176 (44%)
Query: 44 TSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKS 103
T + LSGHK A+ V W+ + + S S+D T+ +W + + +K +K
Sbjct: 246 TRTPIVTLSGHKEAISSVLWSDAEE---ICSASWDHTIGVWDVESGS--LKS-TLTGNKV 299
Query: 104 SVNSIDWAPHELGLC--LACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161
N I ++P LC LA GS+D +I ++ R G S +H VTSV W+P+
Sbjct: 300 -FNCISYSP----LCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTH 354
Query: 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAW 217
Q+L SG DN VK+W + K + L H D V V W
Sbjct: 355 E-------------QQLISGSLDNIVKLWDTRS--CKAPLYD-LAAHEDKVLSVDW 394
Score = 123 (48.4 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 62/288 (21%), Positives = 114/288 (39%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHP-KF 68
H+D + A++ + + T S D + +I ++ + + + GH V +VAW
Sbjct: 100 HDDWIS--AIEGAEEWILTGSYDKTSRI---WSSEGKSIMTIVGHTDVVKDVAWVKKDSL 154
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKD-HVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
+L S S D T+++W+ +K H H SV+SI A G GS D
Sbjct: 155 SCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSI--AVDSTGTRFCSGSWDKM 212
Query: 128 ISVFTARADGGWD-----TSRI---DQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLC 179
+ +++ D T+R + +G+T + + S +++C
Sbjct: 213 LKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWSDAEEIC 272
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
S D+T+ VW + +G K + ++++P L K +AS S D + +
Sbjct: 273 SASWDHTIGVWDVESGSLKSTLTGNKVFNC-----ISYSP---LCKR-LASGSTDRHIRL 323
Query: 240 WTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVT-LWE 286
W + L V V WS T ++ +N+ LW+
Sbjct: 324 WDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWD 371
Score = 52 (23.4 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKI 37
GH +V +A+D G R + S D +KI
Sbjct: 187 GHAGSVDSIAVDSTGTRFCSGSWDKMLKI 215
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 140 (54.3 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 47/170 (27%), Positives = 71/170 (41%)
Query: 6 IETGHEDTVHDVAMDYYGK---RLATASSDYSIKIIGVGNNT-SQHLAKLSGHKGAVWEV 61
+ T ++ A+D+ K RLAT + SI + +T GH +V ++
Sbjct: 243 LHTISNHSIEGYALDWSPKIAGRLATGDCNNSIFVTNASESTWKTDTQAFKGHTESVEDI 302
Query: 62 AWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLAC 121
W+ P + ASCS D TV IW I + H + VN I W+ + L
Sbjct: 303 QWS-PSEEKVFASCSIDQTVRIWDIRKPKPAI---TVKAHTADVNVISWS-RNVEYLLVS 357
Query: 122 GSSDGNISVFTARADGGWDTSRID--QAHPVGVTSVSWAPSTAPGALVGS 169
G DG+ V+ RA D S + + H +TS+ W P +V S
Sbjct: 358 GCDDGSFRVWDLRAFK--DNSPVSDFKYHTGPITSIEWNPYEESQVIVSS 405
Score = 98 (39.6 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 39/163 (23%), Positives = 67/163 (41%)
Query: 10 HEDTVHDV-AMDYYGKRLATASSDYSIKIIGVGNNT------------SQHLAKLSGHKG 56
H V+ + +MD +AT S + S+ I + N+ + L +S H
Sbjct: 192 HNGAVNRIRSMDQQSNIVATWSDNRSVYIWNIANHLKALDNETVAPKQTAPLHTISNHSI 251
Query: 57 AVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKD-HVFEDHKSSVNSIDWAPHEL 115
+ + W+ PK LA+ + ++ + S W D F+ H SV I W+P E
Sbjct: 252 EGYALDWS-PKIAGRLATGDCNNSIFVTNASEST-WKTDTQAFKGHTESVEDIQWSPSEE 309
Query: 116 GLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWA 158
+ +C S D + ++ R T + AH V +SW+
Sbjct: 310 KVFASC-SIDQTVRIWDIRKPKPAITVK---AHTADVNVISWS 348
Score = 71 (30.1 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 24/79 (30%), Positives = 37/79 (46%)
Query: 175 VQKLCSGGCDN-TVKVWKLYNGIWKMDCFPA--LQMHTDWVRDVAWAPNLGLPKSTIASA 231
V+ L GCD+ + +VW L +K D P + HT + + W P +S + +
Sbjct: 351 VEYLLVSGCDDGSFRVWDLR--AFK-DNSPVSDFKYHTGPITSIEWNP---YEESQVIVS 404
Query: 232 SEDGKVIIWTVAREGDQWE 250
S D +V IW + E D E
Sbjct: 405 SSDDQVTIWDFSLEEDTEE 423
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 53/208 (25%), Positives = 83/208 (39%)
Query: 52 SGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEW-IKDHVFEDHKSSVNSIDW 110
+GH G + + W+ P+ L + + +W + W + F H SV + W
Sbjct: 210 AGHMGEGFALDWS-PRVPGRLLTGDCQKNIHLWTPTDGGSWNVDQRPFVGHTRSVEDLQW 268
Query: 111 APHELGLCLACGSSDGNISVFTARADGGWDTSRIDQA-HPVGVTSVSWAPSTAPGALVGS 169
+P E + +C S+D +I ++ RA G A H V +SW+
Sbjct: 269 SPTEDTVFASC-SADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSRR--------- 318
Query: 170 GFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPA-LQMHTDWVRDVAWAPNLGLPKSTI 228
+P L SGG D T+KVW L +K A + H V V W P
Sbjct: 319 ---EPF--LLSGGDDGTLKVWDLRQ--FKSGSPVATFKQHVAPVTSVEWHPQ---DSGVF 368
Query: 229 ASASEDGKVIIWTVAREGDQWEGKVLHD 256
A++ D ++ W +A E D G+ D
Sbjct: 369 AASGADNQITQWDLAVERDPESGETETD 396
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 54/207 (26%), Positives = 93/207 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW------KEGNSNEWIKDHVFEDHKS 103
+L GH+ + ++W +P L S S D T+ +W KEG + K +F H +
Sbjct: 137 RLRGHQKEGYGLSW-NPNLSGHLLSASDDHTICLWDISAVPKEGKVVD-AKT-IFTGHTA 193
Query: 104 SVNSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161
V + W H L L GS D + ++ R++ S AH V +S+ P
Sbjct: 194 VVEDVSW--HLLHESLF-GSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY- 249
Query: 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL 221
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 250 -------SEFI-----LATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVQWSPH- 293
Query: 222 GLPKSTIASASEDGKVIIWTVAREGDQ 248
++ +AS+ D ++ +W +++ G++
Sbjct: 294 --NETILASSGTDRRLNVWDLSKIGEE 318
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 50/196 (25%), Positives = 86/196 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAW 63
I TGH V DV+ + L + + D + I NNTS+ + H V +++
Sbjct: 187 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 246
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 247 -NPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETI-LASSG 302
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G + + P + + + A + +P + +CS
Sbjct: 303 TDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 358
Query: 182 GCDNTVKVWKLYNGIW 197
DN ++VW++ I+
Sbjct: 359 SEDNIMQVWQMAENIY 374
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 60/233 (25%), Positives = 96/233 (41%)
Query: 26 LATASSDYSI---KIIGVGNNTSQHLAK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D++I I V AK +GH V +V+W H S+ S + D
Sbjct: 158 LLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW-HLLHESLFGSVADDQK 216
Query: 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWD 140
++IW ++N H + H + VN + + P+ LA GS+D ++++ R +
Sbjct: 217 LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR-NLKLK 274
Query: 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWKM 199
+ +H + V W+P + + L S G D + VW L G +
Sbjct: 275 LHSFE-SHKDEIFQVQWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQS 320
Query: 200 -----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + +W +A
Sbjct: 321 PEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQVWQMA 370
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 83/310 (26%), Positives = 135/310 (43%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH+ + + + GK+LATAS D + + + + + GHK V V ++ P
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAY--RYVGHKDVVTSVQFS-PH- 71
Query: 69 GSILASCSFDGTVIIW---KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
G++LAS S D TV +W K G +E F+ H + V S+D++ G LA S D
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSE------FKAHTAPVRSVDFSAD--GQFLATASED 123
Query: 126 GNISV---------FTARADGGWDTSRIDQAHPVG--VTSVS-------WAPSTAP---- 163
+I V ++ W R + P G + S S W +
Sbjct: 124 KSIKVWSMYRQRFLYSLYRHTHW--VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 164 -GALVG-SGFLD--PVQK-LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWA 218
VG + F+D P + S G D TVKVW + + K+ Q+H+ V +++
Sbjct: 182 FSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR--VNKL--LQHYQVHSGGVNCISFH 237
Query: 219 PNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKT---PVYRVSWSLTGNILAV 275
P+ + + +AS DG + I D EG++++ + PV+ VS+S G + A
Sbjct: 238 PS----DNYLVTASSDGTLKIL------DLLEGRLIYTLQGHTGPVFTVSFSKGGELFAS 287
Query: 276 ADGNNNVTLW 285
+ V LW
Sbjct: 288 GGADTQVLLW 297
>RGD|620477 [details] [associations]
symbol:Cdc20 "cell division cycle 20" species:10116 "Rattus
norvegicus" [GO:0000922 "spindle pole" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005680 "anaphase-promoting
complex" evidence=IEA;ISO;ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008284
"positive regulation of cell proliferation" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IEA;ISO] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0031915 "positive regulation of
synaptic plasticity" evidence=IEA;ISO;ISS] [GO:0040020 "regulation
of meiosis" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050773 "regulation of dendrite development"
evidence=IMP] [GO:0051301 "cell division" evidence=IEA] [GO:0051488
"activation of anaphase-promoting complex activity"
evidence=IEA;ISO;ISS] [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA;ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 RGD:620477
GO:GO:0005813 GO:GO:0048471 GO:GO:0043234 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0016567
GO:GO:0005680 GO:GO:0050773 GO:GO:0000922 GO:GO:0031145
GO:GO:0090129 GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 KO:K03363
CTD:991 HOGENOM:HOG000195514 HOVERGEN:HBG001024 OrthoDB:EOG4CC414
EMBL:U05341 EMBL:AF052695 EMBL:BC085691 IPI:IPI00382084 PIR:B56021
RefSeq:NP_741990.1 UniGene:Rn.9262 ProteinModelPortal:Q62623
IntAct:Q62623 STRING:Q62623 PhosphoSite:Q62623 PRIDE:Q62623
GeneID:64515 KEGG:rno:64515 UCSC:RGD:620477 InParanoid:Q62623
NextBio:613310 ArrayExpress:Q62623 Genevestigator:Q62623
GermOnline:ENSRNOG00000028415 Uniprot:Q62623
Length = 499
Score = 131 (51.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 40/127 (31%), Positives = 59/127 (46%)
Query: 47 HLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEG-NSNEWIKDHVFEDHKSSV 105
H+A LSGH V + WA P G LAS D V +W G + W+ F H+ +V
Sbjct: 301 HVATLSGHSQEVCGLRWA-PD-GRHLASGGNDNIVNVWPSGPGESGWVPLQTFTQHQGAV 358
Query: 106 NSIDWAPHELG-LCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPG 164
++ W P + L G+SD +I ++ + G S +D H V S+ W+P
Sbjct: 359 KAVAWCPWQSNILATGGGTSDRHIRIWNVCS--GACLSAVD-VHSQ-VCSILWSPHYKE- 413
Query: 165 ALVGSGF 171
+ G GF
Sbjct: 414 LISGHGF 420
Score = 117 (46.2 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 46/184 (25%), Positives = 75/184 (40%)
Query: 12 DTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSI 71
D + VA G LA +S+ +++ V + L ++ H V ++W I
Sbjct: 227 DYISSVAWIKEGNYLAVGTSNAEVQLWDV--QQQKRLRNMTSHSARVSSLSWN----SYI 280
Query: 72 LASCSFDGTVIIWKEGNSNEWIKDHV--FEDHKSSVNSIDWAPHELGLCLACGSSDGNIS 129
L+S S G + + + HV H V + WAP G LA G +D ++
Sbjct: 281 LSSGSRSGHI----HHHDVRVAEHHVATLSGHSQEVCGLRWAPD--GRHLASGGNDNIVN 334
Query: 130 VF-TARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDP---VQKLCSGGCDN 185
V+ + + GW + H V +V+W P + G G D + +CSG C +
Sbjct: 335 VWPSGPGESGWVPLQTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSGACLS 394
Query: 186 TVKV 189
V V
Sbjct: 395 AVDV 398
Score = 49 (22.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
G N + +WK Y + K+ L+ HT V + +P+ G +T+ASA+ D + +W
Sbjct: 419 GFAQNQLVIWK-YPTMAKV---AELKGHTARVLSLTMSPD-G---ATVASAAADETLRLW 470
>UNIPROTKB|Q62623 [details] [associations]
symbol:Cdc20 "Cell division cycle protein 20 homolog"
species:10116 "Rattus norvegicus" [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 RGD:620477 GO:GO:0005813 GO:GO:0048471
GO:GO:0043234 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284
eggNOG:COG2319 GO:GO:0016567 GO:GO:0005680 GO:GO:0050773
GO:GO:0000922 GO:GO:0031145 GO:GO:0090129 GO:GO:0031915
GO:GO:0040020 GO:GO:0051488 KO:K03363 CTD:991 HOGENOM:HOG000195514
HOVERGEN:HBG001024 OrthoDB:EOG4CC414 EMBL:U05341 EMBL:AF052695
EMBL:BC085691 IPI:IPI00382084 PIR:B56021 RefSeq:NP_741990.1
UniGene:Rn.9262 ProteinModelPortal:Q62623 IntAct:Q62623
STRING:Q62623 PhosphoSite:Q62623 PRIDE:Q62623 GeneID:64515
KEGG:rno:64515 UCSC:RGD:620477 InParanoid:Q62623 NextBio:613310
ArrayExpress:Q62623 Genevestigator:Q62623
GermOnline:ENSRNOG00000028415 Uniprot:Q62623
Length = 499
Score = 131 (51.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 40/127 (31%), Positives = 59/127 (46%)
Query: 47 HLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEG-NSNEWIKDHVFEDHKSSV 105
H+A LSGH V + WA P G LAS D V +W G + W+ F H+ +V
Sbjct: 301 HVATLSGHSQEVCGLRWA-PD-GRHLASGGNDNIVNVWPSGPGESGWVPLQTFTQHQGAV 358
Query: 106 NSIDWAPHELG-LCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPG 164
++ W P + L G+SD +I ++ + G S +D H V S+ W+P
Sbjct: 359 KAVAWCPWQSNILATGGGTSDRHIRIWNVCS--GACLSAVD-VHSQ-VCSILWSPHYKE- 413
Query: 165 ALVGSGF 171
+ G GF
Sbjct: 414 LISGHGF 420
Score = 117 (46.2 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 46/184 (25%), Positives = 75/184 (40%)
Query: 12 DTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSI 71
D + VA G LA +S+ +++ V + L ++ H V ++W I
Sbjct: 227 DYISSVAWIKEGNYLAVGTSNAEVQLWDV--QQQKRLRNMTSHSARVSSLSWN----SYI 280
Query: 72 LASCSFDGTVIIWKEGNSNEWIKDHV--FEDHKSSVNSIDWAPHELGLCLACGSSDGNIS 129
L+S S G + + + HV H V + WAP G LA G +D ++
Sbjct: 281 LSSGSRSGHI----HHHDVRVAEHHVATLSGHSQEVCGLRWAPD--GRHLASGGNDNIVN 334
Query: 130 VF-TARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDP---VQKLCSGGCDN 185
V+ + + GW + H V +V+W P + G G D + +CSG C +
Sbjct: 335 VWPSGPGESGWVPLQTFTQHQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSGACLS 394
Query: 186 TVKV 189
V V
Sbjct: 395 AVDV 398
Score = 49 (22.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
G N + +WK Y + K+ L+ HT V + +P+ G +T+ASA+ D + +W
Sbjct: 419 GFAQNQLVIWK-YPTMAKV---AELKGHTARVLSLTMSPD-G---ATVASAAADETLRLW 470
>UNIPROTKB|Q6PNB6 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9986 "Oryctolagus cuniculus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:10681
OrthoDB:EOG4XWFXZ EMBL:AY591252 RefSeq:NP_001075639.1
UniGene:Ocu.3141 ProteinModelPortal:Q6PNB6 SMR:Q6PNB6
GeneID:100008941 Uniprot:Q6PNB6
Length = 353
Score = 95 (38.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 40/178 (22%), Positives = 77/178 (43%)
Query: 120 ACGSSDGNISVFTARADGG---WD--TSRIDQA---HPVGVTSVSWAPSTAPGALVGSGF 171
AC ++ ++ + TA DG WD + ++ Q+ H V + APS G+ F
Sbjct: 158 ACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSET-----GNTF 212
Query: 172 LDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA 231
+ SGGCD VW + +G C A + H + V + P+ G AS
Sbjct: 213 V-------SGGCDKKAMVWDMRSG----QCVQAFETHESDINSVRYYPS-G---DAFASG 257
Query: 232 SEDGKVIIWTVAREGDQWEGKVLHDFKTPVY---RVSWSLTGNILAVADGNNNVTLWE 286
S+D ++ + + + ++ ++ ++ V +SL+G +L + + +W+
Sbjct: 258 SDDATCRLYDLRADREV----AIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 311
Score = 85 (35.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 27/86 (31%), Positives = 37/86 (43%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDW 110
L GH V + W K + S S DG VI+W +N K+H + V + +
Sbjct: 59 LKGHGNKVLCMDWCKDK--RRIVSSSQDGKVIVWDSFTTN---KEHAVTMPCTWVMACAY 113
Query: 111 APHELGLCLACGSSDGNISVFTARAD 136
AP G +ACG D SV+ D
Sbjct: 114 APS--GCAIACGGLDNKCSVYPLTFD 137
>MGI|MGI:101848 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein),
beta 5" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0032794 "GTPase activating protein binding" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0044297 "cell body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:U69145 InterPro:IPR001632 MGI:MGI:101848
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ EMBL:L34290 EMBL:BC016135
IPI:IPI00127930 IPI:IPI00378017 PIR:A54969 RefSeq:NP_034443.1
RefSeq:NP_619733.1 UniGene:Mm.17604 PDB:2PBI PDBsum:2PBI
ProteinModelPortal:P62881 SMR:P62881 DIP:DIP-264N IntAct:P62881
STRING:P62881 PhosphoSite:P62881 PaxDb:P62881 PRIDE:P62881
Ensembl:ENSMUST00000076889 GeneID:14697 KEGG:mmu:14697
UCSC:uc009qry.1 InParanoid:P62881 EvolutionaryTrace:P62881
NextBio:286651 Bgee:P62881 Genevestigator:P62881
GermOnline:ENSMUSG00000032192 Uniprot:P62881
Length = 395
Score = 96 (38.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 41/178 (23%), Positives = 77/178 (43%)
Query: 120 ACGSSDGNISVFTARADGG---WD--TSRIDQA---HPVGVTSVSWAPSTAPGALVGSGF 171
AC ++ ++ + TA DG WD + ++ Q+ H V + APS G+ F
Sbjct: 200 ACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSET-----GNTF 254
Query: 172 LDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA 231
+ SGGCD VW + +G C A + H V V + P+ G AS
Sbjct: 255 V-------SGGCDKKAMVWDMRSG----QCVQAFETHESDVNSVRYYPS-G---DAFASG 299
Query: 232 SEDGKVIIWTVAREGDQWEGKVLHDFKTPVY---RVSWSLTGNILAVADGNNNVTLWE 286
S+D ++ + + + ++ ++ ++ V +SL+G +L + + +W+
Sbjct: 300 SDDATCRLYDLRADREV----AIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 353
Score = 85 (35.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 27/86 (31%), Positives = 37/86 (43%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDW 110
L GH V + W K + S S DG VI+W +N K+H + V + +
Sbjct: 101 LKGHGNKVLCMDWCKDK--RRIVSSSQDGKVIVWDSFTTN---KEHAVTMPCTWVMACAY 155
Query: 111 APHELGLCLACGSSDGNISVFTARAD 136
AP G +ACG D SV+ D
Sbjct: 156 APS--GCAIACGGLDNKCSVYPLTFD 179
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 135 (52.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 37/124 (29%), Positives = 64/124 (51%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH+ V+ + G+ +ATAS D S+++ T + LA L GH AV++ AW+
Sbjct: 387 GHQKVVNHASFSPDGRCIATASFDSSVRLWD--GKTGKFLATLRGHVAAVYQCAWSTDS- 443
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
+L S S D T+ +W + S + D H+ V ++DW+P G +A G +D +
Sbjct: 444 -RLLVSSSQDTTLKVW-DVRSKKMKFD--LPGHEDQVFAVDWSPD--GQRVASGGADKAV 497
Query: 129 SVFT 132
+++
Sbjct: 498 RIWS 501
Score = 114 (45.2 bits), Expect = 0.00085, P = 0.00085
Identities = 61/218 (27%), Positives = 92/218 (42%)
Query: 49 AKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSI 108
A ++GH G + ++ P S L + S D T +W + ++ I + H + V+ +
Sbjct: 128 ASMNGHDGTIISAQFS-PSTSSRLVTGSGDFTARLW-DCDTQTPIA--TMKGHTNWVSCV 183
Query: 109 DWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP-STAPGALV 167
WAP +A GS D I + + G + H + ++ W P AP
Sbjct: 184 AWAPD--ASIIATGSMDNTIRFWDPKK--GSPIGDALRRHTKPIMALCWQPLHLAPD--- 236
Query: 168 GSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST 227
SG P L SG DNTV++W N + F L HT + V W G ++
Sbjct: 237 -SG---PYL-LASGSKDNTVRIW---NVKLRTLLF-TLSGHTAPITCVRWG---G--QNW 282
Query: 228 IASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVS 265
I S+S D + IW D +GK LH K RV+
Sbjct: 283 IYSSSYDKTIRIW------DAKDGKCLHILKGHAARVN 314
Score = 111 (44.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 43/157 (27%), Positives = 64/157 (40%)
Query: 9 GHEDTVHDVAMD-YYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
GH+ T+ RL T S D++ ++ T +A + GH V VAWA P
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTP--IATMKGHTNWVSCVAWA-PD 188
Query: 68 FGSILASCSFDGTVIIW--KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELG-----LCLA 120
SI+A+ S D T+ W K+G+ I D H + ++ W P L LA
Sbjct: 189 -ASIIATGSMDNTIRFWDPKKGSP---IGD-ALRRHTKPIMALCWQPLHLAPDSGPYLLA 243
Query: 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSW 157
GS D + ++ + T H +T V W
Sbjct: 244 SGSKDNTVRIWNVKLRTLLFTL---SGHTAPITCVRW 277
Score = 71 (30.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 24/108 (22%), Positives = 48/108 (44%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ + D++V++W G + L+ H V AW+ + L + S+S+D +
Sbjct: 404 IATASFDSSVRLWDGKTGKF----LATLRGHVAAVYQCAWSTDSRL----LVSSSQDTTL 455
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW 285
+W V + +++ L + V+ V WS G +A + V +W
Sbjct: 456 KVWDVRSKKMKFD---LPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 63 (27.2 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 228 IASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
+ SAS+D ++I+W ++ + K +H + V S+S G +A A +++V LW+
Sbjct: 361 LVSASDDLQLILWD-PQKSTKPITK-MHGHQKVVNHASFSPDGRCIATASFDSSVRLWD 417
Score = 57 (25.1 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 228 IASASEDGKVIIWTVAREGDQWEGKVLHDFK---TPVYRVSWSLTGNILAVADGNNNVTL 284
IA+AS D V +W D GK L + VY+ +WS +L + + + +
Sbjct: 404 IATASFDSSVRLW------DGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKV 457
Query: 285 WE 286
W+
Sbjct: 458 WD 459
Score = 50 (22.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 176 QKLCSGGCDNTVKVW 190
Q++ SGG D V++W
Sbjct: 486 QRVASGGADKAVRIW 500
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/207 (26%), Positives = 93/207 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW------KEGNSNEWIKDHVFEDHKS 103
+L GH+ + ++W +P L S S D T+ +W KEG + K +F H +
Sbjct: 172 RLRGHQKEGYGLSW-NPNLSGNLLSASDDHTICLWDISAVPKEGKVVD-AKT-IFTGHTA 228
Query: 104 SVNSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161
V + W H L L GS D + ++ R++ S AH V +S+ P
Sbjct: 229 VVEDVSW--HLLHESLF-GSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY- 284
Query: 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL 221
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 285 -------SEFI-----LATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVQWSPH- 328
Query: 222 GLPKSTIASASEDGKVIIWTVAREGDQ 248
++ +AS+ D ++ +W +++ G++
Sbjct: 329 --NETILASSGTDRRLNVWDLSKIGEE 353
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/196 (25%), Positives = 86/196 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAW 63
I TGH V DV+ + L + + D + I NNTS+ + H V +++
Sbjct: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 282 -NPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETI-LASSG 337
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G + + P + + + A + +P + +CS
Sbjct: 338 TDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 393
Query: 182 GCDNTVKVWKLYNGIW 197
DN ++VW++ I+
Sbjct: 394 SEDNIMQVWQMAENIY 409
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 64/246 (26%), Positives = 101/246 (41%)
Query: 26 LATASSDYSI---KIIGVGNNTSQHLAK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D++I I V AK +GH V +V+W H S+ S + D
Sbjct: 193 LLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW-HLLHESLFGSVADDQK 251
Query: 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWD 140
++IW ++N H + H + VN + + P+ LA GS+D ++++ R +
Sbjct: 252 LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR-NLKLK 309
Query: 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWKM 199
+ +H + V W+P + + L S G D + VW L G +
Sbjct: 310 LHSFE-SHKDEIFQVQWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQS 355
Query: 200 -----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE--GDQ 248
D P L HT + D +W PN I S SED + +W +A D+
Sbjct: 356 PEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQVWQMAENIYNDE 412
Query: 249 -WEGKV 253
EG V
Sbjct: 413 DTEGSV 418
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/207 (26%), Positives = 93/207 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW------KEGNSNEWIKDHVFEDHKS 103
+L GH+ + ++W +P L S S D T+ +W KEG + K +F H +
Sbjct: 172 RLRGHQKEGYGLSW-NPNLSGHLLSASDDHTICLWDISAVPKEGKVVD-AKT-IFTGHTA 228
Query: 104 SVNSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161
V + W H L L GS D + ++ R++ S AH V +S+ P
Sbjct: 229 VVEDVSW--HLLHESLF-GSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY- 284
Query: 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL 221
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 285 -------SEFI-----LATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVQWSPH- 328
Query: 222 GLPKSTIASASEDGKVIIWTVAREGDQ 248
++ +AS+ D ++ +W +++ G++
Sbjct: 329 --NETILASSGTDRRLNVWDLSKIGEE 353
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/196 (25%), Positives = 86/196 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAW 63
I TGH V DV+ + L + + D + I NNTS+ + H V +++
Sbjct: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 282 -NPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETI-LASSG 337
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G + + P + + + A + +P + +CS
Sbjct: 338 TDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 393
Query: 182 GCDNTVKVWKLYNGIW 197
DN ++VW++ I+
Sbjct: 394 SEDNIMQVWQMAENIY 409
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 60/233 (25%), Positives = 96/233 (41%)
Query: 26 LATASSDYSI---KIIGVGNNTSQHLAK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D++I I V AK +GH V +V+W H S+ S + D
Sbjct: 193 LLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW-HLLHESLFGSVADDQK 251
Query: 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWD 140
++IW ++N H + H + VN + + P+ LA GS+D ++++ R +
Sbjct: 252 LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR-NLKLK 309
Query: 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWKM 199
+ +H + V W+P + + L S G D + VW L G +
Sbjct: 310 LHSFE-SHKDEIFQVQWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQS 355
Query: 200 -----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + +W +A
Sbjct: 356 PEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQVWQMA 405
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/207 (26%), Positives = 93/207 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW------KEGNSNEWIKDHVFEDHKS 103
+L GH+ + ++W +P L S S D T+ +W KEG + K +F H +
Sbjct: 172 RLRGHQKEGYGLSW-NPNLSGHLLSASDDHTICLWDISAVPKEGKVVD-AKT-IFTGHTA 228
Query: 104 SVNSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161
V + W H L L GS D + ++ R++ S AH V +S+ P
Sbjct: 229 VVEDVSW--HLLHESLF-GSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY- 284
Query: 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL 221
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 285 -------SEFI-----LATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVQWSPH- 328
Query: 222 GLPKSTIASASEDGKVIIWTVAREGDQ 248
++ +AS+ D ++ +W +++ G++
Sbjct: 329 --NETILASSGTDRRLNVWDLSKIGEE 353
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/196 (25%), Positives = 86/196 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAW 63
I TGH V DV+ + L + + D + I NNTS+ + H V +++
Sbjct: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 282 -NPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETI-LASSG 337
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G + + P + + + A + +P + +CS
Sbjct: 338 TDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 393
Query: 182 GCDNTVKVWKLYNGIW 197
DN ++VW++ I+
Sbjct: 394 SEDNIMQVWQMAENIY 409
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 60/233 (25%), Positives = 96/233 (41%)
Query: 26 LATASSDYSI---KIIGVGNNTSQHLAK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D++I I V AK +GH V +V+W H S+ S + D
Sbjct: 193 LLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW-HLLHESLFGSVADDQK 251
Query: 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWD 140
++IW ++N H + H + VN + + P+ LA GS+D ++++ R +
Sbjct: 252 LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR-NLKLK 309
Query: 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWKM 199
+ +H + V W+P + + L S G D + VW L G +
Sbjct: 310 LHSFE-SHKDEIFQVQWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQS 355
Query: 200 -----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + +W +A
Sbjct: 356 PEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQVWQMA 405
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/207 (26%), Positives = 93/207 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW------KEGNSNEWIKDHVFEDHKS 103
+L GH+ + ++W +P L S S D T+ +W KEG + K +F H +
Sbjct: 172 RLRGHQKEGYGLSW-NPNLSGHLLSASDDHTICLWDISAVPKEGKVVD-AKT-IFTGHTA 228
Query: 104 SVNSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161
V + W H L L GS D + ++ R++ S AH V +S+ P
Sbjct: 229 VVEDVSW--HLLHESLF-GSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY- 284
Query: 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL 221
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 285 -------SEFI-----LATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVQWSPH- 328
Query: 222 GLPKSTIASASEDGKVIIWTVAREGDQ 248
++ +AS+ D ++ +W +++ G++
Sbjct: 329 --NETILASSGTDRRLNVWDLSKIGEE 353
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/196 (25%), Positives = 86/196 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAW 63
I TGH V DV+ + L + + D + I NNTS+ + H V +++
Sbjct: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 282 -NPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETI-LASSG 337
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G + + P + + + A + +P + +CS
Sbjct: 338 TDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 393
Query: 182 GCDNTVKVWKLYNGIW 197
DN ++VW++ I+
Sbjct: 394 SEDNIMQVWQMAENIY 409
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 60/233 (25%), Positives = 96/233 (41%)
Query: 26 LATASSDYSI---KIIGVGNNTSQHLAK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D++I I V AK +GH V +V+W H S+ S + D
Sbjct: 193 LLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW-HLLHESLFGSVADDQK 251
Query: 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWD 140
++IW ++N H + H + VN + + P+ LA GS+D ++++ R +
Sbjct: 252 LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR-NLKLK 309
Query: 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWKM 199
+ +H + V W+P + + L S G D + VW L G +
Sbjct: 310 LHSFE-SHKDEIFQVQWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQS 355
Query: 200 -----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + +W +A
Sbjct: 356 PEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQVWQMA 405
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/207 (26%), Positives = 93/207 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW------KEGNSNEWIKDHVFEDHKS 103
+L GH+ + ++W +P L S S D T+ +W KEG + K +F H +
Sbjct: 172 RLRGHQKEGYGLSW-NPNLSGHLLSASDDHTICLWDISAVPKEGKVVD-AKT-IFTGHTA 228
Query: 104 SVNSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161
V + W H L L GS D + ++ R++ S AH V +S+ P
Sbjct: 229 VVEDVSW--HLLHESLF-GSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY- 284
Query: 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL 221
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 285 -------SEFI-----LATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVQWSPH- 328
Query: 222 GLPKSTIASASEDGKVIIWTVAREGDQ 248
++ +AS+ D ++ +W +++ G++
Sbjct: 329 --NETILASSGTDRRLNVWDLSKIGEE 353
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/196 (25%), Positives = 86/196 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAW 63
I TGH V DV+ + L + + D + I NNTS+ + H V +++
Sbjct: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 282 -NPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETI-LASSG 337
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G + + P + + + A + +P + +CS
Sbjct: 338 TDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 393
Query: 182 GCDNTVKVWKLYNGIW 197
DN ++VW++ I+
Sbjct: 394 SEDNIMQVWQMAENIY 409
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 60/233 (25%), Positives = 96/233 (41%)
Query: 26 LATASSDYSI---KIIGVGNNTSQHLAK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D++I I V AK +GH V +V+W H S+ S + D
Sbjct: 193 LLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW-HLLHESLFGSVADDQK 251
Query: 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWD 140
++IW ++N H + H + VN + + P+ LA GS+D ++++ R +
Sbjct: 252 LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR-NLKLK 309
Query: 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWKM 199
+ +H + V W+P + + L S G D + VW L G +
Sbjct: 310 LHSFE-SHKDEIFQVQWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQS 355
Query: 200 -----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + +W +A
Sbjct: 356 PEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQVWQMA 405
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/207 (26%), Positives = 93/207 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW------KEGNSNEWIKDHVFEDHKS 103
+L GH+ + ++W +P L S S D T+ +W KEG + K +F H +
Sbjct: 172 RLRGHQKEGYGLSW-NPNLSGNLLSASDDHTICLWDISAVPKEGKVVD-AKT-IFTGHTA 228
Query: 104 SVNSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161
V + W H L L GS D + ++ R++ S AH V +S+ P
Sbjct: 229 VVEDVSW--HLLHESLF-GSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY- 284
Query: 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL 221
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 285 -------SEFI-----LATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVQWSPH- 328
Query: 222 GLPKSTIASASEDGKVIIWTVAREGDQ 248
++ +AS+ D ++ +W +++ G++
Sbjct: 329 --NETILASSGTDRRLNVWDLSKIGEE 353
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/196 (25%), Positives = 86/196 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAW 63
I TGH V DV+ + L + + D + I NNTS+ + H V +++
Sbjct: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 282 -NPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETI-LASSG 337
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G + + P + + + A + +P + +CS
Sbjct: 338 TDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 393
Query: 182 GCDNTVKVWKLYNGIW 197
DN ++VW++ I+
Sbjct: 394 SEDNIMQVWQMAENIY 409
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 60/233 (25%), Positives = 96/233 (41%)
Query: 26 LATASSDYSI---KIIGVGNNTSQHLAK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D++I I V AK +GH V +V+W H S+ S + D
Sbjct: 193 LLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW-HLLHESLFGSVADDQK 251
Query: 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWD 140
++IW ++N H + H + VN + + P+ LA GS+D ++++ R +
Sbjct: 252 LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR-NLKLK 309
Query: 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWKM 199
+ +H + V W+P + + L S G D + VW L G +
Sbjct: 310 LHSFE-SHKDEIFQVQWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQS 355
Query: 200 -----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + +W +A
Sbjct: 356 PEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQVWQMA 405
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/207 (26%), Positives = 93/207 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW------KEGNSNEWIKDHVFEDHKS 103
+L GH+ + ++W +P L S S D T+ +W KEG + K +F H +
Sbjct: 172 RLRGHQKEGYGLSW-NPNLSGNLLSASDDHTICLWDISAVPKEGKVVD-AKT-IFTGHTA 228
Query: 104 SVNSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161
V + W H L L GS D + ++ R++ S AH V +S+ P
Sbjct: 229 VVEDVSW--HLLHESLF-GSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY- 284
Query: 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL 221
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 285 -------SEFI-----LATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVQWSPH- 328
Query: 222 GLPKSTIASASEDGKVIIWTVAREGDQ 248
++ +AS+ D ++ +W +++ G++
Sbjct: 329 --NETILASSGTDRRLNVWDLSKIGEE 353
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/196 (25%), Positives = 86/196 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAW 63
I TGH V DV+ + L + + D + I NNTS+ + H V +++
Sbjct: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 282 -NPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETI-LASSG 337
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G + + P + + + A + +P + +CS
Sbjct: 338 TDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 393
Query: 182 GCDNTVKVWKLYNGIW 197
DN ++VW++ I+
Sbjct: 394 SEDNIMQVWQMAENIY 409
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 60/233 (25%), Positives = 96/233 (41%)
Query: 26 LATASSDYSI---KIIGVGNNTSQHLAK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D++I I V AK +GH V +V+W H S+ S + D
Sbjct: 193 LLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW-HLLHESLFGSVADDQK 251
Query: 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWD 140
++IW ++N H + H + VN + + P+ LA GS+D ++++ R +
Sbjct: 252 LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR-NLKLK 309
Query: 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWKM 199
+ +H + V W+P + + L S G D + VW L G +
Sbjct: 310 LHSFE-SHKDEIFQVQWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQS 355
Query: 200 -----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + +W +A
Sbjct: 356 PEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQVWQMA 405
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/207 (26%), Positives = 93/207 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW------KEGNSNEWIKDHVFEDHKS 103
+L GH+ + ++W +P L S S D T+ +W KEG + K +F H +
Sbjct: 172 RLRGHQKEGYGLSW-NPNLSGHLLSASDDHTICLWDISAVPKEGKVVD-AKT-IFTGHTA 228
Query: 104 SVNSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161
V + W H L L GS D + ++ R++ S AH V +S+ P
Sbjct: 229 VVEDVSW--HLLHESLF-GSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY- 284
Query: 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL 221
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 285 -------SEFI-----LATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVQWSPH- 328
Query: 222 GLPKSTIASASEDGKVIIWTVAREGDQ 248
++ +AS+ D ++ +W +++ G++
Sbjct: 329 --NETILASSGTDRRLNVWDLSKIGEE 353
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/196 (25%), Positives = 86/196 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAW 63
I TGH V DV+ + L + + D + I NNTS+ + H V +++
Sbjct: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 282 -NPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETI-LASSG 337
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G + + P + + + A + +P + +CS
Sbjct: 338 TDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 393
Query: 182 GCDNTVKVWKLYNGIW 197
DN ++VW++ I+
Sbjct: 394 SEDNIMQVWQMAENIY 409
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 60/233 (25%), Positives = 96/233 (41%)
Query: 26 LATASSDYSI---KIIGVGNNTSQHLAK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D++I I V AK +GH V +V+W H S+ S + D
Sbjct: 193 LLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW-HLLHESLFGSVADDQK 251
Query: 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWD 140
++IW ++N H + H + VN + + P+ LA GS+D ++++ R +
Sbjct: 252 LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR-NLKLK 309
Query: 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWKM 199
+ +H + V W+P + + L S G D + VW L G +
Sbjct: 310 LHSFE-SHKDEIFQVQWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQS 355
Query: 200 -----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + +W +A
Sbjct: 356 PEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQVWQMA 405
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/207 (26%), Positives = 93/207 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW------KEGNSNEWIKDHVFEDHKS 103
+L GH+ + ++W +P L S S D T+ +W KEG + K +F H +
Sbjct: 172 RLRGHQKEGYGLSW-NPNLSGHLLSASDDHTICLWDISAVPKEGKVVD-AKT-IFTGHTA 228
Query: 104 SVNSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161
V + W H L L GS D + ++ R++ S AH V +S+ P
Sbjct: 229 VVEDVSW--HLLHESLF-GSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY- 284
Query: 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL 221
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 285 -------SEFI-----LATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVQWSPH- 328
Query: 222 GLPKSTIASASEDGKVIIWTVAREGDQ 248
++ +AS+ D ++ +W +++ G++
Sbjct: 329 --NETILASSGTDRRLNVWDLSKIGEE 353
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/196 (25%), Positives = 86/196 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAW 63
I TGH V DV+ + L + + D + I NNTS+ + H V +++
Sbjct: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 282 -NPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETI-LASSG 337
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G + + P + + + A + +P + +CS
Sbjct: 338 TDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 393
Query: 182 GCDNTVKVWKLYNGIW 197
DN ++VW++ I+
Sbjct: 394 SEDNIMQVWQMAENIY 409
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 60/233 (25%), Positives = 96/233 (41%)
Query: 26 LATASSDYSI---KIIGVGNNTSQHLAK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D++I I V AK +GH V +V+W H S+ S + D
Sbjct: 193 LLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW-HLLHESLFGSVADDQK 251
Query: 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWD 140
++IW ++N H + H + VN + + P+ LA GS+D ++++ R +
Sbjct: 252 LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR-NLKLK 309
Query: 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWKM 199
+ +H + V W+P + + L S G D + VW L G +
Sbjct: 310 LHSFE-SHKDEIFQVQWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQS 355
Query: 200 -----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + +W +A
Sbjct: 356 PEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQVWQMA 405
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/207 (26%), Positives = 93/207 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW------KEGNSNEWIKDHVFEDHKS 103
+L GH+ + ++W +P L S S D T+ +W KEG + K +F H +
Sbjct: 172 RLRGHQKEGYGLSW-NPNLSGHLLSASDDHTICLWDISAVPKEGKVVD-AKT-IFTGHTA 228
Query: 104 SVNSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161
V + W H L L GS D + ++ R++ S AH V +S+ P
Sbjct: 229 VVEDVSW--HLLHESLF-GSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY- 284
Query: 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL 221
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 285 -------SEFI-----LATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVQWSPH- 328
Query: 222 GLPKSTIASASEDGKVIIWTVAREGDQ 248
++ +AS+ D ++ +W +++ G++
Sbjct: 329 --NETILASSGTDRRLNVWDLSKIGEE 353
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 50/196 (25%), Positives = 86/196 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAW 63
I TGH V DV+ + L + + D + I NNTS+ + H V +++
Sbjct: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 282 -NPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETI-LASSG 337
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G + + P + + + A + +P + +CS
Sbjct: 338 TDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 393
Query: 182 GCDNTVKVWKLYNGIW 197
DN ++VW++ I+
Sbjct: 394 SEDNIMQVWQMAENIY 409
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 60/233 (25%), Positives = 96/233 (41%)
Query: 26 LATASSDYSI---KIIGVGNNTSQHLAK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D++I I V AK +GH V +V+W H S+ S + D
Sbjct: 193 LLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW-HLLHESLFGSVADDQK 251
Query: 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWD 140
++IW ++N H + H + VN + + P+ LA GS+D ++++ R +
Sbjct: 252 LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR-NLKLK 309
Query: 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWKM 199
+ +H + V W+P + + L S G D + VW L G +
Sbjct: 310 LHSFE-SHKDEIFQVQWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQS 355
Query: 200 -----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + +W +A
Sbjct: 356 PEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQVWQMA 405
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/207 (26%), Positives = 93/207 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW------KEGNSNEWIKDHVFEDHKS 103
+L GH+ + ++W +P L S S D T+ +W KEG + K +F H +
Sbjct: 172 RLRGHQKEGYGLSW-NPNLSGHLLSASDDHTICLWDISAVPKEGKVVD-AKT-IFTGHTA 228
Query: 104 SVNSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161
V + W H L L GS D + ++ R++ S AH V +S+ P
Sbjct: 229 VVEDVSW--HLLHESLF-GSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY- 284
Query: 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNL 221
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 285 -------SEFI-----LATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVQWSPH- 328
Query: 222 GLPKSTIASASEDGKVIIWTVAREGDQ 248
++ +AS+ D ++ +W +++ G++
Sbjct: 329 --NETILASSGTDRRLNVWDLSKIGEE 353
Score = 134 (52.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 50/195 (25%), Positives = 85/195 (43%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGV-GNNTSQHLAKLSGHKGAVWEVAW 63
I TGH V DV+ + L + + D + I NNTS+ + H V +++
Sbjct: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 282 -NPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETI-LASSG 337
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G + + P + + + A + +P + +CS
Sbjct: 338 TDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 393
Query: 182 GCDNTVKVWKLYNGI 196
DN ++VW++ I
Sbjct: 394 SEDNIMQVWQMAENI 408
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 60/233 (25%), Positives = 96/233 (41%)
Query: 26 LATASSDYSI---KIIGVGNNTSQHLAK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D++I I V AK +GH V +V+W H S+ S + D
Sbjct: 193 LLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW-HLLHESLFGSVADDQK 251
Query: 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWD 140
++IW ++N H + H + VN + + P+ LA GS+D ++++ R +
Sbjct: 252 LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR-NLKLK 309
Query: 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWKM 199
+ +H + V W+P + + L S G D + VW L G +
Sbjct: 310 LHSFE-SHKDEIFQVQWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQS 355
Query: 200 -----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + +W +A
Sbjct: 356 PEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQVWQMA 405
>DICTYBASE|DDB_G0285601 [details] [associations]
symbol:cdc20 "cdc20/fizzy domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143
dictyBase:DDB_G0285601 GO:GO:0005634 GO:GO:0045335 GO:GO:0051301
GO:GO:0007067 GenomeReviews:CM000153_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000079 eggNOG:COG2319 GO:GO:0016567 RefSeq:XP_638150.1
ProteinModelPortal:Q54MZ3 STRING:Q54MZ3 EnsemblProtists:DDB0237885
GeneID:8625198 KEGG:ddi:DDB_G0285601 KO:K03363 OMA:DAGTYSI
ProtClustDB:CLSZ2430186 Uniprot:Q54MZ3
Length = 499
Score = 133 (51.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 54/185 (29%), Positives = 81/185 (43%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH V +A + Y L++ SSD +I V + H++ LSGH V + W+H
Sbjct: 263 GHAGRVGALAWNDY--ILSSGSSDTNIFNHDV-RVQNHHVSTLSGHSQEVCGLKWSHD-- 317
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
G LAS D + IW + N H FE H ++V ++ W P + L LA G +
Sbjct: 318 GGQLASGGNDNIINIWDINSENFETPAHTFEQHTAAVRALAWCPFQPNL-LATGGGAADR 376
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS-GFLDPVQKLCSGGCDNTV 187
++ G + +D V S+ W ST LV S G+ +LC + V
Sbjct: 377 TIRFWNTITGVCLNTVDTMSQV--CSIQW--STTYRELVSSHGYSQ--NQLCVWKYPSMV 430
Query: 188 KVWKL 192
K +L
Sbjct: 431 KCAEL 435
Score = 46 (21.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 21/62 (33%), Positives = 27/62 (43%)
Query: 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240
G N + VWK Y + K C L HT A +P+ G T+ SAS D + W
Sbjct: 415 GYSQNQLCVWK-YPSMVK--C-AELTGHTSRALHTAISPD-G---ETVVSASADETLRFW 466
Query: 241 TV 242
V
Sbjct: 467 RV 468
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/182 (26%), Positives = 77/182 (42%)
Query: 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVA 62
P K GH + V+ + D G LA+ S D ++KI + + H L H+ ++ +
Sbjct: 347 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVH--NLQAHRKEIYTIK 404
Query: 63 WA-------HPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHEL 115
W+ +P +LAS SFD TV +W + + + H H+ V S+ ++P
Sbjct: 405 WSPTGPTTSNPNSSIMLASASFDSTVRLW---DMEQGVCTHTLRKHQEPVYSVAFSPD-- 459
Query: 116 GLCLACGSSDGNISVFTARADGGWDTSRIDQAHPV----GVTSVSWAPSTAPGALVGSGF 171
G LA GS D + + W+T H G+ V W A G VG+
Sbjct: 460 GKYLASGSFDKCVHI--------WNTQSGSLVHSYQGTGGIFEVCW---NAQGDKVGASA 508
Query: 172 LD 173
D
Sbjct: 509 SD 510
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 129 (50.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 64/288 (22%), Positives = 114/288 (39%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHP-KF 68
H+D + A++ + + T S D + +I + + + + GH V +VAW
Sbjct: 100 HDDWIS--AIEGTEEWILTGSYDKTSRIWSLEGKS---IMTIVGHTDVVKDVAWVKKDSL 154
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKD-HVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
+L S S D T+++W+ +K H H SV+SI A G GS D
Sbjct: 155 SCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSI--AVDSTGTKFCSGSWDKM 212
Query: 128 ISVFTARADGGWD-----TSRI---DQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLC 179
+ +++ D T+R + +G+T + + S +++C
Sbjct: 213 LKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWSDAEEIC 272
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
S D+T+KVW + +G K + ++++P L K +AS S D + +
Sbjct: 273 SASWDHTIKVWDVESGSLKSTLTGNKVFNC-----ISYSP---LCKR-LASGSTDRHIRL 323
Query: 240 WTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADG-NNNVTLWE 286
W + L V V WS T ++ +N V LW+
Sbjct: 324 WDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVKLWD 371
Score = 128 (50.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 53/176 (30%), Positives = 78/176 (44%)
Query: 44 TSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKS 103
T + LSGHK A+ V W+ + + S S+D T+ +W + + +K +K
Sbjct: 246 TRTPIVTLSGHKEAISSVLWSDAEE---ICSASWDHTIKVWDVESGS--LKS-TLTGNKV 299
Query: 104 SVNSIDWAPHELGLC--LACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161
N I ++P LC LA GS+D +I ++ R G S +H VTSV W+P+
Sbjct: 300 -FNCISYSP----LCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTH 354
Query: 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAW 217
Q+L SG DN VK+W + K + L H D V V W
Sbjct: 355 E-------------QQLISGSLDNMVKLWDTRS--CKAPLYD-LAAHEDKVLSVDW 394
Score = 49 (22.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKI 37
GH +V +A+D G + + S D +KI
Sbjct: 187 GHAGSVDSIAVDSTGTKFCSGSWDKMLKI 215
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 39/142 (27%), Positives = 65/142 (45%)
Query: 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVA 62
P K GH + V+ + D G LA+ S D ++KI + ++ H L H ++ +
Sbjct: 341 PIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVH--DLQAHNKEIYTIK 398
Query: 63 WA-------HPKFGSILAS---CSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP 112
W+ +P +LAS SFD TV +W + + I H H+ V S+ ++P
Sbjct: 399 WSPTGPGTNNPNANLMLASLDSASFDSTVRLW---DVDRGICIHTLTKHQEPVYSVAFSP 455
Query: 113 HELGLCLACGSSDGNISVFTAR 134
G LA GS D + ++ +
Sbjct: 456 D--GRYLASGSFDKCVHIWNTQ 475
Score = 107 (42.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 55/197 (27%), Positives = 78/197 (39%)
Query: 98 FEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSW 157
F H + +DW + A S+D I V D T Q H V ++ W
Sbjct: 304 FPFHSAPALDVDWQSNNT---FASCSTDMCIHVCKLGQDRPIKTF---QGHTNEVNAIKW 357
Query: 158 APSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMD-CFPALQMHTDWVRDVA 216
P+ G L+ S CS D T+K+W + K D C LQ H + +
Sbjct: 358 DPT---GNLLAS---------CSD--DMTLKIWSM-----KQDSCVHDLQAHNKEIYTIK 398
Query: 217 WAP--------NLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSL 268
W+P N L +++ SAS D V +W V R G H + PVY V++S
Sbjct: 399 WSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDR-GICIHTLTKH--QEPVYSVAFSP 455
Query: 269 TGNILAVADGNNNVTLW 285
G LA + V +W
Sbjct: 456 DGRYLASGSFDKCVHIW 472
Score = 90 (36.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 30/108 (27%), Positives = 42/108 (38%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ S G D T +W + G K FP H+ DV W N +T AS S D +
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQQ-FP---FHSAPALDVDWQSN-----NTFASCSTDMCI 331
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW 285
V + G K V + W TGN+LA + + +W
Sbjct: 332 ---HVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Score = 75 (31.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 32/111 (28%), Positives = 49/111 (44%)
Query: 1 MPPQK--IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVG-NNTS-------QHLAK 50
+PP K + GHE V A + LA+ S D + +I + N+TS +H +
Sbjct: 157 IPPNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIR 216
Query: 51 LSGH----KGAVWEVAWAHPKFGSILASCSFDGTVIIW-KEGNSNEWIKDH 96
G V + W G++LA+ S+DG IW K+GN + H
Sbjct: 217 EGGQDVPSNKDVTSLDWNSE--GTLLATGSYDGFARIWTKDGNLASTLGQH 265
>UNIPROTKB|O14775 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0007165
"signal transduction" evidence=NAS] [GO:0005834 "heterotrimeric
G-protein complex" evidence=NAS] [GO:0006184 "GTP catabolic
process" evidence=NAS] Reactome:REACT_13685 Reactome:REACT_604
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005634
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
Pathway_Interaction_DB:txa2pathway
Pathway_Interaction_DB:cone_pathway
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
GO:GO:0005834 HOGENOM:HOG000176356 HOVERGEN:HBG000188
InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE
EMBL:AF017656 EMBL:AL117471 EMBL:AF501885 EMBL:AF300650
EMBL:BC013997 IPI:IPI00151607 IPI:IPI00745232 IPI:IPI00967497
PIR:T17256 RefSeq:NP_006569.1 RefSeq:NP_057278.2 UniGene:Hs.155090
ProteinModelPortal:O14775 SMR:O14775 IntAct:O14775
MINT:MINT-1399610 STRING:O14775 PhosphoSite:O14775 PaxDb:O14775
PRIDE:O14775 DNASU:10681 Ensembl:ENST00000261837
Ensembl:ENST00000358784 Ensembl:ENST00000396335 GeneID:10681
KEGG:hsa:10681 UCSC:uc002abr.1 UCSC:uc002abs.1 CTD:10681
GeneCards:GC15M052413 HGNC:HGNC:4401 HPA:CAB032353 HPA:HPA041942
MIM:604447 neXtProt:NX_O14775 PharmGKB:PA28780 InParanoid:O14775
OrthoDB:EOG4XWFXZ PhylomeDB:O14775 ChiTaRS:GNB5 GenomeRNAi:10681
NextBio:40605 ArrayExpress:O14775 Bgee:O14775 CleanEx:HS_GNB5
Genevestigator:O14775 GermOnline:ENSG00000069966 Uniprot:O14775
Length = 395
Score = 95 (38.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 40/178 (22%), Positives = 77/178 (43%)
Query: 120 ACGSSDGNISVFTARADGG---WD--TSRIDQA---HPVGVTSVSWAPSTAPGALVGSGF 171
AC ++ ++ + TA DG WD + ++ Q+ H V + APS G+ F
Sbjct: 200 ACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSET-----GNTF 254
Query: 172 LDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA 231
+ SGGCD VW + +G C A + H + V + P+ G AS
Sbjct: 255 V-------SGGCDKKAMVWDMRSG----QCVQAFETHESDINSVRYYPS-G---DAFASG 299
Query: 232 SEDGKVIIWTVAREGDQWEGKVLHDFKTPVY---RVSWSLTGNILAVADGNNNVTLWE 286
S+D ++ + + + ++ ++ ++ V +SL+G +L + + +W+
Sbjct: 300 SDDATCRLYDLRADREV----AIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 353
Score = 85 (35.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 27/86 (31%), Positives = 37/86 (43%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDW 110
L GH V + W K + S S DG VI+W +N K+H + V + +
Sbjct: 101 LKGHGNKVLCMDWCKDK--RRIVSSSQDGKVIVWDSFTTN---KEHAVTMPCTWVMACAY 155
Query: 111 APHELGLCLACGSSDGNISVFTARAD 136
AP G +ACG D SV+ D
Sbjct: 156 APS--GCAIACGGLDNKCSVYPLTFD 179
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 84/310 (27%), Positives = 136/310 (43%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH+ + + + GK+LATAS D + + + + + GHK V V ++ P
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAY--RYVGHKDVVTSVQFS-PH- 71
Query: 69 GSILASCSFDGTVIIW---KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125
G++LAS S D TV +W K G +E F+ H + V S+D++ G LA S D
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSE------FKAHTAPVRSVDFSAD--GQFLATASED 123
Query: 126 GNISV---------FTARADGGWDTSRIDQAHPVG--VTSVS-------WAPSTAP---- 163
+I V ++ W R + P G + S S W +
Sbjct: 124 KSIKVWSMYRQRFLYSLYRHTHW--VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN 181
Query: 164 -GALVG-SGFLD--PVQK-LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWA 218
VG + F+D P + S G D TVKVW + + K+ Q+H+ V +++
Sbjct: 182 FSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR--VNKL--LQHYQVHSGGVNCISFH 237
Query: 219 PNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKT---PVYRVSWSLTGNILAV 275
P+ G + + +AS DG + I D EG++++ + PV+ VS+S G + A
Sbjct: 238 PS-G---NYLITASSDGTLKIL------DLLEGRLIYTLQGHTGPVFTVSFSKGGELFAS 287
Query: 276 ADGNNNVTLW 285
+ V LW
Sbjct: 288 GGADTQVLLW 297
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 109 (43.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 29/107 (27%), Positives = 56/107 (52%)
Query: 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWA 64
K+ TGH +V + + Y + + T SSD ++++ V NT + L L H AV
Sbjct: 225 KVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV-----L 275
Query: 65 HPKFGS-ILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDW 110
H +F + ++ +CS D ++ +W ++ + V H+++VN +D+
Sbjct: 276 HLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 322
Score = 72 (30.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
SG DNT+++W + G C L+ H + VR + + I S + DGK+ +
Sbjct: 369 SGSSDNTIRLWDIECGA----CLRVLEGHEELVRCIRF------DNKRIVSGAYDGKIKV 418
Query: 240 W 240
W
Sbjct: 419 W 419
Score = 54 (24.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG 235
+++ SG D +KVW L + L + T V L + I S+S D
Sbjct: 405 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT-LVEHSGRVFRLQFDEFQIISSSHDD 463
Query: 236 KVIIW 240
++IW
Sbjct: 464 TILIW 468
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 113 (44.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 49/182 (26%), Positives = 86/182 (47%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH V V G+ LA++S+D IKI G + + +SGHK + +VAW+
Sbjct: 17 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT--ISGHKLGISDVAWSSDS- 73
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
++L S S D T+ IW + +S + +K + H + V ++ P L ++ GS D ++
Sbjct: 74 -NLLVSASDDKTLKIW-DVSSGKCLK--TLKGHSNYVFCCNFNPQS-NLIVS-GSFDESV 127
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL---CSGGCDN 185
++ + T AH V++V + G+L+ S D + ++ SG C
Sbjct: 128 RIWDVKTGKCLKTL---PAHSDPVSAVHF---NRDGSLIVSSSYDGLCRIWDTASGQCLK 181
Query: 186 TV 187
T+
Sbjct: 182 TL 183
Score = 102 (41.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 46/175 (26%), Positives = 84/175 (48%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAW 63
+K +GH+ + DVA L +AS D ++KI V ++ + L L GH V+ +
Sbjct: 54 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV--SSGKCLKTLKGHSNYVFCCNF 111
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P+ +++ S SFD +V IW + + + +K H V+++ + + G + S
Sbjct: 112 -NPQ-SNLIVSGSFDESVRIW-DVKTGKCLK--TLPAHSDPVSAVHF--NRDGSLIVSSS 164
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
DG ++ A G + ID +P V+ V ++P+ G + + LD KL
Sbjct: 165 YDGLCRIWDT-ASGQCLKTLIDDDNPP-VSFVKFSPN---GKYILAATLDNTLKL 214
Score = 99 (39.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 32/109 (29%), Positives = 47/109 (43%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ SG D +V++W + G C L H+D V V + S I S+S DG
Sbjct: 118 IVSGSFDESVRIWDVKTG----KCLKTLPAHSDPVSAV----HFNRDGSLIVSSSYDGLC 169
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
IW A Q ++ D PV V +S G + A +N + LW+
Sbjct: 170 RIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 216
Score = 72 (30.4 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 101 HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
H +V+S+ ++P+ G LA S+D I ++ A DG ++ + H +G++ V+W S
Sbjct: 18 HTKAVSSVKFSPN--GEWLASSSADKLIKIWGAY-DGKFE--KTISGHKLGISDVAW--S 70
Query: 161 TAPGALVGSGFLDPVQKL---CSGGCDNTVK 188
+ LV + D K+ SG C T+K
Sbjct: 71 SDSNLLVSASD-DKTLKIWDVSSGKCLKTLK 100
Score = 61 (26.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 23/65 (35%), Positives = 31/65 (47%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASAS-EDGK 236
+ SG DN V +W L + LQ HTD V A P ++ IASA+ E+ K
Sbjct: 248 IVSGSEDNLVYIWNLQT----KEIVQKLQGHTDVVISTACHPT----ENIIASAALENDK 299
Query: 237 VI-IW 240
I +W
Sbjct: 300 TIKLW 304
Score = 53 (23.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 28/106 (26%), Positives = 43/106 (40%)
Query: 184 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST-IASASEDGKVIIWTV 242
DNT+K+W G C H + + +A N + I S SED V IW +
Sbjct: 209 DNTLKLWDYSKG----KCLKTYTGHKN-EKYCIFA-NFSVTGGKWIVSGSEDNLVYIWNL 262
Query: 243 AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVA--DGNNNVTLWE 286
+ + K L V + T NI+A A + + + LW+
Sbjct: 263 QTK--EIVQK-LQGHTDVVISTACHPTENIIASAALENDKTIKLWK 305
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW--KEGNSNEWIKDH--VFEDHKSSV 105
+L GH+ + ++W G +L S S D TV +W G I D +F H + V
Sbjct: 162 RLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 220
Query: 106 NSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163
+ W H L L GS D + ++ R++ S + AH V +S+ P
Sbjct: 221 EDVAW--HLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPY--- 274
Query: 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGL 223
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 275 -----SEFI-----LATGSADKTVALWDLRNLKLKLHTF---ESHKDEIFQVHWSPH--- 318
Query: 224 PKSTIASASEDGKVIIWTVAREGDQWEGKVLHD 256
++ +AS+ D ++ +W +++ G++ + D
Sbjct: 319 NETILASSGTDRRLNVWDLSKIGEEQSAEDAED 351
Score = 136 (52.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 49/196 (25%), Positives = 87/196 (44%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGVGNNTSQHLAKL-SGHKGAVWEVAW 63
I TGH V DVA + L + + D + I +NT+ + L H V +++
Sbjct: 212 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSF 271
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 272 -NPYSEFILATGSADKTVALWDLRNLK--LKLHTFESHKDEIFQVHWSPHNETI-LASSG 327
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G ++ + P + + + A + +P + +CS
Sbjct: 328 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 383
Query: 182 GCDNTVKVWKLYNGIW 197
DN +++W++ I+
Sbjct: 384 SEDNIMQIWQMAENIY 399
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 63/234 (26%), Positives = 100/234 (42%)
Query: 26 LATASSDYSIKI--IGVGNNTSQHL-AK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D+++ + I G + + AK +GH V +VAW H S+ S + D
Sbjct: 183 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW-HLLHESLFGSVADDQK 241
Query: 81 VIIWKEGNSNEWIK-DHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGW 139
++IW + SN K H+ + H + VN + + P+ LA GS+D ++++ R
Sbjct: 242 LMIW-DTRSNTTSKPSHLVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR--NLK 297
Query: 140 DTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWK 198
++H + V W+P + + L S G D + VW L G +
Sbjct: 298 LKLHTFESHKDEIFQVHWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQ 344
Query: 199 M-----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + IW +A
Sbjct: 345 SAEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQIWQMA 395
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW--KEGNSNEWIKDH--VFEDHKSSV 105
+L GH+ + ++W G +L S S D TV +W G I D +F H + V
Sbjct: 162 RLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 220
Query: 106 NSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163
+ W H L L GS D + ++ R++ S + AH V +S+ P
Sbjct: 221 EDVAW--HLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPY--- 274
Query: 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGL 223
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 275 -----SEFI-----LATGSADKTVALWDLRNLKLKLHTF---ESHKDEIFQVHWSPH--- 318
Query: 224 PKSTIASASEDGKVIIWTVAREGDQWEGKVLHD 256
++ +AS+ D ++ +W +++ G++ + D
Sbjct: 319 NETILASSGTDRRLNVWDLSKIGEEQSAEDAED 351
Score = 136 (52.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 49/196 (25%), Positives = 87/196 (44%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGVGNNTSQHLAKL-SGHKGAVWEVAW 63
I TGH V DVA + L + + D + I +NT+ + L H V +++
Sbjct: 212 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSF 271
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 272 -NPYSEFILATGSADKTVALWDLRNLK--LKLHTFESHKDEIFQVHWSPHNETI-LASSG 327
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G ++ + P + + + A + +P + +CS
Sbjct: 328 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 383
Query: 182 GCDNTVKVWKLYNGIW 197
DN +++W++ I+
Sbjct: 384 SEDNIMQIWQMAENIY 399
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 63/234 (26%), Positives = 100/234 (42%)
Query: 26 LATASSDYSIKI--IGVGNNTSQHL-AK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D+++ + I G + + AK +GH V +VAW H S+ S + D
Sbjct: 183 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW-HLLHESLFGSVADDQK 241
Query: 81 VIIWKEGNSNEWIK-DHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGW 139
++IW + SN K H+ + H + VN + + P+ LA GS+D ++++ R
Sbjct: 242 LMIW-DTRSNTTSKPSHLVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR--NLK 297
Query: 140 DTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWK 198
++H + V W+P + + L S G D + VW L G +
Sbjct: 298 LKLHTFESHKDEIFQVHWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQ 344
Query: 199 M-----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + IW +A
Sbjct: 345 SAEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQIWQMA 395
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW--KEGNSNEWIKDH--VFEDHKSSV 105
+L GH+ + ++W G +L S S D TV +W G I D +F H + V
Sbjct: 171 RLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 229
Query: 106 NSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163
+ W H L L GS D + ++ R++ S + AH V +S+ P
Sbjct: 230 EDVAW--HLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPY--- 283
Query: 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGL 223
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 284 -----SEFI-----LATGSADKTVALWDLRNLKLKLHTF---ESHKDEIFQVHWSPH--- 327
Query: 224 PKSTIASASEDGKVIIWTVAREGDQWEGKVLHD 256
++ +AS+ D ++ +W +++ G++ + D
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 49/196 (25%), Positives = 87/196 (44%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGVGNNTSQHLAKL-SGHKGAVWEVAW 63
I TGH V DVA + L + + D + I +NT+ + L H V +++
Sbjct: 221 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSF 280
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 281 -NPYSEFILATGSADKTVALWDLRNLK--LKLHTFESHKDEIFQVHWSPHNETI-LASSG 336
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G ++ + P + + + A + +P + +CS
Sbjct: 337 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 392
Query: 182 GCDNTVKVWKLYNGIW 197
DN +++W++ I+
Sbjct: 393 SEDNIMQIWQMAENIY 408
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 63/234 (26%), Positives = 100/234 (42%)
Query: 26 LATASSDYSIKI--IGVGNNTSQHL-AK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D+++ + I G + + AK +GH V +VAW H S+ S + D
Sbjct: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW-HLLHESLFGSVADDQK 250
Query: 81 VIIWKEGNSNEWIK-DHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGW 139
++IW + SN K H+ + H + VN + + P+ LA GS+D ++++ R
Sbjct: 251 LMIW-DTRSNTTSKPSHLVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR--NLK 306
Query: 140 DTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWK 198
++H + V W+P + + L S G D + VW L G +
Sbjct: 307 LKLHTFESHKDEIFQVHWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQ 353
Query: 199 M-----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + IW +A
Sbjct: 354 SAEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQIWQMA 404
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW--KEGNSNEWIKDH--VFEDHKSSV 105
+L GH+ + ++W G +L S S D TV +W G I D +F H + V
Sbjct: 171 RLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 229
Query: 106 NSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163
+ W H L L GS D + ++ R++ S + AH V +S+ P
Sbjct: 230 EDVAW--HLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPY--- 283
Query: 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGL 223
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 284 -----SEFI-----LATGSADKTVALWDLRNLKLKLHTF---ESHKDEIFQVHWSPH--- 327
Query: 224 PKSTIASASEDGKVIIWTVAREGDQWEGKVLHD 256
++ +AS+ D ++ +W +++ G++ + D
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 49/196 (25%), Positives = 87/196 (44%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGVGNNTSQHLAKL-SGHKGAVWEVAW 63
I TGH V DVA + L + + D + I +NT+ + L H V +++
Sbjct: 221 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSF 280
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 281 -NPYSEFILATGSADKTVALWDLRNLK--LKLHTFESHKDEIFQVHWSPHNETI-LASSG 336
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G ++ + P + + + A + +P + +CS
Sbjct: 337 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 392
Query: 182 GCDNTVKVWKLYNGIW 197
DN +++W++ I+
Sbjct: 393 SEDNIMQIWQMAENIY 408
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 63/234 (26%), Positives = 100/234 (42%)
Query: 26 LATASSDYSIKI--IGVGNNTSQHL-AK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D+++ + I G + + AK +GH V +VAW H S+ S + D
Sbjct: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW-HLLHESLFGSVADDQK 250
Query: 81 VIIWKEGNSNEWIK-DHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGW 139
++IW + SN K H+ + H + VN + + P+ LA GS+D ++++ R
Sbjct: 251 LMIW-DTRSNTTSKPSHLVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR--NLK 306
Query: 140 DTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWK 198
++H + V W+P + + L S G D + VW L G +
Sbjct: 307 LKLHTFESHKDEIFQVHWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQ 353
Query: 199 M-----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + IW +A
Sbjct: 354 SAEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQIWQMA 404
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW--KEGNSNEWIKDH--VFEDHKSSV 105
+L GH+ + ++W G +L S S D TV +W G I D +F H + V
Sbjct: 171 RLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 229
Query: 106 NSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163
+ W H L L GS D + ++ R++ S + AH V +S+ P
Sbjct: 230 EDVAW--HLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPY--- 283
Query: 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGL 223
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 284 -----SEFI-----LATGSADKTVALWDLRNLKLKLHTF---ESHKDEIFQVHWSPH--- 327
Query: 224 PKSTIASASEDGKVIIWTVAREGDQWEGKVLHD 256
++ +AS+ D ++ +W +++ G++ + D
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 49/196 (25%), Positives = 87/196 (44%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGVGNNTSQHLAKL-SGHKGAVWEVAW 63
I TGH V DVA + L + + D + I +NT+ + L H V +++
Sbjct: 221 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSF 280
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 281 -NPYSEFILATGSADKTVALWDLRNLK--LKLHTFESHKDEIFQVHWSPHNETI-LASSG 336
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G ++ + P + + + A + +P + +CS
Sbjct: 337 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 392
Query: 182 GCDNTVKVWKLYNGIW 197
DN +++W++ I+
Sbjct: 393 SEDNIMQIWQMAENIY 408
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 63/234 (26%), Positives = 100/234 (42%)
Query: 26 LATASSDYSIKI--IGVGNNTSQHL-AK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D+++ + I G + + AK +GH V +VAW H S+ S + D
Sbjct: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW-HLLHESLFGSVADDQK 250
Query: 81 VIIWKEGNSNEWIK-DHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGW 139
++IW + SN K H+ + H + VN + + P+ LA GS+D ++++ R
Sbjct: 251 LMIW-DTRSNTTSKPSHLVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR--NLK 306
Query: 140 DTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWK 198
++H + V W+P + + L S G D + VW L G +
Sbjct: 307 LKLHTFESHKDEIFQVHWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQ 353
Query: 199 M-----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + IW +A
Sbjct: 354 SAEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQIWQMA 404
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW--KEGNSNEWIKDH--VFEDHKSSV 105
+L GH+ + ++W G +L S S D TV +W G I D +F H + V
Sbjct: 171 RLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 229
Query: 106 NSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163
+ W H L L GS D + ++ R++ S + AH V +S+ P
Sbjct: 230 EDVAW--HLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPY--- 283
Query: 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGL 223
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 284 -----SEFI-----LATGSADKTVALWDLRNLKLKLHTF---ESHKDEIFQVHWSPH--- 327
Query: 224 PKSTIASASEDGKVIIWTVAREGDQWEGKVLHD 256
++ +AS+ D ++ +W +++ G++ + D
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 49/196 (25%), Positives = 87/196 (44%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGVGNNTSQHLAKL-SGHKGAVWEVAW 63
I TGH V DVA + L + + D + I +NT+ + L H V +++
Sbjct: 221 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSF 280
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 281 -NPYSEFILATGSADKTVALWDLRNLK--LKLHTFESHKDEIFQVHWSPHNETI-LASSG 336
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G ++ + P + + + A + +P + +CS
Sbjct: 337 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 392
Query: 182 GCDNTVKVWKLYNGIW 197
DN +++W++ I+
Sbjct: 393 SEDNIMQIWQMAENIY 408
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 63/234 (26%), Positives = 100/234 (42%)
Query: 26 LATASSDYSIKI--IGVGNNTSQHL-AK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D+++ + I G + + AK +GH V +VAW H S+ S + D
Sbjct: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW-HLLHESLFGSVADDQK 250
Query: 81 VIIWKEGNSNEWIK-DHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGW 139
++IW + SN K H+ + H + VN + + P+ LA GS+D ++++ R
Sbjct: 251 LMIW-DTRSNTTSKPSHLVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR--NLK 306
Query: 140 DTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWK 198
++H + V W+P + + L S G D + VW L G +
Sbjct: 307 LKLHTFESHKDEIFQVHWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQ 353
Query: 199 M-----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + IW +A
Sbjct: 354 SAEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQIWQMA 404
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW--KEGNSNEWIKDH--VFEDHKSSV 105
+L GH+ + ++W G +L S S D TV +W G I D +F H + V
Sbjct: 171 RLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 229
Query: 106 NSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163
+ W H L L GS D + ++ R++ S + AH V +S+ P
Sbjct: 230 EDVAW--HLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPY--- 283
Query: 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGL 223
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 284 -----SEFI-----LATGSADKTVALWDLRNLKLKLHTF---ESHKDEIFQVHWSPH--- 327
Query: 224 PKSTIASASEDGKVIIWTVAREGDQWEGKVLHD 256
++ +AS+ D ++ +W +++ G++ + D
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 49/196 (25%), Positives = 87/196 (44%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGVGNNTSQHLAKL-SGHKGAVWEVAW 63
I TGH V DVA + L + + D + I +NT+ + L H V +++
Sbjct: 221 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSF 280
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 281 -NPYSEFILATGSADKTVALWDLRNLK--LKLHTFESHKDEIFQVHWSPHNETI-LASSG 336
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G ++ + P + + + A + +P + +CS
Sbjct: 337 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 392
Query: 182 GCDNTVKVWKLYNGIW 197
DN +++W++ I+
Sbjct: 393 SEDNIMQIWQMAENIY 408
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 63/234 (26%), Positives = 100/234 (42%)
Query: 26 LATASSDYSIKI--IGVGNNTSQHL-AK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D+++ + I G + + AK +GH V +VAW H S+ S + D
Sbjct: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW-HLLHESLFGSVADDQK 250
Query: 81 VIIWKEGNSNEWIK-DHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGW 139
++IW + SN K H+ + H + VN + + P+ LA GS+D ++++ R
Sbjct: 251 LMIW-DTRSNTTSKPSHLVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR--NLK 306
Query: 140 DTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWK 198
++H + V W+P + + L S G D + VW L G +
Sbjct: 307 LKLHTFESHKDEIFQVHWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQ 353
Query: 199 M-----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + IW +A
Sbjct: 354 SAEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQIWQMA 404
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW--KEGNSNEWIKDH--VFEDHKSSV 105
+L GH+ + ++W G +L S S D TV +W G I D +F H + V
Sbjct: 171 RLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 229
Query: 106 NSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163
+ W H L L GS D + ++ R++ S + AH V +S+ P
Sbjct: 230 EDVAW--HLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPY--- 283
Query: 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGL 223
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 284 -----SEFI-----LATGSADKTVALWDLRNLKLKLHTF---ESHKDEIFQVHWSPH--- 327
Query: 224 PKSTIASASEDGKVIIWTVAREGDQWEGKVLHD 256
++ +AS+ D ++ +W +++ G++ + D
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 49/196 (25%), Positives = 87/196 (44%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGVGNNTSQHLAKL-SGHKGAVWEVAW 63
I TGH V DVA + L + + D + I +NT+ + L H V +++
Sbjct: 221 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSF 280
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 281 -NPYSEFILATGSADKTVALWDLRNLK--LKLHTFESHKDEIFQVHWSPHNETI-LASSG 336
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G ++ + P + + + A + +P + +CS
Sbjct: 337 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 392
Query: 182 GCDNTVKVWKLYNGIW 197
DN +++W++ I+
Sbjct: 393 SEDNIMQIWQMAENIY 408
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 63/234 (26%), Positives = 100/234 (42%)
Query: 26 LATASSDYSIKI--IGVGNNTSQHL-AK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D+++ + I G + + AK +GH V +VAW H S+ S + D
Sbjct: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW-HLLHESLFGSVADDQK 250
Query: 81 VIIWKEGNSNEWIK-DHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGW 139
++IW + SN K H+ + H + VN + + P+ LA GS+D ++++ R
Sbjct: 251 LMIW-DTRSNTTSKPSHLVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR--NLK 306
Query: 140 DTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWK 198
++H + V W+P + + L S G D + VW L G +
Sbjct: 307 LKLHTFESHKDEIFQVHWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQ 353
Query: 199 M-----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + IW +A
Sbjct: 354 SAEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQIWQMA 404
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW--KEGNSNEWIKDH--VFEDHKSSV 105
+L GH+ + ++W G +L S S D TV +W G I D +F H + V
Sbjct: 171 RLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 229
Query: 106 NSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163
+ W H L L GS D + ++ R++ S + AH V +S+ P
Sbjct: 230 EDVAW--HLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPY--- 283
Query: 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGL 223
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 284 -----SEFI-----LATGSADKTVALWDLRNLKLKLHTF---ESHKDEIFQVHWSPH--- 327
Query: 224 PKSTIASASEDGKVIIWTVAREGDQWEGKVLHD 256
++ +AS+ D ++ +W +++ G++ + D
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 49/196 (25%), Positives = 87/196 (44%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGVGNNTSQHLAKL-SGHKGAVWEVAW 63
I TGH V DVA + L + + D + I +NT+ + L H V +++
Sbjct: 221 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSF 280
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 281 -NPYSEFILATGSADKTVALWDLRNLK--LKLHTFESHKDEIFQVHWSPHNETI-LASSG 336
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G ++ + P + + + A + +P + +CS
Sbjct: 337 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 392
Query: 182 GCDNTVKVWKLYNGIW 197
DN +++W++ I+
Sbjct: 393 SEDNIMQIWQMAENIY 408
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 63/234 (26%), Positives = 100/234 (42%)
Query: 26 LATASSDYSIKI--IGVGNNTSQHL-AK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D+++ + I G + + AK +GH V +VAW H S+ S + D
Sbjct: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW-HLLHESLFGSVADDQK 250
Query: 81 VIIWKEGNSNEWIK-DHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGW 139
++IW + SN K H+ + H + VN + + P+ LA GS+D ++++ R
Sbjct: 251 LMIW-DTRSNTTSKPSHLVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR--NLK 306
Query: 140 DTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWK 198
++H + V W+P + + L S G D + VW L G +
Sbjct: 307 LKLHTFESHKDEIFQVHWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQ 353
Query: 199 M-----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + IW +A
Sbjct: 354 SAEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQIWQMA 404
>TAIR|locus:2014210 [details] [associations]
symbol:SEH1H "AT1G64350" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006626 "protein targeting to mitochondrion" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 GO:GO:0005635 Gene3D:2.130.10.10 SUPFAM:SSF50978
KO:K14299 EMBL:AF370222 EMBL:AY059116 IPI:IPI00519579
RefSeq:NP_564830.1 UniGene:At.25592 ProteinModelPortal:Q93VR9
SMR:Q93VR9 STRING:Q93VR9 PRIDE:Q93VR9 EnsemblPlants:AT1G64350.1
GeneID:842741 KEGG:ath:AT1G64350 TAIR:At1g64350 InParanoid:Q93VR9
OMA:WAPNIGR PhylomeDB:Q93VR9 ProtClustDB:CLSN2689020
ArrayExpress:Q93VR9 Genevestigator:Q93VR9 Uniprot:Q93VR9
Length = 326
Score = 135 (52.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 62/270 (22%), Positives = 111/270 (41%)
Query: 42 NNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN----EWIKDHV 97
++T +K+ + ++ ++ W ++G +A DG++ IW+E + + EW
Sbjct: 43 SSTFSCTSKVRVSESSIVKIVWLPSEYGDAVACVCEDGSLSIWEELSEDAHGLEWKLCKS 102
Query: 98 FEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARAD---GGWDTSR-----IDQAHP 149
++ S V + + L + SDG + VF W ID
Sbjct: 103 MKNKSSQVLDVQFGVSRKSLKMVAAYSDGYLRVFELLNPLELKNWQLQAEFQNVIDSLST 162
Query: 150 VGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD---NTVKVWKL--YNGIWKMDCFPA 204
+G S S + S + + G +P L N+ K+W+ + W A
Sbjct: 163 LGKPS-SLSASVSWNPMKGEE-QEPSFVLAFNSDSPHLNSSKIWEFDEAHNRWLAVAELA 220
Query: 205 L-QMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKV-------LHD 256
L + D V ++WAPN+G P +A A+ G + IW V D EG++ L
Sbjct: 221 LPEDKGDPVYALSWAPNIGRPYEVVAVATHKG-IGIWHVGLAPDL-EGRLPVKKVSSLSG 278
Query: 257 FKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
+ V+++ W ++G LA + V LW+
Sbjct: 279 HQGEVWQMEWDMSGMTLASTGSDGMVKLWQ 308
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 109 (43.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 29/107 (27%), Positives = 56/107 (52%)
Query: 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWA 64
K+ TGH +V + + Y + + T SSD ++++ V NT + L L H AV
Sbjct: 242 KVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV-----L 292
Query: 65 HPKFGS-ILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDW 110
H +F + ++ +CS D ++ +W ++ + V H+++VN +D+
Sbjct: 293 HLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 339
Score = 72 (30.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
SG DNT+++W + G C L+ H + VR + + I S + DGK+ +
Sbjct: 386 SGSSDNTIRLWDIECGA----CLRVLEGHEELVRCIRF------DNKRIVSGAYDGKIKV 435
Query: 240 W 240
W
Sbjct: 436 W 436
Score = 54 (24.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG 235
+++ SG D +KVW L + L + T V L + I S+S D
Sbjct: 422 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT-LVEHSGRVFRLQFDEFQIISSSHDD 480
Query: 236 KVIIW 240
++IW
Sbjct: 481 TILIW 485
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 109 (43.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 29/107 (27%), Positives = 56/107 (52%)
Query: 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWA 64
K+ TGH +V + + Y + + T SSD ++++ V NT + L L H AV
Sbjct: 242 KVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV-----L 292
Query: 65 HPKFGS-ILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDW 110
H +F + ++ +CS D ++ +W ++ + V H+++VN +D+
Sbjct: 293 HLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 339
Score = 72 (30.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
SG DNT+++W + G C L+ H + VR + + I S + DGK+ +
Sbjct: 386 SGSSDNTIRLWDIECGA----CLRVLEGHEELVRCIRF------DNKRIVSGAYDGKIKV 435
Query: 240 W 240
W
Sbjct: 436 W 436
Score = 54 (24.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG 235
+++ SG D +KVW L + L + T V L + I S+S D
Sbjct: 422 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT-LVEHSGRVFRLQFDEFQIISSSHDD 480
Query: 236 KVIIW 240
++IW
Sbjct: 481 TILIW 485
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 44/143 (30%), Positives = 66/143 (46%)
Query: 51 LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED-HKSSVNSID 109
L+GH +V ++ W+ P S+LASCS D T+ IW S + ED H+S VN I
Sbjct: 265 LAGHSQSVEDLQWS-PNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVIS 323
Query: 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 169
W +E +A G DG + ++ R + H +T+V W+P+ A
Sbjct: 324 WNRNEP--FIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEAT------ 375
Query: 170 GFLDPVQKLCSGGCDNTVKVWKL 192
L SGG D+ + +W L
Sbjct: 376 -------VLASGGDDDQIALWDL 391
Score = 127 (49.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 47/193 (24%), Positives = 77/193 (39%)
Query: 98 FEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQA-HPVGVTSVS 156
F H+ +IDW+P G+ LA G +I V+T DG W + A H V +
Sbjct: 218 FGGHQQEGFAIDWSPSADGV-LATGDCRRDIHVWTPVEDGTWKVDQRPLAGHSQSVEDLQ 276
Query: 157 WAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVA 216
W+P+ +++ S CS D T+++W K H V ++
Sbjct: 277 WSPNER--SVLAS---------CS--VDKTIRIWDCRASPQKACMLTCEDAHQSDVNVIS 323
Query: 217 WAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWS-LTGNILAV 275
W N + IAS +DG + IW + + + + V WS +LA
Sbjct: 324 WNRN----EPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLAS 379
Query: 276 ADGNNNVTLWEEA 288
++ + LW+ A
Sbjct: 380 GGDDDQIALWDLA 392
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 109 (43.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 29/107 (27%), Positives = 56/107 (52%)
Query: 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWA 64
K+ TGH +V + + Y + + T SSD ++++ V NT + L L H AV
Sbjct: 259 KVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV-----L 309
Query: 65 HPKFGS-ILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDW 110
H +F + ++ +CS D ++ +W ++ + V H+++VN +D+
Sbjct: 310 HLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 356
Score = 72 (30.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
SG DNT+++W + G C L+ H + VR + + I S + DGK+ +
Sbjct: 403 SGSSDNTIRLWDIECGA----CLRVLEGHEELVRCIRF------DNKRIVSGAYDGKIKV 452
Query: 240 W 240
W
Sbjct: 453 W 453
Score = 54 (24.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG 235
+++ SG D +KVW L + L + T V L + I S+S D
Sbjct: 439 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT-LVEHSGRVFRLQFDEFQIISSSHDD 497
Query: 236 KVIIW 240
++IW
Sbjct: 498 TILIW 502
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 72/287 (25%), Positives = 110/287 (38%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
+ H + V D+A + T D +IKI N + LSGH V W HP
Sbjct: 215 SAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERT--LSGHHWEVKSADW-HPN 271
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G ++ S S D V +W ++N H F K +VN + P+ LA S D +
Sbjct: 272 LG-LIVSGSKDNLVKLWDPRSANCVSTLHGF---KHTVNKTRFQPNGTARLLASVSRDRS 327
Query: 128 ISVFTARA--------DGGWDTSRIDQAHPVGVTSVSWAP--STAPGALVGSGFLDPVQK 177
+F R D D S + HP+ + V+ A + L+ S D +
Sbjct: 328 CRIFDLRTMKDMLVIRDSETDLSCVAW-HPIHASMVTTAAYNGSISNFLLDSYIPDSNES 386
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ +N+ N I + P H + V + P LG + +A D
Sbjct: 387 VPKRSNNNSNLSTNTNNTIDAVQKIP--YAHEKAIHAVEYHP-LG---HLLCTAGSDKTA 440
Query: 238 IIWTVAREGDQ--WEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNV 282
W+ AR D W+ V D K + +S+ N+ AV + N V
Sbjct: 441 RFWSRARPNDPMAWKDAVYTDSKAGAWY--YSVNNNVNAVMEDPNAV 485
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 72/287 (25%), Positives = 110/287 (38%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
+ H + V D+A + T D +IKI N + LSGH V W HP
Sbjct: 215 SAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERT--LSGHHWEVKSADW-HPN 271
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
G ++ S S D V +W ++N H F K +VN + P+ LA S D +
Sbjct: 272 LG-LIVSGSKDNLVKLWDPRSANCVSTLHGF---KHTVNKTRFQPNGTARLLASVSRDRS 327
Query: 128 ISVFTARA--------DGGWDTSRIDQAHPVGVTSVSWAP--STAPGALVGSGFLDPVQK 177
+F R D D S + HP+ + V+ A + L+ S D +
Sbjct: 328 CRIFDLRTMKDMLVIRDSETDLSCVAW-HPIHASMVTTAAYNGSISNFLLDSYIPDSNES 386
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ +N+ N I + P H + V + P LG + +A D
Sbjct: 387 VPKRSNNNSNLSTNTNNTIDAVQKIP--YAHEKAIHAVEYHP-LG---HLLCTAGSDKTA 440
Query: 238 IIWTVAREGDQ--WEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNV 282
W+ AR D W+ V D K + +S+ N+ AV + N V
Sbjct: 441 RFWSRARPNDPMAWKDAVYTDSKAGAWY--YSVNNNVNAVMEDPNAV 485
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 109 (43.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 29/107 (27%), Positives = 56/107 (52%)
Query: 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWA 64
K+ TGH +V + + Y + + T SSD ++++ V NT + L L H AV
Sbjct: 261 KVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV-----L 311
Query: 65 HPKFGS-ILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDW 110
H +F + ++ +CS D ++ +W ++ + V H+++VN +D+
Sbjct: 312 HLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 358
Score = 72 (30.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
SG DNT+++W + G C L+ H + VR + + I S + DGK+ +
Sbjct: 405 SGSSDNTIRLWDIECGA----CLRVLEGHEELVRCIRF------DNKRIVSGAYDGKIKV 454
Query: 240 W 240
W
Sbjct: 455 W 455
Score = 54 (24.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG 235
+++ SG D +KVW L + L + T V L + I S+S D
Sbjct: 441 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT-LVEHSGRVFRLQFDEFQIISSSHDD 499
Query: 236 KVIIW 240
++IW
Sbjct: 500 TILIW 504
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 109 (43.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 29/107 (27%), Positives = 56/107 (52%)
Query: 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWA 64
K+ TGH +V + + Y + + T SSD ++++ V NT + L L H AV
Sbjct: 262 KVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV-----L 312
Query: 65 HPKFGS-ILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDW 110
H +F + ++ +CS D ++ +W ++ + V H+++VN +D+
Sbjct: 313 HLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 359
Score = 72 (30.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
SG DNT+++W + G C L+ H + VR + + I S + DGK+ +
Sbjct: 406 SGSSDNTIRLWDIECGA----CLRVLEGHEELVRCIRF------DNKRIVSGAYDGKIKV 455
Query: 240 W 240
W
Sbjct: 456 W 456
Score = 54 (24.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG 235
+++ SG D +KVW L + L + T V L + I S+S D
Sbjct: 442 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT-LVEHSGRVFRLQFDEFQIISSSHDD 500
Query: 236 KVIIW 240
++IW
Sbjct: 501 TILIW 505
>ZFIN|ZDB-GENE-040808-14 [details] [associations]
symbol:thoc3 "THO complex 3" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040808-14 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 KO:K12880
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:BX511257 EMBL:BC079495 EMBL:BC152622
IPI:IPI00485776 RefSeq:NP_001003758.1 UniGene:Dr.78573
STRING:Q6AXK9 Ensembl:ENSDART00000079016 GeneID:445302
KEGG:dre:445302 InParanoid:Q6AXK9 NextBio:20832048 Uniprot:Q6AXK9
Length = 322
Score = 105 (42.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 37/148 (25%), Positives = 59/148 (39%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFG 69
H VH VA GKRLA+ S D + + + + GH +V ++ W HP
Sbjct: 25 HSAKVHSVAWSCDGKRLASGSFDKTASVFVLEKDRLVKENNYRGHGDSVDQLCW-HPTNP 83
Query: 70 SILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNIS 129
+ + S D T+ IW + K K +I W+P G +A G+ D ++
Sbjct: 84 DLFVTASGDKTIRIWDVRTT----KCMATVSTKGENINICWSPD--GQTIAVGNKDDVVT 137
Query: 130 VFTARADGGWDTSRIDQAHPVGVTSVSW 157
A+ R ++ V +SW
Sbjct: 138 FIDAKTH----RPRAEEQFKFEVNEISW 161
Score = 70 (29.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 31/106 (29%), Positives = 49/106 (46%)
Query: 173 DPVQK-LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDW-VRDVAWAPNLGLPKSTIAS 230
DP K +G D V +W + + + CF L DW VR ++++ + G +AS
Sbjct: 204 DPTGKYFATGSADALVSLWNVEELVC-VRCFSRL----DWPVRTLSFSHD-G---KMLAS 254
Query: 231 ASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVA 276
ASED + I V WE + ++P + V+W +LA A
Sbjct: 255 ASEDHFIDIAEVETGEKLWEIQC----ESPTFTVAWHPKRPLLAYA 296
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW--KEGNSNEWIKDH--VFEDHKSSV 105
+L GH+ + ++W G +L S S D TV +W G I D +F H + V
Sbjct: 215 RLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 273
Query: 106 NSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163
+ W H L L GS D + ++ R++ S + AH V +S+ P
Sbjct: 274 EDVAW--HLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPY--- 327
Query: 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGL 223
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 328 -----SEFI-----LATGSADKTVALWDLRNLKLKLHTF---ESHKDEIFQVHWSPH--- 371
Query: 224 PKSTIASASEDGKVIIWTVAREGDQWEGKVLHD 256
++ +AS+ D ++ +W +++ G++ + D
Sbjct: 372 NETILASSGTDRRLNVWDLSKIGEEQSAEDAED 404
Score = 136 (52.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 49/196 (25%), Positives = 87/196 (44%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGVGNNTSQHLAKL-SGHKGAVWEVAW 63
I TGH V DVA + L + + D + I +NT+ + L H V +++
Sbjct: 265 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSF 324
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 325 -NPYSEFILATGSADKTVALWDLRNLK--LKLHTFESHKDEIFQVHWSPHNETI-LASSG 380
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G ++ + P + + + A + +P + +CS
Sbjct: 381 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 436
Query: 182 GCDNTVKVWKLYNGIW 197
DN +++W++ I+
Sbjct: 437 SEDNIMQIWQMAENIY 452
Score = 128 (50.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 63/234 (26%), Positives = 100/234 (42%)
Query: 26 LATASSDYSIKI--IGVGNNTSQHL-AK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D+++ + I G + + AK +GH V +VAW H S+ S + D
Sbjct: 236 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW-HLLHESLFGSVADDQK 294
Query: 81 VIIWKEGNSNEWIK-DHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGW 139
++IW + SN K H+ + H + VN + + P+ LA GS+D ++++ R
Sbjct: 295 LMIW-DTRSNTTSKPSHLVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR--NLK 350
Query: 140 DTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWK 198
++H + V W+P + + L S G D + VW L G +
Sbjct: 351 LKLHTFESHKDEIFQVHWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQ 397
Query: 199 M-----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + IW +A
Sbjct: 398 SAEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQIWQMA 448
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 55/213 (25%), Positives = 94/213 (44%)
Query: 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW--KEGNSNEWIKDH--VFEDHKSSV 105
+L GH+ + ++W G +L S S D TV +W G I D +F H + V
Sbjct: 215 RLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 273
Query: 106 NSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163
+ W H L L GS D + ++ R++ S + AH V +S+ P
Sbjct: 274 EDVAW--HLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPY--- 327
Query: 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGL 223
S F+ L +G D TV +W L N K+ F + H D + V W+P+
Sbjct: 328 -----SEFI-----LATGSADKTVALWDLRNLKLKLHTF---ESHKDEIFQVHWSPH--- 371
Query: 224 PKSTIASASEDGKVIIWTVAREGDQWEGKVLHD 256
++ +AS+ D ++ +W +++ G++ + D
Sbjct: 372 NETILASSGTDRRLNVWDLSKIGEEQSAEDAED 404
Score = 136 (52.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 49/196 (25%), Positives = 87/196 (44%)
Query: 6 IETGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGVGNNTSQHLAKL-SGHKGAVWEVAW 63
I TGH V DVA + L + + D + I +NT+ + L H V +++
Sbjct: 265 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSF 324
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P ILA+ S D TV +W N +K H FE HK + + W+PH + LA
Sbjct: 325 -NPYSEFILATGSADKTVALWDLRNLK--LKLHTFESHKDEIFQVHWSPHNETI-LASSG 380
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK--LCSG 181
+D ++V+ G ++ + P + + + A + +P + +CS
Sbjct: 381 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT----AKISDFSWNPNEPWVICSV 436
Query: 182 GCDNTVKVWKLYNGIW 197
DN +++W++ I+
Sbjct: 437 SEDNIMQIWQMAENIY 452
Score = 128 (50.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 63/234 (26%), Positives = 100/234 (42%)
Query: 26 LATASSDYSIKI--IGVGNNTSQHL-AK--LSGHKGAVWEVAWAHPKFGSILASCSFDGT 80
L +AS D+++ + I G + + AK +GH V +VAW H S+ S + D
Sbjct: 236 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW-HLLHESLFGSVADDQK 294
Query: 81 VIIWKEGNSNEWIK-DHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGW 139
++IW + SN K H+ + H + VN + + P+ LA GS+D ++++ R
Sbjct: 295 LMIW-DTRSNTTSKPSHLVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLR--NLK 350
Query: 140 DTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWK 198
++H + V W+P + + L S G D + VW L G +
Sbjct: 351 LKLHTFESHKDEIFQVHWSPHN-----------ETI--LASSGTDRRLNVWDLSKIGEEQ 397
Query: 199 M-----DCFPALQM----HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243
D P L HT + D +W PN I S SED + IW +A
Sbjct: 398 SAEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWVICSVSEDNIMQIWQMA 448
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 128 (50.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 40/146 (27%), Positives = 72/146 (49%)
Query: 46 QHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSV 105
+HL L GH A+ V +++ G++LAS S D T+I+W N + H +E H S +
Sbjct: 34 RHLKTLEGHTAAISCVKFSND--GNLLASASVDKTMILWSATN---YSLIHRYEGHSSGI 88
Query: 106 NSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGA 165
+ + W+ C A S D + ++ AR+ ++ ++ + H V V++ P P
Sbjct: 89 SDLAWSSDSHYTCSA--SDDCTLRIWDARSP--YECLKVLRGHTNFVFCVNFNP---PSN 141
Query: 166 LVGSGFLDP---VQKLCSGGCDNTVK 188
L+ SG D + ++ +G C +K
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIK 167
Score = 111 (44.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 47/187 (25%), Positives = 85/187 (45%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH + D+A +AS D +++I + + L L GH V+ V + P
Sbjct: 83 GHSSGISDLAWSSDSHYTCSASDDCTLRIWDA-RSPYECLKVLRGHTNFVFCVNFNPPS- 140
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
+++ S SFD T+ IW E + + ++ + + H ++S+ + + G + S DG+
Sbjct: 141 -NLIVSGSFDETIRIW-EVKTGKCVR--MIKAHSMPISSVHF--NRDGSLIVSASHDGSC 194
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVK 188
++ A+ +G + ID P +VS+A + G + LD KL + T K
Sbjct: 195 KIWDAK-EGTCLKTLIDDKSP----AVSFAKFSPNGKFILVATLDSTLKLSNYA---TGK 246
Query: 189 VWKLYNG 195
K+Y G
Sbjct: 247 FLKVYTG 253
Score = 44 (20.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASE--DG 235
+ SG DN V +W L + L+ HTD V V+ P ++ I+S+ D
Sbjct: 273 IVSGSEDNCVYLWDLQ----ARNILQRLEGHTDAVISVSCHP----VQNEISSSGNHLDK 324
Query: 236 KVIIW 240
+ IW
Sbjct: 325 TIRIW 329
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 109 (43.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 29/107 (27%), Positives = 56/107 (52%)
Query: 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWA 64
K+ TGH +V + + Y + + T SSD ++++ V NT + L L H AV
Sbjct: 274 KVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV-----L 324
Query: 65 HPKFGS-ILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDW 110
H +F + ++ +CS D ++ +W ++ + V H+++VN +D+
Sbjct: 325 HLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 371
Score = 72 (30.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
SG DNT+++W + G C L+ H + VR + + I S + DGK+ +
Sbjct: 418 SGSSDNTIRLWDIECGA----CLRVLEGHEELVRCIRF------DNKRIVSGAYDGKIKV 467
Query: 240 W 240
W
Sbjct: 468 W 468
Score = 54 (24.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG 235
+++ SG D +KVW L + L + T V L + I S+S D
Sbjct: 454 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT-LVEHSGRVFRLQFDEFQIISSSHDD 512
Query: 236 KVIIW 240
++IW
Sbjct: 513 TILIW 517
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 109 (43.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 29/107 (27%), Positives = 56/107 (52%)
Query: 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWA 64
K+ TGH +V + + Y + + T SSD ++++ V NT + L L H AV
Sbjct: 274 KVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV-----L 324
Query: 65 HPKFGS-ILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDW 110
H +F + ++ +CS D ++ +W ++ + V H+++VN +D+
Sbjct: 325 HLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 371
Score = 72 (30.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
SG DNT+++W + G C L+ H + VR + + I S + DGK+ +
Sbjct: 418 SGSSDNTIRLWDIECGA----CLRVLEGHEELVRCIRF------DNKRIVSGAYDGKIKV 467
Query: 240 W 240
W
Sbjct: 468 W 468
Score = 54 (24.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG 235
+++ SG D +KVW L + L + T V L + I S+S D
Sbjct: 454 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT-LVEHSGRVFRLQFDEFQIISSSHDD 512
Query: 236 KVIIW 240
++IW
Sbjct: 513 TILIW 517
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 109 (43.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 29/107 (27%), Positives = 56/107 (52%)
Query: 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWA 64
K+ TGH +V + + Y + + T SSD ++++ V NT + L L H AV
Sbjct: 274 KVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV-----L 324
Query: 65 HPKFGS-ILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDW 110
H +F + ++ +CS D ++ +W ++ + V H+++VN +D+
Sbjct: 325 HLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 371
Score = 72 (30.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239
SG DNT+++W + G C L+ H + VR + + I S + DGK+ +
Sbjct: 418 SGSSDNTIRLWDIECGA----CLRVLEGHEELVRCIRF------DNKRIVSGAYDGKIKV 467
Query: 240 W 240
W
Sbjct: 468 W 468
Score = 54 (24.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG 235
+++ SG D +KVW L + L + T V L + I S+S D
Sbjct: 454 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRT-LVEHSGRVFRLQFDEFQIISSSHDD 512
Query: 236 KVIIW 240
++IW
Sbjct: 513 TILIW 517
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 74/258 (28%), Positives = 108/258 (41%)
Query: 2 PPQKIETGHEDTVHDVAMDYYGK-RLATASSDYSIKI--IGVGNNTSQHLAKLS---GHK 55
P K+ TGH+ + ++ + + L + S D SI + I + + L L+ GH
Sbjct: 166 PNLKL-TGHKKEGYGISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGHT 224
Query: 56 GAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHEL 115
V +VAW H + S D ++IW + I HV E H S VN + + P
Sbjct: 225 SIVEDVAW-HYIHDTFFGSVGDDKKLMIWDTRTGTKPI--HVVEAHNSEVNCLSFNPF-C 280
Query: 116 GLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPV 175
+A GS+D ++++ R G S I +H V V ++P + V
Sbjct: 281 EFLVATGSTDKTVALWDMRNLGNRLHSLI--SHTDEVFQVQFSPHN-----------ETV 327
Query: 176 QKLCSGGCDNTVKVWKL------YNGIWKMDCFPALQM----HTDWVRDVAWAPNLGLPK 225
L S G D V VW L N D P L HT + D +W PN P
Sbjct: 328 --LASCGSDRRVNVWDLSRIGEEQNNEDAADGPPELLFIHGGHTSKISDFSWNPND--PW 383
Query: 226 STIASASEDGKVIIWTVA 243
S IAS +ED + IW +A
Sbjct: 384 S-IASVAEDNILQIWQMA 400
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 113 (44.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 49/182 (26%), Positives = 86/182 (47%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH V V G+ LA++S+D IKI G + + +SGHK + +VAW+
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT--ISGHKLGISDVAWSSDS- 99
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
++L S S D T+ IW + +S + +K + H + V ++ P L ++ GS D ++
Sbjct: 100 -NLLVSASDDKTLKIW-DVSSGKCLK--TLKGHSNYVFCCNFNPQS-NLIVS-GSFDESV 153
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL---CSGGCDN 185
++ + T AH V++V + G+L+ S D + ++ SG C
Sbjct: 154 RIWDVKTGKCLKTL---PAHSDPVSAVHF---NRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Query: 186 TV 187
T+
Sbjct: 208 TL 209
Score = 102 (41.0 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 46/175 (26%), Positives = 84/175 (48%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAW 63
+K +GH+ + DVA L +AS D ++KI V ++ + L L GH V+ +
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV--SSGKCLKTLKGHSNYVFCCNF 137
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P+ +++ S SFD +V IW + + + +K H V+++ + + G + S
Sbjct: 138 -NPQ-SNLIVSGSFDESVRIW-DVKTGKCLK--TLPAHSDPVSAVHF--NRDGSLIVSSS 190
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
DG ++ A G + ID +P V+ V ++P+ G + + LD KL
Sbjct: 191 YDGLCRIWDT-ASGQCLKTLIDDDNPP-VSFVKFSPN---GKYILAATLDNTLKL 240
Score = 99 (39.9 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 32/109 (29%), Positives = 47/109 (43%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ SG D +V++W + G C L H+D V V + S I S+S DG
Sbjct: 144 IVSGSFDESVRIWDVKTG----KCLKTLPAHSDPVSAV----HFNRDGSLIVSSSYDGLC 195
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
IW A Q ++ D PV V +S G + A +N + LW+
Sbjct: 196 RIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 72 (30.4 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 101 HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
H +V+S+ ++P+ G LA S+D I ++ A DG ++ + H +G++ V+W S
Sbjct: 44 HTKAVSSVKFSPN--GEWLASSSADKLIKIWGAY-DGKFE--KTISGHKLGISDVAW--S 96
Query: 161 TAPGALVGSGFLDPVQKL---CSGGCDNTVK 188
+ LV + D K+ SG C T+K
Sbjct: 97 SDSNLLVSASD-DKTLKIWDVSSGKCLKTLK 126
Score = 61 (26.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 23/65 (35%), Positives = 31/65 (47%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASAS-EDGK 236
+ SG DN V +W L + LQ HTD V A P ++ IASA+ E+ K
Sbjct: 274 IVSGSEDNLVYIWNLQT----KEVVQKLQGHTDVVISTACHPT----ENIIASAALENDK 325
Query: 237 VI-IW 240
I +W
Sbjct: 326 TIKLW 330
Score = 56 (24.8 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 30/107 (28%), Positives = 44/107 (41%)
Query: 184 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST-IASASEDGKVIIWTV 242
DNT+K+W G C H + + +A N + I S SED V IW +
Sbjct: 235 DNTLKLWDYSKG----KCLKTYTCHKN-EKYCIFA-NFSVTGGKWIVSGSEDNLVYIWNL 288
Query: 243 -AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVA--DGNNNVTLWE 286
+E Q K L V + T NI+A A + + + LW+
Sbjct: 289 QTKEVVQ---K-LQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 113 (44.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 49/182 (26%), Positives = 86/182 (47%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH V V G+ LA++S+D IKI G + + +SGHK + +VAW+
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT--ISGHKLGISDVAWSSDS- 99
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
++L S S D T+ IW + +S + +K + H + V ++ P L ++ GS D ++
Sbjct: 100 -NLLVSASDDKTLKIW-DVSSGKCLK--TLKGHSNYVFCCNFNPQS-NLIVS-GSFDESV 153
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL---CSGGCDN 185
++ + T AH V++V + G+L+ S D + ++ SG C
Sbjct: 154 RIWDVKTGKCLKTL---PAHSDPVSAVHF---NRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Query: 186 TV 187
T+
Sbjct: 208 TL 209
Score = 102 (41.0 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 46/175 (26%), Positives = 84/175 (48%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAW 63
+K +GH+ + DVA L +AS D ++KI V ++ + L L GH V+ +
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV--SSGKCLKTLKGHSNYVFCCNF 137
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P+ +++ S SFD +V IW + + + +K H V+++ + + G + S
Sbjct: 138 -NPQ-SNLIVSGSFDESVRIW-DVKTGKCLK--TLPAHSDPVSAVHF--NRDGSLIVSSS 190
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
DG ++ A G + ID +P V+ V ++P+ G + + LD KL
Sbjct: 191 YDGLCRIWDT-ASGQCLKTLIDDDNPP-VSFVKFSPN---GKYILAATLDNTLKL 240
Score = 99 (39.9 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 32/109 (29%), Positives = 47/109 (43%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ SG D +V++W + G C L H+D V V + S I S+S DG
Sbjct: 144 IVSGSFDESVRIWDVKTG----KCLKTLPAHSDPVSAV----HFNRDGSLIVSSSYDGLC 195
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
IW A Q ++ D PV V +S G + A +N + LW+
Sbjct: 196 RIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 72 (30.4 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 101 HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
H +V+S+ ++P+ G LA S+D I ++ A DG ++ + H +G++ V+W S
Sbjct: 44 HTKAVSSVKFSPN--GEWLASSSADKLIKIWGAY-DGKFE--KTISGHKLGISDVAW--S 96
Query: 161 TAPGALVGSGFLDPVQKL---CSGGCDNTVK 188
+ LV + D K+ SG C T+K
Sbjct: 97 SDSNLLVSASD-DKTLKIWDVSSGKCLKTLK 126
Score = 61 (26.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 23/65 (35%), Positives = 31/65 (47%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASAS-EDGK 236
+ SG DN V +W L + LQ HTD V A P ++ IASA+ E+ K
Sbjct: 274 IVSGSEDNLVYIWNLQT----KEIVQKLQGHTDVVISTACHPT----ENIIASAALENDK 325
Query: 237 VI-IW 240
I +W
Sbjct: 326 TIKLW 330
Score = 53 (23.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 28/106 (26%), Positives = 43/106 (40%)
Query: 184 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST-IASASEDGKVIIWTV 242
DNT+K+W G C H + + +A N + I S SED V IW +
Sbjct: 235 DNTLKLWDYSKG----KCLKTYTGHKN-EKYCIFA-NFSVTGGKWIVSGSEDNLVYIWNL 288
Query: 243 AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVA--DGNNNVTLWE 286
+ + K L V + T NI+A A + + + LW+
Sbjct: 289 QTK--EIVQK-LQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 113 (44.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 49/182 (26%), Positives = 86/182 (47%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH V V G+ LA++S+D IKI G + + +SGHK + +VAW+
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT--ISGHKLGISDVAWSSDS- 99
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
++L S S D T+ IW + +S + +K + H + V ++ P L ++ GS D ++
Sbjct: 100 -NLLVSASDDKTLKIW-DVSSGKCLK--TLKGHSNYVFCCNFNPQS-NLIVS-GSFDESV 153
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL---CSGGCDN 185
++ + T AH V++V + G+L+ S D + ++ SG C
Sbjct: 154 RIWDVKTGKCLKTL---PAHSDPVSAVHF---NRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Query: 186 TV 187
T+
Sbjct: 208 TL 209
Score = 102 (41.0 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 46/175 (26%), Positives = 84/175 (48%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAW 63
+K +GH+ + DVA L +AS D ++KI V ++ + L L GH V+ +
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV--SSGKCLKTLKGHSNYVFCCNF 137
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P+ +++ S SFD +V IW + + + +K H V+++ + + G + S
Sbjct: 138 -NPQ-SNLIVSGSFDESVRIW-DVKTGKCLK--TLPAHSDPVSAVHF--NRDGSLIVSSS 190
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
DG ++ A G + ID +P V+ V ++P+ G + + LD KL
Sbjct: 191 YDGLCRIWDT-ASGQCLKTLIDDDNPP-VSFVKFSPN---GKYILAATLDNTLKL 240
Score = 99 (39.9 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 32/109 (29%), Positives = 47/109 (43%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ SG D +V++W + G C L H+D V V + S I S+S DG
Sbjct: 144 IVSGSFDESVRIWDVKTG----KCLKTLPAHSDPVSAV----HFNRDGSLIVSSSYDGLC 195
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
IW A Q ++ D PV V +S G + A +N + LW+
Sbjct: 196 RIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 72 (30.4 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 101 HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
H +V+S+ ++P+ G LA S+D I ++ A DG ++ + H +G++ V+W S
Sbjct: 44 HTKAVSSVKFSPN--GEWLASSSADKLIKIWGAY-DGKFE--KTISGHKLGISDVAW--S 96
Query: 161 TAPGALVGSGFLDPVQKL---CSGGCDNTVK 188
+ LV + D K+ SG C T+K
Sbjct: 97 SDSNLLVSASD-DKTLKIWDVSSGKCLKTLK 126
Score = 61 (26.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 23/65 (35%), Positives = 31/65 (47%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASAS-EDGK 236
+ SG DN V +W L + LQ HTD V A P ++ IASA+ E+ K
Sbjct: 274 IVSGSEDNLVYIWNLQT----KEIVQKLQGHTDVVISTACHPT----ENIIASAALENDK 325
Query: 237 VI-IW 240
I +W
Sbjct: 326 TIKLW 330
Score = 53 (23.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 28/106 (26%), Positives = 43/106 (40%)
Query: 184 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST-IASASEDGKVIIWTV 242
DNT+K+W G C H + + +A N + I S SED V IW +
Sbjct: 235 DNTLKLWDYSKG----KCLKTYTGHKN-EKYCIFA-NFSVTGGKWIVSGSEDNLVYIWNL 288
Query: 243 AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVA--DGNNNVTLWE 286
+ + K L V + T NI+A A + + + LW+
Sbjct: 289 QTK--EIVQK-LQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 113 (44.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 49/182 (26%), Positives = 86/182 (47%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH V V G+ LA++S+D IKI G + + +SGHK + +VAW+
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT--ISGHKLGISDVAWSSDS- 99
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
++L S S D T+ IW + +S + +K + H + V ++ P L ++ GS D ++
Sbjct: 100 -NLLVSASDDKTLKIW-DVSSGKCLK--TLKGHSNYVFCCNFNPQS-NLIVS-GSFDESV 153
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL---CSGGCDN 185
++ + T AH V++V + G+L+ S D + ++ SG C
Sbjct: 154 RIWDVKTGKCLKTL---PAHSDPVSAVHF---NRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Query: 186 TV 187
T+
Sbjct: 208 TL 209
Score = 102 (41.0 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 46/175 (26%), Positives = 84/175 (48%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAW 63
+K +GH+ + DVA L +AS D ++KI V ++ + L L GH V+ +
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV--SSGKCLKTLKGHSNYVFCCNF 137
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P+ +++ S SFD +V IW + + + +K H V+++ + + G + S
Sbjct: 138 -NPQ-SNLIVSGSFDESVRIW-DVKTGKCLK--TLPAHSDPVSAVHF--NRDGSLIVSSS 190
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
DG ++ A G + ID +P V+ V ++P+ G + + LD KL
Sbjct: 191 YDGLCRIWDT-ASGQCLKTLIDDDNPP-VSFVKFSPN---GKYILAATLDNTLKL 240
Score = 99 (39.9 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 32/109 (29%), Positives = 47/109 (43%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ SG D +V++W + G C L H+D V V + S I S+S DG
Sbjct: 144 IVSGSFDESVRIWDVKTG----KCLKTLPAHSDPVSAV----HFNRDGSLIVSSSYDGLC 195
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
IW A Q ++ D PV V +S G + A +N + LW+
Sbjct: 196 RIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 72 (30.4 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 101 HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
H +V+S+ ++P+ G LA S+D I ++ A DG ++ + H +G++ V+W S
Sbjct: 44 HTKAVSSVKFSPN--GEWLASSSADKLIKIWGAY-DGKFE--KTISGHKLGISDVAW--S 96
Query: 161 TAPGALVGSGFLDPVQKL---CSGGCDNTVK 188
+ LV + D K+ SG C T+K
Sbjct: 97 SDSNLLVSASD-DKTLKIWDVSSGKCLKTLK 126
Score = 61 (26.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 23/65 (35%), Positives = 31/65 (47%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASAS-EDGK 236
+ SG DN V +W L + LQ HTD V A P ++ IASA+ E+ K
Sbjct: 274 IVSGSEDNLVYIWNLQT----KEIVQKLQGHTDVVISTACHPT----ENIIASAALENDK 325
Query: 237 VI-IW 240
I +W
Sbjct: 326 TIKLW 330
Score = 53 (23.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 28/106 (26%), Positives = 43/106 (40%)
Query: 184 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST-IASASEDGKVIIWTV 242
DNT+K+W G C H + + +A N + I S SED V IW +
Sbjct: 235 DNTLKLWDYSKG----KCLKTYTGHKN-EKYCIFA-NFSVTGGKWIVSGSEDNLVYIWNL 288
Query: 243 AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVA--DGNNNVTLWE 286
+ + K L V + T NI+A A + + + LW+
Sbjct: 289 QTK--EIVQK-LQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 113 (44.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 49/182 (26%), Positives = 86/182 (47%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH V V G+ LA++S+D IKI G + + +SGHK + +VAW+
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT--ISGHKLGISDVAWSSDS- 99
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
++L S S D T+ IW + +S + +K + H + V ++ P L ++ GS D ++
Sbjct: 100 -NLLVSASDDKTLKIW-DVSSGKCLK--TLKGHSNYVFCCNFNPQS-NLIVS-GSFDESV 153
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL---CSGGCDN 185
++ + T AH V++V + G+L+ S D + ++ SG C
Sbjct: 154 RIWDVKTGKCLKTL---PAHSDPVSAVHF---NRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Query: 186 TV 187
T+
Sbjct: 208 TL 209
Score = 102 (41.0 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 46/175 (26%), Positives = 84/175 (48%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAW 63
+K +GH+ + DVA L +AS D ++KI V ++ + L L GH V+ +
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV--SSGKCLKTLKGHSNYVFCCNF 137
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P+ +++ S SFD +V IW + + + +K H V+++ + + G + S
Sbjct: 138 -NPQ-SNLIVSGSFDESVRIW-DVKTGKCLK--TLPAHSDPVSAVHF--NRDGSLIVSSS 190
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
DG ++ A G + ID +P V+ V ++P+ G + + LD KL
Sbjct: 191 YDGLCRIWDT-ASGQCLKTLIDDDNPP-VSFVKFSPN---GKYILAATLDNTLKL 240
Score = 99 (39.9 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 32/109 (29%), Positives = 47/109 (43%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ SG D +V++W + G C L H+D V V + S I S+S DG
Sbjct: 144 IVSGSFDESVRIWDVKTG----KCLKTLPAHSDPVSAV----HFNRDGSLIVSSSYDGLC 195
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
IW A Q ++ D PV V +S G + A +N + LW+
Sbjct: 196 RIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 72 (30.4 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 101 HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
H +V+S+ ++P+ G LA S+D I ++ A DG ++ + H +G++ V+W S
Sbjct: 44 HTKAVSSVKFSPN--GEWLASSSADKLIKIWGAY-DGKFE--KTISGHKLGISDVAW--S 96
Query: 161 TAPGALVGSGFLDPVQKL---CSGGCDNTVK 188
+ LV + D K+ SG C T+K
Sbjct: 97 SDSNLLVSASD-DKTLKIWDVSSGKCLKTLK 126
Score = 61 (26.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 23/65 (35%), Positives = 31/65 (47%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASAS-EDGK 236
+ SG DN V +W L + LQ HTD V A P ++ IASA+ E+ K
Sbjct: 274 IVSGSEDNLVYIWNLQT----KEIVQKLQGHTDVVISTACHPT----ENIIASAALENDK 325
Query: 237 VI-IW 240
I +W
Sbjct: 326 TIKLW 330
Score = 53 (23.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 28/106 (26%), Positives = 43/106 (40%)
Query: 184 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST-IASASEDGKVIIWTV 242
DNT+K+W G C H + + +A N + I S SED V IW +
Sbjct: 235 DNTLKLWDYSKG----KCLKTYTGHKN-EKYCIFA-NFSVTGGKWIVSGSEDNLVYIWNL 288
Query: 243 AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVA--DGNNNVTLWE 286
+ + K L V + T NI+A A + + + LW+
Sbjct: 289 QTK--EIVQK-LQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 113 (44.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 49/182 (26%), Positives = 86/182 (47%)
Query: 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF 68
GH V V G+ LA++S+D IKI G + + +SGHK + +VAW+
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT--ISGHKLGISDVAWSSDS- 99
Query: 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
++L S S D T+ IW + +S + +K + H + V ++ P L ++ GS D ++
Sbjct: 100 -NLLVSASDDKTLKIW-DVSSGKCLK--TLKGHSNYVFCCNFNPQS-NLIVS-GSFDESV 153
Query: 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL---CSGGCDN 185
++ + T AH V++V + G+L+ S D + ++ SG C
Sbjct: 154 RIWDVKTGKCLKTL---PAHSDPVSAVHF---NRDGSLIVSSSYDGLCRIWDTASGQCLK 207
Query: 186 TV 187
T+
Sbjct: 208 TL 209
Score = 102 (41.0 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 46/175 (26%), Positives = 84/175 (48%)
Query: 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAW 63
+K +GH+ + DVA L +AS D ++KI V ++ + L L GH V+ +
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV--SSGKCLKTLKGHSNYVFCCNF 137
Query: 64 AHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123
+P+ +++ S SFD +V IW + + + +K H V+++ + + G + S
Sbjct: 138 -NPQ-SNLIVSGSFDESVRIW-DVKTGKCLK--TLPAHSDPVSAVHF--NRDGSLIVSSS 190
Query: 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178
DG ++ A G + ID +P V+ V ++P+ G + + LD KL
Sbjct: 191 YDGLCRIWDT-ASGQCLKTLIDDDNPP-VSFVKFSPN---GKYILAATLDNTLKL 240
Score = 99 (39.9 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 32/109 (29%), Positives = 47/109 (43%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
+ SG D +V++W + G C L H+D V V + S I S+S DG
Sbjct: 144 IVSGSFDESVRIWDVKTG----KCLKTLPAHSDPVSAV----HFNRDGSLIVSSSYDGLC 195
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286
IW A Q ++ D PV V +S G + A +N + LW+
Sbjct: 196 RIWDTA--SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 72 (30.4 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 101 HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160
H +V+S+ ++P+ G LA S+D I ++ A DG ++ + H +G++ V+W S
Sbjct: 44 HTKAVSSVKFSPN--GEWLASSSADKLIKIWGAY-DGKFE--KTISGHKLGISDVAW--S 96
Query: 161 TAPGALVGSGFLDPVQKL---CSGGCDNTVK 188
+ LV + D K+ SG C T+K
Sbjct: 97 SDSNLLVSASD-DKTLKIWDVSSGKCLKTLK 126
Score = 61 (26.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 23/65 (35%), Positives = 31/65 (47%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASAS-EDGK 236
+ SG DN V +W L + LQ HTD V A P ++ IASA+ E+ K
Sbjct: 274 IVSGSEDNLVYIWNLQT----KEIVQKLQGHTDVVISTACHPT----ENIIASAALENDK 325
Query: 237 VI-IW 240
I +W
Sbjct: 326 TIKLW 330
Score = 53 (23.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 28/106 (26%), Positives = 43/106 (40%)
Query: 184 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST-IASASEDGKVIIWTV 242
DNT+K+W G C H + + +A N + I S SED V IW +
Sbjct: 235 DNTLKLWDYSKG----KCLKTYTGHKN-EKYCIFA-NFSVTGGKWIVSGSEDNLVYIWNL 288
Query: 243 AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVA--DGNNNVTLWE 286
+ + K L V + T NI+A A + + + LW+
Sbjct: 289 QTK--EIVQK-LQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 127 (49.8 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 39/133 (29%), Positives = 60/133 (45%)
Query: 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFG 69
H+ +V V + G L T D+ +K+ + + + HK V +AW HP
Sbjct: 302 HKSSVMAVEFNKNGNWLLTGGRDHLVKMYDI--RMMKEMRTYRAHKKEVISLAW-HPIHE 358
Query: 70 SILASCSFDGTVIIWK-EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128
+ S DG+++ W +G + +H H ++ S+ W H LG LA GS+D N
Sbjct: 359 GLFVSGGGDGSIVYWMVDGEKEIGLLEHA---HDQAIWSMKW--HPLGHILATGSNDNNT 413
Query: 129 SVFTARADGGWDT 141
F AR G DT
Sbjct: 414 K-FWARNRPG-DT 424
Score = 109 (43.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 29/108 (26%), Positives = 51/108 (47%)
Query: 178 LCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237
L +GG D+ VK++ + + +M + A H V +AW P + + S DG +
Sbjct: 318 LLTGGRDHLVKMYDI-RMMKEMRTYRA---HKKEVISLAWHP---IHEGLFVSGGGDGSI 370
Query: 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLW 285
+ W V +G++ G + H ++ + W G+ILA +NN W
Sbjct: 371 VYWMV--DGEKEIGLLEHAHDQAIWSMKWHPLGHILATGSNDNNTKFW 416
Score = 76 (31.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 28/85 (32%), Positives = 39/85 (45%)
Query: 42 NNTSQHLAKLSGHKG-AVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED 100
N + H+ S HK A+ +A+A A+ S DGT +W E + V
Sbjct: 205 NMNNAHM--FSAHKDEAIRGLAFAPTDVK--FATASDDGTARVWDFARYTE---ERVLRG 257
Query: 101 HKSSVNSIDWAPHELGLCLACGSSD 125
H + V IDW P + GL +A GS D
Sbjct: 258 HGAEVRCIDWHPTK-GL-IATGSRD 280
Score = 63 (27.2 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 16/66 (24%), Positives = 31/66 (46%)
Query: 55 KGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHE 114
K V+ V W+ P+ ++ C G +W N + + + + H S++ ++ WA +E
Sbjct: 133 KCPVYSVCWS-PEGKRLITGCQ-TGEFTLW---NGTAFNFETILQAHDSAIRALKWASNE 187
Query: 115 LGLCLA 120
L A
Sbjct: 188 QWLLSA 193
Score = 55 (24.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 102 KSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWA 158
K V S+ W+P G L G G +++ A ++ I QAH + ++ WA
Sbjct: 133 KCPVYSVCWSPE--GKRLITGCQTGEFTLWNGTA---FNFETILQAHDSAIRALKWA 184
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 90 (36.7 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 30/110 (27%), Positives = 48/110 (43%)
Query: 55 KGAVWEVAWAHPKFGSILASCSFDGTVIIW--KEGNSNEWIKDHVFEDHKSSVNSIDWAP 112
+ +++ W+ + AS S DG++ IW + + IK FE+H V S+DW
Sbjct: 58 RDGLYDCTWSEENECHV-ASSSGDGSIKIWDTQAPSGGRPIKS--FEEHTKEVYSVDWNL 114
Query: 113 HELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTA 162
+ GS D +I ++ R D T R H + S W+P A
Sbjct: 115 VTKDTFIT-GSWDQSIKIWNPRMDRSLKTFR---EHRYCIYSAIWSPRNA 160
Score = 86 (35.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 28/111 (25%), Positives = 53/111 (47%)
Query: 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG 235
+++ +G D T+++W + + L+ HT VR + +P+ +S +AS S D
Sbjct: 204 KEVVTGSVDKTIRIWDIR---YPDRPTTILRGHTYAVRRIKCSPH---SESMLASCSYDM 257
Query: 236 KVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSL-TGNILAVADGNNNVTLW 285
VI+W ARE D ++ H + V + W++ +A + V +W
Sbjct: 258 SVIVWDRAREQDPIIARMDHHTEF-VVGLDWNMFIDGQMASCSWDEQVCVW 307
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 127 (49.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 52/184 (28%), Positives = 88/184 (47%)
Query: 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK 67
TGH+ V+D A K + TAS D ++KI V T + L GH V+ + +P+
Sbjct: 118 TGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVP--TVKMAKTLKGHTNYVFCCNF-NPQ 174
Query: 68 FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127
S++ S SFD +V IW + + +K H V+++ + + G + GS DG
Sbjct: 175 -SSLVVSGSFDESVRIW-DVRTGMCVK--TLPAHSDPVSAVSF--NRDGSLITSGSYDGL 228
Query: 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTV 187
+ ++ A+G + +D +P V V ++P+ G + S LD KL G T+
Sbjct: 229 VRIWDT-ANGQCVKTLVDDENPP-VAFVKFSPN---GKYILSSNLDNTLKLWDFGKGKTL 283
Query: 188 KVWK 191
K ++
Sbjct: 284 KQYQ 287
Score = 46 (21.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 174 PVQKLCSGGC---DNTVKVWK 191
P+Q + + G DNT+++W+
Sbjct: 345 PMQNMIASGALEPDNTIRIWR 365
WARNING: HSPs involving 381 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.437 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 288 288 0.00087 115 3 11 22 0.41 34
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 631
No. of states in DFA: 624 (66 KB)
Total size of DFA: 273 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.00u 0.09s 24.09t Elapsed: 00:00:01
Total cpu time: 24.09u 0.09s 24.18t Elapsed: 00:00:01
Start: Thu May 9 16:25:33 2013 End: Thu May 9 16:25:34 2013
WARNINGS ISSUED: 2