Query 036510
Match_columns 288
No_of_seqs 122 out of 1917
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 03:53:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036510.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036510hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pm7_B Protein transport prote 100.0 3.9E-47 1.3E-51 323.5 35.8 278 6-287 4-283 (297)
2 3bg1_A Protein SEC13 homolog; 100.0 2.4E-47 8.3E-52 327.6 30.8 282 4-287 6-291 (316)
3 2ynn_A Coatomer subunit beta'; 100.0 6.6E-44 2.3E-48 304.5 34.5 254 2-287 4-257 (304)
4 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.7E-42 1.3E-46 298.8 37.8 257 6-287 10-281 (345)
5 4gqb_B Methylosome protein 50; 100.0 9.1E-43 3.1E-47 302.8 33.7 247 9-287 80-329 (344)
6 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.7E-42 1.3E-46 298.8 37.6 259 7-288 57-334 (345)
7 3ow8_A WD repeat-containing pr 100.0 1.4E-42 4.9E-47 298.7 32.8 247 6-287 27-277 (321)
8 1vyh_C Platelet-activating fac 100.0 2.4E-42 8.4E-47 306.8 32.7 251 4-287 101-367 (410)
9 1vyh_C Platelet-activating fac 100.0 3.2E-42 1.1E-46 306.1 33.1 261 5-288 144-410 (410)
10 2hes_X YDR267CP; beta-propelle 100.0 1.4E-41 4.7E-46 293.5 35.7 258 9-288 56-327 (330)
11 3ow8_A WD repeat-containing pr 100.0 7.1E-42 2.4E-46 294.4 33.6 245 6-287 75-319 (321)
12 2pbi_B Guanine nucleotide-bind 100.0 1.6E-41 5.5E-46 296.0 34.5 250 4-286 57-354 (354)
13 2hes_X YDR267CP; beta-propelle 100.0 3.2E-41 1.1E-45 291.2 35.9 258 5-287 8-278 (330)
14 3jrp_A Fusion protein of prote 100.0 3.4E-41 1.2E-45 293.7 35.5 281 3-287 3-285 (379)
15 1got_B GT-beta; complex (GTP-b 100.0 3.5E-41 1.2E-45 292.0 34.8 249 4-287 48-299 (340)
16 3frx_A Guanine nucleotide-bind 100.0 2.2E-41 7.5E-46 290.9 32.4 255 6-287 12-315 (319)
17 4g56_B MGC81050 protein; prote 100.0 2.4E-41 8.1E-46 295.2 29.2 248 8-287 91-341 (357)
18 4gqb_B Methylosome protein 50; 100.0 2.6E-40 8.9E-45 287.3 32.1 251 7-287 26-287 (344)
19 1got_B GT-beta; complex (GTP-b 100.0 1E-39 3.6E-44 282.7 34.5 244 7-286 93-340 (340)
20 3iz6_a 40S ribosomal protein R 100.0 9.5E-41 3.3E-45 293.6 28.3 252 6-287 61-373 (380)
21 2xzm_R RACK1; ribosome, transl 100.0 1.2E-39 4.2E-44 282.5 34.8 258 5-287 15-283 (343)
22 1nr0_A Actin interacting prote 100.0 3.4E-40 1.2E-44 307.2 33.1 250 5-287 53-353 (611)
23 1nr0_A Actin interacting prote 100.0 3.2E-39 1.1E-43 300.6 37.9 266 6-287 142-565 (611)
24 4g56_B MGC81050 protein; prote 100.0 1E-39 3.5E-44 284.9 30.0 252 7-287 38-299 (357)
25 3f3f_A Nucleoporin SEH1; struc 100.0 9.8E-39 3.3E-43 274.0 35.1 272 3-287 3-335 (351)
26 4aow_A Guanine nucleotide-bind 100.0 5.3E-39 1.8E-43 276.3 33.2 253 6-287 33-335 (340)
27 2ynn_A Coatomer subunit beta'; 100.0 5.7E-39 1.9E-43 273.9 31.8 248 7-287 51-300 (304)
28 2xzm_R RACK1; ribosome, transl 100.0 5.8E-39 2E-43 278.3 31.5 250 5-287 70-338 (343)
29 3dwl_C Actin-related protein 2 100.0 3.9E-40 1.3E-44 288.2 23.7 262 1-286 1-278 (377)
30 1erj_A Transcriptional repress 100.0 2.9E-38 9.9E-43 279.0 33.7 247 11-287 123-387 (393)
31 1erj_A Transcriptional repress 100.0 5.8E-38 2E-42 277.0 32.2 248 9-287 62-339 (393)
32 4ery_A WD repeat-containing pr 100.0 8.3E-38 2.8E-42 267.0 32.1 245 6-287 18-266 (312)
33 3jro_A Fusion protein of prote 100.0 1.9E-38 6.4E-43 302.0 30.9 280 4-287 2-283 (753)
34 4ery_A WD repeat-containing pr 100.0 2.6E-37 8.8E-42 263.9 33.3 247 6-287 60-310 (312)
35 2ymu_A WD-40 repeat protein; u 100.0 1.2E-37 4.2E-42 286.8 32.8 239 6-286 339-577 (577)
36 3dm0_A Maltose-binding peripla 100.0 1.4E-37 4.9E-42 293.3 30.7 250 6-287 377-630 (694)
37 4e54_B DNA damage-binding prot 100.0 4.8E-38 1.6E-42 281.1 25.8 212 7-244 115-327 (435)
38 1k8k_C P40, ARP2/3 complex 41 100.0 1.2E-36 4E-41 264.8 33.9 255 6-287 3-272 (372)
39 3dm0_A Maltose-binding peripla 100.0 2.8E-37 9.5E-42 291.4 31.3 249 6-288 425-692 (694)
40 4h5i_A Guanine nucleotide-exch 100.0 5.3E-36 1.8E-40 262.1 32.3 200 58-287 136-341 (365)
41 2ymu_A WD-40 repeat protein; u 100.0 5.5E-36 1.9E-40 275.8 33.2 240 6-287 298-537 (577)
42 3zwl_B Eukaryotic translation 100.0 1.7E-35 5.9E-40 256.5 34.2 251 6-287 27-344 (369)
43 2xyi_A Probable histone-bindin 100.0 1.9E-36 6.4E-41 270.4 28.7 259 7-287 124-408 (430)
44 1gxr_A ESG1, transducin-like e 100.0 2.7E-35 9.3E-40 252.4 34.6 241 9-287 95-335 (337)
45 2j04_B YDR362CP, TAU91; beta p 100.0 2.6E-37 9E-42 282.0 23.1 249 7-287 203-515 (524)
46 4gga_A P55CDC, cell division c 100.0 1.9E-35 6.6E-40 262.9 34.6 245 8-287 144-393 (420)
47 3dwl_C Actin-related protein 2 100.0 2.3E-36 7.8E-41 264.2 27.4 259 5-287 49-377 (377)
48 2pm9_A Protein WEB1, protein t 100.0 1.7E-36 5.8E-41 267.8 26.9 253 8-287 64-335 (416)
49 1k8k_C P40, ARP2/3 complex 41 100.0 1.8E-35 6.2E-40 257.3 32.6 255 6-287 47-359 (372)
50 3k26_A Polycomb protein EED; W 100.0 2.2E-36 7.4E-41 262.1 26.3 253 9-287 67-364 (366)
51 2j04_B YDR362CP, TAU91; beta p 100.0 4.3E-37 1.5E-41 280.6 22.0 234 25-287 175-426 (524)
52 3i2n_A WD repeat-containing pr 100.0 2.4E-35 8.4E-40 254.9 31.4 255 8-288 62-352 (357)
53 4a11_B DNA excision repair pro 100.0 9.6E-35 3.3E-39 255.3 35.3 259 4-287 36-363 (408)
54 4aez_A CDC20, WD repeat-contai 100.0 5.4E-35 1.8E-39 258.4 33.5 243 9-287 132-378 (401)
55 3ei3_B DNA damage-binding prot 100.0 9.6E-36 3.3E-40 261.1 28.4 251 6-287 68-337 (383)
56 3dw8_B Serine/threonine-protei 100.0 7.3E-36 2.5E-40 266.4 28.0 256 9-287 26-371 (447)
57 3vl1_A 26S proteasome regulato 100.0 4.9E-35 1.7E-39 259.2 32.4 258 12-287 98-363 (420)
58 1gxr_A ESG1, transducin-like e 100.0 2.7E-34 9.2E-39 246.2 34.7 244 8-287 48-294 (337)
59 3vl1_A 26S proteasome regulato 100.0 5.4E-35 1.9E-39 258.9 30.1 251 6-288 134-418 (420)
60 3mkq_A Coatomer beta'-subunit; 100.0 4.6E-35 1.6E-39 279.9 31.5 253 1-287 3-257 (814)
61 3k26_A Polycomb protein EED; W 100.0 2.3E-35 7.8E-40 255.7 26.7 256 6-287 13-316 (366)
62 1sq9_A Antiviral protein SKI8; 100.0 2.1E-35 7E-40 259.5 25.5 251 6-287 57-393 (397)
63 1yfq_A Cell cycle arrest prote 100.0 6.6E-35 2.3E-39 251.1 27.9 252 1-287 1-280 (342)
64 3v7d_B Cell division control p 100.0 2.5E-34 8.7E-39 258.2 31.9 245 4-287 114-379 (464)
65 1sq9_A Antiviral protein SKI8; 100.0 1.1E-34 3.9E-39 254.8 28.6 253 5-287 10-320 (397)
66 3odt_A Protein DOA1; ubiquitin 100.0 5.9E-34 2E-38 241.8 31.9 242 4-287 11-253 (313)
67 3sfz_A APAF-1, apoptotic pepti 100.0 3.6E-34 1.2E-38 285.4 35.4 251 6-287 610-911 (1249)
68 3i2n_A WD repeat-containing pr 100.0 1.9E-34 6.6E-39 249.2 29.2 256 6-287 13-289 (357)
69 3ei3_B DNA damage-binding prot 100.0 8.5E-35 2.9E-39 255.1 27.3 247 8-288 115-381 (383)
70 1r5m_A SIR4-interacting protei 100.0 5.8E-34 2E-38 251.4 32.8 247 9-288 106-424 (425)
71 3frx_A Guanine nucleotide-bind 100.0 3.3E-34 1.1E-38 246.1 29.6 215 46-288 8-226 (319)
72 3gre_A Serine/threonine-protei 100.0 6.9E-35 2.4E-39 260.0 26.2 255 8-287 60-357 (437)
73 3bg1_A Protein SEC13 homolog; 100.0 5.8E-35 2E-39 250.5 24.1 225 6-244 52-293 (316)
74 2pm9_A Protein WEB1, protein t 100.0 2.3E-35 7.7E-40 260.6 22.1 253 9-287 10-292 (416)
75 4ggc_A P55CDC, cell division c 100.0 2.3E-33 7.8E-38 238.9 33.4 247 8-287 64-313 (318)
76 4gq1_A NUP37; propeller, trans 100.0 1.7E-35 5.7E-40 261.4 20.5 251 10-286 88-386 (393)
77 3mmy_A MRNA export factor; mRN 100.0 2.6E-33 8.8E-38 242.7 33.6 256 4-287 32-302 (368)
78 1r5m_A SIR4-interacting protei 100.0 1.2E-33 4.1E-38 249.4 32.1 245 9-287 43-359 (425)
79 3v7d_B Cell division control p 100.0 1.2E-33 4.2E-38 253.8 32.5 244 6-288 157-420 (464)
80 2pm7_B Protein transport prote 100.0 1.6E-33 5.5E-38 239.3 31.0 223 5-244 47-285 (297)
81 2aq5_A Coronin-1A; WD40 repeat 100.0 5.8E-34 2E-38 251.7 27.8 250 6-287 76-340 (402)
82 2pbi_B Guanine nucleotide-bind 100.0 7.3E-34 2.5E-38 247.5 27.7 205 7-241 150-354 (354)
83 3odt_A Protein DOA1; ubiquitin 100.0 3.6E-33 1.2E-37 237.0 30.9 239 6-287 54-294 (313)
84 3iz6_a 40S ribosomal protein R 100.0 4E-34 1.4E-38 251.3 22.2 219 45-288 56-279 (380)
85 1p22_A F-BOX/WD-repeat protein 100.0 2.2E-32 7.5E-37 244.2 33.3 233 9-287 131-363 (435)
86 1p22_A F-BOX/WD-repeat protein 100.0 5E-33 1.7E-37 248.4 28.9 239 6-287 168-412 (435)
87 4e54_B DNA damage-binding prot 100.0 7.6E-34 2.6E-38 253.8 22.8 214 48-287 112-325 (435)
88 3sfz_A APAF-1, apoptotic pepti 100.0 7.1E-33 2.4E-37 276.1 31.8 267 6-287 652-1032(1249)
89 4aez_A CDC20, WD repeat-contai 100.0 1.7E-32 5.7E-37 242.4 30.1 241 9-287 89-334 (401)
90 3gre_A Serine/threonine-protei 100.0 1.9E-33 6.6E-38 250.6 24.1 252 9-286 109-437 (437)
91 2aq5_A Coronin-1A; WD40 repeat 100.0 1.4E-32 4.8E-37 242.8 28.4 244 16-287 39-297 (402)
92 1pgu_A Actin interacting prote 100.0 4.4E-32 1.5E-36 250.8 30.4 248 8-287 15-281 (615)
93 3dw8_B Serine/threonine-protei 100.0 9.5E-33 3.3E-37 246.2 24.2 248 12-287 94-444 (447)
94 3lrv_A PRE-mRNA-splicing facto 100.0 1.3E-32 4.3E-37 238.3 22.4 235 19-287 44-290 (343)
95 2oaj_A Protein SNI1; WD40 repe 100.0 4.4E-32 1.5E-36 262.4 28.3 161 106-287 439-659 (902)
96 4aow_A Guanine nucleotide-bind 100.0 3.8E-31 1.3E-35 227.2 30.6 217 43-287 26-244 (340)
97 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.2E-31 1.8E-35 235.8 31.9 236 4-287 111-346 (445)
98 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.8E-31 6.1E-36 239.4 28.7 243 11-287 4-337 (450)
99 3vu4_A KMHSV2; beta-propeller 100.0 2.7E-31 9.1E-36 231.4 28.8 247 7-287 15-334 (355)
100 1pgu_A Actin interacting prote 100.0 3.4E-31 1.2E-35 244.9 31.1 246 4-287 56-326 (615)
101 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.1E-30 3.6E-35 233.7 32.5 233 6-287 154-389 (445)
102 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.1E-30 3.6E-35 234.3 32.5 252 8-287 99-389 (450)
103 4h5i_A Guanine nucleotide-exch 100.0 1.6E-31 5.6E-36 233.7 26.0 205 9-244 131-343 (365)
104 3mkq_A Coatomer beta'-subunit; 100.0 3.3E-31 1.1E-35 253.2 30.4 248 6-287 50-300 (814)
105 2oaj_A Protein SNI1; WD40 repe 100.0 2E-31 6.7E-36 257.8 28.9 243 8-286 14-309 (902)
106 4gga_A P55CDC, cell division c 100.0 1.9E-30 6.5E-35 230.7 32.9 240 14-287 108-351 (420)
107 3jrp_A Fusion protein of prote 100.0 6.7E-31 2.3E-35 228.6 28.5 222 46-287 2-238 (379)
108 1yfq_A Cell cycle arrest prote 100.0 2.2E-31 7.6E-36 229.0 23.7 238 6-281 51-315 (342)
109 2j04_A TAU60, YPL007P, hypothe 100.0 1.1E-31 3.7E-36 242.0 22.2 237 11-287 15-295 (588)
110 4ggc_A P55CDC, cell division c 100.0 1.1E-29 3.7E-34 216.1 31.5 242 14-287 28-271 (318)
111 2j04_A TAU60, YPL007P, hypothe 100.0 2E-30 6.8E-35 233.8 25.7 233 9-278 83-350 (588)
112 3mmy_A MRNA export factor; mRN 100.0 2.3E-30 7.9E-35 224.1 24.5 251 6-286 81-343 (368)
113 2w18_A PALB2, fancn, partner a 100.0 2.1E-29 7.3E-34 214.4 27.2 246 25-288 56-356 (356)
114 3f3f_A Nucleoporin SEH1; struc 100.0 5E-29 1.7E-33 213.4 30.0 224 7-245 53-338 (351)
115 4a11_B DNA excision repair pro 100.0 3E-29 1E-33 220.2 29.2 248 8-286 96-402 (408)
116 3lrv_A PRE-mRNA-splicing facto 100.0 1.2E-29 4.2E-34 219.5 25.1 238 12-286 77-330 (343)
117 3jro_A Fusion protein of prote 100.0 9.2E-30 3.2E-34 242.2 25.8 223 6-244 48-285 (753)
118 2xyi_A Probable histone-bindin 100.0 2.4E-29 8.2E-34 224.4 25.9 219 6-244 176-410 (430)
119 3zwl_B Eukaryotic translation 100.0 4.5E-28 1.5E-32 209.8 30.2 211 46-287 23-247 (369)
120 2w18_A PALB2, fancn, partner a 100.0 3.4E-29 1.2E-33 213.2 21.0 202 11-242 111-355 (356)
121 3bws_A Protein LP49; two-domai 100.0 1.4E-26 4.6E-31 205.8 29.3 242 7-288 165-431 (433)
122 4gq1_A NUP37; propeller, trans 100.0 6.9E-28 2.4E-32 212.6 18.5 221 5-242 130-387 (393)
123 1l0q_A Surface layer protein; 100.0 3.1E-25 1.1E-29 194.4 32.4 238 9-287 30-273 (391)
124 3vu4_A KMHSV2; beta-propeller 100.0 1.3E-26 4.6E-31 201.7 23.4 221 46-287 10-269 (355)
125 3bws_A Protein LP49; two-domai 100.0 3E-26 1E-30 203.6 25.5 238 12-287 123-388 (433)
126 1l0q_A Surface layer protein; 99.9 8.6E-25 3E-29 191.6 29.3 224 24-287 3-231 (391)
127 3hfq_A Uncharacterized protein 99.9 1E-22 3.5E-27 175.9 32.3 256 10-287 38-315 (347)
128 1ri6_A Putative isomerase YBHE 99.9 6.3E-23 2.2E-27 175.9 30.2 255 9-286 35-305 (343)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 6.1E-24 2.1E-28 188.7 24.0 222 23-287 143-385 (415)
130 1nir_A Nitrite reductase; hemo 99.9 1.6E-22 5.5E-27 185.4 29.8 245 14-288 181-457 (543)
131 2ojh_A Uncharacterized protein 99.9 2.1E-22 7.2E-27 168.5 23.3 241 7-280 37-293 (297)
132 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.3E-21 4.3E-26 173.8 27.8 223 6-271 173-410 (415)
133 2oit_A Nucleoporin 214KDA; NH2 99.9 6.3E-22 2.2E-26 176.7 23.9 249 11-285 36-329 (434)
134 3scy_A Hypothetical bacterial 99.9 1.3E-19 4.5E-24 157.2 34.9 254 10-287 48-335 (361)
135 3u4y_A Uncharacterized protein 99.9 1.9E-20 6.4E-25 160.3 27.0 250 10-288 39-303 (331)
136 2ecf_A Dipeptidyl peptidase IV 99.9 1.5E-21 5.1E-26 184.9 21.8 239 11-287 36-365 (741)
137 2ojh_A Uncharacterized protein 99.9 2.5E-20 8.6E-25 155.8 26.3 223 28-287 17-256 (297)
138 1nir_A Nitrite reductase; hemo 99.9 1.3E-20 4.4E-25 172.8 26.1 255 10-288 220-513 (543)
139 1ri6_A Putative isomerase YBHE 99.9 1.4E-19 4.7E-24 155.0 30.8 237 25-287 7-260 (343)
140 2oit_A Nucleoporin 214KDA; NH2 99.9 1.6E-21 5.6E-26 174.1 17.9 202 55-287 36-276 (434)
141 3o4h_A Acylamino-acid-releasin 99.9 2.6E-21 9.1E-26 178.6 18.0 234 10-287 20-274 (582)
142 2ecf_A Dipeptidyl peptidase IV 99.9 1.4E-20 4.7E-25 178.3 21.5 239 13-287 110-411 (741)
143 1xfd_A DIP, dipeptidyl aminope 99.9 6.2E-21 2.1E-25 180.1 17.8 242 12-286 17-341 (723)
144 3u4y_A Uncharacterized protein 99.9 1.1E-18 3.7E-23 149.3 29.2 239 18-287 4-250 (331)
145 3vgz_A Uncharacterized protein 99.8 1.4E-18 4.9E-23 149.5 28.1 244 10-287 39-301 (353)
146 2z3z_A Dipeptidyl aminopeptida 99.8 2.8E-19 9.7E-24 168.5 25.3 246 9-287 118-433 (706)
147 1xfd_A DIP, dipeptidyl aminope 99.8 1.7E-19 5.9E-24 170.2 23.4 252 6-287 52-391 (723)
148 1jof_A Carboxy-CIS,CIS-muconat 99.8 3.3E-18 1.1E-22 149.1 28.9 251 12-287 40-339 (365)
149 1k32_A Tricorn protease; prote 99.8 1.7E-19 5.9E-24 177.2 22.6 235 8-287 242-500 (1045)
150 1jmx_B Amine dehydrogenase; ox 99.8 4.3E-19 1.5E-23 152.4 22.4 235 16-287 4-323 (349)
151 3hfq_A Uncharacterized protein 99.8 9.5E-18 3.3E-22 144.6 30.9 232 31-287 14-269 (347)
152 2z3z_A Dipeptidyl aminopeptida 99.8 4.6E-19 1.6E-23 167.1 23.6 233 12-280 82-377 (706)
153 3vgz_A Uncharacterized protein 99.8 9.5E-18 3.3E-22 144.3 25.9 233 12-279 89-334 (353)
154 1pby_B Quinohemoprotein amine 99.8 6.5E-18 2.2E-22 144.1 24.6 225 24-287 2-308 (337)
155 1k32_A Tricorn protease; prote 99.8 5.7E-18 2E-22 166.4 25.9 241 7-288 332-636 (1045)
156 3o4h_A Acylamino-acid-releasin 99.8 3.7E-18 1.2E-22 157.6 19.9 230 9-286 62-312 (582)
157 1z68_A Fibroblast activation p 99.8 3.7E-18 1.3E-22 161.2 19.3 235 16-285 20-340 (719)
158 3scy_A Hypothetical bacterial 99.8 1.1E-15 3.8E-20 132.4 30.1 241 22-287 12-289 (361)
159 4a5s_A Dipeptidyl peptidase 4 99.8 3.1E-17 1E-21 155.8 21.2 256 12-286 17-350 (740)
160 1z68_A Fibroblast activation p 99.8 1.7E-17 6E-22 156.6 17.4 238 13-287 61-389 (719)
161 1q7f_A NHL, brain tumor CG1071 99.7 5.4E-15 1.9E-19 123.9 29.3 239 9-287 27-278 (286)
162 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.2E-14 4E-19 126.5 30.6 236 25-287 4-289 (365)
163 3fvz_A Peptidyl-glycine alpha- 99.7 5.6E-15 1.9E-19 126.8 26.4 247 11-287 23-320 (329)
164 3pe7_A Oligogalacturonate lyas 99.7 2.1E-15 7.3E-20 131.5 21.6 241 7-287 26-327 (388)
165 3pe7_A Oligogalacturonate lyas 99.7 5.2E-16 1.8E-20 135.4 17.2 246 6-287 75-380 (388)
166 3azo_A Aminopeptidase; POP fam 99.7 6.4E-15 2.2E-19 137.7 20.9 248 7-286 19-320 (662)
167 3azo_A Aminopeptidase; POP fam 99.7 1.8E-14 6.2E-19 134.6 23.4 238 16-286 81-364 (662)
168 1pby_B Quinohemoprotein amine 99.7 1.3E-14 4.6E-19 123.5 20.2 205 13-245 35-311 (337)
169 3e5z_A Putative gluconolactona 99.6 2.2E-13 7.6E-18 114.7 25.7 236 9-284 25-282 (296)
170 2xdw_A Prolyl endopeptidase; a 99.6 1.4E-13 4.9E-18 129.9 27.2 251 6-287 119-412 (710)
171 2gop_A Trilobed protease; beta 99.6 1.1E-12 3.7E-17 112.6 28.1 221 13-287 60-329 (347)
172 1jmx_B Amine dehydrogenase; ox 99.6 6.8E-14 2.3E-18 119.8 19.1 209 13-244 44-325 (349)
173 4a5s_A Dipeptidyl peptidase 4 99.6 2.3E-13 8E-18 129.1 24.6 239 15-286 65-395 (740)
174 2bkl_A Prolyl endopeptidase; m 99.6 1.1E-13 3.9E-18 130.3 21.4 245 7-287 116-395 (695)
175 2dg1_A DRP35, lactonase; beta 99.6 4.5E-12 1.6E-16 108.2 29.2 237 9-280 42-301 (333)
176 2dg1_A DRP35, lactonase; beta 99.6 4E-13 1.4E-17 114.9 22.0 243 12-287 6-261 (333)
177 3c5m_A Oligogalacturonate lyas 99.6 3.4E-14 1.2E-18 123.9 14.0 231 14-287 38-327 (396)
178 3c5m_A Oligogalacturonate lyas 99.6 5.2E-14 1.8E-18 122.7 15.1 230 16-286 85-379 (396)
179 1rwi_B Serine/threonine-protei 99.5 3.2E-12 1.1E-16 105.7 23.9 236 13-287 25-262 (270)
180 2gop_A Trilobed protease; beta 99.5 1.4E-11 4.7E-16 105.7 24.0 219 11-287 14-289 (347)
181 2oiz_A Aromatic amine dehydrog 99.5 2.2E-11 7.5E-16 105.8 25.1 243 16-288 54-333 (361)
182 1yr2_A Prolyl oligopeptidase; 99.5 1.3E-11 4.6E-16 117.0 25.6 247 6-287 157-439 (741)
183 3fvz_A Peptidyl-glycine alpha- 99.5 1.5E-11 5E-16 105.4 23.5 214 10-244 89-322 (329)
184 2z2n_A Virginiamycin B lyase; 99.5 5.4E-10 1.9E-14 93.3 30.8 241 9-286 12-252 (299)
185 1q7f_A NHL, brain tumor CG1071 99.4 9.6E-11 3.3E-15 97.8 25.0 197 9-243 74-279 (286)
186 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 6E-10 2E-14 93.9 29.3 245 12-287 18-297 (314)
187 2bkl_A Prolyl endopeptidase; m 99.4 3.1E-11 1.1E-15 113.7 22.1 233 20-286 76-346 (695)
188 3no2_A Uncharacterized protein 99.4 1.3E-10 4.4E-15 97.2 22.8 217 22-276 4-230 (276)
189 1xip_A Nucleoporin NUP159; bet 99.4 2E-11 7E-16 106.4 18.2 176 13-230 39-230 (388)
190 2xdw_A Prolyl endopeptidase; a 99.4 1.2E-10 4.2E-15 109.9 24.2 234 21-285 81-362 (710)
191 1qks_A Cytochrome CD1 nitrite 99.4 2.3E-09 7.8E-14 98.4 31.6 249 13-287 198-475 (567)
192 3e5z_A Putative gluconolactona 99.4 1.5E-10 5.2E-15 97.2 21.4 207 47-287 19-244 (296)
193 2z2n_A Virginiamycin B lyase; 99.3 8.5E-09 2.9E-13 85.9 30.9 238 10-286 55-292 (299)
194 3dsm_A Uncharacterized protein 99.3 8.8E-10 3E-14 94.3 24.9 234 13-287 45-300 (328)
195 2oiz_A Aromatic amine dehydrog 99.3 4.7E-10 1.6E-14 97.4 22.8 225 13-271 109-360 (361)
196 2qc5_A Streptogramin B lactona 99.3 1.5E-08 5.2E-13 84.4 30.7 240 10-286 18-257 (300)
197 3hrp_A Uncharacterized protein 99.3 3.6E-09 1.2E-13 93.3 28.0 241 12-288 131-409 (409)
198 3g4e_A Regucalcin; six bladed 99.3 2.1E-08 7.2E-13 84.3 29.0 240 5-278 6-261 (297)
199 3iuj_A Prolyl endopeptidase; h 99.3 4.4E-10 1.5E-14 105.8 20.4 247 5-287 122-403 (693)
200 1xip_A Nucleoporin NUP159; bet 99.3 1.6E-10 5.3E-15 100.8 15.6 175 57-275 39-230 (388)
201 1qks_A Cytochrome CD1 nitrite 99.2 1.3E-08 4.6E-13 93.3 27.5 236 20-287 164-419 (567)
202 1rwi_B Serine/threonine-protei 99.2 2.9E-09 9.8E-14 87.8 19.9 197 12-244 67-264 (270)
203 1yr2_A Prolyl oligopeptidase; 99.2 5.7E-09 2E-13 98.9 24.3 235 20-286 115-390 (741)
204 3dr2_A Exported gluconolactona 99.2 2E-08 6.9E-13 84.7 24.4 232 11-284 44-302 (305)
205 2qc5_A Streptogramin B lactona 99.2 1.4E-07 5E-12 78.4 29.3 237 11-286 61-297 (300)
206 3no2_A Uncharacterized protein 99.2 2.4E-09 8.1E-14 89.4 17.9 184 69-286 5-192 (276)
207 3dsm_A Uncharacterized protein 99.1 1.3E-08 4.4E-13 87.0 21.5 215 31-287 15-251 (328)
208 2ghs_A AGR_C_1268P; regucalcin 99.1 2.3E-07 7.8E-12 79.1 29.2 230 14-279 51-292 (326)
209 2mad_H Methylamine dehydrogena 99.1 3.1E-07 1.1E-11 79.9 29.8 236 16-288 70-349 (373)
210 2qe8_A Uncharacterized protein 99.1 2.8E-08 9.5E-13 85.4 22.0 234 12-279 17-311 (343)
211 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 3E-08 1E-12 83.4 20.6 203 10-244 69-299 (314)
212 3g4e_A Regucalcin; six bladed 99.0 1.6E-07 5.3E-12 78.9 22.8 194 11-233 53-262 (297)
213 3hrp_A Uncharacterized protein 98.9 5.1E-07 1.8E-11 79.5 24.6 198 56-286 131-351 (409)
214 3sjl_D Methylamine dehydrogena 98.9 7.2E-07 2.5E-11 77.5 22.1 239 16-288 82-362 (386)
215 2ece_A 462AA long hypothetical 98.8 2.2E-06 7.6E-11 75.4 23.3 229 21-277 93-399 (462)
216 3iuj_A Prolyl endopeptidase; h 98.8 2.5E-07 8.7E-12 87.0 18.2 203 53-287 126-357 (693)
217 3c75_H MADH, methylamine dehyd 98.8 9.2E-07 3.1E-11 78.0 20.6 237 16-288 122-401 (426)
218 2ghs_A AGR_C_1268P; regucalcin 98.8 5.2E-06 1.8E-10 70.6 23.5 193 11-234 89-293 (326)
219 2hz6_A Endoplasmic reticulum t 98.7 1.6E-08 5.5E-13 87.9 6.0 179 69-287 9-190 (369)
220 2hz6_A Endoplasmic reticulum t 98.7 1.2E-08 4.2E-13 88.7 4.9 207 22-272 8-217 (369)
221 2mad_H Methylamine dehydrogena 98.7 7E-05 2.4E-09 65.0 28.6 231 19-287 28-305 (373)
222 3dr2_A Exported gluconolactona 98.7 2.8E-06 9.4E-11 71.5 18.6 201 48-286 37-264 (305)
223 2qe8_A Uncharacterized protein 98.6 7.9E-06 2.7E-10 69.9 19.0 202 56-287 17-276 (343)
224 1mda_H Methylamine dehydrogena 98.6 1.1E-05 3.7E-10 69.9 19.6 241 24-288 33-345 (368)
225 3sjl_D Methylamine dehydrogena 98.3 0.00016 5.4E-09 62.8 21.7 233 18-287 39-318 (386)
226 2ece_A 462AA long hypothetical 98.2 0.00014 4.7E-09 64.1 18.9 191 70-287 97-350 (462)
227 2iwa_A Glutamine cyclotransfer 98.2 0.00074 2.5E-08 55.5 22.0 201 13-245 22-238 (266)
228 3c75_H MADH, methylamine dehyd 98.2 0.00041 1.4E-08 61.1 20.8 231 21-287 82-357 (426)
229 3nol_A Glutamine cyclotransfer 98.1 0.0014 4.9E-08 53.4 20.9 193 48-278 34-244 (262)
230 1k3i_A Galactose oxidase precu 98.0 0.00031 1.1E-08 65.5 18.1 115 16-136 190-324 (656)
231 1kb0_A Quinohemoprotein alcoho 98.0 0.0005 1.7E-08 64.4 19.2 49 235-287 457-505 (677)
232 1mda_H Methylamine dehydrogena 98.0 0.00021 7.1E-09 61.8 15.4 69 16-88 69-158 (368)
233 1yiq_A Quinohemoprotein alcoho 98.0 0.00064 2.2E-08 63.8 19.1 50 234-287 454-503 (689)
234 2xe4_A Oligopeptidase B; hydro 98.0 0.0019 6.6E-08 61.2 22.5 119 9-136 170-305 (751)
235 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.0025 8.7E-08 54.6 21.3 179 70-286 189-375 (376)
236 3hxj_A Pyrrolo-quinoline quino 97.9 0.0011 3.6E-08 55.6 18.1 215 23-286 107-321 (330)
237 3nol_A Glutamine cyclotransfer 97.9 0.0023 7.9E-08 52.2 18.4 189 12-233 43-245 (262)
238 1npe_A Nidogen, entactin; glyc 97.9 0.0069 2.4E-07 49.3 28.1 229 24-287 2-236 (267)
239 1yiq_A Quinohemoprotein alcoho 97.9 0.0021 7.2E-08 60.3 20.4 84 184-278 454-538 (689)
240 3nok_A Glutaminyl cyclase; bet 97.8 0.002 7E-08 52.6 17.5 192 48-278 46-254 (268)
241 2p4o_A Hypothetical protein; p 97.8 0.012 4E-07 49.1 26.1 229 12-279 32-278 (306)
242 2fp8_A Strictosidine synthase; 97.8 0.013 4.3E-07 49.2 23.2 239 13-287 20-311 (322)
243 1fwx_A Nitrous oxide reductase 97.8 0.0016 5.3E-08 59.4 17.2 227 22-278 100-407 (595)
244 3mbr_X Glutamine cyclotransfer 97.7 0.012 4E-07 47.5 20.2 194 47-278 11-223 (243)
245 3q7m_A Lipoprotein YFGL, BAMB; 97.7 0.018 6E-07 49.3 25.6 225 23-287 53-294 (376)
246 2xe4_A Oligopeptidase B; hydro 97.7 0.0047 1.6E-07 58.5 20.3 197 57-285 175-394 (751)
247 1kb0_A Quinohemoprotein alcoho 97.7 0.004 1.4E-07 58.3 19.4 80 185-275 457-536 (677)
248 1k3i_A Galactose oxidase precu 97.7 0.0016 5.5E-08 60.7 16.6 76 14-93 245-327 (656)
249 1npe_A Nidogen, entactin; glyc 97.7 0.016 5.5E-07 47.0 26.5 224 12-271 36-263 (267)
250 3nok_A Glutaminyl cyclase; bet 97.7 0.017 5.7E-07 47.2 20.9 188 12-232 55-254 (268)
251 3hxj_A Pyrrolo-quinoline quino 97.6 0.0016 5.4E-08 54.5 13.6 221 13-286 61-281 (330)
252 2iwa_A Glutamine cyclotransfer 97.6 0.023 7.9E-07 46.5 24.1 203 47-286 11-234 (266)
253 3mbr_X Glutamine cyclotransfer 97.5 0.026 8.9E-07 45.5 19.8 192 9-233 16-224 (243)
254 3qqz_A Putative uncharacterize 97.4 0.034 1.2E-06 45.2 25.5 211 50-286 21-250 (255)
255 2p4o_A Hypothetical protein; p 97.3 0.056 1.9E-06 44.9 25.7 209 46-286 23-239 (306)
256 3tc9_A Hypothetical hydrolase; 97.3 0.084 2.9E-06 46.4 25.1 157 13-194 138-301 (430)
257 1fwx_A Nitrous oxide reductase 97.0 0.065 2.2E-06 48.8 18.5 96 185-287 254-359 (595)
258 1kv9_A Type II quinohemoprotei 97.0 0.036 1.2E-06 51.7 17.3 51 233-287 436-486 (668)
259 2fp8_A Strictosidine synthase; 97.0 0.12 4E-06 43.2 21.5 200 13-244 81-313 (322)
260 3v65_B Low-density lipoprotein 96.9 0.18 6.3E-06 43.5 26.2 219 33-286 96-315 (386)
261 2xbg_A YCF48-like protein; pho 96.9 0.16 5.6E-06 42.6 26.8 234 11-286 79-319 (327)
262 3v9f_A Two-component system se 96.8 0.28 9.7E-06 46.4 22.1 239 11-286 312-565 (781)
263 2xbg_A YCF48-like protein; pho 96.8 0.2 6.9E-06 42.0 27.5 233 11-283 35-273 (327)
264 4a2l_A BT_4663, two-component 96.7 0.43 1.5E-05 45.2 27.6 238 11-286 309-568 (795)
265 3v64_C Agrin; beta propeller, 96.7 0.25 8.5E-06 42.0 28.7 236 14-286 36-272 (349)
266 4a2l_A BT_4663, two-component 96.7 0.46 1.6E-05 45.0 29.4 226 11-276 356-603 (795)
267 4hw6_A Hypothetical protein, I 96.5 0.36 1.2E-05 42.4 25.4 243 13-288 140-432 (433)
268 2ad6_A Methanol dehydrogenase 96.5 0.26 8.8E-06 45.0 18.5 50 234-287 443-492 (571)
269 3v65_B Low-density lipoprotein 96.5 0.36 1.2E-05 41.6 21.3 180 76-286 93-274 (386)
270 3qqz_A Putative uncharacterize 96.3 0.36 1.2E-05 39.1 25.3 204 8-240 23-249 (255)
271 3pbp_A Nucleoporin NUP82; beta 96.3 0.34 1.2E-05 42.3 16.6 117 151-283 67-206 (452)
272 3sre_A PON1, serum paraoxonase 95.9 0.72 2.5E-05 39.3 24.1 178 77-277 81-285 (355)
273 2vpj_A Kelch-like protein 12; 95.8 0.64 2.2E-05 38.0 21.0 227 22-287 14-276 (301)
274 1kv9_A Type II quinohemoprotei 95.7 0.36 1.2E-05 45.0 15.8 62 69-137 66-138 (668)
275 1ijq_A LDL receptor, low-densi 95.7 0.74 2.5E-05 38.3 23.8 181 79-287 10-193 (316)
276 2xn4_A Kelch-like protein 2; s 95.6 0.79 2.7E-05 37.5 20.4 227 23-287 16-274 (302)
277 3v64_C Agrin; beta propeller, 95.4 1 3.5E-05 38.1 23.6 179 77-286 51-231 (349)
278 2p9w_A MAL S 1 allergenic prot 95.4 0.54 1.9E-05 39.6 14.1 157 104-287 14-213 (334)
279 3kya_A Putative phosphatase; s 95.3 1.5 5.2E-05 39.1 26.1 161 13-194 140-341 (496)
280 3m0c_C LDL receptor, low-densi 94.8 2.8 9.6E-05 39.8 23.6 183 76-286 401-586 (791)
281 3kya_A Putative phosphatase; s 94.8 1.6 5.4E-05 39.0 16.1 158 105-286 141-338 (496)
282 3ii7_A Kelch-like protein 7; p 94.7 1.5 5E-05 35.9 21.5 105 23-136 12-128 (306)
283 3sre_A PON1, serum paraoxonase 94.6 1.9 6.5E-05 36.7 21.9 103 177-287 129-250 (355)
284 3pbp_A Nucleoporin NUP82; beta 94.5 1.2 4.1E-05 38.9 13.9 117 13-130 67-207 (452)
285 4hw6_A Hypothetical protein, I 94.4 2.4 8.1E-05 37.1 21.2 201 58-286 141-371 (433)
286 2xn4_A Kelch-like protein 2; s 94.3 1.8 6.2E-05 35.3 17.7 189 22-244 61-276 (302)
287 3ii7_A Kelch-like protein 7; p 94.2 1.9 6.5E-05 35.3 18.4 189 22-244 55-272 (306)
288 3v9f_A Two-component system se 94.2 3.8 0.00013 38.6 28.3 240 11-286 257-521 (781)
289 1n7d_A LDL receptor, low-densi 94.1 0.44 1.5E-05 44.6 11.5 199 14-242 408-612 (699)
290 2ad6_A Methanol dehydrogenase 94.1 3.4 0.00011 37.6 19.0 49 226-276 476-524 (571)
291 2p9w_A MAL S 1 allergenic prot 94.1 1.6 5.6E-05 36.7 13.7 117 13-135 64-215 (334)
292 1n7d_A LDL receptor, low-densi 93.8 0.42 1.4E-05 44.8 10.7 199 57-286 407-611 (699)
293 2g8s_A Glucose/sorbosone dehyd 93.8 2.7 9.4E-05 35.5 22.4 76 211-287 272-350 (353)
294 1zgk_A Kelch-like ECH-associat 93.7 2.4 8.2E-05 34.8 19.8 227 21-287 23-285 (308)
295 2vpj_A Kelch-like protein 12; 93.5 2.6 8.8E-05 34.3 19.7 106 22-136 62-185 (301)
296 2ism_A Putative oxidoreductase 93.5 3.1 0.00011 35.1 27.1 98 14-114 33-146 (352)
297 1ijq_A LDL receptor, low-densi 93.1 3.3 0.00011 34.3 27.7 220 33-286 10-235 (316)
298 1w6s_A Methanol dehydrogenase 92.9 5.5 0.00019 36.5 19.3 60 26-90 124-193 (599)
299 3amr_A 3-phytase; beta-propell 92.6 4.3 0.00015 34.4 25.1 203 61-287 30-261 (355)
300 1zgk_A Kelch-like ECH-associat 92.6 3.7 0.00013 33.6 16.4 106 22-136 70-194 (308)
301 3tc9_A Hypothetical hydrolase; 92.4 5.1 0.00017 34.9 21.2 160 58-244 139-301 (430)
302 3amr_A 3-phytase; beta-propell 92.3 4.7 0.00016 34.2 23.0 200 22-243 39-262 (355)
303 1flg_A Protein (quinoprotein e 91.9 7.2 0.00025 35.5 21.3 50 234-287 465-514 (582)
304 3a9g_A Putative uncharacterize 91.8 5.4 0.00018 33.7 25.7 99 13-114 30-146 (354)
305 3sov_A LRP-6, low-density lipo 91.6 5.2 0.00018 33.2 20.8 180 78-286 12-194 (318)
306 1flg_A Protein (quinoprotein e 91.5 7.9 0.00027 35.2 18.1 21 70-90 337-357 (582)
307 2uvk_A YJHT; unknown function, 91.3 5.7 0.0002 33.1 15.5 53 22-78 65-128 (357)
308 3m0c_C LDL receptor, low-densi 91.1 11 0.00036 35.9 27.0 162 12-194 424-589 (791)
309 3p5b_L Low density lipoprotein 89.1 10 0.00034 32.6 27.5 229 25-286 85-317 (400)
310 4asc_A Kelch repeat and BTB do 88.8 8.6 0.00029 31.4 15.0 106 22-136 98-222 (315)
311 3das_A Putative oxidoreductase 88.6 10 0.00035 32.0 27.3 75 13-87 33-115 (347)
312 4asc_A Kelch repeat and BTB do 88.3 9.4 0.00032 31.2 18.2 63 69-136 99-175 (315)
313 1w6s_A Methanol dehydrogenase 88.2 15 0.00052 33.5 17.0 65 70-137 63-142 (599)
314 3p5b_L Low density lipoprotein 87.3 13 0.00045 31.8 28.9 203 12-242 112-318 (400)
315 2ism_A Putative oxidoreductase 87.2 8.9 0.00031 32.2 11.9 106 152-276 33-152 (352)
316 4a0p_A LRP6, LRP-6, low-densit 84.5 24 0.00083 32.3 27.3 220 31-286 13-234 (628)
317 2zwa_A Leucine carboxyl methyl 84.4 26 0.00089 32.5 14.7 111 22-137 451-579 (695)
318 1cru_A Protein (soluble quinop 83.2 23 0.00079 31.0 19.9 55 103-160 27-87 (454)
319 3sov_A LRP-6, low-density lipo 82.4 20 0.00067 29.6 25.5 223 32-286 12-235 (318)
320 2woz_A Kelch repeat and BTB do 82.2 19 0.00065 29.3 16.0 109 22-140 109-235 (318)
321 2woz_A Kelch repeat and BTB do 80.1 22 0.00077 28.9 18.1 63 69-136 110-185 (318)
322 1cru_A Protein (soluble quinop 79.3 32 0.0011 30.1 13.7 109 13-122 28-162 (454)
323 2zwa_A Leucine carboxyl methyl 79.2 40 0.0014 31.2 20.9 113 21-140 396-526 (695)
324 2uvk_A YJHT; unknown function, 77.1 30 0.001 28.6 18.3 95 22-125 19-128 (357)
325 1tl2_A L10, protein (tachylect 72.7 29 0.00099 27.4 9.1 62 213-282 91-156 (236)
326 3ei3_A DNA damage-binding prot 69.7 92 0.0032 30.9 27.5 223 33-285 807-1058(1158)
327 4a0p_A LRP6, LRP-6, low-densit 65.8 81 0.0028 28.8 23.9 181 76-286 12-194 (628)
328 3sbq_A Nitrous-oxide reductase 55.8 38 0.0013 30.8 7.6 71 14-87 325-407 (638)
329 2wg3_C Hedgehog-interacting pr 55.6 1E+02 0.0035 27.0 10.5 18 261-278 141-158 (463)
330 3b7f_A Glycosyl hydrolase, BNR 54.3 96 0.0033 26.0 24.0 19 12-30 55-75 (394)
331 1tl2_A L10, protein (tachylect 51.5 87 0.003 24.7 17.2 179 69-280 4-201 (236)
332 3s94_A LRP-6, low-density lipo 50.2 1.5E+02 0.0051 27.0 22.4 228 12-271 40-268 (619)
333 2g8s_A Glucose/sorbosone dehyd 49.6 1.1E+02 0.0038 25.3 15.9 27 104-133 19-46 (353)
334 3das_A Putative oxidoreductase 47.4 1.2E+02 0.0043 25.3 14.7 82 50-134 26-115 (347)
335 4gq2_M Nucleoporin NUP120; bet 45.5 2E+02 0.007 27.7 11.6 29 260-288 237-265 (950)
336 2be1_A Serine/threonine-protei 40.4 97 0.0033 25.9 7.5 110 24-137 11-132 (339)
337 2wg3_C Hedgehog-interacting pr 35.9 2.2E+02 0.0075 24.8 12.9 62 15-76 17-91 (463)
338 4gq2_M Nucleoporin NUP120; bet 33.2 73 0.0025 30.9 6.3 37 13-51 237-273 (950)
339 1sqj_A OXG-RCBH, oligoxylogluc 31.2 3.3E+02 0.011 25.5 16.7 148 11-161 14-180 (789)
340 2be1_A Serine/threonine-protei 26.3 2.4E+02 0.0081 23.5 7.6 117 69-196 10-132 (339)
341 3f7f_A Nucleoporin NUP120; nuc 25.0 2.1E+02 0.0072 26.8 7.5 37 12-52 222-258 (729)
342 4fhn_B Nucleoporin NUP120; pro 22.9 78 0.0027 31.3 4.6 36 14-51 240-275 (1139)
343 3zwu_A Alkaline phosphatase PH 21.1 4.2E+02 0.014 24.0 8.7 57 15-73 479-546 (592)
344 4fhn_B Nucleoporin NUP120; pro 20.1 57 0.0019 32.3 2.9 29 260-288 239-267 (1139)
No 1
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.9e-47 Score=323.49 Aligned_cols=278 Identities=47% Similarity=0.836 Sum_probs=220.1
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
++.+|++.|.+++|+|+|++|++|+.|++|+||++.....+.+.++.+|.+.|++++|+++.++++|+|||.|++|++||
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 46799999999999999999999999999999999654456788999999999999998654578999999999999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCc
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGA 165 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~ 165 (288)
+.++. +.....+..|...|.+++|+|+..+.++++|+.|++|++||++...... .....+|...|.++.|+|+.....
T Consensus 84 ~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~-~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 84 EENGR-WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp BSSSC-BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC-CEEEECCSSCEEEEEECCCC----
T ss_pred cCCCc-eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee-eeeeecccCccceEeecCCccccc
Confidence 97653 2233456789999999999997546789999999999999998654322 234568999999999999752110
Q ss_pred eecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecC
Q 036510 166 LVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245 (288)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~ 245 (288)
.. .....++++|++|+.|++|+|||++++.....+...+.+|..+|.+|+|+|+.. .+.+||+++.|++|++||++..
T Consensus 162 ~~-~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~-~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 162 GE-HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL-LRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS-SSEEEEEEETTSCEEEEEESST
T ss_pred cc-CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCC-CceEEEEEECCCcEEEEEeCCC
Confidence 00 000112368999999999999999876433345667889999999999999731 1368999999999999998754
Q ss_pred CCcccceEe--eccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 246 GDQWEGKVL--HDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 246 ~~~~~~~~~--~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
........+ ..+...|.+++|+|+|++||+++.|++|+||+.
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~ 283 (297)
T 2pm7_B 240 QGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (297)
T ss_dssp TSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred CCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence 322222233 456788999999999999999999999999984
No 2
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.4e-47 Score=327.62 Aligned_cols=282 Identities=53% Similarity=0.998 Sum_probs=218.1
Q ss_pred CccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEE
Q 036510 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83 (288)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~i 83 (288)
+.++.+|++.|++++|+|+|++|++|+.|++|+|||+..+....+..+.+|.+.|++++|+++.++++|+|||.|++|++
T Consensus 6 ~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp --------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred eeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 34567999999999999999999999999999999996543345788999999999999986545789999999999999
Q ss_pred eecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCC
Q 036510 84 WKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163 (288)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~ 163 (288)
||+.++. +.....+.+|...|++++|+|+..+.++++|+.|++|++||++....+.......+|...+.++.|+|+...
T Consensus 86 Wd~~~~~-~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 86 WREENGT-WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp ECCSSSC-CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC
T ss_pred EECCCCc-ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC
Confidence 9997643 224456778999999999999865678999999999999999876544434455689999999999998533
Q ss_pred Cceeccc---ccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEE
Q 036510 164 GALVGSG---FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240 (288)
Q Consensus 164 ~~~~~~~---~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw 240 (288)
+.+.... ....+.+|++|+.|++|++||++.+. ..++...+.+|..+|++++|+|+....+.+||+|+.|++|++|
T Consensus 165 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw 243 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG-QWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW 243 (316)
T ss_dssp ------CCSCCCCCCCBEECCBTTSBCCEEEECTTS-CEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEE
T ss_pred ccccccccccCccccceEEEecCCCeEEEEEeCCCC-ccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEE
Confidence 2221100 01123689999999999999997531 1234567889999999999999853334789999999999999
Q ss_pred EeecCC-CcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 241 TVAREG-DQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 241 ~~~~~~-~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
++.... .......+..|..+|++++|+|+|++||+|+.|++|+||+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 244 TCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp ECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred EccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 987521 11122345677889999999999999999999999999984
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.6e-44 Score=304.49 Aligned_cols=254 Identities=18% Similarity=0.197 Sum_probs=214.1
Q ss_pred CCCccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcE
Q 036510 2 PPQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTV 81 (288)
Q Consensus 2 ~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v 81 (288)
.+.+.+.+|.+.|.+++|+|+|++|++|+.|++|++||+.. ...+..+.+|...|.+++|+++ +++|++|+.|++|
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~s~d~~i 79 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYET--QVEVRSIQVTETPVRAGKFIAR--KNWIIVGSDDFRI 79 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEEEGG--GTEEEEEETTSEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC--CceeEEeeccCCcEEEEEEeCC--CCEEEEECCCCEE
Confidence 34567889999999999999999999999999999999854 4678889999999999999865 8899999999999
Q ss_pred EEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCC
Q 036510 82 IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161 (288)
Q Consensus 82 ~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~ 161 (288)
++||+.++. ....+.+|...|.+++|+|+ +.++++|+.|++|++||++.+. .......+|...|.++.|+|..
T Consensus 80 ~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~--~~~l~sgs~D~~v~lWd~~~~~--~~~~~~~~h~~~v~~v~~~p~~ 152 (304)
T 2ynn_A 80 RVFNYNTGE---KVVDFEAHPDYIRSIAVHPT--KPYVLSGSDDLTVKLWNWENNW--ALEQTFEGHEHFVMCVAFNPKD 152 (304)
T ss_dssp EEEETTTCC---EEEEEECCSSCEEEEEECSS--SSEEEEEETTSCEEEEEGGGTT--EEEEEECCCCSCEEEEEECTTC
T ss_pred EEEECCCCc---EEEEEeCCCCcEEEEEEcCC--CCEEEEECCCCeEEEEECCCCc--chhhhhcccCCcEEEEEECCCC
Confidence 999998765 45668899999999999998 5689999999999999998653 2334567899999999999964
Q ss_pred CCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEE
Q 036510 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT 241 (288)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~ 241 (288)
. .+|++|+.|++|++||++.+... .....+|...|..+.|+|.. .+.+|++|+.|++|++||
T Consensus 153 ~-------------~~l~sgs~D~~v~iwd~~~~~~~---~~~~~~~~~~v~~~~~~~~~--~~~~l~s~s~D~~i~iWd 214 (304)
T 2ynn_A 153 P-------------STFASGCLDRTVKVWSLGQSTPN---FTLTTGQERGVNYVDYYPLP--DKPYMITASDDLTIKIWD 214 (304)
T ss_dssp T-------------TEEEEEETTSEEEEEETTCSSCS---EEEECCCTTCEEEEEECCST--TCCEEEEEETTSEEEEEE
T ss_pred C-------------CEEEEEeCCCeEEEEECCCCCcc---ceeccCCcCcEEEEEEEEcC--CCCEEEEEcCCCeEEEEe
Confidence 2 68999999999999998765311 11224566789999999842 246899999999999999
Q ss_pred eecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 242 VAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
++... ....+.+|...|.+++|+|++++|++|+.|++|+|||.
T Consensus 215 ~~~~~---~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~ 257 (304)
T 2ynn_A 215 YQTKS---CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNS 257 (304)
T ss_dssp TTTTE---EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred CCCCc---cceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 87531 23455678889999999999999999999999999995
No 4
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.7e-42 Score=298.81 Aligned_cols=257 Identities=29% Similarity=0.483 Sum_probs=212.1
Q ss_pred ccccccc-ceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEE-EeccccCeEEEEecCCCCCCEEEEeeCCCcEEE
Q 036510 6 IETGHED-TVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAK-LSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83 (288)
Q Consensus 6 ~~~~h~~-~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~i 83 (288)
.+.+|.+ .|..++|+|+|++|++|+.|++|+||++.......... ..+|...|.+++|+++ +++|++++.|+++++
T Consensus 10 ~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~--g~~l~s~s~D~~v~i 87 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC--GNYLASASFDATTCI 87 (345)
T ss_dssp EECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTT--SSEEEEEETTSCEEE
T ss_pred eecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCC--CCEEEEEECCCcEEE
Confidence 4568987 99999999999999999999999999986543222222 3689999999999874 899999999999999
Q ss_pred eecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCC
Q 036510 84 WKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163 (288)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~ 163 (288)
|+..... ......+.+|...|.+++|+|+ +.+|++|+.|++|++||++............+|...|.++.|+|++
T Consensus 88 w~~~~~~-~~~~~~~~~h~~~v~~v~~sp~--~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~-- 162 (345)
T 3fm0_A 88 WKKNQDD-FECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ-- 162 (345)
T ss_dssp EEECCC--EEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSS--
T ss_pred EEccCCC-eEEEEEccCCCCCceEEEEeCC--CCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCC--
Confidence 9986543 3345678899999999999998 6789999999999999998765554455677899999999999987
Q ss_pred CceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEee
Q 036510 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243 (288)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~ 243 (288)
.+|++++.|++|++||++++.. .+...+.+|...|.+++|+|++ ++|++|+.|++|++|+..
T Consensus 163 ------------~~l~s~s~d~~i~~w~~~~~~~--~~~~~~~~h~~~v~~l~~sp~g----~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 163 ------------ELLASASYDDTVKLYREEEDDW--VCCATLEGHESTVWSLAFDPSG----QRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp ------------SCEEEEETTSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECTTS----SEEEEEETTSCEEEEEEE
T ss_pred ------------CEEEEEeCCCcEEEEEecCCCE--EEEEEecCCCCceEEEEECCCC----CEEEEEeCCCeEEEeccc
Confidence 7899999999999999987632 3455778999999999999984 789999999999999986
Q ss_pred cCCCccc------------ceEeec-cccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 244 REGDQWE------------GKVLHD-FKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 244 ~~~~~~~------------~~~~~~-~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
....... ...+.+ |...|++++|+|++..|++++.|++|++|+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~ 281 (345)
T 3fm0_A 225 LPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQE 281 (345)
T ss_dssp CTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEE
T ss_pred cCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEe
Confidence 4321100 011222 5678999999999999999999999999984
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=9.1e-43 Score=302.78 Aligned_cols=247 Identities=18% Similarity=0.195 Sum_probs=201.5
Q ss_pred ccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCce--eeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeec
Q 036510 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQ--HLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE 86 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~ 86 (288)
.|+..|.+++|+|++ +|++|+.|++|+|||+..+... ....+.+|.+.|++++|+++ +++|++|+.|++|++||+
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spd--g~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSS--GTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEET
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCC--CCEEEEEeCCCeEEEEEC
Confidence 356789999999986 7889999999999999654321 23345699999999999865 899999999999999999
Q ss_pred CCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCce
Q 036510 87 GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL 166 (288)
Q Consensus 87 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~ 166 (288)
.++. ....+.+|...|++++|+|++ ..++++|+.|++|++||++.+...... ....|...+.++.|+|++.
T Consensus 157 ~~~~---~~~~~~~h~~~V~~~~~~~~~-~~~l~s~s~D~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~---- 227 (344)
T 4gqb_B 157 AQQV---VLSSYRAHAAQVTCVAASPHK-DSVFLSCSEDNRILLWDTRCPKPASQI-GCSAPGYLPTSLAWHPQQS---- 227 (344)
T ss_dssp TTTE---EEEEECCCSSCEEEEEECSSC-TTEEEEEETTSCEEEEETTSSSCEEEC-C----CCCEEEEEECSSCT----
T ss_pred CCCc---EEEEEcCcCCceEEEEecCCC-CCceeeeccccccccccccccceeeee-ecceeeccceeeeecCCCC----
Confidence 8764 456788999999999999985 356899999999999999876543221 1234556789999999763
Q ss_pred ecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCC
Q 036510 167 VGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREG 246 (288)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~ 246 (288)
++|++|+.|++|+|||++++ +++..+.+|...|++++|+|++ ..+||+||.|++|+|||++..
T Consensus 228 ---------~~l~sg~~dg~v~~wd~~~~----~~~~~~~~h~~~v~~v~fsp~g---~~~lasgs~D~~i~vwd~~~~- 290 (344)
T 4gqb_B 228 ---------EVFVFGDENGTVSLVDTKST----SCVLSSAVHSQCVTGLVFSPHS---VPFLASLSEDCSLAVLDSSLS- 290 (344)
T ss_dssp ---------TEEEEEETTSEEEEEESCC------CCEEEECCSSCEEEEEECSSS---SCCEEEEETTSCEEEECTTCC-
T ss_pred ---------cceEEeccCCcEEEEECCCC----cEEEEEcCCCCCEEEEEEccCC---CeEEEEEeCCCeEEEEECCCC-
Confidence 67899999999999999876 4567789999999999999985 357999999999999998643
Q ss_pred CcccceEeeccccCeEEEEeecCCC-EEEEEeCCCcEEEeEc
Q 036510 247 DQWEGKVLHDFKTPVYRVSWSLTGN-ILAVADGNNNVTLWEE 287 (288)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~~~spdg~-~l~s~~~d~~v~~w~~ 287 (288)
+...+.+|.+.|++++|||+|+ +|++|+.|++|++|++
T Consensus 291 ---~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 291 ---ELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVV 329 (344)
T ss_dssp ---EEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred ---cEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEEC
Confidence 1233567889999999999986 5779999999999985
No 6
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.7e-42 Score=298.82 Aligned_cols=259 Identities=27% Similarity=0.474 Sum_probs=213.4
Q ss_pred ccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeec
Q 036510 7 ETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE 86 (288)
Q Consensus 7 ~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~ 86 (288)
..+|++.|.+++|+|+|++|++|+.|+++++|++.....+.+..+.+|...|.+++|+++ +++|++++.|++|++||+
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~--~~~l~s~s~D~~v~iwd~ 134 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSVWVWEV 134 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEEE
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCC--CCEEEEEECCCeEEEEEC
Confidence 468999999999999999999999999999999876555678889999999999999864 899999999999999999
Q ss_pred CCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCce
Q 036510 87 GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL 166 (288)
Q Consensus 87 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~ 166 (288)
...........+..|...|.+++|+|+ +.++++|+.|++|++|+.+.+. +.......+|...|.++.|+|++
T Consensus 135 ~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~i~~w~~~~~~-~~~~~~~~~h~~~v~~l~~sp~g----- 206 (345)
T 3fm0_A 135 DEEDEYECVSVLNSHTQDVKHVVWHPS--QELLASASYDDTVKLYREEEDD-WVCCATLEGHESTVWSLAFDPSG----- 206 (345)
T ss_dssp CTTSCEEEEEEECCCCSCEEEEEECSS--SSCEEEEETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECTTS-----
T ss_pred CCCCCeEEEEEecCcCCCeEEEEECCC--CCEEEEEeCCCcEEEEEecCCC-EEEEEEecCCCCceEEEEECCCC-----
Confidence 876655556677889999999999998 5689999999999999987642 22334567899999999999987
Q ss_pred ecccccCCCceeEEeecCCcEEEEEEeCCce-----------eeeeeecccc-CCcceEEEEecCCCCCCCcEEEEEeCC
Q 036510 167 VGSGFLDPVQKLCSGGCDNTVKVWKLYNGIW-----------KMDCFPALQM-HTDWVRDVAWAPNLGLPKSTIASASED 234 (288)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-----------~~~~~~~~~~-h~~~V~~v~~sp~~~~~~~~l~s~s~D 234 (288)
++|++++.|++|+|||...... ..+++..+.+ |...|.+++|+|+. .+|++++.|
T Consensus 207 ---------~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~----~~l~s~~~d 273 (345)
T 3fm0_A 207 ---------QRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT----GALATACGD 273 (345)
T ss_dssp ---------SEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTT----CCEEEEETT
T ss_pred ---------CEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCC----CEEEEEeCC
Confidence 7899999999999999854211 1123344444 88899999999984 579999999
Q ss_pred CcEEEEEeecCCCccc------ceEeeccccCeEEEEeecCC-CEEEEEeCCCcEEEeEcC
Q 036510 235 GKVIIWTVAREGDQWE------GKVLHDFKTPVYRVSWSLTG-NILAVADGNNNVTLWEEA 288 (288)
Q Consensus 235 ~~i~iw~~~~~~~~~~------~~~~~~~~~~i~~~~~spdg-~~l~s~~~d~~v~~w~~~ 288 (288)
+.|++|+......... ......|...|++++|+|++ .+||+|+.|++|+||+.+
T Consensus 274 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~ 334 (345)
T 3fm0_A 274 DAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQ 334 (345)
T ss_dssp SCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEEC
T ss_pred CeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEec
Confidence 9999999875422111 11123567899999999998 499999999999999953
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=298.72 Aligned_cols=247 Identities=20% Similarity=0.342 Sum_probs=210.5
Q ss_pred cccccccceEEEEEcCC----CCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcE
Q 036510 6 IETGHEDTVHDVAMDYY----GKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTV 81 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~----g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v 81 (288)
.+.+|++.|++++|+|+ +++|+||+.|++|+||++..+.......+.+|...|.+++|+++ +.++++++.|++|
T Consensus 27 ~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~--~~~l~s~s~D~~i 104 (321)
T 3ow8_A 27 QEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHT--LPIAASSSLDAHI 104 (321)
T ss_dssp ETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSS--SSEEEEEETTSEE
T ss_pred ecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCC--CCEEEEEeCCCcE
Confidence 45699999999999874 67999999999999999875544456678999999999999865 7899999999999
Q ss_pred EEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCC
Q 036510 82 IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161 (288)
Q Consensus 82 ~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~ 161 (288)
++||+.++. ....+..|...+.+++|+|+ +.++++|+.|+.|++|+++.+.. ......|...+.++.|+|++
T Consensus 105 ~lWd~~~~~---~~~~~~~~~~~~~~~~~spd--g~~l~~g~~dg~v~i~~~~~~~~---~~~~~~~~~~v~~~~~spdg 176 (321)
T 3ow8_A 105 RLWDLENGK---QIKSIDAGPVDAWTLAFSPD--SQYLATGTHVGKVNIFGVESGKK---EYSLDTRGKFILSIAYSPDG 176 (321)
T ss_dssp EEEETTTTE---EEEEEECCTTCCCCEEECTT--SSEEEEECTTSEEEEEETTTCSE---EEEEECSSSCEEEEEECTTS
T ss_pred EEEECCCCC---EEEEEeCCCccEEEEEECCC--CCEEEEEcCCCcEEEEEcCCCce---eEEecCCCceEEEEEECCCC
Confidence 999998764 44567778889999999998 67899999999999999987542 23345677889999999987
Q ss_pred CCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEE
Q 036510 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT 241 (288)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~ 241 (288)
++|++|+.|+.|++||++++ +++..+.+|...|.+++|+|++ .+|++|+.|++|++||
T Consensus 177 --------------~~lasg~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~~spd~----~~l~s~s~dg~i~iwd 234 (321)
T 3ow8_A 177 --------------KYLASGAIDGIINIFDIATG----KLLHTLEGHAMPIRSLTFSPDS----QLLVTASDDGYIKIYD 234 (321)
T ss_dssp --------------SEEEEEETTSCEEEEETTTT----EEEEEECCCSSCCCEEEECTTS----CEEEEECTTSCEEEEE
T ss_pred --------------CEEEEEcCCCeEEEEECCCC----cEEEEEcccCCceeEEEEcCCC----CEEEEEcCCCeEEEEE
Confidence 78999999999999999876 4566788999999999999984 6899999999999999
Q ss_pred eecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 242 VAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
++... ....+.+|..+|.+++|+|+|++|++|+.|++|+|||+
T Consensus 235 ~~~~~---~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~ 277 (321)
T 3ow8_A 235 VQHAN---LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDV 277 (321)
T ss_dssp TTTCC---EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCcc---eeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 87532 23455678889999999999999999999999999995
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-42 Score=306.83 Aligned_cols=251 Identities=23% Similarity=0.356 Sum_probs=215.2
Q ss_pred CccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEE
Q 036510 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83 (288)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~i 83 (288)
...+.+|.++|++++|+|++++|++|+.|++|++||+.. ++...++.+|...|++++|+++ +.+|++|+.|++|++
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~--~~~~~~l~~h~~~V~~v~~~~~--~~~l~sgs~D~~i~i 176 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET--GDFERTLKGHTDSVQDISFDHS--GKLLASCSADMTIKL 176 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTT--CCCCEEECCCSSCEEEEEECTT--SSEEEEEETTSCCCE
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--CcEEEEEeccCCcEEEEEEcCC--CCEEEEEeCCCeEEE
Confidence 345669999999999999999999999999999999854 3567889999999999999864 889999999999999
Q ss_pred eecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCC
Q 036510 84 WKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163 (288)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~ 163 (288)
||+.+.. ....+.+|...|.+++|+|+ +.++++|+.|++|++||++.+.. .....+|...|.++.|+|++
T Consensus 177 wd~~~~~---~~~~~~~h~~~V~~v~~~p~--~~~l~s~s~D~~i~~wd~~~~~~---~~~~~~h~~~v~~~~~~~~g-- 246 (410)
T 1vyh_C 177 WDFQGFE---CIRTMHGHDHNVSSVSIMPN--GDHIVSASRDKTIKMWEVQTGYC---VKTFTGHREWVRMVRPNQDG-- 246 (410)
T ss_dssp EETTSSC---EEECCCCCSSCEEEEEECSS--SSEEEEEETTSEEEEEETTTCCE---EEEEECCSSCEEEEEECTTS--
T ss_pred EeCCCCc---eeEEEcCCCCCEEEEEEeCC--CCEEEEEeCCCeEEEEECCCCcE---EEEEeCCCccEEEEEECCCC--
Confidence 9997654 45667889999999999998 66899999999999999987643 34456899999999999987
Q ss_pred CceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCC----------------CCcE
Q 036510 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGL----------------PKST 227 (288)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~----------------~~~~ 227 (288)
.+|++|+.|++|++||+.++ ++...+.+|...|.++.|+|+..+ .+.+
T Consensus 247 ------------~~l~s~s~D~~v~vwd~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 310 (410)
T 1vyh_C 247 ------------TLIASCSNDQTVRVWVVATK----ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPF 310 (410)
T ss_dssp ------------SEEEEEETTSCEEEEETTTC----CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCE
T ss_pred ------------CEEEEEcCCCeEEEEECCCC----ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCE
Confidence 78999999999999999876 345567889999999999996311 1458
Q ss_pred EEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 228 IASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 228 l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
|++|+.|++|++||++... ....+.+|..+|.+++|+|+|++|++|+.|++|+|||.
T Consensus 311 l~sgs~D~~i~iwd~~~~~---~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~ 367 (410)
T 1vyh_C 311 LLSGSRDKTIKMWDVSTGM---CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 (410)
T ss_dssp EEEEETTSEEEEEETTTTE---EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECC
T ss_pred EEEEeCCCeEEEEECCCCc---eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 9999999999999987531 22445678889999999999999999999999999985
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.2e-42 Score=306.10 Aligned_cols=261 Identities=25% Similarity=0.391 Sum_probs=216.6
Q ss_pred ccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEe
Q 036510 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW 84 (288)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iw 84 (288)
..+.+|.+.|.+++|+|+|++|++|+.|++|++||+.. .+++.++.+|...|.+++|+++ +.+|++++.|++|++|
T Consensus 144 ~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~--~~~~~~~~~h~~~V~~v~~~p~--~~~l~s~s~D~~i~~w 219 (410)
T 1vyh_C 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVSIMPN--GDHIVSASRDKTIKMW 219 (410)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS--SCEEECCCCCSSCEEEEEECSS--SSEEEEEETTSEEEEE
T ss_pred EEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC--CceeEEEcCCCCCEEEEEEeCC--CCEEEEEeCCCeEEEE
Confidence 35668999999999999999999999999999999854 4678889999999999999864 8899999999999999
Q ss_pred ecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCC
Q 036510 85 KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPG 164 (288)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~ 164 (288)
|+.++. ....+.+|...|.++.|+|+ +.++++|+.|++|++||++.... .....+|...|.++.|+|+....
T Consensus 220 d~~~~~---~~~~~~~h~~~v~~~~~~~~--g~~l~s~s~D~~v~vwd~~~~~~---~~~~~~h~~~v~~~~~~~~~~~~ 291 (410)
T 1vyh_C 220 EVQTGY---CVKTFTGHREWVRMVRPNQD--GTLIASCSNDQTVRVWVVATKEC---KAELREHRHVVECISWAPESSYS 291 (410)
T ss_dssp ETTTCC---EEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTCCE---EEEECCCSSCEEEEEECCSCGGG
T ss_pred ECCCCc---EEEEEeCCCccEEEEEECCC--CCEEEEEcCCCeEEEEECCCCce---eeEecCCCceEEEEEEcCccccc
Confidence 998765 45668899999999999998 67899999999999999986532 23456788999999999975311
Q ss_pred ceec------ccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEE
Q 036510 165 ALVG------SGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVI 238 (288)
Q Consensus 165 ~~~~------~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~ 238 (288)
.... .....++.+|++|+.|++|++||++++ +++..+.+|..+|.++.|+|++ .+|++|+.|++|+
T Consensus 292 ~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~----~~~~~~~~h~~~v~~v~~~~~g----~~l~s~s~D~~i~ 363 (410)
T 1vyh_C 292 SISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG----MCLMTLVGHDNWVRGVLFHSGG----KFILSCADDKTLR 363 (410)
T ss_dssp GGGGCCSCC-------CCEEEEEETTSEEEEEETTTT----EEEEEEECCSSCEEEEEECSSS----SCEEEEETTTEEE
T ss_pred chhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC----ceEEEEECCCCcEEEEEEcCCC----CEEEEEeCCCeEE
Confidence 1000 001123568999999999999999876 4566778999999999999974 6899999999999
Q ss_pred EEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEcC
Q 036510 239 IWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288 (288)
Q Consensus 239 iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~~ 288 (288)
+||+.... ....+..|...|++++|+|++++|++|+.|++|+||+.+
T Consensus 364 vwd~~~~~---~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 364 VWDYKNKR---CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EECCTTSC---CCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEECCCCc---eEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 99986532 234556788899999999999999999999999999863
No 10
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-41 Score=293.46 Aligned_cols=258 Identities=28% Similarity=0.429 Sum_probs=199.0
Q ss_pred ccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCC-----CceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEE
Q 036510 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNN-----TSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~-----~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~i 83 (288)
+|.+.|.+++|+|++++|++|+.|++|+||++... ..+.+..+.+|...|++++|+++ +++|++|+.|++|++
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~--g~~las~s~D~~v~i 133 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND--GYYLATCSRDKSVWI 133 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTT--SCEEEEEETTSCEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCC--CCEEEEEeCCCEEEE
Confidence 49999999999999999999999999999998431 23567788999999999999865 899999999999999
Q ss_pred eecCCC-CceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCC
Q 036510 84 WKEGNS-NEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTA 162 (288)
Q Consensus 84 wd~~~~-~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~ 162 (288)
||+... ........+.+|...|.+++|+|+ +.++++|+.|++|++||.+.+. +.......+|...|.++.|+|+..
T Consensus 134 wd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~l~s~s~D~~i~iW~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~ 210 (330)
T 2hes_X 134 WETDESGEEYECISVLQEHSQDVKHVIWHPS--EALLASSSYDDTVRIWKDYDDD-WECVAVLNGHEGTVWSSDFDKTEG 210 (330)
T ss_dssp EECCTTCCCCEEEEEECCCSSCEEEEEECSS--SSEEEEEETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECCSSS
T ss_pred EeccCCCCCeEEEEEeccCCCceEEEEECCC--CCEEEEEcCCCeEEEEECCCCC-eeEEEEccCCCCcEEEEEecCCCC
Confidence 998533 333455677889999999999998 6789999999999999987542 233456678999999999999842
Q ss_pred CCceecccccCCCceeEEeecCCcEEEEEEeCCc----eeeeeeecccc-CCcceEEEEecCCCCCCCcEEEEEeCCCcE
Q 036510 163 PGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGI----WKMDCFPALQM-HTDWVRDVAWAPNLGLPKSTIASASEDGKV 237 (288)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~----~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i 237 (288)
..+|++|+.|++|++||+..+. ....+...+.+ |...|.+++|+|+ .+|++++.|++|
T Consensus 211 ------------~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~-----~~l~s~~~dg~v 273 (330)
T 2hes_X 211 ------------VFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFN-----GLIASVGADGVL 273 (330)
T ss_dssp ------------SCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTT-----SCEEEEETTSCE
T ss_pred ------------eeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCC-----CEEEEEeCCCEE
Confidence 1579999999999999997531 11123334444 8999999999975 479999999999
Q ss_pred EEEEeecCCCcccceEeecccc-CeEEEEeec--CCCEEEEEeCCCcEEEeEcC
Q 036510 238 IIWTVAREGDQWEGKVLHDFKT-PVYRVSWSL--TGNILAVADGNNNVTLWEEA 288 (288)
Q Consensus 238 ~iw~~~~~~~~~~~~~~~~~~~-~i~~~~~sp--dg~~l~s~~~d~~v~~w~~~ 288 (288)
++|+...............|.. .|.+++|+| ++++|++|+.|++|+||+++
T Consensus 274 ~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 274 AVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred EEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 9999864311111122245665 899999999 79999999999999999963
No 11
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.1e-42 Score=294.38 Aligned_cols=245 Identities=21% Similarity=0.377 Sum_probs=213.8
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
.+.+|+..|.+++|+++++++++++.|++|++||+.. ++.+..+.+|...++.++|+++ +++|++++.|+.|++|+
T Consensus 75 ~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~--~~~~~~~~~~~~~~~~~~~spd--g~~l~~g~~dg~v~i~~ 150 (321)
T 3ow8_A 75 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLEN--GKQIKSIDAGPVDAWTLAFSPD--SQYLATGTHVGKVNIFG 150 (321)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT--TEEEEEEECCTTCCCCEEECTT--SSEEEEECTTSEEEEEE
T ss_pred eeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC--CCEEEEEeCCCccEEEEEECCC--CCEEEEEcCCCcEEEEE
Confidence 4679999999999999999999999999999999854 4678889999999999999865 89999999999999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCc
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGA 165 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~ 165 (288)
+..+. ....+..|...|.+++|+|+ +.++++|+.|+.|++||++++. .....++|...|.++.|+|++
T Consensus 151 ~~~~~---~~~~~~~~~~~v~~~~~spd--g~~lasg~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~spd~---- 218 (321)
T 3ow8_A 151 VESGK---KEYSLDTRGKFILSIAYSPD--GKYLASGAIDGIINIFDIATGK---LLHTLEGHAMPIRSLTFSPDS---- 218 (321)
T ss_dssp TTTCS---EEEEEECSSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCCCEEEECTTS----
T ss_pred cCCCc---eeEEecCCCceEEEEEECCC--CCEEEEEcCCCeEEEEECCCCc---EEEEEcccCCceeEEEEcCCC----
Confidence 98765 34456778889999999998 6789999999999999998653 344567899999999999987
Q ss_pred eecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecC
Q 036510 166 LVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245 (288)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~ 245 (288)
.+|++++.|++|++||++.+ ++...+.+|...|.+++|+|++ .+|++|+.|++|++||+...
T Consensus 219 ----------~~l~s~s~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~sp~~----~~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 219 ----------QLLVTASDDGYIKIYDVQHA----NLAGTLSGHASWVLNVAFCPDD----THFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp ----------CEEEEECTTSCEEEEETTTC----CEEEEECCCSSCEEEEEECTTS----SEEEEEETTSCEEEEETTTT
T ss_pred ----------CEEEEEcCCCeEEEEECCCc----ceeEEEcCCCCceEEEEECCCC----CEEEEEeCCCcEEEEeCCCC
Confidence 78999999999999999875 3456778999999999999984 68999999999999998743
Q ss_pred CCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 246 GDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 246 ~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
. ....+.+|...|.+++|+|+|++|++++.|++|+|||.
T Consensus 281 ~---~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 281 T---CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp E---EEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred E---EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 1 23445677889999999999999999999999999995
No 12
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.6e-41 Score=295.95 Aligned_cols=250 Identities=18% Similarity=0.258 Sum_probs=207.0
Q ss_pred CccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCc--------------------------------------
Q 036510 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTS-------------------------------------- 45 (288)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~-------------------------------------- 45 (288)
+..+.+|.+.|++++|+|++++|+|||.|++|++||......
T Consensus 57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~ 136 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLT 136 (354)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECC
T ss_pred EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEe
Confidence 345679999999999999999999999999999999642210
Q ss_pred --------eeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCe
Q 036510 46 --------QHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGL 117 (288)
Q Consensus 46 --------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~ 117 (288)
.....+.+|...|.+++|+++ +..|++++.|++|++||+.++. ....+.+|...|.+++|+|+..+.
T Consensus 137 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~t~s~D~~v~lwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 137 FDKNENMAAKKKSVAMHTNYLSACSFTNS--DMQILTASGDGTCALWDVESGQ---LLQSFHGHGADVLCLDLAPSETGN 211 (354)
T ss_dssp CCTTCCSGGGCEEEEECSSCEEEEEECSS--SSEEEEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEEECCCSSCC
T ss_pred ccccccccccceeeeccCCcEEEEEEeCC--CCEEEEEeCCCcEEEEeCCCCe---EEEEEcCCCCCeEEEEEEeCCCCC
Confidence 113445678899999999864 7899999999999999998765 456788899999999999976678
Q ss_pred EEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCce
Q 036510 118 CLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIW 197 (288)
Q Consensus 118 ~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 197 (288)
++++|+.|++|++||++++.. .....+|...|.++.|+|++ .+|++++.|++|++||++.+.
T Consensus 212 ~l~sgs~Dg~v~~wd~~~~~~---~~~~~~h~~~v~~v~~~p~~--------------~~l~s~s~D~~v~lwd~~~~~- 273 (354)
T 2pbi_B 212 TFVSGGCDKKAMVWDMRSGQC---VQAFETHESDVNSVRYYPSG--------------DAFASGSDDATCRLYDLRADR- 273 (354)
T ss_dssp EEEEEETTSCEEEEETTTCCE---EEEECCCSSCEEEEEECTTS--------------SEEEEEETTSCEEEEETTTTE-
T ss_pred EEEEEeCCCeEEEEECCCCcE---EEEecCCCCCeEEEEEeCCC--------------CEEEEEeCCCeEEEEECCCCc-
Confidence 899999999999999987642 34557899999999999987 789999999999999998752
Q ss_pred eeeeeecc--ccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEE
Q 036510 198 KMDCFPAL--QMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAV 275 (288)
Q Consensus 198 ~~~~~~~~--~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s 275 (288)
.+..+ ..+...+.+++|+|++ .+|++|+.|++|++||+.... ....+.+|.++|.+++|+|||++|++
T Consensus 274 ---~~~~~~~~~~~~~~~~~~~s~~g----~~l~~g~~d~~i~vwd~~~~~---~~~~l~~h~~~v~~l~~spdg~~l~s 343 (354)
T 2pbi_B 274 ---EVAIYSKESIIFGASSVDFSLSG----RLLFAGYNDYTINVWDVLKGS---RVSILFGHENRVSTLRVSPDGTAFCS 343 (354)
T ss_dssp ---EEEEECCTTCCSCEEEEEECTTS----SEEEEEETTSCEEEEETTTCS---EEEEECCCSSCEEEEEECTTSSCEEE
T ss_pred ---EEEEEcCCCcccceeEEEEeCCC----CEEEEEECCCcEEEEECCCCc---eEEEEECCCCcEEEEEECCCCCEEEE
Confidence 22222 2344568999999984 789999999999999986432 22455678899999999999999999
Q ss_pred EeCCCcEEEeE
Q 036510 276 ADGNNNVTLWE 286 (288)
Q Consensus 276 ~~~d~~v~~w~ 286 (288)
|+.|++|+||+
T Consensus 344 gs~D~~v~vW~ 354 (354)
T 2pbi_B 344 GSWDHTLRVWA 354 (354)
T ss_dssp EETTSEEEEEC
T ss_pred EcCCCCEEecC
Confidence 99999999996
No 13
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-41 Score=291.22 Aligned_cols=258 Identities=28% Similarity=0.474 Sum_probs=203.4
Q ss_pred ccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEE-ec-cccCeEEEEecCCCCCCEEEEeeCCCcEE
Q 036510 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKL-SG-HKGAVWEVAWAHPKFGSILASCSFDGTVI 82 (288)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~-~~-h~~~v~~~~~~~~~~~~~l~s~s~d~~v~ 82 (288)
+.+.+|++.|.+++|+++ +|++|+.|++|++|++..+....+..+ .+ |...|++++|+++ +.+|++++.|++|+
T Consensus 8 ~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~--~~~las~s~D~~v~ 83 (330)
T 2hes_X 8 KSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPH--TSLLAAGSFDSTVS 83 (330)
T ss_dssp EEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTT--SSEEEEEETTSCEE
T ss_pred eeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCC--CCEEEEEeCCCcEE
Confidence 345699999999999986 999999999999999865433455556 44 9999999999864 89999999999999
Q ss_pred EeecCCCC----ceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCC-CCeeeEEeeccCCCCeeEEEe
Q 036510 83 IWKEGNSN----EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARAD-GGWDTSRIDQAHPVGVTSVSW 157 (288)
Q Consensus 83 iwd~~~~~----~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~v~~i~~ 157 (288)
||+..... .......+.+|...|.+++|+|+ +.+|++|+.|++|++||++.. ..........+|...|.++.|
T Consensus 84 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~--g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 84 IWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND--GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEC-------CCCEEEEEEC----CEEEEEECTT--SCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEcccCcCccccceeEEEEcCCCCcEEEEEECCC--CCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 99985321 22345567889999999999998 678999999999999999643 233344566789999999999
Q ss_pred CCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcE
Q 036510 158 APSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237 (288)
Q Consensus 158 ~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i 237 (288)
+|++ .+|++++.|++|++||+..+. .+++..+.+|...|.+++|+|+.. +.+|++|+.|++|
T Consensus 162 ~p~~--------------~~l~s~s~D~~i~iW~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~--~~~l~s~s~D~~v 223 (330)
T 2hes_X 162 HPSE--------------ALLASSSYDDTVRIWKDYDDD--WECVAVLNGHEGTVWSSDFDKTEG--VFRLCSGSDDSTV 223 (330)
T ss_dssp CSSS--------------SEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCSSS--SCEEEEEETTSCE
T ss_pred CCCC--------------CEEEEEcCCCeEEEEECCCCC--eeEEEEccCCCCcEEEEEecCCCC--eeEEEEEeCCCeE
Confidence 9987 789999999999999998752 245667889999999999999731 3579999999999
Q ss_pred EEEEeecCCCc-----ccceEeec-cccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 238 IIWTVAREGDQ-----WEGKVLHD-FKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 238 ~iw~~~~~~~~-----~~~~~~~~-~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
++|++...... .....+.. |..+|++++|+|++ +|++++.|++|+||+.
T Consensus 224 ~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~ 278 (330)
T 2hes_X 224 RVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEE 278 (330)
T ss_dssp EEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEE
T ss_pred EEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEc
Confidence 99999753211 01112222 67899999999766 7899999999999984
No 14
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-41 Score=293.71 Aligned_cols=281 Identities=46% Similarity=0.821 Sum_probs=221.9
Q ss_pred CCccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEE
Q 036510 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVI 82 (288)
Q Consensus 3 ~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~ 82 (288)
+..++.+|++.|.+++|+|+|++|++|+.|++|++|++.....+.+..+.+|...|++++|+++.++.+|++++.|+.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 45667899999999999999999999999999999999755667788899999999999998754589999999999999
Q ss_pred EeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCC
Q 036510 83 IWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTA 162 (288)
Q Consensus 83 iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~ 162 (288)
+||+..+. +.....+..|...|.+++|+|+..+.++++++.|+.|++||++...... ......|...|.++.|+|...
T Consensus 83 iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 83 IWKEENGR-WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEETTE-EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCC-EEEEECCTTCEEEEEECCCC-
T ss_pred EEEcCCCc-eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCcee-eEEecCCCCceEEEEEcCccc
Confidence 99997653 3344566789999999999997435689999999999999998764322 234567889999999999521
Q ss_pred CCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEe
Q 036510 163 PGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV 242 (288)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~ 242 (288)
.... ......++.+|++++.|+.|++||++.+.....+...+.+|...|.+++|+|+.. .+.+|++++.|+.|++||+
T Consensus 161 ~~~~-~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~-~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 161 EEDG-EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL-LRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp ----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS-SSEEEEEEETTSCEEEEEE
T ss_pred cccc-cccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCC-CCCeEEEEeCCCEEEEEeC
Confidence 0000 0000112378999999999999999876544455667789999999999999720 0378999999999999999
Q ss_pred ecCCCcccceEe--eccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 243 AREGDQWEGKVL--HDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 243 ~~~~~~~~~~~~--~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
............ ..+...|.+++|+|+|++|++++.|+.|+||++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 239 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 285 (379)
T ss_dssp SSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEE
T ss_pred CCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeC
Confidence 864322222222 236678999999999999999999999999985
No 15
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.5e-41 Score=292.05 Aligned_cols=249 Identities=18% Similarity=0.298 Sum_probs=209.6
Q ss_pred CccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEE
Q 036510 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83 (288)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~i 83 (288)
+..+.+|.+.|++++|+|+|++|++|+.|++|++||... ...+..+..|...|.+++|+++ +.+|++++.|+.+++
T Consensus 48 ~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~--~~~~~~~~~~~~~v~~~~~s~~--~~~l~s~~~d~~v~i 123 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYT--TNKVHAIPLRSSWVMTCAYAPS--GNYVACGGLDNICSI 123 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT--CCEEEEEECSSSCEEEEEECTT--SSEEEEEETTCEEEE
T ss_pred heeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCC--CCcceEeecCCccEEEEEECCC--CCEEEEEeCCCeEEE
Confidence 345779999999999999999999999999999999854 3567888999999999999864 899999999999999
Q ss_pred eecCCCC-ceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCC
Q 036510 84 WKEGNSN-EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTA 162 (288)
Q Consensus 84 wd~~~~~-~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~ 162 (288)
|++.... .......+.+|...|.++.|+|+ + .+++++.|++|++||++++. ......+|...|.++.|+|++
T Consensus 124 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~-~l~s~s~d~~i~~wd~~~~~---~~~~~~~h~~~v~~~~~~~~~- 196 (340)
T 1got_B 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDD--N-QIVTSSGDTTCALWDIETGQ---QTTTFTGHTGDVMSLSLAPDT- 196 (340)
T ss_dssp EETTTCSBSCEEEEEEECCSSCEEEEEEEET--T-EEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECTTS-
T ss_pred EECccCCCcceeEEEecCCCccEEEEEECCC--C-cEEEEECCCcEEEEECCCCc---EEEEEcCCCCceEEEEECCCC-
Confidence 9987643 22344567889999999999986 3 37899999999999998653 334557899999999999987
Q ss_pred CCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEe
Q 036510 163 PGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV 242 (288)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~ 242 (288)
.++++|+.|++|++||++++ ++...+.+|...|.+++|+|++ .+|++|+.|++|++||+
T Consensus 197 -------------~~l~sg~~d~~v~~wd~~~~----~~~~~~~~h~~~v~~v~~~p~~----~~l~s~s~d~~v~iwd~ 255 (340)
T 1got_B 197 -------------RLFVSGACDASAKLWDVREG----MCRQTFTGHESDINAICFFPNG----NAFATGSDDATCRLFDL 255 (340)
T ss_dssp -------------SEEEEEETTSCEEEEETTTC----SEEEEECCCSSCEEEEEECTTS----SEEEEEETTSCEEEEET
T ss_pred -------------CEEEEEeCCCcEEEEECCCC----eeEEEEcCCcCCEEEEEEcCCC----CEEEEEcCCCcEEEEEC
Confidence 78999999999999999876 3556778999999999999984 78999999999999998
Q ss_pred ecCCCcccceEee--ccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 243 AREGDQWEGKVLH--DFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 243 ~~~~~~~~~~~~~--~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
+.... ...+. .+...|.+++|+|+|++|++|+.|++|+|||.
T Consensus 256 ~~~~~---~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~ 299 (340)
T 1got_B 256 RADQE---LMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDA 299 (340)
T ss_dssp TTTEE---EEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CCCcE---EEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEc
Confidence 75321 11111 22347999999999999999999999999995
No 16
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.2e-41 Score=290.89 Aligned_cols=255 Identities=23% Similarity=0.338 Sum_probs=205.7
Q ss_pred cccccccceEEEEEcCCC-CEEEEeeCCCcEEEEEeCCCC---ceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcE
Q 036510 6 IETGHEDTVHDVAMDYYG-KRLATASSDYSIKIIGVGNNT---SQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTV 81 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g-~~l~s~~~d~~i~lwd~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v 81 (288)
.+.||++.|.+++|+|++ ++|+||+.|++|++|++.... +..+..+.+|...|.+++|+++ +.+|++++.|++|
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~d--g~~l~s~s~D~~v 89 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTAD--GAYALSASWDKTL 89 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCC--CCEEEEEeCCCEE
Confidence 467999999999999965 899999999999999985322 3457789999999999999864 8999999999999
Q ss_pred EEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCC
Q 036510 82 IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161 (288)
Q Consensus 82 ~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~ 161 (288)
++||+.++. ....+.+|...|.+++|+|+ +.++++|+.|++|++||++.. ......+|...|.++.|.|..
T Consensus 90 ~~wd~~~~~---~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~D~~i~vwd~~~~----~~~~~~~h~~~v~~~~~~~~~ 160 (319)
T 3frx_A 90 RLWDVATGE---TYQRFVGHKSDVMSVDIDKK--ASMIISGSRDKTIKVWTIKGQ----CLATLLGHNDWVSQVRVVPNE 160 (319)
T ss_dssp EEEETTTTE---EEEEEECCSSCEEEEEECTT--SCEEEEEETTSCEEEEETTSC----EEEEECCCSSCEEEEEECCC-
T ss_pred EEEECCCCC---eeEEEccCCCcEEEEEEcCC--CCEEEEEeCCCeEEEEECCCC----eEEEEeccCCcEEEEEEccCC
Confidence 999998765 45667899999999999997 678999999999999998632 234456899999999999875
Q ss_pred CCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEE
Q 036510 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT 241 (288)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~ 241 (288)
.. ..+...+++++.|++|++||+++. +....+.+|...|.+++|+|++ .+|++|+.|++|++||
T Consensus 161 ~~--------~~~~~~l~s~~~d~~i~~wd~~~~----~~~~~~~~h~~~v~~~~~sp~g----~~l~s~~~dg~i~iwd 224 (319)
T 3frx_A 161 KA--------DDDSVTIISAGNDKMVKAWNLNQF----QIEADFIGHNSNINTLTASPDG----TLIASAGKDGEIMLWN 224 (319)
T ss_dssp -------------CCEEEEEETTSCEEEEETTTT----EEEEEECCCCSCEEEEEECTTS----SEEEEEETTCEEEEEE
T ss_pred CC--------CCCccEEEEEeCCCEEEEEECCcc----hhheeecCCCCcEEEEEEcCCC----CEEEEEeCCCeEEEEE
Confidence 21 112357999999999999999775 3455678999999999999984 7899999999999999
Q ss_pred eecCCCccc----------------------------------ceEe-----------eccccCeEEEEeecCCCEEEEE
Q 036510 242 VAREGDQWE----------------------------------GKVL-----------HDFKTPVYRVSWSLTGNILAVA 276 (288)
Q Consensus 242 ~~~~~~~~~----------------------------------~~~~-----------~~~~~~i~~~~~spdg~~l~s~ 276 (288)
+...+.... ...+ ..+...+.+++|+|||++|++|
T Consensus 225 ~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg 304 (319)
T 3frx_A 225 LAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAG 304 (319)
T ss_dssp TTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEE
T ss_pred CCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEe
Confidence 865320000 0000 0123457899999999999999
Q ss_pred eCCCcEEEeEc
Q 036510 277 DGNNNVTLWEE 287 (288)
Q Consensus 277 ~~d~~v~~w~~ 287 (288)
+.|++|+|||+
T Consensus 305 ~~Dg~i~vWd~ 315 (319)
T 3frx_A 305 YTDNVIRVWQV 315 (319)
T ss_dssp ETTSCEEEEEE
T ss_pred ecCceEEEEEE
Confidence 99999999995
No 17
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.4e-41 Score=295.22 Aligned_cols=248 Identities=19% Similarity=0.168 Sum_probs=199.2
Q ss_pred cccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCce--eeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQ--HLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 8 ~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
.+|+..|.+++|+|+++ +++++.|++|+|||+..+... ......+|...|++++|+++ +++|++++.|++|++||
T Consensus 91 ~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spd--g~~l~sgs~dg~v~iwd 167 (357)
T 4g56_B 91 VQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSD--GTQAVSGGKDFSVKVWD 167 (357)
T ss_dssp EECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSS--SSEEEEEETTSCEEEEE
T ss_pred CCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCC--CCEEEEEeCCCeEEEEE
Confidence 36899999999999985 567889999999998643221 12345689999999999865 89999999999999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCc
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGA 165 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~ 165 (288)
+.++. ....+.+|...|++++|+|++ ..++++++.|++|++||++++..... .....|...+.++.|+|+..
T Consensus 168 ~~~~~---~~~~~~~h~~~v~~v~~s~~~-~~~~~s~~~dg~v~~wd~~~~~~~~~-~~~~~~~~~v~~v~~sp~~~--- 239 (357)
T 4g56_B 168 LSQKA---VLKSYNAHSSEVNCVAACPGK-DTIFLSCGEDGRILLWDTRKPKPATR-IDFCASDTIPTSVTWHPEKD--- 239 (357)
T ss_dssp TTTTE---EEEEECCCSSCEEEEEECTTC-SSCEEEEETTSCEEECCTTSSSCBCB-CCCTTCCSCEEEEEECTTST---
T ss_pred CCCCc---EEEEEcCCCCCEEEEEEccCC-CceeeeeccCCceEEEECCCCceeee-eeeccccccccchhhhhccc---
Confidence 97754 456678899999999999985 34688999999999999987643221 22345677899999999863
Q ss_pred eecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecC
Q 036510 166 LVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245 (288)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~ 245 (288)
.+|++|+.|+.|++||++++ +++..+.+|...|.+++|+|+. ..+||+|+.|++|+|||++..
T Consensus 240 ----------~~la~g~~d~~i~~wd~~~~----~~~~~~~~~~~~v~~l~~sp~~---~~~lasgs~D~~i~iwd~~~~ 302 (357)
T 4g56_B 240 ----------DTFACGDETGNVSLVNIKNP----DSAQTSAVHSQNITGLAYSYHS---SPFLASISEDCTVAVLDADFS 302 (357)
T ss_dssp ----------TEEEEEESSSCEEEEESSCG----GGCEEECCCSSCEEEEEECSSS---SCCEEEEETTSCEEEECTTSC
T ss_pred ----------ceEEEeecccceeEEECCCC----cEeEEEeccceeEEEEEEcCCC---CCEEEEEeCCCEEEEEECCCC
Confidence 67999999999999999876 3556778999999999999985 357999999999999998643
Q ss_pred CCcccceEeeccccCeEEEEeec-CCCEEEEEeCCCcEEEeEc
Q 036510 246 GDQWEGKVLHDFKTPVYRVSWSL-TGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 246 ~~~~~~~~~~~~~~~i~~~~~sp-dg~~l~s~~~d~~v~~w~~ 287 (288)
+ .....+|.+.|++++||| |+++|++|+.|++|++|++
T Consensus 303 ~----~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 303 E----VFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp E----EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred c----EeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 1 122346788999999999 8999999999999999995
No 18
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=287.31 Aligned_cols=251 Identities=16% Similarity=0.151 Sum_probs=195.9
Q ss_pred ccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeC---------CCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeC
Q 036510 7 ETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVG---------NNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSF 77 (288)
Q Consensus 7 ~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~---------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~ 77 (288)
...|+..|.+++|+|||++|++++ |.++++||.. ............|...|.+++|+++ ..|++|+.
T Consensus 26 ~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d---~~l~~~s~ 101 (344)
T 4gqb_B 26 PACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE---RGILVASD 101 (344)
T ss_dssp CSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT---TEEEEEET
T ss_pred cccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC---CeEEEEEC
Confidence 346888999999999999999888 7788888631 1111122233456788999999864 57899999
Q ss_pred CCcEEEeecCCCCceE-EeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEE
Q 036510 78 DGTVIIWKEGNSNEWI-KDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVS 156 (288)
Q Consensus 78 d~~v~iwd~~~~~~~~-~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 156 (288)
||+|+|||+.++.... ....+.+|.+.|++++|+|+ +.+|++|+.|++|++||++++. ......+|...|.++.
T Consensus 102 dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spd--g~~l~sgs~d~~i~iwd~~~~~---~~~~~~~h~~~V~~~~ 176 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSS--GTQAVSGSKDICIKVWDLAQQV---VLSSYRAHAAQVTCVA 176 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEE
T ss_pred CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCC--CCEEEEEeCCCeEEEEECCCCc---EEEEEcCcCCceEEEE
Confidence 9999999998765432 22345689999999999998 6789999999999999998653 3455678999999999
Q ss_pred eCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCc
Q 036510 157 WAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGK 236 (288)
Q Consensus 157 ~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~ 236 (288)
|+|++. .+|++++.|++|++||++++...... ....|...+.+++|+|+. +.+||+|+.|++
T Consensus 177 ~~~~~~-------------~~l~s~s~D~~v~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~p~~---~~~l~sg~~dg~ 238 (344)
T 4gqb_B 177 ASPHKD-------------SVFLSCSEDNRILLWDTRCPKPASQI--GCSAPGYLPTSLAWHPQQ---SEVFVFGDENGT 238 (344)
T ss_dssp ECSSCT-------------TEEEEEETTSCEEEEETTSSSCEEEC--C----CCCEEEEEECSSC---TTEEEEEETTSE
T ss_pred ecCCCC-------------Cceeeeccccccccccccccceeeee--ecceeeccceeeeecCCC---CcceEEeccCCc
Confidence 999873 57899999999999999876322111 124556679999999974 468999999999
Q ss_pred EEEEEeecCCCcccceEeeccccCeEEEEeecCC-CEEEEEeCCCcEEEeEc
Q 036510 237 VIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTG-NILAVADGNNNVTLWEE 287 (288)
Q Consensus 237 i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg-~~l~s~~~d~~v~~w~~ 287 (288)
|++||++..+ ....+..|...|++++|+|+| ++|++|+.|++|+|||.
T Consensus 239 v~~wd~~~~~---~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~ 287 (344)
T 4gqb_B 239 VSLVDTKSTS---CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDS 287 (344)
T ss_dssp EEEEESCC-----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECT
T ss_pred EEEEECCCCc---EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEEC
Confidence 9999987542 234567788999999999998 57999999999999995
No 19
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1e-39 Score=282.75 Aligned_cols=244 Identities=16% Similarity=0.235 Sum_probs=205.9
Q ss_pred ccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCC--ceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEe
Q 036510 7 ETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNT--SQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW 84 (288)
Q Consensus 7 ~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iw 84 (288)
+..|...|.+++|+|+|++|++|+.|+.+++|++.... ......+.+|...|.++.|+++ ..+++++.|++|++|
T Consensus 93 ~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~l~s~s~d~~i~~w 169 (340)
T 1got_B 93 IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD---NQIVTSSGDTTCALW 169 (340)
T ss_dssp EECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEET---TEEEEEETTSCEEEE
T ss_pred eecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCC---CcEEEEECCCcEEEE
Confidence 45788999999999999999999999999999986432 2456778899999999999753 469999999999999
Q ss_pred ecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCC
Q 036510 85 KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPG 164 (288)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~ 164 (288)
|+.++. ....+.+|...|.+++|+|+ +.++++|+.|++|++||++++.. .....+|...|.++.|+|++
T Consensus 170 d~~~~~---~~~~~~~h~~~v~~~~~~~~--~~~l~sg~~d~~v~~wd~~~~~~---~~~~~~h~~~v~~v~~~p~~--- 238 (340)
T 1got_B 170 DIETGQ---QTTTFTGHTGDVMSLSLAPD--TRLFVSGACDASAKLWDVREGMC---RQTFTGHESDINAICFFPNG--- 238 (340)
T ss_dssp ETTTTE---EEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTCSE---EEEECCCSSCEEEEEECTTS---
T ss_pred ECCCCc---EEEEEcCCCCceEEEEECCC--CCEEEEEeCCCcEEEEECCCCee---EEEEcCCcCCEEEEEEcCCC---
Confidence 997754 45667889999999999997 67899999999999999987532 34557899999999999987
Q ss_pred ceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeecc--ccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEe
Q 036510 165 ALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPAL--QMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV 242 (288)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~ 242 (288)
++|++|+.|++|++||++.+. .+..+ ..+...|.+++|+|++ .+|++|+.|+.|++||+
T Consensus 239 -----------~~l~s~s~d~~v~iwd~~~~~----~~~~~~~~~~~~~v~~~~~s~~g----~~l~~g~~d~~i~vwd~ 299 (340)
T 1got_B 239 -----------NAFATGSDDATCRLFDLRADQ----ELMTYSHDNIICGITSVSFSKSG----RLLLAGYDDFNCNVWDA 299 (340)
T ss_dssp -----------SEEEEEETTSCEEEEETTTTE----EEEEECCTTCCSCEEEEEECTTS----SEEEEEETTSEEEEEET
T ss_pred -----------CEEEEEcCCCcEEEEECCCCc----EEEEEccCCcccceEEEEECCCC----CEEEEECCCCeEEEEEc
Confidence 789999999999999998763 22222 3344579999999984 78999999999999998
Q ss_pred ecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 243 AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
.... ....+.+|.++|.+++|+|||++|++|+.|++|+|||
T Consensus 300 ~~~~---~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 300 LKAD---RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TTCC---EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ccCc---EeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 6532 2345678889999999999999999999999999997
No 20
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=9.5e-41 Score=293.61 Aligned_cols=252 Identities=18% Similarity=0.248 Sum_probs=190.1
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCC-------------------
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHP------------------- 66 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~------------------- 66 (288)
.+.||++.|++++|+|+|++|+||+.|++|++||... .+....+.+|...|.+++|+++
T Consensus 61 ~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~--~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~ 138 (380)
T 3iz6_a 61 TLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALT--SQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLS 138 (380)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTT--TEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECC
T ss_pred cccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCC--CccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECC
Confidence 4679999999999999999999999999999999743 3455666666666666666543
Q ss_pred -----------------------------CCCCEEEEeeCCCcEEEeecCCCCceEEeEEe-----ecCCCceeEEEecc
Q 036510 67 -----------------------------KFGSILASCSFDGTVIIWKEGNSNEWIKDHVF-----EDHKSSVNSIDWAP 112 (288)
Q Consensus 67 -----------------------------~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~-----~~h~~~v~~l~~~p 112 (288)
..+..|++|+.|++|++||+.++.. ...+ .+|...|.+++|+|
T Consensus 139 ~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~---~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 139 SQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQR---ISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp CCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCE---EEEECCCSSSSCCSCEEEEEECS
T ss_pred CCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcE---EEEeecccCCCCccCeEEEEeec
Confidence 0123455555555555555544331 2222 46888999999987
Q ss_pred CCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEE
Q 036510 113 HELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKL 192 (288)
Q Consensus 113 ~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~ 192 (288)
.+ +.++++|+.|++|++||++.... ......+|...|.++.|+|++ .+|++|+.|++|++||+
T Consensus 216 ~~-~~~l~sgs~D~~v~~wd~~~~~~--~~~~~~~h~~~v~~v~~~p~~--------------~~l~s~s~D~~i~lwd~ 278 (380)
T 3iz6_a 216 LN-ANMFISGSCDTTVRLWDLRITSR--AVRTYHGHEGDINSVKFFPDG--------------QRFGTGSDDGTCRLFDM 278 (380)
T ss_dssp SS-CCEEEEEETTSCEEEEETTTTCC--CCEEECCCSSCCCEEEECTTS--------------SEEEEECSSSCEEEEET
T ss_pred CC-CCEEEEEECCCeEEEEECCCCCc--ceEEECCcCCCeEEEEEecCC--------------CeEEEEcCCCeEEEEEC
Confidence 43 66899999999999999985432 234557899999999999987 78999999999999999
Q ss_pred eCCceeeeeeeccc-------cCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccc-eEeeccccCeEEE
Q 036510 193 YNGIWKMDCFPALQ-------MHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEG-KVLHDFKTPVYRV 264 (288)
Q Consensus 193 ~~~~~~~~~~~~~~-------~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~-~~~~~~~~~i~~~ 264 (288)
+++. ++..+. .+...|.+++|+|++ .+|++|+.|+.|++||+......... .....|.+.|.++
T Consensus 279 ~~~~----~~~~~~~~~~~~~~~~~~v~~~~~s~~g----~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l 350 (380)
T 3iz6_a 279 RTGH----QLQVYNREPDRNDNELPIVTSVAFSISG----RLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCL 350 (380)
T ss_dssp TTTE----EEEEECCCCSSSCCSSCSCSEEEECSSS----SEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEE
T ss_pred CCCc----EEEEecccccccccccCceEEEEECCCC----CEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEE
Confidence 8863 222222 233458999999984 78999999999999998643211000 1114577899999
Q ss_pred EeecCCCEEEEEeCCCcEEEeEc
Q 036510 265 SWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 265 ~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
+|+|||++|++|+.|++|+||++
T Consensus 351 ~~s~dg~~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 351 GLSSDGSALCTGSWDKNLKIWAF 373 (380)
T ss_dssp EECSSSSEEEEECTTSCEEEEEC
T ss_pred EECCCCCEEEEeeCCCCEEEEec
Confidence 99999999999999999999995
No 21
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.2e-39 Score=282.51 Aligned_cols=258 Identities=20% Similarity=0.291 Sum_probs=203.8
Q ss_pred ccccccccceEEEEE-----cC-CCCEEEEeeCCCcEEEEEeCCCC-----ceeeEEEeccccCeEEEEecCCCCCCEEE
Q 036510 5 KIETGHEDTVHDVAM-----DY-YGKRLATASSDYSIKIIGVGNNT-----SQHLAKLSGHKGAVWEVAWAHPKFGSILA 73 (288)
Q Consensus 5 ~~~~~h~~~v~~~~~-----s~-~g~~l~s~~~d~~i~lwd~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 73 (288)
..+.||++.|++++| ++ ++++|+||+.|++|++||+.... +.....+.+|...|.+++|+++ +.+|+
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~--~~~l~ 92 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQE--NCFAI 92 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSS--TTEEE
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCC--CCEEE
Confidence 356799999999999 76 89999999999999999986431 3456788999999999999864 88999
Q ss_pred EeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCee
Q 036510 74 SCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVT 153 (288)
Q Consensus 74 s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~ 153 (288)
+++.|++|++||++++. ....+.+|...|.+++|+|+ +.++++|+.|++|++||++.. ..........|...|.
T Consensus 93 s~s~D~~v~lwd~~~~~---~~~~~~~h~~~v~~v~~sp~--~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGT---TYKRFVGHQSEVYSVAFSPD--NRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVS 166 (343)
T ss_dssp EEETTSEEEEEETTSSC---EEEEEECCCSCEEEEEECSS--TTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEE
T ss_pred EEcCCCcEEEEECCCCc---EEEEEcCCCCcEEEEEECCC--CCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceee
Confidence 99999999999998765 44567889999999999998 668999999999999998732 1111111236888899
Q ss_pred EEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeC
Q 036510 154 SVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASE 233 (288)
Q Consensus 154 ~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~ 233 (288)
++.|+|+..... .......+|++++.|++|++||. .. +....+.+|...|.+++|+|++ ++|++|+.
T Consensus 167 ~~~~~~~~~~~~----~~~~~~~~l~s~~~d~~i~iwd~-~~----~~~~~~~~h~~~v~~~~~s~~g----~~l~sgs~ 233 (343)
T 2xzm_R 167 CVRYSPIMKSAN----KVQPFAPYFASVGWDGRLKVWNT-NF----QIRYTFKAHESNVNHLSISPNG----KYIATGGK 233 (343)
T ss_dssp EEEECCCCCSCS----CCCSSCCEEEEEETTSEEEEEET-TT----EEEEEEECCSSCEEEEEECTTS----SEEEEEET
T ss_pred eeeecccccccc----ccCCCCCEEEEEcCCCEEEEEcC-CC----ceeEEEcCccccceEEEECCCC----CEEEEEcC
Confidence 999999863211 11122367999999999999993 22 3455678899999999999984 78999999
Q ss_pred CCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 234 DGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 234 D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
|++|++||+...... ... ..+...|.+++|+|++++++++ .|+.|++|++
T Consensus 234 dg~v~iwd~~~~~~~--~~~-~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~ 283 (343)
T 2xzm_R 234 DKKLLIWDILNLTYP--QRE-FDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNL 283 (343)
T ss_dssp TCEEEEEESSCCSSC--SEE-EECSSCEEEEEECSSSCEEEEE-ESSCEEEEES
T ss_pred CCeEEEEECCCCccc--cee-ecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEe
Confidence 999999998533211 112 2234579999999999988755 6889999985
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.4e-40 Score=307.17 Aligned_cols=250 Identities=22% Similarity=0.329 Sum_probs=205.7
Q ss_pred ccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCC----Cc
Q 036510 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFD----GT 80 (288)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d----~~ 80 (288)
..+.+|++.|++++|+|+|++||||+.|++|+|||+..........+.+|...|.+++|+++ +++|++++.+ +.
T Consensus 53 ~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~d--g~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 53 EIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSE--SKRIAAVGEGRERFGH 130 (611)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTT--SCEEEEEECCSSCSEE
T ss_pred eEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCC--CCEEEEEECCCCceeE
Confidence 35679999999999999999999999999999999854444456778999999999999875 8899988876 47
Q ss_pred EEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCC
Q 036510 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160 (288)
Q Consensus 81 v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~ 160 (288)
|++||... ....+.+|...|++++|+|++ ...+++|+.|++|++||.+.. .......+|...|.+++|+|+
T Consensus 131 v~~wd~~~-----~~~~l~gh~~~v~~v~f~p~~-~~~l~s~s~D~~v~lwd~~~~---~~~~~l~~H~~~V~~v~fspd 201 (611)
T 1nr0_A 131 VFLFDTGT-----SNGNLTGQARAMNSVDFKPSR-PFRIISGSDDNTVAIFEGPPF---KFKSTFGEHTKFVHSVRYNPD 201 (611)
T ss_dssp EEETTTCC-----BCBCCCCCSSCEEEEEECSSS-SCEEEEEETTSCEEEEETTTB---EEEEEECCCSSCEEEEEECTT
T ss_pred EEEeeCCC-----CcceecCCCCCceEEEECCCC-CeEEEEEeCCCeEEEEECCCC---eEeeeeccccCceEEEEECCC
Confidence 89998532 234577899999999999984 346999999999999997643 233456789999999999998
Q ss_pred CCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccc-------cCCcceEEEEecCCCCCCCcEEEEEeC
Q 036510 161 TAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQ-------MHTDWVRDVAWAPNLGLPKSTIASASE 233 (288)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-------~h~~~V~~v~~sp~~~~~~~~l~s~s~ 233 (288)
+ ++|++++.|++|++||+.++. +...+. +|.+.|.+++|+|++ ++|++++.
T Consensus 202 g--------------~~las~s~D~~i~lwd~~~g~----~~~~~~~~~~~~~~h~~~V~~v~~spdg----~~l~s~s~ 259 (611)
T 1nr0_A 202 G--------------SLFASTGGDGTIVLYNGVDGT----KTGVFEDDSLKNVAHSGSVFGLTWSPDG----TKIASASA 259 (611)
T ss_dssp S--------------SEEEEEETTSCEEEEETTTCC----EEEECBCTTSSSCSSSSCEEEEEECTTS----SEEEEEET
T ss_pred C--------------CEEEEEECCCcEEEEECCCCc----EeeeeccccccccccCCCEEEEEECCCC----CEEEEEeC
Confidence 7 789999999999999987763 223332 799999999999984 78999999
Q ss_pred CCcEEEEEeecCCCcc----------------------------------------cceEeeccccCeEEEEeecCCCEE
Q 036510 234 DGKVIIWTVAREGDQW----------------------------------------EGKVLHDFKTPVYRVSWSLTGNIL 273 (288)
Q Consensus 234 D~~i~iw~~~~~~~~~----------------------------------------~~~~~~~~~~~i~~~~~spdg~~l 273 (288)
|++|++||+...+... ....+.+|...|++++|+|||++|
T Consensus 260 D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l 339 (611)
T 1nr0_A 260 DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTL 339 (611)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEE
Confidence 9999999986431100 011234677899999999999999
Q ss_pred EEEeCCCcEEEeEc
Q 036510 274 AVADGNNNVTLWEE 287 (288)
Q Consensus 274 ~s~~~d~~v~~w~~ 287 (288)
++++.|++|++||+
T Consensus 340 ~s~s~D~~v~~Wd~ 353 (611)
T 1nr0_A 340 FSADAEGHINSWDI 353 (611)
T ss_dssp EEEETTSCEEEEET
T ss_pred EEEeCCCcEEEEEC
Confidence 99999999999995
No 23
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.2e-39 Score=300.62 Aligned_cols=266 Identities=23% Similarity=0.311 Sum_probs=210.2
Q ss_pred cccccccceEEEEEcCCCC-EEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEe
Q 036510 6 IETGHEDTVHDVAMDYYGK-RLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW 84 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~-~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iw 84 (288)
.+.+|.+.|.+++|+|++. +|++|+.|++|++||.. ..+.+.++.+|...|++++|+++ +++|++++.|++|++|
T Consensus 142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~--~~~~~~~l~~H~~~V~~v~fspd--g~~las~s~D~~i~lw 217 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGP--PFKFKSTFGEHTKFVHSVRYNPD--GSLFASTGGDGTIVLY 217 (611)
T ss_dssp CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETT--TBEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEE
T ss_pred eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECC--CCeEeeeeccccCceEEEEECCC--CCEEEEEECCCcEEEE
Confidence 4569999999999999986 69999999999999974 45778889999999999999875 8999999999999999
Q ss_pred ecCCCCceEEeEEee-------cCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCee-----------------
Q 036510 85 KEGNSNEWIKDHVFE-------DHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWD----------------- 140 (288)
Q Consensus 85 d~~~~~~~~~~~~~~-------~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~----------------- 140 (288)
|..++. ....+. +|.+.|.+++|+|+ +.++++++.|++|++||++++....
T Consensus 218 d~~~g~---~~~~~~~~~~~~~~h~~~V~~v~~spd--g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (611)
T 1nr0_A 218 NGVDGT---KTGVFEDDSLKNVAHSGSVFGLTWSPD--GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW 292 (611)
T ss_dssp ETTTCC---EEEECBCTTSSSCSSSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE
T ss_pred ECCCCc---EeeeeccccccccccCCCEEEEEECCC--CCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEE
Confidence 987765 233442 69999999999998 6789999999999999987542211
Q ss_pred -----------------------eEEeeccCCCCeeEEEeCCCCCCCc-------e------------------------
Q 036510 141 -----------------------TSRIDQAHPVGVTSVSWAPSTAPGA-------L------------------------ 166 (288)
Q Consensus 141 -----------------------~~~~~~~~~~~v~~i~~~p~~~~~~-------~------------------------ 166 (288)
......+|...|.++.|+|++...+ +
T Consensus 293 ~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~ 372 (611)
T 1nr0_A 293 TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITG 372 (611)
T ss_dssp CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEE
T ss_pred cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEE
Confidence 1123457888899999998763100 0
Q ss_pred -------------------------------------------------------------------------------e
Q 036510 167 -------------------------------------------------------------------------------V 167 (288)
Q Consensus 167 -------------------------------------------------------------------------------~ 167 (288)
.
T Consensus 373 ~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~ 452 (611)
T 1nr0_A 373 IKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSS 452 (611)
T ss_dssp EEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEE
T ss_pred EEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCce
Confidence 0
Q ss_pred cccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCC
Q 036510 168 GSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGD 247 (288)
Q Consensus 168 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~ 247 (288)
...+.+++++|++|+.|++|++||+.++. ...... .+|...|.+|+|+|++ ++|++++.|++|++|++.....
T Consensus 453 ~va~spdg~~lasgs~D~~v~lwd~~~~~--~~~~~~-~~h~~~v~~v~fspdg----~~las~s~d~~v~~w~~~~~~~ 525 (611)
T 1nr0_A 453 CVALSNDKQFVAVGGQDSKVHVYKLSGAS--VSEVKT-IVHPAEITSVAFSNNG----AFLVATDQSRKVIPYSVANNFE 525 (611)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEEEETTE--EEEEEE-EECSSCEEEEEECTTS----SEEEEEETTSCEEEEEGGGTTE
T ss_pred EEEEeCCCCEEEEeCCCCeEEEEEccCCc--eeeeec-cCCCCceEEEEECCCC----CEEEEEcCCCCEEEEEcCCCCc
Confidence 01233457789999999999999998752 122233 6799999999999984 7899999999999999875221
Q ss_pred cccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 248 QWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 248 ~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
.........|...|++++|+|||++||+|+.|++|+||++
T Consensus 526 ~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~ 565 (611)
T 1nr0_A 526 LAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM 565 (611)
T ss_dssp ESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEEC
Confidence 1111112237789999999999999999999999999995
No 24
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1e-39 Score=284.85 Aligned_cols=252 Identities=17% Similarity=0.205 Sum_probs=195.2
Q ss_pred ccccccceEEEEEcCCCCEEEEeeC------CCcEEEEEeCCCC--ceeeEEEeccccCeEEEEecCCCCCCEEEEeeCC
Q 036510 7 ETGHEDTVHDVAMDYYGKRLATASS------DYSIKIIGVGNNT--SQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFD 78 (288)
Q Consensus 7 ~~~h~~~v~~~~~s~~g~~l~s~~~------d~~i~lwd~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d 78 (288)
..+|++.|++++|+|||++||+||. |+++++|+..... ........+|...|.+++|+++ + .+++++.|
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d--~-~~l~~s~d 114 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSE--K-GILVASDS 114 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETT--T-EEEEEETT
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCC--C-CEEEEECC
Confidence 3479999999999999999999997 6788999864321 2234455679999999999864 4 56778999
Q ss_pred CcEEEeecCCCCceE-EeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEe
Q 036510 79 GTVIIWKEGNSNEWI-KDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSW 157 (288)
Q Consensus 79 ~~v~iwd~~~~~~~~-~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~ 157 (288)
++|+|||+.++.... ......+|...|++++|+|+ +.++++|+.|++|++||++++. .....++|...|.++.|
T Consensus 115 g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spd--g~~l~sgs~dg~v~iwd~~~~~---~~~~~~~h~~~v~~v~~ 189 (357)
T 4g56_B 115 GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSD--GTQAVSGGKDFSVKVWDLSQKA---VLKSYNAHSSEVNCVAA 189 (357)
T ss_dssp SCEEEC--------CCCCEEECCCSSCEEEEEECSS--SSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEE
T ss_pred CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCC--CCEEEEEeCCCeEEEEECCCCc---EEEEEcCCCCCEEEEEE
Confidence 999999987654321 12234579999999999998 6789999999999999998653 34456789999999999
Q ss_pred CCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcE
Q 036510 158 APSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKV 237 (288)
Q Consensus 158 ~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i 237 (288)
+|++. .++++++.|++|++||++++... ....+..|...|.+++|+|+. +.+|++|+.|+.|
T Consensus 190 s~~~~-------------~~~~s~~~dg~v~~wd~~~~~~~--~~~~~~~~~~~v~~v~~sp~~---~~~la~g~~d~~i 251 (357)
T 4g56_B 190 CPGKD-------------TIFLSCGEDGRILLWDTRKPKPA--TRIDFCASDTIPTSVTWHPEK---DDTFACGDETGNV 251 (357)
T ss_dssp CTTCS-------------SCEEEEETTSCEEECCTTSSSCB--CBCCCTTCCSCEEEEEECTTS---TTEEEEEESSSCE
T ss_pred ccCCC-------------ceeeeeccCCceEEEECCCCcee--eeeeeccccccccchhhhhcc---cceEEEeecccce
Confidence 99863 57899999999999999876311 112334577789999999975 4689999999999
Q ss_pred EEEEeecCCCcccceEeeccccCeEEEEeecCC-CEEEEEeCCCcEEEeEc
Q 036510 238 IIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTG-NILAVADGNNNVTLWEE 287 (288)
Q Consensus 238 ~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg-~~l~s~~~d~~v~~w~~ 287 (288)
++||++... ....+..+...|++++|+|+| ++||+|+.|++|+|||.
T Consensus 252 ~~wd~~~~~---~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~ 299 (357)
T 4g56_B 252 SLVNIKNPD---SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDA 299 (357)
T ss_dssp EEEESSCGG---GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECT
T ss_pred eEEECCCCc---EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEEC
Confidence 999987532 234556778899999999998 57999999999999995
No 25
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=9.8e-39 Score=274.04 Aligned_cols=272 Identities=31% Similarity=0.558 Sum_probs=213.6
Q ss_pred CCccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCC--ceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCc
Q 036510 3 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNT--SQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGT 80 (288)
Q Consensus 3 ~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~ 80 (288)
.+.++.+|++.|++++|+|+|++|++|+.|++|++|++.... .+....+.+|...|.+++|++..++.+|++++.|++
T Consensus 3 ~~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 3 MQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CCCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred ccccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 456778999999999999999999999999999999996432 245777889999999999986324789999999999
Q ss_pred EEEeecCCCC------ceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEe----------
Q 036510 81 VIIWKEGNSN------EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRI---------- 144 (288)
Q Consensus 81 v~iwd~~~~~------~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~---------- 144 (288)
|++||+..+. .+.....+..|...|.+++|+|+..+.++++++.|+.|++||+++.........
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence 9999997642 123456677899999999999974356799999999999999987543221110
Q ss_pred eccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCC
Q 036510 145 DQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLP 224 (288)
Q Consensus 145 ~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~ 224 (288)
...|...+.++.|+|+... ..++++++.|+.+.+|+...+. ...+..+.+|...|.+++|+|+....
T Consensus 163 ~~~~~~~~~~~~~~p~~~~-----------~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~h~~~i~~~~~~p~~~~~ 229 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFS-----------PEKLAVSALEQAIIYQRGKDGK--LHVAAKLPGHKSLIRSISWAPSIGRW 229 (351)
T ss_dssp CSSCSCCCEEEEECCCSSS-----------CCEEEEEETTEEEEEEECTTSC--EEEEEECCCCCSCEEEEEECCCSSCS
T ss_pred cCCcccceeEEEeccCCCC-----------CcEEEEecCCCcEEEEccCCCc--eeeeeecCCCCcceeEEEECCCCCCc
Confidence 1256778999999997211 2679999999999777765542 23456778899999999999984111
Q ss_pred CcEEEEEeCCCcEEEEEeecCCCc-------------------------------------------ccceEeeccccCe
Q 036510 225 KSTIASASEDGKVIIWTVAREGDQ-------------------------------------------WEGKVLHDFKTPV 261 (288)
Q Consensus 225 ~~~l~s~s~D~~i~iw~~~~~~~~-------------------------------------------~~~~~~~~~~~~i 261 (288)
..+|++|+.|+.|++||++..... .....+..|..+|
T Consensus 230 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 309 (351)
T 3f3f_A 230 YQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEV 309 (351)
T ss_dssp SEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCE
T ss_pred ceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccE
Confidence 168999999999999999863110 1112234567899
Q ss_pred EEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 262 YRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 262 ~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
++++|+|+|++|++|+.|++|+||++
T Consensus 310 ~~~~~s~~~~~l~s~~~dg~v~iw~~ 335 (351)
T 3f3f_A 310 WSVSWNLTGTILSSAGDDGKVRLWKA 335 (351)
T ss_dssp EEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred EEEEEcCCCCEEEEecCCCcEEEEec
Confidence 99999999999999999999999995
No 26
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.3e-39 Score=276.31 Aligned_cols=253 Identities=20% Similarity=0.267 Sum_probs=200.0
Q ss_pred cccccccceEEEEEcCC-CCEEEEeeCCCcEEEEEeCCCC---ceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcE
Q 036510 6 IETGHEDTVHDVAMDYY-GKRLATASSDYSIKIIGVGNNT---SQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTV 81 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~-g~~l~s~~~d~~i~lwd~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v 81 (288)
.+.||++.|++|+|+|+ +++|+|||.|++|+|||+.... ..+...+.+|...|.+++|+++ +++|++++.|+.|
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d--g~~l~s~~~d~~i 110 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD--GQFALSGSWDGTL 110 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC--CCEEEEEcccccc
Confidence 46799999999999997 6899999999999999986432 3456788999999999999864 8899999999999
Q ss_pred EEeecCCCCc----------------------------------------eEEeEEeecCCCceeEEEeccCCCCeEEEE
Q 036510 82 IIWKEGNSNE----------------------------------------WIKDHVFEDHKSSVNSIDWAPHELGLCLAC 121 (288)
Q Consensus 82 ~iwd~~~~~~----------------------------------------~~~~~~~~~h~~~v~~l~~~p~~~~~~l~s 121 (288)
++|+...... .........|...+.+++|+++....++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 190 (340)
T 4aow_A 111 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 190 (340)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEE
T ss_pred eEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEE
Confidence 9998643210 000112335788899999999876778899
Q ss_pred EeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeee
Q 036510 122 GSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDC 201 (288)
Q Consensus 122 g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 201 (288)
++.|+.|++||++... ......+|...|.++.|+|++ ++|++|+.|++|++||+++. ++
T Consensus 191 ~~~d~~i~i~d~~~~~---~~~~~~~h~~~v~~~~~s~~~--------------~~l~s~s~Dg~i~iwd~~~~----~~ 249 (340)
T 4aow_A 191 CGWDKLVKVWNLANCK---LKTNHIGHTGYLNTVTVSPDG--------------SLCASGGKDGQAMLWDLNEG----KH 249 (340)
T ss_dssp EETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECTTS--------------SEEEEEETTCEEEEEETTTT----EE
T ss_pred EcCCCEEEEEECCCCc---eeeEecCCCCcEEEEEECCCC--------------CEEEEEeCCCeEEEEEeccC----ce
Confidence 9999999999998653 334567899999999999987 78999999999999999875 33
Q ss_pred eeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCc------ccceEeeccccCeEEEEeecCCCEEEE
Q 036510 202 FPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQ------WEGKVLHDFKTPVYRVSWSLTGNILAV 275 (288)
Q Consensus 202 ~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~------~~~~~~~~~~~~i~~~~~spdg~~l~s 275 (288)
+..+. +...|.++.|+|+ .++++++.|+.|++||++..... ........+...|++++|+|||++|++
T Consensus 250 ~~~~~-~~~~v~~~~~~~~-----~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s 323 (340)
T 4aow_A 250 LYTLD-GGDIINALCFSPN-----RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA 323 (340)
T ss_dssp EEEEE-CSSCEEEEEECSS-----SSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEE
T ss_pred eeeec-CCceEEeeecCCC-----CceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEE
Confidence 44444 3457999999997 35788889999999998643110 001112345678999999999999999
Q ss_pred EeCCCcEEEeEc
Q 036510 276 ADGNNNVTLWEE 287 (288)
Q Consensus 276 ~~~d~~v~~w~~ 287 (288)
|+.||+|+|||+
T Consensus 324 gs~Dg~v~iW~~ 335 (340)
T 4aow_A 324 GYTDNLVRVWQV 335 (340)
T ss_dssp EETTSCEEEEEE
T ss_pred EeCCCEEEEEeC
Confidence 999999999996
No 27
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.7e-39 Score=273.92 Aligned_cols=248 Identities=21% Similarity=0.284 Sum_probs=203.6
Q ss_pred ccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeec
Q 036510 7 ETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE 86 (288)
Q Consensus 7 ~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~ 86 (288)
+.+|+..|.+++|+|++++|++|+.|++|++||+.. ++.+..+.+|.+.|++++|+++ +.+|++|+.|++|++||+
T Consensus 51 ~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~--~~~~~~~~~h~~~v~~~~~~~~--~~~l~sgs~D~~v~lWd~ 126 (304)
T 2ynn_A 51 IQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT--GEKVVDFEAHPDYIRSIAVHPT--KPYVLSGSDDLTVKLWNW 126 (304)
T ss_dssp EECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT--CCEEEEEECCSSCEEEEEECSS--SSEEEEEETTSCEEEEEG
T ss_pred eeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCC--CcEEEEEeCCCCcEEEEEEcCC--CCEEEEECCCCeEEEEEC
Confidence 457899999999999999999999999999999854 4678889999999999999864 789999999999999999
Q ss_pred CCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCce
Q 036510 87 GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL 166 (288)
Q Consensus 87 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~ 166 (288)
+++.. ....+.+|...|.+++|+|.+ +.++++|+.|++|++||++..... .....+|...+..+.|+|...
T Consensus 127 ~~~~~--~~~~~~~h~~~v~~v~~~p~~-~~~l~sgs~D~~v~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~---- 197 (304)
T 2ynn_A 127 ENNWA--LEQTFEGHEHFVMCVAFNPKD-PSTFASGCLDRTVKVWSLGQSTPN--FTLTTGQERGVNYVDYYPLPD---- 197 (304)
T ss_dssp GGTTE--EEEEECCCCSCEEEEEECTTC-TTEEEEEETTSEEEEEETTCSSCS--EEEECCCTTCEEEEEECCSTT----
T ss_pred CCCcc--hhhhhcccCCcEEEEEECCCC-CCEEEEEeCCCeEEEEECCCCCcc--ceeccCCcCcEEEEEEEEcCC----
Confidence 76532 345678899999999999953 567999999999999999765432 233345667899999987431
Q ss_pred ecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCC
Q 036510 167 VGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREG 246 (288)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~ 246 (288)
+.+|++|+.|++|++||++++ +++..+.+|...|.++.|+|+. .+|++|+.|++|++||++..+
T Consensus 198 --------~~~l~s~s~D~~i~iWd~~~~----~~~~~~~~h~~~v~~~~~~p~~----~~l~s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 198 --------KPYMITASDDLTIKIWDYQTK----SCVATLEGHMSNVSFAVFHPTL----PIIISGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp --------CCEEEEEETTSEEEEEETTTT----EEEEEEECCSSCEEEEEECSSS----SEEEEEETTSCEEEEETTTCC
T ss_pred --------CCEEEEEcCCCeEEEEeCCCC----ccceeeCCCCCCEEEEEECCCC----CEEEEEcCCCeEEEEECCCCc
Confidence 268999999999999999876 4667889999999999999984 689999999999999987532
Q ss_pred CcccceEeeccccCeEEEEeecCCC--EEEEEeCCCcEEEeEc
Q 036510 247 DQWEGKVLHDFKTPVYRVSWSLTGN--ILAVADGNNNVTLWEE 287 (288)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~~~spdg~--~l~s~~~d~~v~~w~~ 287 (288)
....+..+...+.+++|+|+|. ++++|+. +.+.+|++
T Consensus 262 ---~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~-~g~~~~~~ 300 (304)
T 2ynn_A 262 ---VEKTLNVGLERSWCIATHPTGRKNYIASGFD-NGFTVLSL 300 (304)
T ss_dssp ---EEEEECCSSSSEEEEEECTTCGGGCEEEEET-TEEEEEEC
T ss_pred ---eeeeccCCCccEEEEEECCCCCceEEEEecC-CceEEEEe
Confidence 2234455667899999999985 4677655 45557764
No 28
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.8e-39 Score=278.32 Aligned_cols=250 Identities=17% Similarity=0.274 Sum_probs=196.5
Q ss_pred ccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEe
Q 036510 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW 84 (288)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iw 84 (288)
+.+.+|...|.+++|+|++++|++|+.|++|++||+.. ++.+..+.+|...|++++|+++ +.+|++++.|++|++|
T Consensus 70 ~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~--~~~~~~~~~h~~~v~~v~~sp~--~~~l~s~~~d~~i~~w 145 (343)
T 2xzm_R 70 KALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRT--GTTYKRFVGHQSEVYSVAFSPD--NRQILSAGAEREIKLW 145 (343)
T ss_dssp EEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTS--SCEEEEEECCCSCEEEEEECSS--TTEEEEEETTSCEEEE
T ss_pred chhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC--CcEEEEEcCCCCcEEEEEECCC--CCEEEEEcCCCEEEEE
Confidence 34679999999999999999999999999999999854 3678889999999999999864 8899999999999999
Q ss_pred ecCCCCceEEeEEeecCCCceeEEEeccCCC--------CeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEE
Q 036510 85 KEGNSNEWIKDHVFEDHKSSVNSIDWAPHEL--------GLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVS 156 (288)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~--------~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 156 (288)
|+.. ...........|...|.+++|+|+.. +.++++++.|+.|++||.+. .......+|...|.++.
T Consensus 146 d~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----~~~~~~~~h~~~v~~~~ 220 (343)
T 2xzm_R 146 NILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF----QIRYTFKAHESNVNHLS 220 (343)
T ss_dssp ESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT----EEEEEEECCSSCEEEEE
T ss_pred eccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC----ceeEEEcCccccceEEE
Confidence 9863 21111111236888999999999742 25799999999999999432 23345578999999999
Q ss_pred eCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCc
Q 036510 157 WAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGK 236 (288)
Q Consensus 157 ~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~ 236 (288)
|+|++ ++|++|+.|+.|++||+..... ....+ .+...|.+++|+|+. . +++++.|+.
T Consensus 221 ~s~~g--------------~~l~sgs~dg~v~iwd~~~~~~---~~~~~-~~~~~v~~v~~sp~~----~-~la~~~d~~ 277 (343)
T 2xzm_R 221 ISPNG--------------KYIATGGKDKKLLIWDILNLTY---PQREF-DAGSTINQIAFNPKL----Q-WVAVGTDQG 277 (343)
T ss_dssp ECTTS--------------SEEEEEETTCEEEEEESSCCSS---CSEEE-ECSSCEEEEEECSSS----C-EEEEEESSC
T ss_pred ECCCC--------------CEEEEEcCCCeEEEEECCCCcc---cceee-cCCCcEEEEEECCCC----C-EEEEECCCC
Confidence 99987 7899999999999999854321 11122 245569999999974 3 455667889
Q ss_pred EEEEEeecCCCcccceEe-----------eccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 237 VIIWTVAREGDQWEGKVL-----------HDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 237 i~iw~~~~~~~~~~~~~~-----------~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
|++|++....... ...+ .++...|.+++|+|+|++|++|+.||+|++|+.
T Consensus 278 v~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 278 VKIFNLMTQSKAP-VCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSF 338 (343)
T ss_dssp EEEEESSSCCSCS-EEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEE
T ss_pred EEEEEeCCCCCCc-eEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEE
Confidence 9999986532211 0011 145668999999999999999999999999995
No 29
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.9e-40 Score=288.15 Aligned_cols=262 Identities=18% Similarity=0.264 Sum_probs=204.4
Q ss_pred CCCCccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCc
Q 036510 1 MPPQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGT 80 (288)
Q Consensus 1 ~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~ 80 (288)
|+.+.+...|.+.|.+++|+|+|++|++|+.|++|++|++.....+.+..+.+|...|++++|+++ +++|++++.|++
T Consensus 1 m~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~s~d~~ 78 (377)
T 3dwl_C 1 MATSQVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPK--SNRIVTCSQDRN 78 (377)
T ss_dssp -CCEEEEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTT--TCCEEEEETTSS
T ss_pred CCcceeEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCC--CCEEEEEeCCCe
Confidence 777777777889999999999999999999999999999965433567888999999999999865 789999999999
Q ss_pred EEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeecc-CCCCeeEEEeCC
Q 036510 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQA-HPVGVTSVSWAP 159 (288)
Q Consensus 81 v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~v~~i~~~p 159 (288)
|++||+.++..+.....+..|...|.+++|+|+ +.++++|+.|+.|++||++.+..+........ |...|.++.|+|
T Consensus 79 v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 156 (377)
T 3dwl_C 79 AYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN--EDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP 156 (377)
T ss_dssp EEEC------CCCCEEECCCCSSCEEEEECCTT--SSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT
T ss_pred EEEEEcCCCCceeeeeEecccCCceEEEEECCC--CCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC
Confidence 999999765423334556789999999999997 56789999999999999987653333344455 999999999999
Q ss_pred CCCCCceecccccCCCceeEEeecCCcEEEEEEeCCc--------------eeeeeeeccccCCcceEEEEecCCCCCCC
Q 036510 160 STAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGI--------------WKMDCFPALQMHTDWVRDVAWAPNLGLPK 225 (288)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--------------~~~~~~~~~~~h~~~V~~v~~sp~~~~~~ 225 (288)
++ ++|++++.|++|++||+.... ...+++..+ +|...|.+++|+|++
T Consensus 157 ~~--------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~---- 217 (377)
T 3dwl_C 157 NN--------------VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSG---- 217 (377)
T ss_dssp TS--------------SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTS----
T ss_pred CC--------------CEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCC----
Confidence 87 789999999999999995321 112345556 899999999999984
Q ss_pred cEEEEEeCCCcEEEEEeecCCCcc-cceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 226 STIASASEDGKVIIWTVAREGDQW-EGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 226 ~~l~s~s~D~~i~iw~~~~~~~~~-~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
.+|++++.|++|++||+.....+. ....+..|..+|.+++|+|+|++|++|+.|+.+ +|+
T Consensus 218 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~ 278 (377)
T 3dwl_C 218 NALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQ 278 (377)
T ss_dssp SCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EEC
T ss_pred CEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEE
Confidence 689999999999999998653211 023445677899999999999999999766666 665
No 30
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.9e-38 Score=278.96 Aligned_cols=247 Identities=26% Similarity=0.349 Sum_probs=200.2
Q ss_pred ccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCC
Q 036510 11 EDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN 90 (288)
Q Consensus 11 ~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~ 90 (288)
...|.+++|+|+|++|++|+.|++|++||+.. .+.+..+.+|...|++++|+++ +.+|++++.|++|++||++++.
T Consensus 123 ~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~--~~~~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~v~iwd~~~~~ 198 (393)
T 1erj_A 123 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN--RKIVMILQGHEQDIYSLDYFPS--GDKLVSGSGDRTVRIWDLRTGQ 198 (393)
T ss_dssp CCBEEEEEECTTSSEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTE
T ss_pred ceeEEEEEECCCCCEEEEEcCCCeEEEEECCC--CcEEEEEccCCCCEEEEEEcCC--CCEEEEecCCCcEEEEECCCCe
Confidence 34599999999999999999999999999854 4678889999999999999864 8899999999999999998754
Q ss_pred ceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEE----eeccCCCCeeEEEeCCCCCCCce
Q 036510 91 EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSR----IDQAHPVGVTSVSWAPSTAPGAL 166 (288)
Q Consensus 91 ~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~----~~~~~~~~v~~i~~~p~~~~~~~ 166 (288)
....+. +...+.+++|+|.+ +.++++|+.|+.|++||++.+....... ...+|...|.++.|+|++
T Consensus 199 ---~~~~~~-~~~~v~~~~~~~~~-~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g----- 268 (393)
T 1erj_A 199 ---CSLTLS-IEDGVTTVAVSPGD-GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG----- 268 (393)
T ss_dssp ---EEEEEE-CSSCEEEEEECSTT-CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTS-----
T ss_pred ---eEEEEE-cCCCcEEEEEECCC-CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCC-----
Confidence 223343 56789999999943 6789999999999999998754322111 124788899999999987
Q ss_pred ecccccCCCceeEEeecCCcEEEEEEeCCce--------eeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEE
Q 036510 167 VGSGFLDPVQKLCSGGCDNTVKVWKLYNGIW--------KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVI 238 (288)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--------~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~ 238 (288)
++|++|+.|++|++||++.... ...+...+.+|...|.+++|+|+. .+|++|+.|++|+
T Consensus 269 ---------~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----~~l~sgs~D~~v~ 335 (393)
T 1erj_A 269 ---------QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND----EYILSGSKDRGVL 335 (393)
T ss_dssp ---------SEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG----CEEEEEETTSEEE
T ss_pred ---------CEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCC----CEEEEEeCCCeEE
Confidence 7899999999999999875321 112345667899999999999974 6899999999999
Q ss_pred EEEeecCCCcccceEeeccccCeEEEEeec------CCCEEEEEeCCCcEEEeEc
Q 036510 239 IWTVAREGDQWEGKVLHDFKTPVYRVSWSL------TGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 239 iw~~~~~~~~~~~~~~~~~~~~i~~~~~sp------dg~~l~s~~~d~~v~~w~~ 287 (288)
+||++... ....+.+|.+.|.+++|+| ++++|++|+.|++|+||+.
T Consensus 336 iwd~~~~~---~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 336 FWDKKSGN---PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp EEETTTCC---EEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred EEECCCCe---EEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 99987532 2245567888999999886 7899999999999999995
No 31
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.8e-38 Score=277.03 Aligned_cols=248 Identities=22% Similarity=0.331 Sum_probs=193.8
Q ss_pred ccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEecccc------------------CeEEEEecCCCCCC
Q 036510 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKG------------------AVWEVAWAHPKFGS 70 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~------------------~v~~~~~~~~~~~~ 70 (288)
+|...|.+++|+|+|++|++|+ |+++++|++..+ +.+..+.+|.. .|.+++|+++ ++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d--g~ 136 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDG--SLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD--GK 136 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTC--CEEEEECC-----------------CCCCBEEEEEECTT--SS
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCC--CEEEEecCccccccccccccccccCCCceeEEEEEECCC--CC
Confidence 6999999999999999999876 789999998543 45555655432 3899999864 89
Q ss_pred EEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCC
Q 036510 71 ILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPV 150 (288)
Q Consensus 71 ~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 150 (288)
+|++|+.|++|++||+.++. ....+.+|...|.+++|+|+ +.++++|+.|++|++||++++... .. ..+..
T Consensus 137 ~l~s~~~d~~i~iwd~~~~~---~~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~v~iwd~~~~~~~---~~-~~~~~ 207 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENRK---IVMILQGHEQDIYSLDYFPS--GDKLVSGSGDRTVRIWDLRTGQCS---LT-LSIED 207 (393)
T ss_dssp EEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEEE---EE-EECSS
T ss_pred EEEEEcCCCeEEEEECCCCc---EEEEEccCCCCEEEEEEcCC--CCEEEEecCCCcEEEEECCCCeeE---EE-EEcCC
Confidence 99999999999999997654 45567889999999999998 567999999999999999865321 11 13556
Q ss_pred CeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeee---eeccccCCcceEEEEecCCCCCCCcE
Q 036510 151 GVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDC---FPALQMHTDWVRDVAWAPNLGLPKST 227 (288)
Q Consensus 151 ~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~---~~~~~~h~~~V~~v~~sp~~~~~~~~ 227 (288)
.+.++.|+|.. +++|++|+.|++|++||++++...... .....+|...|.+++|+|++ .+
T Consensus 208 ~v~~~~~~~~~-------------~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g----~~ 270 (393)
T 1erj_A 208 GVTTVAVSPGD-------------GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG----QS 270 (393)
T ss_dssp CEEEEEECSTT-------------CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTS----SE
T ss_pred CcEEEEEECCC-------------CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCC----CE
Confidence 79999999943 278999999999999998776321111 01225799999999999984 78
Q ss_pred EEEEeCCCcEEEEEeecCCCc---------ccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 228 IASASEDGKVIIWTVAREGDQ---------WEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 228 l~s~s~D~~i~iw~~~~~~~~---------~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
|++|+.|++|++||++..... .....+.+|...|.+++|+|++++|++|+.|++|++||.
T Consensus 271 l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~ 339 (393)
T 1erj_A 271 VVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK 339 (393)
T ss_dssp EEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred EEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 999999999999998753211 011234567788999999999999999999999999995
No 32
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8.3e-38 Score=266.99 Aligned_cols=245 Identities=23% Similarity=0.371 Sum_probs=201.1
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
.+.+|.+.|.+++|+|+|++|++|+.|++|++|+... ++....+.+|...|.+++|+++ +++|++++.|+.|++||
T Consensus 18 ~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~--~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD--GKFEKTISGHKLGISDVAWSSD--SNLLVSASDDKTLKIWD 93 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--CCEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEE
T ss_pred EEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCC--cccchhhccCCCceEEEEEcCC--CCEEEEECCCCEEEEEE
Confidence 4569999999999999999999999999999999854 3567788999999999999864 89999999999999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCc
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGA 165 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~ 165 (288)
+.++. ....+.+|...|.+++|+|+ +.++++|+.|+.|++||++++.. ......|...|.++.|+|++
T Consensus 94 ~~~~~---~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~~---- 161 (312)
T 4ery_A 94 VSSGK---CLKTLKGHSNYVFCCNFNPQ--SNLIVSGSFDESVRIWDVKTGKC---LKTLPAHSDPVSAVHFNRDG---- 161 (312)
T ss_dssp TTTCC---EEEEEECCSSCEEEEEECSS--SSEEEEEETTSCEEEEETTTCCE---EEEECCCSSCEEEEEECTTS----
T ss_pred CCCCc---EEEEEcCCCCCEEEEEEcCC--CCEEEEEeCCCcEEEEECCCCEE---EEEecCCCCcEEEEEEcCCC----
Confidence 98765 45567889999999999997 67899999999999999986532 34456788899999999987
Q ss_pred eecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeec-cccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeec
Q 036510 166 LVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPA-LQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAR 244 (288)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~ 244 (288)
.+|++++.|+.|++||++++. .+.. ...|...|..++|+|++ .+|++++.|+.|++||++.
T Consensus 162 ----------~~l~~~~~d~~i~~wd~~~~~----~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~d~~i~iwd~~~ 223 (312)
T 4ery_A 162 ----------SLIVSSSYDGLCRIWDTASGQ----CLKTLIDDDNPPVSFVKFSPNG----KYILAATLDNTLKLWDYSK 223 (312)
T ss_dssp ----------SEEEEEETTSCEEEEETTTCC----EEEEECCSSCCCEEEEEECTTS----SEEEEEETTTEEEEEETTT
T ss_pred ----------CEEEEEeCCCcEEEEECCCCc----eeeEEeccCCCceEEEEECCCC----CEEEEEcCCCeEEEEECCC
Confidence 789999999999999998763 2222 24566789999999984 7899999999999999875
Q ss_pred CCCcccceEeeccccC--eEEEEee-cCCCEEEEEeCCCcEEEeEc
Q 036510 245 EGDQWEGKVLHDFKTP--VYRVSWS-LTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 245 ~~~~~~~~~~~~~~~~--i~~~~~s-pdg~~l~s~~~d~~v~~w~~ 287 (288)
.. ....+..+... .....|+ +++++|++|+.|++|++||+
T Consensus 224 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~ 266 (312)
T 4ery_A 224 GK---CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 266 (312)
T ss_dssp TE---EEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEET
T ss_pred Cc---EEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEEC
Confidence 31 12233334332 2233444 68899999999999999995
No 33
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-38 Score=302.00 Aligned_cols=280 Identities=46% Similarity=0.813 Sum_probs=218.5
Q ss_pred CccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEE
Q 036510 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83 (288)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~i 83 (288)
..++.+|++.|++++|+|+|++|++|+.|++|++|++..+..+.+..+.+|.+.|++++|+++.++++|++|+.||+|++
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 34678999999999999999999999999999999997556677888999999999999987655899999999999999
Q ss_pred eecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCC
Q 036510 84 WKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163 (288)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~ 163 (288)
||+.++. +.....+..|...|.+++|+|+..+.++++|+.||.|++||++...... .....+|...|.++.|+|....
T Consensus 82 wd~~~~~-~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~-~~~~~~~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 82 WKEENGR-WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATIE 159 (753)
T ss_dssp EEEETTE-EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCC-CEEEECCSSCEEEEEECCCC--
T ss_pred EECCCCc-ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcc-eeEeecCCCceEEEEecCcccc
Confidence 9997643 3345567789999999999997445689999999999999998763322 2344678999999999995210
Q ss_pred CceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEee
Q 036510 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243 (288)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~ 243 (288)
.... .....++..+++|+.|+.|++||++++.....+...+.+|...|.+++|+|+.. .+.+|++|+.|+.|++||+.
T Consensus 160 ~~~~-~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~-~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 160 EDGE-HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL-LRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp --------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS-SSEEEEEEESSSCEEEEEES
T ss_pred cccc-cccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCC-CCCEEEEEecCCEEEEecCC
Confidence 0000 000112378999999999999999987544456667789999999999999720 03789999999999999998
Q ss_pred cCCCcccce--EeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 244 REGDQWEGK--VLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 244 ~~~~~~~~~--~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
......... ....+...|++++|+|+|++|++|+.||.|+||+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~ 283 (753)
T 3jro_A 238 NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (753)
T ss_dssp SSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBC
T ss_pred CCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEec
Confidence 643221111 12346678999999999999999999999999985
No 34
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.6e-37 Score=263.93 Aligned_cols=247 Identities=23% Similarity=0.365 Sum_probs=204.1
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
.+.+|...|.+++|+|++++|++|+.|++|++||+.. .+.+..+.+|...|.+++|+++ +.+|++++.|++|++||
T Consensus 60 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~i~iwd 135 (312)
T 4ery_A 60 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS--GKCLKTLKGHSNYVFCCNFNPQ--SNLIVSGSFDESVRIWD 135 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT--CCEEEEEECCSSCEEEEEECSS--SSEEEEEETTSCEEEEE
T ss_pred hhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC--CcEEEEEcCCCCCEEEEEEcCC--CCEEEEEeCCCcEEEEE
Confidence 4568999999999999999999999999999999854 3668889999999999999864 88999999999999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCc
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGA 165 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~ 165 (288)
++++. ....+..|..+|.++.|+|+ +.++++|+.|+.|++||++.+... ......+...+..+.|+|++
T Consensus 136 ~~~~~---~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~---- 204 (312)
T 4ery_A 136 VKTGK---CLKTLPAHSDPVSAVHFNRD--GSLIVSSSYDGLCRIWDTASGQCL--KTLIDDDNPPVSFVKFSPNG---- 204 (312)
T ss_dssp TTTCC---EEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTCCEE--EEECCSSCCCEEEEEECTTS----
T ss_pred CCCCE---EEEEecCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEEECCCCcee--eEEeccCCCceEEEEECCCC----
Confidence 98765 44567789999999999997 668999999999999999875422 22334566779999999987
Q ss_pred eecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceE--EEEecCCCCCCCcEEEEEeCCCcEEEEEee
Q 036510 166 LVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVR--DVAWAPNLGLPKSTIASASEDGKVIIWTVA 243 (288)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~--~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~ 243 (288)
++|++++.|+.|++||++++ +++..+.+|...+. ...|++.. +.+|++|+.|+.|++||++
T Consensus 205 ----------~~l~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 205 ----------KYILAATLDNTLKLWDYSKG----KCLKTYTGHKNEKYCIFANFSVTG---GKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp ----------SEEEEEETTTEEEEEETTTT----EEEEEECSSCCSSSCCCEEEECSS---SCEEEECCTTSCEEEEETT
T ss_pred ----------CEEEEEcCCCeEEEEECCCC----cEEEEEEecCCceEEEEEEEEeCC---CcEEEEECCCCEEEEEECC
Confidence 78999999999999999876 34555666765432 23455432 4689999999999999987
Q ss_pred cCCCcccceEeeccccCeEEEEeecCCCEEEEEe--CCCcEEEeEc
Q 036510 244 REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVAD--GNNNVTLWEE 287 (288)
Q Consensus 244 ~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~--~d~~v~~w~~ 287 (288)
... ....+.+|...|.+++|+|++++|++++ .|++|+||+.
T Consensus 268 ~~~---~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 268 TKE---IVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp TCC---EEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred Cch---hhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 542 2345567888999999999999999997 6999999985
No 35
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.2e-37 Score=286.79 Aligned_cols=239 Identities=31% Similarity=0.497 Sum_probs=205.8
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
.+.+|...|.+++|+|+|++|++++.|+++++|+.+ .+.+..+.+|...|.+++|+++ +++|++++.|++|++||
T Consensus 339 ~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~---~~~~~~~~~~~~~v~~~~~s~d--g~~l~~~~~d~~v~~~~ 413 (577)
T 2ymu_A 339 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN---GQLLQTLTGHSSSVRGVAFSPD--GQTIASASDDKTVKLWN 413 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT---CCEEEEEECCSSCEEEEEECTT--SSCEEEEETTSEEEEEC
T ss_pred EEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC---CCEEEEecCCCCCeEEEEECCC--CCEEEEEeCCCEEEEEe
Confidence 346899999999999999999999999999999964 3567889999999999999865 89999999999999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCc
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGA 165 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~ 165 (288)
.. +. ....+.+|...|++++|+|+ +.++++++.|+.|++|+... .......+|...|.++.|+|++
T Consensus 414 ~~-~~---~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d~~v~~w~~~~----~~~~~~~~~~~~v~~~~~spd~---- 479 (577)
T 2ymu_A 414 RN-GQ---LLQTLTGHSSSVWGVAFSPD--DQTIASASDDKTVKLWNRNG----QLLQTLTGHSSSVRGVAFSPDG---- 479 (577)
T ss_dssp TT-CC---EEEEEECCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTS----CEEEEEECCSSCEEEEEECTTS----
T ss_pred CC-CC---EEEEecCCCCCeEEEEECCC--CCEEEEEcCCCEEEEEECCC----CEEEEEcCCCCCEEEEEEcCCC----
Confidence 63 33 44567889999999999998 56899999999999999632 2234556899999999999987
Q ss_pred eecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecC
Q 036510 166 LVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245 (288)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~ 245 (288)
++|++++.|++|++||. ++ +++..+.+|...|++++|+|++ ++||+++.|+.|++||...
T Consensus 480 ----------~~las~~~d~~i~iw~~-~~----~~~~~~~~h~~~v~~l~~s~dg----~~l~s~~~dg~v~lwd~~~- 539 (577)
T 2ymu_A 480 ----------QTIASASDDKTVKLWNR-NG----QLLQTLTGHSSSVRGVAFSPDG----QTIASASDDKTVKLWNRNG- 539 (577)
T ss_dssp ----------CEEEEEETTSEEEEEET-TS----CEEEEEECCSSCEEEEEECTTS----SCEEEEETTSEEEEECTTS-
T ss_pred ----------CEEEEEeCCCEEEEEcC-CC----CEEEEEeCCCCCEEEEEEcCCC----CEEEEEECcCEEEEEeCCC-
Confidence 78999999999999995 33 3566788999999999999984 6899999999999999532
Q ss_pred CCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 246 GDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 246 ~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
. ....+.+|.++|++++|+|||++|++++.|++|+|||
T Consensus 540 -~--~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 540 -Q--LLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp -C--EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred -C--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 1 2345577889999999999999999999999999997
No 36
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.4e-37 Score=293.32 Aligned_cols=250 Identities=24% Similarity=0.362 Sum_probs=203.4
Q ss_pred cccccccceEEEEEcCCC-CEEEEeeCCCcEEEEEeCCCC---ceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcE
Q 036510 6 IETGHEDTVHDVAMDYYG-KRLATASSDYSIKIIGVGNNT---SQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTV 81 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g-~~l~s~~~d~~i~lwd~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v 81 (288)
.+.+|++.|++++|++++ ++|+|||.|++|++|++.... ......+.+|...|.+++|+++ +++|+||+.|++|
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~--g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSD--GQFALSGSWDGEL 454 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCC--CCEEEEEeCCCcE
Confidence 456999999999999865 799999999999999986422 2446778999999999999864 8999999999999
Q ss_pred EEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCC
Q 036510 82 IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPST 161 (288)
Q Consensus 82 ~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~ 161 (288)
+|||+.++. ....+.+|...|.+++|+|+ +.++++|+.|++|++||..............+|...|.++.|+|++
T Consensus 455 ~vwd~~~~~---~~~~~~~h~~~v~~~~~s~~--~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 455 RLWDLAAGV---STRRFVGHTKDVLSVAFSLD--NRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp EEEETTTTE---EEEEEECCSSCEEEEEECTT--SSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS
T ss_pred EEEECCCCc---ceeEEeCCCCCEEEEEEeCC--CCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC
Confidence 999997654 44567899999999999998 5679999999999999975432111111234688899999999986
Q ss_pred CCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEE
Q 036510 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT 241 (288)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~ 241 (288)
. ...+++++.|++|++||++++ ++...+.+|...|.+++|+|++ ++|++|+.|++|++||
T Consensus 530 ~------------~~~l~s~s~d~~v~vwd~~~~----~~~~~~~~h~~~v~~v~~spdg----~~l~sg~~Dg~i~iwd 589 (694)
T 3dm0_A 530 L------------QPTIVSASWDKTVKVWNLSNC----KLRSTLAGHTGYVSTVAVSPDG----SLCASGGKDGVVLLWD 589 (694)
T ss_dssp S------------SCEEEEEETTSCEEEEETTTC----CEEEEECCCSSCEEEEEECTTS----SEEEEEETTSBCEEEE
T ss_pred C------------cceEEEEeCCCeEEEEECCCC----cEEEEEcCCCCCEEEEEEeCCC----CEEEEEeCCCeEEEEE
Confidence 2 146999999999999999875 3556778999999999999984 7899999999999999
Q ss_pred eecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 242 VAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
+..... .........|.+++|+|++.+|++++ |+.|+|||+
T Consensus 590 ~~~~~~----~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~ 630 (694)
T 3dm0_A 590 LAEGKK----LYSLEANSVIHALCFSPNRYWLCAAT-EHGIKIWDL 630 (694)
T ss_dssp TTTTEE----EECCBCSSCEEEEEECSSSSEEEEEE-TTEEEEEET
T ss_pred CCCCce----EEEecCCCcEEEEEEcCCCcEEEEEc-CCCEEEEEC
Confidence 875311 11122346799999999999888765 677999995
No 37
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.8e-38 Score=281.06 Aligned_cols=212 Identities=16% Similarity=0.163 Sum_probs=169.2
Q ss_pred ccccccceEEEEEcC-CCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 7 ETGHEDTVHDVAMDY-YGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 7 ~~~h~~~v~~~~~s~-~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
..+|+..|++|+|+| ++++||+|+.||+|+|||+.......+..+.+|.+.|++|+|+|. ++.+|+|||.|++|++||
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~-~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPL-NTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSS-CTTEEEEECSSSCEEEEE
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCC-CCCEEEEEeCCCEEEEee
Confidence 347889999999999 568999999999999999875554556677899999999999853 578999999999999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCc
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGA 165 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~ 165 (288)
++... .........+...+.+++|+|+ +.++++|+.||.|++||++... .....+|...|.++.|+|++.
T Consensus 194 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~l~~g~~dg~i~~wd~~~~~----~~~~~~h~~~v~~v~~~p~~~--- 263 (435)
T 4e54_B 194 FKGNI-LRVFASSDTINIWFCSLDVSAS--SRMVVTGDNVGNVILLNMDGKE----LWNLRMHKKKVTHVALNPCCD--- 263 (435)
T ss_dssp TTSCE-EEEEECCSSCSCCCCCEEEETT--TTEEEEECSSSBEEEEESSSCB----CCCSBCCSSCEEEEEECTTCS---
T ss_pred ccCCc-eeEEeccCCCCccEEEEEECCC--CCEEEEEeCCCcEeeeccCcce----eEEEecccceEEeeeecCCCc---
Confidence 86532 1111111223446789999998 6789999999999999986431 234568999999999999873
Q ss_pred eecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeec
Q 036510 166 LVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAR 244 (288)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~ 244 (288)
.+|++++.|++|+|||++..... .......+|...|.+++|+|++ .+|++++.|++|++||+..
T Consensus 264 ----------~~~~s~s~d~~v~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~spdg----~~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 264 ----------WFLATASVDQTVKIWDLRQVRGK-ASFLYSLPHRHPVNAACFSPDG----ARLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp ----------SEEEEEETTSBCCEEETTTCCSS-SCCSBCCBCSSCEEECCBCTTS----SEEEEEESSSCEEEEESSS
T ss_pred ----------eEEEEecCcceeeEEeccccccc-ceEEEeeeccccccceeECCCC----CeeEEEcCCCEEEEEECCC
Confidence 57889999999999999765321 1223346899999999999984 7899999999999999864
No 38
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.2e-36 Score=264.82 Aligned_cols=255 Identities=19% Similarity=0.310 Sum_probs=210.4
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
++..|+++|.+++|+|+|++|++++.|+.|++|++.....+.+..+.+|...|.+++|+++ +++|++++.|+.|++||
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~dg~i~vwd 80 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPD--SNRIVTCGTDRNAYVWT 80 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETT--TTEEEEEETTSCEEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCC--CCEEEEEcCCCeEEEEE
Confidence 4557999999999999999999999999999999965433378889999999999999864 89999999999999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeE-EeeccCCCCeeEEEeCCCCCCC
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTS-RIDQAHPVGVTSVSWAPSTAPG 164 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~v~~i~~~p~~~~~ 164 (288)
+.++. ......+..|...|.+++|+|+ +.++++|+.|+.|++||++....+... .....|...|.++.|+|++
T Consensus 81 ~~~~~-~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--- 154 (372)
T 1k8k_C 81 LKGRT-WKPTLVILRINRAARCVRWAPN--EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS--- 154 (372)
T ss_dssp EETTE-EEEEEECCCCSSCEEEEEECTT--SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTS---
T ss_pred CCCCe-eeeeEEeecCCCceeEEEECCC--CCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCC---
Confidence 97653 2233344678999999999998 678999999999999999876543332 3346788999999999986
Q ss_pred ceecccccCCCceeEEeecCCcEEEEEEeCCc--------------eeeeeeeccccCCcceEEEEecCCCCCCCcEEEE
Q 036510 165 ALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGI--------------WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230 (288)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--------------~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s 230 (288)
++|++++.|+.|++||++... ...+++..+.+|...|.+++|+|++ .+|++
T Consensus 155 -----------~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~ 219 (372)
T 1k8k_C 155 -----------VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG----SRVAW 219 (372)
T ss_dssp -----------SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS----SEEEE
T ss_pred -----------CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCC----CEEEE
Confidence 789999999999999964210 0113455677899999999999974 68999
Q ss_pred EeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 231 ASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 231 ~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
++.|+.|++||++... ....+..+..+|.+++|+|+|++|++| .|+.|++|+.
T Consensus 220 ~~~d~~i~i~d~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~ 272 (372)
T 1k8k_C 220 VSHDSTVCLADADKKM---AVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTY 272 (372)
T ss_dssp EETTTEEEEEEGGGTT---EEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEE
T ss_pred EeCCCEEEEEECCCCc---eeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEc
Confidence 9999999999997542 223445667799999999999999888 9999999985
No 39
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.8e-37 Score=291.39 Aligned_cols=249 Identities=20% Similarity=0.307 Sum_probs=198.0
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
.+.+|...|.+++|+|+|++|+||+.|++|+|||+.. +..+..+.+|...|.+++|+++ +.+|+|+|.|++|++||
T Consensus 425 ~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~--~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~s~D~~i~iwd 500 (694)
T 3dm0_A 425 RLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAA--GVSTRRFVGHTKDVLSVAFSLD--NRQIVSASRDRTIKLWN 500 (694)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEECTT--SSCEEEEETTSCEEEEC
T ss_pred eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCC--CcceeEEeCCCCCEEEEEEeCC--CCEEEEEeCCCEEEEEE
Confidence 4568999999999999999999999999999999854 4678889999999999999864 88999999999999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCc
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGA 165 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~ 165 (288)
..............+|...|.+++|+|+....++++|+.|++|++||++... ......+|...|.++.|+|++
T Consensus 501 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~---~~~~~~~h~~~v~~v~~spdg---- 573 (694)
T 3dm0_A 501 TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK---LRSTLAGHTGYVSTVAVSPDG---- 573 (694)
T ss_dssp TTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTS----
T ss_pred CCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc---EEEEEcCCCCCEEEEEEeCCC----
Confidence 7543211111112468899999999998655679999999999999998643 234567899999999999987
Q ss_pred eecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecC
Q 036510 166 LVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245 (288)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~ 245 (288)
++|++|+.|++|++||++++. ++..+. +...|.+++|+|+. . +++++.|+.|++||++..
T Consensus 574 ----------~~l~sg~~Dg~i~iwd~~~~~----~~~~~~-~~~~v~~~~~sp~~----~-~l~~~~~~~i~iwd~~~~ 633 (694)
T 3dm0_A 574 ----------SLCASGGKDGVVLLWDLAEGK----KLYSLE-ANSVIHALCFSPNR----Y-WLCAATEHGIKIWDLESK 633 (694)
T ss_dssp ----------SEEEEEETTSBCEEEETTTTE----EEECCB-CSSCEEEEEECSSS----S-EEEEEETTEEEEEETTTT
T ss_pred ----------CEEEEEeCCCeEEEEECCCCc----eEEEec-CCCcEEEEEEcCCC----c-EEEEEcCCCEEEEECCCC
Confidence 789999999999999998863 344444 34579999999973 3 555566778999998753
Q ss_pred CCcccceEee-------------------ccccCeEEEEeecCCCEEEEEeCCCcEEEeEcC
Q 036510 246 GDQWEGKVLH-------------------DFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288 (288)
Q Consensus 246 ~~~~~~~~~~-------------------~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~~ 288 (288)
... ..+. .+.-.+++++|||||++|++|+.||+|+||++.
T Consensus 634 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 634 SIV---EDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEE---EEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCh---hhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 210 1110 001137899999999999999999999999963
No 40
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=5.3e-36 Score=262.14 Aligned_cols=200 Identities=10% Similarity=0.094 Sum_probs=156.9
Q ss_pred eEEEEecCCCCCCEEE--EeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecC
Q 036510 58 VWEVAWAHPKFGSILA--SCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARA 135 (288)
Q Consensus 58 v~~~~~~~~~~~~~l~--s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~ 135 (288)
+..++|+|+ |++++ +++.|++|+|||+.+.. ....+ .|...|.+++|+|+ +.++++++. +.+.+|+..+
T Consensus 136 ~~~v~fSpD--g~~la~as~~~d~~i~iwd~~~~~---~~~~~-~~~~~V~~v~fspd--g~~l~s~s~-~~~~~~~~~~ 206 (365)
T 4h5i_A 136 TKLVYISRE--GTVAAIASSKVPAIMRIIDPSDLT---EKFEI-ETRGEVKDLHFSTD--GKVVAYITG-SSLEVISTVT 206 (365)
T ss_dssp EEEEEECTT--SSCEEEEESCSSCEEEEEETTTTE---EEEEE-ECSSCCCEEEECTT--SSEEEEECS-SCEEEEETTT
T ss_pred EEEEEEcCC--CCEEEEEECCCCCEEEEeECCCCc---EEEEe-CCCCceEEEEEccC--CceEEeccc-eeEEEEEecc
Confidence 567899875 77765 55689999999998754 33344 37789999999998 677888875 4566777665
Q ss_pred CCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCC----cEEEEEEeCCceeeeeeeccccCCcc
Q 036510 136 DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDN----TVKVWKLYNGIWKMDCFPALQMHTDW 211 (288)
Q Consensus 136 ~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~----~i~iwd~~~~~~~~~~~~~~~~h~~~ 211 (288)
+.. ........|...|.++.|+|++ .++++++.|+ .+++||+............+.+|...
T Consensus 207 ~~~-~~~~~~~~~~~~v~~v~fspdg--------------~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 271 (365)
T 4h5i_A 207 GSC-IARKTDFDKNWSLSKINFIADD--------------TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKG 271 (365)
T ss_dssp CCE-EEEECCCCTTEEEEEEEEEETT--------------EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSC
T ss_pred Ccc-eeeeecCCCCCCEEEEEEcCCC--------------CEEEEEecCCcceeEEeecccccceecceeeeeecCCCCC
Confidence 432 2223445788889999999987 7888888887 68889988765444445567889999
Q ss_pred eEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 212 VRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 212 V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
|++++|+|++ ++||+|+.|++|+|||++..+ .......+|..+|++++|||||++||+||.|++|||||+
T Consensus 272 V~~~~~Spdg----~~lasgs~D~~V~iwd~~~~~--~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 272 ITSMDVDMKG----ELAVLASNDNSIALVKLKDLS--MSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp EEEEEECTTS----CEEEEEETTSCEEEEETTTTE--EEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred eEeEEECCCC----CceEEEcCCCEEEEEECCCCc--EEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 9999999984 789999999999999987531 112234568899999999999999999999999999996
No 41
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.5e-36 Score=275.75 Aligned_cols=240 Identities=32% Similarity=0.515 Sum_probs=205.4
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
.+.+|...|.+++|+|++++|++++.|++|++|+.+. ..+..+.+|...|++++|+++ +++|++++.|+++++|+
T Consensus 298 ~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~---~~~~~~~~~~~~v~~~~~s~~--g~~l~~~~~dg~v~~~~ 372 (577)
T 2ymu_A 298 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG---QHLQTLTGHSSSVWGVAFSPD--GQTIASASDDKTVKLWN 372 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS---CEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEE
T ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC---CeeEEEeCCCCCEEEEEECCC--CCEEEEEeCCCEEEEEc
Confidence 4568999999999999999999999999999999753 456778899999999999865 89999999999999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCc
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGA 165 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~ 165 (288)
.. +. ....+..|...|.+++|+|+ +.++++++.|+.|++||.. + .......+|...|.++.|+|++
T Consensus 373 ~~-~~---~~~~~~~~~~~v~~~~~s~d--g~~l~~~~~d~~v~~~~~~-~---~~~~~~~~~~~~v~~~~~s~d~---- 438 (577)
T 2ymu_A 373 RN-GQ---LLQTLTGHSSSVRGVAFSPD--GQTIASASDDKTVKLWNRN-G---QLLQTLTGHSSSVWGVAFSPDD---- 438 (577)
T ss_dssp TT-CC---EEEEEECCSSCEEEEEECTT--SSCEEEEETTSEEEEECTT-C---CEEEEEECCSSCEEEEEECTTS----
T ss_pred CC-CC---EEEEecCCCCCeEEEEECCC--CCEEEEEeCCCEEEEEeCC-C---CEEEEecCCCCCeEEEEECCCC----
Confidence 63 33 44567789999999999998 6779999999999999953 2 2334557899999999999987
Q ss_pred eecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecC
Q 036510 166 LVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245 (288)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~ 245 (288)
++|++++.|++|++||+.. +++..+.+|...|.+++|+|++ ++||+++.|++|++|+.+.
T Consensus 439 ----------~~l~~~~~d~~v~~w~~~~-----~~~~~~~~~~~~v~~~~~spd~----~~las~~~d~~i~iw~~~~- 498 (577)
T 2ymu_A 439 ----------QTIASASDDKTVKLWNRNG-----QLLQTLTGHSSSVRGVAFSPDG----QTIASASDDKTVKLWNRNG- 498 (577)
T ss_dssp ----------SEEEEEETTSEEEEEETTS-----CEEEEEECCSSCEEEEEECTTS----CEEEEEETTSEEEEEETTS-
T ss_pred ----------CEEEEEcCCCEEEEEECCC-----CEEEEEcCCCCCEEEEEEcCCC----CEEEEEeCCCEEEEEcCCC-
Confidence 7899999999999999643 3456678899999999999984 7899999999999999542
Q ss_pred CCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 246 GDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 246 ~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
. ....+..|...|++++|+|||++|++++.|++|+|||.
T Consensus 499 -~--~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 499 -Q--LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp -C--EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred -C--EEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 1 23455678889999999999999999999999999984
No 42
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-35 Score=256.48 Aligned_cols=251 Identities=19% Similarity=0.290 Sum_probs=204.2
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
.+.+|++.|.+++|+|+|++|++|+.|+.|++||+.. .+.+..+.+|...|.+++|+++ +++|++++.|++|++||
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLN--GERLGTLDGHTGTIWSIDVDCF--TKYCVTGSADYSIKLWD 102 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTT--CCEEEEECCCSSCEEEEEECTT--SSEEEEEETTTEEEEEE
T ss_pred EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCC--chhhhhhhhcCCcEEEEEEcCC--CCEEEEEeCCCeEEEEE
Confidence 4569999999999999999999999999999999854 4678889999999999999864 88999999999999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC-----CcEEEEeecCCCCeee--------EEeeccCCC--
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD-----GNISVFTARADGGWDT--------SRIDQAHPV-- 150 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d-----~~i~i~d~~~~~~~~~--------~~~~~~~~~-- 150 (288)
+.++. ....+. |...|.+++|+|+ +.++++++.+ +.|++||++....... ......|..
T Consensus 103 ~~~~~---~~~~~~-~~~~v~~~~~~~~--~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (369)
T 3zwl_B 103 VSNGQ---CVATWK-SPVPVKRVEFSPC--GNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLD 176 (369)
T ss_dssp TTTCC---EEEEEE-CSSCEEEEEECTT--SSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCC
T ss_pred CCCCc---EEEEee-cCCCeEEEEEccC--CCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcc
Confidence 98765 333444 7889999999998 6678888888 9999999976532111 112234444
Q ss_pred CeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEE
Q 036510 151 GVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230 (288)
Q Consensus 151 ~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s 230 (288)
.+.++.|+|++ ++|++++.|+.|++||+.++. +.+..+..|...|.+++|+|+. .+|++
T Consensus 177 ~~~~~~~~~~~--------------~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~----~~l~~ 235 (369)
T 3zwl_B 177 AATVAGWSTKG--------------KYIIAGHKDGKISKYDVSNNY---EYVDSIDLHEKSISDMQFSPDL----TYFIT 235 (369)
T ss_dssp CEEEEEECGGG--------------CEEEEEETTSEEEEEETTTTT---EEEEEEECCSSCEEEEEECTTS----SEEEE
T ss_pred ceeEEEEcCCC--------------CEEEEEcCCCEEEEEECCCCc---EeEEEEecCCCceeEEEECCCC----CEEEE
Confidence 79999999986 789999999999999998732 3455677899999999999974 78999
Q ss_pred EeCCCcEEEEEeecCCCcc----------------------------------------------------cceEeeccc
Q 036510 231 ASEDGKVIIWTVAREGDQW----------------------------------------------------EGKVLHDFK 258 (288)
Q Consensus 231 ~s~D~~i~iw~~~~~~~~~----------------------------------------------------~~~~~~~~~ 258 (288)
++.|+.|++||++...... ....+..|.
T Consensus 236 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 315 (369)
T 3zwl_B 236 SSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHF 315 (369)
T ss_dssp EETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCS
T ss_pred ecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheeccc
Confidence 9999999999986532100 001123456
Q ss_pred cCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 259 TPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 259 ~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
..|.+++|+|+|++|++++.|++|+||++
T Consensus 316 ~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 316 GPLNTVAISPQGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 78999999999999999999999999995
No 43
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.9e-36 Score=270.44 Aligned_cols=259 Identities=20% Similarity=0.358 Sum_probs=209.1
Q ss_pred ccccccceEEEEEcCC-CCEEEEeeCCCcEEEEEeCC--------CCceeeEEEeccccCeEEEEecCCCCCC-EEEEee
Q 036510 7 ETGHEDTVHDVAMDYY-GKRLATASSDYSIKIIGVGN--------NTSQHLAKLSGHKGAVWEVAWAHPKFGS-ILASCS 76 (288)
Q Consensus 7 ~~~h~~~v~~~~~s~~-g~~l~s~~~d~~i~lwd~~~--------~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~s 76 (288)
..+|.+.|++++|+|+ +++|++++.|++|++|++.. .....+..+.+|...|++++|++. +. +|++++
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~ 201 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPN--LNGYLLSAS 201 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTT--STTEEEEEC
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCC--CCCeEEEEe
Confidence 4589999999999997 68999999999999999863 124567888999999999999865 45 999999
Q ss_pred CCCcEEEeecCCCCc----eEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCe
Q 036510 77 FDGTVIIWKEGNSNE----WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGV 152 (288)
Q Consensus 77 ~d~~v~iwd~~~~~~----~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v 152 (288)
.||+|++|++..... ......+..|...|.+++|+|++ +.++++++.|+.|++||++.............|...|
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLH-ESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSC-TTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCC-CCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 999999999976321 11134566899999999999954 5678999999999999998763222233445788999
Q ss_pred eEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEe
Q 036510 153 TSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASAS 232 (288)
Q Consensus 153 ~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s 232 (288)
.++.|+|++. .++++|+.|++|++||++... ..+..+.+|...|.+++|+|+. ..+|++++
T Consensus 281 ~~i~~~p~~~-------------~~l~tg~~dg~v~vwd~~~~~---~~~~~~~~h~~~v~~i~~sp~~---~~~l~s~~ 341 (430)
T 2xyi_A 281 NCLSFNPYSE-------------FILATGSADKTVALWDLRNLK---LKLHSFESHKDEIFQVQWSPHN---ETILASSG 341 (430)
T ss_dssp EEEEECSSCT-------------TEEEEEETTSEEEEEETTCTT---SCSEEEECCSSCEEEEEECSSC---TTEEEEEE
T ss_pred EEEEeCCCCC-------------CEEEEEeCCCeEEEEeCCCCC---CCeEEeecCCCCEEEEEECCCC---CCEEEEEe
Confidence 9999999873 478999999999999998632 3455677899999999999985 35799999
Q ss_pred CCCcEEEEEeecCCCc-----------ccceEeeccccCeEEEEeecCCC-EEEEEeCCCcEEEeEc
Q 036510 233 EDGKVIIWTVAREGDQ-----------WEGKVLHDFKTPVYRVSWSLTGN-ILAVADGNNNVTLWEE 287 (288)
Q Consensus 233 ~D~~i~iw~~~~~~~~-----------~~~~~~~~~~~~i~~~~~spdg~-~l~s~~~d~~v~~w~~ 287 (288)
.|+.|++||+...... .......+|...|.+++|+|+++ +|++++.|++|+||++
T Consensus 342 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 342 TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp TTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence 9999999999863211 11122345667899999999999 9999999999999995
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.7e-35 Score=252.40 Aligned_cols=241 Identities=17% Similarity=0.257 Sum_probs=204.1
Q ss_pred ccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCC
Q 036510 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGN 88 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~ 88 (288)
+|...|.+++|+|++++|++++.|++|++||+..........+.+|...|.+++|+++ +++|++++.|+.|++||+.+
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~v~~~d~~~ 172 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHN 172 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTT--SSEEEEEETTSCEEEEETTT
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCC--CCEEEEEeCCCcEEEEeCCC
Confidence 7899999999999999999999999999999976544467788899999999999864 88999999999999999976
Q ss_pred CCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceec
Q 036510 89 SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG 168 (288)
Q Consensus 89 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~ 168 (288)
+. ....+..|...|.+++|+|+ +.++++++.|+.|++||++.+.... ...+...+.++.|+|++
T Consensus 173 ~~---~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~----~~~~~~~v~~~~~s~~~------- 236 (337)
T 1gxr_A 173 QT---LVRQFQGHTDGASCIDISND--GTKLWTGGLDNTVRSWDLREGRQLQ----QHDFTSQIFSLGYCPTG------- 236 (337)
T ss_dssp TE---EEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEEEE----EEECSSCEEEEEECTTS-------
T ss_pred Cc---eeeeeecccCceEEEEECCC--CCEEEEEecCCcEEEEECCCCceEe----eecCCCceEEEEECCCC-------
Confidence 54 44567789999999999997 5678999999999999998653221 12467789999999987
Q ss_pred ccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCc
Q 036510 169 SGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQ 248 (288)
Q Consensus 169 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~ 248 (288)
.++++++.|+.|++||+.++. ...+..|...|.++.|+|++ .+|++++.|+.|++|++.....
T Consensus 237 -------~~l~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~~~~~~~~~~- 299 (337)
T 1gxr_A 237 -------EWLAVGMESSNVEVLHVNKPD-----KYQLHLHESCVLSLKFAYCG----KWFVSTGKDNLLNAWRTPYGAS- 299 (337)
T ss_dssp -------SEEEEEETTSCEEEEETTSSC-----EEEECCCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTCCE-
T ss_pred -------CEEEEEcCCCcEEEEECCCCC-----eEEEcCCccceeEEEECCCC----CEEEEecCCCcEEEEECCCCeE-
Confidence 789999999999999997752 23457799999999999984 6899999999999999875421
Q ss_pred ccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 249 WEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 249 ~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
.....+..+|.+++|+|+|++|++++.|+.|++|++
T Consensus 300 ---~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 300 ---IFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp ---EEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred ---EEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 122346788999999999999999999999999995
No 45
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-37 Score=281.99 Aligned_cols=249 Identities=13% Similarity=0.095 Sum_probs=193.5
Q ss_pred ccccccceEEEEEcCC------CCEEEEeeCCCcEEEEEeCCCCc---------eeeEEEeccccCeEEEEecCCCCCCE
Q 036510 7 ETGHEDTVHDVAMDYY------GKRLATASSDYSIKIIGVGNNTS---------QHLAKLSGHKGAVWEVAWAHPKFGSI 71 (288)
Q Consensus 7 ~~~h~~~v~~~~~s~~------g~~l~s~~~d~~i~lwd~~~~~~---------~~~~~~~~h~~~v~~~~~~~~~~~~~ 71 (288)
+.+|.+.|.+++|+|+ +.+|||++.|++|+|||+..+.. .....+.+|...|++++|+++ ..
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~---~~ 279 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP---TT 279 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS---SE
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC---Ce
Confidence 3467899999999996 57999999999999999864321 123578899999999999753 58
Q ss_pred EEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEE--EeccCCCC-eEEEEEeCCCcEEEEeecCCCCeeeEEeeccC
Q 036510 72 LASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSI--DWAPHELG-LCLACGSSDGNISVFTARADGGWDTSRIDQAH 148 (288)
Q Consensus 72 l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l--~~~p~~~~-~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~ 148 (288)
|++|+.||+|++||+.++.. ....+.+|...|+++ .|+|+ + .++++|+.|++|++||++...... ...+|
T Consensus 280 lasgs~DgtV~lWD~~~~~~--~~~~~~~H~~~V~sv~~~~s~~--g~~~laS~S~D~tvklWD~~~~~~~~---~~~~~ 352 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEV--PSFYDQVHDSYILSVSTAYSDF--EDTVVSTVAVDGYFYIFNPKDIATTK---TTVSR 352 (524)
T ss_dssp EEEEETTSEEEEEETTBCSS--CSEEEECSSSCEEEEEEECCTT--SCCEEEEEETTSEEEEECGGGHHHHC---EEEEE
T ss_pred EEEEeCCCEEEEEECCCCCC--ceEEeecccccEEEEEEEcCCC--CCeEEEEeccCCeEEEEECCCCCccc---ccccc
Confidence 99999999999999976532 234577899999999 46665 4 689999999999999998643221 22234
Q ss_pred C--CCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCc
Q 036510 149 P--VGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKS 226 (288)
Q Consensus 149 ~--~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~ 226 (288)
. ..|.+++|+|++ ..+++++.|++|++||++.+ .++..+.+|.+.|++|+|+|++ .
T Consensus 353 ~~~~~v~~v~fsp~~--------------~~l~s~~~d~tv~lwd~~~~----~~~~~l~gH~~~V~sva~Sp~g----~ 410 (524)
T 2j04_B 353 FRGSNLVPVVYCPQI--------------YSYIYSDGASSLRAVPSRAA----FAVHPLVSRETTITAIGVSRLH----P 410 (524)
T ss_dssp CSCCSCCCEEEETTT--------------TEEEEECSSSEEEEEETTCT----TCCEEEEECSSCEEEEECCSSC----C
T ss_pred cccCcccceEeCCCc--------------CeEEEeCCCCcEEEEECccc----ccceeeecCCCceEEEEeCCCC----C
Confidence 3 247899999987 67899999999999999876 3445678899999999999984 6
Q ss_pred EEEEEeCCCcEEEEEeecCCCc-----------------------------------------ccceEeeccccCeEEEE
Q 036510 227 TIASASEDGKVIIWTVAREGDQ-----------------------------------------WEGKVLHDFKTPVYRVS 265 (288)
Q Consensus 227 ~l~s~s~D~~i~iw~~~~~~~~-----------------------------------------~~~~~~~~~~~~i~~~~ 265 (288)
+|++|+.|++|++||+...... .....+.+|..+|.+|+
T Consensus 411 ~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Va 490 (524)
T 2j04_B 411 MVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTK 490 (524)
T ss_dssp BCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEE
T ss_pred eEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEE
Confidence 8999999999999986431000 00011234567899999
Q ss_pred eecCCC---EEEEEeCCCcEEEeEc
Q 036510 266 WSLTGN---ILAVADGNNNVTLWEE 287 (288)
Q Consensus 266 ~spdg~---~l~s~~~d~~v~~w~~ 287 (288)
|||+++ .+|+|+.||+||||++
T Consensus 491 fsp~~~~~~~lAsg~~~g~vrlw~l 515 (524)
T 2j04_B 491 WNETSAGGKCYAFSNSAGLLTLEYL 515 (524)
T ss_dssp ECCSTTTTTEEEEECTTSEEEEEEC
T ss_pred CCCCCCccHHHHhhccCceEEEEEc
Confidence 999965 9999999999999995
No 46
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.9e-35 Score=262.91 Aligned_cols=245 Identities=23% Similarity=0.460 Sum_probs=201.1
Q ss_pred cccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecC
Q 036510 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEG 87 (288)
Q Consensus 8 ~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~ 87 (288)
.+|.+.|++|+|+|+|++|++|+.|++|+|||+.. ++.+..+.+|...+.++.|+ +.+|++|+.|+.+++||..
T Consensus 144 ~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~--~~~~~~~~~h~~~v~~~s~~----~~~l~sgs~d~~i~~~d~~ 217 (420)
T 4gga_A 144 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ--QKRLRNMTSHSARVGSLSWN----SYILSSGSRSGHIHHHDVR 217 (420)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEEE----TTEEEEEETTSEEEEEETT
T ss_pred cCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCC--CcEEEEEeCCCCceEEEeeC----CCEEEEEeCCCceeEeeec
Confidence 47888999999999999999999999999999854 47789999999999999985 6799999999999999987
Q ss_pred CCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCC-eeeEEeeccCCCCeeEEEeCCCCCCCce
Q 036510 88 NSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGG-WDTSRIDQAHPVGVTSVSWAPSTAPGAL 166 (288)
Q Consensus 88 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~v~~i~~~p~~~~~~~ 166 (288)
.... ....+.+|...+.++.|+|+ +.++++++.|+.+++|+...+.. .........|...|.++.|+|...
T Consensus 218 ~~~~--~~~~~~~h~~~~~~~~~~~~--g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~---- 289 (420)
T 4gga_A 218 VAEH--HVATLSGHSQEVCGLRWAPD--GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQS---- 289 (420)
T ss_dssp SSSC--EEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCT----
T ss_pred ccce--eeEEecccccceeeeeecCC--CCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcc----
Confidence 6543 34567889999999999998 67899999999999999976532 122344567888999999999874
Q ss_pred ecccccCCCceeEE--eecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEe--CCCcEEEEEe
Q 036510 167 VGSGFLDPVQKLCS--GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASAS--EDGKVIIWTV 242 (288)
Q Consensus 167 ~~~~~~~~~~~l~s--~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s--~D~~i~iw~~ 242 (288)
.++++ |+.|++|++||+.++. +...+..| ..|.++.|+|+. ..+++++ .|+.|+|||+
T Consensus 290 ---------~~la~~~gs~D~~I~iwd~~t~~----~~~~~~~~-~~v~~~~~~~~~----~~lv~~sg~~d~~I~iwd~ 351 (420)
T 4gga_A 290 ---------NVLATGGGTSDRHIRIWNVCSGA----CLSAVDAH-SQVCSILWSPHY----KELISGHGFAQNQLVIWKY 351 (420)
T ss_dssp ---------TEEEEEECTTTCEEEEEETTTTE----EEEEEECS-SCEEEEEEETTT----TEEEEEECTTTCCEEEEET
T ss_pred ---------cEEEEEeecCCCEEEEEeCCccc----cceeeccc-cceeeeeecCCC----CeEEEEEecCCCEEEEEEC
Confidence 45554 5679999999998873 34444444 458899999984 4566554 7999999998
Q ss_pred ecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 243 AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
.... ....+.+|.+.|++++|+|||++|++|+.|++|+|||+
T Consensus 352 ~~~~---~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 352 PTMA---KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp TTCC---EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred CCCc---EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 7532 23456778899999999999999999999999999985
No 47
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-36 Score=264.19 Aligned_cols=259 Identities=16% Similarity=0.180 Sum_probs=194.4
Q ss_pred ccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCC-ceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEE
Q 036510 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNT-SQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83 (288)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~i 83 (288)
..+.+|...|.+++|+|+|++|++++.|++|++||+.... ......+.+|...|++++|+++ +.+|++++.|++|++
T Consensus 49 ~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i 126 (377)
T 3dwl_C 49 RTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN--EDKFAVGSGARVISV 126 (377)
T ss_dssp CCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTT--SSCCEEEESSSCEEE
T ss_pred EEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCC--CCEEEEEecCCeEEE
Confidence 4566899999999999999999999999999999986543 2356778899999999999864 889999999999999
Q ss_pred eecCCCCceEEeEEeec-CCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCC--------------C-eeeEEeecc
Q 036510 84 WKEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADG--------------G-WDTSRIDQA 147 (288)
Q Consensus 84 wd~~~~~~~~~~~~~~~-h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~--------------~-~~~~~~~~~ 147 (288)
||+.....+.....+.. |...|++++|+|+ +.++++|+.|+.|++||++... . ....... +
T Consensus 127 wd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 203 (377)
T 3dwl_C 127 CYFEQENDWWVSKHLKRPLRSTILSLDWHPN--NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-P 203 (377)
T ss_dssp CCC-----CCCCEEECSSCCSCEEEEEECTT--SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-C
T ss_pred EEECCcccceeeeEeecccCCCeEEEEEcCC--CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-c
Confidence 99977653333455666 9999999999997 6789999999999999986321 0 1112223 7
Q ss_pred CCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcE
Q 036510 148 HPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKST 227 (288)
Q Consensus 148 ~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~ 227 (288)
|...|.++.|+|++ ++|++++.|++|++||+.++......+..+.+|...|.+++|+|++ .+
T Consensus 204 ~~~~v~~~~~sp~~--------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~----~~ 265 (377)
T 3dwl_C 204 SGGWVHAVGFSPSG--------------NALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANES----AI 265 (377)
T ss_dssp CSSSEEEEEECTTS--------------SCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETT----EE
T ss_pred CCceEEEEEECCCC--------------CEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCC----CE
Confidence 88899999999987 7899999999999999998753333466788999999999999984 67
Q ss_pred EEEEeCCCcEEEEEeecCCCc----cc------------------c-----------e----------------Eeeccc
Q 036510 228 IASASEDGKVIIWTVAREGDQ----WE------------------G-----------K----------------VLHDFK 258 (288)
Q Consensus 228 l~s~s~D~~i~iw~~~~~~~~----~~------------------~-----------~----------------~~~~~~ 258 (288)
|++|+.|+.+ +|+....... .. . . ....|.
T Consensus 266 l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~ 344 (377)
T 3dwl_C 266 VAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQ 344 (377)
T ss_dssp EEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCS
T ss_pred EEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCcccc
Confidence 8888777666 6655421100 00 0 0 001267
Q ss_pred cCeEEEEeecCC-C---EEEEEeCCCcEEEeEc
Q 036510 259 TPVYRVSWSLTG-N---ILAVADGNNNVTLWEE 287 (288)
Q Consensus 259 ~~i~~~~~spdg-~---~l~s~~~d~~v~~w~~ 287 (288)
+.|+++++.++. . .|++|+.||+|+|||+
T Consensus 345 ~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 345 NMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp SCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 889999976654 4 6999999999999985
No 48
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-36 Score=267.82 Aligned_cols=253 Identities=15% Similarity=0.263 Sum_probs=206.4
Q ss_pred cccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCC--CceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNN--TSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 8 ~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
..|...|.+++|+|++++|++|+.|++|++|++... ..+.+..+.+|...|.+++|+++ .+.+|++++.|++|++||
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~dg~v~iwd 142 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAK-QDNVLASGGNNGEIFIWD 142 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSS-STTBEEEECSSSCEEBCB
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCC-CCCEEEEEcCCCeEEEEE
Confidence 478999999999999999999999999999998641 12467888999999999999864 378999999999999999
Q ss_pred cCCCC------ceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccC------CCCee
Q 036510 86 EGNSN------EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAH------PVGVT 153 (288)
Q Consensus 86 ~~~~~------~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~------~~~v~ 153 (288)
+.... .......+..|...|.+++|+|++ +.++++++.|+.|++||++.+... .....+ ...+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~---~~~~~~~~~~~~~~~v~ 218 (416)
T 2pm9_A 143 MNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSL-AHVFASAGSSNFASIWDLKAKKEV---IHLSYTSPNSGIKQQLS 218 (416)
T ss_dssp TTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSC-TTEEEEESSSSCEEEEETTTTEEE---EEECCCCCSSCCCCCEE
T ss_pred CCCCccccccccccccccccCCCCCeeEEEeCCCC-CcEEEEEcCCCCEEEEECCCCCcc---eEEeccccccccCCceE
Confidence 97654 222222345788999999999974 467899999999999999875322 222233 77899
Q ss_pred EEEeCCCCCCCceecccccCCCceeEEeecCC---cEEEEEEeCCceeeeeeeccc-cCCcceEEEEecCCCCCCCcEEE
Q 036510 154 SVSWAPSTAPGALVGSGFLDPVQKLCSGGCDN---TVKVWKLYNGIWKMDCFPALQ-MHTDWVRDVAWAPNLGLPKSTIA 229 (288)
Q Consensus 154 ~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~---~i~iwd~~~~~~~~~~~~~~~-~h~~~V~~v~~sp~~~~~~~~l~ 229 (288)
++.|+|++. .++++++.|+ .|++||++++. .....+. +|...|.+++|+|+. +.+|+
T Consensus 219 ~~~~~~~~~-------------~~l~~~~~d~~~~~i~~~d~~~~~---~~~~~~~~~~~~~v~~~~~s~~~---~~~l~ 279 (416)
T 2pm9_A 219 VVEWHPKNS-------------TRVATATGSDNDPSILIWDLRNAN---TPLQTLNQGHQKGILSLDWCHQD---EHLLL 279 (416)
T ss_dssp EEEECSSCT-------------TEEEEEECCSSSCCCCEEETTSTT---SCSBCCCSCCSSCEEEEEECSSC---SSCEE
T ss_pred EEEECCCCC-------------CEEEEEECCCCCceEEEEeCCCCC---CCcEEeecCccCceeEEEeCCCC---CCeEE
Confidence 999999863 5799999998 99999998752 2344566 899999999999932 46899
Q ss_pred EEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCC-CEEEEEeCCCcEEEeEc
Q 036510 230 SASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTG-NILAVADGNNNVTLWEE 287 (288)
Q Consensus 230 s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg-~~l~s~~~d~~v~~w~~ 287 (288)
+++.|++|++||++... ....+..|..+|.+++|+|++ ++|++++.|++|+||++
T Consensus 280 s~~~dg~v~~wd~~~~~---~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~ 335 (416)
T 2pm9_A 280 SSGRDNTVLLWNPESAE---QLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTL 335 (416)
T ss_dssp EEESSSEEEEECSSSCC---EEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEES
T ss_pred EEeCCCCEEEeeCCCCc---cceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEc
Confidence 99999999999987542 234456677899999999999 89999999999999995
No 49
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.8e-35 Score=257.31 Aligned_cols=255 Identities=18% Similarity=0.147 Sum_probs=203.2
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
.+.+|...|.+++|+|++++|++++.|++|++||+..........+.+|...|.+++|+++ +.+|++++.|+.|++||
T Consensus 47 ~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~i~d 124 (372)
T 1k8k_C 47 ELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPN--EKKFAVGSGSRVISICY 124 (372)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTT--SSEEEEEETTSSEEEEE
T ss_pred eecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCC--CCEEEEEeCCCEEEEEE
Confidence 4568999999999999999999999999999999965433334455789999999999864 89999999999999999
Q ss_pred cCCCCceEEeEE-eecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCC---------------CeeeEEeeccCC
Q 036510 86 EGNSNEWIKDHV-FEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADG---------------GWDTSRIDQAHP 149 (288)
Q Consensus 86 ~~~~~~~~~~~~-~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~---------------~~~~~~~~~~~~ 149 (288)
+.....+..... ...|...|.+++|+|+ +.++++|+.|+.|++||++... ..........|.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (372)
T 1k8k_C 125 FEQENDWWVCKHIKKPIRSTVLSLDWHPN--SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC 202 (372)
T ss_dssp EETTTTEEEEEEECTTCCSCEEEEEECTT--SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS
T ss_pred ecCCCcceeeeeeecccCCCeeEEEEcCC--CCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCC
Confidence 987654322233 3568899999999997 6689999999999999975210 012234455788
Q ss_pred CCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEE
Q 036510 150 VGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIA 229 (288)
Q Consensus 150 ~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~ 229 (288)
..+.++.|+|++ .+|++++.|+.|++||++++ +++..+..|...|.+++|+|++ .+|+
T Consensus 203 ~~v~~~~~~~~~--------------~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~~~~----~~l~ 260 (372)
T 1k8k_C 203 GWVHGVCFSANG--------------SRVAWVSHDSTVCLADADKK----MAVATLASETLPLLAVTFITES----SLVA 260 (372)
T ss_dssp SCEEEEEECSSS--------------SEEEEEETTTEEEEEEGGGT----TEEEEEECSSCCEEEEEEEETT----EEEE
T ss_pred CeEEEEEECCCC--------------CEEEEEeCCCEEEEEECCCC----ceeEEEccCCCCeEEEEEecCC----CEEE
Confidence 899999999987 78999999999999999876 3455677899899999999974 5666
Q ss_pred EEeCCCcEEEEEeecCCCc-------------------------------cc-------ceEeeccccCeEEEEee-cCC
Q 036510 230 SASEDGKVIIWTVAREGDQ-------------------------------WE-------GKVLHDFKTPVYRVSWS-LTG 270 (288)
Q Consensus 230 s~s~D~~i~iw~~~~~~~~-------------------------------~~-------~~~~~~~~~~i~~~~~s-pdg 270 (288)
+| .|+.|++|++...... .. .....+|..+|++++|+ ++|
T Consensus 261 ~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g 339 (372)
T 1k8k_C 261 AG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGK 339 (372)
T ss_dssp EE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTT
T ss_pred EE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCC
Confidence 66 9999999999861000 00 11223677899999966 677
Q ss_pred ---CEEEEEeCCCcEEEeEc
Q 036510 271 ---NILAVADGNNNVTLWEE 287 (288)
Q Consensus 271 ---~~l~s~~~d~~v~~w~~ 287 (288)
++|++|+.||+|+|||+
T Consensus 340 ~~~~~l~s~~~Dg~i~~W~~ 359 (372)
T 1k8k_C 340 AKCSQFCTTGMDGGMSIWDV 359 (372)
T ss_dssp TSCSEEEEEETTSEEEEEEH
T ss_pred cceeeEEEecCCCceEEEEe
Confidence 99999999999999995
No 50
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.2e-36 Score=262.12 Aligned_cols=253 Identities=19% Similarity=0.260 Sum_probs=203.0
Q ss_pred ccccceEEEEEcCC----CCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEe
Q 036510 9 GHEDTVHDVAMDYY----GKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW 84 (288)
Q Consensus 9 ~h~~~v~~~~~s~~----g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iw 84 (288)
.|...|.+++|+|+ |++|++|+.|++|++||+.. .+.+..+.+|...|.+++|++. ++.+|++++.|++|++|
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~--~~~~~~~~~~~~~i~~~~~~~~-~~~~l~s~~~dg~i~iw 143 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT--MQCIKHYVGHGNAINELKFHPR-DPNLLLSVSKDHALRLW 143 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT--CCEEEEEESCCSCEEEEEECSS-CTTEEEEEETTSCEEEE
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh--ceEeeeecCCCCcEEEEEECCC-CCCEEEEEeCCCeEEEE
Confidence 36788999999998 67999999999999999854 3668889999999999999862 48899999999999999
Q ss_pred ecCCCCceEEeEEe---ecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCee---------------------
Q 036510 85 KEGNSNEWIKDHVF---EDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWD--------------------- 140 (288)
Q Consensus 85 d~~~~~~~~~~~~~---~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~--------------------- 140 (288)
|+.++. ....+ ..|...|.+++|+|+ +.++++++.|+.|++||++......
T Consensus 144 d~~~~~---~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (366)
T 3k26_A 144 NIQTDT---LVAIFGGVEGHRDEVLSADYDLL--GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQK 218 (366)
T ss_dssp ETTTTE---EEEEECSTTSCSSCEEEEEECTT--SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEE
T ss_pred EeecCe---EEEEecccccccCceeEEEECCC--CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCccccccee
Confidence 998664 33344 579999999999997 6789999999999999987532110
Q ss_pred ----eEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCce----------eeeeeeccc
Q 036510 141 ----TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIW----------KMDCFPALQ 206 (288)
Q Consensus 141 ----~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~----------~~~~~~~~~ 206 (288)
.......|...|.++.|+ + +++++++.|+.|++||+.+... ....+..+.
T Consensus 219 ~~~~~~~~~~~~~~~v~~~~~~--~--------------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (366)
T 3k26_A 219 IHFPDFSTRDIHRNYVDCVRWL--G--------------DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD 282 (366)
T ss_dssp ECCCSEEECSSCSSCCCEEEEE--T--------------TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE
T ss_pred eccCccccccCCcceEEEEEEc--C--------------CEEEEEecCCEEEEEeCCCccccccccccCCcchheecccc
Confidence 011223488889999987 2 5799999999999999976532 113455677
Q ss_pred cCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcc-cceEeecc--ccCeEEEEeecCCCEEEEEeCCCcEE
Q 036510 207 MHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQW-EGKVLHDF--KTPVYRVSWSLTGNILAVADGNNNVT 283 (288)
Q Consensus 207 ~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~-~~~~~~~~--~~~i~~~~~spdg~~l~s~~~d~~v~ 283 (288)
+|...|.+++|+|+. .+.+|++|+.|+.|++||+....... ....+..+ ..+|.+++|+|+|++|++++.|+.|+
T Consensus 283 ~~~~~v~~~~~s~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~ 360 (366)
T 3k26_A 283 YSQCDIWYMRFSMDF--WQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIW 360 (366)
T ss_dssp CSSCCSSCCCCEECT--TSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ccCCcEEEEEEcCCC--CCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEE
Confidence 899999999999972 13789999999999999997643211 11234444 68999999999999999999999999
Q ss_pred EeEc
Q 036510 284 LWEE 287 (288)
Q Consensus 284 ~w~~ 287 (288)
|||+
T Consensus 361 iwd~ 364 (366)
T 3k26_A 361 RWDR 364 (366)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9996
No 51
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-37 Score=280.56 Aligned_cols=234 Identities=12% Similarity=0.147 Sum_probs=177.6
Q ss_pred EEEEeeCCCcEEEEEeCCCCce--eeEEEeccccCeEEEEecCC----CCCCEEEEeeCCCcEEEeecCCCCce------
Q 036510 25 RLATASSDYSIKIIGVGNNTSQ--HLAKLSGHKGAVWEVAWAHP----KFGSILASCSFDGTVIIWKEGNSNEW------ 92 (288)
Q Consensus 25 ~l~s~~~d~~i~lwd~~~~~~~--~~~~~~~h~~~v~~~~~~~~----~~~~~l~s~s~d~~v~iwd~~~~~~~------ 92 (288)
.|+|++.|++|+||+++..... ...++.+|.+.|+.++|+|+ +++.+|+++|.|++|+|||+..+...
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~ 254 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM 254 (524)
T ss_dssp -------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC
T ss_pred hhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee
Confidence 4455678899999998654321 13456778899999999874 23679999999999999998654311
Q ss_pred --EEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEE--EeCCCCCCCceec
Q 036510 93 --IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSV--SWAPSTAPGALVG 168 (288)
Q Consensus 93 --~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i--~~~p~~~~~~~~~ 168 (288)
.....+.+|...|++++|+|+ + .+++|+.||+|++||++.+.. +.....+|...|.++ .|+|++.
T Consensus 255 ~~~p~~~l~~h~~~v~sv~~s~~--~-~lasgs~DgtV~lWD~~~~~~--~~~~~~~H~~~V~sv~~~~s~~g~------ 323 (524)
T 2j04_B 255 CEKPSLTLSLADSLITTFDFLSP--T-TVVCGFKNGFVAEFDLTDPEV--PSFYDQVHDSYILSVSTAYSDFED------ 323 (524)
T ss_dssp CCSCSEEECCTTTCEEEEEESSS--S-EEEEEETTSEEEEEETTBCSS--CSEEEECSSSCEEEEEEECCTTSC------
T ss_pred ecCceEEEEcCCCCEEEEEecCC--C-eEEEEeCCCEEEEEECCCCCC--ceEEeecccccEEEEEEEcCCCCC------
Confidence 012356789999999999985 3 699999999999999986432 223456899999999 5666531
Q ss_pred ccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCc--ceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCC
Q 036510 169 SGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTD--WVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREG 246 (288)
Q Consensus 169 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~--~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~ 246 (288)
++|+|++.|++|+|||++++. +...+.+|.. .|.+|+|+|++ ..||+++.|++|++||++...
T Consensus 324 -------~~laS~S~D~tvklWD~~~~~----~~~~~~~~~~~~~v~~v~fsp~~----~~l~s~~~d~tv~lwd~~~~~ 388 (524)
T 2j04_B 324 -------TVVSTVAVDGYFYIFNPKDIA----TTKTTVSRFRGSNLVPVVYCPQI----YSYIYSDGASSLRAVPSRAAF 388 (524)
T ss_dssp -------CEEEEEETTSEEEEECGGGHH----HHCEEEEECSCCSCCCEEEETTT----TEEEEECSSSEEEEEETTCTT
T ss_pred -------eEEEEeccCCeEEEEECCCCC----cccccccccccCcccceEeCCCc----CeEEEeCCCCcEEEEECcccc
Confidence 579999999999999997652 3334455643 48899999974 579999999999999987532
Q ss_pred CcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 247 DQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
....+.+|.++|++++|||+|++|++|+.|++|+|||.
T Consensus 389 ---~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 389 ---AVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp ---CCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred ---cceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 12345678899999999999999999999999999984
No 52
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.4e-35 Score=254.87 Aligned_cols=255 Identities=15% Similarity=0.176 Sum_probs=199.4
Q ss_pred cccccceEEEEEcCC---CCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecC----CCCCCEEEEeeCCCc
Q 036510 8 TGHEDTVHDVAMDYY---GKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH----PKFGSILASCSFDGT 80 (288)
Q Consensus 8 ~~h~~~v~~~~~s~~---g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~~~l~s~s~d~~ 80 (288)
.+|...|.+++|+|+ |++|++|+.|++|++||+.... ..+..+.+|...|.++.|.+ .+++.+|++++.|++
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~ 140 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE-MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGT 140 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS-SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSC
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC-ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCe
Confidence 379999999999998 7999999999999999986432 26788899999999997642 235889999999999
Q ss_pred EEEeecCCCCceEEeEEeecCCC----ceeEEE----eccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCe
Q 036510 81 VIIWKEGNSNEWIKDHVFEDHKS----SVNSID----WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGV 152 (288)
Q Consensus 81 v~iwd~~~~~~~~~~~~~~~h~~----~v~~l~----~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v 152 (288)
|++||+...... ...+..|.. .+.++. |+|+ +.++++|+.|+.|++||++.... .....|...|
T Consensus 141 i~vwd~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~v 212 (357)
T 3i2n_A 141 VKVWDPRQKDDP--VANMEPVQGENKRDCWTVAFGNAYNQE--ERVVCAGYDNGDIKLFDLRNMAL----RWETNIKNGV 212 (357)
T ss_dssp EEEECTTSCSSC--SEEECCCTTSCCCCEEEEEEECCCC-C--CCEEEEEETTSEEEEEETTTTEE----EEEEECSSCE
T ss_pred EEEEeCCCCCCc--ceeccccCCCCCCceEEEEEEeccCCC--CCEEEEEccCCeEEEEECccCce----eeecCCCCce
Confidence 999999876421 233444433 799998 5666 67899999999999999986532 2335678899
Q ss_pred eEEEeCC---CCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeee-eeccccCCcceEEEEecCCCCCCCcEE
Q 036510 153 TSVSWAP---STAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDC-FPALQMHTDWVRDVAWAPNLGLPKSTI 228 (288)
Q Consensus 153 ~~i~~~p---~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~h~~~V~~v~~sp~~~~~~~~l 228 (288)
.++.|+| ++ ..|++++.|+.|++||++++...... ...+.+|...|.++.|+|++ ..+|
T Consensus 213 ~~~~~~~~~~~~--------------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l 275 (357)
T 3i2n_A 213 CSLEFDRKDISM--------------NKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQN---RELF 275 (357)
T ss_dssp EEEEESCSSSSC--------------CEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTE---EEEE
T ss_pred EEEEcCCCCCCC--------------CEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCC---CcEE
Confidence 9999999 55 78999999999999999864211010 11334899999999999974 2379
Q ss_pred EEEeCCCcEEEEEeecCCCc----------------ccceEeeccccCeEEEEeecCCCEEE-EEeCCCcEEEeEcC
Q 036510 229 ASASEDGKVIIWTVAREGDQ----------------WEGKVLHDFKTPVYRVSWSLTGNILA-VADGNNNVTLWEEA 288 (288)
Q Consensus 229 ~s~s~D~~i~iw~~~~~~~~----------------~~~~~~~~~~~~i~~~~~spdg~~l~-s~~~d~~v~~w~~~ 288 (288)
++++.|+.|++||++..... .....+..|..+|.+++|+|+|++|+ +++.|+.|+|||+.
T Consensus 276 ~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 276 LTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp EEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred EEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 99999999999999854321 11233456778999999999999998 79999999999963
No 53
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=9.6e-35 Score=255.34 Aligned_cols=259 Identities=18% Similarity=0.279 Sum_probs=203.3
Q ss_pred CccccccccceEEEEEcC-CCCEEEEeeCCCcEEEEEeCCCCceeeEEE-----------eccccCeEEEEecCCCCCCE
Q 036510 4 QKIETGHEDTVHDVAMDY-YGKRLATASSDYSIKIIGVGNNTSQHLAKL-----------SGHKGAVWEVAWAHPKFGSI 71 (288)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~-~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~-----------~~h~~~v~~~~~~~~~~~~~ 71 (288)
..++.+|.+.|.+++|+| ++++|++|+.|++|++||+........... .+|...|.+++|+++ ++.+
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~ 114 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPH-DTGM 114 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTT-CTTC
T ss_pred eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccC-CCcE
Confidence 446678999999999999 999999999999999999865432211111 259999999999863 4789
Q ss_pred EEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCC-CCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCC
Q 036510 72 LASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHE-LGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPV 150 (288)
Q Consensus 72 l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~-~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 150 (288)
|++++.|+.|++||+.++. ....+. +...+.++.|+|.. .+.++++|+.|+.|++||++.+... .....|..
T Consensus 115 l~s~~~d~~i~iwd~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~---~~~~~~~~ 187 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQ---TADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS---HILQGHRQ 187 (408)
T ss_dssp EEEEETTSEEEEEETTTTE---EEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC---EEECCCCS
T ss_pred EEEEeCCCeEEEeeCCCCc---cceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee---eeecCCCC
Confidence 9999999999999997654 233333 67789999999864 2447999999999999999876432 34567889
Q ss_pred CeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeee------------eeeccccCCcceEEEEec
Q 036510 151 GVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMD------------CFPALQMHTDWVRDVAWA 218 (288)
Q Consensus 151 ~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~------------~~~~~~~h~~~V~~v~~s 218 (288)
.|.++.|+|++. .+|++++.|+.|++||++.+..... ......+|...|.+++|+
T Consensus 188 ~v~~~~~~~~~~-------------~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 254 (408)
T 4a11_B 188 EILAVSWSPRYD-------------YILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT 254 (408)
T ss_dssp CEEEEEECSSCT-------------TEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC
T ss_pred cEEEEEECCCCC-------------cEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc
Confidence 999999999872 3689999999999999976531111 111225788999999999
Q ss_pred CCCCCCCcEEEEEeCCCcEEEEEeecCCCc--------------------------------------------ccceEe
Q 036510 219 PNLGLPKSTIASASEDGKVIIWTVAREGDQ--------------------------------------------WEGKVL 254 (288)
Q Consensus 219 p~~~~~~~~l~s~s~D~~i~iw~~~~~~~~--------------------------------------------~~~~~~ 254 (288)
|++ .+|++++.|+.|++||+...... .....+
T Consensus 255 ~~~----~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~ 330 (408)
T 4a11_B 255 SDG----LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML 330 (408)
T ss_dssp TTS----SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE
T ss_pred CCC----CEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee
Confidence 974 78999999999999998753210 011223
Q ss_pred eccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 255 HDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 255 ~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
..|..+|.+++|+|+|++|++|+.||.|++||.
T Consensus 331 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~ 363 (408)
T 4a11_B 331 KGHYKTVDCCVFQSNFQELYSGSRDCNILAWVP 363 (408)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred ccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeC
Confidence 456788999999999999999999999999995
No 54
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.4e-35 Score=258.44 Aligned_cols=243 Identities=23% Similarity=0.410 Sum_probs=201.1
Q ss_pred ccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCC
Q 036510 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGN 88 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~ 88 (288)
.|...|.+++|+|+|++|++|+.|+.|++||+.. .+.+..+.+|...|.+++|. +.+|++++.|+.|++||++.
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~~~~~~~v~~~~~~----~~~l~~~~~dg~i~i~d~~~ 205 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVES--QTKLRTMAGHQARVGCLSWN----RHVLSSGSRSGAIHHHDVRI 205 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT--CCEEEEECCCSSCEEEEEEE----TTEEEEEETTSEEEEEETTS
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcC--CeEEEEecCCCCceEEEEEC----CCEEEEEcCCCCEEEEeccc
Confidence 4889999999999999999999999999999854 36688889999999999994 57999999999999999975
Q ss_pred CCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceec
Q 036510 89 SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG 168 (288)
Q Consensus 89 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~ 168 (288)
... ....+..|...|.+++|+|+ +.++++|+.|+.|++||++... .......|...|.++.|+|++.
T Consensus 206 ~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~p~~~------ 272 (401)
T 4aez_A 206 ANH--QIGTLQGHSSEVCGLAWRSD--GLQLASGGNDNVVQIWDARSSI---PKFTKTNHNAAVKAVAWCPWQS------ 272 (401)
T ss_dssp SSC--EEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTCSS---EEEEECCCSSCCCEEEECTTST------
T ss_pred Ccc--eeeEEcCCCCCeeEEEEcCC--CCEEEEEeCCCeEEEccCCCCC---ccEEecCCcceEEEEEECCCCC------
Confidence 442 34567789999999999997 6789999999999999998643 2334567888999999999873
Q ss_pred ccccCCCceeEEee--cCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEE--EeCCCcEEEEEeec
Q 036510 169 SGFLDPVQKLCSGG--CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS--ASEDGKVIIWTVAR 244 (288)
Q Consensus 169 ~~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s--~s~D~~i~iw~~~~ 244 (288)
.++++++ .|+.|++||+.++. ++..+. |...|.+++|+|++ .+|++ |+.|+.|++|++..
T Consensus 273 -------~ll~~~~gs~d~~i~i~d~~~~~----~~~~~~-~~~~v~~~~~s~~~----~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 273 -------NLLATGGGTMDKQIHFWNAATGA----RVNTVD-AGSQVTSLIWSPHS----KEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp -------TEEEEECCTTTCEEEEEETTTCC----EEEEEE-CSSCEEEEEECSSS----SEEEEEECTTTCEEEEEEEET
T ss_pred -------CEEEEecCCCCCEEEEEECCCCC----EEEEEe-CCCcEEEEEECCCC----CeEEEEeecCCCcEEEEecCC
Confidence 5677765 79999999998763 333333 56679999999984 57877 44899999999975
Q ss_pred CCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 245 EGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 245 ~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
.. ......+..|...|.+++|+|||++|++++.|++|+||++
T Consensus 337 ~~-~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~ 378 (401)
T 4aez_A 337 SG-LTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRV 378 (401)
T ss_dssp TE-EEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEEC
T ss_pred cc-ceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 32 1112234567789999999999999999999999999995
No 55
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=9.6e-36 Score=261.10 Aligned_cols=251 Identities=12% Similarity=0.125 Sum_probs=194.4
Q ss_pred cccccccceEEEEEcCCC-CEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEe
Q 036510 6 IETGHEDTVHDVAMDYYG-KRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW 84 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g-~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iw 84 (288)
.+.+|++.|.+++|+|+| ++|++|+.|++|++||+..........+.+|...|.+++|+++ ++.+|++++.|++|++|
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~d~~i~iw 146 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQF-NTNQLFVSSIRGATTLR 146 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETT-EEEEEEEEETTTEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCC-CCCEEEEEeCCCEEEEE
Confidence 456899999999999999 9999999999999999975543333344579999999999863 37899999999999999
Q ss_pred ecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCC
Q 036510 85 KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPG 164 (288)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~ 164 (288)
|+.. ...........|...|.+++|+|+ +.++++|+.|+.|++||++ +. ......+|...|.++.|+|++.
T Consensus 147 d~~~-~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~~-~~---~~~~~~~h~~~v~~~~~~~~~~-- 217 (383)
T 3ei3_B 147 DFSG-SVIQVFAKTDSWDYWYCCVDVSVS--RQMLATGDSTGRLLLLGLD-GH---EIFKEKLHKAKVTHAEFNPRCD-- 217 (383)
T ss_dssp ETTS-CEEEEEECCCCSSCCEEEEEEETT--TTEEEEEETTSEEEEEETT-SC---EEEEEECSSSCEEEEEECSSCT--
T ss_pred ECCC-CceEEEeccCCCCCCeEEEEECCC--CCEEEEECCCCCEEEEECC-CC---EEEEeccCCCcEEEEEECCCCC--
Confidence 9974 322111112234578999999998 5689999999999999984 22 2345567999999999999872
Q ss_pred ceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecC-CCCCCCcEEEEEeCCCcEEEEEee
Q 036510 165 ALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAP-NLGLPKSTIASASEDGKVIIWTVA 243 (288)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~~~~l~s~s~D~~i~iw~~~ 243 (288)
.+|++++.|++|++||+++......++..+ +|...|.+++|+| + +.+|++++.|+.|++||++
T Consensus 218 -----------~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~----~~~l~~~~~d~~i~iwd~~ 281 (383)
T 3ei3_B 218 -----------WLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTD----STKLLTTDQRNEIRVYSSY 281 (383)
T ss_dssp -----------TEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTT----SCEEEEEESSSEEEEEETT
T ss_pred -----------CEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCC----CCEEEEEcCCCcEEEEECC
Confidence 389999999999999998732111333343 6999999999999 7 4789999999999999987
Q ss_pred cCCCcccceEeecc-----------------ccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 244 REGDQWEGKVLHDF-----------------KTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 244 ~~~~~~~~~~~~~~-----------------~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
..... ..+..+ ...+..++|+|||++ +|+.|++|+|||+
T Consensus 282 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~ 337 (383)
T 3ei3_B 282 DWSKP---DQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDA 337 (383)
T ss_dssp BTTSC---SEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEET
T ss_pred CCccc---cccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEec
Confidence 64321 111111 134566788888877 7889999999995
No 56
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=7.3e-36 Score=266.37 Aligned_cols=256 Identities=13% Similarity=0.208 Sum_probs=193.0
Q ss_pred ccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCC---------ceeeEEEeccc------------cCeEEEEecCCC
Q 036510 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNT---------SQHLAKLSGHK------------GAVWEVAWAHPK 67 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~---------~~~~~~~~~h~------------~~v~~~~~~~~~ 67 (288)
.|.+.|.+++|+|+|++||+|+.|+.|+||++.... .+....+.+|. ..|.+++|+++.
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 468999999999999999999999999999986432 12477889998 889999998753
Q ss_pred CCCEEEEeeCCCcEEEeecCCCCce------------------------------------EEeEE-eecCCCceeEEEe
Q 036510 68 FGSILASCSFDGTVIIWKEGNSNEW------------------------------------IKDHV-FEDHKSSVNSIDW 110 (288)
Q Consensus 68 ~~~~l~s~s~d~~v~iwd~~~~~~~------------------------------------~~~~~-~~~h~~~v~~l~~ 110 (288)
...+|++++.|++|++|++...... ..... ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 2279999999999999998642210 00112 3579999999999
Q ss_pred ccCCCCeEEEEEeCCCcEEEEeecCCCC-eeeE----EeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCC
Q 036510 111 APHELGLCLACGSSDGNISVFTARADGG-WDTS----RIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDN 185 (288)
Q Consensus 111 ~p~~~~~~l~sg~~d~~i~i~d~~~~~~-~~~~----~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~ 185 (288)
+|+ +.++++| .|+.|++||++.... .... ....+|...|.++.|+|++. ++|++|+.|+
T Consensus 186 ~~~--~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-------------~~l~s~~~dg 249 (447)
T 3dw8_B 186 NSD--YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSC-------------NTFVYSSSKG 249 (447)
T ss_dssp CTT--SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCT-------------TEEEEEETTS
T ss_pred cCC--CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCC-------------cEEEEEeCCC
Confidence 997 6678888 799999999974321 1110 02457899999999999863 6799999999
Q ss_pred cEEEEEEeCCceeeeeeeccccCCc------------ceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceE
Q 036510 186 TVKVWKLYNGIWKMDCFPALQMHTD------------WVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKV 253 (288)
Q Consensus 186 ~i~iwd~~~~~~~~~~~~~~~~h~~------------~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~ 253 (288)
.|++||++++.........+.+|.. .|.+++|+|++ .+|++++. +.|++||++..... ...
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g----~~l~~~~~-~~v~iwd~~~~~~~--~~~ 322 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG----RYMMTRDY-LSVKVWDLNMENRP--VET 322 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTS----SEEEEEES-SEEEEEETTCCSSC--SCC
T ss_pred eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCC----CEEEEeeC-CeEEEEeCCCCccc--cce
Confidence 9999999876321111345566665 89999999974 78999999 99999999752221 122
Q ss_pred eecccc---------------CeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 254 LHDFKT---------------PVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 254 ~~~~~~---------------~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
+..|.. .+..++|+|+|++|++|+.|+.|+|||+
T Consensus 323 ~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~ 371 (447)
T 3dw8_B 323 YQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDR 371 (447)
T ss_dssp EESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEET
T ss_pred eeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEc
Confidence 233321 1345999999999999999999999995
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.9e-35 Score=259.15 Aligned_cols=258 Identities=15% Similarity=0.147 Sum_probs=201.4
Q ss_pred cceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCc
Q 036510 12 DTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNE 91 (288)
Q Consensus 12 ~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~ 91 (288)
..+....|+++|++|++|+.|++|++||+.. .+....+.+|...|.+++|+++ +.+|++++.|++|++||+.++.
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~d~~i~iwd~~~~~- 172 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNF--NLQREIDQAHVSEITKLKFFPS--GEALISSSQDMQLKIWSVKDGS- 172 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTS--CEEEEETTSSSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTCC-
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCC--cceeeecccccCccEEEEECCC--CCEEEEEeCCCeEEEEeCCCCc-
Confidence 3444456899999999999999999999853 3566677899999999999864 8899999999999999998765
Q ss_pred eEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCC-------C
Q 036510 92 WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP-------G 164 (288)
Q Consensus 92 ~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~-------~ 164 (288)
....+.+|...|.+++|+|+ +.++++|+.|+.|++||++++...........|...+.++.|.|.... .
T Consensus 173 --~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 248 (420)
T 3vl1_A 173 --NPRTLIGHRATVTDIAIIDR--GRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTS 248 (420)
T ss_dssp --CCEEEECCSSCEEEEEEETT--TTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCC
T ss_pred --CceEEcCCCCcEEEEEEcCC--CCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccC
Confidence 34567789999999999998 668899999999999999876433333233356778888888765432 2
Q ss_pred ceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeec
Q 036510 165 ALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAR 244 (288)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~ 244 (288)
......+..++++|++|+.|+.|++||++++.. .......|...|.+++|+|+. ..+|++|+.|+.|++||++.
T Consensus 249 ~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~---~~~l~~g~~dg~i~vwd~~~ 322 (420)
T 3vl1_A 249 KKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQ---TIQLPSKFTCSCNSLTVDGNN---ANYIYAGYENGMLAQWDLRS 322 (420)
T ss_dssp CCCTTCSSCTTEEEEEEETTSCEEEEETTTCCE---EEEECCTTSSCEEEEEECSSC---TTEEEEEETTSEEEEEETTC
T ss_pred cccceEEcCCCCEEEEEcCCCeEEEEECCCCce---eEEcccccCCCceeEEEeCCC---CCEEEEEeCCCeEEEEEcCC
Confidence 223345556678999999999999999987632 222235688899999999984 23899999999999999976
Q ss_pred CCCcccceEeec-cccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 245 EGDQWEGKVLHD-FKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 245 ~~~~~~~~~~~~-~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
...+ ...+.. +..+|.++ ++|++++|++++.|++|+||++
T Consensus 323 ~~~~--~~~~~~~~~~~v~~~-~~~~~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 323 PECP--VGEFLINEGTPINNV-YFAAGALFVSSGFDTSIKLDII 363 (420)
T ss_dssp TTSC--SEEEEESTTSCEEEE-EEETTEEEEEETTTEEEEEEEE
T ss_pred CcCc--hhhhhccCCCCceEE-EeCCCCEEEEecCCccEEEEec
Confidence 4321 233333 45677777 4568899999999999999995
No 58
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.7e-34 Score=246.19 Aligned_cols=244 Identities=18% Similarity=0.281 Sum_probs=202.4
Q ss_pred cccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCC-ceeeEEEe--ccccCeEEEEecCCCCCCEEEEeeCCCcEEEe
Q 036510 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNT-SQHLAKLS--GHKGAVWEVAWAHPKFGSILASCSFDGTVIIW 84 (288)
Q Consensus 8 ~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~-~~~~~~~~--~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iw 84 (288)
.+|...|.+++|+|++++|++++ |++|++|++.... ...+..+. +|...|.+++|+++ +++|++++.|+.|++|
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD--GCTLIVGGEASTLSIW 124 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTT--SSEEEEEESSSEEEEE
T ss_pred ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCC--CCEEEEEcCCCcEEEE
Confidence 47999999999999999999999 9999999986432 22344444 79999999999864 8899999999999999
Q ss_pred ecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCC
Q 036510 85 KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPG 164 (288)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~ 164 (288)
|+.+... .....+..|...|.+++|+|+ +.++++++.|+.|++||++.+. .......|...+.++.|+|++
T Consensus 125 d~~~~~~-~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~v~~~d~~~~~---~~~~~~~~~~~i~~~~~~~~~--- 195 (337)
T 1gxr_A 125 DLAAPTP-RIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHNQT---LVRQFQGHTDGASCIDISNDG--- 195 (337)
T ss_dssp ECCCC---EEEEEEECSSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECTTS---
T ss_pred ECCCCCc-ceeeecccCCCceEEEEECCC--CCEEEEEeCCCcEEEEeCCCCc---eeeeeecccCceEEEEECCCC---
Confidence 9976542 234556789999999999997 6788999999999999998652 334556788999999999987
Q ss_pred ceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeec
Q 036510 165 ALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAR 244 (288)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~ 244 (288)
++|++++.|+.|++||++++. .+.. ..|...|.+++|+|++ .+|++++.|+.|++||+..
T Consensus 196 -----------~~l~~~~~dg~i~~~d~~~~~----~~~~-~~~~~~v~~~~~s~~~----~~l~~~~~~~~i~~~~~~~ 255 (337)
T 1gxr_A 196 -----------TKLWTGGLDNTVRSWDLREGR----QLQQ-HDFTSQIFSLGYCPTG----EWLAVGMESSNVEVLHVNK 255 (337)
T ss_dssp -----------SEEEEEETTSEEEEEETTTTE----EEEE-EECSSCEEEEEECTTS----SEEEEEETTSCEEEEETTS
T ss_pred -----------CEEEEEecCCcEEEEECCCCc----eEee-ecCCCceEEEEECCCC----CEEEEEcCCCcEEEEECCC
Confidence 789999999999999998763 2222 2467789999999984 7899999999999999875
Q ss_pred CCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 245 EGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 245 ~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
.. ...+..+..+|.+++|+|+|++|++++.|+.|++||.
T Consensus 256 ~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~ 294 (337)
T 1gxr_A 256 PD----KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRT 294 (337)
T ss_dssp SC----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CC----eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEEC
Confidence 42 2345667789999999999999999999999999995
No 59
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=5.4e-35 Score=258.86 Aligned_cols=251 Identities=19% Similarity=0.277 Sum_probs=198.6
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
.+.+|.+.|.+++|+|++++|++|+.|++|++||+... +.+..+.+|...|.+++|+++ +.+|++++.|++|++||
T Consensus 134 ~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd 209 (420)
T 3vl1_A 134 IDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG--SNPRTLIGHRATVTDIAIIDR--GRNVLSASLDGTIRLWE 209 (420)
T ss_dssp ETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--CCCEEEECCSSCEEEEEEETT--TTEEEEEETTSCEEEEE
T ss_pred ecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC--cCceEEcCCCCcEEEEEEcCC--CCEEEEEcCCCcEEEeE
Confidence 45689999999999999999999999999999998643 567888999999999999864 88999999999999999
Q ss_pred cCCCCceEEeEEee---cCCCceeEEE---------------------eccCCCCeEEEEEeCCCcEEEEeecCCCCeee
Q 036510 86 EGNSNEWIKDHVFE---DHKSSVNSID---------------------WAPHELGLCLACGSSDGNISVFTARADGGWDT 141 (288)
Q Consensus 86 ~~~~~~~~~~~~~~---~h~~~v~~l~---------------------~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~ 141 (288)
++++. ....+. .|...+.++. |+|+ +.++++|+.||.|++||++.+.. .
T Consensus 210 ~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~~~--~ 282 (420)
T 3vl1_A 210 CGTGT---TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTY--GKYVIAGHVSGVITVHNVFSKEQ--T 282 (420)
T ss_dssp TTTTE---EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCT--TEEEEEEETTSCEEEEETTTCCE--E
T ss_pred CCCCc---eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCC--CCEEEEEcCCCeEEEEECCCCce--e
Confidence 98664 233343 2444555555 4565 67899999999999999987542 2
Q ss_pred EEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeecccc-CCcceEEEEecCC
Q 036510 142 SRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQM-HTDWVRDVAWAPN 220 (288)
Q Consensus 142 ~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~ 220 (288)
......|...|.++.|+|++. .+|++|+.|+.|++||++++.. .+..+.+ |...|.++.|.+
T Consensus 283 ~~~~~~~~~~v~~~~~~~~~~-------------~~l~~g~~dg~i~vwd~~~~~~---~~~~~~~~~~~~v~~~~~~~- 345 (420)
T 3vl1_A 283 IQLPSKFTCSCNSLTVDGNNA-------------NYIYAGYENGMLAQWDLRSPEC---PVGEFLINEGTPINNVYFAA- 345 (420)
T ss_dssp EEECCTTSSCEEEEEECSSCT-------------TEEEEEETTSEEEEEETTCTTS---CSEEEEESTTSCEEEEEEET-
T ss_pred EEcccccCCCceeEEEeCCCC-------------CEEEEEeCCCeEEEEEcCCCcC---chhhhhccCCCCceEEEeCC-
Confidence 334456888999999999872 3899999999999999987532 2334454 677899986654
Q ss_pred CCCCCcEEEEEeCCCcEEEEEeecCCCc------ccceEeeccccCeEEEEeecCCC---EEEEEeCCCcEEEeEcC
Q 036510 221 LGLPKSTIASASEDGKVIIWTVAREGDQ------WEGKVLHDFKTPVYRVSWSLTGN---ILAVADGNNNVTLWEEA 288 (288)
Q Consensus 221 ~~~~~~~l~s~s~D~~i~iw~~~~~~~~------~~~~~~~~~~~~i~~~~~spdg~---~l~s~~~d~~v~~w~~~ 288 (288)
+.+|++++.|++|++|++.....+ .....+..+...|.+++|+|+|+ .+++++.++.+++|+++
T Consensus 346 ----~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~ 418 (420)
T 3vl1_A 346 ----GALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLS 418 (420)
T ss_dssp ----TEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESC
T ss_pred ----CCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEecc
Confidence 368999999999999999864222 11223445667899999999999 77778889999999864
No 60
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.6e-35 Score=279.85 Aligned_cols=253 Identities=18% Similarity=0.196 Sum_probs=211.7
Q ss_pred CCCCccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCc
Q 036510 1 MPPQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGT 80 (288)
Q Consensus 1 ~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~ 80 (288)
|.+++.+.+|.+.|.+++|+|+|++|++|+.|++|++||+.. ++.+..+.+|...|.+++|+++ +.+|++++.|+.
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~--~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~ 78 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYET--QVEVRSIQVTETPVRAGKFIAR--KNWIIVGSDDFR 78 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEEEGG--GTEEEEEETTSE
T ss_pred cccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCC--CceEEEEecCCCcEEEEEEeCC--CCEEEEEeCCCe
Confidence 345667889999999999999999999999999999999854 4678889999999999999875 889999999999
Q ss_pred EEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCC-
Q 036510 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP- 159 (288)
Q Consensus 81 v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p- 159 (288)
|++|++.++. ....+..|...|.+++|+|+ +.++++|+.|+.|++|+++.+. .......+|...|.++.|+|
T Consensus 79 i~vw~~~~~~---~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~~v~~~~~~p~ 151 (814)
T 3mkq_A 79 IRVFNYNTGE---KVVDFEAHPDYIRSIAVHPT--KPYVLSGSDDLTVKLWNWENNW--ALEQTFEGHEHFVMCVAFNPK 151 (814)
T ss_dssp EEEEETTTCC---EEEEEECCSSCEEEEEECSS--SSEEEEEETTSEEEEEEGGGTS--EEEEEEECCSSCEEEEEEETT
T ss_pred EEEEECCCCc---EEEEEecCCCCEEEEEEeCC--CCEEEEEcCCCEEEEEECCCCc--eEEEEEcCCCCcEEEEEEEcC
Confidence 9999998765 44567789999999999998 5678999999999999997652 23345568899999999999
Q ss_pred CCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccc-cCCcceEEEEecCCCCCCCcEEEEEeCCCcEE
Q 036510 160 STAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQ-MHTDWVRDVAWAPNLGLPKSTIASASEDGKVI 238 (288)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~ 238 (288)
++ ..|++++.|++|++||+.++. ....+. .|...|.+++|+|.. .+.+|++++.|+.|+
T Consensus 152 ~~--------------~~l~~~~~dg~v~vwd~~~~~----~~~~~~~~~~~~v~~~~~~~~~--~~~~l~~~~~dg~i~ 211 (814)
T 3mkq_A 152 DP--------------STFASGCLDRTVKVWSLGQST----PNFTLTTGQERGVNYVDYYPLP--DKPYMITASDDLTIK 211 (814)
T ss_dssp EE--------------EEEEEEETTSEEEEEETTCSS----CSEEEECCCTTCCCEEEECCST--TCCEEEEECTTSEEE
T ss_pred CC--------------CEEEEEeCCCeEEEEECCCCc----ceeEEecCCCCCEEEEEEEECC--CCCEEEEEeCCCEEE
Confidence 44 789999999999999987653 222333 344789999999931 146899999999999
Q ss_pred EEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 239 IWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 239 iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
+||+.... ....+..|..+|.+++|+|+|++|++++.||+|++||.
T Consensus 212 ~~d~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~ 257 (814)
T 3mkq_A 212 IWDYQTKS---CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNS 257 (814)
T ss_dssp EEETTTTE---EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred EEECCCCc---EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 99986432 23444567789999999999999999999999999995
No 61
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.3e-35 Score=255.68 Aligned_cols=256 Identities=15% Similarity=0.265 Sum_probs=197.9
Q ss_pred cccccccceEEEEEcCC----CCEEEEeeCCCcEEEEEeCCCCceeeEEEec-----cccCeEEEEecCCCC--CCEEEE
Q 036510 6 IETGHEDTVHDVAMDYY----GKRLATASSDYSIKIIGVGNNTSQHLAKLSG-----HKGAVWEVAWAHPKF--GSILAS 74 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~----g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~--~~~l~s 74 (288)
+..+|++.|++++|+|+ ...+++++.++.|++|++... +.+..+.. |...|.+++|+++.. +.+|++
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQ--GEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGG--GCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCC--cEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE
Confidence 34489999999999984 466777777889999998632 33444443 567899999987532 679999
Q ss_pred eeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeE
Q 036510 75 CSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTS 154 (288)
Q Consensus 75 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 154 (288)
++.|+.|++||+.++. ....+..|...|.+++|+|++ +.++++|+.|+.|++||++.+...........|...|.+
T Consensus 91 ~~~dg~i~v~d~~~~~---~~~~~~~~~~~i~~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 91 AGSRGIIRIINPITMQ---CIKHYVGHGNAINELKFHPRD-PNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLS 166 (366)
T ss_dssp EETTCEEEEECTTTCC---EEEEEESCCSCEEEEEECSSC-TTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEE
T ss_pred ecCCCEEEEEEchhce---EeeeecCCCCcEEEEEECCCC-CCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeE
Confidence 9999999999997665 455677899999999999932 678999999999999999865322221112578999999
Q ss_pred EEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeee------------------------eeeccccCCc
Q 036510 155 VSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMD------------------------CFPALQMHTD 210 (288)
Q Consensus 155 i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~------------------------~~~~~~~h~~ 210 (288)
+.|+|++ .+|++++.|+.|++||++++..... ......+|..
T Consensus 167 ~~~~~~~--------------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (366)
T 3k26_A 167 ADYDLLG--------------EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRN 232 (366)
T ss_dssp EEECTTS--------------SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSS
T ss_pred EEECCCC--------------CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcc
Confidence 9999987 7899999999999999976421000 0112234999
Q ss_pred ceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCc-----------ccceEeeccccCeEEEEeecC--CCEEEEEe
Q 036510 211 WVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQ-----------WEGKVLHDFKTPVYRVSWSLT--GNILAVAD 277 (288)
Q Consensus 211 ~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~-----------~~~~~~~~~~~~i~~~~~spd--g~~l~s~~ 277 (288)
.|.+++|++ .+|++++.|+.|++||+...... .....+..+...|.+++|+|+ |++|++|+
T Consensus 233 ~v~~~~~~~------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~ 306 (366)
T 3k26_A 233 YVDCVRWLG------DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGN 306 (366)
T ss_dssp CCCEEEEET------TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEEC
T ss_pred eEEEEEEcC------CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEe
Confidence 999999984 48999999999999998764320 112233456678999999999 99999999
Q ss_pred CCCcEEEeEc
Q 036510 278 GNNNVTLWEE 287 (288)
Q Consensus 278 ~d~~v~~w~~ 287 (288)
.|+.|+|||+
T Consensus 307 ~dg~i~vwd~ 316 (366)
T 3k26_A 307 QVGKLYVWDL 316 (366)
T ss_dssp TTSCEEEEEC
T ss_pred cCCcEEEEEC
Confidence 9999999996
No 62
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.1e-35 Score=259.52 Aligned_cols=251 Identities=19% Similarity=0.279 Sum_probs=201.4
Q ss_pred cccccccceEEEEEcCC----C---CEEEEeeCCCcEEEEEeCCCCc---eeeEEEecc-----ccCeEEEEecCC--CC
Q 036510 6 IETGHEDTVHDVAMDYY----G---KRLATASSDYSIKIIGVGNNTS---QHLAKLSGH-----KGAVWEVAWAHP--KF 68 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~----g---~~l~s~~~d~~i~lwd~~~~~~---~~~~~~~~h-----~~~v~~~~~~~~--~~ 68 (288)
.+.+|...|.+++|+|+ | ++|++++.|++|++|++..... ..+..+.+| ...|.+++|++. ++
T Consensus 57 ~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 136 (397)
T 1sq9_A 57 SHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRL 136 (397)
T ss_dssp EEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC---
T ss_pred EEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCC
Confidence 45589999999999999 9 9999999999999999864321 116778888 599999999821 23
Q ss_pred CCE-EEEeeCCCcEEEeecCC------CCceE--EeEEe-------ecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEe
Q 036510 69 GSI-LASCSFDGTVIIWKEGN------SNEWI--KDHVF-------EDHKSSVNSIDWAPHELGLCLACGSSDGNISVFT 132 (288)
Q Consensus 69 ~~~-l~s~s~d~~v~iwd~~~------~~~~~--~~~~~-------~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d 132 (288)
+.+ |++++.|+.|++||+.. ..... ....+ ..|...|.+++|+|+ + ++++|+.|+.|++||
T Consensus 137 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~-~l~~~~~dg~i~i~d 213 (397)
T 1sq9_A 137 LSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER--G-LIATGFNNGTVQISE 213 (397)
T ss_dssp -CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT--S-EEEEECTTSEEEEEE
T ss_pred CceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCC--c-eEEEEeCCCcEEEEE
Confidence 788 99999999999999976 33211 11134 348889999999998 5 899999999999999
Q ss_pred ecCCCCeeeEEeecc---C---CCCeeEEEeCCCCCCCceecccccCCCceeEEeecC---CcEEEEEEeCCceeeeeee
Q 036510 133 ARADGGWDTSRIDQA---H---PVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD---NTVKVWKLYNGIWKMDCFP 203 (288)
Q Consensus 133 ~~~~~~~~~~~~~~~---~---~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~ 203 (288)
++... ....... | ...|.++.|+|++ .+|++++.| +.|++||++++ +.+.
T Consensus 214 ~~~~~---~~~~~~~~~~h~~~~~~i~~i~~~~~~--------------~~l~~~~~d~~~g~i~i~d~~~~----~~~~ 272 (397)
T 1sq9_A 214 LSTLR---PLYNFESQHSMINNSNSIRSVKFSPQG--------------SLLAIAHDSNSFGCITLYETEFG----ERIG 272 (397)
T ss_dssp TTTTE---EEEEEECCC---CCCCCEEEEEECSST--------------TEEEEEEEETTEEEEEEEETTTC----CEEE
T ss_pred CCCCc---eeEEEeccccccccCCccceEEECCCC--------------CEEEEEecCCCCceEEEEECCCC----cccc
Confidence 98653 2333445 7 8899999999987 789999999 99999999876 3455
Q ss_pred cccc-------------CCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEee------cc-------
Q 036510 204 ALQM-------------HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLH------DF------- 257 (288)
Q Consensus 204 ~~~~-------------h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~------~~------- 257 (288)
.+.+ |...|.+++|+|+. .+|++++.|+.|++||+.... ....+. .+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~g 345 (397)
T 1sq9_A 273 SLSVPTHSSQASLGEFAHSSWVMSLSFNDSG----ETLCSAGWDGKLRFWDVKTKE---RITTLNMHCDDIEIEEDILAV 345 (397)
T ss_dssp EECBC--------CCBSBSSCEEEEEECSSS----SEEEEEETTSEEEEEETTTTE---EEEEEECCGGGCSSGGGCCCB
T ss_pred eeccCcccccccccccccCCcEEEEEECCCC----CEEEEEeCCCeEEEEEcCCCc---eeEEEecccCcccchhhhhcc
Confidence 5666 99999999999974 789999999999999987532 123334 45
Q ss_pred --------ccCeEEEEeecCC----------CEEEEEeCCCcEEEeEc
Q 036510 258 --------KTPVYRVSWSLTG----------NILAVADGNNNVTLWEE 287 (288)
Q Consensus 258 --------~~~i~~~~~spdg----------~~l~s~~~d~~v~~w~~ 287 (288)
..+|.+++|+|+| ++|++++.|+.|+||++
T Consensus 346 ~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 346 DEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp CTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred ccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEc
Confidence 7889999999999 79999999999999996
No 63
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=6.6e-35 Score=251.13 Aligned_cols=252 Identities=17% Similarity=0.131 Sum_probs=201.2
Q ss_pred CCCCccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCC-ceeeEEEeccccCeEEEEecCCCCCC-EEEEeeCC
Q 036510 1 MPPQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNT-SQHLAKLSGHKGAVWEVAWAHPKFGS-ILASCSFD 78 (288)
Q Consensus 1 ~~~~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~s~d 78 (288)
|...++..+|++.|.+++|+|++++|++++.|++|++|++.... ......+.+|...|.+++|+++ +. +|++++.|
T Consensus 1 m~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d 78 (342)
T 1yfq_A 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN--TDLQIYVGTVQ 78 (342)
T ss_dssp CEEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEES--SSEEEEEEETT
T ss_pred CcceecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCC--CCcEEEEEcCC
Confidence 44456677999999999999999999999999999999986543 1234556789999999999864 88 99999999
Q ss_pred CcEEEeec-CCCCceEEeEEeec--CCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecC---------CCCeeeEEeec
Q 036510 79 GTVIIWKE-GNSNEWIKDHVFED--HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARA---------DGGWDTSRIDQ 146 (288)
Q Consensus 79 ~~v~iwd~-~~~~~~~~~~~~~~--h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~---------~~~~~~~~~~~ 146 (288)
+.|++|++ ..+. ...+.. |...|.+++|+| +.++++++.|+.|++||++. .... ...
T Consensus 79 g~i~~wd~~~~~~----~~~~~~~~~~~~v~~l~~~~---~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~~- 147 (342)
T 1yfq_A 79 GEILKVDLIGSPS----FQALTNNEANLGICRICKYG---DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNS---NNT- 147 (342)
T ss_dssp SCEEEECSSSSSS----EEECBSCCCCSCEEEEEEET---TTEEEEEETTSEEEEECHHHHTTBCEEEEESCS---SSS-
T ss_pred CeEEEEEeccCCc----eEeccccCCCCceEEEEeCC---CCEEEEEcCCCeEEEEcccccccccccccCCee---eEE-
Confidence 99999998 7654 245677 999999999998 45788999999999999875 3211 112
Q ss_pred cCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeC-CceeeeeeeccccCCcceEEEEecC-CCCCC
Q 036510 147 AHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWKMDCFPALQMHTDWVRDVAWAP-NLGLP 224 (288)
Q Consensus 147 ~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~ 224 (288)
.|...+.++.|+|+. +++++.|+.|++||++. +... .......|...|.+++|+| +.
T Consensus 148 ~~~~~v~~~~~~~~~----------------l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~~~~i~~i~~~~~~~--- 206 (342)
T 1yfq_A 148 KVKNKIFTMDTNSSR----------------LIVGMNNSQVQWFRLPLCEDDN--GTIEESGLKYQIRDVALLPKEQ--- 206 (342)
T ss_dssp SSCCCEEEEEECSSE----------------EEEEESTTEEEEEESSCCTTCC--CEEEECSCSSCEEEEEECSGGG---
T ss_pred eeCCceEEEEecCCc----------------EEEEeCCCeEEEEECCcccccc--ceeeecCCCCceeEEEECCCCC---
Confidence 277889999998752 88999999999999987 4321 1122346788899999999 74
Q ss_pred CcEEEEEeCCCcEEEEEeecCCC---cccceEeecccc---------CeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 225 KSTIASASEDGKVIIWTVAREGD---QWEGKVLHDFKT---------PVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 225 ~~~l~s~s~D~~i~iw~~~~~~~---~~~~~~~~~~~~---------~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
.+|++++.|+.|++|+++.... ......+..+.. +|.+++|+|+|++|++|+.|+.|++||.
T Consensus 207 -~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~ 280 (342)
T 1yfq_A 207 -EGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNL 280 (342)
T ss_dssp -CEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred -CEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcC
Confidence 6899999999999999876410 012233444433 8999999999999999999999999995
No 64
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.5e-34 Score=258.20 Aligned_cols=245 Identities=27% Similarity=0.392 Sum_probs=199.1
Q ss_pred Cccccccccce-EEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEE
Q 036510 4 QKIETGHEDTV-HDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVI 82 (288)
Q Consensus 4 ~~~~~~h~~~v-~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~ 82 (288)
...+.+|.+.| .++.+ ++++|++|+.|++|++||+.. ++.+..+.+|...|++++|+++ + +|++|+.|++|+
T Consensus 114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~--~~~~~~~~~h~~~V~~l~~~~~--~-~l~s~s~dg~i~ 186 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSIN--KKFLLQLSGHDGGVWALKYAHG--G-ILVSGSTDRTVR 186 (464)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEECST--T-EEEEEETTSCEE
T ss_pred eEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCC--CcEEEEEeCCCcCEEEEEEcCC--C-EEEEEeCCCCEE
Confidence 34567898875 55555 578999999999999999854 4778899999999999999753 3 999999999999
Q ss_pred EeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeee--------------------E
Q 036510 83 IWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDT--------------------S 142 (288)
Q Consensus 83 iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~--------------------~ 142 (288)
+||+.++. ....+.+|...|.+++|+|.+.+.++++|+.|++|++||++....... .
T Consensus 187 vwd~~~~~---~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (464)
T 3v7d_B 187 VWDIKKGC---CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFV 263 (464)
T ss_dssp EEETTTTE---EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEE
T ss_pred EEECCCCc---EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEE
Confidence 99998764 456678899999999999765578899999999999999986542211 2
Q ss_pred EeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCC
Q 036510 143 RIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLG 222 (288)
Q Consensus 143 ~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~ 222 (288)
....+|...+.++.. ++ .++++++.|+.|++||+.++ +++..+.+|...|.++.|+|++
T Consensus 264 ~~~~~~~~~v~~~~~--~~--------------~~l~~~~~d~~i~vwd~~~~----~~~~~~~~~~~~v~~~~~~~~~- 322 (464)
T 3v7d_B 264 GVLRGHMASVRTVSG--HG--------------NIVVSGSYDNTLIVWDVAQM----KCLYILSGHTDRIYSTIYDHER- 322 (464)
T ss_dssp EEECCCSSCEEEEEE--ET--------------TEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEEETTT-
T ss_pred EEccCccceEEEEcC--CC--------------CEEEEEeCCCeEEEEECCCC----cEEEEecCCCCCEEEEEEcCCC-
Confidence 334566666666643 22 67999999999999999876 4566778899999999999974
Q ss_pred CCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 223 LPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 223 ~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
.+|++|+.|++|++||++... ....+..|..+|.+++|+ +++|++|+.|++|++||.
T Consensus 323 ---~~l~sg~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~ 379 (464)
T 3v7d_B 323 ---KRCISASMDTTIRIWDLENGE---LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDA 379 (464)
T ss_dssp ---TEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEET
T ss_pred ---CEEEEEeCCCcEEEEECCCCc---EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEEC
Confidence 689999999999999986532 234456778899999997 689999999999999995
No 65
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.1e-34 Score=254.77 Aligned_cols=253 Identities=15% Similarity=0.169 Sum_probs=201.7
Q ss_pred ccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCC----ceeeEEEeccccCeEEEEecCC--CCC---CEEEEe
Q 036510 5 KIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNT----SQHLAKLSGHKGAVWEVAWAHP--KFG---SILASC 75 (288)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~----~~~~~~~~~h~~~v~~~~~~~~--~~~---~~l~s~ 75 (288)
+.+.+|++.|++++|+| ++|++|+.|++|++|++.... .+.+..+.+|...|.+++|+++ .++ .+|+++
T Consensus 10 ~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~ 87 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT 87 (397)
T ss_dssp EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred hhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEE
Confidence 45679999999999998 799999999999999986543 2357888999999999999852 127 899999
Q ss_pred eCCCcEEEeecCCCCc--eEEeEEeecC-----CCceeEEEec----cCCCCeE-EEEEeCCCcEEEEeecC------CC
Q 036510 76 SFDGTVIIWKEGNSNE--WIKDHVFEDH-----KSSVNSIDWA----PHELGLC-LACGSSDGNISVFTARA------DG 137 (288)
Q Consensus 76 s~d~~v~iwd~~~~~~--~~~~~~~~~h-----~~~v~~l~~~----p~~~~~~-l~sg~~d~~i~i~d~~~------~~ 137 (288)
+.|+.|++|++..... ......+..| ...|.+++|+ |+ +.+ +++|+.|+.|++||++. ..
T Consensus 88 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 88 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRL--LSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC------CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred cCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCC--CceEEEEEeCCCcEEEEeCCccccccccc
Confidence 9999999999876542 0113456667 5899999999 76 567 99999999999999987 43
Q ss_pred Cee--eEEee-------ccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeecccc-
Q 036510 138 GWD--TSRID-------QAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQM- 207 (288)
Q Consensus 138 ~~~--~~~~~-------~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~- 207 (288)
... +.... ..|...+.++.|+|++ +|++++.|+.|++||++++ +.+..+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---------------~l~~~~~dg~i~i~d~~~~----~~~~~~~~~ 226 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG---------------LIATGFNNGTVQISELSTL----RPLYNFESQ 226 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS---------------EEEEECTTSEEEEEETTTT----EEEEEEECC
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCc---------------eEEEEeCCCcEEEEECCCC----ceeEEEecc
Confidence 322 11122 4478889999999863 6889999999999999876 34555666
Q ss_pred --C---CcceEEEEecCCCCCCCcEEEEEeCC---CcEEEEEeecCCCcccceEeec-------------cccCeEEEEe
Q 036510 208 --H---TDWVRDVAWAPNLGLPKSTIASASED---GKVIIWTVAREGDQWEGKVLHD-------------FKTPVYRVSW 266 (288)
Q Consensus 208 --h---~~~V~~v~~sp~~~~~~~~l~s~s~D---~~i~iw~~~~~~~~~~~~~~~~-------------~~~~i~~~~~ 266 (288)
| ...|.+++|+|+. .+|++++.| +.|++||+.... ....+.. +..+|.+++|
T Consensus 227 ~~h~~~~~~i~~i~~~~~~----~~l~~~~~d~~~g~i~i~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 299 (397)
T 1sq9_A 227 HSMINNSNSIRSVKFSPQG----SLLAIAHDSNSFGCITLYETEFGE---RIGSLSVPTHSSQASLGEFAHSSWVMSLSF 299 (397)
T ss_dssp C---CCCCCEEEEEECSST----TEEEEEEEETTEEEEEEEETTTCC---EEEEECBC--------CCBSBSSCEEEEEE
T ss_pred ccccccCCccceEEECCCC----CEEEEEecCCCCceEEEEECCCCc---ccceeccCcccccccccccccCCcEEEEEE
Confidence 8 8899999999984 789999999 999999987542 1233444 7789999999
Q ss_pred ecCCCEEEEEeCCCcEEEeEc
Q 036510 267 SLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 267 spdg~~l~s~~~d~~v~~w~~ 287 (288)
+|+|++|++++.|+.|+|||+
T Consensus 300 ~~~~~~l~~~~~dg~i~iwd~ 320 (397)
T 1sq9_A 300 NDSGETLCSAGWDGKLRFWDV 320 (397)
T ss_dssp CSSSSEEEEEETTSEEEEEET
T ss_pred CCCCCEEEEEeCCCeEEEEEc
Confidence 999999999999999999996
No 66
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-34 Score=241.80 Aligned_cols=242 Identities=17% Similarity=0.189 Sum_probs=198.7
Q ss_pred CccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEE
Q 036510 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83 (288)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~i 83 (288)
...+.+|++.|.+++| +++++|++|+.|++|++||+.. .+....+..|...|.+++|+++ +.+|++++.|+.+++
T Consensus 11 ~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDD--QWLGTVVYTGQGFLNSVCYDSE--KELLLFGGKDTMING 85 (313)
T ss_dssp EEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESS--SEEEEEEEECSSCEEEEEEETT--TTEEEEEETTSCEEE
T ss_pred HHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCC--CEEEEEeecCCccEEEEEECCC--CCEEEEecCCCeEEE
Confidence 3456799999999999 8999999999999999999954 3667788899999999999874 899999999999999
Q ss_pred eecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCC
Q 036510 84 WKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163 (288)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~ 163 (288)
|++...........+..|...|.+++|+ +.++++++.|+.|++||. . ........|...+.++.|.|..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~d~~i~~~d~--~---~~~~~~~~~~~~v~~~~~~~~~-- 154 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQGNVCSLSFQ----DGVVISGSWDKTAKVWKE--G---SLVYNLQAHNASVWDAKVVSFS-- 154 (313)
T ss_dssp EETTCCTTSCC-CEECCCSSCEEEEEEE----TTEEEEEETTSEEEEEET--T---EEEEEEECCSSCEEEEEEEETT--
T ss_pred EEeeecCCCCcccchhhcccCEEEEEec----CCEEEEEeCCCCEEEEcC--C---cEEEecccCCCceeEEEEccCC--
Confidence 9987654333445677899999999994 347899999999999992 1 2334556788999999998833
Q ss_pred CceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeecccc-CCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEe
Q 036510 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQM-HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV 242 (288)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~ 242 (288)
...+++++.|+.|++||.. +....+.. |...|.++.|+|+. .+++++.|+.|++||+
T Consensus 155 -----------~~~l~~~~~d~~i~i~d~~------~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~dg~i~i~d~ 212 (313)
T 3odt_A 155 -----------ENKFLTASADKTIKLWQND------KVIKTFSGIHNDVVRHLAVVDDG-----HFISCSNDGLIKLVDM 212 (313)
T ss_dssp -----------TTEEEEEETTSCEEEEETT------EEEEEECSSCSSCEEEEEEEETT-----EEEEEETTSEEEEEET
T ss_pred -----------CCEEEEEECCCCEEEEecC------ceEEEEeccCcccEEEEEEcCCC-----eEEEccCCCeEEEEEC
Confidence 1789999999999999932 23344555 88899999999973 4999999999999998
Q ss_pred ecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 243 AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
+... ....+..|..+|.+++|+|+| +|++++.|+.|++||+
T Consensus 213 ~~~~---~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~ 253 (313)
T 3odt_A 213 HTGD---VLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSK 253 (313)
T ss_dssp TTCC---EEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECT
T ss_pred Cchh---hhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEEC
Confidence 7532 224455677899999999999 5889999999999995
No 67
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.6e-34 Score=285.43 Aligned_cols=251 Identities=20% Similarity=0.324 Sum_probs=211.2
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
.+.+|.+.|++++|+|+|++|++|+.|++|++||+.. ++.+.++.+|...|.+++|+++ +.+|++++.|++|++||
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~--~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAET--GEKLLDIKAHEDEVLCCAFSSD--DSYIATCSADKKVKIWD 685 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--CCEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEE
T ss_pred EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCC--CCEEEEeccCCCCEEEEEEecC--CCEEEEEeCCCeEEEEE
Confidence 4568999999999999999999999999999999854 4678889999999999999865 89999999999999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCc
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGA 165 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~ 165 (288)
+.++. ....+.+|...|.+++|+|+....++++|+.|+.|++||++++.. .....+|...|.++.|+|++
T Consensus 686 ~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~---~~~~~~h~~~v~~~~~sp~~---- 755 (1249)
T 3sfz_A 686 SATGK---LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC---RNTMFGHTNSVNHCRFSPDD---- 755 (1249)
T ss_dssp TTTCC---EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE---EEEECCCSSCEEEEEECSST----
T ss_pred CCCCc---eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch---hheecCCCCCEEEEEEecCC----
Confidence 98765 456778899999999999976677899999999999999987542 34456899999999999987
Q ss_pred eecccccCCCceeEEeecCCcEEEEEEeCCceeee---------------------------------------------
Q 036510 166 LVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMD--------------------------------------------- 200 (288)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~--------------------------------------------- 200 (288)
.++++++.|++|++||+.++.....
T Consensus 756 ----------~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d 825 (1249)
T 3sfz_A 756 ----------ELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFD 825 (1249)
T ss_dssp ----------TEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEE
T ss_pred ----------CEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEE
Confidence 6789999999999999865421100
Q ss_pred -----eeec-cccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEE
Q 036510 201 -----CFPA-LQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILA 274 (288)
Q Consensus 201 -----~~~~-~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~ 274 (288)
.... ..+|...|.++.|+|++ .++++++.|+.|++|++.... ....+.+|..+|.+++|+|+|++|+
T Consensus 826 ~~~~~~~~~~~~~~~~~v~~~~~sp~~----~~l~~~~~dg~v~vwd~~~~~---~~~~~~~h~~~v~~v~~spdg~~l~ 898 (1249)
T 3sfz_A 826 IHTSGLLAEIHTGHHSTIQYCDFSPYD----HLAVIALSQYCVELWNIDSRL---KVADCRGHLSWVHGVMFSPDGSSFL 898 (1249)
T ss_dssp TTTCCEEEEEECSSSSCCCEEEECSST----TEEEEECSSSCEEEEETTTTE---EEEEECCCSSCEEEEEECTTSSEEE
T ss_pred ecCCCceeEEcCCCCCceEEEEEcCCC----CEEEEEeCCCeEEEEEcCCCc---eeeecCCCccceEEEEECCCCCEEE
Confidence 0001 12788889999999974 789999999999999987531 2344567788999999999999999
Q ss_pred EEeCCCcEEEeEc
Q 036510 275 VADGNNNVTLWEE 287 (288)
Q Consensus 275 s~~~d~~v~~w~~ 287 (288)
+++.|++|++|+.
T Consensus 899 s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 899 TASDDQTIRVWET 911 (1249)
T ss_dssp EEETTSCEEEEEH
T ss_pred EEeCCCeEEEEEc
Confidence 9999999999984
No 68
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.9e-34 Score=249.24 Aligned_cols=256 Identities=16% Similarity=0.204 Sum_probs=194.1
Q ss_pred cccccccceEEEEEcCCCCEE-EEeeC---CCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCC-CCCEEEEeeCCCc
Q 036510 6 IETGHEDTVHDVAMDYYGKRL-ATASS---DYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK-FGSILASCSFDGT 80 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l-~s~~~---d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~l~s~s~d~~ 80 (288)
++.+|.+.|.+++|+|+++.+ ++|+. |++|++|++..+.... ....+|...|.+++|+++. ++.+|++++.|+.
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKL-LREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEE-EEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccc-eeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 445799999999999999655 56665 9999999997543222 2234799999999998641 2689999999999
Q ss_pred EEEeecCCCCceEEeEEeecCCCceeEEEecc----CCCCeEEEEEeCCCcEEEEeecCCC-CeeeEEeeccC-CCCeeE
Q 036510 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP----HELGLCLACGSSDGNISVFTARADG-GWDTSRIDQAH-PVGVTS 154 (288)
Q Consensus 81 v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p----~~~~~~l~sg~~d~~i~i~d~~~~~-~~~~~~~~~~~-~~~v~~ 154 (288)
|++||+..... ....+..|...|.+++|.| ...+.++++|+.|+.|++||++.+. .........++ ...+.+
T Consensus 92 i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~ 169 (357)
T 3i2n_A 92 LHIWNLEAPEM--PVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWT 169 (357)
T ss_dssp EEEECTTSCSS--CSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEE
T ss_pred EEEEeCCCCCc--cEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEE
Confidence 99999976542 2345778999999997643 1226789999999999999998764 22222222222 347888
Q ss_pred EE----eCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecC---CCCCCCcE
Q 036510 155 VS----WAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAP---NLGLPKST 227 (288)
Q Consensus 155 i~----~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp---~~~~~~~~ 227 (288)
+. |+|++ .+|++++.|+.|++||++++. . .....|...|.++.|+| + +.+
T Consensus 170 ~~~~~~~~~~~--------------~~l~~~~~d~~i~i~d~~~~~----~-~~~~~~~~~v~~~~~~~~~~~----~~~ 226 (357)
T 3i2n_A 170 VAFGNAYNQEE--------------RVVCAGYDNGDIKLFDLRNMA----L-RWETNIKNGVCSLEFDRKDIS----MNK 226 (357)
T ss_dssp EEEECCCC-CC--------------CEEEEEETTSEEEEEETTTTE----E-EEEEECSSCEEEEEESCSSSS----CCE
T ss_pred EEEEeccCCCC--------------CEEEEEccCCeEEEEECccCc----e-eeecCCCCceEEEEcCCCCCC----CCE
Confidence 88 55554 789999999999999998763 2 22366888999999999 5 468
Q ss_pred EEEEeCCCcEEEEEeecCCCcccc--eEeeccccCeEEEEeecCCC-EEEEEeCCCcEEEeEc
Q 036510 228 IASASEDGKVIIWTVAREGDQWEG--KVLHDFKTPVYRVSWSLTGN-ILAVADGNNNVTLWEE 287 (288)
Q Consensus 228 l~s~s~D~~i~iw~~~~~~~~~~~--~~~~~~~~~i~~~~~spdg~-~l~s~~~d~~v~~w~~ 287 (288)
|++++.|+.|++||++........ .....+...|++++|+|+|+ +|++|+.|+.|+|||+
T Consensus 227 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 289 (357)
T 3i2n_A 227 LVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKY 289 (357)
T ss_dssp EEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEE
T ss_pred EEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeec
Confidence 999999999999999864221111 12236778999999999999 8999999999999995
No 69
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=8.5e-35 Score=255.06 Aligned_cols=247 Identities=15% Similarity=0.161 Sum_probs=186.2
Q ss_pred cccccceEEEEEcC-CCCEEEEeeCCCcEEEEEeCCCCceeeEEEec---cccCeEEEEecCCCCCCEEEEeeCCCcEEE
Q 036510 8 TGHEDTVHDVAMDY-YGKRLATASSDYSIKIIGVGNNTSQHLAKLSG---HKGAVWEVAWAHPKFGSILASCSFDGTVII 83 (288)
Q Consensus 8 ~~h~~~v~~~~~s~-~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~~l~s~s~d~~v~i 83 (288)
.+|...|.+++|+| ++++|++++.|++|++||+.. ..+..+.. |...|.+++|+++ +.+|++++.|+.|++
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i 189 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG---SVIQVFAKTDSWDYWYCCVDVSVS--RQMLATGDSTGRLLL 189 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS---CEEEEEECCCCSSCCEEEEEEETT--TTEEEEEETTSEEEE
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC---CceEEEeccCCCCCCeEEEEECCC--CCEEEEECCCCCEEE
Confidence 37999999999999 679999999999999999964 33444544 4588999999865 889999999999999
Q ss_pred eecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCC-CCC
Q 036510 84 WKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP-STA 162 (288)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p-~~~ 162 (288)
||+. +. ....+..|...|.+++|+|++ ..++++|+.|+.|++||++............+|...|.++.|+| ++
T Consensus 190 ~d~~-~~---~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~- 263 (383)
T 3ei3_B 190 LGLD-GH---EIFKEKLHKAKVTHAEFNPRC-DWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDS- 263 (383)
T ss_dssp EETT-SC---EEEEEECSSSCEEEEEECSSC-TTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTS-
T ss_pred EECC-CC---EEEEeccCCCcEEEEEECCCC-CCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCC-
Confidence 9984 33 445677899999999999984 22799999999999999986321111112226889999999999 76
Q ss_pred CCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeee---ccccCCc----------ceEEEEecCCCCCCCcEEE
Q 036510 163 PGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFP---ALQMHTD----------WVRDVAWAPNLGLPKSTIA 229 (288)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---~~~~h~~----------~V~~v~~sp~~~~~~~~l~ 229 (288)
.+|++++.|+.|++||++++........ ....|.. .+..+.|+|++ .+
T Consensus 264 -------------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg----~~-- 324 (383)
T 3ei3_B 264 -------------TKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDD----QL-- 324 (383)
T ss_dssp -------------CEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCT----TT--
T ss_pred -------------CEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCc----cc--
Confidence 7899999999999999977532111110 0112222 33446666653 33
Q ss_pred EEeCCCcEEEEEeecCCCcccceEeec--cccCeEEEEeecCCCEEEEEeCCCcEEEeEcC
Q 036510 230 SASEDGKVIIWTVAREGDQWEGKVLHD--FKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288 (288)
Q Consensus 230 s~s~D~~i~iw~~~~~~~~~~~~~~~~--~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~~ 288 (288)
+|+.|+.|++||+..... ...+.. +...+..++|+|+|++|++|+ |++|+|||++
T Consensus 325 s~s~d~~i~iwd~~~~~~---~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~ 381 (383)
T 3ei3_B 325 LLNDKRTIDIYDANSGGL---VHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRE 381 (383)
T ss_dssp CTTCCCCEEEEETTTCCE---EEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC
T ss_pred ccCCCCeEEEEecCCCce---eeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecC
Confidence 788999999999875421 223333 345677789999999999997 9999999964
No 70
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-34 Score=251.45 Aligned_cols=247 Identities=16% Similarity=0.249 Sum_probs=201.1
Q ss_pred ccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCC
Q 036510 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGN 88 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~ 88 (288)
+|.+.|.+++|+|+|++|++|+.|+.|++|+. .+..+..+.+|...|.+++|+++ +.+|++++.|+.|++||+.+
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~---~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~ 180 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWNK---TGALLNVLNFHRAPIVSVKWNKD--GTHIISMDVENVTILWNVIS 180 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEET---TSCEEEEECCCCSCEEEEEECTT--SSEEEEEETTCCEEEEETTT
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeC---CCCeeeeccCCCccEEEEEECCC--CCEEEEEecCCeEEEEECCC
Confidence 47889999999999999999999999999994 33567888999999999999864 88999999999999999865
Q ss_pred CCceE-----------------------------------------------------EeEEeecCCCceeEEEeccCCC
Q 036510 89 SNEWI-----------------------------------------------------KDHVFEDHKSSVNSIDWAPHEL 115 (288)
Q Consensus 89 ~~~~~-----------------------------------------------------~~~~~~~h~~~v~~l~~~p~~~ 115 (288)
+.... ....+..|...|.+++|+|+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~-- 258 (425)
T 1r5m_A 181 GTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDT-- 258 (425)
T ss_dssp TEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETT--
T ss_pred CcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCC--
Confidence 32110 01234468889999999998
Q ss_pred CeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCC
Q 036510 116 GLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNG 195 (288)
Q Consensus 116 ~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 195 (288)
+.++++++.|+.|++||++..... .....|...+.++.|+|++ ++++++.|+.|++||+.++
T Consensus 259 ~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~~i~~~~~~~~~---------------~l~~~~~d~~i~i~d~~~~ 320 (425)
T 1r5m_A 259 NKLLLSASDDGTLRIWHGGNGNSQ---NCFYGHSQSIVSASWVGDD---------------KVISCSMDGSVRLWSLKQN 320 (425)
T ss_dssp TTEEEEEETTSCEEEECSSSBSCS---EEECCCSSCEEEEEEETTT---------------EEEEEETTSEEEEEETTTT
T ss_pred CCEEEEEcCCCEEEEEECCCCccc---eEecCCCccEEEEEECCCC---------------EEEEEeCCCcEEEEECCCC
Confidence 568999999999999999865432 3345788899999999863 6889999999999999876
Q ss_pred ceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCc-----------------ccceEeeccc
Q 036510 196 IWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQ-----------------WEGKVLHDFK 258 (288)
Q Consensus 196 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~-----------------~~~~~~~~~~ 258 (288)
+++..+..|...|.+++|+|++ .+|++++.|+.|++||+...... .....+..+.
T Consensus 321 ----~~~~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (425)
T 1r5m_A 321 ----TLLALSIVDGVPIFAGRISQDG----QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQ 392 (425)
T ss_dssp ----EEEEEEECTTCCEEEEEECTTS----SEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTT
T ss_pred ----cEeEecccCCccEEEEEEcCCC----CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcc
Confidence 3555667889999999999984 78999999999999999753200 0123344554
Q ss_pred c--CeEEEEeecCCCEEEEEeCCCcEEEeEcC
Q 036510 259 T--PVYRVSWSLTGNILAVADGNNNVTLWEEA 288 (288)
Q Consensus 259 ~--~i~~~~~spdg~~l~s~~~d~~v~~w~~~ 288 (288)
. .|.+++|+|+|++|++++.|+.|+||+++
T Consensus 393 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 393 DNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred cCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 4 89999999999999999999999999974
No 71
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.3e-34 Score=246.10 Aligned_cols=215 Identities=26% Similarity=0.359 Sum_probs=177.6
Q ss_pred eeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCc--eEEeEEeecCCCceeEEEeccCCCCeEEEEEe
Q 036510 46 QHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNE--WIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123 (288)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~ 123 (288)
....++.+|.+.|++++|+++ .+++|+|||.|++|++|++..... ......+.+|...|.+++|+|+ +.++++|+
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~-~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~d--g~~l~s~s 84 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAG-QPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTAD--GAYALSAS 84 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSS-CTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTT--SSEEEEEE
T ss_pred EEEEEEccccceEEEEEccCC-CccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCC--CCEEEEEe
Confidence 446778999999999999864 368999999999999999854221 1245678899999999999998 67899999
Q ss_pred CCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeee
Q 036510 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFP 203 (288)
Q Consensus 124 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 203 (288)
.|++|++||++++. ......+|...|.++.|+|++ .+|++|+.|++|++||++. +++.
T Consensus 85 ~D~~v~~wd~~~~~---~~~~~~~h~~~v~~~~~~~~~--------------~~l~s~s~D~~i~vwd~~~-----~~~~ 142 (319)
T 3frx_A 85 WDKTLRLWDVATGE---TYQRFVGHKSDVMSVDIDKKA--------------SMIISGSRDKTIKVWTIKG-----QCLA 142 (319)
T ss_dssp TTSEEEEEETTTTE---EEEEEECCSSCEEEEEECTTS--------------CEEEEEETTSCEEEEETTS-----CEEE
T ss_pred CCCEEEEEECCCCC---eeEEEccCCCcEEEEEEcCCC--------------CEEEEEeCCCeEEEEECCC-----CeEE
Confidence 99999999998753 234557899999999999987 7899999999999999865 3456
Q ss_pred ccccCCcceEEEEecCCCCC--CCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCc
Q 036510 204 ALQMHTDWVRDVAWAPNLGL--PKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNN 281 (288)
Q Consensus 204 ~~~~h~~~V~~v~~sp~~~~--~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~ 281 (288)
.+.+|...|.++.|+|.... .+.+|++++.|++|++||++... ....+.+|..+|.+++|+|+|++|++|+.|++
T Consensus 143 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~---~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~ 219 (319)
T 3frx_A 143 TLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ---IEADFIGHNSNINTLTASPDGTLIASAGKDGE 219 (319)
T ss_dssp EECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE---EEEEECCCCSCEEEEEECTTSSEEEEEETTCE
T ss_pred EEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch---hheeecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 77899999999999996321 23589999999999999987431 22345678889999999999999999999999
Q ss_pred EEEeEcC
Q 036510 282 VTLWEEA 288 (288)
Q Consensus 282 v~~w~~~ 288 (288)
|+|||++
T Consensus 220 i~iwd~~ 226 (319)
T 3frx_A 220 IMLWNLA 226 (319)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 9999953
No 72
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-35 Score=259.97 Aligned_cols=255 Identities=14% Similarity=0.114 Sum_probs=191.8
Q ss_pred cccccceEEEEEcC-CCCEEEEeeCCCcEEEEEeCC---CC-ceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEE
Q 036510 8 TGHEDTVHDVAMDY-YGKRLATASSDYSIKIIGVGN---NT-SQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVI 82 (288)
Q Consensus 8 ~~h~~~v~~~~~s~-~g~~l~s~~~d~~i~lwd~~~---~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~ 82 (288)
.+|++.|.+++|+| +|++|++|+.|++|++||+.. .. .+....+ +|...|++++|+++ +.+|++++.|++|+
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~--~~~l~s~s~dg~i~ 136 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPN--FDAFAVSSKDGQII 136 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTT--SSEEEEEETTSEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCC--CCEEEEEeCCCEEE
Confidence 68999999999999 999999999999999999853 21 1123333 59999999999864 88999999999999
Q ss_pred EeecC---CCCceE-----EeEEe--ec--CCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeecc--C
Q 036510 83 IWKEG---NSNEWI-----KDHVF--ED--HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQA--H 148 (288)
Q Consensus 83 iwd~~---~~~~~~-----~~~~~--~~--h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~--~ 148 (288)
+||+. .+.... ....+ .. +...+.++.+...+.+.++++|+.|+.|++||++.+.. ...... |
T Consensus 137 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~h 213 (437)
T 3gre_A 137 VLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER---LQIIENSPR 213 (437)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE---EEEEECCGG
T ss_pred EEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee---eEEEccCCC
Confidence 99984 332110 01111 11 45566777644333478899999999999999987543 223334 7
Q ss_pred CCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccc-cCCcceEEEEecCCCCCCCcE
Q 036510 149 PVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQ-MHTDWVRDVAWAPNLGLPKST 227 (288)
Q Consensus 149 ~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~h~~~V~~v~~sp~~~~~~~~ 227 (288)
...|.++.|+|++ .+|++|+.|++|++||++++ +++..+. .|...|.++.|+|.....+.+
T Consensus 214 ~~~v~~~~~s~~~--------------~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~v~~~~~~~~~s~~~~~ 275 (437)
T 3gre_A 214 HGAVSSICIDEEC--------------CVLILGTTRGIIDIWDIRFN----VLIRSWSFGDHAPITHVEVCQFYGKNSVI 275 (437)
T ss_dssp GCCEEEEEECTTS--------------CEEEEEETTSCEEEEETTTT----EEEEEEBCTTCEEEEEEEECTTTCTTEEE
T ss_pred CCceEEEEECCCC--------------CEEEEEcCCCeEEEEEcCCc----cEEEEEecCCCCceEEEEeccccCCCccE
Confidence 7899999999986 78999999999999999876 3445554 677899999888754333568
Q ss_pred EEEEeCCCcEEEEEeecCCCcccce---------------------Eeec--cccCeEEEEeecCCCEEEEEeCCCcEEE
Q 036510 228 IASASEDGKVIIWTVAREGDQWEGK---------------------VLHD--FKTPVYRVSWSLTGNILAVADGNNNVTL 284 (288)
Q Consensus 228 l~s~s~D~~i~iw~~~~~~~~~~~~---------------------~~~~--~~~~i~~~~~spdg~~l~s~~~d~~v~~ 284 (288)
|++|+.|++|++||++......... .+.+ +...|.+++|+ ++++|++|+.|++|++
T Consensus 276 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~ 354 (437)
T 3gre_A 276 VVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVM 354 (437)
T ss_dssp EEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEE
T ss_pred EEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEE
Confidence 9999999999999987432100000 0111 55678999999 8899999999999999
Q ss_pred eEc
Q 036510 285 WEE 287 (288)
Q Consensus 285 w~~ 287 (288)
||+
T Consensus 355 wd~ 357 (437)
T 3gre_A 355 FSL 357 (437)
T ss_dssp EET
T ss_pred EEC
Confidence 995
No 73
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.8e-35 Score=250.47 Aligned_cols=225 Identities=28% Similarity=0.441 Sum_probs=180.6
Q ss_pred cccccccceEEEEEcC--CCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEE
Q 036510 6 IETGHEDTVHDVAMDY--YGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~--~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~i 83 (288)
.+.+|++.|.+++|++ +|++|+||+.|++|++||+..+..+.+..+.+|...|++++|+++..+.+|++++.|++|++
T Consensus 52 ~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~l 131 (316)
T 3bg1_A 52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131 (316)
T ss_dssp EEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEE
T ss_pred EEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEE
Confidence 3569999999999986 48999999999999999986543345677889999999999987645789999999999999
Q ss_pred eecCCCCceEEeEEeecCCCceeEEEeccCCC---------------CeEEEEEeCCCcEEEEeecCCCCeeeEEeeccC
Q 036510 84 WKEGNSNEWIKDHVFEDHKSSVNSIDWAPHEL---------------GLCLACGSSDGNISVFTARADGGWDTSRIDQAH 148 (288)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~---------------~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~ 148 (288)
|++.....+.....+.+|...|.+++|+|+.. +.++++|+.|++|++||++....+......++|
T Consensus 132 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h 211 (316)
T 3bg1_A 132 LTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAH 211 (316)
T ss_dssp EEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCC
T ss_pred EecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccC
Confidence 99976544433455678999999999999731 357999999999999999765444455567789
Q ss_pred CCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEE
Q 036510 149 PVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTI 228 (288)
Q Consensus 149 ~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l 228 (288)
...|.++.|+|++.. +..+|++++.|++|+|||+.+..........+..|...|.+++|+|++ .+|
T Consensus 212 ~~~V~~v~~sp~~~~----------~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g----~~l 277 (316)
T 3bg1_A 212 SDWVRDVAWAPSIGL----------PTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITA----NIL 277 (316)
T ss_dssp SSCEEEEECCCCSSC----------SCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTT----CCE
T ss_pred CCceEEEEecCCCCC----------CCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCC----CEE
Confidence 999999999998521 125799999999999999876211101122346788999999999984 689
Q ss_pred EEEeCCCcEEEEEeec
Q 036510 229 ASASEDGKVIIWTVAR 244 (288)
Q Consensus 229 ~s~s~D~~i~iw~~~~ 244 (288)
|+++.|++|++|+...
T Consensus 278 as~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 278 AVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEESSSCEEEEEECT
T ss_pred EEEcCCCeEEEEEECC
Confidence 9999999999999763
No 74
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-35 Score=260.62 Aligned_cols=253 Identities=19% Similarity=0.334 Sum_probs=200.3
Q ss_pred ccccceEEEEEcCCCC-EEEEe----------eCCCcEEEEEeCCCCc-eeeEEEeccccCeEEEEecCCCCCCEEEEee
Q 036510 9 GHEDTVHDVAMDYYGK-RLATA----------SSDYSIKIIGVGNNTS-QHLAKLSGHKGAVWEVAWAHPKFGSILASCS 76 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~-~l~s~----------~~d~~i~lwd~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s 76 (288)
.+...|.+++|+|+|+ +|++| +.|++|++|++..... +.+.. ..|...|.+++|+++ +.+|++++
T Consensus 10 ~~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~~v~~~~~s~~--~~~l~~~~ 86 (416)
T 2pm9_A 10 AEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIAS-LQVDSKFNDLDWSHN--NKIIAGAL 86 (416)
T ss_dssp CEEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCC-CCCSSCEEEEEECSS--SSCEEEEE
T ss_pred hhhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEE-EecCCceEEEEECCC--CCeEEEEc
Confidence 3556788999999986 99999 8999999999864321 12333 358999999999864 88999999
Q ss_pred CCCcEEEeecCCCCc-eEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCC------CeeeEEeeccCC
Q 036510 77 FDGTVIIWKEGNSNE-WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADG------GWDTSRIDQAHP 149 (288)
Q Consensus 77 ~d~~v~iwd~~~~~~-~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~------~~~~~~~~~~~~ 149 (288)
.|+.|++|++..... ......+..|...|.+++|+|++ +.++++++.|+.|++||++... ..........|.
T Consensus 87 ~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 165 (416)
T 2pm9_A 87 DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQ-DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSV 165 (416)
T ss_dssp SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSS-TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSS
T ss_pred cCCeEEEeecccccccccchhhccCCccceEEEEEcCCC-CCEEEEEcCCCeEEEEECCCCccccccccccccccccCCC
Confidence 999999999876211 11455677899999999999974 4578999999999999998754 221222335688
Q ss_pred CCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccC------CcceEEEEecCCCCC
Q 036510 150 VGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMH------TDWVRDVAWAPNLGL 223 (288)
Q Consensus 150 ~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h------~~~V~~v~~sp~~~~ 223 (288)
..|.++.|+|++. .+|++++.|+.|++||++++. .+..+..| ...|.+++|+|+.
T Consensus 166 ~~v~~~~~~~~~~-------------~~l~~~~~dg~v~iwd~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~-- 226 (416)
T 2pm9_A 166 DEVISLAWNQSLA-------------HVFASAGSSNFASIWDLKAKK----EVIHLSYTSPNSGIKQQLSVVEWHPKN-- 226 (416)
T ss_dssp CCCCEEEECSSCT-------------TEEEEESSSSCEEEEETTTTE----EEEEECCCCCSSCCCCCEEEEEECSSC--
T ss_pred CCeeEEEeCCCCC-------------cEEEEEcCCCCEEEEECCCCC----cceEEeccccccccCCceEEEEECCCC--
Confidence 8999999999842 689999999999999998763 33334433 7889999999984
Q ss_pred CCcEEEEEeCCC---cEEEEEeecCCCcccceEee-ccccCeEEEEeec-CCCEEEEEeCCCcEEEeEc
Q 036510 224 PKSTIASASEDG---KVIIWTVAREGDQWEGKVLH-DFKTPVYRVSWSL-TGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 224 ~~~~l~s~s~D~---~i~iw~~~~~~~~~~~~~~~-~~~~~i~~~~~sp-dg~~l~s~~~d~~v~~w~~ 287 (288)
..+|++++.|+ .|++||++..... ...+. .|...|.+++|+| ++++|++++.|++|+|||+
T Consensus 227 -~~~l~~~~~d~~~~~i~~~d~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~ 292 (416)
T 2pm9_A 227 -STRVATATGSDNDPSILIWDLRNANTP--LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNP 292 (416)
T ss_dssp -TTEEEEEECCSSSCCCCEEETTSTTSC--SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECS
T ss_pred -CCEEEEEECCCCCceEEEEeCCCCCCC--cEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeC
Confidence 36899999999 9999998764221 23344 6778999999999 9999999999999999995
No 75
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.3e-33 Score=238.91 Aligned_cols=247 Identities=21% Similarity=0.365 Sum_probs=198.2
Q ss_pred cccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecC
Q 036510 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEG 87 (288)
Q Consensus 8 ~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~ 87 (288)
.+|...|.+++|+|+|++|++|+.|++|++|++.. ++.+..+.+|...+.++.+. +.++++++.++.+++|+..
T Consensus 64 ~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~--~~~~~~~~~h~~~~~~~~~~----~~~l~s~~~~~~~~~~~~~ 137 (318)
T 4ggc_A 64 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ--QKRLRNMTSHSARVGSLSWN----SYILSSGSRSGHIHHHDVR 137 (318)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEEE----TTEEEEEETTSEEEEEETT
T ss_pred cCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCC--ceeEEEecCccceEEEeecC----CCEEEEEecCCceEeeecC
Confidence 47889999999999999999999999999999854 47788999999999887764 6799999999999999986
Q ss_pred CCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCe-eeEEeeccCCCCeeEEEeCCCCCCCce
Q 036510 88 NSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGW-DTSRIDQAHPVGVTSVSWAPSTAPGAL 166 (288)
Q Consensus 88 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~v~~i~~~p~~~~~~~ 166 (288)
.... ....+.+|...+.++.++++ +.++++++.|+.|++||++.+... ........|...|.++.++|.....
T Consensus 138 ~~~~--~~~~~~~~~~~~~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-- 211 (318)
T 4ggc_A 138 VAEH--HVATLSGHSQEVCGLRWAPD--GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNV-- 211 (318)
T ss_dssp SSSC--EEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTE--
T ss_pred CCce--eEEEEcCccCceEEEEEcCC--CCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcE--
Confidence 6543 44567789999999999987 678999999999999999865422 1223345677889999999986310
Q ss_pred ecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEE--eCCCcEEEEEeec
Q 036510 167 VGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA--SEDGKVIIWTVAR 244 (288)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~--s~D~~i~iw~~~~ 244 (288)
-.+++++.+++|++||...... .....+...+..+.|+|+. ..++++ +.|++|++||++.
T Consensus 212 ---------~~~~~~~~~~~i~lwd~~~~~~-----~~~~~~~~~v~~~~~~~~~----~~~~~~sg~~d~~i~iwd~~~ 273 (318)
T 4ggc_A 212 ---------LATGGGTSDRHIRIWNVCSGAC-----LSAVDAHSQVCSILWSPHY----KELISGHGFAQNQLVIWKYPT 273 (318)
T ss_dssp ---------EEEEECTTTCEEEEEETTTCCE-----EEEEECSSCEEEEEEETTT----TEEEEEECTTTCCEEEEETTT
T ss_pred ---------EEEEecCCCCEEEEEecccccc-----cccccceeeeeeeeecccc----cceEEEEEcCCCEEEEEECCC
Confidence 1245778899999999876531 1224466679999999974 445544 4799999999875
Q ss_pred CCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 245 EGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 245 ~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
.+ ....+.+|.++|++++|+|||++|++|+.|++|+|||+
T Consensus 274 ~~---~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 274 MA---KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp CC---EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred Cc---EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 42 23456778899999999999999999999999999995
No 76
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.7e-35 Score=261.39 Aligned_cols=251 Identities=19% Similarity=0.233 Sum_probs=166.1
Q ss_pred cccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCc---eeeEEEeccccCeEEEEecC------CCCCCEEEEeeCCCc
Q 036510 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTS---QHLAKLSGHKGAVWEVAWAH------PKFGSILASCSFDGT 80 (288)
Q Consensus 10 h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~---~~~~~~~~h~~~v~~~~~~~------~~~~~~l~s~s~d~~ 80 (288)
|...+....+++++++|++|+.|++|+|||...+.. ..+..+.||.+.|++++|++ +.++++|+|+|.|++
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t 167 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT 167 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe
Confidence 344444444556778899999999999999865422 23445789999999999985 125789999999999
Q ss_pred EEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeE------------------
Q 036510 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTS------------------ 142 (288)
Q Consensus 81 v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~------------------ 142 (288)
|+|||+.+.. ....+..|..+|.+++|+|++ ..++++|+.|++|++||++.+......
T Consensus 168 v~~Wd~~~~~---~~~~~~~~~~~v~~v~~~p~~-~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~ 243 (393)
T 4gq1_A 168 LIIWRLTDEG---PILAGYPLSSPGISVQFRPSN-PNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP 243 (393)
T ss_dssp EEEEEEETTE---EEEEEEECSSCEEEEEEETTE-EEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG
T ss_pred EEEEECCCCc---eeeeecCCCCCcEEEEECCCC-CceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc
Confidence 9999997654 334455688899999999984 457999999999999999865321110
Q ss_pred ----EeeccCCCCeeEEEeC-CCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEe
Q 036510 143 ----RIDQAHPVGVTSVSWA-PSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAW 217 (288)
Q Consensus 143 ----~~~~~~~~~v~~i~~~-p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~ 217 (288)
....+|...+.++.|+ |++ ..+++++.|+++++||+..+. ....+..|...+..+.+
T Consensus 244 ~~~~~~~~~~~~~v~~v~~~~~dg--------------~~l~s~s~d~~i~vwd~~~~~----~~~~l~~~~~~~~~~~~ 305 (393)
T 4gq1_A 244 LVNTCHSSGIASSLANVRWIGSDG--------------SGILAMCKSGAWLRWNLFANN----DYNEISDSTMKLGPKNL 305 (393)
T ss_dssp GC------CCSSSCSEEEEETTTT--------------CEEEEECTTSEEEEEEC-----------------------CC
T ss_pred ceeeeecccccccceeeeeecCCC--------------CEEEEEeCCCCEEEEECccCC----CCceEeeecCccccEEE
Confidence 0123456667777765 443 789999999999999997652 22233444444444444
Q ss_pred cCCCC----------------CCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCc
Q 036510 218 APNLG----------------LPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNN 281 (288)
Q Consensus 218 sp~~~----------------~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~ 281 (288)
.|+.. ..+.++++|+.|++|++||+..... .....++..+|.+++|||||++||+++.+|
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~---~~~~~~~~~~V~svafspdG~~LA~as~~G- 381 (393)
T 4gq1_A 306 LPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDS---NSIPIQLGMPIVDFCWHQDGSHLAIATEGS- 381 (393)
T ss_dssp SCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTC---CEEEEECSSCEEEEEECTTSSEEEEEESSE-
T ss_pred ccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcE---EEEecCCCCcEEEEEEcCCCCEEEEEeCCC-
Confidence 44210 0234678889999999999875432 233456778999999999999999998766
Q ss_pred EEEeE
Q 036510 282 VTLWE 286 (288)
Q Consensus 282 v~~w~ 286 (288)
+.||+
T Consensus 382 v~lvr 386 (393)
T 4gq1_A 382 VLLTR 386 (393)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 44554
No 77
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.6e-33 Score=242.71 Aligned_cols=256 Identities=16% Similarity=0.219 Sum_probs=193.6
Q ss_pred CccccccccceEEEEEcCC---CCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCc
Q 036510 4 QKIETGHEDTVHDVAMDYY---GKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGT 80 (288)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~~---g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~ 80 (288)
..++.+|.+.|++++|+|+ |++|++|+.|++|++|++..........+.+|...|.+++|+++ +++|++++.|+.
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~ 109 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDD--GSKVFTASCDKT 109 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTT--SSEEEEEETTSE
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcC--CCEEEEEcCCCc
Confidence 3466799999999999999 69999999999999999965333444788999999999999864 889999999999
Q ss_pred EEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCC
Q 036510 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160 (288)
Q Consensus 81 v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~ 160 (288)
|++||+.++. . ..+..|...|.+++|+|...+.++++++.|+.|++||++.+...... ..+ ..+.++.+.+
T Consensus 110 v~iwd~~~~~---~-~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~---~~~-~~~~~~~~~~- 180 (368)
T 3mmy_A 110 AKMWDLSSNQ---A-IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVL---QLP-ERCYCADVIY- 180 (368)
T ss_dssp EEEEETTTTE---E-EEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEE---ECS-SCEEEEEEET-
T ss_pred EEEEEcCCCC---c-eeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEE---ecC-CCceEEEecC-
Confidence 9999997654 2 23456999999999944444788999999999999999876543322 222 3566666654
Q ss_pred CCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEE
Q 036510 161 TAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240 (288)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw 240 (288)
..++.++.++.+++||+............ .+...+.++.+.++....+..+++++.|+.|++|
T Consensus 181 ---------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~ 243 (368)
T 3mmy_A 181 ---------------PMAVVATAERGLIVYQLENQPSEFRRIES--PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIH 243 (368)
T ss_dssp ---------------TEEEEEEGGGCEEEEECSSSCEEEEECCC--SCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEE
T ss_pred ---------------CeeEEEeCCCcEEEEEeccccchhhhccc--cccCCCceEEEcccCCCCCCeEEEecCCCcEEEE
Confidence 34778888999999999876433333222 2333456666665432223459999999999999
Q ss_pred EeecCCCcccceEeecccc------------CeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 241 TVAREGDQWEGKVLHDFKT------------PVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~------------~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
+++..........+..+.. +|.+++|+|+|++|++|+.|+.|+|||+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~ 302 (368)
T 3mmy_A 244 YINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDK 302 (368)
T ss_dssp ESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred ecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEEC
Confidence 9976432122233344443 6999999999999999999999999995
No 78
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-33 Score=249.40 Aligned_cols=245 Identities=16% Similarity=0.271 Sum_probs=190.5
Q ss_pred ccccceEEEEEcCCCC-EEEEeeCCCcEEEEEe----CCCCc----eeeEEEec----------cccCeEEEEecCCCCC
Q 036510 9 GHEDTVHDVAMDYYGK-RLATASSDYSIKIIGV----GNNTS----QHLAKLSG----------HKGAVWEVAWAHPKFG 69 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~-~l~s~~~d~~i~lwd~----~~~~~----~~~~~~~~----------h~~~v~~~~~~~~~~~ 69 (288)
.|.+.|.+++|+|+|+ +|++|+.|++|++|++ ..+.. .....+.. |...|.+++|+++ +
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~ 120 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHD--G 120 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTT--S
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCC--C
Confidence 4569999999999999 9999999999999999 54321 02333333 6889999999864 8
Q ss_pred CEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeE-------
Q 036510 70 SILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTS------- 142 (288)
Q Consensus 70 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~------- 142 (288)
.+|++++.|+.|++|+. ++. ....+..|...|.+++|+|+ +.++++++.|+.|++||++.+......
T Consensus 121 ~~l~~~~~dg~i~i~~~-~~~---~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 194 (425)
T 1r5m_A 121 NSIVTGVENGELRLWNK-TGA---LLNVLNFHRAPIVSVKWNKD--GTHIISMDVENVTILWNVISGTVMQHFELKETGG 194 (425)
T ss_dssp SEEEEEETTSCEEEEET-TSC---EEEEECCCCSCEEEEEECTT--SSEEEEEETTCCEEEEETTTTEEEEEECCC----
T ss_pred CEEEEEeCCCeEEEEeC-CCC---eeeeccCCCccEEEEEECCC--CCEEEEEecCCeEEEEECCCCcEEEEeeccccCc
Confidence 99999999999999993 333 44567789999999999997 567899999999999998754221110
Q ss_pred ----------------------------------------------EeeccCCCCeeEEEeCCCCCCCceecccccCCCc
Q 036510 143 ----------------------------------------------RIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQ 176 (288)
Q Consensus 143 ----------------------------------------------~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~ 176 (288)
.....|...|.++.|+|++ .
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~--------------~ 260 (425)
T 1r5m_A 195 SSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTN--------------K 260 (425)
T ss_dssp -----------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTT--------------T
T ss_pred cceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCC--------------C
Confidence 0112344455555555544 7
Q ss_pred eeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeec
Q 036510 177 KLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHD 256 (288)
Q Consensus 177 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~ 256 (288)
+|++++.|+.|++||+..+ +....+.+|...|.++.|+|+ + +|++++.|+.|++||+.... ....+..
T Consensus 261 ~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~i~~~~~~~~----~-~l~~~~~d~~i~i~d~~~~~---~~~~~~~ 328 (425)
T 1r5m_A 261 LLLSASDDGTLRIWHGGNG----NSQNCFYGHSQSIVSASWVGD----D-KVISCSMDGSVRLWSLKQNT---LLALSIV 328 (425)
T ss_dssp EEEEEETTSCEEEECSSSB----SCSEEECCCSSCEEEEEEETT----T-EEEEEETTSEEEEEETTTTE---EEEEEEC
T ss_pred EEEEEcCCCEEEEEECCCC----ccceEecCCCccEEEEEECCC----C-EEEEEeCCCcEEEEECCCCc---EeEeccc
Confidence 8999999999999998765 345566789999999999997 3 89999999999999986432 2234456
Q ss_pred cccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 257 FKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 257 ~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
+..+|.+++|+|+|++|++++.|+.|+|||+
T Consensus 329 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~ 359 (425)
T 1r5m_A 329 DGVPIFAGRISQDGQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred CCccEEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 6789999999999999999999999999995
No 79
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.2e-33 Score=253.77 Aligned_cols=244 Identities=21% Similarity=0.280 Sum_probs=201.7
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
.+.+|++.|.+++|++++ +|++|+.|++|++||+.. ++.+..+.+|...|.+++|++.+++.+|++++.|++|++||
T Consensus 157 ~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~--~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd 233 (464)
T 3v7d_B 157 QLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK--GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 233 (464)
T ss_dssp EECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEE
T ss_pred EEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC--CcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEee
Confidence 355899999999999988 999999999999999854 46788899999999999998644578999999999999999
Q ss_pred cCCCCceE--------------------EeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEee
Q 036510 86 EGNSNEWI--------------------KDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRID 145 (288)
Q Consensus 86 ~~~~~~~~--------------------~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~ 145 (288)
+....... ....+.+|...|.++. |+ +.++++|+.|+.|++||+++.. .....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~--~~~l~~~~~d~~i~vwd~~~~~---~~~~~ 306 (464)
T 3v7d_B 234 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--GH--GNIVVSGSYDNTLIVWDVAQMK---CLYIL 306 (464)
T ss_dssp CCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--EE--TTEEEEEETTSCEEEEETTTTE---EEEEE
T ss_pred CCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--CC--CCEEEEEeCCCeEEEEECCCCc---EEEEe
Confidence 87643211 1345678888898885 43 4579999999999999998643 33455
Q ss_pred ccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCC
Q 036510 146 QAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPK 225 (288)
Q Consensus 146 ~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~ 225 (288)
.+|...|.++.|+|++ ..+++|+.|++|++||++++ +++..+.+|...|.++.|++
T Consensus 307 ~~~~~~v~~~~~~~~~--------------~~l~sg~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~~------ 362 (464)
T 3v7d_B 307 SGHTDRIYSTIYDHER--------------KRCISASMDTTIRIWDLENG----ELMYTLQGHTALVGLLRLSD------ 362 (464)
T ss_dssp CCCSSCEEEEEEETTT--------------TEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEECS------
T ss_pred cCCCCCEEEEEEcCCC--------------CEEEEEeCCCcEEEEECCCC----cEEEEEeCCCCcEEEEEEcC------
Confidence 6899999999999987 78999999999999999876 45667889999999999985
Q ss_pred cEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEcC
Q 036510 226 STIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288 (288)
Q Consensus 226 ~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~~ 288 (288)
.+|++|+.|++|++||+..... .....+...+..++|+|+++++++|+ |+.|+|||++
T Consensus 363 ~~l~s~s~dg~v~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~ 420 (464)
T 3v7d_B 363 KFLVSAAADGSIRGWDANDYSR----KFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR 420 (464)
T ss_dssp SEEEEEETTSEEEEEETTTCCE----EEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETT
T ss_pred CEEEEEeCCCcEEEEECCCCce----eeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECC
Confidence 4799999999999999875321 12223455678899999999999998 8999999953
No 80
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.6e-33 Score=239.34 Aligned_cols=223 Identities=24% Similarity=0.339 Sum_probs=178.3
Q ss_pred ccccccccceEEEEEcC--CCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEE
Q 036510 5 KIETGHEDTVHDVAMDY--YGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVI 82 (288)
Q Consensus 5 ~~~~~h~~~v~~~~~s~--~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~ 82 (288)
..+.+|++.|.+++|++ +|++|+||+.|++|++||+..+....+..+.+|...|.+++|+++..+.+|++++.|++|+
T Consensus 47 ~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~ 126 (297)
T 2pm7_B 47 DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVS 126 (297)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred EEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEE
Confidence 34679999999999986 3899999999999999999654434567788999999999998653478999999999999
Q ss_pred EeecCCCCceEEeEEeecCCCceeEEEeccCC-----------CCeEEEEEeCCCcEEEEeecCCCC-eeeEEeeccCCC
Q 036510 83 IWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHE-----------LGLCLACGSSDGNISVFTARADGG-WDTSRIDQAHPV 150 (288)
Q Consensus 83 iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~-----------~~~~l~sg~~d~~i~i~d~~~~~~-~~~~~~~~~~~~ 150 (288)
+||++..... ....+.+|...|.+++|+|+. .+.++++|+.|++|++||++.+.. +.....+.+|..
T Consensus 127 ~wd~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~ 205 (297)
T 2pm7_B 127 VVEFKENGTT-SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD 205 (297)
T ss_dssp EEEBCSSSCB-CCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS
T ss_pred EEEecCCCce-eeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCC
Confidence 9999765322 124567899999999999973 145899999999999999986543 223345678999
Q ss_pred CeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCce--eeeeeeccccCCcceEEEEecCCCCCCCcEE
Q 036510 151 GVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIW--KMDCFPALQMHTDWVRDVAWAPNLGLPKSTI 228 (288)
Q Consensus 151 ~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l 228 (288)
.|.+++|+|++.. +.+|++++.|++|+|||+..... ....+ ....|...|.+++|+|++ .+|
T Consensus 206 ~V~~v~~sp~~~~-----------~~~las~s~D~~v~iWd~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~g----~~l 269 (297)
T 2pm7_B 206 WVRDVAWSPTVLL-----------RSYMASVSQDRTCIIWTQDNEQGPWKKTLL-KEEKFPDVLWRASWSLSG----NVL 269 (297)
T ss_dssp CEEEEEECCCCSS-----------SEEEEEEETTSCEEEEEESSTTSCCEEEES-SSSCCSSCEEEEEECSSS----CCE
T ss_pred ceEEEEECCCCCC-----------ceEEEEEECCCcEEEEEeCCCCCccceeee-ecccCCCcEEEEEECCCC----CEE
Confidence 9999999998410 16799999999999999976421 11111 125688899999999984 689
Q ss_pred EEEeCCCcEEEEEeec
Q 036510 229 ASASEDGKVIIWTVAR 244 (288)
Q Consensus 229 ~s~s~D~~i~iw~~~~ 244 (288)
|+++.|++|++|+...
T Consensus 270 as~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 270 ALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEETTSCEEEEEECT
T ss_pred EEEcCCCcEEEEEECC
Confidence 9999999999999764
No 81
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=5.8e-34 Score=251.70 Aligned_cols=250 Identities=16% Similarity=0.247 Sum_probs=196.4
Q ss_pred cccccccceEEEEEcC-CCCEEEEeeCCCcEEEEEeCCCCc-----eeeEEEeccccCeEEEEecCCCCCCEEEEeeCCC
Q 036510 6 IETGHEDTVHDVAMDY-YGKRLATASSDYSIKIIGVGNNTS-----QHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDG 79 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~-~g~~l~s~~~d~~i~lwd~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~ 79 (288)
.+.+|.+.|.+++|+| ++++|++|+.|++|++|++..... +.+..+.+|...|.+++|+++ ...+|++++.|+
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~-~~~~l~s~~~dg 154 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPT-AQNVLLSAGCDN 154 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSS-BTTEEEEEETTS
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcC-CCCEEEEEcCCC
Confidence 4668999999999999 899999999999999999864321 457888999999999999864 236999999999
Q ss_pred cEEEeecCCCCceEEeEEe--ecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCC-eeEEE
Q 036510 80 TVIIWKEGNSNEWIKDHVF--EDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVG-VTSVS 156 (288)
Q Consensus 80 ~v~iwd~~~~~~~~~~~~~--~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-v~~i~ 156 (288)
+|++||+.++. ....+ ..|...|.+++|+|+ +.++++++.|+.|++||++.+.. .......|... +.++.
T Consensus 155 ~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~ 227 (402)
T 2aq5_A 155 VILVWDVGTGA---AVLTLGPDVHPDTIYSVDWSRD--GALICTSCRDKRVRVIEPRKGTV--VAEKDRPHEGTRPVHAV 227 (402)
T ss_dssp CEEEEETTTTE---EEEEECTTTCCSCEEEEEECTT--SSCEEEEETTSEEEEEETTTTEE--EEEEECSSCSSSCCEEE
T ss_pred EEEEEECCCCC---ccEEEecCCCCCceEEEEECCC--CCEEEEEecCCcEEEEeCCCCce--eeeeccCCCCCcceEEE
Confidence 99999998754 34556 679999999999997 66789999999999999987532 12222567655 89999
Q ss_pred eCCCCCCCceecccccCCCceeEEe---ecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEE-EEEe
Q 036510 157 WAPSTAPGALVGSGFLDPVQKLCSG---GCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTI-ASAS 232 (288)
Q Consensus 157 ~~p~~~~~~~~~~~~~~~~~~l~s~---~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l-~s~s 232 (288)
|+|++ .+|++| +.|+.|++||+++....... ....|...|.++.|+|++ .+| ++|+
T Consensus 228 ~~~~~--------------~~l~~g~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~v~~~~~s~~~----~~l~~~g~ 287 (402)
T 2aq5_A 228 FVSEG--------------KILTTGFSRMSERQVALWDTKHLEEPLSL--QELDTSSGVLLPFFDPDT----NIVYLCGK 287 (402)
T ss_dssp ECSTT--------------EEEEEEECTTCCEEEEEEETTBCSSCSEE--EECCCCSSCEEEEEETTT----TEEEEEET
T ss_pred EcCCC--------------cEEEEeccCCCCceEEEEcCccccCCceE--EeccCCCceeEEEEcCCC----CEEEEEEc
Confidence 99986 678888 78999999999765321111 112466779999999984 456 4666
Q ss_pred CCCcEEEEEeecCCCcccceEee--ccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 233 EDGKVIIWTVAREGDQWEGKVLH--DFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 233 ~D~~i~iw~~~~~~~~~~~~~~~--~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
.|+.|++|++...... ...+. .+..+|.+++|+|++.++++ .++.+++|++
T Consensus 288 ~dg~i~i~d~~~~~~~--~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l 340 (402)
T 2aq5_A 288 GDSSIRYFEITSEAPF--LHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKL 340 (402)
T ss_dssp TCSCEEEEEECSSTTC--EEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEE
T ss_pred CCCeEEEEEecCCCcc--eEeecccccCCcccceEEeccccccee--cceeEEEEEc
Confidence 8999999999864321 12233 34588999999999999864 5679999984
No 82
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=7.3e-34 Score=247.50 Aligned_cols=205 Identities=25% Similarity=0.374 Sum_probs=174.8
Q ss_pred ccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeec
Q 036510 7 ETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE 86 (288)
Q Consensus 7 ~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~ 86 (288)
+.+|...|.+++|+|++++|++++.|++|++||+.. ++.+..+.+|...|.+++|++..++.+|++|+.|++|++||+
T Consensus 150 ~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~--~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~ 227 (354)
T 2pbi_B 150 VAMHTNYLSACSFTNSDMQILTASGDGTCALWDVES--GQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDM 227 (354)
T ss_dssp EEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTT--CCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEET
T ss_pred eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCC--CeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEEC
Confidence 457999999999999999999999999999999854 467889999999999999987556789999999999999999
Q ss_pred CCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCce
Q 036510 87 GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL 166 (288)
Q Consensus 87 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~ 166 (288)
+++. ....+..|...|++++|+|+ +.++++|+.|++|++||++........ ....+...+.++.|+|++
T Consensus 228 ~~~~---~~~~~~~h~~~v~~v~~~p~--~~~l~s~s~D~~v~lwd~~~~~~~~~~-~~~~~~~~~~~~~~s~~g----- 296 (354)
T 2pbi_B 228 RSGQ---CVQAFETHESDVNSVRYYPS--GDAFASGSDDATCRLYDLRADREVAIY-SKESIIFGASSVDFSLSG----- 296 (354)
T ss_dssp TTCC---EEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTEEEEEE-CCTTCCSCEEEEEECTTS-----
T ss_pred CCCc---EEEEecCCCCCeEEEEEeCC--CCEEEEEeCCCeEEEEECCCCcEEEEE-cCCCcccceeEEEEeCCC-----
Confidence 8765 45567889999999999998 578999999999999999865322111 112334578899999987
Q ss_pred ecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEE
Q 036510 167 VGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT 241 (288)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~ 241 (288)
.+|++|+.|++|++||+.++ +.+..+.+|...|.+++|+|++ .+|++|+.|++|++|+
T Consensus 297 ---------~~l~~g~~d~~i~vwd~~~~----~~~~~l~~h~~~v~~l~~spdg----~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 297 ---------RLLFAGYNDYTINVWDVLKG----SRVSILFGHENRVSTLRVSPDG----TAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ---------SEEEEEETTSCEEEEETTTC----SEEEEECCCSSCEEEEEECTTS----SCEEEEETTSEEEEEC
T ss_pred ---------CEEEEEECCCcEEEEECCCC----ceEEEEECCCCcEEEEEECCCC----CEEEEEcCCCCEEecC
Confidence 78999999999999999776 3455678999999999999984 6899999999999995
No 83
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-33 Score=236.96 Aligned_cols=239 Identities=20% Similarity=0.267 Sum_probs=196.9
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCC-CceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEe
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNN-TSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW 84 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iw 84 (288)
...+|...|.+++|+|++++|++++.|+.+++|++... ..+.+..+.+|...|.+++|. +.+|++++.|+.|++|
T Consensus 54 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~d~~i~~~ 129 (313)
T 3odt_A 54 VVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ----DGVVISGSWDKTAKVW 129 (313)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE----TTEEEEEETTSEEEEE
T ss_pred EeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec----CCEEEEEeCCCCEEEE
Confidence 34578999999999999999999999999999998543 335577889999999999993 6799999999999999
Q ss_pred ecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeecc-CCCCeeEEEeCCCCCC
Q 036510 85 KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQA-HPVGVTSVSWAPSTAP 163 (288)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~v~~i~~~p~~~~ 163 (288)
|. .. ....+..|...+.++.|+|.. +.++++++.|+.|++||... ....... |...+.++.|+|++
T Consensus 130 d~--~~---~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~-----~~~~~~~~~~~~i~~~~~~~~~-- 196 (313)
T 3odt_A 130 KE--GS---LVYNLQAHNASVWDAKVVSFS-ENKFLTASADKTIKLWQNDK-----VIKTFSGIHNDVVRHLAVVDDG-- 196 (313)
T ss_dssp ET--TE---EEEEEECCSSCEEEEEEEETT-TTEEEEEETTSCEEEEETTE-----EEEEECSSCSSCEEEEEEEETT--
T ss_pred cC--Cc---EEEecccCCCceeEEEEccCC-CCEEEEEECCCCEEEEecCc-----eEEEEeccCcccEEEEEEcCCC--
Confidence 92 22 445677899999999999842 56789999999999999432 2223333 88899999999986
Q ss_pred CceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEee
Q 036510 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243 (288)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~ 243 (288)
. +++++.|+.|++||++++ +.+..+.+|...|.+++|+|++ +|++++.|+.|++||+.
T Consensus 197 ------------~-~~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~i~~~~~~~~~-----~l~~~~~dg~v~iwd~~ 254 (313)
T 3odt_A 197 ------------H-FISCSNDGLIKLVDMHTG----DVLRTYEGHESFVYCIKLLPNG-----DIVSCGEDRTVRIWSKE 254 (313)
T ss_dssp ------------E-EEEEETTSEEEEEETTTC----CEEEEEECCSSCEEEEEECTTS-----CEEEEETTSEEEEECTT
T ss_pred ------------e-EEEccCCCeEEEEECCch----hhhhhhhcCCceEEEEEEecCC-----CEEEEecCCEEEEEECC
Confidence 4 889999999999999876 3556678899999999999973 59999999999999987
Q ss_pred cCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 244 REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 244 ~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
... ....+..+..+|.+++|+|+|+ +++++.|+.|++||+
T Consensus 255 ~~~---~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~ 294 (313)
T 3odt_A 255 NGS---LKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQ 294 (313)
T ss_dssp TCC---EEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEES
T ss_pred CCc---eeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeC
Confidence 542 2234456677999999999999 567999999999995
No 84
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4e-34 Score=251.34 Aligned_cols=219 Identities=22% Similarity=0.348 Sum_probs=178.3
Q ss_pred ceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeC
Q 036510 45 SQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSS 124 (288)
Q Consensus 45 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~ 124 (288)
..+..++.+|.+.|++++|+++ +.+|+|||.|++|+|||..++. ....+..|...|.+++|+|+ +.++++|+.
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~--~~~l~s~s~D~~v~iWd~~~~~---~~~~~~~h~~~v~~~~~s~~--g~~las~~~ 128 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPE--KNWIVSASQDGRLIVWNALTSQ---KTHAIKLHCPWVMECAFAPN--GQSVACGGL 128 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTT--SSCEEEEETTSEEEEEETTTTE---EEEEEECCCTTCCCCEECTT--SSEEEECCS
T ss_pred eEEeecccccccEEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCc---cceEEecCCCCEEEEEECCC--CCEEEEeeC
Confidence 4667889999999999999874 8999999999999999987654 45677889999999999998 678999999
Q ss_pred CCcEEEEeecCCC----CeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeee
Q 036510 125 DGNISVFTARADG----GWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMD 200 (288)
Q Consensus 125 d~~i~i~d~~~~~----~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 200 (288)
|+.+++|++.... .........+|...+.++.|.|+.. ..|++|+.|++|++||+.++.....
T Consensus 129 d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~-------------~~l~s~s~D~~i~~wd~~~~~~~~~ 195 (380)
T 3iz6_a 129 DSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQE-------------TRLITGSGDQTCVLWDVTTGQRISI 195 (380)
T ss_dssp SSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSS-------------SCEEEECTTSCEEEECTTTCCEEEE
T ss_pred CCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCC-------------CEEEEECCCCcEEEEEcCCCcEEEE
Confidence 9999999986421 1112234568988999999998752 5799999999999999988642211
Q ss_pred ee-eccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCC
Q 036510 201 CF-PALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGN 279 (288)
Q Consensus 201 ~~-~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d 279 (288)
.. ....+|...|.++.|+|.. +.+|++|+.|++|++||++.... ....+.+|...|.+++|+|+|++|++|+.|
T Consensus 196 ~~~~~~~~h~~~v~~~~~~~~~---~~~l~sgs~D~~v~~wd~~~~~~--~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D 270 (380)
T 3iz6_a 196 FGSEFPSGHTADVLSLSINSLN---ANMFISGSCDTTVRLWDLRITSR--AVRTYHGHEGDINSVKFFPDGQRFGTGSDD 270 (380)
T ss_dssp ECCCSSSSCCSCEEEEEECSSS---CCEEEEEETTSCEEEEETTTTCC--CCEEECCCSSCCCEEEECTTSSEEEEECSS
T ss_pred eecccCCCCccCeEEEEeecCC---CCEEEEEECCCeEEEEECCCCCc--ceEEECCcCCCeEEEEEecCCCeEEEEcCC
Confidence 10 1126799999999998842 47899999999999999874322 234567788999999999999999999999
Q ss_pred CcEEEeEcC
Q 036510 280 NNVTLWEEA 288 (288)
Q Consensus 280 ~~v~~w~~~ 288 (288)
++|+|||++
T Consensus 271 ~~i~lwd~~ 279 (380)
T 3iz6_a 271 GTCRLFDMR 279 (380)
T ss_dssp SCEEEEETT
T ss_pred CeEEEEECC
Confidence 999999963
No 85
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.2e-32 Score=244.21 Aligned_cols=233 Identities=18% Similarity=0.291 Sum_probs=197.3
Q ss_pred ccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCC
Q 036510 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGN 88 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~ 88 (288)
+|...|.++++ ++++|++|+.|++|++||... ++.+..+.+|...|.+++|. +++|++|+.||+|++||+.+
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~--~~~~~~~~~h~~~v~~l~~~----~~~l~sg~~dg~i~vwd~~~ 202 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNT--LECKRILTGHTGSVLCLQYD----ERVIITGSSDSTVRVWDVNT 202 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSS--CCEEEEECCCSSCEEEEECC----SSEEEEEETTSCEEEEESSS
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCC--CeEEEEEcCCCCcEEEEEEC----CCEEEEEcCCCeEEEEECCC
Confidence 56778887766 799999999999999999853 46788899999999999982 78999999999999999987
Q ss_pred CCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceec
Q 036510 89 SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG 168 (288)
Q Consensus 89 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~ 168 (288)
+. ....+..|...|.+++|+++ ++++|+.|+.|++||++.+..........+|...|.++.|. +
T Consensus 203 ~~---~~~~~~~h~~~v~~l~~~~~----~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~------- 266 (435)
T 1p22_A 203 GE---MLNTLIHHCEAVLHLRFNNG----MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--D------- 266 (435)
T ss_dssp CC---EEEEECCCCSCEEEEECCTT----EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--T-------
T ss_pred Cc---EEEEEcCCCCcEEEEEEcCC----EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC--C-------
Confidence 65 45667789999999999753 68999999999999998765544445667899999999983 2
Q ss_pred ccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCc
Q 036510 169 SGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQ 248 (288)
Q Consensus 169 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~ 248 (288)
+++++|+.|+.|++||++++ +++..+.+|...|.++.|++ .+|++|+.|++|++||++...
T Consensus 267 -------~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~~~v~~~~~~~------~~l~~g~~dg~i~iwd~~~~~-- 327 (435)
T 1p22_A 267 -------KYIVSASGDRTIKVWNTSTC----EFVRTLNGHKRGIACLQYRD------RLVVSGSSDNTIRLWDIECGA-- 327 (435)
T ss_dssp -------TEEEEEETTSEEEEEETTTC----CEEEEEECCSSCEEEEEEET------TEEEEEETTSCEEEEETTTCC--
T ss_pred -------CEEEEEeCCCeEEEEECCcC----cEEEEEcCCCCcEEEEEeCC------CEEEEEeCCCeEEEEECCCCC--
Confidence 67999999999999999876 45667788999999999964 489999999999999987532
Q ss_pred ccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 249 WEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 249 ~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
....+..|...|.+++| ++++|++|+.||+|++||+
T Consensus 328 -~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 328 -CLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 363 (435)
T ss_dssp -EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEH
T ss_pred -EEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEEC
Confidence 22445667889999999 8999999999999999995
No 86
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=5e-33 Score=248.37 Aligned_cols=239 Identities=23% Similarity=0.442 Sum_probs=198.9
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
.+.+|...|.+++| ++++|++|+.|++|++||+.. ++.+..+.+|...|.+++|+ +.+|++++.|++|++||
T Consensus 168 ~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~l~~~----~~~l~s~s~dg~i~vwd 239 (435)
T 1p22_A 168 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT--GEMLNTLIHHCEAVLHLRFN----NGMMVTCSKDRSIAVWD 239 (435)
T ss_dssp EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS--CCEEEEECCCCSCEEEEECC----TTEEEEEETTSCEEEEE
T ss_pred EEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC--CcEEEEEcCCCCcEEEEEEc----CCEEEEeeCCCcEEEEe
Confidence 45689999999988 689999999999999999864 36788899999999999995 46999999999999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCc
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGA 165 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~ 165 (288)
+.+.........+.+|...|.+++|. +.++++|+.|+.|++||++++.. .....+|...|.++.|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~l~s~~~dg~i~vwd~~~~~~---~~~~~~~~~~v~~~~~~~------ 306 (435)
T 1p22_A 240 MASPTDITLRRVLVGHRAAVNVVDFD----DKYIVSASGDRTIKVWNTSTCEF---VRTLNGHKRGIACLQYRD------ 306 (435)
T ss_dssp CSSSSCCEEEEEECCCSSCEEEEEEE----TTEEEEEETTSEEEEEETTTCCE---EEEEECCSSCEEEEEEET------
T ss_pred CCCCCCceeeeEecCCCCcEEEEEeC----CCEEEEEeCCCeEEEEECCcCcE---EEEEcCCCCcEEEEEeCC------
Confidence 98766544445677899999999993 45789999999999999987542 344567888999998853
Q ss_pred eecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecC
Q 036510 166 LVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245 (288)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~ 245 (288)
.++++|+.|+.|++||++++ +++..+.+|...|.++.|.+ .+|++|+.|+.|++||+...
T Consensus 307 ----------~~l~~g~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~~~------~~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 307 ----------RLVVSGSSDNTIRLWDIECG----ACLRVLEGHEELVRCIRFDN------KRIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp ----------TEEEEEETTSCEEEEETTTC----CEEEEECCCSSCEEEEECCS------SEEEEEETTSCEEEEEHHHH
T ss_pred ----------CEEEEEeCCCeEEEEECCCC----CEEEEEeCCcCcEEEEEecC------CEEEEEeCCCcEEEEECCCC
Confidence 57999999999999999876 45667789999999999943 58999999999999998754
Q ss_pred CCcc------cceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 246 GDQW------EGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 246 ~~~~------~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
.... ....+..|.++|.+++| ++++|++|+.||+|++||+
T Consensus 367 ~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~ 412 (435)
T 1p22_A 367 LDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDF 412 (435)
T ss_dssp TSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-
T ss_pred CCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEEC
Confidence 3110 22345677889999999 8999999999999999995
No 87
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=7.6e-34 Score=253.84 Aligned_cols=214 Identities=18% Similarity=0.199 Sum_probs=171.4
Q ss_pred eEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCc
Q 036510 48 LAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN 127 (288)
Q Consensus 48 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~ 127 (288)
.....+|...|++|+|+|. ++.+||+|+.||+|+|||+..+... ....+.+|.+.|++|+|+|.+ +.+|++|+.|++
T Consensus 112 ~~~~~~~~~~V~~l~~~P~-~~~~lasGs~dg~i~lWd~~~~~~~-~~~~~~gH~~~V~~l~f~p~~-~~~l~s~s~D~~ 188 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPT-HPSTVAVGSKGGDIMLWNFGIKDKP-TFIKGIGAGGSITGLKFNPLN-TNQFYASSMEGT 188 (435)
T ss_dssp CCEEEECSSCEEEEEECSS-CTTCEEEEETTSCEEEECSSCCSCC-EEECCCSSSCCCCEEEECSSC-TTEEEEECSSSC
T ss_pred cccCCCCCCCEEEEEEeCC-CCCEEEEEeCCCEEEEEECCCCCce-eEEEccCCCCCEEEEEEeCCC-CCEEEEEeCCCE
Confidence 4556789999999999753 5789999999999999998765432 333456899999999999954 567999999999
Q ss_pred EEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeecccc
Q 036510 128 ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQM 207 (288)
Q Consensus 128 i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 207 (288)
|++||++.. ..........+...+.++.|+|++ .+|++|+.|+.|++||++.. .+..+.+
T Consensus 189 v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------------~~l~~g~~dg~i~~wd~~~~-----~~~~~~~ 248 (435)
T 4e54_B 189 TRLQDFKGN-ILRVFASSDTINIWFCSLDVSASS--------------RMVVTGDNVGNVILLNMDGK-----ELWNLRM 248 (435)
T ss_dssp EEEEETTSC-EEEEEECCSSCSCCCCCEEEETTT--------------TEEEEECSSSBEEEEESSSC-----BCCCSBC
T ss_pred EEEeeccCC-ceeEEeccCCCCccEEEEEECCCC--------------CEEEEEeCCCcEeeeccCcc-----eeEEEec
Confidence 999999753 222222223345568889999987 78999999999999998653 4567889
Q ss_pred CCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 208 HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 208 h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
|...|.+++|+|+. ..+|++|+.|++|++||++............+|..+|++++|+|||++|++++.|++|+|||.
T Consensus 249 h~~~v~~v~~~p~~---~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~ 325 (435)
T 4e54_B 249 HKKKVTHVALNPCC---DWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSA 325 (435)
T ss_dssp CSSCEEEEEECTTC---SSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEES
T ss_pred ccceEEeeeecCCC---ceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEEC
Confidence 99999999999985 458999999999999998764322222223467789999999999999999999999999995
No 88
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=7.1e-33 Score=276.10 Aligned_cols=267 Identities=19% Similarity=0.267 Sum_probs=205.3
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
.+.+|.+.|.+++|+|+|++|++|+.|++|++||+.. ++.+..+.+|...|++++|+++.++.++++++.|++|++||
T Consensus 652 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd 729 (1249)
T 3sfz_A 652 DIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT--GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWD 729 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT--CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEE
T ss_pred EeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC--CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEE
Confidence 3458999999999999999999999999999999854 46788999999999999998765677999999999999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEe----------eccCCCCeeEE
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRI----------DQAHPVGVTSV 155 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~----------~~~~~~~v~~i 155 (288)
+.++. ....+.+|...|++++|+|+ +.++++|+.||.|++||++.+........ ...+...+.++
T Consensus 730 ~~~~~---~~~~~~~h~~~v~~~~~sp~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 804 (1249)
T 3sfz_A 730 LNQKE---CRNTMFGHTNSVNHCRFSPD--DELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCC 804 (1249)
T ss_dssp TTSSS---EEEEECCCSSCEEEEEECSS--TTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCC
T ss_pred CCCcc---hhheecCCCCCEEEEEEecC--CCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEE
Confidence 98765 45567789999999999998 66899999999999999876432111110 00112234555
Q ss_pred EeCCCCCC----------------------------CceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeecccc
Q 036510 156 SWAPSTAP----------------------------GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQM 207 (288)
Q Consensus 156 ~~~p~~~~----------------------------~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 207 (288)
.|+|++.. +.+....+..++.++++++.|+.|++||+.++ ..+..+.+
T Consensus 805 ~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~----~~~~~~~~ 880 (1249)
T 3sfz_A 805 SWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR----LKVADCRG 880 (1249)
T ss_dssp CBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTT----EEEEEECC
T ss_pred EECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC----ceeeecCC
Confidence 55555421 00111223334578999999999999999876 34566789
Q ss_pred CCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCC----------------------------------------
Q 036510 208 HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGD---------------------------------------- 247 (288)
Q Consensus 208 h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~---------------------------------------- 247 (288)
|...|.++.|+|++ .+|++++.|++|++|++.....
T Consensus 881 h~~~v~~v~~spdg----~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 956 (1249)
T 3sfz_A 881 HLSWVHGVMFSPDG----SSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQI 956 (1249)
T ss_dssp CSSCEEEEEECTTS----SEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCE
T ss_pred CccceEEEEECCCC----CEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceE
Confidence 99999999999974 6899999999999999642100
Q ss_pred ------------------------------------cccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 248 ------------------------------------QWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 248 ------------------------------------~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
.........|...|.+++|+|+|++|++++.|++|++||.
T Consensus 957 ~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~ 1032 (1249)
T 3sfz_A 957 DYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNW 1032 (1249)
T ss_dssp EEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEET
T ss_pred EEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 0000112345678899999999999999999999999985
No 89
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-32 Score=242.45 Aligned_cols=241 Identities=22% Similarity=0.345 Sum_probs=192.1
Q ss_pred ccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEec-cccCeEEEEecCCCCCCEEEEeeCCCcEEEeecC
Q 036510 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSG-HKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEG 87 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~ 87 (288)
+|.+.++..++++++..+++++.|++|++|++..+ +....+.. |...|.+++|+++ +.+|++++.||.|++||+.
T Consensus 89 ~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~--~~~~~~~~~~~~~v~~v~~s~~--~~~l~~~~~dg~i~iwd~~ 164 (401)
T 4aez_A 89 GIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSG--SVSALAETDESTYVASVKWSHD--GSFLSVGLGNGLVDIYDVE 164 (401)
T ss_dssp TCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTC--CEEEEEECCTTCCEEEEEECTT--SSEEEEEETTSCEEEEETT
T ss_pred CCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCC--cEeEeeecCCCCCEEEEEECCC--CCEEEEECCCCeEEEEECc
Confidence 56555444334444567889999999999998654 34444444 8899999999864 8999999999999999997
Q ss_pred CCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCcee
Q 036510 88 NSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV 167 (288)
Q Consensus 88 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~ 167 (288)
++. ....+..|...|.+++|++ .++++|+.|+.|++||++.... ......+|...|.++.|+|++
T Consensus 165 ~~~---~~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~------ 229 (401)
T 4aez_A 165 SQT---KLRTMAGHQARVGCLSWNR----HVLSSGSRSGAIHHHDVRIANH--QIGTLQGHSSEVCGLAWRSDG------ 229 (401)
T ss_dssp TCC---EEEEECCCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSSC--EEEEEECCSSCEEEEEECTTS------
T ss_pred CCe---EEEEecCCCCceEEEEECC----CEEEEEcCCCCEEEEecccCcc--eeeEEcCCCCCeeEEEEcCCC------
Confidence 665 4556778999999999964 4789999999999999985433 234556899999999999986
Q ss_pred cccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEe--CCCcEEEEEeecC
Q 036510 168 GSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASAS--EDGKVIIWTVARE 245 (288)
Q Consensus 168 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s--~D~~i~iw~~~~~ 245 (288)
.+|++++.|+.|++||++++ +....+..|...|.+++|+|+. ..++++++ .|+.|++||+...
T Consensus 230 --------~~l~s~~~d~~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~p~~---~~ll~~~~gs~d~~i~i~d~~~~ 294 (401)
T 4aez_A 230 --------LQLASGGNDNVVQIWDARSS----IPKFTKTNHNAAVKAVAWCPWQ---SNLLATGGGTMDKQIHFWNAATG 294 (401)
T ss_dssp --------SEEEEEETTSCEEEEETTCS----SEEEEECCCSSCCCEEEECTTS---TTEEEEECCTTTCEEEEEETTTC
T ss_pred --------CEEEEEeCCCeEEEccCCCC----CccEEecCCcceEEEEEECCCC---CCEEEEecCCCCCEEEEEECCCC
Confidence 78999999999999999875 3445667899999999999975 45788876 7999999998753
Q ss_pred CCcccceEeeccccCeEEEEeecCCCEEEEEe--CCCcEEEeEc
Q 036510 246 GDQWEGKVLHDFKTPVYRVSWSLTGNILAVAD--GNNNVTLWEE 287 (288)
Q Consensus 246 ~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~--~d~~v~~w~~ 287 (288)
.. ... ..+...|.+++|+|+|++|++++ .|+.|+||++
T Consensus 295 ~~---~~~-~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~ 334 (401)
T 4aez_A 295 AR---VNT-VDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSY 334 (401)
T ss_dssp CE---EEE-EECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEE
T ss_pred CE---EEE-EeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEec
Confidence 21 122 23567899999999999999954 8999999995
No 90
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-33 Score=250.58 Aligned_cols=252 Identities=13% Similarity=0.142 Sum_probs=188.3
Q ss_pred ccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCC-CceeeEEEec------------cccCeEEEEecCCCCCCEEEEe
Q 036510 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNN-TSQHLAKLSG------------HKGAVWEVAWAHPKFGSILASC 75 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~-~~~~~~~~~~------------h~~~v~~~~~~~~~~~~~l~s~ 75 (288)
+|...|.+++|+|++++|++|+.|++|++||+... .++.+..+.+ +...+.++.+...+++.+|+++
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 79999999999999999999999999999998411 1122332222 3455566663322358899999
Q ss_pred eCCCcEEEeecCCCCceEEeEEeec--CCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEee-ccCCCCe
Q 036510 76 SFDGTVIIWKEGNSNEWIKDHVFED--HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRID-QAHPVGV 152 (288)
Q Consensus 76 s~d~~v~iwd~~~~~~~~~~~~~~~--h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~v 152 (288)
+.|++|++||+++.. ....+.. |...|++++|+|+ +.++++|+.|+.|++||++.+.. .... ..|...|
T Consensus 189 ~~d~~i~iwd~~~~~---~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~~v 260 (437)
T 3gre_A 189 TNLSRVIIFDIRTLE---RLQIIENSPRHGAVSSICIDEE--CCVLILGTTRGIIDIWDIRFNVL---IRSWSFGDHAPI 260 (437)
T ss_dssp ETTSEEEEEETTTCC---EEEEEECCGGGCCEEEEEECTT--SCEEEEEETTSCEEEEETTTTEE---EEEEBCTTCEEE
T ss_pred eCCCeEEEEeCCCCe---eeEEEccCCCCCceEEEEECCC--CCEEEEEcCCCeEEEEEcCCccE---EEEEecCCCCce
Confidence 999999999998765 3455665 8899999999998 67899999999999999987432 2222 2677789
Q ss_pred eEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeee--------------------cccc--CCc
Q 036510 153 TSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFP--------------------ALQM--HTD 210 (288)
Q Consensus 153 ~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--------------------~~~~--h~~ 210 (288)
.++.|+|.. ..++.+|++|+.|++|++||++++........ .+.+ |..
T Consensus 261 ~~~~~~~~~----------s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 330 (437)
T 3gre_A 261 THVEVCQFY----------GKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLN 330 (437)
T ss_dssp EEEEECTTT----------CTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGG
T ss_pred EEEEecccc----------CCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCC
Confidence 999888752 12236899999999999999987632111100 1122 777
Q ss_pred ceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEee-----------------------------------
Q 036510 211 WVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLH----------------------------------- 255 (288)
Q Consensus 211 ~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~----------------------------------- 255 (288)
.|.+++|++ +.+|++|+.|+.|++||+...... ..+.
T Consensus 331 ~v~~l~~~~-----~~~l~s~~~d~~i~~wd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (437)
T 3gre_A 331 ALSTISVSN-----DKILLTDEATSSIVMFSLNELSSS---KAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDD 402 (437)
T ss_dssp GGCCEEEET-----TEEEEEEGGGTEEEEEETTCGGGC---EEEECC--CCCEEEEEEEETTEEEEEEECC---------
T ss_pred ceEEEEECC-----ceEEEecCCCCeEEEEECCCcccc---eEEecccccCceEEEEEeecceEEEEEecccccccccCc
Confidence 788899984 368999999999999998754211 1111
Q ss_pred --ccccCeEEEEeecC--CCEEEEEeCCCcEEEeE
Q 036510 256 --DFKTPVYRVSWSLT--GNILAVADGNNNVTLWE 286 (288)
Q Consensus 256 --~~~~~i~~~~~spd--g~~l~s~~~d~~v~~w~ 286 (288)
.|...|++++|+++ +.+|++|+.||.|+||+
T Consensus 403 ~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 403 SLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ----CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 16788999999998 78999999999999995
No 91
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.4e-32 Score=242.83 Aligned_cols=244 Identities=18% Similarity=0.293 Sum_probs=191.0
Q ss_pred EEEEcCCCCE-EEEeeCCCcEEEEEeCCCCc--eeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCce
Q 036510 16 DVAMDYYGKR-LATASSDYSIKIIGVGNNTS--QHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEW 92 (288)
Q Consensus 16 ~~~~s~~g~~-l~s~~~d~~i~lwd~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~ 92 (288)
.++++|+... +++++.|+.|++|++..... ..+..+.+|...|++++|++. ++.+|++++.|++|++|++..+...
T Consensus 39 ~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~-~~~~l~s~s~dg~v~vw~~~~~~~~ 117 (402)
T 2aq5_A 39 FCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPH-NDNVIASGSEDCTVMVWEIPDGGLV 117 (402)
T ss_dssp SEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTT-CTTEEEEEETTSEEEEEECCTTCCS
T ss_pred cEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCC-CCCEEEEEeCCCeEEEEEccCCCCc
Confidence 4678887644 45688999999999853211 235567899999999999862 4789999999999999999765210
Q ss_pred ----EEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEee--ccCCCCeeEEEeCCCCCCCce
Q 036510 93 ----IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRID--QAHPVGVTSVSWAPSTAPGAL 166 (288)
Q Consensus 93 ----~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~--~~~~~~v~~i~~~p~~~~~~~ 166 (288)
.....+.+|...|.+++|+|++ ..++++|+.|+.|++||++.+. ..... ..|...|.++.|+|++
T Consensus 118 ~~~~~~~~~~~~h~~~v~~~~~~p~~-~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~----- 188 (402)
T 2aq5_A 118 LPLREPVITLEGHTKRVGIVAWHPTA-QNVLLSAGCDNVILVWDVGTGA---AVLTLGPDVHPDTIYSVDWSRDG----- 188 (402)
T ss_dssp SCBCSCSEEEECCSSCEEEEEECSSB-TTEEEEEETTSCEEEEETTTTE---EEEEECTTTCCSCEEEEEECTTS-----
T ss_pred cccCCceEEecCCCCeEEEEEECcCC-CCEEEEEcCCCEEEEEECCCCC---ccEEEecCCCCCceEEEEECCCC-----
Confidence 1345677899999999999984 3579999999999999998653 22334 6799999999999987
Q ss_pred ecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeecc-ccCCcc-eEEEEecCCCCCCCcEEEEE---eCCCcEEEEE
Q 036510 167 VGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPAL-QMHTDW-VRDVAWAPNLGLPKSTIASA---SEDGKVIIWT 241 (288)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~h~~~-V~~v~~sp~~~~~~~~l~s~---s~D~~i~iw~ 241 (288)
++|++++.|+.|++||++++ +.+..+ .+|... +.++.|+|+ +.+|++| +.|+.|++||
T Consensus 189 ---------~~l~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~g~~~~~d~~i~iwd 251 (402)
T 2aq5_A 189 ---------ALICTSCRDKRVRVIEPRKG----TVVAEKDRPHEGTRPVHAVFVSE----GKILTTGFSRMSERQVALWD 251 (402)
T ss_dssp ---------SCEEEEETTSEEEEEETTTT----EEEEEEECSSCSSSCCEEEECST----TEEEEEEECTTCCEEEEEEE
T ss_pred ---------CEEEEEecCCcEEEEeCCCC----ceeeeeccCCCCCcceEEEEcCC----CcEEEEeccCCCCceEEEEc
Confidence 78999999999999999876 344455 577765 899999997 4688888 7999999999
Q ss_pred eecCCCcccceEeeccccCeEEEEeecCCCEEEE-EeCCCcEEEeEc
Q 036510 242 VAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAV-ADGNNNVTLWEE 287 (288)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s-~~~d~~v~~w~~ 287 (288)
++....+. ......+...+.+++|+|+|++|++ |+.|++|++||+
T Consensus 252 ~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~ 297 (402)
T 2aq5_A 252 TKHLEEPL-SLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEI 297 (402)
T ss_dssp TTBCSSCS-EEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEE
T ss_pred CccccCCc-eEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEe
Confidence 87643211 1222245678999999999999875 557999999995
No 92
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.4e-32 Score=250.85 Aligned_cols=248 Identities=16% Similarity=0.229 Sum_probs=202.6
Q ss_pred cccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCC--CceeeEEEeccccC-eEEEEecCCCCCCEEEEeeCCCcEEEe
Q 036510 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNN--TSQHLAKLSGHKGA-VWEVAWAHPKFGSILASCSFDGTVIIW 84 (288)
Q Consensus 8 ~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~--~~~~~~~~~~h~~~-v~~~~~~~~~~~~~l~s~s~d~~v~iw 84 (288)
..|.+.|.+++|+|+|++|++++ ++.|++|++..+ ..+....+.+|... |++++|++..++++|++++.|++|++|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 37899999999999999999998 889999998632 01567889999999 999999861138999999999999999
Q ss_pred ecCCCC-----ceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC----CcEEEEeecCCCCeeeEEeeccCCCCeeEE
Q 036510 85 KEGNSN-----EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD----GNISVFTARADGGWDTSRIDQAHPVGVTSV 155 (288)
Q Consensus 85 d~~~~~-----~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 155 (288)
|+.++. .......+..|..+|.+++|+|+ +.++++++.+ +.|++||.. . ......+|...|.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~~~~~~~~v~~~d~~--~---~~~~~~~~~~~v~~~ 166 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFE--GRRLCVVGEGRDNFGVFISWDSG--N---SLGEVSGHSQRINAC 166 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTT--SSEEEEEECCSSCSEEEEETTTC--C---EEEECCSCSSCEEEE
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeCC--CCEEEEeccCCCCccEEEEEECC--C---cceeeecCCccEEEE
Confidence 986431 12345567789999999999998 5678888877 688888732 1 234556899999999
Q ss_pred EeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCc---ceEEEEecCCCCCCCcEEEEEe
Q 036510 156 SWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTD---WVRDVAWAPNLGLPKSTIASAS 232 (288)
Q Consensus 156 ~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~---~V~~v~~sp~~~~~~~~l~s~s 232 (288)
.|+|++. .++++++.|+.|++||+.++ +++..+.+|.. .|.+++|+|+. +.+|++++
T Consensus 167 ~~~~~~~-------------~~l~~~~~d~~v~vwd~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~ 226 (615)
T 1pgu_A 167 HLKQSRP-------------MRSMTVGDDGSVVFYQGPPF----KFSASDRTHHKQGSFVRDVEFSPDS---GEFVITVG 226 (615)
T ss_dssp EECSSSS-------------CEEEEEETTTEEEEEETTTB----EEEEEECSSSCTTCCEEEEEECSTT---CCEEEEEE
T ss_pred EECCCCC-------------cEEEEEeCCCcEEEEeCCCc----ceeeeecccCCCCceEEEEEECCCC---CCEEEEEe
Confidence 9999872 37999999999999998765 45567788998 99999999972 36899999
Q ss_pred CCCcEEEEEeecCCCcccceEe-e---ccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 233 EDGKVIIWTVAREGDQWEGKVL-H---DFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 233 ~D~~i~iw~~~~~~~~~~~~~~-~---~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
.|+.|++||+...+ ....+ . .|..+|.+++|+ ++++|++++.|++|++||.
T Consensus 227 ~dg~i~vwd~~~~~---~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~ 281 (615)
T 1pgu_A 227 SDRKISCFDGKSGE---FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDV 281 (615)
T ss_dssp TTCCEEEEETTTCC---EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEET
T ss_pred CCCeEEEEECCCCC---EeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEEC
Confidence 99999999987542 12233 3 677899999999 9999999999999999995
No 93
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=9.5e-33 Score=246.18 Aligned_cols=248 Identities=16% Similarity=0.227 Sum_probs=183.6
Q ss_pred cceEEEEEcCCC--CEEEEeeCCCcEEEEEeCCCCc-------------------------------------eeeEE-E
Q 036510 12 DTVHDVAMDYYG--KRLATASSDYSIKIIGVGNNTS-------------------------------------QHLAK-L 51 (288)
Q Consensus 12 ~~v~~~~~s~~g--~~l~s~~~d~~i~lwd~~~~~~-------------------------------------~~~~~-~ 51 (288)
+.|.+++|+|++ .+|++++.|++|++|++..... ..... +
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 889999999998 7999999999999999853111 00112 3
Q ss_pred eccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeE-----EeecCCCceeEEEeccCCCCeEEEEEeCCC
Q 036510 52 SGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDH-----VFEDHKSSVNSIDWAPHELGLCLACGSSDG 126 (288)
Q Consensus 52 ~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-----~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~ 126 (288)
.+|...|++++|+++ +++|++| .|++|++||+.......... .+..|...|++++|+|++ ..++++|+.|+
T Consensus 174 ~~h~~~v~~~~~~~~--~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~~l~s~~~dg 249 (447)
T 3dw8_B 174 NAHTYHINSISINSD--YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNS-CNTFVYSSSKG 249 (447)
T ss_dssp SCCSSCCCEEEECTT--SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSC-TTEEEEEETTS
T ss_pred cCCCcceEEEEEcCC--CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCC-CcEEEEEeCCC
Confidence 689999999999864 8899998 79999999997433211110 245799999999999983 26899999999
Q ss_pred cEEEEeecCCCCee-eEEeeccCCC------------CeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEe
Q 036510 127 NISVFTARADGGWD-TSRIDQAHPV------------GVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLY 193 (288)
Q Consensus 127 ~i~i~d~~~~~~~~-~~~~~~~~~~------------~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 193 (288)
.|++||++.+.... .......|.. .|.++.|+|++ ++|++++. +.|++||++
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g--------------~~l~~~~~-~~v~iwd~~ 314 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG--------------RYMMTRDY-LSVKVWDLN 314 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTS--------------SEEEEEES-SEEEEEETT
T ss_pred eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCC--------------CEEEEeeC-CeEEEEeCC
Confidence 99999998764311 1233445554 89999999987 78899888 999999997
Q ss_pred C-CceeeeeeeccccCCcc---------------eEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccc------
Q 036510 194 N-GIWKMDCFPALQMHTDW---------------VRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEG------ 251 (288)
Q Consensus 194 ~-~~~~~~~~~~~~~h~~~---------------V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~------ 251 (288)
. + +++..+.+|... +..++|+|++ .+|++|+.|+.|++||+.........
T Consensus 315 ~~~----~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~----~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~ 386 (447)
T 3dw8_B 315 MEN----RPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSD----SVVMTGSYNNFFRMFDRNTKRDITLEASRENN 386 (447)
T ss_dssp CCS----SCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTS----SEEEEECSTTEEEEEETTTCCEEEEECCSTTC
T ss_pred CCc----cccceeeccccccccccccccccccccceEEEECCCC----CEEEEeccCCEEEEEEcCCCcceeeeeccccc
Confidence 5 3 345556666532 2248999984 68999999999999998754210000
Q ss_pred ---------------------eE--eeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 252 ---------------------KV--LHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 252 ---------------------~~--~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
.. ..++...|..++|||+|++||+++.|+ +.+|..
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 387 KPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp CTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred ccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeecc
Confidence 00 013446789999999999999998765 777763
No 94
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-32 Score=238.32 Aligned_cols=235 Identities=10% Similarity=0.035 Sum_probs=171.9
Q ss_pred EcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCC------ce
Q 036510 19 MDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN------EW 92 (288)
Q Consensus 19 ~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~------~~ 92 (288)
+.+++++|++|+.|++|++||+..+ +.+..+. ...|..+.|.+ . +++++.|++|++|+..... +.
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~--~~~~~~~--~~~v~~~~~~~----~-~~s~s~D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDS--KTITTIT--TPNPRTGGEHP----A-IISRGPCNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSS--SCEEEEE--EECCCTTCCCC----S-EEEECSTTEEEEEETTTEEEEEETTTC
T ss_pred hcCCCCEEEEECCCCcEEEEECCCC--cEEEEEe--cCCceeeeeCC----c-eEEecCCCeEEEEEccCceEEeecCCc
Confidence 3457889999999999999999644 4455554 56677777753 2 9999999999999765210 11
Q ss_pred EEeEEe-ecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccc
Q 036510 93 IKDHVF-EDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGF 171 (288)
Q Consensus 93 ~~~~~~-~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~ 171 (288)
.....+ ..|..+|.+++|+|...+.++++|+.|++|++||++.+... ......|...+.++.|+|++
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~--~~~~~~~~~~i~~~~~~pdg---------- 182 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQY--IVHSAKSDVEYSSGVLHKDS---------- 182 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEE--EEECCCSSCCCCEEEECTTS----------
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEE--EEEecCCCCceEEEEECCCC----------
Confidence 111222 25778999999999222678999999999999999875431 12223456679999999987
Q ss_pred cCCCceeEEeecCCcEEEEEEeCCceeeeee-ecccc-CCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcc
Q 036510 172 LDPVQKLCSGGCDNTVKVWKLYNGIWKMDCF-PALQM-HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQW 249 (288)
Q Consensus 172 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~-h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~ 249 (288)
.+|++|+.|+.|++||++++. .. ..+.+ |..+|.+++|+|++ .+|+++++| +|++||++......
T Consensus 183 ----~~lasg~~dg~i~iwd~~~~~----~~~~~~~~~h~~~v~~l~fs~~g----~~l~s~~~~-~v~iwd~~~~~~~~ 249 (343)
T 3lrv_A 183 ----LLLALYSPDGILDVYNLSSPD----QASSRFPVDEEAKIKEVKFADNG----YWMVVECDQ-TVVCFDLRKDVGTL 249 (343)
T ss_dssp ----CEEEEECTTSCEEEEESSCTT----SCCEECCCCTTSCEEEEEECTTS----SEEEEEESS-BEEEEETTSSTTCB
T ss_pred ----CEEEEEcCCCEEEEEECCCCC----CCccEEeccCCCCEEEEEEeCCC----CEEEEEeCC-eEEEEEcCCCCcce
Confidence 789999999999999998863 22 45566 99999999999984 789999955 99999998653221
Q ss_pred cceEeeccccCe--EEEEeecCCCEEEEEeC-CCcEEEeEc
Q 036510 250 EGKVLHDFKTPV--YRVSWSLTGNILAVADG-NNNVTLWEE 287 (288)
Q Consensus 250 ~~~~~~~~~~~i--~~~~~spdg~~l~s~~~-d~~v~~w~~ 287 (288)
....+..+..++ .+++|+|+|++|++++. |+.|+||+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 250 AYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp SSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred eecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEE
Confidence 111111122233 46999999999999998 999999985
No 95
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-32 Score=262.37 Aligned_cols=161 Identities=12% Similarity=0.106 Sum_probs=123.0
Q ss_pred eEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCe--eeEEe-e-----ccCCCCeeEEEeCCCCCCCceecccccCCCce
Q 036510 106 NSIDWAPHELGLCLACGSSDGNISVFTARADGGW--DTSRI-D-----QAHPVGVTSVSWAPSTAPGALVGSGFLDPVQK 177 (288)
Q Consensus 106 ~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~--~~~~~-~-----~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~ 177 (288)
.+++|+|+ +.++++|+.|++|++||+..+... ..+.. . .+|...|.+++|+|++ ++
T Consensus 439 ~sv~~spd--g~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg--------------~~ 502 (902)
T 2oaj_A 439 RQKLPAEY--GTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAET--------------LE 502 (902)
T ss_dssp CCCCCCSE--EEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTT--------------TE
T ss_pred Cccccccc--CcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCC--------------Ce
Confidence 33444565 678999999999999999765311 01111 1 2788899999999998 78
Q ss_pred eEEeecCCcEEEEEEeCCce-----------------------------------------eeeeeeccccCCcceEEEE
Q 036510 178 LCSGGCDNTVKVWKLYNGIW-----------------------------------------KMDCFPALQMHTDWVRDVA 216 (288)
Q Consensus 178 l~s~~~d~~i~iwd~~~~~~-----------------------------------------~~~~~~~~~~h~~~V~~v~ 216 (288)
|++|+.|++|+|||+.++.. .++++..+.+|.+.|++|+
T Consensus 503 LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~sva 582 (902)
T 2oaj_A 503 LAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAIN 582 (902)
T ss_dssp EEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEE
T ss_pred EEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEE
Confidence 99999999999999976521 0134567788999999999
Q ss_pred ecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcc--cceEee-ccccCeEEEEee-----cCC---CEEEEEeCCCcEEEe
Q 036510 217 WAPNLGLPKSTIASASEDGKVIIWTVAREGDQW--EGKVLH-DFKTPVYRVSWS-----LTG---NILAVADGNNNVTLW 285 (288)
Q Consensus 217 ~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~--~~~~~~-~~~~~i~~~~~s-----pdg---~~l~s~~~d~~v~~w 285 (288)
|||+ + +||+|+.|++|++||++...... ....+. +|.+.|++++|+ ||| ++|++|+.|++|++|
T Consensus 583 fSpd----G-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~w 657 (902)
T 2oaj_A 583 NSNI----G-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITY 657 (902)
T ss_dssp ECBT----S-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEE
T ss_pred ecCC----c-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEE
Confidence 9997 5 89999999999999976421100 001112 567789999999 886 899999999999999
Q ss_pred Ec
Q 036510 286 EE 287 (288)
Q Consensus 286 ~~ 287 (288)
|+
T Consensus 658 d~ 659 (902)
T 2oaj_A 658 KI 659 (902)
T ss_dssp EE
T ss_pred EE
Confidence 95
No 96
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.8e-31 Score=227.23 Aligned_cols=217 Identities=24% Similarity=0.362 Sum_probs=175.9
Q ss_pred CCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCc--eEEeEEeecCCCceeEEEeccCCCCeEEE
Q 036510 43 NTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNE--WIKDHVFEDHKSSVNSIDWAPHELGLCLA 120 (288)
Q Consensus 43 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~~~~~h~~~v~~l~~~p~~~~~~l~ 120 (288)
+......+|.||.+.|++|+|+|+ .+++|+|||.|++|+|||+..... ......+.+|...|.+++|+|+ +.+++
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~-~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d--g~~l~ 102 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQ-FPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD--GQFAL 102 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTT-CTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT--SSEEE
T ss_pred CceEEEEEECCccCCEEEEEEeCC-CCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC--CCEEE
Confidence 344566789999999999999864 468999999999999999865432 2345677899999999999998 67899
Q ss_pred EEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeee
Q 036510 121 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMD 200 (288)
Q Consensus 121 sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 200 (288)
+|+.|+.|++|+..... .......+...+..+.++|.+ ..|++++.|+.+++||+.... .
T Consensus 103 s~~~d~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--------------~~l~s~s~d~~~~~~d~~~~~---~ 162 (340)
T 4aow_A 103 SGSWDGTLRLWDLTTGT---TTRRFVGHTKDVLSVAFSSDN--------------RQIVSGSRDKTIKLWNTLGVC---K 162 (340)
T ss_dssp EEETTSEEEEEETTTTE---EEEEEECCSSCEEEEEECTTS--------------SCEEEEETTSCEEEECTTSCE---E
T ss_pred EEcccccceEEeecccc---eeeeecCCCCceeEEEEeecC--------------ccceeecCCCeEEEEEeCCCc---e
Confidence 99999999999987642 223334566678888888876 679999999999999986542 2
Q ss_pred eeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCC
Q 036510 201 CFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNN 280 (288)
Q Consensus 201 ~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~ 280 (288)
......+|...|..++|+++.. ..++++++.|++|++||++... ....+.+|.++|++++|+|+|++|++|+.|+
T Consensus 163 ~~~~~~~~~~~v~~~~~~~~~~--~~~~~s~~~d~~i~i~d~~~~~---~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg 237 (340)
T 4aow_A 163 YTVQDESHSEWVSCVRFSPNSS--NPIIVSCGWDKLVKVWNLANCK---LKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 237 (340)
T ss_dssp EEECSSSCSSCEEEEEECSCSS--SCEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred EEEEeccccCcccceEEccCCC--CcEEEEEcCCCEEEEEECCCCc---eeeEecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 3345678999999999999752 3578999999999999987532 2344566788999999999999999999999
Q ss_pred cEEEeEc
Q 036510 281 NVTLWEE 287 (288)
Q Consensus 281 ~v~~w~~ 287 (288)
+|+|||+
T Consensus 238 ~i~iwd~ 244 (340)
T 4aow_A 238 QAMLWDL 244 (340)
T ss_dssp EEEEEET
T ss_pred eEEEEEe
Confidence 9999995
No 97
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=5.2e-31 Score=235.76 Aligned_cols=236 Identities=25% Similarity=0.437 Sum_probs=193.5
Q ss_pred CccccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEE
Q 036510 4 QKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83 (288)
Q Consensus 4 ~~~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~i 83 (288)
.+.+.+|.+.|.. +++++|++|++|+.|++|++||+.. ++.+..+.+|...|++++|+ +.+|++++.|++|++
T Consensus 111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~~~~~----~~~l~s~~~dg~i~v 183 (445)
T 2ovr_B 111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVT--GKCLRTLVGHTGGVWSSQMR----DNIIISGSTDRTLKV 183 (445)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTT--CCEEEECCCCSSCEEEEEEE----TTEEEEEETTSCEEE
T ss_pred eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCC--CcEEEEEcCCCCCEEEEEec----CCEEEEEeCCCeEEE
Confidence 4467799887533 3555699999999999999999854 46788899999999999996 569999999999999
Q ss_pred eecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCC
Q 036510 84 WKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163 (288)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~ 163 (288)
||+.++. ....+.+|...|.++.|++ ..+++|+.|+.|++||++.+.. .....+|...+.++.|. +
T Consensus 184 wd~~~~~---~~~~~~~h~~~v~~~~~~~----~~l~s~s~dg~i~~wd~~~~~~---~~~~~~~~~~v~~~~~~--~-- 249 (445)
T 2ovr_B 184 WNAETGE---CIHTLYGHTSTVRCMHLHE----KRVVSGSRDATLRVWDIETGQC---LHVLMGHVAAVRCVQYD--G-- 249 (445)
T ss_dssp EETTTTE---EEEEECCCSSCEEEEEEET----TEEEEEETTSEEEEEESSSCCE---EEEEECCSSCEEEEEEC--S--
T ss_pred EECCcCc---EEEEECCCCCcEEEEEecC----CEEEEEeCCCEEEEEECCCCcE---EEEEcCCcccEEEEEEC--C--
Confidence 9997764 4566788999999999975 3589999999999999987542 34456788999999983 2
Q ss_pred CceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEee
Q 036510 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243 (288)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~ 243 (288)
.++++++.|+.|++||++++ +++..+.+|...|.++.|. +.+|++|+.|+.|++||++
T Consensus 250 ------------~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~------~~~l~~~~~d~~i~i~d~~ 307 (445)
T 2ovr_B 250 ------------RRVVSGAYDFMVKVWDPETE----TCLHTLQGHTNRVYSLQFD------GIHVVSGSLDTSIRVWDVE 307 (445)
T ss_dssp ------------SCEEEEETTSCEEEEEGGGT----EEEEEECCCSSCEEEEEEC------SSEEEEEETTSCEEEEETT
T ss_pred ------------CEEEEEcCCCEEEEEECCCC----cEeEEecCCCCceEEEEEC------CCEEEEEeCCCeEEEEECC
Confidence 67999999999999998876 4566778899999999993 3589999999999999987
Q ss_pred cCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 244 REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 244 ~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
... ....+..+...+.++.+ ++++|++|+.|++|++||.
T Consensus 308 ~~~---~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~ 346 (445)
T 2ovr_B 308 TGN---CIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDI 346 (445)
T ss_dssp TCC---EEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEET
T ss_pred CCC---EEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEEC
Confidence 542 22344566677877766 6789999999999999995
No 98
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-31 Score=239.36 Aligned_cols=243 Identities=13% Similarity=0.092 Sum_probs=188.0
Q ss_pred ccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCC-ceeeEEEe-------------------------------------
Q 036510 11 EDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNT-SQHLAKLS------------------------------------- 52 (288)
Q Consensus 11 ~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~-~~~~~~~~------------------------------------- 52 (288)
..++.+++|+++|++|+++ .++.|++||+..+. .+.+..+.
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3577899999999966655 57899999985442 11333333
Q ss_pred -----------------ccccCeEEEEecCCCCCCEE-EEeeCCCcEEEeecC--CCCceEEeEEee--cCCCceeEEEe
Q 036510 53 -----------------GHKGAVWEVAWAHPKFGSIL-ASCSFDGTVIIWKEG--NSNEWIKDHVFE--DHKSSVNSIDW 110 (288)
Q Consensus 53 -----------------~h~~~v~~~~~~~~~~~~~l-~s~s~d~~v~iwd~~--~~~~~~~~~~~~--~h~~~v~~l~~ 110 (288)
+|...|++++|+++ +.+| ++++.|++|++|++. .+.. ...+. .|...|.+++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~~dg~v~iwd~~~~~~~~---~~~~~~~~~~~~v~~~~~ 157 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSD--ESRLIACADSDKSLLVFDVDKTSKNV---LKLRKRFCFSKRPNAISI 157 (450)
T ss_dssp -----------------CCCCCEEEEEECTT--SSEEEEEEGGGTEEEEEEECSSSSSC---EEEEEEEECSSCEEEEEE
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCC--CCEEEEEECCCCeEEEEECcCCCCce---eeeeecccCCCCceEEEE
Confidence 34447999999875 7775 899999999999997 5543 22333 57789999999
Q ss_pred ccCCCCeEEEEEeCCCcEEEEeecCCCCee-eEEeeccCCCCeeEEEeCCC---CCCCceecccccCCCceeEEeecCCc
Q 036510 111 APHELGLCLACGSSDGNISVFTARADGGWD-TSRIDQAHPVGVTSVSWAPS---TAPGALVGSGFLDPVQKLCSGGCDNT 186 (288)
Q Consensus 111 ~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~-~~~~~~~~~~~v~~i~~~p~---~~~~~~~~~~~~~~~~~l~s~~~d~~ 186 (288)
+|+ +.++++|+.++.+++|++....... ......+|...|.++.|+|+ + .+|++++.|++
T Consensus 158 sp~--~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~--------------~~l~s~~~d~~ 221 (450)
T 2vdu_B 158 AED--DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGH--------------QFIITSDRDEH 221 (450)
T ss_dssp CTT--SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSC--------------EEEEEEETTSC
T ss_pred cCC--CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCC--------------cEEEEEcCCCc
Confidence 998 6789999999999999987654322 22244578899999999998 5 78999999999
Q ss_pred EEEEEEeCCceeeeeeec-cccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEee----------
Q 036510 187 VKVWKLYNGIWKMDCFPA-LQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLH---------- 255 (288)
Q Consensus 187 i~iwd~~~~~~~~~~~~~-~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~---------- 255 (288)
|++||+.++. ++.. +.+|...|.+++|+ + +.+|++|+.|++|++||+...... ..+.
T Consensus 222 i~vwd~~~~~----~~~~~~~~h~~~v~~~~~s-d----~~~l~s~~~d~~v~vwd~~~~~~~---~~~~~~~~~~~~~~ 289 (450)
T 2vdu_B 222 IKISHYPQCF----IVDKWLFGHKHFVSSICCG-K----DYLLLSAGGDDKIFAWDWKTGKNL---STFDYNSLIKPYLN 289 (450)
T ss_dssp EEEEEESCTT----CEEEECCCCSSCEEEEEEC-S----TTEEEEEESSSEEEEEETTTCCEE---EEEECHHHHGGGCC
T ss_pred EEEEECCCCc----eeeeeecCCCCceEEEEEC-C----CCEEEEEeCCCeEEEEECCCCcEe---eeecchhhhhhhhh
Confidence 9999998763 3333 56899999999999 6 478999999999999998754211 1111
Q ss_pred ---------------ccccCeEEEEeecCCCEEEEEe-CCCcEEEeEc
Q 036510 256 ---------------DFKTPVYRVSWSLTGNILAVAD-GNNNVTLWEE 287 (288)
Q Consensus 256 ---------------~~~~~i~~~~~spdg~~l~s~~-~d~~v~~w~~ 287 (288)
.....|.+++|+|+|++|++++ .|+.|+||++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 290 DQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp TTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred hcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 1234689999999999999999 8999999996
No 99
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2.7e-31 Score=231.38 Aligned_cols=247 Identities=15% Similarity=0.178 Sum_probs=176.9
Q ss_pred ccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEE-EEeeCCCcEEEee
Q 036510 7 ETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSIL-ASCSFDGTVIIWK 85 (288)
Q Consensus 7 ~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l-~s~s~d~~v~iwd 85 (288)
..+|+..|.+++|+|||++|++|+.| .+++|+... .+.+.... ...+..+++.+. ++.+ ++++.|++|++||
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~--~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLK-SFEIYNVHP--VAHIMSQE--MRHLSKVRMLHR--TNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSS-EEEEEEETT--EEEEEEEE--CSCCCEEEECTT--SSEEEEECSSTTEEEEEE
T ss_pred cccCCCceEEEEECCCCCEEEEEcCC-EEEEEecCC--cceeeeee--cCCeEEEEEcCC--CCEEEEEECCccEEEEEE
Confidence 36899999999999999999988866 578999853 33333332 234677777654 4455 6788899999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCC---------------CC------------------eEEEE--EeCCCcEEE
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHE---------------LG------------------LCLAC--GSSDGNISV 130 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~---------------~~------------------~~l~s--g~~d~~i~i 130 (288)
..++. ....+. |...|.+++|+++. .. .+++. |+.||.|++
T Consensus 88 ~~~~~---~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 88 DVKKQ---DVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHI 163 (355)
T ss_dssp TTTTE---EEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEE
T ss_pred CCCCc---EEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEE
Confidence 87764 233443 56688888887741 01 12222 577888888
Q ss_pred EeecCCCCe------------ee-EEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCc-EEEEEEeCCc
Q 036510 131 FTARADGGW------------DT-SRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNT-VKVWKLYNGI 196 (288)
Q Consensus 131 ~d~~~~~~~------------~~-~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~-i~iwd~~~~~ 196 (288)
||++.+... .+ .....+|...|.+++|+|++ ++|++|+.|++ |+|||++++
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g--------------~~l~s~s~d~~~v~iwd~~~~- 228 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS--------------DMVATCSQDGTIIRVFKTEDG- 228 (355)
T ss_dssp EECCC------------------CCEEECCCSSCEEEEEECTTS--------------SEEEEEETTCSEEEEEETTTC-
T ss_pred EECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC--------------CEEEEEeCCCCEEEEEECCCC-
Confidence 887753210 01 34567899999999999987 78999999998 999999876
Q ss_pred eeeeeeeccc-c-CCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEee-------------------
Q 036510 197 WKMDCFPALQ-M-HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLH------------------- 255 (288)
Q Consensus 197 ~~~~~~~~~~-~-h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~------------------- 255 (288)
+++..+. + |...|.+++|+|++ ++|++++.|++|++||++...... ...+.
T Consensus 229 ---~~~~~~~~g~h~~~v~~~~~s~~~----~~l~s~s~d~~v~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 300 (355)
T 3vu4_A 229 ---VLVREFRRGLDRADVVDMKWSTDG----SKLAVVSDKWTLHVFEIFNDQDNK-RHALKGWINMKYFQSEWSLCNFKL 300 (355)
T ss_dssp ---CEEEEEECTTCCSCEEEEEECTTS----CEEEEEETTCEEEEEESSCCSCCC-SEETTTTEECCCCCCSSCSEEEEC
T ss_pred ---cEEEEEEcCCCCCcEEEEEECCCC----CEEEEEECCCEEEEEEccCCCCcc-cccccceeeccccccccceeEEEe
Confidence 3455666 5 99999999999984 789999999999999997542110 01100
Q ss_pred --ccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 256 --DFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 256 --~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
....+...++|+|||++|++++.||++++|++
T Consensus 301 ~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 301 SVDKHVRGCKIAWISESSLVVVWPHTRMIETFKV 334 (355)
T ss_dssp CCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred ccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 01122467999999999999999999999984
No 100
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.4e-31 Score=244.88 Aligned_cols=246 Identities=14% Similarity=0.204 Sum_probs=201.9
Q ss_pred Cccccccccc-eEEEEEcC--CCCEEEEeeCCCcEEEEEeCCC------CceeeEEEeccccCeEEEEecCCCCCCEEEE
Q 036510 4 QKIETGHEDT-VHDVAMDY--YGKRLATASSDYSIKIIGVGNN------TSQHLAKLSGHKGAVWEVAWAHPKFGSILAS 74 (288)
Q Consensus 4 ~~~~~~h~~~-v~~~~~s~--~g~~l~s~~~d~~i~lwd~~~~------~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s 74 (288)
...+.+|.+. |.+++|+| +|++|++|+.|++|++||+..+ ..+.+..+.+|...|.+++|+++ +++|++
T Consensus 56 ~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~ 133 (615)
T 1pgu_A 56 VVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFE--GRRLCV 133 (615)
T ss_dssp EEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTT--SSEEEE
T ss_pred ceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCC--CCEEEE
Confidence 3456789999 99999999 9999999999999999999533 34667888999999999999865 899999
Q ss_pred eeCC----CcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCC
Q 036510 75 CSFD----GTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPV 150 (288)
Q Consensus 75 ~s~d----~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 150 (288)
++.| +.|++||. +. ....+..|...|.+++|+|++ ..++++++.|+.|++||++.. .......+|..
T Consensus 134 ~~~~~~~~~~v~~~d~--~~---~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~v~vwd~~~~---~~~~~~~~~~~ 204 (615)
T 1pgu_A 134 VGEGRDNFGVFISWDS--GN---SLGEVSGHSQRINACHLKQSR-PMRSMTVGDDGSVVFYQGPPF---KFSASDRTHHK 204 (615)
T ss_dssp EECCSSCSEEEEETTT--CC---EEEECCSCSSCEEEEEECSSS-SCEEEEEETTTEEEEEETTTB---EEEEEECSSSC
T ss_pred eccCCCCccEEEEEEC--CC---cceeeecCCccEEEEEECCCC-CcEEEEEeCCCcEEEEeCCCc---ceeeeecccCC
Confidence 9988 79999983 22 345677899999999999984 337899999999999998754 23345567888
Q ss_pred ---CeeEEEeCCC-CCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeecc-c---cCCcceEEEEecCCCC
Q 036510 151 ---GVTSVSWAPS-TAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPAL-Q---MHTDWVRDVAWAPNLG 222 (288)
Q Consensus 151 ---~v~~i~~~p~-~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~---~h~~~V~~v~~sp~~~ 222 (288)
.|.++.|+|+ + ++|++++.|+.|++||+.++. .+..+ . .|...|.++.|+ +
T Consensus 205 ~~~~v~~~~~~~~~~--------------~~l~~~~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~~v~~~~~~-~-- 263 (615)
T 1pgu_A 205 QGSFVRDVEFSPDSG--------------EFVITVGSDRKISCFDGKSGE----FLKYIEDDQEPVQGGIFALSWL-D-- 263 (615)
T ss_dssp TTCCEEEEEECSTTC--------------CEEEEEETTCCEEEEETTTCC----EEEECCBTTBCCCSCEEEEEES-S--
T ss_pred CCceEEEEEECCCCC--------------CEEEEEeCCCeEEEEECCCCC----EeEEecccccccCCceEEEEEc-C--
Confidence 8999999998 6 789999999999999998763 34455 4 899999999999 6
Q ss_pred CCCcEEEEEeCCCcEEEEEeecCCCcccceEeecc----ccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 223 LPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDF----KTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 223 ~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~----~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
+.+|++++.|+.|++||+.... ....+..+ ...+.++.|+ +++++++++.|+.|++||.
T Consensus 264 --~~~l~~~~~d~~i~~wd~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~ 326 (615)
T 1pgu_A 264 --SQKFATVGADATIRVWDVTTSK---CVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYEL 326 (615)
T ss_dssp --SSEEEEEETTSEEEEEETTTTE---EEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEET
T ss_pred --CCEEEEEcCCCcEEEEECCCCc---EEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEEC
Confidence 4789999999999999987532 11222222 3578888886 9999999999999999995
No 101
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.1e-30 Score=233.74 Aligned_cols=233 Identities=21% Similarity=0.367 Sum_probs=194.5
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
.+.+|.+.|.+++|+ +++|++|+.|++|++||+.. ++.+..+.+|...|.++.|+ +..+++++.|++|++||
T Consensus 154 ~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~~~~~----~~~l~s~s~dg~i~~wd 225 (445)
T 2ovr_B 154 TLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAET--GECIHTLYGHTSTVRCMHLH----EKRVVSGSRDATLRVWD 225 (445)
T ss_dssp ECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEEE----TTEEEEEETTSEEEEEE
T ss_pred EEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCc--CcEEEEECCCCCcEEEEEec----CCEEEEEeCCCEEEEEE
Confidence 456899999999998 67999999999999999854 47788899999999999995 57899999999999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCc
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGA 165 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~ 165 (288)
+.++. ....+.+|...|.+++|+ +.++++|+.|+.|++||++.+. ......+|...|.++.|+ +
T Consensus 226 ~~~~~---~~~~~~~~~~~v~~~~~~----~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~--~---- 289 (445)
T 2ovr_B 226 IETGQ---CLHVLMGHVAAVRCVQYD----GRRVVSGAYDFMVKVWDPETET---CLHTLQGHTNRVYSLQFD--G---- 289 (445)
T ss_dssp SSSCC---EEEEEECCSSCEEEEEEC----SSCEEEEETTSCEEEEEGGGTE---EEEEECCCSSCEEEEEEC--S----
T ss_pred CCCCc---EEEEEcCCcccEEEEEEC----CCEEEEEcCCCEEEEEECCCCc---EeEEecCCCCceEEEEEC--C----
Confidence 98765 445677899999999983 4568999999999999998653 334456788899999983 2
Q ss_pred eecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecC
Q 036510 166 LVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245 (288)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~ 245 (288)
..+++++.|+.|++||++++ +++..+.+|...+.++.+++ .+|++|+.|+.|++||++..
T Consensus 290 ----------~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~~------~~l~~~~~dg~i~vwd~~~~ 349 (445)
T 2ovr_B 290 ----------IHVVSGSLDTSIRVWDVETG----NCIHTLTGHQSLTSGMELKD------NILVSGNADSTVKIWDIKTG 349 (445)
T ss_dssp ----------SEEEEEETTSCEEEEETTTC----CEEEEECCCCSCEEEEEEET------TEEEEEETTSCEEEEETTTC
T ss_pred ----------CEEEEEeCCCeEEEEECCCC----CEEEEEcCCcccEEEEEEeC------CEEEEEeCCCeEEEEECCCC
Confidence 67999999999999999876 35567788999999999865 47999999999999998653
Q ss_pred CCcccceEeec---cccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 246 GDQWEGKVLHD---FKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 246 ~~~~~~~~~~~---~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
. ....+.. +..+|.+++|+ +++|++|+.||+|++||+
T Consensus 350 ~---~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 350 Q---CLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL 389 (445)
T ss_dssp C---EEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEET
T ss_pred c---EEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEEC
Confidence 2 1223333 66789999995 689999999999999995
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-30 Score=234.33 Aligned_cols=252 Identities=15% Similarity=0.076 Sum_probs=190.2
Q ss_pred cccccceEEEEEcCCCCEE-EEeeCCCcEEEEEeCCCCceeeEEEe--ccccCeEEEEecCCCCCCEEEEeeCCCcEEEe
Q 036510 8 TGHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGVGNNTSQHLAKLS--GHKGAVWEVAWAHPKFGSILASCSFDGTVIIW 84 (288)
Q Consensus 8 ~~h~~~v~~~~~s~~g~~l-~s~~~d~~i~lwd~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iw 84 (288)
.+|.+.|.+++|+|+|++| ++|+.|++|++||+....+..+..+. .|...|.+++|+++ +.+|++++.|+.+++|
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~~g~v~~~ 176 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED--DTTVIIADKFGDVYSI 176 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT--SSEEEEEETTSEEEEE
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCC--CCEEEEEeCCCcEEEE
Confidence 4677889999999999996 89999999999999622335566665 56788999999864 8999999999999999
Q ss_pred ecCCCCceE-EeEEeecCCCceeEEEeccC-CCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCC
Q 036510 85 KEGNSNEWI-KDHVFEDHKSSVNSIDWAPH-ELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTA 162 (288)
Q Consensus 85 d~~~~~~~~-~~~~~~~h~~~v~~l~~~p~-~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~ 162 (288)
++.+..... ....+.+|...|++++|+|+ +.+.++++|+.|+.|++||++.+... .....+|...|.++.|+ ++
T Consensus 177 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~--~~~~~~h~~~v~~~~~s-d~- 252 (450)
T 2vdu_B 177 DINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIV--DKWLFGHKHFVSSICCG-KD- 252 (450)
T ss_dssp ETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCE--EEECCCCSSCEEEEEEC-ST-
T ss_pred ecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCcee--eeeecCCCCceEEEEEC-CC-
Confidence 987654321 22356679999999999997 23568999999999999999876432 23356799999999999 65
Q ss_pred CCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccc-------------------------cCCcceEEEEe
Q 036510 163 PGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQ-------------------------MHTDWVRDVAW 217 (288)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-------------------------~h~~~V~~v~~ 217 (288)
.+|++++.|++|++||+.++.. +..+. .+...|.++.|
T Consensus 253 -------------~~l~s~~~d~~v~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 315 (450)
T 2vdu_B 253 -------------YLLLSAGGDDKIFAWDWKTGKN----LSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK 315 (450)
T ss_dssp -------------TEEEEEESSSEEEEEETTTCCE----EEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred -------------CEEEEEeCCCeEEEEECCCCcE----eeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence 7899999999999999987632 22221 23456999999
Q ss_pred cCCCCCCCcEEEEEe-CCCcEEEEEe--ecCCCcccceEeeccccCeEEEEeecCCCEEEEEeC------CCcEEEeEc
Q 036510 218 APNLGLPKSTIASAS-EDGKVIIWTV--AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADG------NNNVTLWEE 287 (288)
Q Consensus 218 sp~~~~~~~~l~s~s-~D~~i~iw~~--~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~------d~~v~~w~~ 287 (288)
+|+. .+|++++ .|+.|++|++ ...........+..+ ..|.+++|+|++.++++++. ++.|+||.+
T Consensus 316 ~~~~----~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~ 389 (450)
T 2vdu_B 316 SKNL----PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEY 389 (450)
T ss_dssp CSSS----SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEE
T ss_pred eCCC----CEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEE
Confidence 9974 6788888 8999999999 322111122233333 78999999996544444443 556899873
No 103
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.6e-31 Score=233.65 Aligned_cols=205 Identities=16% Similarity=0.148 Sum_probs=161.5
Q ss_pred ccccceEEEEEcCCCCEEE--EeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeec
Q 036510 9 GHEDTVHDVAMDYYGKRLA--TASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE 86 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l~--s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~ 86 (288)
.++..+..++|||||++|+ +++.|++|+|||+.. .+.+..+. |...|++++|+|+ |++|++++.|+ +++|+.
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~--~~~~~~~~-~~~~V~~v~fspd--g~~l~s~s~~~-~~~~~~ 204 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSD--LTEKFEIE-TRGEVKDLHFSTD--GKVVAYITGSS-LEVIST 204 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTT--TEEEEEEE-CSSCCCEEEECTT--SSEEEEECSSC-EEEEET
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCC--CcEEEEeC-CCCceEEEEEccC--CceEEecccee-EEEEEe
Confidence 4566788999999999876 455799999999854 46666665 7888999999875 89999998665 555555
Q ss_pred CCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCC----cEEEEeecCCCCe-eeEEeeccCCCCeeEEEeCCCC
Q 036510 87 GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG----NISVFTARADGGW-DTSRIDQAHPVGVTSVSWAPST 161 (288)
Q Consensus 87 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~----~i~i~d~~~~~~~-~~~~~~~~~~~~v~~i~~~p~~ 161 (288)
.++.. ........|...|.+++|+|+ +.++++++.|+ .+++|++...... .......+|...|.+++|+|++
T Consensus 205 ~~~~~-~~~~~~~~~~~~v~~v~fspd--g~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg 281 (365)
T 4h5i_A 205 VTGSC-IARKTDFDKNWSLSKINFIAD--DTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKG 281 (365)
T ss_dssp TTCCE-EEEECCCCTTEEEEEEEEEET--TEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTS
T ss_pred ccCcc-eeeeecCCCCCCEEEEEEcCC--CCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCC
Confidence 55442 222344568889999999998 67788888777 6788888754321 1223456788999999999997
Q ss_pred CCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeec-cccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEE
Q 036510 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPA-LQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW 240 (288)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw 240 (288)
++|++|+.|++|+|||+.++ +++.. +.+|..+|++|+|+|++ ++|||||.|++||||
T Consensus 282 --------------~~lasgs~D~~V~iwd~~~~----~~~~~~~~gH~~~V~~v~fSpdg----~~laS~S~D~tvrvw 339 (365)
T 4h5i_A 282 --------------ELAVLASNDNSIALVKLKDL----SMSKIFKQAHSFAITEVTISPDS----TYVASVSAANTIHII 339 (365)
T ss_dssp --------------CEEEEEETTSCEEEEETTTT----EEEEEETTSSSSCEEEEEECTTS----CEEEEEETTSEEEEE
T ss_pred --------------CceEEEcCCCEEEEEECCCC----cEEEEecCcccCCEEEEEECCCC----CEEEEEeCCCeEEEE
Confidence 78999999999999999876 34444 57999999999999984 789999999999999
Q ss_pred Eeec
Q 036510 241 TVAR 244 (288)
Q Consensus 241 ~~~~ 244 (288)
++..
T Consensus 340 ~ip~ 343 (365)
T 4h5i_A 340 KLPL 343 (365)
T ss_dssp ECCT
T ss_pred EcCC
Confidence 9854
No 104
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.3e-31 Score=253.15 Aligned_cols=248 Identities=21% Similarity=0.282 Sum_probs=203.2
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
.+.+|...|.+++|+|+|++|++|+.|++|++|++.. ++.+..+.+|...|++++|+++ +.+|++++.|++|++|+
T Consensus 50 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~--~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~vw~ 125 (814)
T 3mkq_A 50 SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT--GEKVVDFEAHPDYIRSIAVHPT--KPYVLSGSDDLTVKLWN 125 (814)
T ss_dssp EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT--CCEEEEEECCSSCEEEEEECSS--SSEEEEEETTSEEEEEE
T ss_pred EEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCC--CcEEEEEecCCCCEEEEEEeCC--CCEEEEEcCCCEEEEEE
Confidence 3458999999999999999999999999999999854 4678889999999999999865 88999999999999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCC--CCCC
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP--STAP 163 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p--~~~~ 163 (288)
+.++.. ....+..|...|.+++|+|.+ +..+++++.|+.|++||++.+... ......+...+.++.|+| ++
T Consensus 126 ~~~~~~--~~~~~~~~~~~v~~~~~~p~~-~~~l~~~~~dg~v~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~-- 198 (814)
T 3mkq_A 126 WENNWA--LEQTFEGHEHFVMCVAFNPKD-PSTFASGCLDRTVKVWSLGQSTPN--FTLTTGQERGVNYVDYYPLPDK-- 198 (814)
T ss_dssp GGGTSE--EEEEEECCSSCEEEEEEETTE-EEEEEEEETTSEEEEEETTCSSCS--EEEECCCTTCCCEEEECCSTTC--
T ss_pred CCCCce--EEEEEcCCCCcEEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCcce--eEEecCCCCCEEEEEEEECCCC--
Confidence 976532 445677899999999999932 678999999999999999765432 223334557899999998 54
Q ss_pred CceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEee
Q 036510 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243 (288)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~ 243 (288)
.++++++.|+.|++||+.++ +++..+.+|...|.++.|+|++ .+|++++.|+.|++||+.
T Consensus 199 ------------~~l~~~~~dg~i~~~d~~~~----~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~v~vwd~~ 258 (814)
T 3mkq_A 199 ------------PYMITASDDLTIKIWDYQTK----SCVATLEGHMSNVSFAVFHPTL----PIIISGSEDGTLKIWNSS 258 (814)
T ss_dssp ------------CEEEEECTTSEEEEEETTTT----EEEEEEECCSSCEEEEEECSSS----SEEEEEETTSCEEEEETT
T ss_pred ------------CEEEEEeCCCEEEEEECCCC----cEEEEEcCCCCCEEEEEEcCCC----CEEEEEeCCCeEEEEECC
Confidence 68999999999999998776 3556678899999999999984 689999999999999987
Q ss_pred cCCCcccceEeeccccCeEEEEeecCCCE-EEEEeCCCcEEEeEc
Q 036510 244 REGDQWEGKVLHDFKTPVYRVSWSLTGNI-LAVADGNNNVTLWEE 287 (288)
Q Consensus 244 ~~~~~~~~~~~~~~~~~i~~~~~spdg~~-l~s~~~d~~v~~w~~ 287 (288)
... ....+..+...+.+++|+|+|+. +++++.|+.+.+|+.
T Consensus 259 ~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (814)
T 3mkq_A 259 TYK---VEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300 (814)
T ss_dssp TCS---EEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEEC
T ss_pred CCc---EEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEc
Confidence 532 22344556678999999999974 244556777888874
No 105
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-31 Score=257.82 Aligned_cols=243 Identities=16% Similarity=0.188 Sum_probs=187.3
Q ss_pred cccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecC
Q 036510 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEG 87 (288)
Q Consensus 8 ~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~ 87 (288)
.||.+.|++++|+|+|++||+|+.|++|+||+... .+.+.. ..|...|++++|++ +++|++++.|++|++||+.
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~--~~~~~~-~~~~~~V~~l~fsp---g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQ--VEVVIK-LEDRSAIKEMRFVK---GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTT--CEEEEE-CSSCCCEEEEEEET---TTEEEEEETTCEEEEEETT
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCC--cEEEEE-cCCCCCEEEEEEcC---CCEEEEEECcCeEEEEECC
Confidence 48999999999999999999999999999999753 233333 35888999999985 5699999999999999998
Q ss_pred CCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeE---------EeeccCCCCeeEEEeC
Q 036510 88 NSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTS---------RIDQAHPVGVTSVSWA 158 (288)
Q Consensus 88 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~---------~~~~~~~~~v~~i~~~ 158 (288)
++. ....+. |...|++++|+|+ +.++++|+.||+|++||++.... ... ....+|...|.+++|+
T Consensus 88 ~~~---~~~~~~-~~~~V~~v~~sp~--g~~l~sgs~dg~V~lwd~~~~~~-~~~~i~~~~~~~~~~~~h~~~V~sl~~s 160 (902)
T 2oaj_A 88 SQK---VLTTVF-VPGKITSIDTDAS--LDWMLIGLQNGSMIVYDIDRDQL-SSFKLDNLQKSSFFPAARLSPIVSIQWN 160 (902)
T ss_dssp TCS---EEEEEE-CSSCEEEEECCTT--CSEEEEEETTSCEEEEETTTTEE-EEEEECCHHHHHTCSSSCCCCCCEEEEE
T ss_pred CCc---EEEEEc-CCCCEEEEEECCC--CCEEEEEcCCCcEEEEECCCCcc-ccceeccccccccccccCCCCeEEEEEc
Confidence 765 334454 6689999999998 67899999999999999976532 111 1235788999999999
Q ss_pred CCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccc------------------cCCcceEEEEecCC
Q 036510 159 PSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQ------------------MHTDWVRDVAWAPN 220 (288)
Q Consensus 159 p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~------------------~h~~~V~~v~~sp~ 220 (288)
|++. ..+++|+.|+.| +||++++. ++..+. .|...|.+++|+|+
T Consensus 161 p~~~-------------~~l~~g~~dg~v-lWd~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspd 222 (902)
T 2oaj_A 161 PRDI-------------GTVLISYEYVTL-TYSLVENE----IKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPN 222 (902)
T ss_dssp TTEE-------------EEEEEECSSCEE-EEETTTTE----EEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTT
T ss_pred cCCC-------------CEEEEEeCCCcE-EEECCCCc----eEEEEecccCCcCCCcccccccccccCCCeEEEEEcCC
Confidence 9742 578999999999 99998763 222333 34678999999998
Q ss_pred CCCCCcEEEEEeCCCcEEEEEeecCCCcccceEe-----e-----------ccccCeEEEEee----cCC-CEEEEEeCC
Q 036510 221 LGLPKSTIASASEDGKVIIWTVAREGDQWEGKVL-----H-----------DFKTPVYRVSWS----LTG-NILAVADGN 279 (288)
Q Consensus 221 ~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~-----~-----------~~~~~i~~~~~s----pdg-~~l~s~~~d 279 (288)
+ .+||+|+.|++|++||++..+ ......+ + .+..+|++++|+ ||+ .+|++|+.|
T Consensus 223 g----~~lasgs~Dg~i~lWd~~~g~-~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~ 297 (902)
T 2oaj_A 223 S----LHIITIHEDNSLVFWDANSGH-MIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSI 297 (902)
T ss_dssp S----SEEEEEETTCCEEEEETTTCC-EEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECS
T ss_pred C----CEEEEEECCCeEEEEECCCCc-EEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCC
Confidence 4 789999999999999986532 1110011 1 123479999996 554 567777665
Q ss_pred C-----cEEEeE
Q 036510 280 N-----NVTLWE 286 (288)
Q Consensus 280 ~-----~v~~w~ 286 (288)
. ++++|+
T Consensus 298 ~~~~~~~v~~~~ 309 (902)
T 2oaj_A 298 SRGDNQSLTMID 309 (902)
T ss_dssp TTSSCCCEEEEE
T ss_pred CCCCCceEEEEe
Confidence 3 788887
No 106
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.9e-30 Score=230.71 Aligned_cols=240 Identities=24% Similarity=0.387 Sum_probs=189.0
Q ss_pred eEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceE
Q 036510 14 VHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWI 93 (288)
Q Consensus 14 v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~ 93 (288)
.+.|.||++ ++|+.| .|++|+|||...+....+..+.+|...|++|+|+++ |++|++|+.|++|+|||+.++.
T Consensus 108 ~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspd--g~~lasgs~Dg~v~iWd~~~~~--- 180 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE--GNYLAVGTSSAEVQLWDVQQQK--- 180 (420)
T ss_dssp CBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT--SSEEEEEETTSCEEEEETTTTE---
T ss_pred ceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCC--CCEEEEEECCCeEEEEEcCCCc---
Confidence 455889975 466654 599999999865433334455678889999999864 8999999999999999998764
Q ss_pred EeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccC
Q 036510 94 KDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLD 173 (288)
Q Consensus 94 ~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~ 173 (288)
....+.+|...+.++++++ .++++|+.|+.+++||.+.... ......+|...+..+.|+|++
T Consensus 181 ~~~~~~~h~~~v~~~s~~~----~~l~sgs~d~~i~~~d~~~~~~--~~~~~~~h~~~~~~~~~~~~g------------ 242 (420)
T 4gga_A 181 RLRNMTSHSARVGSLSWNS----YILSSGSRSGHIHHHDVRVAEH--HVATLSGHSQEVCGLRWAPDG------------ 242 (420)
T ss_dssp EEEEECCCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSSC--EEEEEECCSSCEEEEEECTTS------------
T ss_pred EEEEEeCCCCceEEEeeCC----CEEEEEeCCCceeEeeecccce--eeEEecccccceeeeeecCCC------------
Confidence 4566788999999999875 4789999999999999876533 334567899999999999987
Q ss_pred CCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEE--eCCCcEEEEEeecCCCcccc
Q 036510 174 PVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA--SEDGKVIIWTVAREGDQWEG 251 (288)
Q Consensus 174 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~--s~D~~i~iw~~~~~~~~~~~ 251 (288)
.++++++.|+.+++||...+......+.....|...|.++.|+|.. ..+++++ +.|++|++||+.... ..
T Consensus 243 --~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~---~~~la~~~gs~D~~I~iwd~~t~~---~~ 314 (420)
T 4gga_A 243 --RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQ---SNVLATGGGTSDRHIRIWNVCSGA---CL 314 (420)
T ss_dssp --SEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTC---TTEEEEEECTTTCEEEEEETTTTE---EE
T ss_pred --CeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCc---ccEEEEEeecCCCEEEEEeCCccc---cc
Confidence 7899999999999999977643323344567899999999999975 4566654 579999999987532 11
Q ss_pred eEeeccccCeEEEEeecCCCEEEEEe--CCCcEEEeEc
Q 036510 252 KVLHDFKTPVYRVSWSLTGNILAVAD--GNNNVTLWEE 287 (288)
Q Consensus 252 ~~~~~~~~~i~~~~~spdg~~l~s~~--~d~~v~~w~~ 287 (288)
.. ......+.++.|+|+++.+++++ .|++|+|||.
T Consensus 315 ~~-~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~ 351 (420)
T 4gga_A 315 SA-VDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKY 351 (420)
T ss_dssp EE-EECSSCEEEEEEETTTTEEEEEECTTTCCEEEEET
T ss_pred ee-eccccceeeeeecCCCCeEEEEEecCCCEEEEEEC
Confidence 12 23346799999999999998876 6899999995
No 107
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-31 Score=228.56 Aligned_cols=222 Identities=23% Similarity=0.369 Sum_probs=176.9
Q ss_pred eeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC
Q 036510 46 QHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125 (288)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d 125 (288)
+.+..+.+|...|.+++|+++ +.+|++++.|+.|+||++... .......+.+|...|++++|+|+..+.++++|+.|
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~--~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d 78 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYY--GKRLATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD 78 (379)
T ss_dssp ---CCEEECCCCEEEEEECSS--SSEEEEEETTSCEEEEEEETT-EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred CccEEecCCcccEEEEEEcCC--CCEEEEEECCCcEEEEecCCC-cceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC
Confidence 345678999999999999864 889999999999999998643 23355667889999999999876446789999999
Q ss_pred CcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCC--CCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeee
Q 036510 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS--TAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFP 203 (288)
Q Consensus 126 ~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~--~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 203 (288)
+.|++||++.+. +........|...|.++.|+|+ + .+|++++.|+.|++||+..+... ...
T Consensus 79 g~v~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~--------------~~l~~~~~d~~i~v~d~~~~~~~--~~~ 141 (379)
T 3jrp_A 79 GKVLIWKEENGR-WSQIAVHAVHSASVNSVQWAPHEYG--------------PLLLVASSDGKVSVVEFKENGTT--SPI 141 (379)
T ss_dssp SCEEEEEEETTE-EEEEEEECCCSSCEEEEEECCGGGC--------------SEEEEEETTSEEEEEECCTTSCC--CEE
T ss_pred CEEEEEEcCCCc-eeEeeeecCCCcceEEEEeCCCCCC--------------CEEEEecCCCcEEEEecCCCCce--eeE
Confidence 999999998653 2234455678899999999998 5 68999999999999999875221 223
Q ss_pred ccccCCcceEEEEecCCCCC---------CCcEEEEEeCCCcEEEEEeecCCCcc-cceEeeccccCeEEEEeecC---C
Q 036510 204 ALQMHTDWVRDVAWAPNLGL---------PKSTIASASEDGKVIIWTVAREGDQW-EGKVLHDFKTPVYRVSWSLT---G 270 (288)
Q Consensus 204 ~~~~h~~~V~~v~~sp~~~~---------~~~~l~s~s~D~~i~iw~~~~~~~~~-~~~~~~~~~~~i~~~~~spd---g 270 (288)
.+.+|...|.++.|+|.... .+.+|++++.|+.|++||++...... ....+..|..+|.+++|+|+ +
T Consensus 142 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~ 221 (379)
T 3jrp_A 142 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLR 221 (379)
T ss_dssp EEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSS
T ss_pred EecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCC
Confidence 45789999999999993100 14689999999999999998643221 12344567789999999999 8
Q ss_pred CEEEEEeCCCcEEEeEc
Q 036510 271 NILAVADGNNNVTLWEE 287 (288)
Q Consensus 271 ~~l~s~~~d~~v~~w~~ 287 (288)
++|++++.|++|+|||.
T Consensus 222 ~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 222 SYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp EEEEEEETTSCEEEEEE
T ss_pred CeEEEEeCCCEEEEEeC
Confidence 99999999999999995
No 108
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.2e-31 Score=229.03 Aligned_cols=238 Identities=14% Similarity=0.195 Sum_probs=191.0
Q ss_pred cccccccceEEEEEcCCCC-EEEEeeCCCcEEEEEe-CCCCceeeEEEec--cccCeEEEEecCCCCCCEEEEeeCCCcE
Q 036510 6 IETGHEDTVHDVAMDYYGK-RLATASSDYSIKIIGV-GNNTSQHLAKLSG--HKGAVWEVAWAHPKFGSILASCSFDGTV 81 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~-~l~s~~~d~~i~lwd~-~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~l~s~s~d~~v 81 (288)
...+|...|.+++|+|+++ +|++|+.|+.|++|++ ... ....+.+ |...|.+++|++ +.+|++++.|+.|
T Consensus 51 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~---~~~~~~~~~~~~~v~~l~~~~---~~~l~s~~~d~~i 124 (342)
T 1yfq_A 51 QSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP---SFQALTNNEANLGICRICKYG---DDKLIAASWDGLI 124 (342)
T ss_dssp EEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSS---SEEECBSCCCCSCEEEEEEET---TTEEEEEETTSEE
T ss_pred eeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCC---ceEeccccCCCCceEEEEeCC---CCEEEEEcCCCeE
Confidence 3458999999999999999 9999999999999998 654 2467788 999999999985 6899999999999
Q ss_pred EEeecCC---------CCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecC-CCCeeeEEeeccCCCC
Q 036510 82 IIWKEGN---------SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARA-DGGWDTSRIDQAHPVG 151 (288)
Q Consensus 82 ~iwd~~~---------~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~ 151 (288)
++||++. .. ....+. |...|.+++|+|+ . +++++.|+.|++||++. ... ........|...
T Consensus 125 ~iwd~~~~~~~~~~~~~~---~~~~~~-~~~~v~~~~~~~~--~--l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~ 195 (342)
T 1yfq_A 125 EVIDPRNYGDGVIAVKNL---NSNNTK-VKNKIFTMDTNSS--R--LIVGMNNSQVQWFRLPLCEDD-NGTIEESGLKYQ 195 (342)
T ss_dssp EEECHHHHTTBCEEEEES---CSSSSS-SCCCEEEEEECSS--E--EEEEESTTEEEEEESSCCTTC-CCEEEECSCSSC
T ss_pred EEEcccccccccccccCC---eeeEEe-eCCceEEEEecCC--c--EEEEeCCCeEEEEECCccccc-cceeeecCCCCc
Confidence 9999865 32 223343 7889999999986 2 88899999999999987 432 122344567888
Q ss_pred eeEEEeCC-CCCCCceecccccCCCceeEEeecCCcEEEEEEeCC--ceeeeeeeccccCCc---------ceEEEEecC
Q 036510 152 VTSVSWAP-STAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNG--IWKMDCFPALQMHTD---------WVRDVAWAP 219 (288)
Q Consensus 152 v~~i~~~p-~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--~~~~~~~~~~~~h~~---------~V~~v~~sp 219 (288)
+.++.|+| ++ +++++++.|+.|++||+... ....+....+..|.. .|.+++|+|
T Consensus 196 i~~i~~~~~~~--------------~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 261 (342)
T 1yfq_A 196 IRDVALLPKEQ--------------EGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP 261 (342)
T ss_dssp EEEEEECSGGG--------------CEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT
T ss_pred eeEEEECCCCC--------------CEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC
Confidence 99999999 76 78999999999999998764 100123334555644 899999999
Q ss_pred CCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeecc-ccCeEEEEeecCCCEEEEEeCCCc
Q 036510 220 NLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDF-KTPVYRVSWSLTGNILAVADGNNN 281 (288)
Q Consensus 220 ~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~-~~~i~~~~~spdg~~l~s~~~d~~ 281 (288)
++ .+|++++.|+.|++||+.... ....+..| ..+|.+++ |+|++|++|+.|++
T Consensus 262 ~~----~~l~~~~~dg~i~vwd~~~~~---~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 262 RH----KFLYTAGSDGIISCWNLQTRK---KIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp TT----CCEEEEETTSCEEEEETTTTE---EEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred CC----CEEEEecCCceEEEEcCccHh---HhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 74 689999999999999987532 22345566 78899999 99999999999998
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-31 Score=242.03 Aligned_cols=237 Identities=15% Similarity=0.146 Sum_probs=181.2
Q ss_pred ccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCC---------------------------ceeeEEEe-ccccCeEEEE
Q 036510 11 EDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNT---------------------------SQHLAKLS-GHKGAVWEVA 62 (288)
Q Consensus 11 ~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~---------------------------~~~~~~~~-~h~~~v~~~~ 62 (288)
+.+|.+|+|+|||+++||+|.|++|+ |..... .+....+. +|...|++++
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~va 92 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCK 92 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEE
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEE
Confidence 58899999999999999999999995 321100 00011122 5678899999
Q ss_pred ecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCC-----ceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCC
Q 036510 63 WAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKS-----SVNSIDWAPHELGLCLACGSSDGNISVFTARADG 137 (288)
Q Consensus 63 ~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~-----~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~ 137 (288)
|||+ |.+||+++.||+|++|+... ....+. |.. .|.+++|+|+ +.+||+|+.||+|++||+..+.
T Consensus 93 wSPd--G~~LAs~s~dg~V~iwd~~~-----~l~~l~-~~~~~~~~sv~svafSPD--G~~LAsgs~DGtVkIWd~~~~~ 162 (588)
T 2j04_A 93 PSPI--DDWMAVLSNNGNVSVFKDNK-----MLTNLD-SKGNLSSRTYHCFEWNPI--ESSIVVGNEDGELQFFSIRKNS 162 (588)
T ss_dssp ECSS--SSCEEEEETTSCEEEEETTE-----EEEECC-CSSCSTTTCEEEEEECSS--SSCEEEEETTSEEEEEECCCCT
T ss_pred ECCC--CCEEEEEeCCCcEEEEeCCc-----eeeecc-CCCccccccEEEEEEcCC--CCEEEEEcCCCEEEEEECCCCc
Confidence 9975 89999999999999999532 334455 555 4999999998 7889999999999999998653
Q ss_pred C----eeeEEe----eccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeecc-ccC
Q 036510 138 G----WDTSRI----DQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPAL-QMH 208 (288)
Q Consensus 138 ~----~~~~~~----~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~h 208 (288)
. +-.... ..+|...|.+++|+|+ . +++++.|++|++||+.++.. .+....+ .+|
T Consensus 163 l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd---------------g-Laass~D~tVrlWd~~~~~~-~~~~~tL~~~h 225 (588)
T 2j04_A 163 ENTPEFYFESSIRLSDAGSKDWVTHIVWYED---------------V-LVAALSNNSVFSMTVSASSH-QPVSRMIQNAS 225 (588)
T ss_dssp TTCCCCEEEEEEECSCTTCCCCEEEEEEETT---------------E-EEEEETTCCEEEECCCSSSS-CCCEEEEECCC
T ss_pred cccccceeeeeeecccccccccEEEEEEcCC---------------c-EEEEeCCCeEEEEECCCCcc-ccceeeecccc
Confidence 2 011222 2678889999999997 4 78899999999999977531 0122345 478
Q ss_pred CcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEe--ecCCCEEEEEeCCCcEEEeE
Q 036510 209 TDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSW--SLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 209 ~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~--spdg~~l~s~~~d~~v~~w~ 286 (288)
...|.+|+|+ + ++||+++ |++|++||+.... ......+|.+.+++++| +||++.|++++.||+ +||.
T Consensus 226 ~~~V~svaFs-g-----~~LASa~-~~tIkLWd~~~~~---~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~ 294 (588)
T 2j04_A 226 RRKITDLKIV-D-----YKVVLTC-PGYVHKIDLKNYS---ISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLL 294 (588)
T ss_dssp SSCCCCEEEE-T-----TEEEEEC-SSEEEEEETTTTE---EEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEE
T ss_pred cCcEEEEEEE-C-----CEEEEEe-CCeEEEEECCCCe---EEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEe
Confidence 8899999999 3 5788887 6999999987431 11223378899999999 999999999999999 9997
Q ss_pred c
Q 036510 287 E 287 (288)
Q Consensus 287 ~ 287 (288)
.
T Consensus 295 ~ 295 (588)
T 2j04_A 295 E 295 (588)
T ss_dssp S
T ss_pred e
Confidence 4
No 110
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.1e-29 Score=216.10 Aligned_cols=242 Identities=23% Similarity=0.365 Sum_probs=186.1
Q ss_pred eEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceE
Q 036510 14 VHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWI 93 (288)
Q Consensus 14 v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~ 93 (288)
.+.|+||+++ +|++ +.|++|+|||+..+....+..+.+|...|.+++|+++ +++|++|+.|++|++|++.++.
T Consensus 28 ~~~l~WS~~~-~lAv-g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~--~~~l~sgs~Dg~v~iw~~~~~~--- 100 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAV-ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE--GNYLAVGTSSAEVQLWDVQQQK--- 100 (318)
T ss_dssp CBCEEECTTS-EEEE-EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT--SSEEEEEETTSEEEEEETTTTE---
T ss_pred ceEEEECCCC-EEEE-EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCC--CCEEEEEECCCcEEEeecCCce---
Confidence 4678999876 6655 5699999999864432223344578888999999865 8999999999999999998765
Q ss_pred EeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccC
Q 036510 94 KDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLD 173 (288)
Q Consensus 94 ~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~ 173 (288)
....+.+|...+.++++.+ .++++|+.++.+++|+...... ......+|...+..+.|.+++
T Consensus 101 ~~~~~~~h~~~~~~~~~~~----~~l~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------------ 162 (318)
T 4ggc_A 101 RLRNMTSHSARVGSLSWNS----YILSSGSRSGHIHHHDVRVAEH--HVATLSGHSQEVCGLRWAPDG------------ 162 (318)
T ss_dssp EEEEEECCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSSC--EEEEEECCSSCEEEEEECTTS------------
T ss_pred eEEEecCccceEEEeecCC----CEEEEEecCCceEeeecCCCce--eEEEEcCccCceEEEEEcCCC------------
Confidence 4566788998888887654 4689999999999999876432 334556889999999999987
Q ss_pred CCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceE
Q 036510 174 PVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKV 253 (288)
Q Consensus 174 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~ 253 (288)
.+|++++.|++|++||++++............|...|.++.++|+... .-.+++++.|++|++|+..... ...
T Consensus 163 --~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~i~lwd~~~~~----~~~ 235 (318)
T 4ggc_A 163 --RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSN-VLATGGGTSDRHIRIWNVCSGA----CLS 235 (318)
T ss_dssp --SEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTT-EEEEEECTTTCEEEEEETTTCC----EEE
T ss_pred --CEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCc-EEEEEecCCCCEEEEEeccccc----ccc
Confidence 789999999999999998754332334445678888999999997521 1123567789999999976532 122
Q ss_pred eeccccCeEEEEeecCCCEEEEEe--CCCcEEEeEc
Q 036510 254 LHDFKTPVYRVSWSLTGNILAVAD--GNNNVTLWEE 287 (288)
Q Consensus 254 ~~~~~~~i~~~~~spdg~~l~s~~--~d~~v~~w~~ 287 (288)
...+...+..+.|+|+++.+++++ .|++|+|||.
T Consensus 236 ~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~ 271 (318)
T 4ggc_A 236 AVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKY 271 (318)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEET
T ss_pred cccceeeeeeeeecccccceEEEEEcCCCEEEEEEC
Confidence 334567899999999999988765 7999999995
No 111
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2e-30 Score=233.79 Aligned_cols=233 Identities=14% Similarity=0.111 Sum_probs=177.5
Q ss_pred ccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEecccc-----CeEEEEecCCCCCCEEEEeeCCCcEEE
Q 036510 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKG-----AVWEVAWAHPKFGSILASCSFDGTVII 83 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~~l~s~s~d~~v~i 83 (288)
+|++.|.+++|||+|++||+++.|++|++||.. .++..+. |+. .|.+++|+|+ |++|++|+.||+|+|
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~----~~l~~l~-~~~~~~~~sv~svafSPD--G~~LAsgs~DGtVkI 155 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDN----KMLTNLD-SKGNLSSRTYHCFEWNPI--ESSIVVGNEDGELQF 155 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETT----EEEEECC-CSSCSTTTCEEEEEECSS--SSCEEEEETTSEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCC----ceeeecc-CCCccccccEEEEEEcCC--CCEEEEEcCCCEEEE
Confidence 678999999999999999999999999999953 2566677 776 4999999875 999999999999999
Q ss_pred eecCCCCc----eEEeEEe----ecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEee-ccCCCCeeE
Q 036510 84 WKEGNSNE----WIKDHVF----EDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRID-QAHPVGVTS 154 (288)
Q Consensus 84 wd~~~~~~----~~~~~~~----~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~v~~ 154 (288)
||+..+.. ++...++ .+|...|.+++|+|+ + +++++.|+++++|++..+......+.. .+|...|.+
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd--g--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED--V--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT--E--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcCC--c--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 99976531 2344555 568889999999997 4 778889999999999765421112233 478889999
Q ss_pred EEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEe--cCCCCCCCcEEEEEe
Q 036510 155 VSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAW--APNLGLPKSTIASAS 232 (288)
Q Consensus 155 i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~--sp~~~~~~~~l~s~s 232 (288)
++|+ + +.|++++ +++|++||+.++. ......+|.+.|.+|.| +|++ +.|++++
T Consensus 232 vaFs--g--------------~~LASa~-~~tIkLWd~~~~~----~~~~~~gh~~~V~~va~~~s~d~----~~La~a~ 286 (588)
T 2j04_A 232 LKIV--D--------------YKVVLTC-PGYVHKIDLKNYS----ISSLKTGSLENFHIIPLNHEKES----TILLMSN 286 (588)
T ss_dssp EEEE--T--------------TEEEEEC-SSEEEEEETTTTE----EEEEECSCCSCCCEEEETTCSSC----EEEEECS
T ss_pred EEEE--C--------------CEEEEEe-CCeEEEEECCCCe----EEEEEcCCCceEEEEEeeeCCCC----CEEEEEc
Confidence 9998 3 5688876 7999999987753 21122379999999999 9974 6899999
Q ss_pred CCCcEEEEEeec----CCCc-----------ccc--eEee--ccccCeEEEEeecCCCEEEEEeC
Q 036510 233 EDGKVIIWTVAR----EGDQ-----------WEG--KVLH--DFKTPVYRVSWSLTGNILAVADG 278 (288)
Q Consensus 233 ~D~~i~iw~~~~----~~~~-----------~~~--~~~~--~~~~~i~~~~~spdg~~l~s~~~ 278 (288)
.||+ ++|.... +... +.. ..+. +....|++++|||||+.+|+++.
T Consensus 287 edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 287 KTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp SCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEEE
T ss_pred CCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEEe
Confidence 9999 9998631 1000 000 0011 11235899999999999999863
No 112
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=2.3e-30 Score=224.08 Aligned_cols=251 Identities=19% Similarity=0.236 Sum_probs=184.7
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
.+.+|...|.+++|+|++++|++++.|++|++||+... +. ..+.+|...|++++|.+.+++.+|++++.|+.|++||
T Consensus 81 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--~~-~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd 157 (368)
T 3mmy_A 81 AQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN--QA-IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWD 157 (368)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--EE-EEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEEC
T ss_pred EeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC--Cc-eeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEE
Confidence 45689999999999999999999999999999998643 33 3467899999999994223488999999999999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCc
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGA 165 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~ 165 (288)
++++.. ...+..| ..+.++.+.+. .+++++.++.+.+|+++.... ........+...+.++.+.+....
T Consensus 158 ~~~~~~---~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-- 226 (368)
T 3mmy_A 158 TRSSNP---MMVLQLP-ERCYCADVIYP----MAVVATAERGLIVYQLENQPS-EFRRIESPLKHQHRCVAIFKDKQN-- 226 (368)
T ss_dssp SSCSSC---SEEEECS-SCEEEEEEETT----EEEEEEGGGCEEEEECSSSCE-EEEECCCSCSSCEEEEEEEECTTS--
T ss_pred CCCCcE---EEEEecC-CCceEEEecCC----eeEEEeCCCcEEEEEeccccc-hhhhccccccCCCceEEEcccCCC--
Confidence 987653 3345444 46777777653 467788899999999976432 111222223334455554443310
Q ss_pred eecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCc------------ceEEEEecCCCCCCCcEEEEEeC
Q 036510 166 LVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTD------------WVRDVAWAPNLGLPKSTIASASE 233 (288)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~------------~V~~v~~sp~~~~~~~~l~s~s~ 233 (288)
....+++++.|+.|++||+..... ......+.+|.. .|.+++|+|++ .+|++|+.
T Consensus 227 --------~~~~~~~~~~dg~i~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~----~~l~s~~~ 293 (368)
T 3mmy_A 227 --------KPTGFALGSIEGRVAIHYINPPNP-AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH----GTLATVGS 293 (368)
T ss_dssp --------CEEEEEEEETTSEEEEEESSCSCH-HHHSEEEECSEEC----CCCEEECCEEEEEECTTT----CCEEEEET
T ss_pred --------CCCeEEEecCCCcEEEEecCCCCc-cccceeeeeeecccccccccccccceEEEEEecCC----CEEEEEcc
Confidence 013389999999999999976521 022334455554 79999999984 68999999
Q ss_pred CCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 234 DGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 234 D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
|+.|++||+.... ....+..|..+|.+++|+|||++|++|+.|+..+.|+
T Consensus 294 dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 294 DGRFSFWDKDART---KLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp TSCEEEEETTTTE---EEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred CCeEEEEECCCCc---EEEEecCCCCCceEEEECCCCCeEEEEeccccccccc
Confidence 9999999987431 2234456778999999999999999999988655444
No 113
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=2.1e-29 Score=214.43 Aligned_cols=246 Identities=10% Similarity=-0.016 Sum_probs=160.2
Q ss_pred EEEEeeCCCcEEEEEeCCC-CceeeEEEeccccCeEEEEecCC-----------------------CC----CCEEEEee
Q 036510 25 RLATASSDYSIKIIGVGNN-TSQHLAKLSGHKGAVWEVAWAHP-----------------------KF----GSILASCS 76 (288)
Q Consensus 25 ~l~s~~~d~~i~lwd~~~~-~~~~~~~~~~h~~~v~~~~~~~~-----------------------~~----~~~l~s~s 76 (288)
-+++++. .+|+||+.... ..+.++++.+|..+|..+.++++ ++ ++++++++
T Consensus 56 ~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g 134 (356)
T 2w18_A 56 CIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSG 134 (356)
T ss_dssp EEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEE
T ss_pred EEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCC
Confidence 4666665 48999998543 23678888888877666655541 13 45666654
Q ss_pred C--------------------CCcEEEeecCCCCceEEeEEeecCCCceeEEEecc-CCCCeEEEEEeCCCcEEEEeecC
Q 036510 77 F--------------------DGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP-HELGLCLACGSSDGNISVFTARA 135 (288)
Q Consensus 77 ~--------------------d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p-~~~~~~l~sg~~d~~i~i~d~~~ 135 (288)
. |+.|++|++..... ....+.+|...+..++|+| ++.+.++++|+.|++|+|||+++
T Consensus 135 ~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~--~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~T 212 (356)
T 2w18_A 135 NIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGG--GKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKT 212 (356)
T ss_dssp EEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSC--EEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTT
T ss_pred CeEEEEecCCCcEEEecccCCCCcEEEEEECCCCc--eeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCC
Confidence 3 88899998854332 2334567888899999988 44478899999999999999988
Q ss_pred CCCeeeEEeeccC---CCCeeEEEeCCCCCCCceecccccC-CCceeEEeecCCcEEEEEEeCCceeeeeeec-cccCCc
Q 036510 136 DGGWDTSRIDQAH---PVGVTSVSWAPSTAPGALVGSGFLD-PVQKLCSGGCDNTVKVWKLYNGIWKMDCFPA-LQMHTD 210 (288)
Q Consensus 136 ~~~~~~~~~~~~~---~~~v~~i~~~p~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~h~~ 210 (288)
+.... .+++| ...+.++.|+|++.. +.....+ ....+++|+.|++|++||..++......... ..+|..
T Consensus 213 Gk~l~---tL~g~~~~v~~v~~vafSpdG~~---lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~ 286 (356)
T 2w18_A 213 GQLLK---KMHIDDSYQASVCHKAYSEMGLL---FIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAG 286 (356)
T ss_dssp CCEEE---EEECCC---CCCEEEEEEETTEE---EEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCC
T ss_pred CcEEE---EEcCCCcceeeeEEEEECCCCCE---EEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcc
Confidence 75433 23333 346778899998621 1000000 1124689999999999998876321111111 147766
Q ss_pred ceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCe-EEEEeecCCCEEEEEeCCCcEEEeEcC
Q 036510 211 WVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPV-YRVSWSLTGNILAVADGNNNVTLWEEA 288 (288)
Q Consensus 211 ~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i-~~~~~spdg~~l~s~~~d~~v~~w~~~ 288 (288)
.+.+..++ +.++|+|+.|++|+|||++..+ ....+.+|...+ .+++|||||++|++|+.|++|||||..
T Consensus 287 ~~lsg~~s------g~~lASgS~DgTIkIWDl~tGk---~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 287 RFLEGDVK------DHCAAAILTSGTIAIWDLLLGQ---CTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp CEEEEEEE------TTEEEEEETTSCEEEEETTTCS---EEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred eeEccccC------CCEEEEEcCCCcEEEEECCCCc---EEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 65555554 2479999999999999997542 123445565544 468999999999999999999999963
No 114
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=5e-29 Score=213.44 Aligned_cols=224 Identities=21% Similarity=0.354 Sum_probs=175.5
Q ss_pred ccccccceEEEEEcC--CCCEEEEeeCCCcEEEEEeCCCCc-------eeeEEEeccccCeEEEEecCCCCCCEEEEeeC
Q 036510 7 ETGHEDTVHDVAMDY--YGKRLATASSDYSIKIIGVGNNTS-------QHLAKLSGHKGAVWEVAWAHPKFGSILASCSF 77 (288)
Q Consensus 7 ~~~h~~~v~~~~~s~--~g~~l~s~~~d~~i~lwd~~~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~ 77 (288)
+.+|...|.+++|+| ++++|++|+.|++|++||+..+.. +.+..+.+|...|.+++|+++..+.+|++++.
T Consensus 53 ~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 132 (351)
T 3f3f_A 53 WRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN 132 (351)
T ss_dssp EECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred eccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC
Confidence 458999999999999 699999999999999999964321 45778889999999999986422789999999
Q ss_pred CCcEEEeecCCCCce---EEeEE-------eecCCCceeEEEeccCC-CCeEEEEEeCCCcEEEEeecCCCCeeeEEeec
Q 036510 78 DGTVIIWKEGNSNEW---IKDHV-------FEDHKSSVNSIDWAPHE-LGLCLACGSSDGNISVFTARADGGWDTSRIDQ 146 (288)
Q Consensus 78 d~~v~iwd~~~~~~~---~~~~~-------~~~h~~~v~~l~~~p~~-~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~ 146 (288)
|+.|++||+++.... ..... ...|...+.+++|+|+. .+.++++++.|+.+.+|+...+ .........
T Consensus 133 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~ 211 (351)
T 3f3f_A 133 DGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDG-KLHVAAKLP 211 (351)
T ss_dssp TCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTS-CEEEEEECC
T ss_pred CCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCC-ceeeeeecC
Confidence 999999998765421 10000 11578899999999972 2567899999999966665443 334445667
Q ss_pred cCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCce-----------------------------
Q 036510 147 AHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIW----------------------------- 197 (288)
Q Consensus 147 ~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~----------------------------- 197 (288)
+|...|.++.|+|++... .++|++++.|+.|++||++.+..
T Consensus 212 ~h~~~i~~~~~~p~~~~~----------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (351)
T 3f3f_A 212 GHKSLIRSISWAPSIGRW----------YQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSD 281 (351)
T ss_dssp CCCSCEEEEEECCCSSCS----------SEEEEEEETTSCEEEEEEEECC------------------------------
T ss_pred CCCcceeEEEECCCCCCc----------ceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccc
Confidence 899999999999986210 15799999999999999986411
Q ss_pred -------------eeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecC
Q 036510 198 -------------KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245 (288)
Q Consensus 198 -------------~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~ 245 (288)
..+.+..+.+|...|.+++|+|++ .+|++|+.|+.|++|+++..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~----~~l~s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 282 SNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTG----TILSSAGDDGKVRLWKATYS 338 (351)
T ss_dssp ---------CCSEEEEEEEEECTTSSCEEEEEECSSS----CCEEEEETTSCEEEEEECTT
T ss_pred cccceeeeecccccccEEEEEecccccEEEEEEcCCC----CEEEEecCCCcEEEEecCcC
Confidence 124556678899999999999984 68999999999999999854
No 115
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=3e-29 Score=220.20 Aligned_cols=248 Identities=17% Similarity=0.253 Sum_probs=165.3
Q ss_pred cccccceEEEEEcC-CCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCC-CCCEEEEeeCCCcEEEee
Q 036510 8 TGHEDTVHDVAMDY-YGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK-FGSILASCSFDGTVIIWK 85 (288)
Q Consensus 8 ~~h~~~v~~~~~s~-~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~l~s~s~d~~v~iwd 85 (288)
.+|...|.+++|+| ++++|++++.|++|++||+... +.+..+. |...+..+.|.+.. ++.++++++.|+.|++||
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 172 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL--QTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCD 172 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT--EEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEE
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC--ccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEe
Confidence 36999999999999 7789999999999999998643 4455544 77889999998642 456999999999999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCe-eeE------------EeeccCCCCe
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGW-DTS------------RIDQAHPVGV 152 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~-~~~------------~~~~~~~~~v 152 (288)
+.++. ....+..|...|.+++|+|++ ..++++|+.|+.|++||++..... ... .....|...|
T Consensus 173 ~~~~~---~~~~~~~~~~~v~~~~~~~~~-~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 248 (408)
T 4a11_B 173 LKSGS---CSHILQGHRQEILAVSWSPRY-DYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKV 248 (408)
T ss_dssp SSSSC---CCEEECCCCSCEEEEEECSSC-TTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCE
T ss_pred CCCcc---eeeeecCCCCcEEEEEECCCC-CcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCce
Confidence 98765 345677899999999999984 336889999999999999865321 110 0114678889
Q ss_pred eEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCcee----------------------------------
Q 036510 153 TSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWK---------------------------------- 198 (288)
Q Consensus 153 ~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~---------------------------------- 198 (288)
.++.|+|++ .+|++++.|+.|++||+.++...
T Consensus 249 ~~~~~~~~~--------------~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (408)
T 4a11_B 249 NGLCFTSDG--------------LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGS 314 (408)
T ss_dssp EEEEECTTS--------------SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETT
T ss_pred eEEEEcCCC--------------CEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCC
Confidence 999999987 55666666666666666443110
Q ss_pred ---------eeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeec-
Q 036510 199 ---------MDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSL- 268 (288)
Q Consensus 199 ---------~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~sp- 268 (288)
.+++..+.+|...|.+++|+|++ .+|++|+.|+.|++|+++..+. +...........++|
T Consensus 315 ~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~----~~l~s~~~dg~i~iw~~~~~~~------~~~~~~~~~~~~~~~~ 384 (408)
T 4a11_B 315 TIAVYTVYSGEQITMLKGHYKTVDCCVFQSNF----QELYSGSRDCNILAWVPSLYEP------VPDDDETTTKSQLNPA 384 (408)
T ss_dssp EEEEEETTTCCEEEEECCCSSCEEEEEEETTT----TEEEEEETTSCEEEEEECC-------------------------
T ss_pred EEEEEECcCCcceeeeccCCCeEEEEEEcCCC----CEEEEECCCCeEEEEeCCCCCc------cCCCCceEeccccccc
Confidence 13445667899999999999984 7899999999999999976421 111111122234444
Q ss_pred CCCEEEEEeCCCcEEEeE
Q 036510 269 TGNILAVADGNNNVTLWE 286 (288)
Q Consensus 269 dg~~l~s~~~d~~v~~w~ 286 (288)
+...+.+.+.|+.+++|+
T Consensus 385 ~~~~~~~~~~~~~~~~W~ 402 (408)
T 4a11_B 385 FEDAWSSSDEEGGTSAWS 402 (408)
T ss_dssp ------------------
T ss_pred cceeecccCccCceeecC
Confidence 344566777899999997
No 116
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-29 Score=219.53 Aligned_cols=238 Identities=12% Similarity=0.074 Sum_probs=172.7
Q ss_pred cceEEEEEcCCCCEEEEeeCCCcEEEEEeCCC-------CceeeEEEe-ccccCeEEEEecCCCCCCEEEEeeCCCcEEE
Q 036510 12 DTVHDVAMDYYGKRLATASSDYSIKIIGVGNN-------TSQHLAKLS-GHKGAVWEVAWAHPKFGSILASCSFDGTVII 83 (288)
Q Consensus 12 ~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~-------~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~i 83 (288)
..|.++.|+|+ +++++.|+++++|+.... ..+.+..+. +|.+.|.+++|++..++++|++++.|++|++
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~ 153 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGF 153 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEE
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEE
Confidence 44555666766 999999999999976421 223233433 6778999999986224899999999999999
Q ss_pred eecCCCCceEEeEEe-ecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeecc-CCCCeeEEEeCCCC
Q 036510 84 WKEGNSNEWIKDHVF-EDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQA-HPVGVTSVSWAPST 161 (288)
Q Consensus 84 wd~~~~~~~~~~~~~-~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~v~~i~~~p~~ 161 (288)
||+.++.. .... ..|...|.+++|+|+ +.++++|+.|+.|++||++++... ....+. |...|.++.|+|++
T Consensus 154 wd~~~~~~---~~~~~~~~~~~i~~~~~~pd--g~~lasg~~dg~i~iwd~~~~~~~--~~~~~~~h~~~v~~l~fs~~g 226 (343)
T 3lrv_A 154 QSYEDDSQ---YIVHSAKSDVEYSSGVLHKD--SLLLALYSPDGILDVYNLSSPDQA--SSRFPVDEEAKIKEVKFADNG 226 (343)
T ss_dssp EESSSSCE---EEEECCCSSCCCCEEEECTT--SCEEEEECTTSCEEEEESSCTTSC--CEECCCCTTSCEEEEEECTTS
T ss_pred EECCCCcE---EEEEecCCCCceEEEEECCC--CCEEEEEcCCCEEEEEECCCCCCC--ccEEeccCCCCEEEEEEeCCC
Confidence 99987653 2223 345568999999998 678999999999999999876542 122344 89999999999987
Q ss_pred CCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceE--EEEecCCCCCCCcEEEEEeC-CCcEE
Q 036510 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVR--DVAWAPNLGLPKSTIASASE-DGKVI 238 (288)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~--~v~~sp~~~~~~~~l~s~s~-D~~i~ 238 (288)
.+|++++ |+.|++||++++... ..+..+..|...+. +++|+|++ .+|++++. |+.|+
T Consensus 227 --------------~~l~s~~-~~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g----~~l~~~s~~d~~i~ 286 (343)
T 3lrv_A 227 --------------YWMVVEC-DQTVVCFDLRKDVGT-LAYPTYTIPEFKTGTVTYDIDDSG----KNMIAYSNESNSLT 286 (343)
T ss_dssp --------------SEEEEEE-SSBEEEEETTSSTTC-BSSCCCBC-----CCEEEEECTTS----SEEEEEETTTTEEE
T ss_pred --------------CEEEEEe-CCeEEEEEcCCCCcc-eeecccccccccccceEEEECCCC----CEEEEecCCCCcEE
Confidence 7889988 559999999875311 11222223444444 69999984 78999998 99999
Q ss_pred EEEeecCCCcccceEeeccccCeEEEEeec---CCCEEEEEeCCCcEEEeE
Q 036510 239 IWTVAREGDQWEGKVLHDFKTPVYRVSWSL---TGNILAVADGNNNVTLWE 286 (288)
Q Consensus 239 iw~~~~~~~~~~~~~~~~~~~~i~~~~~sp---dg~~l~s~~~d~~v~~w~ 286 (288)
+|+.......+.. .++..++|+| +++.+++++.|++++++-
T Consensus 287 v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 287 IYKFDKKTKNWTK-------DEESALCLQSDTADFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp EEEECTTTCSEEE-------EEEEECCC----CCCCEEEEEEETTEEEEEE
T ss_pred EEEEcccccceEe-------cCceeEecCccccccceeEEEecCCceEEEE
Confidence 9998654322221 4677899999 999999999999998873
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.2e-30 Score=242.20 Aligned_cols=223 Identities=24% Similarity=0.309 Sum_probs=180.3
Q ss_pred cccccccceEEEEEcCC--CCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEE
Q 036510 6 IETGHEDTVHDVAMDYY--GKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~--g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~i 83 (288)
.+.+|.+.|.+++|+++ +++|++|+.|++|++||+..+....+..+.+|...|++++|+++..+.+|++++.||+|++
T Consensus 48 ~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~v 127 (753)
T 3jro_A 48 TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV 127 (753)
T ss_dssp EECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred eccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEE
Confidence 45689999999999988 9999999999999999997654446788899999999999986433789999999999999
Q ss_pred eecCCCCceEEeEEeecCCCceeEEEeccCC-----------CCeEEEEEeCCCcEEEEeecCCCCe-eeEEeeccCCCC
Q 036510 84 WKEGNSNEWIKDHVFEDHKSSVNSIDWAPHE-----------LGLCLACGSSDGNISVFTARADGGW-DTSRIDQAHPVG 151 (288)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~-----------~~~~l~sg~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~ 151 (288)
||+...... ....+..|...|.+++|+|.. .+.++++|+.||.|++||++.+... .......+|...
T Consensus 128 wdl~~~~~~-~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~ 206 (753)
T 3jro_A 128 VEFKENGTT-SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW 206 (753)
T ss_dssp EECCSSSCC-CCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred EEeecCCCc-ceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc
Confidence 999765332 234567899999999999941 2567999999999999999876432 333456789999
Q ss_pred eeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCcee-eeeeeccccCCcceEEEEecCCCCCCCcEEEE
Q 036510 152 VTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWK-MDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230 (288)
Q Consensus 152 v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s 230 (288)
|.++.|+|+... +.+|++++.|+.|++||+.++... .........|...|.+++|+|++ .+|++
T Consensus 207 V~~l~~sp~~~~-----------~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg----~~l~s 271 (753)
T 3jro_A 207 VRDVAWSPTVLL-----------RSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG----NVLAL 271 (753)
T ss_dssp EEEEEECCCCSS-----------SEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTT----CCEEE
T ss_pred EEEEEeccCCCC-----------CCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCC----CEEEE
Confidence 999999998200 178999999999999999875211 11233445688899999999984 68999
Q ss_pred EeCCCcEEEEEeec
Q 036510 231 ASEDGKVIIWTVAR 244 (288)
Q Consensus 231 ~s~D~~i~iw~~~~ 244 (288)
|+.|+.|++|++..
T Consensus 272 ~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 272 SGGDNKVTLWKENL 285 (753)
T ss_dssp ECSSSCEECCBCCS
T ss_pred EcCCCEEEEEecCC
Confidence 99999999999873
No 118
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=2.4e-29 Score=224.41 Aligned_cols=219 Identities=25% Similarity=0.381 Sum_probs=176.9
Q ss_pred cccccccceEEEEEcCCCC-EEEEeeCCCcEEEEEeCCCCc-----eeeEEEeccccCeEEEEecCCCCCCEEEEeeCCC
Q 036510 6 IETGHEDTVHDVAMDYYGK-RLATASSDYSIKIIGVGNNTS-----QHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDG 79 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~-~l~s~~~d~~i~lwd~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~ 79 (288)
.+.+|...|.+++|+|+++ +|++|+.|++|++|++..... .....+.+|...|.+++|++. ++.+|++++.|+
T Consensus 176 ~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~~l~s~~~dg 254 (430)
T 2xyi_A 176 RLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLL-HESLFGSVADDQ 254 (430)
T ss_dssp EEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSS-CTTEEEEEETTS
T ss_pred EecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCC-CCCEEEEEeCCC
Confidence 4458999999999999988 999999999999999864211 124667799999999999863 478999999999
Q ss_pred cEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCC
Q 036510 80 TVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP 159 (288)
Q Consensus 80 ~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p 159 (288)
.|++||++..........+..|...|++++|+|++ ..++++|+.||.|++||++.... .......|...|.++.|+|
T Consensus 255 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~-~~~l~tg~~dg~v~vwd~~~~~~--~~~~~~~h~~~v~~i~~sp 331 (430)
T 2xyi_A 255 KLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVQWSP 331 (430)
T ss_dssp EEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSC-TTEEEEEETTSEEEEEETTCTTS--CSEEEECCSSCEEEEEECS
T ss_pred eEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCC-CCEEEEEeCCCeEEEEeCCCCCC--CeEEeecCCCCEEEEEECC
Confidence 99999998753222344566899999999999974 34789999999999999987432 2344557889999999999
Q ss_pred CCCCCceecccccCCCceeEEeecCCcEEEEEEeCCcee----------eeeeeccccCCcceEEEEecCCCCCCCcEEE
Q 036510 160 STAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWK----------MDCFPALQMHTDWVRDVAWAPNLGLPKSTIA 229 (288)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~----------~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~ 229 (288)
++. .+|++++.|+.|+|||+...... .+.+..+.+|...|++++|+|+. ..+|+
T Consensus 332 ~~~-------------~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~---~~~l~ 395 (430)
T 2xyi_A 332 HNE-------------TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE---PWIIC 395 (430)
T ss_dssp SCT-------------TEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSS---TTEEE
T ss_pred CCC-------------CEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCC---CCEEE
Confidence 873 57999999999999999762110 13455667899999999999985 23899
Q ss_pred EEeCCCcEEEEEeec
Q 036510 230 SASEDGKVIIWTVAR 244 (288)
Q Consensus 230 s~s~D~~i~iw~~~~ 244 (288)
+++.|+.|++|++..
T Consensus 396 s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 396 SVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEETTSEEEEEEECH
T ss_pred EEECCCCEEEeEccc
Confidence 999999999999874
No 119
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.5e-28 Score=209.75 Aligned_cols=211 Identities=18% Similarity=0.255 Sum_probs=171.7
Q ss_pred eeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC
Q 036510 46 QHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125 (288)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d 125 (288)
.....+.+|...|++++|+++ +.+|++++.|+.|++||+.++. ....+..|...|.+++|+|+ +.++++++.|
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~--~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d 95 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKE--GDLLFSCSKDSSASVWYSLNGE---RLGTLDGHTGTIWSIDVDCF--TKYCVTGSAD 95 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTT--SCEEEEEESSSCEEEEETTTCC---EEEEECCCSSCEEEEEECTT--SSEEEEEETT
T ss_pred cccEEEEEeeceEEEEEEcCC--CCEEEEEeCCCEEEEEeCCCch---hhhhhhhcCCcEEEEEEcCC--CCEEEEEeCC
Confidence 345678999999999999864 8899999999999999997765 45667889999999999997 6789999999
Q ss_pred CcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecC-----CcEEEEEEeCCceee-
Q 036510 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD-----NTVKVWKLYNGIWKM- 199 (288)
Q Consensus 126 ~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~- 199 (288)
+.|++||++++..... .. +...+.++.|+|++ .++++++.+ +.|++||+..+....
T Consensus 96 g~i~iwd~~~~~~~~~---~~-~~~~v~~~~~~~~~--------------~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~ 157 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVAT---WK-SPVPVKRVEFSPCG--------------NYFLAILDNVMKNPGSINIYEIERDSATHE 157 (369)
T ss_dssp TEEEEEETTTCCEEEE---EE-CSSCEEEEEECTTS--------------SEEEEEECCBTTBCCEEEEEEEEECTTTCC
T ss_pred CeEEEEECCCCcEEEE---ee-cCCCeEEEEEccCC--------------CEEEEecCCccCCCCEEEEEEecCCcccee
Confidence 9999999987643222 22 77889999999987 778888888 999999997652110
Q ss_pred ------eeeeccccCCc--ceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCC
Q 036510 200 ------DCFPALQMHTD--WVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGN 271 (288)
Q Consensus 200 ------~~~~~~~~h~~--~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~ 271 (288)
.....+..|.. .+.+++|+|+. .+|++++.|+.|++||+..... ....+..+...|.+++|+|+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~ 231 (369)
T 3zwl_B 158 LTKVSEEPIHKIITHEGLDAATVAGWSTKG----KYIIAGHKDGKISKYDVSNNYE--YVDSIDLHEKSISDMQFSPDLT 231 (369)
T ss_dssp EEEECSSCSEEEECCTTCCCEEEEEECGGG----CEEEEEETTSEEEEEETTTTTE--EEEEEECCSSCEEEEEECTTSS
T ss_pred ecccccceeeeccCCcCccceeEEEEcCCC----CEEEEEcCCCEEEEEECCCCcE--eEEEEecCCCceeEEEECCCCC
Confidence 12223445655 89999999974 6899999999999999875321 2344556778999999999999
Q ss_pred EEEEEeCCCcEEEeEc
Q 036510 272 ILAVADGNNNVTLWEE 287 (288)
Q Consensus 272 ~l~s~~~d~~v~~w~~ 287 (288)
+|++++.|+.|++||+
T Consensus 232 ~l~~~~~d~~i~v~d~ 247 (369)
T 3zwl_B 232 YFITSSRDTNSFLVDV 247 (369)
T ss_dssp EEEEEETTSEEEEEET
T ss_pred EEEEecCCceEEEEEC
Confidence 9999999999999995
No 120
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=3.4e-29 Score=213.18 Aligned_cols=202 Identities=12% Similarity=0.137 Sum_probs=142.9
Q ss_pred ccceEEEEEcCC----CCEEEEee--------------------CCCcEEEEEeCCCCceeeEEEeccccCeEEEEecC-
Q 036510 11 EDTVHDVAMDYY----GKRLATAS--------------------SDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH- 65 (288)
Q Consensus 11 ~~~v~~~~~s~~----g~~l~s~~--------------------~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~- 65 (288)
...|..++|+|+ ++++++++ .|+.|++|++. +.++.+..+.+|...+..++|++
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s-~dG~~~~s~~~~~~~v~~l~fs~~ 189 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFA-EDGGGKENQFLMPPEETILTFAEV 189 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEEC-TTSCEEEEEEECCCSSCEEEEEEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEEC-CCCceeeeeccCCCceeeEEeecc
Confidence 346666667777 66666655 38999999984 34567788889999999999987
Q ss_pred CCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCC---CceeEEEeccCCCCeEE------------EEEeCCCcEEE
Q 036510 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHK---SSVNSIDWAPHELGLCL------------ACGSSDGNISV 130 (288)
Q Consensus 66 ~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~---~~v~~l~~~p~~~~~~l------------~sg~~d~~i~i 130 (288)
+.++++|+|+|.|++|+|||+.++. ..+++.+|. ..+.+++|+|+ +.++ ++|+.|++|++
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk---~l~tL~g~~~~v~~v~~vafSpd--G~~lvs~s~~~~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQ---LLKKMHIDDSYQASVCHKAYSEM--GLLFIVLSHPCAKESESLRSPVFQLIV 264 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCC---EEEEEECCC---CCCEEEEEEET--TEEEEEEC------------CCEEEEE
T ss_pred CCCCceEEEecCCCcEEEEECCCCc---EEEEEcCCCcceeeeEEEEECCC--CCEEEEeccCCCcceeeccCCCcEEEE
Confidence 4568999999999999999998876 445666543 36777899997 4443 67899999999
Q ss_pred EeecCCCCeeeEE--eeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccC
Q 036510 131 FTARADGGWDTSR--IDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMH 208 (288)
Q Consensus 131 ~d~~~~~~~~~~~--~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h 208 (288)
||..++....... ...+|...+.+..++ +.++++++.|++|||||+.++ +++.++.+|
T Consensus 265 Wd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s----------------g~~lASgS~DgTIkIWDl~tG----k~l~tL~gH 324 (356)
T 2w18_A 265 INPKTTLSVGVMLYCLPPGQAGRFLEGDVK----------------DHCAAAILTSGTIAIWDLLLG----QCTALLPPV 324 (356)
T ss_dssp EETTTTEEEEEEEECCCTTCCCCEEEEEEE----------------TTEEEEEETTSCEEEEETTTC----SEEEEECCC
T ss_pred EECCCCEEEEEEEeeccCCCcceeEccccC----------------CCEEEEEcCCCcEEEEECCCC----cEEEEecCC
Confidence 9987653221110 012443333222222 257899999999999999887 567788889
Q ss_pred CcceE-EEEecCCCCCCCcEEEEEeCCCcEEEEEe
Q 036510 209 TDWVR-DVAWAPNLGLPKSTIASASEDGKVIIWTV 242 (288)
Q Consensus 209 ~~~V~-~v~~sp~~~~~~~~l~s~s~D~~i~iw~~ 242 (288)
.+.+. +++|+|++ ++|+||+.|++|||||+
T Consensus 325 ~~~vvs~vafSPDG----~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 325 SDQHWSFVKWSGTD----SHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp --CCCCEEEECSSS----SEEEEECTTSCEEEEEE
T ss_pred CCCeEEEEEECCCC----CEEEEEECCCcEEEecC
Confidence 87655 68999984 78999999999999985
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1.4e-26 Score=205.77 Aligned_cols=242 Identities=9% Similarity=0.071 Sum_probs=183.7
Q ss_pred ccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEE-EEeeCCCcEEEee
Q 036510 7 ETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSIL-ASCSFDGTVIIWK 85 (288)
Q Consensus 7 ~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l-~s~s~d~~v~iwd 85 (288)
+.+|...|.+++|+++|+++++++.|++|++||+.. .+.+..+..|...+.+++|+++ +..+ ++++.|+.|++||
T Consensus 165 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~i~~~d 240 (433)
T 3bws_A 165 YKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT--LAYKATVDLTGKWSKILLYDPI--RDLVYCSNWISEDISVID 240 (433)
T ss_dssp HHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT--CCEEEEEECSSSSEEEEEEETT--TTEEEEEETTTTEEEEEE
T ss_pred ccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC--ceEEEEEcCCCCCeeEEEEcCC--CCEEEEEecCCCcEEEEE
Confidence 347889999999999999999999999999999854 3567788889999999999865 5655 5666899999999
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEe--------CCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEe
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS--------SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSW 157 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~--------~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~ 157 (288)
++++. ....+.. ...+.+++|+|+ +..+++++ .|+.|++||++.+.... ...|...+..+.|
T Consensus 241 ~~~~~---~~~~~~~-~~~~~~~~~~~~--g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~----~~~~~~~~~~~~~ 310 (433)
T 3bws_A 241 RKTKL---EIRKTDK-IGLPRGLLLSKD--GKELYIAQFSASNQESGGGRLGIYSMDKEKLID----TIGPPGNKRHIVS 310 (433)
T ss_dssp TTTTE---EEEECCC-CSEEEEEEECTT--SSEEEEEEEESCTTCSCCEEEEEEETTTTEEEE----EEEEEECEEEEEE
T ss_pred CCCCc---EEEEecC-CCCceEEEEcCC--CCEEEEEECCCCccccCCCeEEEEECCCCcEEe----eccCCCCcceEEE
Confidence 97654 3334443 356899999998 45566665 48899999998653211 1234457889999
Q ss_pred CCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeC----
Q 036510 158 APSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASE---- 233 (288)
Q Consensus 158 ~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~---- 233 (288)
+|++. .++++++.|+.|++||+.++. ....+. +...+.+++|+|++ ++|++++.
T Consensus 311 ~~~g~-------------~l~~~~~~~~~v~v~d~~~~~----~~~~~~-~~~~~~~~~~s~dg----~~l~~~~~~~~~ 368 (433)
T 3bws_A 311 GNTEN-------------KIYVSDMCCSKIEVYDLKEKK----VQKSIP-VFDKPNTIALSPDG----KYLYVSCRGPNH 368 (433)
T ss_dssp CSSTT-------------EEEEEETTTTEEEEEETTTTE----EEEEEE-CSSSEEEEEECTTS----SEEEEEECCCCC
T ss_pred CCCCC-------------EEEEEecCCCEEEEEECCCCc----EEEEec-CCCCCCeEEEcCCC----CEEEEEecCCCc
Confidence 99872 456788999999999998752 233333 56678999999984 56777665
Q ss_pred -----------CCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeC-CCcEEEeEcC
Q 036510 234 -----------DGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADG-NNNVTLWEEA 288 (288)
Q Consensus 234 -----------D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~-d~~v~~w~~~ 288 (288)
|+.|++||+.... ....+. ....+.+++|+|||++|++++. |++|++|++.
T Consensus 369 ~~~~~~~~g~~dg~v~~~d~~~~~---~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 369 PTEGYLKKGLVLGKVYVIDTTTDT---VKEFWE-AGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp TTTCTTSCCSSCCEEEEEETTTTE---EEEEEE-CSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred cccccccccccceEEEEEECCCCc---EEEEec-CCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 5799999986431 112222 2457899999999999998875 9999999963
No 122
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=6.9e-28 Score=212.59 Aligned_cols=221 Identities=13% Similarity=0.091 Sum_probs=151.2
Q ss_pred ccccccccceEEEEEcC--------CCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEee
Q 036510 5 KIETGHEDTVHDVAMDY--------YGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCS 76 (288)
Q Consensus 5 ~~~~~h~~~v~~~~~s~--------~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s 76 (288)
..+.||++.|++++|+| ||++|||||.|++|+|||+... ..+..+.+|...|.+++|+|+ ++.+|++++
T Consensus 130 ~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~--~~~~~~~~~~~~v~~v~~~p~-~~~~l~~~~ 206 (393)
T 4gq1_A 130 GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE--GPILAGYPLSSPGISVQFRPS-NPNQLIVGE 206 (393)
T ss_dssp CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT--EEEEEEEECSSCEEEEEEETT-EEEEEEEEE
T ss_pred cccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC--ceeeeecCCCCCcEEEEECCC-CCceEEecC
Confidence 34679999999999997 7899999999999999998543 556777889999999999864 346899999
Q ss_pred CCCcEEEeecCCCCceEE----------------------eEEeecCCCceeEEEec-cCCCCeEEEEEeCCCcEEEEee
Q 036510 77 FDGTVIIWKEGNSNEWIK----------------------DHVFEDHKSSVNSIDWA-PHELGLCLACGSSDGNISVFTA 133 (288)
Q Consensus 77 ~d~~v~iwd~~~~~~~~~----------------------~~~~~~h~~~v~~l~~~-p~~~~~~l~sg~~d~~i~i~d~ 133 (288)
.|++|++||++.+..... .....+|...+.++.|+ |+ +..+++++.|+++++||+
T Consensus 207 ~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~d--g~~l~s~s~d~~i~vwd~ 284 (393)
T 4gq1_A 207 RNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSD--GSGILAMCKSGAWLRWNL 284 (393)
T ss_dssp TTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTT--TCEEEEECTTSEEEEEEC
T ss_pred CCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCC--CCEEEEEeCCCCEEEEEC
Confidence 999999999876432100 01123688889999997 44 678999999999999999
Q ss_pred cCCCCeeeEEeeccCCCCeeEEEeCCCCCCCc----eeccccc--CCCceeEEeecCCcEEEEEEeCCceeeeeeecccc
Q 036510 134 RADGGWDTSRIDQAHPVGVTSVSWAPSTAPGA----LVGSGFL--DPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQM 207 (288)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~----~~~~~~~--~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 207 (288)
+..... .....|...+..+.+.|+..... .....+. .+..++++|+.|++|+|||+.++. +...+.+
T Consensus 285 ~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~----~~~~~~~ 357 (393)
T 4gq1_A 285 FANNDY---NEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKD----SNSIPIQ 357 (393)
T ss_dssp ----------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTT----CCEEEEE
T ss_pred ccCCCC---ceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCc----EEEEecC
Confidence 764321 22234555566666666532110 0111111 123467788999999999998763 3344567
Q ss_pred CCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEe
Q 036510 208 HTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV 242 (288)
Q Consensus 208 h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~ 242 (288)
|..+|++|+|+|++ ++||+++.|+ +.+|.+
T Consensus 358 ~~~~V~svafspdG----~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 358 LGMPIVDFCWHQDG----SHLAIATEGS-VLLTRL 387 (393)
T ss_dssp CSSCEEEEEECTTS----SEEEEEESSE-EEEEEE
T ss_pred CCCcEEEEEEcCCC----CEEEEEeCCC-eEEEEE
Confidence 88899999999984 7899998766 666655
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=3.1e-25 Score=194.42 Aligned_cols=238 Identities=9% Similarity=0.050 Sum_probs=175.1
Q ss_pred ccccceEEEEEcCCCCEE-EEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEE-EEeeCCCcEEEeec
Q 036510 9 GHEDTVHDVAMDYYGKRL-ATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSIL-ASCSFDGTVIIWKE 86 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l-~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l-~s~s~d~~v~iwd~ 86 (288)
+| ..+.+++|+|+|++| ++++.|++|++||... ++.+..+..|. .+.+++|+++ +++| ++++.|+.|++||+
T Consensus 30 ~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~--~~~~~~~~~~~-~v~~~~~spd--g~~l~~~~~~~~~v~v~d~ 103 (391)
T 1l0q_A 30 VG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTAT--NNVIATVPAGS-SPQGVAVSPD--GKQVYVTNMASSTLSVIDT 103 (391)
T ss_dssp CS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTT--TEEEEEEECSS-SEEEEEECTT--SSEEEEEETTTTEEEEEET
T ss_pred cC-CCcceEEECCCCCEEEEECCCCCeEEEEECCC--CeEEEEEECCC-CccceEECCC--CCEEEEEECCCCEEEEEEC
Confidence 44 457899999999876 6777999999999853 46666776655 8999999865 6655 56667899999999
Q ss_pred CCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCce
Q 036510 87 GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL 166 (288)
Q Consensus 87 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~ 166 (288)
.++. ....+.. ...+.+++|+|++ ..++++++.++.|++||++.+.. ......+ ..+..+.|+|++.
T Consensus 104 ~~~~---~~~~~~~-~~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~~~~---~~~~~~~-~~~~~~~~~~dg~---- 170 (391)
T 1l0q_A 104 TSNT---VAGTVKT-GKSPLGLALSPDG-KKLYVTNNGDKTVSVINTVTKAV---INTVSVG-RSPKGIAVTPDGT---- 170 (391)
T ss_dssp TTTE---EEEEEEC-SSSEEEEEECTTS-SEEEEEETTTTEEEEEETTTTEE---EEEEECC-SSEEEEEECTTSS----
T ss_pred CCCe---EEEEEeC-CCCcceEEECCCC-CEEEEEeCCCCEEEEEECCCCcE---EEEEecC-CCcceEEECCCCC----
Confidence 7654 2334443 4578999999984 34457888899999999976532 2222233 4578999999872
Q ss_pred ecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEe---CCCcEEEEEee
Q 036510 167 VGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASAS---EDGKVIIWTVA 243 (288)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s---~D~~i~iw~~~ 243 (288)
.++++++.|+.|++||++++. +...+. +...+.++.|+|++ .+|++++ .|+.|++||+.
T Consensus 171 ---------~l~~~~~~~~~v~~~d~~~~~----~~~~~~-~~~~~~~~~~~~~g----~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 171 ---------KVYVANFDSMSISVIDTVTNS----VIDTVK-VEAAPSGIAVNPEG----TKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp ---------EEEEEETTTTEEEEEETTTTE----EEEEEE-CSSEEEEEEECTTS----SEEEEEEECSSCCEEEEEETT
T ss_pred ---------EEEEEeCCCCEEEEEECCCCe----EEEEEe-cCCCccceEECCCC----CEEEEEecCcCCCcEEEEECC
Confidence 334788889999999998763 222322 45678999999984 5677776 68999999986
Q ss_pred cCCCcccceEeeccccCeEEEEeecCCCEE-EEEeCCCcEEEeEc
Q 036510 244 REGDQWEGKVLHDFKTPVYRVSWSLTGNIL-AVADGNNNVTLWEE 287 (288)
Q Consensus 244 ~~~~~~~~~~~~~~~~~i~~~~~spdg~~l-~s~~~d~~v~~w~~ 287 (288)
..+ ....+.. ...+.+++|+|||++| ++++.|+.|++||.
T Consensus 233 ~~~---~~~~~~~-~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 233 TNK---ITARIPV-GPDPAGIAVTPDGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp TTE---EEEEEEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred CCe---EEEEEec-CCCccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence 431 1122222 3457899999999987 56678999999995
No 124
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=1.3e-26 Score=201.66 Aligned_cols=221 Identities=11% Similarity=0.063 Sum_probs=150.8
Q ss_pred eeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC
Q 036510 46 QHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125 (288)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d 125 (288)
+.+.++.+|...|++++|+++ +.+|++|+.|+ ++||+..... ..... +...+..+++.++. ..++++|+.|
T Consensus 10 ~~~~~~~~h~~~V~~v~fs~d--g~~la~g~~~~-~~iw~~~~~~---~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~d 80 (355)
T 3vu4_A 10 NPIVPENHVSNPVTDYEFNQD--QSCLILSTLKS-FEIYNVHPVA---HIMSQ--EMRHLSKVRMLHRT-NYVAFVTGVK 80 (355)
T ss_dssp ---------CCCCCEEEECTT--SSEEEEECSSE-EEEEEETTEE---EEEEE--ECSCCCEEEECTTS-SEEEEECSST
T ss_pred CCccccccCCCceEEEEECCC--CCEEEEEcCCE-EEEEecCCcc---eeeee--ecCCeEEEEEcCCC-CEEEEEECCc
Confidence 456677899999999999875 88999988775 7899986533 11222 22357888888764 4455778889
Q ss_pred CcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCC----Cceecccc------------------cCCCceeEE--e
Q 036510 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP----GALVGSGF------------------LDPVQKLCS--G 181 (288)
Q Consensus 126 ~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~----~~~~~~~~------------------~~~~~~l~s--~ 181 (288)
++|++||.+++.... .. .|...|.++.|+++... +.+..-++ +.. .+++. |
T Consensus 81 ~~v~iWd~~~~~~~~---~~-~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~-~~la~~sg 155 (355)
T 3vu4_A 81 EVVHIWDDVKKQDVS---RI-KVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSN-GLLVYSNE 155 (355)
T ss_dssp TEEEEEETTTTEEEE---EE-ECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEET-TEEEEEES
T ss_pred cEEEEEECCCCcEEE---EE-ECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEc-cEEEEeCC
Confidence 999999998754322 22 25668999999876410 00000000 001 23443 6
Q ss_pred ecCCcEEEEEEeCCce-----------eee-eeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCc-EEEEEeecCCCc
Q 036510 182 GCDNTVKVWKLYNGIW-----------KMD-CFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGK-VIIWTVAREGDQ 248 (288)
Q Consensus 182 ~~d~~i~iwd~~~~~~-----------~~~-~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~-i~iw~~~~~~~~ 248 (288)
+.|+.|++||+.++.. .+. ++..+.+|...|.+++|+|++ ++||+|+.|++ |++||++...
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g----~~l~s~s~d~~~v~iwd~~~~~-- 229 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS----DMVATCSQDGTIIRVFKTEDGV-- 229 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS----SEEEEEETTCSEEEEEETTTCC--
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC----CEEEEEeCCCCEEEEEECCCCc--
Confidence 8899999999976420 000 155678999999999999984 78999999999 9999987542
Q ss_pred ccceEee-c-cccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 249 WEGKVLH-D-FKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 249 ~~~~~~~-~-~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
....+. + |..+|.+++|+|||++|++++.|++|+|||+
T Consensus 230 -~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 230 -LVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp -EEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred -EEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 123333 4 7789999999999999999999999999996
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=3e-26 Score=203.58 Aligned_cols=238 Identities=10% Similarity=0.032 Sum_probs=179.8
Q ss_pred cceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeE-----EEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeec
Q 036510 12 DTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLA-----KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE 86 (288)
Q Consensus 12 ~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~ 86 (288)
..+.+++|+|+++++++++.|++|++||...+ +.+. .+.+|...|++++|++ ++.++++++.|+.|++||+
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~s~~~d~~v~~~d~ 198 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSG--QTVRLSPPEKYKKKLGFVETISIPE--HNELWVSQMQANAVHVFDL 198 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTC--CEEEECCCHHHHTTCCEEEEEEEGG--GTEEEEEEGGGTEEEEEET
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCC--eEeeecCcccccccCCceeEEEEcC--CCEEEEEECCCCEEEEEEC
Confidence 34568899998888888889999999998643 3333 3458899999999965 3889999999999999999
Q ss_pred CCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCce
Q 036510 87 GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL 166 (288)
Q Consensus 87 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~ 166 (288)
.++. ....+..|...+.+++|+|++ ..++++++.|+.|++||++.+.. ..... +...+.++.|+|++
T Consensus 199 ~~~~---~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~i~~~d~~~~~~---~~~~~-~~~~~~~~~~~~~g----- 265 (433)
T 3bws_A 199 KTLA---YKATVDLTGKWSKILLYDPIR-DLVYCSNWISEDISVIDRKTKLE---IRKTD-KIGLPRGLLLSKDG----- 265 (433)
T ss_dssp TTCC---EEEEEECSSSSEEEEEEETTT-TEEEEEETTTTEEEEEETTTTEE---EEECC-CCSEEEEEEECTTS-----
T ss_pred CCce---EEEEEcCCCCCeeEEEEcCCC-CEEEEEecCCCcEEEEECCCCcE---EEEec-CCCCceEEEEcCCC-----
Confidence 7654 345566788899999999984 34456677899999999976432 22222 23458899999987
Q ss_pred ecccccCCCceeEEee--------cCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEE
Q 036510 167 VGSGFLDPVQKLCSGG--------CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVI 238 (288)
Q Consensus 167 ~~~~~~~~~~~l~s~~--------~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~ 238 (288)
+.+++++ .|+.|++||+.++. .... ..|...+.++.|+|++ ..++++++.|+.|+
T Consensus 266 ---------~~l~~~~~~~~~~~~~dg~i~~~d~~~~~----~~~~-~~~~~~~~~~~~~~~g---~~l~~~~~~~~~v~ 328 (433)
T 3bws_A 266 ---------KELYIAQFSASNQESGGGRLGIYSMDKEK----LIDT-IGPPGNKRHIVSGNTE---NKIYVSDMCCSKIE 328 (433)
T ss_dssp ---------SEEEEEEEESCTTCSCCEEEEEEETTTTE----EEEE-EEEEECEEEEEECSST---TEEEEEETTTTEEE
T ss_pred ---------CEEEEEECCCCccccCCCeEEEEECCCCc----EEee-ccCCCCcceEEECCCC---CEEEEEecCCCEEE
Confidence 5666666 58899999998763 2222 2455578999999984 24667889999999
Q ss_pred EEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeC---------------CCcEEEeEc
Q 036510 239 IWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADG---------------NNNVTLWEE 287 (288)
Q Consensus 239 iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~---------------d~~v~~w~~ 287 (288)
+||+.... .... ..+...+.+++|+|+|+++++++. ||.|++||.
T Consensus 329 v~d~~~~~---~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~ 388 (433)
T 3bws_A 329 VYDLKEKK---VQKS-IPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDT 388 (433)
T ss_dssp EEETTTTE---EEEE-EECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred EEECCCCc---EEEE-ecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEEC
Confidence 99987431 1122 234567999999999999998887 569999995
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=8.6e-25 Score=191.59 Aligned_cols=224 Identities=11% Similarity=0.085 Sum_probs=167.2
Q ss_pred CEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEE-EEeeCCCcEEEeecCCCCceEEeEEeecCC
Q 036510 24 KRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSIL-ASCSFDGTVIIWKEGNSNEWIKDHVFEDHK 102 (288)
Q Consensus 24 ~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l-~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~ 102 (288)
.++++++.|++|++||+.. ++.+..+..|. .+.+++|+++ ++++ ++++.|++|++||+.++. ....+..+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~--~~~~~~~~~~~-~~~~~~~s~d--g~~l~~~~~~d~~i~v~d~~~~~---~~~~~~~~~ 74 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTS--NKVTATIPVGS-NPMGAVISPD--GTKVYVANAHSNDVSIIDTATNN---VIATVPAGS 74 (391)
T ss_dssp EEEEEETTTTEEEEEETTT--TEEEEEEECSS-SEEEEEECTT--SSEEEEEEGGGTEEEEEETTTTE---EEEEEECSS
T ss_pred EEEEEcCCCCEEEEEECCC--CeEEEEeecCC-CcceEEECCC--CCEEEEECCCCCeEEEEECCCCe---EEEEEECCC
Confidence 4688899999999999854 46677777765 4899999865 6655 788899999999997654 334454443
Q ss_pred CceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEee
Q 036510 103 SSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGG 182 (288)
Q Consensus 103 ~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~ 182 (288)
.+.+++|+|++ ..++++++.++.|++||+..+... .... +...+.++.|+|++. .++++++
T Consensus 75 -~v~~~~~spdg-~~l~~~~~~~~~v~v~d~~~~~~~---~~~~-~~~~~~~~~~s~dg~-------------~l~~~~~ 135 (391)
T 1l0q_A 75 -SPQGVAVSPDG-KQVYVTNMASSTLSVIDTTSNTVA---GTVK-TGKSPLGLALSPDGK-------------KLYVTNN 135 (391)
T ss_dssp -SEEEEEECTTS-SEEEEEETTTTEEEEEETTTTEEE---EEEE-CSSSEEEEEECTTSS-------------EEEEEET
T ss_pred -CccceEECCCC-CEEEEEECCCCEEEEEECCCCeEE---EEEe-CCCCcceEEECCCCC-------------EEEEEeC
Confidence 89999999984 344566777899999999865322 2222 344689999999872 2347888
Q ss_pred cCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEE-EEEeCCCcEEEEEeecCCCcccceEeeccccCe
Q 036510 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTI-ASASEDGKVIIWTVAREGDQWEGKVLHDFKTPV 261 (288)
Q Consensus 183 ~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l-~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i 261 (288)
.|+.|++||+.++. .+..+..|. .+.++.|+|++ .+| ++++.|+.|++||++... ......+...+
T Consensus 136 ~~~~v~~~d~~~~~----~~~~~~~~~-~~~~~~~~~dg----~~l~~~~~~~~~v~~~d~~~~~----~~~~~~~~~~~ 202 (391)
T 1l0q_A 136 GDKTVSVINTVTKA----VINTVSVGR-SPKGIAVTPDG----TKVYVANFDSMSISVIDTVTNS----VIDTVKVEAAP 202 (391)
T ss_dssp TTTEEEEEETTTTE----EEEEEECCS-SEEEEEECTTS----SEEEEEETTTTEEEEEETTTTE----EEEEEECSSEE
T ss_pred CCCEEEEEECCCCc----EEEEEecCC-CcceEEECCCC----CEEEEEeCCCCEEEEEECCCCe----EEEEEecCCCc
Confidence 89999999998763 333444443 46999999985 445 788899999999986531 11122345678
Q ss_pred EEEEeecCCCEEEEEe---CCCcEEEeEc
Q 036510 262 YRVSWSLTGNILAVAD---GNNNVTLWEE 287 (288)
Q Consensus 262 ~~~~~spdg~~l~s~~---~d~~v~~w~~ 287 (288)
.+++|+|+|++|++++ .++.|++||.
T Consensus 203 ~~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 203 SGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp EEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred cceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 9999999999999998 6899999995
No 127
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.93 E-value=1e-22 Score=175.89 Aligned_cols=256 Identities=11% Similarity=0.110 Sum_probs=171.8
Q ss_pred cccceEEEEEcCCCCEEEEeeC---CCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEee-CCCcEEEee
Q 036510 10 HEDTVHDVAMDYYGKRLATASS---DYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCS-FDGTVIIWK 85 (288)
Q Consensus 10 h~~~v~~~~~s~~g~~l~s~~~---d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s-~d~~v~iwd 85 (288)
+...+..++|+|+|+ |++++. ++.|++|+++.+..+.+..+..|...+..++|+++ +++|++++ .++++++|+
T Consensus 38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spd--g~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEA--RQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETT--TTEEEEEETTTTEEEEEE
T ss_pred ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCC--CCEEEEEeCCCCEEEEEE
Confidence 445567789999999 555554 68999999965544456666667788899999875 78777777 789999999
Q ss_pred cCCCCceEEeEEeec---------CCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeecc-CCCCeeEE
Q 036510 86 EGNSNEWIKDHVFED---------HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQA-HPVGVTSV 155 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~---------h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~v~~i 155 (288)
+...........+.. +...+.+++|+|++ .++++...++.|++|++...+.......... .......+
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg--~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~ 192 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDN--RLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHL 192 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTS--CEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCC--cEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceE
Confidence 854333222222321 11247889999985 4677777788999999984443332222122 22357789
Q ss_pred EeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCC------cceEEEEecCCCCCCCcEE-
Q 036510 156 SWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHT------DWVRDVAWAPNLGLPKSTI- 228 (288)
Q Consensus 156 ~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~------~~V~~v~~sp~~~~~~~~l- 228 (288)
.|+|++. .+++++..++.|.+|++......++....+.... ..+..++|+|++ ++|
T Consensus 193 ~~spdg~-------------~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG----~~l~ 255 (347)
T 3hfq_A 193 VFSPDGQ-------------YAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDG----HFLY 255 (347)
T ss_dssp EECTTSS-------------EEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTS----CEEE
T ss_pred EECCCCC-------------EEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCC----CEEE
Confidence 9999872 2455667788999999985211222222222211 458899999985 445
Q ss_pred EEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCC-CcEEEeEc
Q 036510 229 ASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGN-NNVTLWEE 287 (288)
Q Consensus 229 ~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d-~~v~~w~~ 287 (288)
++...++.|.+|++...+.......+..+...+..++|+|||++|++++.+ +.|.+|++
T Consensus 256 v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 256 VSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp EEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEE
Confidence 667779999999987432111112222334567899999999999888765 89999953
No 128
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=6.3e-23 Score=175.88 Aligned_cols=255 Identities=15% Similarity=0.224 Sum_probs=169.1
Q ss_pred ccccceEEEEEcCCCCEEEEeeCC-CcEEEEEeC--CCCceeeEEEeccccCeEEEEecCCCCCCEEEEee-CCCcEEEe
Q 036510 9 GHEDTVHDVAMDYYGKRLATASSD-YSIKIIGVG--NNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCS-FDGTVIIW 84 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l~s~~~d-~~i~lwd~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s-~d~~v~iw 84 (288)
.|...+.+++|+|+|++|++++.+ +.|++|+++ .+..+.+..+..+. .+..++|+++ +++|+.++ .++.|++|
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~d--g~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQ--GQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTT--SSEEEEEETTTTEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCC--CCEEEEEecCCCeEEEE
Confidence 466778889999999999988887 999999996 33334455555544 7789999865 77665554 58999999
Q ss_pred ecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEe-CCCcEEEEeecCCCCeeeEE--eec-cCCCCeeEEEeCCC
Q 036510 85 KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS-SDGNISVFTARADGGWDTSR--IDQ-AHPVGVTSVSWAPS 160 (288)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~-~d~~i~i~d~~~~~~~~~~~--~~~-~~~~~v~~i~~~p~ 160 (288)
|+.++........+.. ...+.+++|+|+ +..+++++ .++.|.+||+...+...... ... .....+..+.|+|+
T Consensus 112 d~~~~~~~~~~~~~~~-~~~~~~~~~s~d--g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd 188 (343)
T 1ri6_A 112 RLEDGLPVGVVDVVEG-LDGCHSANISPD--NRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPN 188 (343)
T ss_dssp EEETTEEEEEEEEECC-CTTBCCCEECTT--SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTT
T ss_pred ECCCCccccccccccC-CCCceEEEECCC--CCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCC
Confidence 9853322223333433 346899999998 44445554 88999999998634332221 112 23346788999998
Q ss_pred CCCCceecccccCCCceeEEeecCCcEEEEEEeC--Ccee-eeeeeccc-cC--CcceEEEEecCCCCCCCcEEEEEeCC
Q 036510 161 TAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN--GIWK-MDCFPALQ-MH--TDWVRDVAWAPNLGLPKSTIASASED 234 (288)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--~~~~-~~~~~~~~-~h--~~~V~~v~~sp~~~~~~~~l~s~s~D 234 (288)
+. .+++++..++.|.+||+.. +... ......+. ++ ...+.+++|+|++ ..++++...|
T Consensus 189 g~-------------~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg---~~l~v~~~~~ 252 (343)
T 1ri6_A 189 EQ-------------YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG---RHLYACDRTA 252 (343)
T ss_dssp SS-------------EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTS---SEEEEEETTT
T ss_pred CC-------------EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCC---CEEEEEecCC
Confidence 72 2445666889999999853 3211 11122121 11 2357789999985 2344466689
Q ss_pred CcEEEEEeecCCCc-ccceEeeccccCeEEEEeecCCCEEEEEe-CCCcEEEeE
Q 036510 235 GKVIIWTVAREGDQ-WEGKVLHDFKTPVYRVSWSLTGNILAVAD-GNNNVTLWE 286 (288)
Q Consensus 235 ~~i~iw~~~~~~~~-~~~~~~~~~~~~i~~~~~spdg~~l~s~~-~d~~v~~w~ 286 (288)
+.|++|++...... .....+.. ...+..++|+|||++|++++ .++.|++|+
T Consensus 253 ~~i~v~d~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 253 SLITVFSVSEDGSVLSKEGFQPT-ETQPRGFNVDHSGKYLIAAGQKSHHISVYE 305 (343)
T ss_dssp TEEEEEEECTTSCCEEEEEEEEC-SSSCCCEEECTTSSEEEEECTTTCEEEEEE
T ss_pred CEEEEEEEcCCCCceEEeeeecC-CCccceEEECCCCCEEEEecCCCCeEEEEE
Confidence 99999999742111 11111222 23478899999999988887 589999995
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=6.1e-24 Score=188.73 Aligned_cols=222 Identities=16% Similarity=0.180 Sum_probs=165.2
Q ss_pred CCEEEEeeCC------CcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCC---cEEEeecCCCCceE
Q 036510 23 GKRLATASSD------YSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDG---TVIIWKEGNSNEWI 93 (288)
Q Consensus 23 g~~l~s~~~d------~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~---~v~iwd~~~~~~~~ 93 (288)
+..++.++.+ ++|++||+++ .....+.+|...+.+++|+|+ |+.|++++.|+ .|++||+.++..
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g---~~~~~l~~~~~~v~~~~~Spd--g~~la~~s~~~~~~~i~~~d~~tg~~-- 215 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDG---YNQFVVHRSPQPLMSPAWSPD--GSKLAYVTFESGRSALVIQTLANGAV-- 215 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTS---CSCEEEEEESSCEEEEEECTT--SSEEEEEECTTSSCEEEEEETTTCCE--
T ss_pred CCEEEEEEecCCCCccceEEEEcCCC---CCCEEEeCCCCcceeeEEcCC--CCEEEEEEecCCCcEEEEEECCCCcE--
Confidence 6667766654 7999999864 345677889999999999975 89999999885 999999987642
Q ss_pred EeEEeecCCCceeEEEeccCCCCeEEE-EEeCCCc--EEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceeccc
Q 036510 94 KDHVFEDHKSSVNSIDWAPHELGLCLA-CGSSDGN--ISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSG 170 (288)
Q Consensus 94 ~~~~~~~h~~~v~~l~~~p~~~~~~l~-sg~~d~~--i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~ 170 (288)
..+..|...+.+++|+|+ +..++ +++.++. |++||++.+. ......|...+.++.|+|++
T Consensus 216 --~~l~~~~~~~~~~~~spd--g~~la~~~~~~g~~~i~~~d~~~~~----~~~l~~~~~~~~~~~~spdg--------- 278 (415)
T 2hqs_A 216 --RQVASFPRHNGAPAFSPD--GSKLAFALSKTGSLNLYVMDLASGQ----IRQVTDGRSNNTEPTWFPDS--------- 278 (415)
T ss_dssp --EEEECCSSCEEEEEECTT--SSEEEEEECTTSSCEEEEEETTTCC----EEECCCCSSCEEEEEECTTS---------
T ss_pred --EEeecCCCcccCEEEcCC--CCEEEEEEecCCCceEEEEECCCCC----EEeCcCCCCcccceEECCCC---------
Confidence 245668889999999998 44444 6766665 8889987643 13345677789999999997
Q ss_pred ccCCCceeEEeec-CC--cEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCC---CcEEEEEeec
Q 036510 171 FLDPVQKLCSGGC-DN--TVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASED---GKVIIWTVAR 244 (288)
Q Consensus 171 ~~~~~~~l~s~~~-d~--~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D---~~i~iw~~~~ 244 (288)
+.|+.++. ++ .|.+||+.++. ...+..|...+.++.|+|++ ++|++++.+ ..|++||+..
T Consensus 279 -----~~l~~~s~~~g~~~i~~~d~~~~~-----~~~l~~~~~~~~~~~~spdG----~~l~~~~~~~g~~~i~~~d~~~ 344 (415)
T 2hqs_A 279 -----QNLAFTSDQAGRPQVYKVNINGGA-----PQRITWEGSQNQDADVSSDG----KFMVMVSSNGGQQHIAKQDLAT 344 (415)
T ss_dssp -----SEEEEEECTTSSCEEEEEETTSSC-----CEECCCSSSEEEEEEECTTS----SEEEEEEECSSCEEEEEEETTT
T ss_pred -----CEEEEEECCCCCcEEEEEECCCCC-----EEEEecCCCcccCeEECCCC----CEEEEEECcCCceEEEEEECCC
Confidence 56666665 45 46666766542 22344566789999999984 678888764 5899999865
Q ss_pred CCCcccceEeeccccCeEEEEeecCCCEEEEEeCCC---cEEEeEc
Q 036510 245 EGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNN---NVTLWEE 287 (288)
Q Consensus 245 ~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~---~v~~w~~ 287 (288)
.. ...+..+. .+.+++|+|||++|++++.++ .|++||+
T Consensus 345 ~~----~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 345 GG----VQVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp CC----EEECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred CC----EEEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEEC
Confidence 32 12333333 789999999999999998877 7999985
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=1.6e-22 Score=185.41 Aligned_cols=245 Identities=12% Similarity=0.086 Sum_probs=177.2
Q ss_pred eEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecC----CCCCCEEEEee-CCCcEEEeecCC
Q 036510 14 VHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH----PKFGSILASCS-FDGTVIIWKEGN 88 (288)
Q Consensus 14 v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~~~l~s~s-~d~~v~iwd~~~ 88 (288)
+..+.|+|+|++|++++.|++|++||+...+.+.+.++.. ...+..++|++ + |+++++++ .+++|.+||..+
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~d--g~~l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYE--DRYTIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCT--TTEEEEEEEESSEEEEEETTT
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCC--CCEEEEEEccCCeEEEEeccc
Confidence 7899999999999999999999999984234566777774 44579999986 5 78888777 589999999876
Q ss_pred CCceEEeEEeec----------C-CCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEe
Q 036510 89 SNEWIKDHVFED----------H-KSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSW 157 (288)
Q Consensus 89 ~~~~~~~~~~~~----------h-~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~ 157 (288)
... ...+.. | ...+.++.++|++ ..++++...++.|.+||............ .+...+..+.|
T Consensus 258 ~~~---~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~-~~~~vs~~~~g~i~vvd~~~~~~l~~~~i--~~~~~~~~~~~ 331 (543)
T 1nir_A 258 LEP---KQIVSTRGMTVDTQTYHPEPRVAAIIASHEH-PEFIVNVKETGKVLLVNYKDIDNLTVTSI--GAAPFLHDGGW 331 (543)
T ss_dssp CCE---EEEEECCEECSSSCCEESCCCEEEEEECSSS-SEEEEEETTTTEEEEEECTTSSSCEEEEE--ECCSSCCCEEE
T ss_pred ccc---ceeecccCcccCccccccCCceEEEEECCCC-CEEEEEECCCCeEEEEEecCCCcceeEEe--ccCcCccCceE
Confidence 552 233332 2 2368899999975 56788888999999999976543332222 24556778999
Q ss_pred CCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccc----cCCcceEEEEecCCCCCCCcEEEEEe-
Q 036510 158 APSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQ----MHTDWVRDVAWAPNLGLPKSTIASAS- 232 (288)
Q Consensus 158 ~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----~h~~~V~~v~~sp~~~~~~~~l~s~s- 232 (288)
+|++. .+++++..+++|.+||..++. ++..+. .|......+ ++|+. +..+|+++
T Consensus 332 spdg~-------------~l~va~~~~~~v~v~D~~tg~----l~~~i~~g~~ph~g~g~~~-~~p~~---g~~~~s~~~ 390 (543)
T 1nir_A 332 DSSHR-------------YFMTAANNSNKVAVIDSKDRR----LSALVDVGKTPHPGRGANF-VHPKY---GPVWSTSHL 390 (543)
T ss_dssp CTTSC-------------EEEEEEGGGTEEEEEETTTTE----EEEEEECSSSBCCTTCEEE-EETTT---EEEEEEEBS
T ss_pred CCCCC-------------EEEEEecCCCeEEEEECCCCe----EEEeeccCCCCCCCCCccc-CCCCC---ccEEEeccC
Confidence 99872 345566778999999998873 333333 265444443 46764 35677776
Q ss_pred CCCcEEEEEeecCCC----cccceEeeccccCeEEEEeecCCCEEEEEe-------CCCcEEEeEcC
Q 036510 233 EDGKVIIWTVAREGD----QWEGKVLHDFKTPVYRVSWSLTGNILAVAD-------GNNNVTLWEEA 288 (288)
Q Consensus 233 ~D~~i~iw~~~~~~~----~~~~~~~~~~~~~i~~~~~spdg~~l~s~~-------~d~~v~~w~~~ 288 (288)
.|++|.+|++...+. ......+..+...+..++|||||++|++++ .+++|.|||++
T Consensus 391 ~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~ 457 (543)
T 1nir_A 391 GDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLK 457 (543)
T ss_dssp SSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETT
T ss_pred CCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECC
Confidence 689999999876321 112344555666788999999999999987 27899999963
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=2.1e-22 Score=168.49 Aligned_cols=241 Identities=11% Similarity=0.058 Sum_probs=169.4
Q ss_pred ccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCC-CCceeeEEEecc-ccCeEEEEecCCCCCCEEEEee--CCCcEE
Q 036510 7 ETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGN-NTSQHLAKLSGH-KGAVWEVAWAHPKFGSILASCS--FDGTVI 82 (288)
Q Consensus 7 ~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~-~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~s--~d~~v~ 82 (288)
+..|...|.+++|+|+|++|++++ ++.|++||+.. . +....+.+| ...+.+++|+++ +++|++++ .++..+
T Consensus 37 ~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~~~~ 111 (297)
T 2ojh_A 37 VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDP--SPEKVDTGFATICNNDHGISPD--GALYAISDKVEFGKSA 111 (297)
T ss_dssp EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCC--SCEECCCTTCCCBCSCCEECTT--SSEEEEEECTTTSSCE
T ss_pred eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCC--CceEeccccccccccceEECCC--CCEEEEEEeCCCCcce
Confidence 346888999999999999999887 78999999865 3 333444455 367888999865 88999988 446677
Q ss_pred EeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCC
Q 036510 83 IWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTA 162 (288)
Q Consensus 83 iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~ 162 (288)
||.+..... ....+..+ ..+.+++|+|++ ..++++++.++.+++|++...... ......+...+.++.|+|++
T Consensus 112 l~~~~~~~~--~~~~~~~~-~~~~~~~~spdg-~~l~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~s~dg- 184 (297)
T 2ojh_A 112 IYLLPSTGG--TPRLMTKN-LPSYWHGWSPDG-KSFTYCGIRDQVFDIYSMDIDSGV--ETRLTHGEGRNDGPDYSPDG- 184 (297)
T ss_dssp EEEEETTCC--CCEECCSS-SSEEEEEECTTS-SEEEEEEEETTEEEEEEEETTTCC--EEECCCSSSCEEEEEECTTS-
T ss_pred EEEEECCCC--ceEEeecC-CCccceEECCCC-CEEEEEECCCCceEEEEEECCCCc--ceEcccCCCccccceECCCC-
Confidence 776532221 12233333 358999999984 334447788999999997543221 23334566789999999987
Q ss_pred CCceecccccCCCceeE-EeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCC-------
Q 036510 163 PGALVGSGFLDPVQKLC-SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASED------- 234 (288)
Q Consensus 163 ~~~~~~~~~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D------- 234 (288)
+.|+ ++..++.++||++.... .....+..|...+.++.|+|++ ++|++++.|
T Consensus 185 -------------~~l~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~s~dg----~~l~~~~~~~~~~~~~ 244 (297)
T 2ojh_A 185 -------------RWIYFNSSRTGQMQIWRVRVDG---SSVERITDSAYGDWFPHPSPSG----DKVVFVSYDADVFDHP 244 (297)
T ss_dssp -------------SEEEEEECTTSSCEEEEEETTS---SCEEECCCCSEEEEEEEECTTS----SEEEEEEEETTCCSCC
T ss_pred -------------CEEEEEecCCCCccEEEECCCC---CCcEEEecCCcccCCeEECCCC----CEEEEEEcCCCCCccc
Confidence 4455 44468999999997322 1234456677789999999984 678888765
Q ss_pred ----CcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCC
Q 036510 235 ----GKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNN 280 (288)
Q Consensus 235 ----~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~ 280 (288)
..|.+||+..... .......++...+..++|+|||++|++++.|.
T Consensus 245 ~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 245 RDLDVRVQLMDMDGGNV-ETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp SSEEEEEEEEETTSCSC-EEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred ccCceEEEEEecCCCCc-eeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999865321 11122235567889999999999999887664
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=1.3e-21 Score=173.83 Aligned_cols=223 Identities=15% Similarity=0.105 Sum_probs=165.3
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCC---cEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEE-EeeCCCc-
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDY---SIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILA-SCSFDGT- 80 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~---~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~-s~s~d~~- 80 (288)
.+.+|...|.+++|+|+|++|++++.|+ .|++||+..+ +. ..+..|...+.+++|+|+ |+.|+ +++.|+.
T Consensus 173 ~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg--~~-~~l~~~~~~~~~~~~spd--g~~la~~~~~~g~~ 247 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG--AV-RQVASFPRHNGAPAFSPD--GSKLAFALSKTGSL 247 (415)
T ss_dssp EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC--CE-EEEECCSSCEEEEEECTT--SSEEEEEECTTSSC
T ss_pred EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCC--cE-EEeecCCCcccCEEEcCC--CCEEEEEEecCCCc
Confidence 3457899999999999999999999885 9999998643 22 356788889999999875 78777 7776665
Q ss_pred -EEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeC-CC--cEEEEeecCCCCeeeEEeeccCCCCeeEEE
Q 036510 81 -VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSS-DG--NISVFTARADGGWDTSRIDQAHPVGVTSVS 156 (288)
Q Consensus 81 -v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~-d~--~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 156 (288)
|.+||+.++. ...+..|...+.+++|+|+ +..+++++. ++ .|++||+..+.. .....+...+.++.
T Consensus 248 ~i~~~d~~~~~----~~~l~~~~~~~~~~~~spd--g~~l~~~s~~~g~~~i~~~d~~~~~~----~~l~~~~~~~~~~~ 317 (415)
T 2hqs_A 248 NLYVMDLASGQ----IRQVTDGRSNNTEPTWFPD--SQNLAFTSDQAGRPQVYKVNINGGAP----QRITWEGSQNQDAD 317 (415)
T ss_dssp EEEEEETTTCC----EEECCCCSSCEEEEEECTT--SSEEEEEECTTSSCEEEEEETTSSCC----EECCCSSSEEEEEE
T ss_pred eEEEEECCCCC----EEeCcCCCCcccceEECCC--CCEEEEEECCCCCcEEEEEECCCCCE----EEEecCCCcccCeE
Confidence 8899987654 2346678889999999998 555666654 55 566667765432 22234556788999
Q ss_pred eCCCCCCCceecccccCCCceeEEeecC---CcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeC
Q 036510 157 WAPSTAPGALVGSGFLDPVQKLCSGGCD---NTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASE 233 (288)
Q Consensus 157 ~~p~~~~~~~~~~~~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~ 233 (288)
|+|++ ++|+.++.+ ..|.+||+.++.. ..+..|. .+.++.|+|++ ++|++++.
T Consensus 318 ~spdG--------------~~l~~~~~~~g~~~i~~~d~~~~~~-----~~l~~~~-~~~~~~~spdg----~~l~~~s~ 373 (415)
T 2hqs_A 318 VSSDG--------------KFMVMVSSNGGQQHIAKQDLATGGV-----QVLSSTF-LDETPSLAPNG----TMVIYSSS 373 (415)
T ss_dssp ECTTS--------------SEEEEEEECSSCEEEEEEETTTCCE-----EECCCSS-SCEEEEECTTS----SEEEEEEE
T ss_pred ECCCC--------------CEEEEEECcCCceEEEEEECCCCCE-----EEecCCC-CcCCeEEcCCC----CEEEEEEc
Confidence 99997 667766654 5799999887631 2344444 78999999984 67888888
Q ss_pred CC---cEEEEEeecCCCcccceEeeccccCeEEEEeecCCC
Q 036510 234 DG---KVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGN 271 (288)
Q Consensus 234 D~---~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~ 271 (288)
|+ .|.+||+... ....+..+.+.|.+++|+|...
T Consensus 374 ~~~~~~l~~~d~~g~----~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 374 QGMGSVLNLVSTDGR----FKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp ETTEEEEEEEETTSC----CEEECCCSSSEEEEEEECCCCC
T ss_pred CCCccEEEEEECCCC----cEEEeeCCCCCCcCCccccccc
Confidence 77 7899987532 2345566778899999999754
No 133
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=6.3e-22 Score=176.73 Aligned_cols=249 Identities=17% Similarity=0.196 Sum_probs=165.7
Q ss_pred ccceEEEEEcCCCCEEEEeeCCCcEEEEEeCC--------CCceeeE-----EEeccccCeEEEEecCCCCCCEEE----
Q 036510 11 EDTVHDVAMDYYGKRLATASSDYSIKIIGVGN--------NTSQHLA-----KLSGHKGAVWEVAWAHPKFGSILA---- 73 (288)
Q Consensus 11 ~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~--------~~~~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~---- 73 (288)
...++.+++++++.++++++.|+ +++|+... .....+. ..-.|...|.+++|+++ +++|+
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spd--g~~lav~~~ 112 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCD--NLTLSACMM 112 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTT--SCEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCC--CCEEEEEEe
Confidence 44678899999999999999887 88986521 0000011 11235678999999865 78888
Q ss_pred EeeCCCcEEEeecCCC--------CceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEee
Q 036510 74 SCSFDGTVIIWKEGNS--------NEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRID 145 (288)
Q Consensus 74 s~s~d~~v~iwd~~~~--------~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~ 145 (288)
+++.|++|+|||+.+. ........+.+|...|.+++|+|+. +.++++++.||+|++||++.+. .....
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~-~~~las~s~Dg~v~iwD~~~~~---~~~~~ 188 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTV-PSMVAVCLADGSIAVLQVTETV---KVCAT 188 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSC-TTEEEEEETTSCEEEEEESSSE---EEEEE
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCC-CCEEEEEECCCeEEEEEcCCCc---ceeec
Confidence 8999999999998543 1112234556799999999999974 5679999999999999998752 22233
Q ss_pred ccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeec--c-ccCCcceEEEEecCCCC
Q 036510 146 QAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPA--L-QMHTDWVRDVAWAPNLG 222 (288)
Q Consensus 146 ~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~-~~h~~~V~~v~~sp~~~ 222 (288)
.+|...|.+++|+|++ ++|++|+.|++|++||++ +......... . ..|...|.++.|+++.
T Consensus 189 ~~~~~~v~~v~wspdg--------------~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~- 252 (434)
T 2oit_A 189 LPSTVAVTSVCWSPKG--------------KQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTY- 252 (434)
T ss_dssp ECGGGCEEEEEECTTS--------------SCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETT-
T ss_pred cCCCCceeEEEEcCCC--------------CEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCc-
Confidence 4577889999999987 789999999999999987 2211111111 1 1244589999999973
Q ss_pred CCCcEEEE-EeCCC------cEEEEEeecCCCc--ccceEeec-------cccCeEEEEeecCCCEEEEEeCCC-cEEEe
Q 036510 223 LPKSTIAS-ASEDG------KVIIWTVAREGDQ--WEGKVLHD-------FKTPVYRVSWSLTGNILAVADGNN-NVTLW 285 (288)
Q Consensus 223 ~~~~~l~s-~s~D~------~i~iw~~~~~~~~--~~~~~~~~-------~~~~i~~~~~spdg~~l~s~~~d~-~v~~w 285 (288)
.++++ .+.|+ .+++|++...+.. ..-....+ ...+-.-+.+-+|.+++++++... .|.|.
T Consensus 253 ---~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl 329 (434)
T 2oit_A 253 ---VFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSIL 329 (434)
T ss_dssp ---EEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEE
T ss_pred ---eEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEE
Confidence 34433 33443 3899999764321 00011111 122334444558888887776533 34443
No 134
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=1.3e-19 Score=157.25 Aligned_cols=254 Identities=11% Similarity=0.119 Sum_probs=164.2
Q ss_pred cccceEEEEEcCCCCEEEEeeCC----CcEEEEEeCCCCc--eeeEEEeccccCeEEEEecCCCCCCEEEEee-CCCcEE
Q 036510 10 HEDTVHDVAMDYYGKRLATASSD----YSIKIIGVGNNTS--QHLAKLSGHKGAVWEVAWAHPKFGSILASCS-FDGTVI 82 (288)
Q Consensus 10 h~~~v~~~~~s~~g~~l~s~~~d----~~i~lwd~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s-~d~~v~ 82 (288)
+...+..++|+|+|++|++++.+ +.+.+|+++...+ +.+.....+......+++ + +++|+.++ .++++.
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--d--g~~l~~~~~~~~~v~ 123 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--N--GKNIVTANYSGGSIT 123 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--C--SSEEEEEETTTTEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--C--CCEEEEEECCCCEEE
Confidence 45556678999999999999986 7999999865323 334445545566777887 2 56665555 689999
Q ss_pred EeecCCCCceEEeEE-e--ec--------CCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCC------eee----
Q 036510 83 IWKEGNSNEWIKDHV-F--ED--------HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGG------WDT---- 141 (288)
Q Consensus 83 iwd~~~~~~~~~~~~-~--~~--------h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~------~~~---- 141 (288)
+|++........... + .+ +...+.+++|+|++ ..+++++..++.|.+|++..... +..
T Consensus 124 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~ 202 (361)
T 3scy_A 124 VFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG-KYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTP 202 (361)
T ss_dssp EEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEE
T ss_pred EEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC-CEEEEEeCCCCEEEEEEEcCCCCcccccceeecccc
Confidence 999864332111111 1 11 12235789999984 23555556688999999876442 211
Q ss_pred EEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEee-cCCcEEEEEEeCCcee-eeeeeccccCCcceEEEEecC
Q 036510 142 SRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGG-CDNTVKVWKLYNGIWK-MDCFPALQMHTDWVRDVAWAP 219 (288)
Q Consensus 142 ~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~iwd~~~~~~~-~~~~~~~~~h~~~V~~v~~sp 219 (288)
......+......+.|+|++ ++++.++ .++.|.+||+.++... ...+.....+.....++.|+|
T Consensus 203 ~~~~~~~~~~~~~~~~spdg--------------~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~sp 268 (361)
T 3scy_A 203 EAFKVAPGSGPRHLIFNSDG--------------KFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSP 268 (361)
T ss_dssp EEEECCTTCCEEEEEECTTS--------------SEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECT
T ss_pred cceecCCCCCCeEEEEcCCC--------------CEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECC
Confidence 12222344567889999987 5454444 6899999999876321 111222334444568999999
Q ss_pred CCCCCCcEEEEEe-C-CCcEEEEEeecCCCc-ccceEeeccccCeEEEEeecCCCEEEEEe-CCCcEEEeEc
Q 036510 220 NLGLPKSTIASAS-E-DGKVIIWTVAREGDQ-WEGKVLHDFKTPVYRVSWSLTGNILAVAD-GNNNVTLWEE 287 (288)
Q Consensus 220 ~~~~~~~~l~s~s-~-D~~i~iw~~~~~~~~-~~~~~~~~~~~~i~~~~~spdg~~l~s~~-~d~~v~~w~~ 287 (288)
++ ++|++++ . ++.|.+|++...... .....+.. ...+..++|+|||++|++++ .++.|.+|++
T Consensus 269 dg----~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 269 DG----KYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp TS----SEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CC----CEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 85 5665554 4 589999999632111 11112222 44678999999999998888 5789999763
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=1.9e-20 Score=160.27 Aligned_cols=250 Identities=10% Similarity=0.053 Sum_probs=163.8
Q ss_pred cccceEEEEEcCCCCEEEEeeC-CCcEEEEEeCCCCcee-eEEEeccccCeEEEEecCCCCCCEEEEeeCCC---cEEEe
Q 036510 10 HEDTVHDVAMDYYGKRLATASS-DYSIKIIGVGNNTSQH-LAKLSGHKGAVWEVAWAHPKFGSILASCSFDG---TVIIW 84 (288)
Q Consensus 10 h~~~v~~~~~s~~g~~l~s~~~-d~~i~lwd~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~---~v~iw 84 (288)
+...+ .++|+|+|++|++++. ++.|.+||.... +. ...+..+..+..+++|+++ +++++++..++ .|.+|
T Consensus 39 ~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~~i~v~ 113 (331)
T 3u4y_A 39 GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLE--PPKVVAIQEGQSSMADVDITPD--DQFAVTVTGLNHPFNMQSY 113 (331)
T ss_dssp CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSS--SCEEEEEEECSSCCCCEEECTT--SSEEEECCCSSSSCEEEEE
T ss_pred cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCC--ceeEEecccCCCCccceEECCC--CCEEEEecCCCCcccEEEE
Confidence 34555 8999999997766665 899999998644 33 5566666666655999864 78888555553 99999
Q ss_pred ecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCc-EEEEeecCCCCeeeE-EeeccCCCCeeEEEeCCCCC
Q 036510 85 KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN-ISVFTARADGGWDTS-RIDQAHPVGVTSVSWAPSTA 162 (288)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~-i~i~d~~~~~~~~~~-~~~~~~~~~v~~i~~~p~~~ 162 (288)
|+.++. ....+..+ ....+++|+|++ ..+++++..++. |.+|++...+..... ............+.|+|++.
T Consensus 114 d~~~~~---~~~~~~~~-~~~~~~~~spdg-~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~ 188 (331)
T 3u4y_A 114 SFLKNK---FISTIPIP-YDAVGIAISPNG-NGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGN 188 (331)
T ss_dssp ETTTTE---EEEEEECC-TTEEEEEECTTS-SCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSS
T ss_pred ECCCCC---eEEEEECC-CCccceEECCCC-CEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCC
Confidence 997654 23344433 456899999984 235666667788 999999865433211 11112344578899999872
Q ss_pred CCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEE-EEEeCCCcEEEEE
Q 036510 163 PGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTI-ASASEDGKVIIWT 241 (288)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l-~s~s~D~~i~iw~ 241 (288)
.+++++..++.|.+||+.++.. .+.+..+.. ...+..+.|+|++ ++| ++...++.|.+||
T Consensus 189 -------------~l~v~~~~~~~v~v~d~~~~~~-~~~~~~~~~-~~~~~~~~~spdg----~~l~v~~~~~~~i~~~d 249 (331)
T 3u4y_A 189 -------------FAFVANLIGNSIGILETQNPEN-ITLLNAVGT-NNLPGTIVVSRDG----STVYVLTESTVDVFNFN 249 (331)
T ss_dssp -------------EEEEEETTTTEEEEEECSSTTS-CEEEEEEEC-SSCCCCEEECTTS----SEEEEECSSEEEEEEEE
T ss_pred -------------EEEEEeCCCCeEEEEECCCCcc-cceeeeccC-CCCCceEEECCCC----CEEEEEEcCCCEEEEEE
Confidence 2456666789999999987642 011333333 3456889999985 444 4445688999999
Q ss_pred eecCCCcccceEeec---cccC---eEEEEeecCCCEEEEEeC-CCcEEEeEcC
Q 036510 242 VAREGDQWEGKVLHD---FKTP---VYRVSWSLTGNILAVADG-NNNVTLWEEA 288 (288)
Q Consensus 242 ~~~~~~~~~~~~~~~---~~~~---i~~~~~spdg~~l~s~~~-d~~v~~w~~~ 288 (288)
+...+.......... ...+ ...++|+|||++|++++. +++|++||++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 303 (331)
T 3u4y_A 250 QLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTIS 303 (331)
T ss_dssp TTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEec
Confidence 864321000011111 1122 245899999999877665 5699999963
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=1.5e-21 Score=184.91 Aligned_cols=239 Identities=12% Similarity=0.130 Sum_probs=166.8
Q ss_pred ccceEEEEEcCCCCEEEEeeC-CC-----cEEEEEeCCCCceeeEEEecccc------------------------CeEE
Q 036510 11 EDTVHDVAMDYYGKRLATASS-DY-----SIKIIGVGNNTSQHLAKLSGHKG------------------------AVWE 60 (288)
Q Consensus 11 ~~~v~~~~~s~~g~~l~s~~~-d~-----~i~lwd~~~~~~~~~~~~~~h~~------------------------~v~~ 60 (288)
...|..++|+|||++|++++. |+ +|++||+..+ +....+..|.. .+..
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSG--QTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTC--CEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCC--ceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 456889999999999999998 88 8999998654 33344444432 3788
Q ss_pred EEecCCCCCCEEEEeeCCCcEEEeecCCCC--ceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCC
Q 036510 61 VAWAHPKFGSILASCSFDGTVIIWKEGNSN--EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGG 138 (288)
Q Consensus 61 ~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~ 138 (288)
++|+++ |++|++++. +.|.+||+.++. . ...+..|...+.+++|+|+ +..++.++ ++.|++||+..+..
T Consensus 114 ~~~SpD--g~~l~~~~~-~~i~~~d~~~~~~~~---~~~l~~~~~~~~~~~~SPD--G~~la~~~-~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 114 YQWSPD--AQRLLFPLG-GELYLYDLKQEGKAA---VRQLTHGEGFATDAKLSPK--GGFVSFIR-GRNLWVIDLASGRQ 184 (741)
T ss_dssp CEECTT--SSEEEEEET-TEEEEEESSSCSTTS---CCBCCCSSSCEEEEEECTT--SSEEEEEE-TTEEEEEETTTTEE
T ss_pred eEECCC--CCEEEEEeC-CcEEEEECCCCCcce---EEEcccCCcccccccCCCC--CCEEEEEe-CCcEEEEecCCCCE
Confidence 999875 899998887 999999997651 1 1235567788999999998 56677776 56899999875421
Q ss_pred eeeEEeeccCCC----------------CeeEEEeCCCCCCCceecccccCCCceeEEeecCC-----------------
Q 036510 139 WDTSRIDQAHPV----------------GVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDN----------------- 185 (288)
Q Consensus 139 ~~~~~~~~~~~~----------------~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~----------------- 185 (288)
......+.. .+..+.|+|++ +.|+.++.|+
T Consensus 185 ---~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg--------------~~l~~~~~d~~~~~~~~~~~~~p~~~~ 247 (741)
T 2ecf_A 185 ---MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDD--------------SAIAYARIDESPVPVQKRYEVYADRTD 247 (741)
T ss_dssp ---EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTS--------------SCEEEEEEECTTSCEEEEEEECSSCEE
T ss_pred ---EEeccCCccceeccccceeeeeccccccceEECCCC--------------CEEEEEEEcCCCCceEecCCCCCCccc
Confidence 122122222 14679999997 5666666554
Q ss_pred ----------------cEEEEEEeC-CceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeC-----CCcEEEEEee
Q 036510 186 ----------------TVKVWKLYN-GIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASE-----DGKVIIWTVA 243 (288)
Q Consensus 186 ----------------~i~iwd~~~-~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~-----D~~i~iw~~~ 243 (288)
.|.+||+.+ +.. ..+.....|...+.++.| ||+ ++|+.++. +..|++||+.
T Consensus 248 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~-pDg----~~l~~~~~~~~~~~~~i~~~d~~ 320 (741)
T 2ecf_A 248 VIEQRYPAAGDANVQVKLGVISPAEQAQT--QWIDLGKEQDIYLARVNW-RDP----QHLSFQRQSRDQKKLDLVEVTLA 320 (741)
T ss_dssp EEEEECCBTTSCCCEEEEEEECSSTTCCC--EEECCCSCSSEEEEEEEE-EET----TEEEEEEEETTSSEEEEEEEETT
T ss_pred ceEeecCCCCCCCCeeEEEEEECCCCCce--EEecCCCCcceEEEEEEe-CCC----CEEEEEEecccCCeEEEEEEECC
Confidence 678888876 531 111111257788999999 984 66776653 5679999986
Q ss_pred cCCCcccceEeeccc-c---CeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 244 REGDQWEGKVLHDFK-T---PVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 244 ~~~~~~~~~~~~~~~-~---~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
.... ..+...+. . .+..++|+|||+++++++.|+.++||..
T Consensus 321 ~g~~---~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 365 (741)
T 2ecf_A 321 SNQQ---RVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRI 365 (741)
T ss_dssp TCCE---EEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEE
T ss_pred CCce---EEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEE
Confidence 5321 12222222 2 3468999999999999999998888863
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=2.5e-20 Score=155.78 Aligned_cols=223 Identities=16% Similarity=0.188 Sum_probs=157.3
Q ss_pred EeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCC-CCceEEeEEeecC-CCce
Q 036510 28 TASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGN-SNEWIKDHVFEDH-KSSV 105 (288)
Q Consensus 28 s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~~~~h-~~~v 105 (288)
+++.|++|++||+..+ + ...+..|...|.+++|+++ +++|++++ ++.|.+||+.. +.. ......+ ...+
T Consensus 17 ~~~~~~~i~~~d~~~~--~-~~~~~~~~~~v~~~~~spd--g~~l~~~~-~~~i~~~d~~~~~~~---~~~~~~~~~~~~ 87 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTR--K-MRVVWQTPELFEAPNWSPD--GKYLLLNS-EGLLYRLSLAGDPSP---EKVDTGFATICN 87 (297)
T ss_dssp -CCCCEEEEEEETTTT--E-EEEEEEESSCCEEEEECTT--SSEEEEEE-TTEEEEEESSSCCSC---EECCCTTCCCBC
T ss_pred CCCcceeEEEEeCCCC--c-eeeeccCCcceEeeEECCC--CCEEEEEc-CCeEEEEeCCCCCCc---eEeccccccccc
Confidence 4678899999998643 3 3356678999999999875 88898876 78999999976 542 2223344 4678
Q ss_pred eEEEeccCCCCeEEEEEe--CCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeE-Eee
Q 036510 106 NSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLC-SGG 182 (288)
Q Consensus 106 ~~l~~~p~~~~~~l~sg~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~-s~~ 182 (288)
.+++|+|+ +..+++++ .++...||.+...... ...... ...+..+.|+|++ +.|+ +++
T Consensus 88 ~~~~~spd--g~~l~~~~~~~~~~~~l~~~~~~~~~--~~~~~~-~~~~~~~~~spdg--------------~~l~~~~~ 148 (297)
T 2ojh_A 88 NDHGISPD--GALYAISDKVEFGKSAIYLLPSTGGT--PRLMTK-NLPSYWHGWSPDG--------------KSFTYCGI 148 (297)
T ss_dssp SCCEECTT--SSEEEEEECTTTSSCEEEEEETTCCC--CEECCS-SSSEEEEEECTTS--------------SEEEEEEE
T ss_pred cceEECCC--CCEEEEEEeCCCCcceEEEEECCCCc--eEEeec-CCCccceEECCCC--------------CEEEEEEC
Confidence 99999998 56677776 4456667666432211 112222 2348889999987 4444 888
Q ss_pred cCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEe-CCCcEEEEEeecCCCcccceEeeccccCe
Q 036510 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASAS-EDGKVIIWTVAREGDQWEGKVLHDFKTPV 261 (288)
Q Consensus 183 ~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s-~D~~i~iw~~~~~~~~~~~~~~~~~~~~i 261 (288)
.|+.++||++..... ....+..|...+.++.|+|++ .+|+.++ .|+.+++|++..... ....+..+...+
T Consensus 149 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~s~dg----~~l~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~ 219 (297)
T 2ojh_A 149 RDQVFDIYSMDIDSG---VETRLTHGEGRNDGPDYSPDG----RWIYFNSSRTGQMQIWRVRVDGS--SVERITDSAYGD 219 (297)
T ss_dssp ETTEEEEEEEETTTC---CEEECCCSSSCEEEEEECTTS----SEEEEEECTTSSCEEEEEETTSS--CEEECCCCSEEE
T ss_pred CCCceEEEEEECCCC---cceEcccCCCccccceECCCC----CEEEEEecCCCCccEEEECCCCC--CcEEEecCCccc
Confidence 899999999864321 123445677789999999984 5566555 599999999874322 123444555678
Q ss_pred EEEEeecCCCEEEEEeCC-----------CcEEEeEc
Q 036510 262 YRVSWSLTGNILAVADGN-----------NNVTLWEE 287 (288)
Q Consensus 262 ~~~~~spdg~~l~s~~~d-----------~~v~~w~~ 287 (288)
..++|+|||++|++++.+ +.|++||.
T Consensus 220 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~ 256 (297)
T 2ojh_A 220 WFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDM 256 (297)
T ss_dssp EEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEET
T ss_pred CCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEec
Confidence 899999999999998876 56999985
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.88 E-value=1.3e-20 Score=172.81 Aligned_cols=255 Identities=9% Similarity=0.065 Sum_probs=178.5
Q ss_pred cccceEEEEEcC----CCCEEEEeeC-CCcEEEEEeCCCCceeeEEEec----------ccc-CeEEEEecCCCCCCEEE
Q 036510 10 HEDTVHDVAMDY----YGKRLATASS-DYSIKIIGVGNNTSQHLAKLSG----------HKG-AVWEVAWAHPKFGSILA 73 (288)
Q Consensus 10 h~~~v~~~~~s~----~g~~l~s~~~-d~~i~lwd~~~~~~~~~~~~~~----------h~~-~v~~~~~~~~~~~~~l~ 73 (288)
+...+..++|+| +|++|++++. +++|.+||.. +.+.+.++.. |.. .+..+.++++ .+.+++
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~--t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~-~~~~~v 296 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE--TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE-HPEFIV 296 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT--TCCEEEEEECCEECSSSCCEESCCCEEEEEECSS-SSEEEE
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc--ccccceeecccCcccCccccccCCceEEEEECCC-CCEEEE
Confidence 344578899999 9999999885 8999999974 3456666654 223 6889999875 356788
Q ss_pred EeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEee-ccCCCCe
Q 036510 74 SCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRID-QAHPVGV 152 (288)
Q Consensus 74 s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~v 152 (288)
+...+++|.+||..+.... ....+. +...+..+.|+|++ ..+++++..+++|.+||++++......... ..|+...
T Consensus 297 s~~~~g~i~vvd~~~~~~l-~~~~i~-~~~~~~~~~~spdg-~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g 373 (543)
T 1nir_A 297 NVKETGKVLLVNYKDIDNL-TVTSIG-AAPFLHDGGWDSSH-RYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRG 373 (543)
T ss_dssp EETTTTEEEEEECTTSSSC-EEEEEE-CCSSCCCEEECTTS-CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTC
T ss_pred EECCCCeEEEEEecCCCcc-eeEEec-cCcCccCceECCCC-CEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCC
Confidence 9999999999999765432 222333 55678889999984 234556667899999999876322221111 1255443
Q ss_pred eEEEeCCCCCCCceecccccCCCceeEEee-cCCcEEEEEEeCCc---eeeeeeeccccCCcceEEEEecCCCCCCCcEE
Q 036510 153 TSVSWAPSTAPGALVGSGFLDPVQKLCSGG-CDNTVKVWKLYNGI---WKMDCFPALQMHTDWVRDVAWAPNLGLPKSTI 228 (288)
Q Consensus 153 ~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~iwd~~~~~---~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l 228 (288)
..+ ++|++ +.++++++ .|++|++||+.+.. ...++++.+.+|...+..|.|+|++ ++|
T Consensus 374 ~~~-~~p~~-------------g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg----~~l 435 (543)
T 1nir_A 374 ANF-VHPKY-------------GPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKS----SHL 435 (543)
T ss_dssp EEE-EETTT-------------EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTC----CEE
T ss_pred ccc-CCCCC-------------ccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCC----CcE
Confidence 333 35653 25677775 68999999997621 1135777888898888999999985 678
Q ss_pred EEEe-------CCCcEEEEEeecCCCcccceEe------eccccCeEEEEeecCCCEEEEEe-----CCCcEEEeEcC
Q 036510 229 ASAS-------EDGKVIIWTVAREGDQWEGKVL------HDFKTPVYRVSWSLTGNILAVAD-----GNNNVTLWEEA 288 (288)
Q Consensus 229 ~s~s-------~D~~i~iw~~~~~~~~~~~~~~------~~~~~~i~~~~~spdg~~l~s~~-----~d~~v~~w~~~ 288 (288)
.+++ .+++|.+||+.......+...+ .++...+..+.|+|||++++++. .|++|.|||.+
T Consensus 436 ~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~ 513 (543)
T 1nir_A 436 YVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDK 513 (543)
T ss_dssp EECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETT
T ss_pred EEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECC
Confidence 8876 2779999999765322111111 24456799999999999988762 47999999953
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=1.4e-19 Score=154.99 Aligned_cols=237 Identities=11% Similarity=0.070 Sum_probs=152.8
Q ss_pred EEEEeeCCCcEEEEEeCC-CCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCC-CcEEEeecCC-CCceEEeEEeecC
Q 036510 25 RLATASSDYSIKIIGVGN-NTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFD-GTVIIWKEGN-SNEWIKDHVFEDH 101 (288)
Q Consensus 25 ~l~s~~~d~~i~lwd~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d-~~v~iwd~~~-~~~~~~~~~~~~h 101 (288)
++++++.|+.|++|+++. +..+.+.. ..|...+..++|+++ +++|++++.+ +.|++|++.. .........+..+
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spd--g~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPD--KRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTT--SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCC--CCEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence 455557899999999853 22233333 357778899999865 7878877776 9999999862 1223333344444
Q ss_pred CCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEe
Q 036510 102 KSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSG 181 (288)
Q Consensus 102 ~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~ 181 (288)
. .+..++|+|++ ..+++++..++.|.+||+..+.......... ....+.++.|+|++ +.++++
T Consensus 84 ~-~~~~~~~s~dg-~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg--------------~~l~~~ 146 (343)
T 1ri6_A 84 G-SLTHISTDHQG-QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDN--------------RTLWVP 146 (343)
T ss_dssp S-CCSEEEECTTS-SEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTS--------------SEEEEE
T ss_pred C-CCcEEEEcCCC-CEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCC--------------CEEEEe
Confidence 3 78999999984 2344455568899999996221111222222 23457889999987 455555
Q ss_pred e-cCCcEEEEEEeC-Cceeeeeee--cccc-CCcceEEEEecCCCCCCCcEE-EEEeCCCcEEEEEeecCCCcc-cceEe
Q 036510 182 G-CDNTVKVWKLYN-GIWKMDCFP--ALQM-HTDWVRDVAWAPNLGLPKSTI-ASASEDGKVIIWTVAREGDQW-EGKVL 254 (288)
Q Consensus 182 ~-~d~~i~iwd~~~-~~~~~~~~~--~~~~-h~~~V~~v~~sp~~~~~~~~l-~s~s~D~~i~iw~~~~~~~~~-~~~~~ 254 (288)
+ .++.|.+||+.+ +.. .... .+.. ....+..+.|+|++ +++ +++..++.|++|++....... .....
T Consensus 147 ~~~~~~v~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~pdg----~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~ 220 (343)
T 1ri6_A 147 ALKQDRICLFTVSDDGHL--VAQDPAEVTTVEGAGPRHMVFHPNE----QYAYCVNELNSSVDVWELKDPHGNIECVQTL 220 (343)
T ss_dssp EGGGTEEEEEEECTTSCE--EEEEEEEEECSTTCCEEEEEECTTS----SEEEEEETTTTEEEEEESSCTTSCCEEEEEE
T ss_pred cCCCCEEEEEEecCCCce--eeecccccccCCCCCcceEEECCCC----CEEEEEeCCCCEEEEEEecCCCCcEEEEeec
Confidence 5 899999999986 421 1111 1222 23467899999985 444 555589999999986422111 11111
Q ss_pred ecc------ccCeEEEEeecCCCEEEEEe-CCCcEEEeEc
Q 036510 255 HDF------KTPVYRVSWSLTGNILAVAD-GNNNVTLWEE 287 (288)
Q Consensus 255 ~~~------~~~i~~~~~spdg~~l~s~~-~d~~v~~w~~ 287 (288)
... ...+..++|+|||++|+++. .++.|++|+.
T Consensus 221 ~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~ 260 (343)
T 1ri6_A 221 DMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSV 260 (343)
T ss_dssp ECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEE
Confidence 111 23567899999999887554 7899999985
No 140
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=1.6e-21 Score=174.06 Aligned_cols=202 Identities=17% Similarity=0.194 Sum_probs=144.3
Q ss_pred ccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCC----------CceE---EeEEeecCCCceeEEEeccCCCCeEEE-
Q 036510 55 KGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNS----------NEWI---KDHVFEDHKSSVNSIDWAPHELGLCLA- 120 (288)
Q Consensus 55 ~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~----------~~~~---~~~~~~~h~~~v~~l~~~p~~~~~~l~- 120 (288)
...++.+++++. +.++++++.|+ +++|+.... .... ....+ .+...|.+++|+|+ +.+|+
T Consensus 36 ~~~~n~lavs~~--~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spd--g~~lav 109 (434)
T 2oit_A 36 KERSSLLAVSNK--YGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCD--NLTLSA 109 (434)
T ss_dssp CSCCBCEEEETT--TTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTT--SCEEEE
T ss_pred CCCccEEEEecC--CCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCC--CCEEEE
Confidence 335677888764 67888888888 899874210 0000 00112 35668999999998 55666
Q ss_pred ---EEeCCCcEEEEeecCC--------CCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEE
Q 036510 121 ---CGSSDGNISVFTARAD--------GGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKV 189 (288)
Q Consensus 121 ---sg~~d~~i~i~d~~~~--------~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i 189 (288)
+|+.|+.|++||++.. ..+.......+|...|.++.|+|+.. ++|++++.|++|++
T Consensus 110 ~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~-------------~~las~s~Dg~v~i 176 (434)
T 2oit_A 110 CMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVP-------------SMVAVCLADGSIAV 176 (434)
T ss_dssp EEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCT-------------TEEEEEETTSCEEE
T ss_pred EEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCC-------------CEEEEEECCCeEEE
Confidence 7889999999998643 12222345567889999999999842 78999999999999
Q ss_pred EEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeec-------cccCeE
Q 036510 190 WKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHD-------FKTPVY 262 (288)
Q Consensus 190 wd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~-------~~~~i~ 262 (288)
||++++. ......+|...|.+++|+|++ ++|++|+.|++|++||++. . . ...+.. +...|.
T Consensus 177 wD~~~~~----~~~~~~~~~~~v~~v~wspdg----~~lasgs~dg~v~iwd~~~-~-~--~~~~~~~~~~~~~~~~~v~ 244 (434)
T 2oit_A 177 LQVTETV----KVCATLPSTVAVTSVCWSPKG----KQLAVGKQNGTVVQYLPTL-Q-E--KKVIPCPPFYESDHPVRVL 244 (434)
T ss_dssp EEESSSE----EEEEEECGGGCEEEEEECTTS----SCEEEEETTSCEEEECTTC-C-E--EEEECCCTTCCTTSCEEEE
T ss_pred EEcCCCc----ceeeccCCCCceeEEEEcCCC----CEEEEEcCCCcEEEEccCC-c-c--cccccCCcccCCCCceeEE
Confidence 9998862 233445688899999999984 7899999999999999861 1 1 111111 123789
Q ss_pred EEEeecCCCEEEEE-eCCC------cEEEeEc
Q 036510 263 RVSWSLTGNILAVA-DGNN------NVTLWEE 287 (288)
Q Consensus 263 ~~~~spdg~~l~s~-~~d~------~v~~w~~ 287 (288)
+++|++++.++++. ..|| .+++|++
T Consensus 245 ~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l 276 (434)
T 2oit_A 245 DVLWIGTYVFAIVYAAADGTLETSPDVVMALL 276 (434)
T ss_dssp EEEEEETTEEEEEEEETTCCSSSCCEEEEEEC
T ss_pred EEEEecCceEEEEEccCCCccCCCCceEEEEe
Confidence 99999999887554 3443 3889985
No 141
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=2.6e-21 Score=178.63 Aligned_cols=234 Identities=9% Similarity=0.065 Sum_probs=164.7
Q ss_pred cccceEEEEEcCCCCEEEEeeC-CCcEEEEEeCCCCceeeEEEeccc-cCeEEEEecCCCCCCEEEEeeC---CCcEEEe
Q 036510 10 HEDTVHDVAMDYYGKRLATASS-DYSIKIIGVGNNTSQHLAKLSGHK-GAVWEVAWAHPKFGSILASCSF---DGTVIIW 84 (288)
Q Consensus 10 h~~~v~~~~~s~~g~~l~s~~~-d~~i~lwd~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~l~s~s~---d~~v~iw 84 (288)
+..+|++++|+|||++||+++. |++++||+++.+ + ..++..|. ..+..++|+++ +++++++. +...+||
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g--~-~~~lt~~~~~~~~~~~~spd---~~l~~~~~~~g~~~~~l~ 93 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG--E-TVKLNREPINSVLDPHYGVG---RVILVRDVSKGAEQHALF 93 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT--E-EEECCSSCCSEECEECTTCS---EEEEEEECSTTSCCEEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCC--C-cEeeecccccccccccCCCC---eEEEEeccCCCCcceEEE
Confidence 3568999999999999999887 999999998543 3 34455555 68999999853 67777665 5667777
Q ss_pred ecCC--CCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCC
Q 036510 85 KEGN--SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTA 162 (288)
Q Consensus 85 d~~~--~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~ 162 (288)
.+.. ..... .+..+ ..+...+|+|++...++++++.++ +.+||+..+.. ..... ++. .++.|+|++
T Consensus 94 ~~~~~~~g~~~---~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~---~~l~~-~~~--~~~~~spDG- 161 (582)
T 3o4h_A 94 KVNTSRPGEEQ---RLEAV-KPMRILSGVDTGEAVVFTGATEDR-VALYALDGGGL---RELAR-LPG--FGFVSDIRG- 161 (582)
T ss_dssp EEETTSTTCCE---ECTTS-CSBEEEEEEECSSCEEEEEECSSC-EEEEEEETTEE---EEEEE-ESS--CEEEEEEET-
T ss_pred EEeccCCCccc---cccCC-CCceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcE---EEeec-CCC--ceEEECCCC-
Confidence 6543 22211 22222 234567888887556666666555 45999976522 12222 222 788999997
Q ss_pred CCceecccccCCCceeEEeecC----CcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCC--c
Q 036510 163 PGALVGSGFLDPVQKLCSGGCD----NTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG--K 236 (288)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~--~ 236 (288)
+.+++++.| ..|.+||+.++. ...+..|...+.+++||||+ ++|+++..|+ .
T Consensus 162 -------------~~la~~~~~~~~~~~i~~~d~~~g~-----~~~l~~~~~~~~~~~~SpDG----~~l~~~~~~~~~~ 219 (582)
T 3o4h_A 162 -------------DLIAGLGFFGGGRVSLFTSNLSSGG-----LRVFDSGEGSFSSASISPGM----KVTAGLETAREAR 219 (582)
T ss_dssp -------------TEEEEEEEEETTEEEEEEEETTTCC-----CEEECCSSCEEEEEEECTTS----CEEEEEECSSCEE
T ss_pred -------------CEEEEEEEcCCCCeEEEEEcCCCCC-----ceEeecCCCccccceECCCC----CEEEEccCCCeeE
Confidence 678877766 679999987763 22456788889999999984 6788888888 8
Q ss_pred EEEEEeecCCCcccceEeeccccCeEEEE--------eecCCCEEEEEeCCCcEEEeEc
Q 036510 237 VIIWTVAREGDQWEGKVLHDFKTPVYRVS--------WSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 237 i~iw~~~~~~~~~~~~~~~~~~~~i~~~~--------~spdg~~l~s~~~d~~v~~w~~ 287 (288)
|++||+.... . ..+..+...+..++ |+|||+++++++.|++++||++
T Consensus 220 i~~~d~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 220 LVTVDPRDGS-V---EDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEECTTTCC-E---EECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred EEEEcCCCCc-E---EEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 9999876432 1 24444444455555 9999999999999999999974
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.86 E-value=1.4e-20 Score=178.29 Aligned_cols=239 Identities=10% Similarity=0.118 Sum_probs=164.2
Q ss_pred ceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCce
Q 036510 13 TVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEW 92 (288)
Q Consensus 13 ~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~ 92 (288)
.|.+++|||||++|++++. +.|++||+..+....+..+..|...+..++|+|+ |++|++++. +.|.+||+.++..
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPD--G~~la~~~~-~~i~~~d~~~g~~- 184 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPK--GGFVSFIRG-RNLWVIDLASGRQ- 184 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTT--SSEEEEEET-TEEEEEETTTTEE-
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCC--CCEEEEEeC-CcEEEEecCCCCE-
Confidence 4788999999999999887 8999999865410134556778888999999975 899998875 6999999876431
Q ss_pred EEeEEeecCCCc----------------eeEEEeccCCCCeEEEEEeCCC------------------------------
Q 036510 93 IKDHVFEDHKSS----------------VNSIDWAPHELGLCLACGSSDG------------------------------ 126 (288)
Q Consensus 93 ~~~~~~~~h~~~----------------v~~l~~~p~~~~~~l~sg~~d~------------------------------ 126 (288)
......+... +.++.|+|+ +..+++++.|+
T Consensus 185 --~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpD--g~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~ 260 (741)
T 2ecf_A 185 --MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPD--DSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDAN 260 (741)
T ss_dssp --EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTT--SSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCC
T ss_pred --EEeccCCccceeccccceeeeeccccccceEECCC--CCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCC
Confidence 1222222221 478999998 55667776554
Q ss_pred ---cEEEEeecC-CCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeec-----CCcEEEEEEeCCce
Q 036510 127 ---NISVFTARA-DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGC-----DNTVKVWKLYNGIW 197 (288)
Q Consensus 127 ---~i~i~d~~~-~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~-----d~~i~iwd~~~~~~ 197 (288)
.|++||+.. +.. ........|...+.++.| |++ +.|+.++. +..|.+||+.++..
T Consensus 261 ~~~~l~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~-pDg--------------~~l~~~~~~~~~~~~~i~~~d~~~g~~ 324 (741)
T 2ecf_A 261 VQVKLGVISPAEQAQT-QWIDLGKEQDIYLARVNW-RDP--------------QHLSFQRQSRDQKKLDLVEVTLASNQQ 324 (741)
T ss_dssp CEEEEEEECSSTTCCC-EEECCCSCSSEEEEEEEE-EET--------------TEEEEEEEETTSSEEEEEEEETTTCCE
T ss_pred CeeEEEEEECCCCCce-EEecCCCCcceEEEEEEe-CCC--------------CEEEEEEecccCCeEEEEEEECCCCce
Confidence 788888876 432 111111146667899999 987 55554432 56799999877632
Q ss_pred eeeeeeccccCCc----ceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEE-EeecCCCE
Q 036510 198 KMDCFPALQMHTD----WVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRV-SWSLTGNI 272 (288)
Q Consensus 198 ~~~~~~~~~~h~~----~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~-~~spdg~~ 272 (288)
...+..+.. .+.++.|+|++ +++++++.|+.++||.+..... ...+..+...+..+ .|+|||+.
T Consensus 325 ----~~~~~~~~~~~~~~~~~~~~spdg----~~~~~~~~~g~~~l~~~~~~~~---~~~l~~~~~~v~~~~~~s~dg~~ 393 (741)
T 2ecf_A 325 ----RVLAHETSPTWVPLHNSLRFLDDG----SILWSSERTGFQHLYRIDSKGK---AAALTHGNWSVDELLAVDEKAGL 393 (741)
T ss_dssp ----EEEEEEECSSCCCCCSCCEECTTS----CEEEEECTTSSCEEEEECSSSC---EEESCCSSSCEEEEEEEETTTTE
T ss_pred ----EEEEEcCCCCcCCcCCceEECCCC----eEEEEecCCCccEEEEEcCCCC---eeeeeecceEEEeEeEEeCCCCE
Confidence 222223322 34688999984 5788899999999998764322 23444555667777 69999998
Q ss_pred EEEEeC-CC--cEEEeEc
Q 036510 273 LAVADG-NN--NVTLWEE 287 (288)
Q Consensus 273 l~s~~~-d~--~v~~w~~ 287 (288)
|+..+. ++ +++||++
T Consensus 394 l~~~~~~~~~~~~~l~~~ 411 (741)
T 2ecf_A 394 AYFRAGIESARESQIYAV 411 (741)
T ss_dssp EEEEECSSCTTCBEEEEE
T ss_pred EEEEEeCCCCceEEEEEE
Confidence 765544 44 8999984
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=6.2e-21 Score=180.09 Aligned_cols=242 Identities=11% Similarity=0.060 Sum_probs=158.8
Q ss_pred cceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEecccc---CeEEEEecCCCCCCEEEEeeCC---------C
Q 036510 12 DTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKG---AVWEVAWAHPKFGSILASCSFD---------G 79 (288)
Q Consensus 12 ~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~l~s~s~d---------~ 79 (288)
..+.+++|+|||+++++ +.|++|++||+..+ +....+.+|.. .|..++||++ |++|++++.+ +
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g--~~~~~~~~~~~~~~~v~~~~~SpD--g~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETN--TSTVLIEGKKIESLRAIRYEISPD--REYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGC--CCEEEECTTTTTTTTCSEEEECTT--SSEEEEEESCCCCSSSCCCS
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCC--cEEEEeccccccccccceEEECCC--CCEEEEEecCccceeeccee
Confidence 34677899999997766 78999999998644 44555666665 4899999975 8999999875 7
Q ss_pred cEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCC---------
Q 036510 80 TVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPV--------- 150 (288)
Q Consensus 80 ~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~--------- 150 (288)
.+.+||+.++.. ........|...+..++|+|+ +..++.++. +.|++|++..+.... ....+..
T Consensus 92 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPd--G~~la~~~~-~~i~~~~~~~g~~~~---~~~~~~~~~~~~g~~~ 164 (723)
T 1xfd_A 92 YYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPK--GQQLIFIFE-NNIYYCAHVGKQAIR---VVSTGKEGVIYNGLSD 164 (723)
T ss_dssp EEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSS--TTCEEEEET-TEEEEESSSSSCCEE---EECCCBTTTEEEEECC
T ss_pred eEEEEECCCCce-EeccCCccccccccccEECCC--CCEEEEEEC-CeEEEEECCCCceEE---EecCCCCCceECcccc
Confidence 788999977653 111222245555899999998 556777765 789999987654322 2222222
Q ss_pred ---------CeeEEEeCCCCCCCceecccccCCCceeEEeecCC----------------------------------cE
Q 036510 151 ---------GVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDN----------------------------------TV 187 (288)
Q Consensus 151 ---------~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~----------------------------------~i 187 (288)
.+.++.|+|++ +.|+.++.|+ .|
T Consensus 165 ~v~~ee~~~~~~~~~~SpDg--------------~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l 230 (723)
T 1xfd_A 165 WLYEEEILKTHIAHWWSPDG--------------TRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISL 230 (723)
T ss_dssp HHHHHTTSSSSEEEEECTTS--------------SEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEE
T ss_pred eeEEEEeccCcceEEECCCC--------------CEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEE
Confidence 23789999998 4455544332 78
Q ss_pred EEEEEeCCceeeee--eeccccCCcceEEEEecCCCCCCCcEEEEEeC----CCcEEEEEeecCCCcccceEeec-cccC
Q 036510 188 KVWKLYNGIWKMDC--FPALQMHTDWVRDVAWAPNLGLPKSTIASASE----DGKVIIWTVAREGDQWEGKVLHD-FKTP 260 (288)
Q Consensus 188 ~iwd~~~~~~~~~~--~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~----D~~i~iw~~~~~~~~~~~~~~~~-~~~~ 260 (288)
++||+.++...... ...+..|...+.++.|+||+ ++|++.+. +..|++||+...+. ...... +...
T Consensus 231 ~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg----~~l~~~~~~~~~~~~i~~~d~~~g~~---~~~~~~~~~~~ 303 (723)
T 1xfd_A 231 HVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATST----KVAVTWLNRAQNVSILTLCDATTGVC---TKKHEDESEAW 303 (723)
T ss_dssp EEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSS----EEEEEEEETTSCEEEEEEEETTTCCE---EEEEEEECSSC
T ss_pred EEEECCCCceeEEeeCCccCCCccceeEEEEEeCCC----eEEEEEEcCCCCeEEEEEEeCCCCcc---eEEEEeccCCE
Confidence 89998775311111 01122346789999999984 56766643 35799999764321 122222 2233
Q ss_pred e----EEEEeecCCCEEEEE--eCCC------cEEEeE
Q 036510 261 V----YRVSWSLTGNILAVA--DGNN------NVTLWE 286 (288)
Q Consensus 261 i----~~~~~spdg~~l~s~--~~d~------~v~~w~ 286 (288)
+ ..++|||||+.|+.. ..++ .|.+||
T Consensus 304 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 304 LHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp CCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred EeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 3 378999999987754 4566 455565
No 144
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.86 E-value=1.1e-18 Score=149.30 Aligned_cols=239 Identities=10% Similarity=0.041 Sum_probs=156.2
Q ss_pred EEcCCCCE-EEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEE-eeCCCcEEEeecCCCCceEEe
Q 036510 18 AMDYYGKR-LATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILAS-CSFDGTVIIWKEGNSNEWIKD 95 (288)
Q Consensus 18 ~~s~~g~~-l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s-~s~d~~v~iwd~~~~~~~~~~ 95 (288)
.|.+++++ +++++.+++|++||...+ +.+..+..+...+ .++|+++ +++++. +..++.|.+||..++.. ..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~-~~~~s~d--g~~l~~~~~~~~~i~~~d~~~~~~--~~ 76 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTL--EILNQITLGYDFV-DTAITSD--CSNVVVTSDFCQTLVQIETQLEPP--KV 76 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTC--CEEEEEECCCCEE-EEEECSS--SCEEEEEESTTCEEEEEECSSSSC--EE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCccc--ceeeeEEccCCcc-eEEEcCC--CCEEEEEeCCCCeEEEEECCCCce--eE
Confidence 45665544 788888999999998543 4555666666666 9999865 665554 44589999999976653 13
Q ss_pred EEeecCCCceeEEEeccCCCCeEEEEEeCC-C--cEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceeccccc
Q 036510 96 HVFEDHKSSVNSIDWAPHELGLCLACGSSD-G--NISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFL 172 (288)
Q Consensus 96 ~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d-~--~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~ 172 (288)
..+..+..+..+++|+|+ +.+++++..+ + .|.+||+..+... .... +......+.|+|++.
T Consensus 77 ~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~~i~v~d~~~~~~~---~~~~-~~~~~~~~~~spdg~---------- 140 (331)
T 3u4y_A 77 VAIQEGQSSMADVDITPD--DQFAVTVTGLNHPFNMQSYSFLKNKFI---STIP-IPYDAVGIAISPNGN---------- 140 (331)
T ss_dssp EEEEECSSCCCCEEECTT--SSEEEECCCSSSSCEEEEEETTTTEEE---EEEE-CCTTEEEEEECTTSS----------
T ss_pred EecccCCCCccceEECCC--CCEEEEecCCCCcccEEEEECCCCCeE---EEEE-CCCCccceEECCCCC----------
Confidence 445556666666999998 5555555444 3 8999998765322 1122 234568999999972
Q ss_pred CCCceeEEeecCCc-EEEEEEeCCceeeee-eeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCccc
Q 036510 173 DPVQKLCSGGCDNT-VKVWKLYNGIWKMDC-FPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWE 250 (288)
Q Consensus 173 ~~~~~l~s~~~d~~-i~iwd~~~~~~~~~~-~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~ 250 (288)
.++++...++. |.+|++......... ...+ .+......+.|+|++ ..+++++..++.|++||+........
T Consensus 141 ---~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg---~~l~v~~~~~~~v~v~d~~~~~~~~~ 213 (331)
T 3u4y_A 141 ---GLILIDRSSANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDG---NFAFVANLIGNSIGILETQNPENITL 213 (331)
T ss_dssp ---CEEEEEETTTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTS---SEEEEEETTTTEEEEEECSSTTSCEE
T ss_pred ---EEEEEecCCCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCC---CEEEEEeCCCCeEEEEECCCCcccce
Confidence 34556666688 999998753211111 1111 233447899999985 22456666799999999875432100
Q ss_pred ceEeeccccCeEEEEeecCCCEEEEEe-CCCcEEEeEc
Q 036510 251 GKVLHDFKTPVYRVSWSLTGNILAVAD-GNNNVTLWEE 287 (288)
Q Consensus 251 ~~~~~~~~~~i~~~~~spdg~~l~s~~-~d~~v~~w~~ 287 (288)
...+. ....+..++|+|||+++++++ .++.|.+||.
T Consensus 214 ~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 214 LNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp EEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred eeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence 12222 235678899999999776665 4788999985
No 145
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.85 E-value=1.4e-18 Score=149.46 Aligned_cols=244 Identities=7% Similarity=-0.027 Sum_probs=161.8
Q ss_pred cccceEEEEEcCCCCEEEEeeC-------CCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCC-EEEEeeCCCcE
Q 036510 10 HEDTVHDVAMDYYGKRLATASS-------DYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGS-ILASCSFDGTV 81 (288)
Q Consensus 10 h~~~v~~~~~s~~g~~l~s~~~-------d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~s~d~~v 81 (288)
....+..++|+|+|++|+.++. ++.|.+||.... +.+..+.. ...+..++|+++ ++ ++++...++.|
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~--~~~~~~~~-~~~~~~~~~s~d--g~~l~v~~~~~~~v 113 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL--EVTQAIHN-DLKPFGATINNT--TQTLWFGNTVNSAV 113 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC--CEEEEEEE-SSCCCSEEEETT--TTEEEEEETTTTEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC--eEEEEEec-CCCcceEEECCC--CCEEEEEecCCCEE
Confidence 3456788999999998888774 567999987543 44555543 334678899865 66 56677778999
Q ss_pred EEeecCCCCceEEeEEeecCCC---------ceeEEEeccCCCCeEEEEE-eCCCcEEEEeecCCCCeeeEEeeccCCCC
Q 036510 82 IIWKEGNSNEWIKDHVFEDHKS---------SVNSIDWAPHELGLCLACG-SSDGNISVFTARADGGWDTSRIDQAHPVG 151 (288)
Q Consensus 82 ~iwd~~~~~~~~~~~~~~~h~~---------~v~~l~~~p~~~~~~l~sg-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 151 (288)
.+||..++.. ...+..+.. .+.++.|+|++ ..+++++ +.++.|.+||...... ......+...
T Consensus 114 ~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~ 186 (353)
T 3vgz_A 114 TAIDAKTGEV---KGRLVLDDRKRTEEVRPLQPRELVADDAT-NTVYISGIGKESVIWVVDGGNIKL---KTAIQNTGKM 186 (353)
T ss_dssp EEEETTTCCE---EEEEESCCCCCCSSCCCCEEEEEEEETTT-TEEEEEEESSSCEEEEEETTTTEE---EEEECCCCTT
T ss_pred EEEeCCCCee---EEEEecCCCccccccCCCCCceEEECCCC-CEEEEEecCCCceEEEEcCCCCce---EEEecCCCCc
Confidence 9999977652 233433322 26889999984 3334444 4578999999876432 2222224445
Q ss_pred eeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEE
Q 036510 152 VTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA 231 (288)
Q Consensus 152 v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~ 231 (288)
+..+.|+|++ +.++.++.++.|.+||+.++...........++...+.++.|+|++ ...+++.
T Consensus 187 ~~~~~~s~dg--------------~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg---~~l~~~~ 249 (353)
T 3vgz_A 187 STGLALDSEG--------------KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTAR---QRAFITD 249 (353)
T ss_dssp CCCCEEETTT--------------TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTT---TEEEEEE
T ss_pred cceEEECCCC--------------CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCC---CEEEEEe
Confidence 6778888887 6677788899999999877632111111112355668899999985 2244444
Q ss_pred eCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEe-CCCcEEEeEc
Q 036510 232 SEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVAD-GNNNVTLWEE 287 (288)
Q Consensus 232 s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~-~d~~v~~w~~ 287 (288)
..++.|.+||+...+. ...+. ... ...++|+|||+++++++ .++.|.+||.
T Consensus 250 ~~~~~v~~~d~~~~~~---~~~~~-~~~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 250 SKAAEVLVVDTRNGNI---LAKVA-APE-SLAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp SSSSEEEEEETTTCCE---EEEEE-CSS-CCCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCCEEEEEECCCCcE---EEEEE-cCC-CceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 5569999999865321 11111 122 25699999999766665 6899999995
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.85 E-value=2.8e-19 Score=168.47 Aligned_cols=246 Identities=14% Similarity=0.140 Sum_probs=162.9
Q ss_pred ccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCC-----CCceeeEEEeccccC--------------eEEEEecCCCCC
Q 036510 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGN-----NTSQHLAKLSGHKGA--------------VWEVAWAHPKFG 69 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~-----~~~~~~~~~~~h~~~--------------v~~~~~~~~~~~ 69 (288)
.|...+.+++|+|||++|+.+ .|+.|++|++.. + +.......+... +.++.|+++ |
T Consensus 118 ~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g--~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpD--g 192 (706)
T 2z3z_A 118 DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMS--RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPK--G 192 (706)
T ss_dssp CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCC--CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTT--S
T ss_pred CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCC--CcEEeccCCCCCeEcccchhhhhcCCCceEEECCC--C
Confidence 456678889999999999984 789999999865 3 223223333332 478999875 8
Q ss_pred CEEEEee---------------------------------CCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCC
Q 036510 70 SILASCS---------------------------------FDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELG 116 (288)
Q Consensus 70 ~~l~s~s---------------------------------~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 116 (288)
++|++++ .+..|.+||+.++.. ........|...+.+++|+|+ +
T Consensus 193 ~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~spd--g 269 (706)
T 2z3z_A 193 SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT-VYLQTGEPKEKFLTNLSWSPD--E 269 (706)
T ss_dssp SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE-EECCCCSCTTCEEEEEEECTT--S
T ss_pred CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce-EeeccCCCCceeEeeEEEECC--C
Confidence 9999888 457899999876542 111111246677999999998 5
Q ss_pred eEEEEEeCCC-----cEEEEeecCCCCeeeEEeeccCCC---CeeEEEeCC--CCCCCceecccccCCCceeEEeecCCc
Q 036510 117 LCLACGSSDG-----NISVFTARADGGWDTSRIDQAHPV---GVTSVSWAP--STAPGALVGSGFLDPVQKLCSGGCDNT 186 (288)
Q Consensus 117 ~~l~sg~~d~-----~i~i~d~~~~~~~~~~~~~~~~~~---~v~~i~~~p--~~~~~~~~~~~~~~~~~~l~s~~~d~~ 186 (288)
..+++++.++ .|.+||+.++....... ...+.. .+..+.|+| ++ +++++++.|+.
T Consensus 270 ~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~~sp~~dg--------------~~l~~~~~~g~ 334 (706)
T 2z3z_A 270 NILYVAEVNRAQNECKVNAYDAETGRFVRTLF-VETDKHYVEPLHPLTFLPGSNN--------------QFIWQSRRDGW 334 (706)
T ss_dssp SEEEEEEECTTSCEEEEEEEETTTCCEEEEEE-EEECSSCCCCCSCCEECTTCSS--------------EEEEEECTTSS
T ss_pred CEEEEEEeCCCCCeeEEEEEECCCCceeeEEE-EccCCCeECccCCceeecCCCC--------------EEEEEEccCCc
Confidence 6667666665 89999987652222211 112221 245678998 76 67888899999
Q ss_pred EEEEEEeCCceeeeeeeccccCCcceEE-EEecCCCCCCCcEEEEE-eCCC--cEEEEEeecCCCcccceEeeccccCeE
Q 036510 187 VKVWKLYNGIWKMDCFPALQMHTDWVRD-VAWAPNLGLPKSTIASA-SEDG--KVIIWTVAREGDQWEGKVLHDFKTPVY 262 (288)
Q Consensus 187 i~iwd~~~~~~~~~~~~~~~~h~~~V~~-v~~sp~~~~~~~~l~s~-s~D~--~i~iw~~~~~~~~~~~~~~~~~~~~i~ 262 (288)
++||++.... ..+..+..|...|.+ +.|+|++ +.|+.+ +.++ .++||.+...... ...+. +...+.
T Consensus 335 ~~l~~~~~~~---~~~~~l~~~~~~v~~~~~~spdg----~~l~~~~~~~~~~~~~l~~~d~~~~~--~~~l~-~~~~~~ 404 (706)
T 2z3z_A 335 NHLYLYDTTG---RLIRQVTKGEWEVTNFAGFDPKG----TRLYFESTEASPLERHFYCIDIKGGK--TKDLT-PESGMH 404 (706)
T ss_dssp CEEEEEETTS---CEEEECCCSSSCEEEEEEECTTS----SEEEEEESSSCTTCBEEEEEETTCCC--CEESC-CSSSEE
T ss_pred cEEEEEECCC---CEEEecCCCCeEEEeeeEEcCCC----CEEEEEecCCCCceEEEEEEEcCCCC--ceecc-CCCceE
Confidence 9999987321 233455667777776 7999985 455544 4454 3555554432211 12222 345688
Q ss_pred EEEeecCCCEEEEEeCC----CcEEEeEc
Q 036510 263 RVSWSLTGNILAVADGN----NNVTLWEE 287 (288)
Q Consensus 263 ~~~~spdg~~l~s~~~d----~~v~~w~~ 287 (288)
+++|||||++|+.+..+ +.|++||.
T Consensus 405 ~~~~spdg~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 405 RTQLSPDGSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp EEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred EEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence 99999999998877544 45999985
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=1.7e-19 Score=170.24 Aligned_cols=252 Identities=11% Similarity=0.076 Sum_probs=157.2
Q ss_pred ccccccc---ceEEEEEcCCCCEEEEeeCC---------CcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEE
Q 036510 6 IETGHED---TVHDVAMDYYGKRLATASSD---------YSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILA 73 (288)
Q Consensus 6 ~~~~h~~---~v~~~~~s~~g~~l~s~~~d---------~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 73 (288)
++.+|.. .|.+++|||||++|++++.+ +.+++||+..+....+....+|...+..++|||+ |+.|+
T Consensus 52 ~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPd--G~~la 129 (723)
T 1xfd_A 52 LIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPK--GQQLI 129 (723)
T ss_dssp EECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSS--TTCEE
T ss_pred EeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCC--CCEEE
Confidence 3345544 48999999999999999875 6788999865433233333455556888999975 88999
Q ss_pred EeeCCCcEEEeecCCCCceEEeEEeecCCCc------------------eeEEEeccCCCCeEEEEEeCCC---------
Q 036510 74 SCSFDGTVIIWKEGNSNEWIKDHVFEDHKSS------------------VNSIDWAPHELGLCLACGSSDG--------- 126 (288)
Q Consensus 74 s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~------------------v~~l~~~p~~~~~~l~sg~~d~--------- 126 (288)
+++. +.|++|++..+... .....+... +.+++|+|+ +..|++++.|+
T Consensus 130 ~~~~-~~i~~~~~~~g~~~---~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpD--g~~la~~~~~~~~~~~~~~~ 203 (723)
T 1xfd_A 130 FIFE-NNIYYCAHVGKQAI---RVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPD--GTRLAYAAINDSRVPIMELP 203 (723)
T ss_dssp EEET-TEEEEESSSSSCCE---EEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTT--SSEEEEEEEECTTSCEEEEC
T ss_pred EEEC-CeEEEEECCCCceE---EEecCCCCCceECcccceeEEEEeccCcceEEECCC--CCEEEEEEECCCccceEEee
Confidence 9887 79999998765431 222222322 378999998 56667665442
Q ss_pred -------------------------cEEEEeecCCCCeeeEEe---eccCCCCeeEEEeCCCCCCCceecccccCCCcee
Q 036510 127 -------------------------NISVFTARADGGWDTSRI---DQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKL 178 (288)
Q Consensus 127 -------------------------~i~i~d~~~~~~~~~~~~---~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l 178 (288)
.|++||+..+........ ...+...+.++.|+|++ +++
T Consensus 204 ~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg--------------~~l 269 (723)
T 1xfd_A 204 TYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATST--------------KVA 269 (723)
T ss_dssp CCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSS--------------EEE
T ss_pred ccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCC--------------eEE
Confidence 788888876532111110 01124568899999987 556
Q ss_pred EEeec----CCcEEEEEEeCCceeeeeeecc-ccCCcceE----EEEecCCCCCCCcEEEE--EeCCC----c--EEEEE
Q 036510 179 CSGGC----DNTVKVWKLYNGIWKMDCFPAL-QMHTDWVR----DVAWAPNLGLPKSTIAS--ASEDG----K--VIIWT 241 (288)
Q Consensus 179 ~s~~~----d~~i~iwd~~~~~~~~~~~~~~-~~h~~~V~----~v~~sp~~~~~~~~l~s--~s~D~----~--i~iw~ 241 (288)
++.+. +..|.+||+.++.. ...+ ..+..++. .+.|+|++ ++|+. ...|+ . |.+||
T Consensus 270 ~~~~~~~~~~~~i~~~d~~~g~~----~~~~~~~~~~~~~~~~~~~~~spdg----~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 270 VTWLNRAQNVSILTLCDATTGVC----TKKHEDESEAWLHRQNEEPVFSKDG----RKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp EEEEETTSCEEEEEEEETTTCCE----EEEEEEECSSCCCCCCCCCEECTTS----CSEEEEEEECCSSSSCEEEEEEEC
T ss_pred EEEEcCCCCeEEEEEEeCCCCcc----eEEEEeccCCEEeccCCCceEcCCC----CeEEEEEecccCCCcceeEEEEEe
Confidence 55432 35689999877632 1222 22344443 78999985 44554 45677 4 55555
Q ss_pred eecCCCcccceEeeccccCeEE-EEeecCCCEEEEEeCC---CcEEEeEc
Q 036510 242 VAREGDQWEGKVLHDFKTPVYR-VSWSLTGNILAVADGN---NNVTLWEE 287 (288)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~i~~-~~~spdg~~l~s~~~d---~~v~~w~~ 287 (288)
+...+.......+......+.. ++|+|||+.|+..+.+ +.++||++
T Consensus 342 ~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 391 (723)
T 1xfd_A 342 SQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSA 391 (723)
T ss_dssp SSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEE
T ss_pred ccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEE
Confidence 2121110001222222233444 6999999999877665 78999985
No 148
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=3.3e-18 Score=149.06 Aligned_cols=251 Identities=11% Similarity=0.086 Sum_probs=157.3
Q ss_pred cceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccc--cCeEEEEecCCCCCCE--EEEee-----------
Q 036510 12 DTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHK--GAVWEVAWAHPKFGSI--LASCS----------- 76 (288)
Q Consensus 12 ~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~--l~s~s----------- 76 (288)
..+..++|+|+|++|++++.+ +|.+|+++. .++...... |. +....++|+++ |+. +++++
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~-~g~~~~~~~-~~~~g~~~~~~~spd--g~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKS-PTEIVHEAS-HPIGGHPRANDADTN--TRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEE-TTEEEEEEE-EECCSSGGGGCTTSC--CEEEEEEECSSTTCCEEEEEE
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECC-CCCEEEeeE-eecCCCCccEEECCC--CCEEEEEEecCCcceecccee
Confidence 356789999999999999988 999999851 223332221 11 23455788764 773 45553
Q ss_pred --CCCcEEEeecCCCCceE-EeEEee-cCCCceeEEEeccCCCCeEEEEEe-CCCcEEEEeecCCCCeeeEEeec--cCC
Q 036510 77 --FDGTVIIWKEGNSNEWI-KDHVFE-DHKSSVNSIDWAPHELGLCLACGS-SDGNISVFTARADGGWDTSRIDQ--AHP 149 (288)
Q Consensus 77 --~d~~v~iwd~~~~~~~~-~~~~~~-~h~~~v~~l~~~p~~~~~~l~sg~-~d~~i~i~d~~~~~~~~~~~~~~--~~~ 149 (288)
.++++.+|++....... ....+. .+...+.+++|+|+ ++++++++ .++.|++|++...+......... .|.
T Consensus 115 ~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spd--G~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g 192 (365)
T 1jof_A 115 YKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPT--ETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPG 192 (365)
T ss_dssp SSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTT--SSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTT
T ss_pred ecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCC--CCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCC
Confidence 68999999986422221 111111 24567899999998 45455544 46799999997222222222222 235
Q ss_pred CCeeEEEeCCCCCCCceecccccCCCceeEEee-cCCcEEEEEEeC--Ccee--eeeeecc----ccCCc------ceEE
Q 036510 150 VGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGG-CDNTVKVWKLYN--GIWK--MDCFPAL----QMHTD------WVRD 214 (288)
Q Consensus 150 ~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~iwd~~~--~~~~--~~~~~~~----~~h~~------~V~~ 214 (288)
..+..+.|+|++ ++++.++ .++.|.+|++.. +... ...+..+ .+|.. .+..
T Consensus 193 ~~p~~~~~spdg--------------~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 258 (365)
T 1jof_A 193 DHPRWVAMHPTG--------------NYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRAD 258 (365)
T ss_dssp CCEEEEEECTTS--------------SEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEE
T ss_pred CCCCEeEECCCC--------------CEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccccccccccc
Confidence 568899999997 5565555 478999999863 3211 1112222 23332 5889
Q ss_pred EE-ecCCCCCCCcEEEEEeC-CC-----cEEEEEeecCCCcccce-EeeccccCeEEEEeec---CCCEEEEEeCC-CcE
Q 036510 215 VA-WAPNLGLPKSTIASASE-DG-----KVIIWTVAREGDQWEGK-VLHDFKTPVYRVSWSL---TGNILAVADGN-NNV 282 (288)
Q Consensus 215 v~-~sp~~~~~~~~l~s~s~-D~-----~i~iw~~~~~~~~~~~~-~~~~~~~~i~~~~~sp---dg~~l~s~~~d-~~v 282 (288)
+. |+|++ ++|++++. ++ +|++|++...+...... ....+...+..++|+| ||++|++++.+ ++|
T Consensus 259 i~~~spdG----~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v 334 (365)
T 1jof_A 259 VCALTFSG----KYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWL 334 (365)
T ss_dssp EEEECTTS----SEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEE
T ss_pred EEEECCCC----CEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeE
Confidence 99 99985 56655553 33 89999986322111100 1222334466789999 89999999875 899
Q ss_pred EEeEc
Q 036510 283 TLWEE 287 (288)
Q Consensus 283 ~~w~~ 287 (288)
+||++
T Consensus 335 ~v~~~ 339 (365)
T 1jof_A 335 EIYRW 339 (365)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99985
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.84 E-value=1.7e-19 Score=177.19 Aligned_cols=235 Identities=10% Similarity=0.029 Sum_probs=176.5
Q ss_pred cccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEec-----------cccCeEEEEec-CCCCCCEEEEe
Q 036510 8 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSG-----------HKGAVWEVAWA-HPKFGSILASC 75 (288)
Q Consensus 8 ~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~-----------h~~~v~~~~~~-~~~~~~~l~s~ 75 (288)
.+|. .+...+|+|+|++|+.+ .++.|++|+... ..+..+.+ |...+..++|+ ++ |+.|+++
T Consensus 242 ~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~---~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pd--G~~la~~ 314 (1045)
T 1k32_A 242 TSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDT---EKIEKIEIGDLESPEDRIISIPSKFAEDFSPLD--GDLIAFV 314 (1045)
T ss_dssp CCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTT---CCEEECCCCCCCBCCSEEEECGGGGEEEEEECG--GGCEEEE
T ss_pred cCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCc---eEeeeeccCcccccccccccccccceeeecCCC--CCEEEEE
Confidence 3444 35667999999988887 488999998732 22334444 44578899998 75 8888888
Q ss_pred eCCCcEEEeecCCCCceEEeEEeecCCC-ceeEEEeccCCCCeEEEEEeCCCcEE-EEeecCCCCeeeEEeeccCCCCee
Q 036510 76 SFDGTVIIWKEGNSNEWIKDHVFEDHKS-SVNSIDWAPHELGLCLACGSSDGNIS-VFTARADGGWDTSRIDQAHPVGVT 153 (288)
Q Consensus 76 s~d~~v~iwd~~~~~~~~~~~~~~~h~~-~v~~l~~~p~~~~~~l~sg~~d~~i~-i~d~~~~~~~~~~~~~~~~~~~v~ 153 (288)
+ ++.+.+|+...+. ...+..|.. .+..++|+ + +..++.++.++.+. +|++..+. . .....|...+.
T Consensus 315 ~-~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~s-d--g~~l~~~s~~~~l~~~~d~~~~~-~---~~l~~~~~~~~ 382 (1045)
T 1k32_A 315 S-RGQAFIQDVSGTY----VLKVPEPLRIRYVRRGGD-T--KVAFIHGTREGDFLGIYDYRTGK-A---EKFEENLGNVF 382 (1045)
T ss_dssp E-TTEEEEECTTSSB----EEECSCCSCEEEEEECSS-S--EEEEEEEETTEEEEEEEETTTCC-E---EECCCCCCSEE
T ss_pred E-cCEEEEEcCCCCc----eEEccCCCcceEEeeeEc-C--CCeEEEEECCCceEEEEECCCCC-c---eEecCCcccee
Confidence 7 7899999986543 223556777 89999999 6 66777777788888 88876532 1 22236777899
Q ss_pred EEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeC
Q 036510 154 SVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASE 233 (288)
Q Consensus 154 ~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~ 233 (288)
.+.|+|++ +.|++++.++.|++||+.++. ....+.+|...|.++.|+|++ ++|++++.
T Consensus 383 ~~~~SpDG--------------~~la~~~~~~~v~~~d~~tg~----~~~~~~~~~~~v~~~~~SpDG----~~la~~~~ 440 (1045)
T 1k32_A 383 AMGVDRNG--------------KFAVVANDRFEIMTVDLETGK----PTVIERSREAMITDFTISDNS----RFIAYGFP 440 (1045)
T ss_dssp EEEECTTS--------------SEEEEEETTSEEEEEETTTCC----EEEEEECSSSCCCCEEECTTS----CEEEEEEE
T ss_pred eeEECCCC--------------CEEEEECCCCeEEEEECCCCc----eEEeccCCCCCccceEECCCC----CeEEEEec
Confidence 99999997 789999999999999998763 223345788889999999984 67888876
Q ss_pred CC----------cEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 234 DG----------KVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 234 D~----------~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
++ .|++||+.... ...+..+...+..++|+|||++|+.++.++..++|+.
T Consensus 441 ~~~~~~~~~~~~~i~l~d~~~g~----~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 441 LKHGETDGYVMQAIHVYDMEGRK----IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp ECSSTTCSCCEEEEEEEETTTTE----EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred CccccccCCCCCeEEEEECCCCc----EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcch
Confidence 54 89999986421 2334455667889999999999999999888888863
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.84 E-value=4.3e-19 Score=152.42 Aligned_cols=235 Identities=11% Similarity=0.065 Sum_probs=153.0
Q ss_pred EEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccc-cCeEEEEecCCCCCC-EEEEeeCCCcEEEeecCCCCceE
Q 036510 16 DVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHK-GAVWEVAWAHPKFGS-ILASCSFDGTVIIWKEGNSNEWI 93 (288)
Q Consensus 16 ~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~-~l~s~s~d~~v~iwd~~~~~~~~ 93 (288)
+++++++++++++++.+++|++||... ++.+..+..+. ..+..++|+++ ++ ++++...++.|.+||+.++.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~s~d--g~~~~v~~~~~~~i~~~d~~t~~--- 76 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVAS--DTVYKSCVMPDKFGPGTAMMAPD--NRTAYVLNNHYGDIYGIDLDTCK--- 76 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTT--TEEEEEEECSSCCSSCEEEECTT--SSEEEEEETTTTEEEEEETTTTE---
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCC--CcEEEEEecCCCCCCceeEECCC--CCEEEEEeCCCCcEEEEeCCCCc---
Confidence 356788889999999999999999854 35566665443 24678999865 66 45666789999999987654
Q ss_pred EeEEeecC------CCceeEEEeccCCCCeEEEEEeCC------------CcEEEEeecCCCCeeeEEeeccCCCCeeEE
Q 036510 94 KDHVFEDH------KSSVNSIDWAPHELGLCLACGSSD------------GNISVFTARADGGWDTSRIDQAHPVGVTSV 155 (288)
Q Consensus 94 ~~~~~~~h------~~~v~~l~~~p~~~~~~l~sg~~d------------~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 155 (288)
....+..+ ...+.+++|+|+ +.++++++.+ +.|.+||+.++......... .++..+.++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~ 153 (349)
T 1jmx_B 77 NTFHANLSSVPGEVGRSMYSFAISPD--GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF-PMPRQVYLM 153 (349)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTT--SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE-ECCSSCCCE
T ss_pred EEEEEEcccccccccccccceEECCC--CCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec-cCCCcccce
Confidence 22233322 223788999998 5566666654 89999998763211111111 234468888
Q ss_pred EeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeec-------------------------------
Q 036510 156 SWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPA------------------------------- 204 (288)
Q Consensus 156 ~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~------------------------------- 204 (288)
.|+|++ + ++.++ +.|.+||+.++.........
T Consensus 154 ~~s~dg--------------~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (349)
T 1jmx_B 154 RAADDG--------------S-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTI 216 (349)
T ss_dssp EECTTS--------------C-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEE
T ss_pred eECCCC--------------c-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeee
Confidence 999987 4 33333 33888887655311110000
Q ss_pred ---------------------------------cccCCcceEEEEecC-CCCCCCcEEEEEeCCCcEEEEEeecCCCccc
Q 036510 205 ---------------------------------LQMHTDWVRDVAWAP-NLGLPKSTIASASEDGKVIIWTVAREGDQWE 250 (288)
Q Consensus 205 ---------------------------------~~~h~~~V~~v~~sp-~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~ 250 (288)
+..+...+.++.|+| ++ ++++++ ++.|.+||+...+ .
T Consensus 217 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg----~~l~~~--~~~v~~~d~~~~~---~ 287 (349)
T 1jmx_B 217 ARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP----NQIYGV--LNRLAKYDLKQRK---L 287 (349)
T ss_dssp EEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCT----TEEEEE--ESEEEEEETTTTE---E
T ss_pred eecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCC----CEEEEE--cCeEEEEECccCe---E
Confidence 000112355677888 74 566666 8899999986431 1
Q ss_pred ceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 251 GKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 251 ~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
...+ .....+..++|+|||++|++++.++.|++||.
T Consensus 288 ~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~ 323 (349)
T 1jmx_B 288 IKAA-NLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNP 323 (349)
T ss_dssp EEEE-ECSSCCCEEEECSSSSCEEEESBSSEEEEEET
T ss_pred EEEE-cCCCCccceEECCCCCEEEEecCCCeEEEEec
Confidence 1111 22345778999999999999888999999995
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=9.5e-18 Score=144.60 Aligned_cols=232 Identities=11% Similarity=0.104 Sum_probs=148.8
Q ss_pred CCCcEEEEEeCCCCceeeE-EEeccccCeEEEEecCCCCCCEEEEeeC--CCcEEEeecCCCCceEEeEEeecCCCceeE
Q 036510 31 SDYSIKIIGVGNNTSQHLA-KLSGHKGAVWEVAWAHPKFGSILASCSF--DGTVIIWKEGNSNEWIKDHVFEDHKSSVNS 107 (288)
Q Consensus 31 ~d~~i~lwd~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~l~s~s~--d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~ 107 (288)
.++.+.+|.++..+++... ....+......++|+++ |++++++.. ++.|.+|++..+. ......+..+...+..
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spd--g~l~~~~~~~~~~~v~~~~~~~g~-~~~~~~~~~~~~~p~~ 90 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAK--DCLYSVDKEDDEGGIAAWQIDGQT-AHKLNTVVAPGTPPAY 90 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTT--CEEEEEEEETTEEEEEEEEEETTE-EEEEEEEEEESCCCSE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccC--CeEEEEEecCCCceEEEEEecCCc-EEEeeeeecCCCCCEE
Confidence 4567899988754444322 33445566778999875 664444432 7999999995543 2233334446678899
Q ss_pred EEeccCCCCeEEEEEe-CCCcEEEEeecCCCCeeeEEeecc---------CCCCeeEEEeCCCCCCCceecccccCCCce
Q 036510 108 IDWAPHELGLCLACGS-SDGNISVFTARADGGWDTSRIDQA---------HPVGVTSVSWAPSTAPGALVGSGFLDPVQK 177 (288)
Q Consensus 108 l~~~p~~~~~~l~sg~-~d~~i~i~d~~~~~~~~~~~~~~~---------~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~ 177 (288)
++|+|+ +.++++++ .++.|.+|++...+.......... +...+.++.|+|++ ++
T Consensus 91 ~a~spd--g~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg--------------~l 154 (347)
T 3hfq_A 91 VAVDEA--RQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDN--------------RL 154 (347)
T ss_dssp EEEETT--TTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTS--------------CE
T ss_pred EEECCC--CCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCC--------------cE
Confidence 999998 45555555 789999999975443332222111 11247789999987 56
Q ss_pred eEEeecCCcEEEEEEe-CCceeeeeeeccccC-CcceEEEEecCCCCCCCc-EEEEEeCCCcEEEEEeecCCCcc-cceE
Q 036510 178 LCSGGCDNTVKVWKLY-NGIWKMDCFPALQMH-TDWVRDVAWAPNLGLPKS-TIASASEDGKVIIWTVAREGDQW-EGKV 253 (288)
Q Consensus 178 l~s~~~d~~i~iwd~~-~~~~~~~~~~~~~~h-~~~V~~v~~sp~~~~~~~-~l~s~s~D~~i~iw~~~~~~~~~-~~~~ 253 (288)
+++...++.|.+||+. ++. +.....+..+ ......+.|+|++ + ++++...++.|++|++....... ....
T Consensus 155 ~v~~~~~~~v~~~~~~~~g~--~~~~~~~~~~~g~~p~~~~~spdg----~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~ 228 (347)
T 3hfq_A 155 AVIDLGSDKVYVYNVSDAGQ--LSEQSVLTMEAGFGPRHLVFSPDG----QYAFLAGELSSQIASLKYDTQTGAFTQLGI 228 (347)
T ss_dssp EEEETTTTEEEEEEECTTSC--EEEEEEEECCTTCCEEEEEECTTS----SEEEEEETTTTEEEEEEEETTTTEEEEEEE
T ss_pred EEEeCCCCEEEEEEECCCCc--EEEeeeEEcCCCCCCceEEECCCC----CEEEEEeCCCCEEEEEEecCCCCceEEeee
Confidence 6777778899999998 332 1222222222 2246789999985 4 45556678999999987522111 1111
Q ss_pred eeccc------cCeEEEEeecCCCEEE-EEeCCCcEEEeEc
Q 036510 254 LHDFK------TPVYRVSWSLTGNILA-VADGNNNVTLWEE 287 (288)
Q Consensus 254 ~~~~~------~~i~~~~~spdg~~l~-s~~~d~~v~~w~~ 287 (288)
+.... ..+..++|+|||++|+ +...+++|.+|++
T Consensus 229 ~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~ 269 (347)
T 3hfq_A 229 VKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAV 269 (347)
T ss_dssp EESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEE
T ss_pred eeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEE
Confidence 12111 3478899999999874 4556899999995
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=4.6e-19 Score=167.06 Aligned_cols=233 Identities=13% Similarity=0.132 Sum_probs=157.9
Q ss_pred cceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCC---
Q 036510 12 DTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGN--- 88 (288)
Q Consensus 12 ~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~--- 88 (288)
..|.+++|+|| ++++.+ .|+++++||+..+ + ...+..|...+..++|+|+ |+.|+++ .|+.|++|++.+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~--~-~~~l~~~~~~~~~~~~Spd--G~~la~~-~~~~i~v~~~~~~~~ 153 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLAR--K-VTYLFDTNEETASLDFSPV--GDRVAYV-RNHNLYIARGGKLGE 153 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTT--E-EEEEECCTTCCTTCEECTT--SSEEEEE-ETTEEEEEECBCTTS
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCC--c-eEEccCCcccccCCcCCCC--CCEEEEE-ECCeEEEEecCcccc
Confidence 56899999999 555544 4699999998543 2 3445567777888999875 8888884 689999999976
Q ss_pred --CCceEEeEEeecCCCc--------------eeEEEeccCCCCeEEEEEe-----------------------------
Q 036510 89 --SNEWIKDHVFEDHKSS--------------VNSIDWAPHELGLCLACGS----------------------------- 123 (288)
Q Consensus 89 --~~~~~~~~~~~~h~~~--------------v~~l~~~p~~~~~~l~sg~----------------------------- 123 (288)
+.. ......+... +.++.|+|+ +..+++++
T Consensus 154 ~~g~~---~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpD--g~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~ 228 (706)
T 2z3z_A 154 GMSRA---IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPK--GSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMA 228 (706)
T ss_dssp CCCCC---EESCSCCBTTEEESSCCGGGCTTCCCSEEECTT--SSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBT
T ss_pred cCCCc---EEeccCCCCCeEcccchhhhhcCCCceEEECCC--CCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCC
Confidence 542 1112222222 589999998 56677776
Q ss_pred ----CCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCC-----cEEEEEEeC
Q 036510 124 ----SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDN-----TVKVWKLYN 194 (288)
Q Consensus 124 ----~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~ 194 (288)
.+..|++||+..+.. ........|...+.++.|+|++ +.|++++.++ .|.+||+.+
T Consensus 229 g~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~spdg--------------~~l~~~~~~~~~~~~~v~~~d~~~ 293 (706)
T 2z3z_A 229 GTPSHHVTVGIYHLATGKT-VYLQTGEPKEKFLTNLSWSPDE--------------NILYVAEVNRAQNECKVNAYDAET 293 (706)
T ss_dssp TSCCCEEEEEEEETTTTEE-EECCCCSCTTCEEEEEEECTTS--------------SEEEEEEECTTSCEEEEEEEETTT
T ss_pred CCCCCeeEEEEEECCCCce-EeeccCCCCceeEeeEEEECCC--------------CEEEEEEeCCCCCeeEEEEEECCC
Confidence 446799999875421 1111112456678999999997 6677777665 899999877
Q ss_pred CceeeeeeeccccCCc---ceEEEEecC--CCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEE-EEeec
Q 036510 195 GIWKMDCFPALQMHTD---WVRDVAWAP--NLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYR-VSWSL 268 (288)
Q Consensus 195 ~~~~~~~~~~~~~h~~---~V~~v~~sp--~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~-~~~sp 268 (288)
+..... +.. ..+.. .+.++.|+| ++ ++|++++.|+.+++|.+..... ....+..+...+.. ++|+|
T Consensus 294 g~~~~~-~~~-~~~~~~~~~~~~~~~sp~~dg----~~l~~~~~~g~~~l~~~~~~~~--~~~~l~~~~~~v~~~~~~sp 365 (706)
T 2z3z_A 294 GRFVRT-LFV-ETDKHYVEPLHPLTFLPGSNN----QFIWQSRRDGWNHLYLYDTTGR--LIRQVTKGEWEVTNFAGFDP 365 (706)
T ss_dssp CCEEEE-EEE-EECSSCCCCCSCCEECTTCSS----EEEEEECTTSSCEEEEEETTSC--EEEECCCSSSCEEEEEEECT
T ss_pred CceeeE-EEE-ccCCCeECccCCceeecCCCC----EEEEEEccCCccEEEEEECCCC--EEEecCCCCeEEEeeeEEcC
Confidence 621111 111 12222 246789999 74 6888899999999999873221 12334444556766 79999
Q ss_pred CCCEEEEEeCCC
Q 036510 269 TGNILAVADGNN 280 (288)
Q Consensus 269 dg~~l~s~~~d~ 280 (288)
||+.|+.++.++
T Consensus 366 dg~~l~~~~~~~ 377 (706)
T 2z3z_A 366 KGTRLYFESTEA 377 (706)
T ss_dssp TSSEEEEEESSS
T ss_pred CCCEEEEEecCC
Confidence 999887766543
No 153
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.82 E-value=9.5e-18 Score=144.30 Aligned_cols=233 Identities=12% Similarity=0.116 Sum_probs=154.8
Q ss_pred cceEEEEEcCCCCEE-EEeeCCCcEEEEEeCCCCceeeEEEeccccC---------eEEEEecCCCCCCEEEEee--CCC
Q 036510 12 DTVHDVAMDYYGKRL-ATASSDYSIKIIGVGNNTSQHLAKLSGHKGA---------VWEVAWAHPKFGSILASCS--FDG 79 (288)
Q Consensus 12 ~~v~~~~~s~~g~~l-~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~---------v~~~~~~~~~~~~~l~s~s--~d~ 79 (288)
..+..++|+|+|+++ ++...++.|.+||.... +.+..+..+... +.+++|+++ ++.++.++ .++
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~ 164 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTG--EVKGRLVLDDRKRTEEVRPLQPRELVADDA--TNTVYISGIGKES 164 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTC--CEEEEEESCCCCCCSSCCCCEEEEEEEETT--TTEEEEEEESSSC
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCC--eeEEEEecCCCccccccCCCCCceEEECCC--CCEEEEEecCCCc
Confidence 345678899999855 55556799999998543 455556554322 688999865 66555544 589
Q ss_pred cEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEe-eccCCCCeeEEEeC
Q 036510 80 TVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRI-DQAHPVGVTSVSWA 158 (288)
Q Consensus 80 ~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~v~~i~~~ 158 (288)
.|.+||..+.. ....+..+...+.++.|+|+ +..+++++.++.|.+||..++........ ..++...+..+.|+
T Consensus 165 ~i~~~d~~~~~---~~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s 239 (353)
T 3vgz_A 165 VIWVVDGGNIK---LKTAIQNTGKMSTGLALDSE--GKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLD 239 (353)
T ss_dssp EEEEEETTTTE---EEEEECCCCTTCCCCEEETT--TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEE
T ss_pred eEEEEcCCCCc---eEEEecCCCCccceEEECCC--CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEEC
Confidence 99999987654 33445445556889999998 55677778899999999876532222111 11244457789999
Q ss_pred CCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEE
Q 036510 159 PSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVI 238 (288)
Q Consensus 159 p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~ 238 (288)
|++. .++++...++.|.+||..++. .+..+..+.. ..+.|+|++ ...+++...++.|.
T Consensus 240 ~dg~-------------~l~~~~~~~~~v~~~d~~~~~----~~~~~~~~~~--~~~~~s~dg---~~l~v~~~~~~~v~ 297 (353)
T 3vgz_A 240 TARQ-------------RAFITDSKAAEVLVVDTRNGN----ILAKVAAPES--LAVLFNPAR---NEAYVTHRQAGKVS 297 (353)
T ss_dssp TTTT-------------EEEEEESSSSEEEEEETTTCC----EEEEEECSSC--CCEEEETTT---TEEEEEETTTTEEE
T ss_pred CCCC-------------EEEEEeCCCCEEEEEECCCCc----EEEEEEcCCC--ceEEECCCC---CEEEEEECCCCeEE
Confidence 9872 344455556899999987763 2222222221 568999985 23556666799999
Q ss_pred EEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCC
Q 036510 239 IWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGN 279 (288)
Q Consensus 239 iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d 279 (288)
+||+...+ ....+ .....+..++|+|||++|+++..+
T Consensus 298 ~~d~~~~~---~~~~~-~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 298 VIDAKSYK---VVKTF-DTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEETTTTE---EEEEE-ECCSEEEEEEECTTSCEEEEEEEC
T ss_pred EEECCCCe---EEEEE-ecCCCCCeEEEcCCCCEEEEEEcc
Confidence 99986431 11122 223467899999999987777654
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.82 E-value=6.5e-18 Score=144.15 Aligned_cols=225 Identities=12% Similarity=0.118 Sum_probs=144.7
Q ss_pred CEEEEeeCCCcEEEEEeCCCCceeeEEEeccc-c-CeEEEEecCCCCCC-EEEEeeCCCcEEEeecCCCCceEEeEEeec
Q 036510 24 KRLATASSDYSIKIIGVGNNTSQHLAKLSGHK-G-AVWEVAWAHPKFGS-ILASCSFDGTVIIWKEGNSNEWIKDHVFED 100 (288)
Q Consensus 24 ~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~-~-~v~~~~~~~~~~~~-~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~ 100 (288)
++|++++.+++|++||... ++.+..+.... . .+..++|+++ ++ ++++++.++.|.+||+.++.. ...+..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~~s~d--g~~l~v~~~~~~~v~~~d~~~~~~---~~~~~~ 74 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEK--MAVDKVITIADAGPTPMVPMVAPG--GRIAYATVNKSESLVKIDLVTGET---LGRIDL 74 (337)
T ss_dssp EEEEEEETTTEEEEEETTT--TEEEEEEECTTCTTCCCCEEECTT--SSEEEEEETTTTEEEEEETTTCCE---EEEEEC
T ss_pred cEEEEcCCCCeEEEEECCC--CcEEEEEEcCCCCCCccceEEcCC--CCEEEEEeCCCCeEEEEECCCCCe---EeeEEc
Confidence 4789999999999999854 35565555322 1 4778999865 65 456777889999999876552 222321
Q ss_pred -C----CCceeEEEeccCCCCeEEEEEe------------CCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCC
Q 036510 101 -H----KSSVNSIDWAPHELGLCLACGS------------SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163 (288)
Q Consensus 101 -h----~~~v~~l~~~p~~~~~~l~sg~------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~ 163 (288)
+ ...+.+++|+|+ +..+++++ .++.|.+||+..+... .... ....+..+.|+|++.
T Consensus 75 ~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~---~~~~-~~~~~~~~~~s~dg~- 147 (337)
T 1pby_B 75 STPEERVKSLFGAALSPD--GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR---KAFE-APRQITMLAWARDGS- 147 (337)
T ss_dssp CBTTEEEECTTCEEECTT--SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE---EEEE-CCSSCCCEEECTTSS-
T ss_pred CCcccccccccceEECCC--CCEEEEEecccccccccccccCceEEEEECCCCcEE---EEEe-CCCCcceeEECCCCC-
Confidence 1 125778999998 44555554 5799999998754321 1111 234567788999873
Q ss_pred CceecccccCCCceeEEeecCCcEEEEEEeCCceee--------------------------------------------
Q 036510 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKM-------------------------------------------- 199 (288)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-------------------------------------------- 199 (288)
+|+.+ ++.|.+||+.++....
T Consensus 148 -------------~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 212 (337)
T 1pby_B 148 -------------KLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPA 212 (337)
T ss_dssp -------------CEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTT
T ss_pred -------------EEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccc
Confidence 23332 3445555443321000
Q ss_pred -----------------ee-eeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCe
Q 036510 200 -----------------DC-FPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPV 261 (288)
Q Consensus 200 -----------------~~-~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i 261 (288)
+. ...+..+...+.++.|+|++ ++++++ |+.|++||+...+ ....+ .....+
T Consensus 213 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg----~~l~~~--~~~v~~~d~~~~~---~~~~~-~~~~~~ 282 (337)
T 1pby_B 213 DPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAK----TRAFGA--YNVLESFDLEKNA---SIKRV-PLPHSY 282 (337)
T ss_dssp SGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTS----SEEEEE--ESEEEEEETTTTE---EEEEE-ECSSCC
T ss_pred cccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCC----CEEEEe--CCeEEEEECCCCc---Cccee-cCCCce
Confidence 00 11122344456789999984 567666 7899999986431 11121 223467
Q ss_pred EEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 262 YRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 262 ~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
.+++|+|||++|++++.++.|++||.
T Consensus 283 ~~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 283 YSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp CEEEECTTSCEEEEESBSSEEEEEET
T ss_pred eeEEECCCCCEEEEEcCCCcEEEEEC
Confidence 89999999999999999999999995
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.81 E-value=5.7e-18 Score=166.43 Aligned_cols=241 Identities=7% Similarity=-0.011 Sum_probs=170.3
Q ss_pred cccccc-ceEEEEEcCCCCEEEEeeCCCcEE-EEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEe
Q 036510 7 ETGHED-TVHDVAMDYYGKRLATASSDYSIK-IIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW 84 (288)
Q Consensus 7 ~~~h~~-~v~~~~~s~~g~~l~s~~~d~~i~-lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iw 84 (288)
+..|.. .+..++|+ +|+.|+.++.+..+. +|++.... ...+.+|...+..++|+++ |++|++++.++.+++|
T Consensus 332 ~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~---~~~l~~~~~~~~~~~~SpD--G~~la~~~~~~~v~~~ 405 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK---AEKFEENLGNVFAMGVDRN--GKFAVVANDRFEIMTV 405 (1045)
T ss_dssp CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC---EEECCCCCCSEEEEEECTT--SSEEEEEETTSEEEEE
T ss_pred ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC---ceEecCCccceeeeEECCC--CCEEEEECCCCeEEEE
Confidence 345666 88999999 999999999888787 88875432 3344588889999999875 8999999999999999
Q ss_pred ecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC----------CcEEEEeecCCCCeeeEEeeccCCCCeeE
Q 036510 85 KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD----------GNISVFTARADGGWDTSRIDQAHPVGVTS 154 (288)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d----------~~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 154 (288)
|+.++. ....+..|...+.+++|+|+ +.++++++.+ +.|++||+..+. ......|...+..
T Consensus 406 d~~tg~---~~~~~~~~~~~v~~~~~SpD--G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~----~~~l~~~~~~~~~ 476 (1045)
T 1k32_A 406 DLETGK---PTVIERSREAMITDFTISDN--SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK----IFAATTENSHDYA 476 (1045)
T ss_dssp ETTTCC---EEEEEECSSSCCCCEEECTT--SCEEEEEEEECSSTTCSCCEEEEEEEETTTTE----EEECSCSSSBEEE
T ss_pred ECCCCc---eEEeccCCCCCccceEECCC--CCeEEEEecCccccccCCCCCeEEEEECCCCc----EEEeeCCCcccCC
Confidence 997765 23344578889999999998 5666666554 489999987542 2344567777889
Q ss_pred EEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCce------------------e------------------
Q 036510 155 VSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIW------------------K------------------ 198 (288)
Q Consensus 155 i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~------------------~------------------ 198 (288)
+.|+|++ +.|+.++.++..++|+...... .
T Consensus 477 ~~~spdG--------------~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 542 (1045)
T 1k32_A 477 PAFDADS--------------KNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDL 542 (1045)
T ss_dssp EEECTTS--------------CEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCC
T ss_pred ceEcCCC--------------CEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccc
Confidence 9999997 5677777766666665321100 0
Q ss_pred ---eeeeeccccCCcceEEEEecCCCCCCCcEEEE-----------EeC--CCcEEEEEeecCCCcccceEeeccccCeE
Q 036510 199 ---MDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS-----------ASE--DGKVIIWTVAREGDQWEGKVLHDFKTPVY 262 (288)
Q Consensus 199 ---~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s-----------~s~--D~~i~iw~~~~~~~~~~~~~~~~~~~~i~ 262 (288)
...+..+..|...+..+.++|++ .++++ .+. +..|.+||+.... ...+. ..+.
T Consensus 543 ~g~~~~~~~l~~~~~~~~~~~~s~dg----~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~----~~~l~---~~v~ 611 (1045)
T 1k32_A 543 NDMYKRSSPINVDPGDYRMIIPLESS----ILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK----VTEVK---NNLT 611 (1045)
T ss_dssp TTGGGGCEECSCCCBCEEEEEECSSE----EEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCC----EEEEE---EEEE
T ss_pred cCHhHceEEcCCCCCChhheEEcCCC----eEEEEecccCcccccccccCCCceEEEEECCCCc----EEEee---cCcc
Confidence 00111233466778999999974 55664 123 3456666654321 12222 5688
Q ss_pred EEEeecCCCEEEEEeCCCcEEEeEcC
Q 036510 263 RVSWSLTGNILAVADGNNNVTLWEEA 288 (288)
Q Consensus 263 ~~~~spdg~~l~s~~~d~~v~~w~~~ 288 (288)
+++|||||++|++++.+ .|++||++
T Consensus 612 ~~~~S~DG~~l~~~~~~-~i~~~d~~ 636 (1045)
T 1k32_A 612 DLRLSADRKTVMVRKDD-GKIYTFPL 636 (1045)
T ss_dssp EEEECTTSCEEEEEETT-SCEEEEES
T ss_pred eEEECCCCCEEEEEcCC-cEEEEeCc
Confidence 99999999999999876 89999963
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.80 E-value=3.7e-18 Score=157.59 Aligned_cols=230 Identities=9% Similarity=0.030 Sum_probs=157.8
Q ss_pred ccccceEEEEEcCCCCEEEEeeC---CCcEEEEEeCC-CCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEe
Q 036510 9 GHEDTVHDVAMDYYGKRLATASS---DYSIKIIGVGN-NTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW 84 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l~s~~~---d~~i~lwd~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iw 84 (288)
++...|..+.|+|| +++++++. +...+||.++. ..+... .+..+. .+...+|+++.++.++++++.|+.. +|
T Consensus 62 ~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~-l~ 137 (582)
T 3o4h_A 62 EPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVA-LY 137 (582)
T ss_dssp SCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEE-EE
T ss_pred ccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCce-EE
Confidence 34468999999999 78887775 56677876643 011112 332222 2335577765444466666666655 99
Q ss_pred ecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC----CcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCC
Q 036510 85 KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD----GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160 (288)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~ 160 (288)
|+.++.. . .+..+.. .++.|+|| ++.+++++.+ +.|++||+..+.. +....|...+..+.|+|+
T Consensus 138 d~~~g~~---~-~l~~~~~--~~~~~spD--G~~la~~~~~~~~~~~i~~~d~~~g~~----~~l~~~~~~~~~~~~SpD 205 (582)
T 3o4h_A 138 ALDGGGL---R-ELARLPG--FGFVSDIR--GDLIAGLGFFGGGRVSLFTSNLSSGGL----RVFDSGEGSFSSASISPG 205 (582)
T ss_dssp EEETTEE---E-EEEEESS--CEEEEEEE--TTEEEEEEEEETTEEEEEEEETTTCCC----EEECCSSCEEEEEEECTT
T ss_pred EccCCcE---E-EeecCCC--ceEEECCC--CCEEEEEEEcCCCCeEEEEEcCCCCCc----eEeecCCCccccceECCC
Confidence 9976531 2 2222222 88999998 6777777666 6799999876532 233567777899999999
Q ss_pred CCCCceecccccCCCceeEEeecCC--cEEEEEEeCCceeeeeeeccccCCcceEEEE--------ecCCCCCCCcEEEE
Q 036510 161 TAPGALVGSGFLDPVQKLCSGGCDN--TVKVWKLYNGIWKMDCFPALQMHTDWVRDVA--------WAPNLGLPKSTIAS 230 (288)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~--------~sp~~~~~~~~l~s 230 (288)
+ +.|+++..++ .|.+||+.++. .. .+.+|...+.++. |+|++ .++++
T Consensus 206 G--------------~~l~~~~~~~~~~i~~~d~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~spdg----~~~~~ 262 (582)
T 3o4h_A 206 M--------------KVTAGLETAREARLVTVDPRDGS----VE-DLELPSKDFSSYRPTAITWLGYLPDG----RLAVV 262 (582)
T ss_dssp S--------------CEEEEEECSSCEEEEEECTTTCC----EE-ECCCSCSHHHHHCCSEEEEEEECTTS----CEEEE
T ss_pred C--------------CEEEEccCCCeeEEEEEcCCCCc----EE-EccCCCcChhhhhhccccceeEcCCC----cEEEE
Confidence 8 6788888888 89999987763 22 4566777777777 99984 68899
Q ss_pred EeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCc---EEEeE
Q 036510 231 ASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNN---VTLWE 286 (288)
Q Consensus 231 ~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~---v~~w~ 286 (288)
++.|+++++|++ . +......+.+.+++|+ ||+.+++++.+.+ +.+|+
T Consensus 263 ~~~~g~~~l~~~--g------~~~~~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 263 ARREGRSAVFID--G------ERVEAPQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp EEETTEEEEEET--T------EEECCCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred EEcCCcEEEEEE--C------CeeccCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence 999999999997 1 1112334578899999 9999999888754 55554
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.79 E-value=3.7e-18 Score=161.20 Aligned_cols=235 Identities=11% Similarity=0.057 Sum_probs=150.5
Q ss_pred EEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEecccc---CeEEEEecCCCCCCEEEEeeC---------CCcEEE
Q 036510 16 DVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKG---AVWEVAWAHPKFGSILASCSF---------DGTVII 83 (288)
Q Consensus 16 ~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~l~s~s~---------d~~v~i 83 (288)
+++|+|+|+++++ +.|++|++||+..+ +....+.+|.. .+..++||++ |++|++++. |+++++
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~SpD--g~~la~~~~~~~~~~~s~~~~i~~ 94 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETG--QSYTILSNRTMKSVNASNYGLSPD--RQFVYLESDYSKLWRYSYTATYYI 94 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSC--CEEEEECHHHHHTTTCSEEEECTT--SSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCC--cEEEEEccccccccceeeEEECCC--CCeEEEEecCceeEEeecceEEEE
Confidence 6789999965554 56999999998654 34444555544 3889999975 899998876 799999
Q ss_pred eecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCC------------
Q 036510 84 WKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVG------------ 151 (288)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~------------ 151 (288)
||+.++... ....+ ...+..++|+|+ +..++.+. ++.|++|++..+..... ...++...
T Consensus 95 ~d~~~g~~~-~~~~l---~~~~~~~~~SPD--G~~la~~~-~~~i~~~~~~~g~~~~l--~~~~~~~~v~~g~~~~v~~e 165 (719)
T 1z68_A 95 YDLSNGEFV-RGNEL---PRPIQYLCWSPV--GSKLAYVY-QNNIYLKQRPGDPPFQI--TFNGRENKIFNGIPDWVYEE 165 (719)
T ss_dssp EETTTTEEC-CSSCC---CSSBCCEEECSS--TTCEEEEE-TTEEEEESSTTSCCEEC--CCCCBTTTEEESSCCHHHHH
T ss_pred EECCCCccc-cceec---CcccccceECCC--CCEEEEEE-CCeEEEEeCCCCCcEEE--ecCCCcCCeEcccccceeee
Confidence 998765420 00112 246889999999 55667664 78999999876543211 11122221
Q ss_pred -----eeEEEeCCCCCCCceecccccCCCceeEEeecCC----------------------------------cEEEEEE
Q 036510 152 -----VTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDN----------------------------------TVKVWKL 192 (288)
Q Consensus 152 -----v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~----------------------------------~i~iwd~ 192 (288)
..++.|+|++ +.|+.++.|. .|++||+
T Consensus 166 e~~~~~~~~~wSPDG--------------~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~ 231 (719)
T 1z68_A 166 EMLATKYALWWSPNG--------------KFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDT 231 (719)
T ss_dssp HTTCSSCCEEECTTS--------------SEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEES
T ss_pred ecccCcccEEECCCC--------------CEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEEC
Confidence 2489999998 5666665542 6889998
Q ss_pred eCCce----eeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeC--CC--cEEEEE----eecCCCcccceEe----ec
Q 036510 193 YNGIW----KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASE--DG--KVIIWT----VAREGDQWEGKVL----HD 256 (288)
Q Consensus 193 ~~~~~----~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~--D~--~i~iw~----~~~~~~~~~~~~~----~~ 256 (288)
.++.. .+.....+.+|...+.++.|+||+ +++++... ++ .|.+|| +.... . ..+. ..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~----~~~~~~~~~~~~~~~l~~~d~~~~~~~g~--~-~~~~~~~~~~ 304 (719)
T 1z68_A 232 TYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDE----RVCLQWLKRVQNVSVLSICDFREDWQTWD--C-PKTQEHIEES 304 (719)
T ss_dssp SCHHHHCCEECCCCHHHHTSCEEEEEEEESSSS----EEEEEEEESSTTEEEEEEEEECSSSSSEE--C-CGGGEEEEEC
T ss_pred CCCCccceeEccCCccCCCCcceEEEeEEeCCC----eEEEEEeccccCeEEEEEEcccCCCCCCc--e-EEEEeccccc
Confidence 76531 111112345788899999999983 45655432 22 377787 43221 1 1112 23
Q ss_pred cccCeE-----EEEeecCCCEEEE--EeCCCcEEEe
Q 036510 257 FKTPVY-----RVSWSLTGNILAV--ADGNNNVTLW 285 (288)
Q Consensus 257 ~~~~i~-----~~~~spdg~~l~s--~~~d~~v~~w 285 (288)
+...+. .+.|+|||+.|+. +..++..+||
T Consensus 305 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~ 340 (719)
T 1z68_A 305 RTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIH 340 (719)
T ss_dssp SSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEE
T ss_pred CCceEccccCCccEECCCCCeEEEEEEccCCceEEE
Confidence 445555 7899999996654 4455654444
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.77 E-value=1.1e-15 Score=132.40 Aligned_cols=241 Identities=11% Similarity=0.014 Sum_probs=149.5
Q ss_pred CCCEEEEeeC----CCcEEEEEeCCCCce--eeEEEeccccCeEEEEecCCCCCCEEEEeeCC----CcEEEeecCCC-C
Q 036510 22 YGKRLATASS----DYSIKIIGVGNNTSQ--HLAKLSGHKGAVWEVAWAHPKFGSILASCSFD----GTVIIWKEGNS-N 90 (288)
Q Consensus 22 ~g~~l~s~~~----d~~i~lwd~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d----~~v~iwd~~~~-~ 90 (288)
...+++.|++ ++.|.+|.++...++ .+... |......++|+++ +++|++++.+ +.+.+|++... .
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spd--g~~l~~~~~~~~~~~~v~~~~~~~~~g 87 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSAD--GKFVYSVNEFSKDQAAVSAFAFDKEKG 87 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTT--SSEEEEEECCSSTTCEEEEEEEETTTT
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCC--CCEEEEEEccCCCCCcEEEEEEeCCCC
Confidence 3445666643 578999988644333 23333 6677788999865 8888888876 89999988653 3
Q ss_pred ceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEE---eecc--------CCCCeeEEEeCC
Q 036510 91 EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSR---IDQA--------HPVGVTSVSWAP 159 (288)
Q Consensus 91 ~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~---~~~~--------~~~~v~~i~~~p 159 (288)
..........+......+++ ++ ..++++...++.|.+|++...+...... ...+ +...+.++.|+|
T Consensus 88 ~~~~~~~~~~~~~~p~~~~~--dg-~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp 164 (361)
T 3scy_A 88 TLHLLNTQKTMGADPCYLTT--NG-KNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP 164 (361)
T ss_dssp EEEEEEEEECSSSCEEEEEE--CS-SEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT
T ss_pred cEEEeeEeccCCCCcEEEEE--CC-CEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC
Confidence 33233334444556677777 42 3444555578899999997543322111 1111 122357899999
Q ss_pred CCCCCceecccccCCCceeEEeecCCcEEEEEEeCCce----e-eee----eeccccCCcceEEEEecCCCCCCCcEEEE
Q 036510 160 STAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIW----K-MDC----FPALQMHTDWVRDVAWAPNLGLPKSTIAS 230 (288)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~----~-~~~----~~~~~~h~~~V~~v~~sp~~~~~~~~l~s 230 (288)
++. .+++++..++.|.+|++..... . +.. ......+......+.|+|++ ++++.
T Consensus 165 dg~-------------~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg----~~l~v 227 (361)
T 3scy_A 165 DGK-------------YLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDG----KFAYL 227 (361)
T ss_dssp TSS-------------EEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTS----SEEEE
T ss_pred CCC-------------EEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCC----CEEEE
Confidence 872 2455666688999999975421 1 110 01112233457899999985 55655
Q ss_pred Ee-CCCcEEEEEeecCCCcccceEeec---cccCeEEEEeecCCCEEEEEeCC--CcEEEeEc
Q 036510 231 AS-EDGKVIIWTVAREGDQWEGKVLHD---FKTPVYRVSWSLTGNILAVADGN--NNVTLWEE 287 (288)
Q Consensus 231 ~s-~D~~i~iw~~~~~~~~~~~~~~~~---~~~~i~~~~~spdg~~l~s~~~d--~~v~~w~~ 287 (288)
++ .++.|.+|++.... ......+.. .......++|+|||++|+++..+ ++|++|++
T Consensus 228 ~~~~~~~v~v~~~~~g~-~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~ 289 (361)
T 3scy_A 228 INEIGGTVIAFRYADGM-LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKV 289 (361)
T ss_dssp EETTTCEEEEEEEETTE-EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEE
T ss_pred EcCCCCeEEEEEecCCc-eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEE
Confidence 55 69999999987321 111111111 12346799999999998777654 89999985
No 159
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.77 E-value=3.1e-17 Score=155.75 Aligned_cols=256 Identities=11% Similarity=0.050 Sum_probs=153.2
Q ss_pred cceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccC-----eEEEEecCCCCCCEEEEeeCC--------
Q 036510 12 DTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGA-----VWEVAWAHPKFGSILASCSFD-------- 78 (288)
Q Consensus 12 ~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~~~l~s~s~d-------- 78 (288)
.....++|+|||++|+++ |++|++|++..+ +....+.+|... ...+.|||+ |++|+.++.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Spd--g~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYG--NSSVFLENSTFDEFGHSINDYSISPD--GQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTC--CEEEEECTTTTTTCCSCCCEEEECTT--SSEEEEEEEEEECSSSCE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCC--ceEEEEechhhhhhcccccceEECCC--CCEEEEEECCeeeEEEcc
Confidence 345678999999988886 999999998644 445556777643 234778875 8999998887
Q ss_pred -CcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCC-------
Q 036510 79 -GTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPV------- 150 (288)
Q Consensus 79 -~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~------- 150 (288)
+.+.+||+.++. ...+..|...+...+|+|| +..+|.+ .++.|++|++..+...... ..++..
T Consensus 91 ~~~~~~~d~~~~~----~~~l~~~~~~~~~~~~SPd--G~~la~~-~~~~i~~~~~~~~~~~~lt--~~g~~~~~~~g~~ 161 (740)
T 4a5s_A 91 TASYDIYDLNKRQ----LITEERIPNNTQWVTWSPV--GHKLAYV-WNNDIYVKIEPNLPSYRIT--WTGKEDIIYNGIT 161 (740)
T ss_dssp EEEEEEEETTTTE----ECCSSCCCTTEEEEEECSS--TTCEEEE-ETTEEEEESSTTSCCEECC--SCCBTTTEEESBC
T ss_pred ceEEEEEECCCCc----EEEcccCCCcceeeEECCC--CCEEEEE-ECCeEEEEECCCCceEEEc--CCCCccceecCcc
Confidence 556699997654 2335567778999999999 5556666 4789999998765432211 112211
Q ss_pred ----------CeeEEEeCCCCCCCceecccccCCCce-e-------------------EEeecC--CcEEEEEEeC---C
Q 036510 151 ----------GVTSVSWAPSTAPGALVGSGFLDPVQK-L-------------------CSGGCD--NTVKVWKLYN---G 195 (288)
Q Consensus 151 ----------~v~~i~~~p~~~~~~~~~~~~~~~~~~-l-------------------~s~~~d--~~i~iwd~~~---~ 195 (288)
....+.|||++...+....+...-... + ..|..+ ..|++||+.+ +
T Consensus 162 ~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~ 241 (740)
T 4a5s_A 162 DWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSV 241 (740)
T ss_dssp CHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSS
T ss_pred cccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCC
Confidence 123588999984211111000000000 0 001111 1477788776 5
Q ss_pred c--eeeeee--eccccCCcceEEEEecCCCCCCCcEEEEEe----CCCcEEEEEeecCCC---cc-cceEe-eccccCeE
Q 036510 196 I--WKMDCF--PALQMHTDWVRDVAWAPNLGLPKSTIASAS----EDGKVIIWTVAREGD---QW-EGKVL-HDFKTPVY 262 (288)
Q Consensus 196 ~--~~~~~~--~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s----~D~~i~iw~~~~~~~---~~-~~~~~-~~~~~~i~ 262 (288)
. ...+.. ..+.+|...+..+.|+||+ +.++... .+..|++||+..... +. ....+ .++..+|.
T Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~wspdg----~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~ 317 (740)
T 4a5s_A 242 TNATSIQITAPASMLIGDHYLCDVTWATQE----RISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVG 317 (740)
T ss_dssp SCCCEEEECCCHHHHTSCEEEEEEEEEETT----EEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSS
T ss_pred CcceEEEecCCccCCCCCeEEEEEEEeCCC----eEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEc
Confidence 1 111111 0122488889999999985 4455443 234799999876430 00 11111 22334443
Q ss_pred -----EEEeecCCCEEE-EEeC-CC--cEEEeE
Q 036510 263 -----RVSWSLTGNILA-VADG-NN--NVTLWE 286 (288)
Q Consensus 263 -----~~~~spdg~~l~-s~~~-d~--~v~~w~ 286 (288)
...|+|||+.|+ ..+. +| .|.+|+
T Consensus 318 ~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~ 350 (740)
T 4a5s_A 318 RFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQ 350 (740)
T ss_dssp SSSCCCCEECTTSSEEEEEEECTTSCEEEEEEE
T ss_pred cCcCCCceEcCCCCEEEEEEEcCCCceEEEEEE
Confidence 688999999877 6653 44 466665
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.76 E-value=1.7e-17 Score=156.62 Aligned_cols=238 Identities=12% Similarity=0.164 Sum_probs=151.0
Q ss_pred ceEEEEEcCCCCEEEEeeC---------CCcEEEEEeCCCCceee--EEEeccccCeEEEEecCCCCCCEEEEeeCCCcE
Q 036510 13 TVHDVAMDYYGKRLATASS---------DYSIKIIGVGNNTSQHL--AKLSGHKGAVWEVAWAHPKFGSILASCSFDGTV 81 (288)
Q Consensus 13 ~v~~~~~s~~g~~l~s~~~---------d~~i~lwd~~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v 81 (288)
.|.+++|||||++|+.++. |+++++||+..+ +.+ ..+ ...+..++|||+ |+.|++++ |+.|
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g--~~~~~~~l---~~~~~~~~~SPD--G~~la~~~-~~~i 132 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG--EFVRGNEL---PRPIQYLCWSPV--GSKLAYVY-QNNI 132 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT--EECCSSCC---CSSBCCEEECSS--TTCEEEEE-TTEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC--ccccceec---CcccccceECCC--CCEEEEEE-CCeE
Confidence 3889999999999998876 789999998654 221 222 245788999975 88999886 7899
Q ss_pred EEeecCCCCceEEeEEeecCCCce-----------------eEEEeccCCCCeEEEEEeCCC------------------
Q 036510 82 IIWKEGNSNEWIKDHVFEDHKSSV-----------------NSIDWAPHELGLCLACGSSDG------------------ 126 (288)
Q Consensus 82 ~iwd~~~~~~~~~~~~~~~h~~~v-----------------~~l~~~p~~~~~~l~sg~~d~------------------ 126 (288)
++|++.++... ..+..++...| .+++|+|| +..|++++.|.
T Consensus 133 ~~~~~~~g~~~--~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPD--G~~la~~~~d~~~~~~~~~~~~~~~~~~~ 208 (719)
T 1z68_A 133 YLKQRPGDPPF--QITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPN--GKFLAYAEFNDTDIPVIAYSYYGDEQYPR 208 (719)
T ss_dssp EEESSTTSCCE--ECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTT--SSEEEEEEEECTTSCEEEEEECCSSSSCE
T ss_pred EEEeCCCCCcE--EEecCCCcCCeEcccccceeeeecccCcccEEECCC--CCEEEEEEECCCCCceEEeeccCCCCCcc
Confidence 99998765431 11112222212 58999998 66777776542
Q ss_pred ----------------cEEEEeecCCCCe---eeE--EeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecC-
Q 036510 127 ----------------NISVFTARADGGW---DTS--RIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD- 184 (288)
Q Consensus 127 ----------------~i~i~d~~~~~~~---~~~--~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d- 184 (288)
.|++||+..+... ... ....+|...+.++.|+|++ +++++....
T Consensus 209 ~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~--------------~~~~~~~~~~ 274 (719)
T 1z68_A 209 TINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDE--------------RVCLQWLKRV 274 (719)
T ss_dssp EEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSS--------------EEEEEEEESS
T ss_pred ceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCC--------------eEEEEEeccc
Confidence 6778887654210 100 1123566778999999985 555553322
Q ss_pred -C--cEEEEE----EeCCceeeeeeecc----ccCCcceE-----EEEecCCCCCCCcEEE--EEeCCCcEEEEEeecCC
Q 036510 185 -N--TVKVWK----LYNGIWKMDCFPAL----QMHTDWVR-----DVAWAPNLGLPKSTIA--SASEDGKVIIWTVAREG 246 (288)
Q Consensus 185 -~--~i~iwd----~~~~~~~~~~~~~~----~~h~~~V~-----~v~~sp~~~~~~~~l~--s~s~D~~i~iw~~~~~~ 246 (288)
+ .|.+|| ..++ ++...+ .+|..+|. .+.|+|++ +.|+ +...++..+||-.....
T Consensus 275 ~~~~~l~~~d~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg----~~l~~~~~~~~g~~~l~~~~~~~ 346 (719)
T 1z68_A 275 QNVSVLSICDFREDWQTW----DCPKTQEHIEESRTGWAGGFFVSTPVFSYDA----ISYYKIFSDKDGYKHIHYIKDTV 346 (719)
T ss_dssp TTEEEEEEEEECSSSSSE----ECCGGGEEEEECSSSCSSSSSCCCCEECTTS----SCEEEEEECTTSCEEEEEESSCS
T ss_pred cCeEEEEEEcccCCCCCC----ceEEEEecccccCCceEccccCCccEECCCC----CeEEEEEEccCCceEEEEEECCC
Confidence 2 377788 5443 223333 36777777 88999985 3333 44456654444333221
Q ss_pred CcccceEeeccccCeEEEEeecCCCEEEEEeCC-----CcEEEeEc
Q 036510 247 DQWEGKVLHDFKTPVYRVSWSLTGNILAVADGN-----NNVTLWEE 287 (288)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d-----~~v~~w~~ 287 (288)
.. ...+......+..+.++ ||+.|+..+.+ +.++||++
T Consensus 347 ~~--~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~ 389 (719)
T 1z68_A 347 EN--AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRI 389 (719)
T ss_dssp TT--CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEE
T ss_pred Cc--eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEE
Confidence 11 23333334457777778 88887777765 88999974
No 161
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.75 E-value=5.4e-15 Score=123.87 Aligned_cols=239 Identities=11% Similarity=0.088 Sum_probs=162.1
Q ss_pred ccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEe------ccccCeEEEEecCCCCCCEEEEeeC-CCcE
Q 036510 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS------GHKGAVWEVAWAHPKFGSILASCSF-DGTV 81 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~~l~s~s~-d~~v 81 (288)
+|-....+++++++|+++++...++.|.+|+.+. +.+..+. +|...+..+++..+ ++.++++... ++.|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g---~~~~~~~~~~~~~~~~~~p~~i~~~~~-~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG---RFKFQFGECGKRDSQLLYPNRVAVVRN-SGDIIVTERSPTHQI 102 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS---CEEEEECCBSSSTTCBSSEEEEEEETT-TTEEEEEECGGGCEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCC---cEEEEecccCCCcccccCceEEEEEcC-CCeEEEEcCCCCCEE
Confidence 4556788999999999999888899999998753 3344442 34567889998432 3667776643 8999
Q ss_pred EEeecCCCCceEEeEEee-cCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCC
Q 036510 82 IIWKEGNSNEWIKDHVFE-DHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPS 160 (288)
Q Consensus 82 ~iwd~~~~~~~~~~~~~~-~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~ 160 (288)
.+|+. ++. ....+. .+...+.++++.|+ +.++++...++.|.+|+.. + ..........+...+..+.++|+
T Consensus 103 ~~~d~-~g~---~~~~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~~-g-~~~~~~~~~~~~~~p~~i~~~~~ 174 (286)
T 1q7f_A 103 QIYNQ-YGQ---FVRKFGATILQHPRGVTVDNK--GRIIVVECKVMRVIIFDQN-G-NVLHKFGCSKHLEFPNGVVVNDK 174 (286)
T ss_dssp EEECT-TSC---EEEEECTTTCSCEEEEEECTT--SCEEEEETTTTEEEEECTT-S-CEEEEEECTTTCSSEEEEEECSS
T ss_pred EEECC-CCc---EEEEecCccCCCceEEEEeCC--CCEEEEECCCCEEEEEcCC-C-CEEEEeCCCCccCCcEEEEECCC
Confidence 99984 443 223332 23456889999987 5667777778899999853 2 21111111133445788999887
Q ss_pred CCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeecc--ccCCcceEEEEecCCCCCCCcEEEEEeCCC-cE
Q 036510 161 TAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPAL--QMHTDWVRDVAWAPNLGLPKSTIASASEDG-KV 237 (288)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~-~i 237 (288)
+ +++++...++.|++||.... .+..+ .++......++++|++ .++++...++ .|
T Consensus 175 g--------------~l~v~~~~~~~i~~~~~~g~-----~~~~~~~~g~~~~p~~i~~d~~G----~l~v~~~~~~~~i 231 (286)
T 1q7f_A 175 Q--------------EIFISDNRAHCVKVFNYEGQ-----YLRQIGGEGITNYPIGVGINSNG----EILIADNHNNFNL 231 (286)
T ss_dssp S--------------EEEEEEGGGTEEEEEETTCC-----EEEEESCTTTSCSEEEEEECTTC----CEEEEECSSSCEE
T ss_pred C--------------CEEEEECCCCEEEEEcCCCC-----EEEEEccCCccCCCcEEEECCCC----CEEEEeCCCCEEE
Confidence 6 66777777899999996432 22223 2333567899999974 6788887776 99
Q ss_pred EEEEeecCCCcccceEeecc--ccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 238 IIWTVAREGDQWEGKVLHDF--KTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 238 ~iw~~~~~~~~~~~~~~~~~--~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
++|+.... . ...+..+ ...+.+++++|+|+++++ +.|++|++|+.
T Consensus 232 ~~~~~~g~--~--~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~ 278 (286)
T 1q7f_A 232 TIFTQDGQ--L--ISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRY 278 (286)
T ss_dssp EEECTTSC--E--EEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEEC
T ss_pred EEECCCCC--E--EEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEc
Confidence 99985321 1 1222222 224789999999987766 67999999984
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.73 E-value=1.2e-14 Score=126.52 Aligned_cols=236 Identities=9% Similarity=0.083 Sum_probs=145.8
Q ss_pred EEEEeeCC--CcEEEEEeCCCCcee--eEEEe-ccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecC-CCCceEEeEEe
Q 036510 25 RLATASSD--YSIKIIGVGNNTSQH--LAKLS-GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEG-NSNEWIKDHVF 98 (288)
Q Consensus 25 ~l~s~~~d--~~i~lwd~~~~~~~~--~~~~~-~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~-~~~~~~~~~~~ 98 (288)
+|+.|++. +.|.+|+++..+++. +.... +....+..++|+++ +++|++++.+ .|.+|++. ++. .......
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spd--g~~l~~~~~~-~v~~~~~~~~g~-~~~~~~~ 79 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHE--RKNIYGAAMK-KWSSFAVKSPTE-IVHEASH 79 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTT--SSEEEEEEBT-EEEEEEEEETTE-EEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCC--CCEEEEEccc-eEEEEEECCCCC-EEEeeEe
Confidence 35556653 568888775433332 22221 23346778999865 8888888888 99999986 443 2111112
Q ss_pred ecCCCceeEEEeccCCCCe--EEEEEe-------------CCCcEEEEeecCCCCeeeE-Eee-ccCCCCeeEEEeCCCC
Q 036510 99 EDHKSSVNSIDWAPHELGL--CLACGS-------------SDGNISVFTARADGGWDTS-RID-QAHPVGVTSVSWAPST 161 (288)
Q Consensus 99 ~~h~~~v~~l~~~p~~~~~--~l~sg~-------------~d~~i~i~d~~~~~~~~~~-~~~-~~~~~~v~~i~~~p~~ 161 (288)
..+ +...+++|+|+ +. ++++++ .++.+.+|++...+..... ... ..+...+..+.|+|++
T Consensus 80 ~~~-g~~~~~~~spd--g~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG 156 (365)
T 1jof_A 80 PIG-GHPRANDADTN--TRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTE 156 (365)
T ss_dssp ECC-SSGGGGCTTSC--CEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTS
T ss_pred ecC-CCCccEEECCC--CCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCC
Confidence 212 23566889998 45 344443 6899999999754333211 111 1244568899999997
Q ss_pred CCCceecccccCCCceeEEee-cCCcEEEEEEe-CCceeeeeeeccc--cCCcceEEEEecCCCCCCCcEEEEEe-CCCc
Q 036510 162 APGALVGSGFLDPVQKLCSGG-CDNTVKVWKLY-NGIWKMDCFPALQ--MHTDWVRDVAWAPNLGLPKSTIASAS-EDGK 236 (288)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~s~~-~d~~i~iwd~~-~~~~~~~~~~~~~--~h~~~V~~v~~sp~~~~~~~~l~s~s-~D~~ 236 (288)
++++++. .++.|++||+. ++.. ..+..+. .|...+..+.|+|++ ++|++++ .+++
T Consensus 157 --------------~~l~~~~~~~~~v~~~~~~~~g~~--~~~~~~~~~~~g~~p~~~~~spdg----~~l~v~~~~~~~ 216 (365)
T 1jof_A 157 --------------TYLYSADLTANKLWTHRKLASGEV--ELVGSVDAPDPGDHPRWVAMHPTG----NYLYALMEAGNR 216 (365)
T ss_dssp --------------SEEEEEETTTTEEEEEEECTTSCE--EEEEEEECSSTTCCEEEEEECTTS----SEEEEEETTTTE
T ss_pred --------------CEEEEEcCCCCEEEEEEECCCCCE--EEeeeEecCCCCCCCCEeEECCCC----CEEEEEECCCCe
Confidence 5555443 46799999998 5532 2222232 234568999999984 5666666 4789
Q ss_pred EEEEEeecCCCccc--ceEeecc-------cc------CeEEEE-eecCCCEEEEEeCC-C-----cEEEeEc
Q 036510 237 VIIWTVAREGDQWE--GKVLHDF-------KT------PVYRVS-WSLTGNILAVADGN-N-----NVTLWEE 287 (288)
Q Consensus 237 i~iw~~~~~~~~~~--~~~~~~~-------~~------~i~~~~-~spdg~~l~s~~~d-~-----~v~~w~~ 287 (288)
|.+|++........ ...+... .. .+..++ |+|||++|++++.+ + +|++|++
T Consensus 217 v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~ 289 (365)
T 1jof_A 217 ICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKL 289 (365)
T ss_dssp EEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEE
T ss_pred EEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEE
Confidence 99998764211111 0111111 11 478899 99999998877643 2 8999985
No 163
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.72 E-value=5.6e-15 Score=126.76 Aligned_cols=247 Identities=12% Similarity=0.064 Sum_probs=162.8
Q ss_pred ccceEEEEEcCCCCEEEEeeCC------------------------CcEEEEEeCCCCceeeEEEe-ccccCeEEEEecC
Q 036510 11 EDTVHDVAMDYYGKRLATASSD------------------------YSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAH 65 (288)
Q Consensus 11 ~~~v~~~~~s~~g~~l~s~~~d------------------------~~i~lwd~~~~~~~~~~~~~-~h~~~v~~~~~~~ 65 (288)
-+.+.+|+++++|+++++.+.+ ++|.+||...+ +.+..+. ++......+++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA--EILQSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC--CEEEEECTTTCSSEEEEEECT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC--eEEeccCCCccCCceEEEECC
Confidence 4678999999999999988877 47888887433 3444443 4556788999975
Q ss_pred CCCCCEEEEeeCCCcEEEeecCCCCceEEeEEe---------ecCCCceeEEEeccCCCCeEEEEEe-CCCcEEEEeecC
Q 036510 66 PKFGSILASCSFDGTVIIWKEGNSNEWIKDHVF---------EDHKSSVNSIDWAPHELGLCLACGS-SDGNISVFTARA 135 (288)
Q Consensus 66 ~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~---------~~h~~~v~~l~~~p~~~~~~l~sg~-~d~~i~i~d~~~ 135 (288)
+ |+++++.+.++.|++|+....... ...+ ..+......++++|++ +.++++.+ .++.|++|+. .
T Consensus 101 ~--g~l~v~d~~~~~v~~~~~~g~~~~--~~~~~~~~~~g~~~~~~~~P~~ia~~~~~-g~lyv~d~~~~~~I~~~~~-~ 174 (329)
T 3fvz_A 101 D--GNYWVTDVALHQVFKLDPHSKEGP--LLILGRSMQPGSDQNHFCQPTDVAVEPST-GAVFVSDGYCNSRIVQFSP-S 174 (329)
T ss_dssp T--SCEEEEETTTTEEEEECTTCSSCC--SEEESBTTBCCCSTTCCSSEEEEEECTTT-CCEEEEECSSCCEEEEECT-T
T ss_pred C--CCEEEEECCCCEEEEEeCCCCeEE--EEEecccCCCCCCccccCCCcEEEEeCCC-CeEEEEeCCCCCeEEEEcC-C
Confidence 4 789999999999999997432111 1222 2344468899999942 56677775 6889999983 2
Q ss_pred CCCeeeEEee-cc--------CCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeecc-
Q 036510 136 DGGWDTSRID-QA--------HPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPAL- 205 (288)
Q Consensus 136 ~~~~~~~~~~-~~--------~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~- 205 (288)
+ .... ... .+ +-.....|.++|+. +.++++...++.|++||..++. .+..+
T Consensus 175 g-~~~~-~~~~~g~~~~~~~~~~~~p~gia~d~~~-------------g~l~v~d~~~~~I~~~~~~~G~----~~~~~~ 235 (329)
T 3fvz_A 175 G-KFVT-QWGEESSGSSPRPGQFSVPHSLALVPHL-------------DQLCVADRENGRIQCFKTDTKE----FVREIK 235 (329)
T ss_dssp S-CEEE-EECEECCSSSCCTTEESCEEEEEEETTT-------------TEEEEEETTTTEEEEEETTTCC----EEEEEC
T ss_pred C-CEEE-EeccCCCCCCCCCcccCCCcEEEEECCC-------------CEEEEEECCCCEEEEEECCCCc----EEEEEe
Confidence 2 2211 111 11 11236778888873 2677888889999999987553 22222
Q ss_pred -ccCCcceEEEEecCCCCC--CCcEEEEEeCCCcEEEEEeecCCCcccceEe---eccccCeEEEEeecCCCEEEEEeCC
Q 036510 206 -QMHTDWVRDVAWAPNLGL--PKSTIASASEDGKVIIWTVAREGDQWEGKVL---HDFKTPVYRVSWSLTGNILAVADGN 279 (288)
Q Consensus 206 -~~h~~~V~~v~~sp~~~~--~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~---~~~~~~i~~~~~spdg~~l~s~~~d 279 (288)
..+...+.++.|+|..-+ .+...++.+.+..|++|+....+. ...+ ..+...+..++++|||+++++...+
T Consensus 236 ~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~---~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~ 312 (329)
T 3fvz_A 236 HASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEI---IDVFKPVRKHFDMPHDIVASEDGTVYIGDAHT 312 (329)
T ss_dssp CTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCE---EEEECCSSSCCSSEEEEEECTTSEEEEEESSS
T ss_pred ccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeE---EEEEcCCCCccCCeeEEEECCCCCEEEEECCC
Confidence 345567889999992100 011222334455899999764321 1222 1233568899999999888888889
Q ss_pred CcEEEeEc
Q 036510 280 NNVTLWEE 287 (288)
Q Consensus 280 ~~v~~w~~ 287 (288)
+.|++|+.
T Consensus 313 ~~I~~~~~ 320 (329)
T 3fvz_A 313 NTVWKFTL 320 (329)
T ss_dssp CCEEEEEE
T ss_pred CEEEEEeC
Confidence 99999984
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.70 E-value=2.1e-15 Score=131.52 Aligned_cols=241 Identities=9% Similarity=0.027 Sum_probs=146.1
Q ss_pred ccccccceEE-----EEEcCCCCEEEEeeC-CCc--EEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCC
Q 036510 7 ETGHEDTVHD-----VAMDYYGKRLATASS-DYS--IKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFD 78 (288)
Q Consensus 7 ~~~h~~~v~~-----~~~s~~g~~l~s~~~-d~~--i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d 78 (288)
++.|...... .+|+|||++|+.++. ++. +.+||+.. ++......+|...+..+.|+++ ++.|+.++.+
T Consensus 26 lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~--g~~~~lt~~~~~~~~~~~~spd--g~~l~~~~~~ 101 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNT--QVATQLTEGRGDNTFGGFLSPD--DDALFYVKDG 101 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT--CEEEECCCSSCBCSSSCEECTT--SSEEEEEETT
T ss_pred ecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCC--CceEEeeeCCCCCccceEEcCC--CCEEEEEeCC
Confidence 3455555555 789999999998887 675 55566543 3444445566665556789875 8999999999
Q ss_pred CcEEEeecCCCCceEEeEEeecCCCceeEEEe--ccCCCCeEEEEE----------------------eCCCcEEEEeec
Q 036510 79 GTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDW--APHELGLCLACG----------------------SSDGNISVFTAR 134 (288)
Q Consensus 79 ~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~--~p~~~~~~l~sg----------------------~~d~~i~i~d~~ 134 (288)
+.+.+||+.++.. ...+..+...+....| +|+ +.+++.. ..+..|.+||+.
T Consensus 102 ~~l~~~d~~~g~~---~~~~~~~~~~~~~~~~~~~~d--g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 176 (388)
T 3pe7_A 102 RNLMRVDLATLEE---NVVYQVPAEWVGYGTWVANSD--CTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK 176 (388)
T ss_dssp TEEEEEETTTCCE---EEEEECCTTEEEEEEEEECTT--SSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT
T ss_pred CeEEEEECCCCcc---eeeeechhhcccccceeECCC--CCeeccccccCcccccccccchhhhhhccCCcceEEEEECC
Confidence 9999999987652 2233444444544444 666 4445432 234678889887
Q ss_pred CCCCeeeEEeeccCCCCeeEEEeCC-CCCCCceecccccCCCceeEEeecC------CcEEEEEEeCCceeeeeeecccc
Q 036510 135 ADGGWDTSRIDQAHPVGVTSVSWAP-STAPGALVGSGFLDPVQKLCSGGCD------NTVKVWKLYNGIWKMDCFPALQM 207 (288)
Q Consensus 135 ~~~~~~~~~~~~~~~~~v~~i~~~p-~~~~~~~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~ 207 (288)
.+.. .....+...+..+.|+| ++ +.|+..+.+ ..|.++|...+. ...+..
T Consensus 177 ~g~~----~~l~~~~~~~~~~~~sp~dg--------------~~l~~~~~~~~~~~~~~l~~~d~~~~~-----~~~l~~ 233 (388)
T 3pe7_A 177 TGES----TVILQENQWLGHPIYRPYDD--------------STVAFCHEGPHDLVDARMWLINEDGTN-----MRKVKT 233 (388)
T ss_dssp TCCE----EEEEEESSCEEEEEEETTEE--------------EEEEEEECSCTTTSSCSEEEEETTSCC-----CEESCC
T ss_pred CCce----EEeecCCccccccEECCCCC--------------CEEEEEEecCCCCCcceEEEEeCCCCc-----eEEeee
Confidence 6532 12223455688999999 76 455544432 256666654431 122333
Q ss_pred CC--cceEEEEecCCCCCCCcEEEEEeC--CC---cEEEEEeecCCCcccceEeecccc--C----eEEEEeecCCCEEE
Q 036510 208 HT--DWVRDVAWAPNLGLPKSTIASASE--DG---KVIIWTVAREGDQWEGKVLHDFKT--P----VYRVSWSLTGNILA 274 (288)
Q Consensus 208 h~--~~V~~v~~sp~~~~~~~~l~s~s~--D~---~i~iw~~~~~~~~~~~~~~~~~~~--~----i~~~~~spdg~~l~ 274 (288)
+. ..+..+.|+|++ +.|+..+. ++ .|.+||+...+. ..+..+.. . ...+.|+|||+.|+
T Consensus 234 ~~~~~~~~~~~~spdg----~~l~~~~~~~~~~~~~l~~~d~~~g~~----~~l~~~~~~~~~~~~~~~~~~spdg~~l~ 305 (388)
T 3pe7_A 234 HAEGESCTHEFWVPDG----SALVYVSYLKGSPDRFIYSADPETLEN----RQLTSMPACSHLMSNYDGSLMVGDGSDAP 305 (388)
T ss_dssp CCTTEEEEEEEECTTS----SCEEEEEEETTCCCEEEEEECTTTCCE----EEEEEECCEEEEEECTTSSEEEEEECCC-
T ss_pred CCCCcccccceECCCC----CEEEEEecCCCCCcceEEEEecCCCce----EEEEcCCCceeeeecCCCCeEccCCCcce
Confidence 33 357889999985 45655443 22 399999865321 12211111 0 11237999999888
Q ss_pred EE---------eCCCcEEEeEc
Q 036510 275 VA---------DGNNNVTLWEE 287 (288)
Q Consensus 275 s~---------~~d~~v~~w~~ 287 (288)
.. ..+..|.+||.
T Consensus 306 ~~~~~~~~~~~~~~~~i~~~d~ 327 (388)
T 3pe7_A 306 VDVQDDSGYKIENDPFLYVFNM 327 (388)
T ss_dssp -----------CCCCEEEEEET
T ss_pred eEeeeccccccCCCCEEEEEec
Confidence 64 45678999985
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.70 E-value=5.2e-16 Score=135.41 Aligned_cols=246 Identities=8% Similarity=0.008 Sum_probs=148.3
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEe----------
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASC---------- 75 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~---------- 75 (288)
+..+|...+..+.|+|||++|+.++.++.+++||+..+. ....+..+...+....|....++.+++..
T Consensus 75 lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~--~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~ 152 (388)
T 3pe7_A 75 LTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLE--ENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPL 152 (388)
T ss_dssp CCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCC--EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCC
T ss_pred eeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCc--ceeeeechhhcccccceeECCCCCeeccccccCcccccc
Confidence 444666666567899999999999999999999986543 33334445544444444212347777642
Q ss_pred ------------eCCCcEEEeecCCCCceEEeEEeecCCCceeEEEecc-CCCCeEEEEEeCC------CcEEEEeecCC
Q 036510 76 ------------SFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP-HELGLCLACGSSD------GNISVFTARAD 136 (288)
Q Consensus 76 ------------s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p-~~~~~~l~sg~~d------~~i~i~d~~~~ 136 (288)
..+..|.+||+.++.. ..+..+...+..+.|+| + +..++....+ ..|.+++....
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~d~~~g~~----~~l~~~~~~~~~~~~sp~d--g~~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (388)
T 3pe7_A 153 TDWKKFHEFYFTKPCCRLMRVDLKTGES----TVILQENQWLGHPIYRPYD--DSTVAFCHEGPHDLVDARMWLINEDGT 226 (388)
T ss_dssp CSHHHHHHHGGGCCCEEEEEEETTTCCE----EEEEEESSCEEEEEEETTE--EEEEEEEECSCTTTSSCSEEEEETTSC
T ss_pred cccchhhhhhccCCcceEEEEECCCCce----EEeecCCccccccEECCCC--CCEEEEEEecCCCCCcceEEEEeCCCC
Confidence 3457889999876542 23334566789999999 7 5555555443 36777766433
Q ss_pred CCeeeEEeeccCC--CCeeEEEeCCCCCCCceecccccCCCceeEE-eec-CC---cEEEEEEeCCceeeeeeeccccCC
Q 036510 137 GGWDTSRIDQAHP--VGVTSVSWAPSTAPGALVGSGFLDPVQKLCS-GGC-DN---TVKVWKLYNGIWKMDCFPALQMHT 209 (288)
Q Consensus 137 ~~~~~~~~~~~~~--~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s-~~~-d~---~i~iwd~~~~~~~~~~~~~~~~h~ 209 (288)
.. .....+. ..+..+.|+|++ +.|+. +.. ++ .|.+||+.++.. +.+..+.++.
T Consensus 227 ~~----~~l~~~~~~~~~~~~~~spdg--------------~~l~~~~~~~~~~~~~l~~~d~~~g~~--~~l~~~~~~~ 286 (388)
T 3pe7_A 227 NM----RKVKTHAEGESCTHEFWVPDG--------------SALVYVSYLKGSPDRFIYSADPETLEN--RQLTSMPACS 286 (388)
T ss_dssp CC----EESCCCCTTEEEEEEEECTTS--------------SCEEEEEEETTCCCEEEEEECTTTCCE--EEEEEECCEE
T ss_pred ce----EEeeeCCCCcccccceECCCC--------------CEEEEEecCCCCCcceEEEEecCCCce--EEEEcCCCce
Confidence 21 1112222 247788999998 43433 222 22 399999887642 2222222211
Q ss_pred cc---eEEEEecCCCCCCCcEEEEE---------eCCCcEEEEEeecCCCcccceEeecccc-----------CeEEEEe
Q 036510 210 DW---VRDVAWAPNLGLPKSTIASA---------SEDGKVIIWTVAREGDQWEGKVLHDFKT-----------PVYRVSW 266 (288)
Q Consensus 210 ~~---V~~v~~sp~~~~~~~~l~s~---------s~D~~i~iw~~~~~~~~~~~~~~~~~~~-----------~i~~~~~ 266 (288)
.. ...+.|+|++ ++|+.. ..+..|.+||+.... ...+..+.. .+..++|
T Consensus 287 ~~~~~~~~~~~spdg----~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~ 358 (388)
T 3pe7_A 287 HLMSNYDGSLMVGDG----SDAPVDVQDDSGYKIENDPFLYVFNMKNGT----QHRVARHDTSWKVFEGDRQVTHPHPSF 358 (388)
T ss_dssp EEEECTTSSEEEEEE----CCC------------CCCCEEEEEETTTTE----EEEEEECCCCCCCBTTBSSTTCCCCEE
T ss_pred eeeecCCCCeEccCC----CcceeEeeeccccccCCCCEEEEEeccCCc----eEEeccccCcccccccccccCCCCccC
Confidence 11 1123689985 345432 456789999986431 123333333 4678899
Q ss_pred ecCCCEEEEEe-CCCcEEEeEc
Q 036510 267 SLTGNILAVAD-GNNNVTLWEE 287 (288)
Q Consensus 267 spdg~~l~s~~-~d~~v~~w~~ 287 (288)
+|||+.|+.++ .++..+||.+
T Consensus 359 spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 359 TPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp CTTSSEEEEEECTTSSCEEEEE
T ss_pred CCCCCEEEEEecCCCceeEEEE
Confidence 99999888776 4778888863
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.66 E-value=6.4e-15 Score=137.71 Aligned_cols=248 Identities=12% Similarity=0.014 Sum_probs=159.2
Q ss_pred ccccccceEEEEEcCCCCEEEEe--eCCCcEEEEEeCCCCceeeEEEeccccCeE---------EEEecCCCCCCE-EEE
Q 036510 7 ETGHEDTVHDVAMDYYGKRLATA--SSDYSIKIIGVGNNTSQHLAKLSGHKGAVW---------EVAWAHPKFGSI-LAS 74 (288)
Q Consensus 7 ~~~h~~~v~~~~~s~~g~~l~s~--~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~---------~~~~~~~~~~~~-l~s 74 (288)
+.+|...+..++|++++-++++. +.++...||..... .....+..|...+. ...|+..++|+. |+.
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD--GAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT--SCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC--CCcceeCCCCccccccccccCCccceeeeecCCCeEEEE
Confidence 45789999999999887677777 56888999986322 23556677766665 566762124777 665
Q ss_pred eeC-CCcEEEeecC--CCCceEEeEEeec-----CCCceeEEEeccCCCCeEEEEEeCC----------CcEEEEeecCC
Q 036510 75 CSF-DGTVIIWKEG--NSNEWIKDHVFED-----HKSSVNSIDWAPHELGLCLACGSSD----------GNISVFTARAD 136 (288)
Q Consensus 75 ~s~-d~~v~iwd~~--~~~~~~~~~~~~~-----h~~~v~~l~~~p~~~~~~l~sg~~d----------~~i~i~d~~~~ 136 (288)
++. +..|.+++.. .... ...+.. |...+..++|+|+ +..+++++.+ ..|++|++...
T Consensus 97 ~~~~~~~l~~~~~~~~g~~~---~~~l~~~~~~~~~~~~~~~~~spD--g~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 171 (662)
T 3azo_A 97 THFGDQRLYAFEPDAPGGAV---PRPLTPVSAVGGGLRWADPVLLPE--RGEVWCMAEEFTGEGPSDVRRFLAAVPLDGS 171 (662)
T ss_dssp EBTTTCCEEEECTTSTTCCC---CEECSCCCCSTTCEEEEEEEEETT--TTEEEEEEEEECSSSTTCEEEEEEEEETTST
T ss_pred EECCCCeEEEEcCCCCCCCC---CEeccCCccCCCCccccCcEECCC--CCEEEEEEecccCCCCCCceeEEEEEECCCC
Confidence 543 5556665553 1022 123333 5667889999998 5566766665 57889988651
Q ss_pred -----CCeeeEEeec-cCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecC--------CcEEEEEEe-CCceeeee
Q 036510 137 -----GGWDTSRIDQ-AHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD--------NTVKVWKLY-NGIWKMDC 201 (288)
Q Consensus 137 -----~~~~~~~~~~-~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d--------~~i~iwd~~-~~~~~~~~ 201 (288)
+.. .... .+...+..+.|+|++ +.|+..+.+ ..|.+||+. ++... +.
T Consensus 172 ~~~~~~~~---~~l~~~~~~~~~~~~~SpDG--------------~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~-~~ 233 (662)
T 3azo_A 172 AAADRSAV---RELSDDAHRFVTGPRLSPDG--------------RQAVWLAWDHPRMPWEGTELKTARVTEDGRFA-DT 233 (662)
T ss_dssp TTTCGGGS---EESSCSCSSEECCCEECTTS--------------SEEEEEEECTTCCTTTCEEEEEEEECTTSCEE-EE
T ss_pred ccccCCce---eEEEecCCCcccCceECCCC--------------CEEEEEECCCCCCCCCCcEEEEEEECCCCccc-cc
Confidence 111 2222 344567788999997 667766644 369999998 44110 11
Q ss_pred eeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccc-cC--------eEEEEeecCCCE
Q 036510 202 FPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFK-TP--------VYRVSWSLTGNI 272 (288)
Q Consensus 202 ~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~-~~--------i~~~~~spdg~~ 272 (288)
.....+|...+..+.|+|++ +++++++.|+..+||.+...... ...+..+. .. +..++|+|+|++
T Consensus 234 ~~l~~~~~~~~~~~~~spdg----~l~~~~~~~~~~~l~~~~~~~~~--~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~ 307 (662)
T 3azo_A 234 RTLLGGPEEAIAQAEWAPDG----SLIVATDRTGWWNLHRVDPATGA--ATQLCRREEEFAGPLWTPGMRWFAPLANGLI 307 (662)
T ss_dssp EEEEEETTBCEEEEEECTTS----CEEEEECTTSSCEEEEECTTTCC--EEESSCCSSBSSCCCCSTTCCSEEECTTSCE
T ss_pred EEeCCCCCceEcceEECCCC----eEEEEECCCCCeEEEEEECCCCc--eeecccccccccCccccccCceEeEeCCCEE
Confidence 12224456789999999985 57778888885555555432111 11121111 11 567899999999
Q ss_pred EEEEeCCCcEEEeE
Q 036510 273 LAVADGNNNVTLWE 286 (288)
Q Consensus 273 l~s~~~d~~v~~w~ 286 (288)
+++++. ++++||.
T Consensus 308 ~~~~~~-~~~~l~~ 320 (662)
T 3azo_A 308 AVVHGK-GAAVLGI 320 (662)
T ss_dssp EEEEBS-SSCEEEE
T ss_pred EEEEEc-CccEEEE
Confidence 999998 9999994
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.66 E-value=1.8e-14 Score=134.65 Aligned_cols=238 Identities=12% Similarity=0.023 Sum_probs=145.0
Q ss_pred EEEEc--CCCCE-EEEeeC-CCcEEEEEeCCCCceeeEEEec-----cccCeEEEEecCCCCCCEEEEeeCC--------
Q 036510 16 DVAMD--YYGKR-LATASS-DYSIKIIGVGNNTSQHLAKLSG-----HKGAVWEVAWAHPKFGSILASCSFD-------- 78 (288)
Q Consensus 16 ~~~~s--~~g~~-l~s~~~-d~~i~lwd~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~~l~s~s~d-------- 78 (288)
...|+ |||++ |+.++. +..|.+++...........+.. |...+..++|+++ |+.|++++.|
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spD--g~~l~~~~~~~~~~~~~~ 158 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPE--RGEVWCMAEEFTGEGPSD 158 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETT--TTEEEEEEEEECSSSTTC
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCC--CCEEEEEEecccCCCCCC
Confidence 44454 99988 665543 4445555543001012344555 6778899999975 8899988887
Q ss_pred --CcEEEeecCCC-----CceEEeEEee-cCCCceeEEEeccCCCCeEEEEEeCC--------CcEEEEeecCCCCe-ee
Q 036510 79 --GTVIIWKEGNS-----NEWIKDHVFE-DHKSSVNSIDWAPHELGLCLACGSSD--------GNISVFTARADGGW-DT 141 (288)
Q Consensus 79 --~~v~iwd~~~~-----~~~~~~~~~~-~h~~~v~~l~~~p~~~~~~l~sg~~d--------~~i~i~d~~~~~~~-~~ 141 (288)
.+|.+|++... .. ...+. .+...+..++|+|| ++.++..+.+ ..|++||+...+.. ..
T Consensus 159 ~~~~i~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~SpD--G~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~ 233 (662)
T 3azo_A 159 VRRFLAAVPLDGSAAADRSA---VRELSDDAHRFVTGPRLSPD--GRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADT 233 (662)
T ss_dssp EEEEEEEEETTSTTTTCGGG---SEESSCSCSSEECCCEECTT--SSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEE
T ss_pred ceeEEEEEECCCCccccCCc---eeEEEecCCCcccCceECCC--CCEEEEEECCCCCCCCCCcEEEEEEECCCCccccc
Confidence 68999998751 22 12344 45567888999998 5666666544 37999999732211 22
Q ss_pred EEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEe--CCceeeeeeeccccCCcc--------
Q 036510 142 SRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLY--NGIWKMDCFPALQMHTDW-------- 211 (288)
Q Consensus 142 ~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~~~~~~h~~~-------- 211 (288)
......|...+..+.|+|++ ++++++..++..+||.+. ++.. + ....++...
T Consensus 234 ~~l~~~~~~~~~~~~~spdg--------------~l~~~~~~~~~~~l~~~~~~~~~~--~--~l~~~~~~~~~p~w~~~ 295 (662)
T 3azo_A 234 RTLLGGPEEAIAQAEWAPDG--------------SLIVATDRTGWWNLHRVDPATGAA--T--QLCRREEEFAGPLWTPG 295 (662)
T ss_dssp EEEEEETTBCEEEEEECTTS--------------CEEEEECTTSSCEEEEECTTTCCE--E--ESSCCSSBSSCCCCSTT
T ss_pred EEeCCCCCceEcceEECCCC--------------eEEEEECCCCCeEEEEEECCCCce--e--ecccccccccCcccccc
Confidence 23334556779999999997 567777788855555543 3321 1 111222221
Q ss_pred eEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCC--EEEEEeCCCcEEEeE
Q 036510 212 VRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGN--ILAVADGNNNVTLWE 286 (288)
Q Consensus 212 V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~--~l~s~~~d~~v~~w~ 286 (288)
+.++.|+|+. .++++++. +.+++|.+...... ...+..+...+..+ ++++++ .+++++.+....||.
T Consensus 296 ~~~~~~~~~~----~~~~~~~~-~~~~l~~~d~~~~~--~~~l~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 296 MRWFAPLANG----LIAVVHGK-GAAVLGILDPESGE--LVDAAGPWTEWAAT-LTVSGTRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp CCSEEECTTS----CEEEEEBS-SSCEEEEEETTTTE--EEECCSSCCEEEEE-EEEETTEEEEEEEETTEEEEEEE
T ss_pred CceEeEeCCC----EEEEEEEc-CccEEEEEECCCCc--EEEecCCCCeEEEE-EecCCCEEEEEEcCCCCCCEEEE
Confidence 4578888863 67888888 99999976543221 23344444556655 145554 445556665555554
No 168
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.65 E-value=1.3e-14 Score=123.49 Aligned_cols=205 Identities=13% Similarity=0.114 Sum_probs=128.3
Q ss_pred ceEEEEEcCCCCEE-EEeeCCCcEEEEEeCCCCceeeEEEec-c----ccCeEEEEecCCCCCCEEEEee----------
Q 036510 13 TVHDVAMDYYGKRL-ATASSDYSIKIIGVGNNTSQHLAKLSG-H----KGAVWEVAWAHPKFGSILASCS---------- 76 (288)
Q Consensus 13 ~v~~~~~s~~g~~l-~s~~~d~~i~lwd~~~~~~~~~~~~~~-h----~~~v~~~~~~~~~~~~~l~s~s---------- 76 (288)
.+..++|+|+|+++ ++++.++.|.+||+... +.+..+.. + ...+..++|+++ +++++.++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~~~~~ 110 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTG--ETLGRIDLSTPEERVKSLFGAALSPD--GKTLAIYESPVRLELTHF 110 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTC--CEEEEEECCBTTEEEECTTCEEECTT--SSEEEEEEEEEEECSSCE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCC--CeEeeEEcCCcccccccccceEECCC--CCEEEEEecccccccccc
Confidence 47789999999765 55666889999998543 44444432 2 235678899864 77887775
Q ss_pred --CCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccC-CCCee
Q 036510 77 --FDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAH-PVGVT 153 (288)
Q Consensus 77 --~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~v~ 153 (288)
.++.|.+||+.++. ....+.. ...+.++.|+|+ +..++++ ++.|.+||+..+.... .....+ ...
T Consensus 111 ~~~~~~i~v~d~~~~~---~~~~~~~-~~~~~~~~~s~d--g~~l~~~--~~~i~~~d~~~~~~~~--~~~~~~~~~~-- 178 (337)
T 1pby_B 111 EVQPTRVALYDAETLS---RRKAFEA-PRQITMLAWARD--GSKLYGL--GRDLHVMDPEAGTLVE--DKPIQSWEAE-- 178 (337)
T ss_dssp EECCCEEEEEETTTTE---EEEEEEC-CSSCCCEEECTT--SSCEEEE--SSSEEEEETTTTEEEE--EECSTTTTTT--
T ss_pred cccCceEEEEECCCCc---EEEEEeC-CCCcceeEECCC--CCEEEEe--CCeEEEEECCCCcEee--eeeccccCCC--
Confidence 67999999987543 2233433 346788999998 4445555 6889999987542211 111111 011
Q ss_pred EEEeCCCCCCC-----------------------------------------------------ceecccccCCCceeEE
Q 036510 154 SVSWAPSTAPG-----------------------------------------------------ALVGSGFLDPVQKLCS 180 (288)
Q Consensus 154 ~i~~~p~~~~~-----------------------------------------------------~~~~~~~~~~~~~l~s 180 (288)
+.|+|++... ......+..+++++++
T Consensus 179 -~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 257 (337)
T 1pby_B 179 -TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFG 257 (337)
T ss_dssp -TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred -ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEE
Confidence 1223322100 0001223344566776
Q ss_pred eecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecC
Q 036510 181 GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245 (288)
Q Consensus 181 ~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~ 245 (288)
+ ++.|.+||+.++. .+..+.. ...+.++.|+|++ ++|++++.|+.|++||+...
T Consensus 258 ~--~~~v~~~d~~~~~----~~~~~~~-~~~~~~~~~s~dg----~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 258 A--YNVLESFDLEKNA----SIKRVPL-PHSYYSVNVSTDG----STVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp E--ESEEEEEETTTTE----EEEEEEC-SSCCCEEEECTTS----CEEEEESBSSEEEEEETTTC
T ss_pred e--CCeEEEEECCCCc----CcceecC-CCceeeEEECCCC----CEEEEEcCCCcEEEEECcCC
Confidence 6 7899999987753 2223322 2347899999984 57888888999999998653
No 169
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.64 E-value=2.2e-13 Score=114.71 Aligned_cols=236 Identities=14% Similarity=0.034 Sum_probs=152.6
Q ss_pred ccccceEEEEEcCCCC-EEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecC
Q 036510 9 GHEDTVHDVAMDYYGK-RLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEG 87 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~-~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~ 87 (288)
.+.....++.|+|+|+ +++++..++.|..|+.... ...+..+...+.+++++++ +.++++...++.|.+||..
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l~~~~d--g~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ----LSPEMHPSHHQNGHCLNKQ--GHLIACSHGLRRLERQREP 98 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC----EEEEESSCSSEEEEEECTT--CCEEEEETTTTEEEEECST
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC----eEEEECCCCCcceeeECCC--CcEEEEecCCCeEEEEcCC
Confidence 3455667899999998 7788888999999997542 4556667788999999764 7888887778999999986
Q ss_pred CCCceEEeEEeec-CCCceeEEEeccCCCCeEEEE----EeC-------------CCcEEEEeecCCCCeeeEEeeccCC
Q 036510 88 NSNEWIKDHVFED-HKSSVNSIDWAPHELGLCLAC----GSS-------------DGNISVFTARADGGWDTSRIDQAHP 149 (288)
Q Consensus 88 ~~~~~~~~~~~~~-h~~~v~~l~~~p~~~~~~l~s----g~~-------------d~~i~i~d~~~~~~~~~~~~~~~~~ 149 (288)
++........... ....++.++++|+ +.++++ |.. .+.| |.+...+.. .....+.
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~--G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l--~~~~~~g~~---~~~~~~~ 171 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPD--GSLWFSDPTYGIDKPEEGYGGEMELPGRWV--FRLAPDGTL---SAPIRDR 171 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTT--SCEEEEECSHHHHCGGGSSCCCCCSSSCEE--EEECTTSCE---EEEECCC
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCC--CCEEEECCccccccccccccccccCCCcEE--EEECCCCCE---EEeecCC
Confidence 6542111111111 1234677899987 566665 321 2344 444332322 2222344
Q ss_pred CCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEe-CCce-eeeeeeccccCCcceEEEEecCCCCCCCcE
Q 036510 150 VGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLY-NGIW-KMDCFPALQMHTDWVRDVAWAPNLGLPKST 227 (288)
Q Consensus 150 ~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~ 227 (288)
.....+.|+|++ +.+++.+.++.|.+||+. ++.. ... ..+..+...+..+.+.+++ ++
T Consensus 172 ~~~~gi~~s~dg--------------~~lv~~~~~~~i~~~~~~~~g~~~~~~--~~~~~~~~~p~~i~~d~~G----~l 231 (296)
T 3e5z_A 172 VKPNGLAFLPSG--------------NLLVSDTGDNATHRYCLNARGETEYQG--VHFTVEPGKTDGLRVDAGG----LI 231 (296)
T ss_dssp SSEEEEEECTTS--------------CEEEEETTTTEEEEEEECSSSCEEEEE--EEECCSSSCCCSEEEBTTS----CE
T ss_pred CCCccEEECCCC--------------CEEEEeCCCCeEEEEEECCCCcCcCCC--eEeeCCCCCCCeEEECCCC----CE
Confidence 556789999987 556788888999999996 3321 101 1112344456788999874 45
Q ss_pred EEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEe-ecCCCEEEEEeCCCcEEE
Q 036510 228 IASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSW-SLTGNILAVADGNNNVTL 284 (288)
Q Consensus 228 l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~-spdg~~l~s~~~d~~v~~ 284 (288)
.++. ++.|.+|+.+. . ....+..... +.+++| +||++.|++++.++..++
T Consensus 232 ~v~~--~~~v~~~~~~g--~--~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 232 WASA--GDGVHVLTPDG--D--ELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSI 282 (296)
T ss_dssp EEEE--TTEEEEECTTS--C--EEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEE
T ss_pred EEEc--CCeEEEECCCC--C--EEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEE
Confidence 5555 78999998752 1 1223333344 889999 599999999988754443
No 170
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.64 E-value=1.4e-13 Score=129.91 Aligned_cols=251 Identities=11% Similarity=-0.008 Sum_probs=152.1
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCCC-----cEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCc
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSDY-----SIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGT 80 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d~-----~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~ 80 (288)
+..+|+..+..++|||||++||.++.++ .|++||+..+ +.+.....+ ..+..++|+++ |+.|+.++.++.
T Consensus 119 l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg--~~~~~~~~~-~~~~~~~wspD--g~~l~~~~~~~~ 193 (710)
T 2xdw_A 119 LSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA--KELPDVLER-VKFSCMAWTHD--GKGMFYNAYPQQ 193 (710)
T ss_dssp GCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT--EEEEEEEEE-ECSCCEEECTT--SSEEEEEECCCC
T ss_pred hccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCC--CCCcccccC-cccceEEEEeC--CCEEEEEEECCc
Confidence 3445666788899999999988765543 8999998654 333322222 23567999875 889998888776
Q ss_pred ----------------EEEeecCCCCce-EEeEEeecCCCceeEEEeccCCCCeEEEEEeC-----CCcEEEEeecC---
Q 036510 81 ----------------VIIWKEGNSNEW-IKDHVFEDHKSSVNSIDWAPHELGLCLACGSS-----DGNISVFTARA--- 135 (288)
Q Consensus 81 ----------------v~iwd~~~~~~~-~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~-----d~~i~i~d~~~--- 135 (288)
|++|++.++... ........|...+..+.|+|+ ++.++..+. +..|++||+..
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~~~l~~~d~~~~~~ 271 (710)
T 2xdw_A 194 DGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDD--GRYVLLSIREGCDPVNRLWYCDLQQESN 271 (710)
T ss_dssp SSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTT--SCEEEEEEECSSSSCCEEEEEEGGGSSS
T ss_pred cccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCC--CCEEEEEEEccCCCccEEEEEECccccc
Confidence 999998765321 121122224555789999998 455554443 56899999875
Q ss_pred ---CC-CeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecC---CcEEEEEEeCCceeeeeeeccccC
Q 036510 136 ---DG-GWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD---NTVKVWKLYNGIWKMDCFPALQMH 208 (288)
Q Consensus 136 ---~~-~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~h 208 (288)
+. .+ .....+...+.. .|+|++. .+++.+..+ ..|.+||+.++.. .....+..|
T Consensus 272 ~~~~~~~~---~~l~~~~~~~~~-~~s~dg~-------------~l~~~s~~~~~~~~l~~~d~~~~~~--~~~~~l~~~ 332 (710)
T 2xdw_A 272 GITGILKW---VKLIDNFEGEYD-YVTNEGT-------------VFTFKTNRHSPNYRLINIDFTDPEE--SKWKVLVPE 332 (710)
T ss_dssp SSCSSCCC---EEEECSSSSCEE-EEEEETT-------------EEEEEECTTCTTCEEEEEETTSCCG--GGCEEEECC
T ss_pred ccCCccce---EEeeCCCCcEEE-EEeccCC-------------EEEEEECCCCCCCEEEEEeCCCCCc--ccceeccCC
Confidence 32 12 222233333433 4677652 233333322 3588888765421 011233334
Q ss_pred Cc--ceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEE-e---CCCcE
Q 036510 209 TD--WVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVA-D---GNNNV 282 (288)
Q Consensus 209 ~~--~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~-~---~d~~v 282 (288)
.. .+..+.|+++ +.++++...|+..+||-....... ....+..+...+..++++|+++.++.. + ..++|
T Consensus 333 ~~~~~~~~~~~~~~----~~lv~~~~~~g~~~l~~~~~~~g~-~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i 407 (710)
T 2xdw_A 333 HEKDVLEWVACVRS----NFLVLCYLHDVKNTLQLHDLATGA-LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGII 407 (710)
T ss_dssp CSSCEEEEEEEETT----TEEEEEEEETTEEEEEEEETTTCC-EEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEE
T ss_pred CCCCeEEEEEEEcC----CEEEEEEEECCEEEEEEEECCCCC-EEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEE
Confidence 33 6888999864 367888888986655544421111 112233335568889999999876644 2 24688
Q ss_pred EEeEc
Q 036510 283 TLWEE 287 (288)
Q Consensus 283 ~~w~~ 287 (288)
.+||+
T Consensus 408 ~~~d~ 412 (710)
T 2xdw_A 408 YHCDL 412 (710)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 88885
No 171
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.61 E-value=1.1e-12 Score=112.65 Aligned_cols=221 Identities=13% Similarity=0.148 Sum_probs=137.6
Q ss_pred ceEEEEEcCCCCEEEEeeCC---Cc--EEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCC---------
Q 036510 13 TVHDVAMDYYGKRLATASSD---YS--IKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFD--------- 78 (288)
Q Consensus 13 ~v~~~~~s~~g~~l~s~~~d---~~--i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d--------- 78 (288)
.+..++|+|||++|+.++.+ +. |.+|++.. ++... +..+.. +..++|+++ |+.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~--g~~~~-l~~~~~-~~~~~wspd--g~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLET--LSSKK-ILEAKN-IRSLEWNED--SRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTT--TEEEE-EEEESE-EEEEEECTT--SSEEEEEEECCCC------
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCC--CceEE-EEcCCC-ccceeECCC--CCEEEEEEccCCCcCCcEE
Confidence 46678999999999887754 34 55556543 23332 333334 899999875 7888877643
Q ss_pred ------------------CcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCC-------cEEEEee
Q 036510 79 ------------------GTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG-------NISVFTA 133 (288)
Q Consensus 79 ------------------~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~-------~i~i~d~ 133 (288)
..|.+|++.++.. ...+.. . .+..+.|+|+ + +++++..++ ...+|.+
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~---~~~l~~-~-~~~~~~~spd--g-~~~~~~~~~~~~~~~~~~~l~~~ 205 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEV---IEEFEK-P-RFSSGIWHRD--K-IVVNVPHREIIPQYFKFWDIYIW 205 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEE---EEEEEE-E-TTCEEEEETT--E-EEEEEECCCSSCCSSCCEEEEEE
T ss_pred EcccceeecCcccccCccceEEEEECCCCeE---EeeecC-C-CcccccCCCC--e-EEEEEecccccccccccccEEEe
Confidence 5688888865432 122333 3 7889999998 4 566665442 4455555
Q ss_pred cCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecC--------CcEEEEEEeCCceeeeeeecc
Q 036510 134 RADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD--------NTVKVWKLYNGIWKMDCFPAL 205 (288)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d--------~~i~iwd~~~~~~~~~~~~~~ 205 (288)
. .+... ... .+ ..+..+ +|++ +.|+..+.+ ..|.+|| ++. .....
T Consensus 206 d-~~~~~--~l~-~~-~~~~~~--spdg--------------~~l~~~~~~~~~~~~~~~~l~~~d--~~~----~~~l~ 258 (347)
T 2gop_A 206 E-DGKEE--KMF-EK-VSFYAV--DSDG--------------ERILLYGKPEKKYMSEHNKLYIYD--GKE----VMGIL 258 (347)
T ss_dssp E-TTEEE--EEE-EE-ESEEEE--EECS--------------SCEEEEECCSSSCCCSSCEEEEEC--SSC----EEESS
T ss_pred C-CCceE--Eec-cC-cceeeE--CCCC--------------CEEEEEEccccCCccccceEEEEC--CCc----eEecc
Confidence 4 32221 111 12 334443 7776 455554433 3577777 432 22233
Q ss_pred ccCCcceEE-EEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcE-E
Q 036510 206 QMHTDWVRD-VAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNV-T 283 (288)
Q Consensus 206 ~~h~~~V~~-v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v-~ 283 (288)
.+|...+.. +.|+ + + ++++++.|+.+++| +. .+.. ..+......|.+++|+| .++++++.+++. +
T Consensus 259 ~~~~~~~~~~~~~s-d----g-~~~~~~~~~~~~l~-~~-~g~~---~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~ 325 (347)
T 2gop_A 259 DEVDRGVGQAKIKD-G----K-VYFTLFEEGSVNLY-IW-DGEI---KPIAKGRHWIMGFDVDE--IVVYLKETATRLRE 325 (347)
T ss_dssp TTCCSEEEEEEEET-T----E-EEEEEEETTEEEEE-EE-SSSE---EEEECSSSEEEEEEESS--SEEEEEECSSSCCE
T ss_pred ccCCcccCCccEEc-C----c-EEEEEecCCcEEEE-Ec-CCce---EEEecCCCeEEeeeeeC--cEEEEEcCCCChHH
Confidence 456677886 8998 6 3 78899999999999 87 3221 23333456789999999 677777777665 7
Q ss_pred EeEc
Q 036510 284 LWEE 287 (288)
Q Consensus 284 ~w~~ 287 (288)
||..
T Consensus 326 l~~~ 329 (347)
T 2gop_A 326 LFTW 329 (347)
T ss_dssp EEEE
T ss_pred heEe
Confidence 7753
No 172
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.60 E-value=6.8e-14 Score=119.77 Aligned_cols=209 Identities=7% Similarity=-0.040 Sum_probs=126.5
Q ss_pred ceEEEEEcCCCCEE-EEeeCCCcEEEEEeCCCCceeeEEEec-c-----ccCeEEEEecCCCCCCEEEEeeCC-------
Q 036510 13 TVHDVAMDYYGKRL-ATASSDYSIKIIGVGNNTSQHLAKLSG-H-----KGAVWEVAWAHPKFGSILASCSFD------- 78 (288)
Q Consensus 13 ~v~~~~~s~~g~~l-~s~~~d~~i~lwd~~~~~~~~~~~~~~-h-----~~~v~~~~~~~~~~~~~l~s~s~d------- 78 (288)
.+..++|+|+|+++ +++..++.|.+||.... +.+..+.. + ...+..++|+++ |++|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~--~~~~~~~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~~~~~ 119 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC--KNTFHANLSSVPGEVGRSMYSFAISPD--GKEVYATVNPTQRLNDH 119 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTT--EEEEEEESCCSTTEEEECSSCEEECTT--SSEEEEEEEEEEECSSC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCC--cEEEEEEcccccccccccccceEECCC--CCEEEEEcccccccccc
Confidence 56788999999865 55667899999998543 44555542 2 233678899865 8888888865
Q ss_pred -----CcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccC---C-
Q 036510 79 -----GTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAH---P- 149 (288)
Q Consensus 79 -----~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~---~- 149 (288)
+.|.+||+.++........+. +...+.+++|+|++ .+++ ++ +.|.+||..++..... ..... +
T Consensus 120 ~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg--~l~~-~~--~~i~~~d~~~~~~~~~--~~~~~~~~~~ 191 (349)
T 1jmx_B 120 YVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDG--SLYV-AG--PDIYKMDVKTGKYTVA--LPLRNWNRKG 191 (349)
T ss_dssp EEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTS--CEEE-ES--SSEEEECTTTCCEEEE--ECSTTCCCTT
T ss_pred cccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCC--cEEE-cc--CcEEEEeCCCCceecc--ccccccCCcc
Confidence 999999987643221222333 33468899999985 4343 43 3499999876532211 11110 0
Q ss_pred ---------------C----CeeEEEeCCCCCCC------------------------------ceecccccC-CCceeE
Q 036510 150 ---------------V----GVTSVSWAPSTAPG------------------------------ALVGSGFLD-PVQKLC 179 (288)
Q Consensus 150 ---------------~----~v~~i~~~p~~~~~------------------------------~~~~~~~~~-~~~~l~ 179 (288)
. ....+.+++++... ......+.. ++++++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~ 271 (349)
T 1jmx_B 192 YSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIY 271 (349)
T ss_dssp BCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEE
T ss_pred ccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEE
Confidence 0 11223333322100 001112223 456777
Q ss_pred EeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeec
Q 036510 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAR 244 (288)
Q Consensus 180 s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~ 244 (288)
++ ++.|.+||+.++. .+..+.. ...+.+++|+|++ ++|++++.++.|++||+..
T Consensus 272 ~~--~~~v~~~d~~~~~----~~~~~~~-~~~~~~~~~s~dg----~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 272 GV--LNRLAKYDLKQRK----LIKAANL-DHTYYCVAFDKKG----DKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp EE--ESEEEEEETTTTE----EEEEEEC-SSCCCEEEECSSS----SCEEEESBSSEEEEEETTT
T ss_pred EE--cCeEEEEECccCe----EEEEEcC-CCCccceEECCCC----CEEEEecCCCeEEEEeccc
Confidence 66 7899999987763 2222222 2346789999984 5677788899999999864
No 173
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.60 E-value=2.3e-13 Score=129.08 Aligned_cols=239 Identities=14% Similarity=0.200 Sum_probs=142.2
Q ss_pred EEEEEcCCCCEEEEeeCC---------CcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 15 HDVAMDYYGKRLATASSD---------YSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 15 ~~~~~s~~g~~l~s~~~d---------~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
..++|||||++|+.++.+ +.+.+||+..+ + +..+..|...+...+|||+ |+.|+.++ |+.|.+|+
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~--~-~~~l~~~~~~~~~~~~SPd--G~~la~~~-~~~i~~~~ 138 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR--Q-LITEERIPNNTQWVTWSPV--GHKLAYVW-NNDIYVKI 138 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT--E-ECCSSCCCTTEEEEEECSS--TTCEEEEE-TTEEEEES
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCC--c-EEEcccCCCcceeeEECCC--CCEEEEEE-CCeEEEEE
Confidence 347889999999999887 45569998643 2 3456778888999999975 88999885 68999999
Q ss_pred cCCCCceEEeEEeecCCCc-----------------eeEEEeccCCCCeEEEEEeCCC----------------------
Q 036510 86 EGNSNEWIKDHVFEDHKSS-----------------VNSIDWAPHELGLCLACGSSDG---------------------- 126 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~-----------------v~~l~~~p~~~~~~l~sg~~d~---------------------- 126 (288)
...+... ..+..++... ..++.|+|| +..||.++.|.
T Consensus 139 ~~~~~~~--~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpD--g~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~ 214 (740)
T 4a5s_A 139 EPNLPSY--RITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPN--GTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTV 214 (740)
T ss_dssp STTSCCE--ECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTT--SSEEEEEEEECTTCCEEEEEECCSTTCSSCEEE
T ss_pred CCCCceE--EEcCCCCccceecCcccccccchhcCCCcceEECCC--CCEEEEEEEcccCCceEEEEeecCCCCCCCcce
Confidence 8765421 1122222222 235899998 56666664332
Q ss_pred --------------cEEEEeecC---CCCeeeEEeec-----cCCCCeeEEEeCCCCCCCceecccccCCCceeEEe---
Q 036510 127 --------------NISVFTARA---DGGWDTSRIDQ-----AHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSG--- 181 (288)
Q Consensus 127 --------------~i~i~d~~~---~~~~~~~~~~~-----~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~--- 181 (288)
.|++||+.. +.......... +|...+.++.|+|++ +.++..
T Consensus 215 ~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg--------------~~~~~~~~r 280 (740)
T 4a5s_A 215 RVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQE--------------RISLQWLRR 280 (740)
T ss_dssp EEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETT--------------EEEEEEEES
T ss_pred eecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCC--------------eEEEEEeCC
Confidence 366666655 32111111111 255668889999987 433332
Q ss_pred -ecCCcEEEEEEeCCceeeeee--ecc--ccCCcceE-----EEEecCCCCCCCcEEE-EEeC-CC--cEEEEEeecCCC
Q 036510 182 -GCDNTVKVWKLYNGIWKMDCF--PAL--QMHTDWVR-----DVAWAPNLGLPKSTIA-SASE-DG--KVIIWTVAREGD 247 (288)
Q Consensus 182 -~~d~~i~iwd~~~~~~~~~~~--~~~--~~h~~~V~-----~v~~sp~~~~~~~~l~-s~s~-D~--~i~iw~~~~~~~ 247 (288)
+.+..|.+||+.++...-.+. ..+ .+|..+|. ++.|+||+ +.|+ ..+. ++ .|.+|++....
T Consensus 281 ~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG----~~l~~~~s~~~G~~~l~~~~~~~~~- 355 (740)
T 4a5s_A 281 IQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDG----NSFYKIISNEEGYRHICYFQIDKKD- 355 (740)
T ss_dssp STTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTS----SEEEEEEECTTSCEEEEEEETTCSS-
T ss_pred CCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCC----CEEEEEEEcCCCceEEEEEECCCCc-
Confidence 223469999998874100011 122 45666665 78999985 5565 6654 44 56667654321
Q ss_pred cccceEeeccccCeEEEEeecCCCEEEEEeCC-----CcEEEeE
Q 036510 248 QWEGKVLHDFKTPVYRVSWSLTGNILAVADGN-----NNVTLWE 286 (288)
Q Consensus 248 ~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d-----~~v~~w~ 286 (288)
...+....-.+..+. .+||+.|+..+.. +..+||.
T Consensus 356 ---~~~lT~g~~~v~~~~-~~d~~~i~f~~~~~~~~~~~~~ly~ 395 (740)
T 4a5s_A 356 ---CTFITKGTWEVIGIE-ALTSDYLYYISNEYKGMPGGRNLYK 395 (740)
T ss_dssp ---CEESCCSSSCEEEEE-EECSSEEEEEESCGGGCTTCBEEEE
T ss_pred ---eEecccCCEEEEEEE-EEeCCEEEEEEecCCCCCceeEEEE
Confidence 123333233454443 2557665544432 4456664
No 174
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.59 E-value=1.1e-13 Score=130.34 Aligned_cols=245 Identities=7% Similarity=-0.078 Sum_probs=150.3
Q ss_pred ccccccceEEEEEcCCCCEEE-----EeeCCCcEEEEEeCCCCceeeEEEeccccCe--EEEEecCCCCCCEEEEeeCCC
Q 036510 7 ETGHEDTVHDVAMDYYGKRLA-----TASSDYSIKIIGVGNNTSQHLAKLSGHKGAV--WEVAWAHPKFGSILASCSFDG 79 (288)
Q Consensus 7 ~~~h~~~v~~~~~s~~g~~l~-----s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v--~~~~~~~~~~~~~l~s~s~d~ 79 (288)
..+|+..+.+++|||||++|| +|+.+.+|++||+..+. .+. ..+...+ ..++|+++ |+.|+.++.|.
T Consensus 116 a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~--~~~--~~~~~~~~~~~~~wspD--g~~l~~~~~d~ 189 (695)
T 2bkl_A 116 SKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGE--WSK--VDVIEGGKYATPKWTPD--SKGFYYEWLPT 189 (695)
T ss_dssp SSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCC--BCS--SCCBSCCTTCCCEECTT--SSEEEEEECCC
T ss_pred ccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCC--CcC--CcccCcccccceEEecC--CCEEEEEEecC
Confidence 346777888999999999988 56667899999996543 220 1122222 57899875 88999999887
Q ss_pred c-------------EEEeecCCCCce-EEeEEeecCCCceeEEEeccCCCCeEEEEEeCCC----cEEEEeecCCCCeee
Q 036510 80 T-------------VIIWKEGNSNEW-IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG----NISVFTARADGGWDT 141 (288)
Q Consensus 80 ~-------------v~iwd~~~~~~~-~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~----~i~i~d~~~~~~~~~ 141 (288)
. |++|++.++..- .++.....|...+.++.|+|++ .+++..+.++ .|++++...+ .+.
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG--~~l~~~~~~~~~~~~l~~~~~~~~-~~~- 265 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDG--KYLFVYILRGWSENDVYWKRPGEK-DFR- 265 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTS--CCEEEEEEETTTEEEEEEECTTCS-SCE-
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCC--CEEEEEEeCCCCceEEEEEcCCCC-ceE-
Confidence 6 999998765421 1222223455678899999984 5555554444 5555543222 222
Q ss_pred EEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEee---cCCcEEEEEEeCCceeeeeeeccccC--CcceEEEE
Q 036510 142 SRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGG---CDNTVKVWKLYNGIWKMDCFPALQMH--TDWVRDVA 216 (288)
Q Consensus 142 ~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~---~d~~i~iwd~~~~~~~~~~~~~~~~h--~~~V~~v~ 216 (288)
....+...+....| |++ .+++++. .+..|.+||+.++... ....+..| ...|..+.
T Consensus 266 --~l~~~~~~~~~~~~-~~g--------------~l~~~s~~~~~~~~l~~~d~~~~~~~--~~~~l~~~~~~~~l~~~~ 326 (695)
T 2bkl_A 266 --LLVKGVGAKYEVHA-WKD--------------RFYVLTDEGAPRQRVFEVDPAKPARA--SWKEIVPEDSSASLLSVS 326 (695)
T ss_dssp --EEEECSSCCEEEEE-ETT--------------EEEEEECTTCTTCEEEEEBTTBCSGG--GCEEEECCCSSCEEEEEE
T ss_pred --EeecCCCceEEEEe-cCC--------------cEEEEECCCCCCCEEEEEeCCCCCcc--CCeEEecCCCCCeEEEEE
Confidence 22233334455555 444 3333333 3567888987654210 01122222 44588888
Q ss_pred ecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeecc-ccCeEEEEeecCCCEEEEEe----CCCcEEEeEc
Q 036510 217 WAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDF-KTPVYRVSWSLTGNILAVAD----GNNNVTLWEE 287 (288)
Q Consensus 217 ~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~-~~~i~~~~~spdg~~l~s~~----~d~~v~~w~~ 287 (288)
|+. +.++++...|+..++|.+...... ...+..+ ...+..++++||++.++... .+++|.+||+
T Consensus 327 ~~~-----~~lv~~~~~dg~~~l~~~~~~g~~--~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~ 395 (695)
T 2bkl_A 327 IVG-----GHLSLEYLKDATSEVRVATLKGKP--VRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSV 395 (695)
T ss_dssp EET-----TEEEEEEEETTEEEEEEEETTCCE--EEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEET
T ss_pred EEC-----CEEEEEEEECCEEEEEEEeCCCCe--eEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 883 368889999999999987642211 1222222 34577889999998777332 3478999985
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.59 E-value=4.5e-12 Score=108.23 Aligned_cols=237 Identities=9% Similarity=0.031 Sum_probs=148.4
Q ss_pred ccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCC----CcEEEe
Q 036510 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFD----GTVIIW 84 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d----~~v~iw 84 (288)
++...+.+++|+++|++++++..++.|.+||..... .......+...+.+++++++ ++++++...+ +.|.+|
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~i~~~~d--g~l~v~~~~~~~~~~~i~~~ 117 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE--IKRPFVSHKANPAAIKIHKD--GRLFVCYLGDFKSTGGIFAA 117 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC--EEEEEECSSSSEEEEEECTT--SCEEEEECTTSSSCCEEEEE
T ss_pred ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc--EEEEeeCCCCCcceEEECCC--CcEEEEeCCCCCCCceEEEE
Confidence 455567889999999988888889999999875432 22223356678999999754 7788877766 789999
Q ss_pred ecCCCCceEEeEEee--cCCCceeEEEeccCCCCeEEEEEeC------CCcEEEEeecCCCCeeeEEeeccCCCCeeEEE
Q 036510 85 KEGNSNEWIKDHVFE--DHKSSVNSIDWAPHELGLCLACGSS------DGNISVFTARADGGWDTSRIDQAHPVGVTSVS 156 (288)
Q Consensus 85 d~~~~~~~~~~~~~~--~h~~~v~~l~~~p~~~~~~l~sg~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 156 (288)
|....... ..+. .+...++.+.++|+ +.++++... .+.|..++...+ ...... ........+.
T Consensus 118 d~~~~~~~---~~~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~~~~~~~~l~~~~~~~~-~~~~~~---~~~~~~~~i~ 188 (333)
T 2dg1_A 118 TENGDNLQ---DIIEDLSTAYCIDDMVFDSK--GGFYFTDFRGYSTNPLGGVYYVSPDFR-TVTPII---QNISVANGIA 188 (333)
T ss_dssp CTTSCSCE---EEECSSSSCCCEEEEEECTT--SCEEEEECCCBTTBCCEEEEEECTTSC-CEEEEE---EEESSEEEEE
T ss_pred eCCCCEEE---EEEccCccCCcccceEECCC--CCEEEEeccccccCCCceEEEEeCCCC-EEEEee---cCCCcccceE
Confidence 98654321 1121 23456899999997 555555432 234444443321 222111 1123467889
Q ss_pred eCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeC-Ccee--e--eeeeccccCCcceEEEEecCCCCCCCcEEEEE
Q 036510 157 WAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWK--M--DCFPALQMHTDWVRDVAWAPNLGLPKSTIASA 231 (288)
Q Consensus 157 ~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~--~--~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~ 231 (288)
|+|++. .++++.+.++.|.+||+.+ +... + .....+.++ ..+..+.+++++ .+.++.
T Consensus 189 ~~~dg~-------------~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G----~l~v~~ 250 (333)
T 2dg1_A 189 LSTDEK-------------VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDD----NLYVAM 250 (333)
T ss_dssp ECTTSS-------------EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTC----CEEEEE
T ss_pred ECCCCC-------------EEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCC----CEEEEE
Confidence 999862 2445556678999999964 2111 0 111112223 357889999974 567777
Q ss_pred eCCCcEEEEEeecCCCcccceEeecccc------CeEEEEeecCCCEEEEEeCCC
Q 036510 232 SEDGKVIIWTVAREGDQWEGKVLHDFKT------PVYRVSWSLTGNILAVADGNN 280 (288)
Q Consensus 232 s~D~~i~iw~~~~~~~~~~~~~~~~~~~------~i~~~~~spdg~~l~s~~~d~ 280 (288)
..++.|.+||.+. .. ...+..... .+.+++|+|||+.|++++.++
T Consensus 251 ~~~~~v~~~d~~g--~~--~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 251 YGQGRVLVFNKRG--YP--IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp ETTTEEEEECTTS--CE--EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred cCCCEEEEECCCC--CE--EEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 7789999998632 11 122222221 578999999998877776653
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.58 E-value=4e-13 Score=114.87 Aligned_cols=243 Identities=11% Similarity=0.119 Sum_probs=156.6
Q ss_pred cceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCc
Q 036510 12 DTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNE 91 (288)
Q Consensus 12 ~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~ 91 (288)
..|.++.|++++..+++.+.++.++.|. . .....+.++...+.+++|+++ +++++++..++.|.+||..++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~--g~l~~~~~~~~~i~~~d~~~~~~ 78 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTIT---A--EPWLEISKKGLQLEGLNFDRQ--GQLFLLDVFEGNIFKINPETKEI 78 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEE---C--EEEEEEESSCCCEEEEEECTT--SCEEEEETTTCEEEEECTTTCCE
T ss_pred cccceeeecCCccceeEEeecccCcccc---c--ceeEEEeccCccccCcEECCC--CCEEEEECCCCEEEEEeCCCCcE
Confidence 4467788999888888888889999982 1 345667777777899999854 78888888999999999865541
Q ss_pred eEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC----CcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCcee
Q 036510 92 WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD----GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV 167 (288)
Q Consensus 92 ~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~ 167 (288)
......+...+.++.++|+ +.++++...+ +.|.+||...... ........+...+..+.++|++
T Consensus 79 ---~~~~~~~~~~~~~i~~~~d--g~l~v~~~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~i~~d~~g------ 146 (333)
T 2dg1_A 79 ---KRPFVSHKANPAAIKIHKD--GRLFVCYLGDFKSTGGIFAATENGDNL-QDIIEDLSTAYCIDDMVFDSKG------ 146 (333)
T ss_dssp ---EEEEECSSSSEEEEEECTT--SCEEEEECTTSSSCCEEEEECTTSCSC-EEEECSSSSCCCEEEEEECTTS------
T ss_pred ---EEEeeCCCCCcceEEECCC--CcEEEEeCCCCCCCceEEEEeCCCCEE-EEEEccCccCCcccceEECCCC------
Confidence 1222245678999999988 5666666555 6899998765432 1111111234568889999876
Q ss_pred cccccCCCceeEEeec----CCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEee
Q 036510 168 GSGFLDPVQKLCSGGC----DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVA 243 (288)
Q Consensus 168 ~~~~~~~~~~l~s~~~----d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~ 243 (288)
+++++... +....||.+........ .+..+...+..+.|+|++ ..+.++.+.++.|.+|++.
T Consensus 147 --------~l~v~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~i~~~~dg---~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 147 --------GFYFTDFRGYSTNPLGGVYYVSPDFRTVT---PIIQNISVANGIALSTDE---KVLWVTETTANRLHRIALE 212 (333)
T ss_dssp --------CEEEEECCCBTTBCCEEEEEECTTSCCEE---EEEEEESSEEEEEECTTS---SEEEEEEGGGTEEEEEEEC
T ss_pred --------CEEEEeccccccCCCceEEEEeCCCCEEE---EeecCCCcccceEECCCC---CEEEEEeCCCCeEEEEEec
Confidence 44554432 12345555543211111 111222347889999984 1244566678899999986
Q ss_pred cCCCccc---ceEeeccc--cCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 244 REGDQWE---GKVLHDFK--TPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 244 ~~~~~~~---~~~~~~~~--~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
....... ........ ..+..++++++|+++++...++.|.+|+.
T Consensus 213 ~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 213 DDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp TTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred CCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 3211110 01111111 35778999999998888878899999973
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.56 E-value=3.4e-14 Score=123.91 Aligned_cols=231 Identities=10% Similarity=0.039 Sum_probs=136.8
Q ss_pred eEEEEEcCCCCEEEEeeCC---CcEEEEEeCCCCceeeEEEeccccCe-EEEEecCCCCCCEEEEeeCCCcEEEeecCCC
Q 036510 14 VHDVAMDYYGKRLATASSD---YSIKIIGVGNNTSQHLAKLSGHKGAV-WEVAWAHPKFGSILASCSFDGTVIIWKEGNS 89 (288)
Q Consensus 14 v~~~~~s~~g~~l~s~~~d---~~i~lwd~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~ 89 (288)
+..++|+|||++|+..... ..+.+|++..+ +. ..+..+.... ..+.|+++ |+.|+.++.++.+.+|++..+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~--~~-~~l~~~~~~~~~~~~~spd--g~~l~~~~~~~~l~~~d~~~~ 112 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQ--QA-VQLTEGKGDNTFGGFISTD--ERAFFYVKNELNLMKVDLETL 112 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTT--EE-EECCCSSCBCTTTCEECTT--SSEEEEEETTTEEEEEETTTC
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCC--cE-EEeecCCCCccccceECCC--CCEEEEEEcCCcEEEEECCCC
Confidence 6678899999998776543 35777776543 32 2333333332 23678865 899999999999999998765
Q ss_pred CceEEeEEeecCCCceeE-------------------EEeccCCCCeEEEEE-----eCCCcEEEEeecCCCCeeeEEee
Q 036510 90 NEWIKDHVFEDHKSSVNS-------------------IDWAPHELGLCLACG-----SSDGNISVFTARADGGWDTSRID 145 (288)
Q Consensus 90 ~~~~~~~~~~~h~~~v~~-------------------l~~~p~~~~~~l~sg-----~~d~~i~i~d~~~~~~~~~~~~~ 145 (288)
.. ......+...... +.|+|++ ..++.. ..+..|.+||+..+.. .. .
T Consensus 113 ~~---~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg--~~~~~~~~~~~~~~~~l~~~d~~~g~~-~~--~- 183 (396)
T 3c5m_A 113 EE---QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLT--SWEKFAEFYHTNPTCRLIKVDIETGEL-EV--I- 183 (396)
T ss_dssp CE---EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC--SHHHHHHHHHTCCCEEEEEEETTTCCE-EE--E-
T ss_pred Cc---EEEEecccccCCCCCEEEeccCCccccccccccccCCCC--cceeeeeeccCCCcceEEEEECCCCcE-Ee--e-
Confidence 42 1222223322222 2455653 222222 3456788898875432 11 1
Q ss_pred ccCCCCeeEEEeCC-CCCCCceecccccCCCceeEEeecC------CcEEEEEEeCCceeeeeeeccccC--CcceEEEE
Q 036510 146 QAHPVGVTSVSWAP-STAPGALVGSGFLDPVQKLCSGGCD------NTVKVWKLYNGIWKMDCFPALQMH--TDWVRDVA 216 (288)
Q Consensus 146 ~~~~~~v~~i~~~p-~~~~~~~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~h--~~~V~~v~ 216 (288)
..+...+..+.|+| ++ +.|+..+.+ ..|.+||+..+. ...+..+ ...+..+.
T Consensus 184 ~~~~~~~~~~~~sp~dg--------------~~l~~~~~~~~~~~~~~l~~~d~~~~~-----~~~l~~~~~~~~~~~~~ 244 (396)
T 3c5m_A 184 HQDTAWLGHPIYRPFDD--------------STVGFCHEGPHDLVDARMWLVNEDGSN-----VRKIKEHAEGESCTHEF 244 (396)
T ss_dssp EEESSCEEEEEEETTEE--------------EEEEEEECSCSSSCSCCCEEEETTSCC-----CEESSCCCTTEEEEEEE
T ss_pred ccCCcccccceECCCCC--------------CEEEEEecCCCCCCCceEEEEECCCCc-----eeEeeccCCCccccceE
Confidence 23456688999999 54 434433332 357777765432 1112222 23588899
Q ss_pred ecCCCCCCCcEEEEEeCC-----CcEEEEEeecCCCcccceEeeccccCeEEEEeec-CCCEEEEEe-------------
Q 036510 217 WAPNLGLPKSTIASASED-----GKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSL-TGNILAVAD------------- 277 (288)
Q Consensus 217 ~sp~~~~~~~~l~s~s~D-----~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~sp-dg~~l~s~~------------- 277 (288)
|+|++ ++|+.++.+ +.|++||+.... ...+..... .. +.|+| ||+++++++
T Consensus 245 ~spdg----~~l~~~~~~~~~~~~~l~~~d~~~g~----~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~ 314 (396)
T 3c5m_A 245 WIPDG----SAMAYVSYFKGQTDRVIYKANPETLE----NEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSY 314 (396)
T ss_dssp ECTTS----SCEEEEEEETTTCCEEEEEECTTTCC----EEEEEECCS-EE-EEEECSSSSEEEEEECCC----------
T ss_pred ECCCC----CEEEEEecCCCCccceEEEEECCCCC----eEEeeeCCC-CC-CCccCCCCceEEEecCCcceeecccccc
Confidence 99985 557666544 449999876432 122222222 23 89999 999988765
Q ss_pred ---CCCcEEEeEc
Q 036510 278 ---GNNNVTLWEE 287 (288)
Q Consensus 278 ---~d~~v~~w~~ 287 (288)
.+..|.+||.
T Consensus 315 ~~~~~~~i~~~d~ 327 (396)
T 3c5m_A 315 NIENDPFLYVLNT 327 (396)
T ss_dssp CCCCCCEEEEEET
T ss_pred ccCCCCcEEEEec
Confidence 3468999985
No 178
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.56 E-value=5.2e-14 Score=122.74 Aligned_cols=230 Identities=7% Similarity=0.004 Sum_probs=136.0
Q ss_pred EEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEE---E----------------EecCCCCCCEEEEe-
Q 036510 16 DVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE---V----------------AWAHPKFGSILASC- 75 (288)
Q Consensus 16 ~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~---~----------------~~~~~~~~~~l~s~- 75 (288)
.+.|+|||++|+.++.++.+++|++..+.. ...+..+...... + .|++ +++.++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp--dg~~~~~~~ 160 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEE--QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP--LTSWEKFAE 160 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCE--EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC--CCSHHHHHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCc--EEEEecccccCCCCCEEEeccCCccccccccccccCC--CCcceeeee
Confidence 367999999999999999999999865432 2223323321111 2 3343 24554433
Q ss_pred ----eCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC------CcEEEEeecCCCCeeeEEee
Q 036510 76 ----SFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD------GNISVFTARADGGWDTSRID 145 (288)
Q Consensus 76 ----s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d------~~i~i~d~~~~~~~~~~~~~ 145 (288)
..+..|.+||+.++.. ..+..+...+..+.|+|++ +..++..+.+ ..|.+|++.... .. ...
T Consensus 161 ~~~~~~~~~l~~~d~~~g~~----~~~~~~~~~~~~~~~sp~d-g~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~--~l~ 232 (396)
T 3c5m_A 161 FYHTNPTCRLIKVDIETGEL----EVIHQDTAWLGHPIYRPFD-DSTVGFCHEGPHDLVDARMWLVNEDGSN-VR--KIK 232 (396)
T ss_dssp HHHTCCCEEEEEEETTTCCE----EEEEEESSCEEEEEEETTE-EEEEEEEECSCSSSCSCCCEEEETTSCC-CE--ESS
T ss_pred eccCCCcceEEEEECCCCcE----EeeccCCcccccceECCCC-CCEEEEEecCCCCCCCceEEEEECCCCc-ee--Eee
Confidence 4567899999876542 1222455678999999932 4434444333 357777765332 11 111
Q ss_pred ccC-CCCeeEEEeCCCCCCCceecccccCCCceeEEeecC-----CcEEEEEEeCCceeeeeeeccccCCcceEEEEecC
Q 036510 146 QAH-PVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD-----NTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAP 219 (288)
Q Consensus 146 ~~~-~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp 219 (288)
... ...+..+.|+|++ +.|+..+.+ +.|.+||+.++.. +.+..+.+ .. +.|+|
T Consensus 233 ~~~~~~~~~~~~~spdg--------------~~l~~~~~~~~~~~~~l~~~d~~~g~~--~~l~~~~~----~~-~~~s~ 291 (396)
T 3c5m_A 233 EHAEGESCTHEFWIPDG--------------SAMAYVSYFKGQTDRVIYKANPETLEN--EEVMVMPP----CS-HLMSN 291 (396)
T ss_dssp CCCTTEEEEEEEECTTS--------------SCEEEEEEETTTCCEEEEEECTTTCCE--EEEEECCS----EE-EEEEC
T ss_pred ccCCCccccceEECCCC--------------CEEEEEecCCCCccceEEEEECCCCCe--EEeeeCCC----CC-CCccC
Confidence 211 2247788999987 445544333 3499999876532 12222221 23 88999
Q ss_pred -CCCCCCcEEEEEe----------------CCCcEEEEEeecCCCcccceEeecccc-----------CeEEEEeecCCC
Q 036510 220 -NLGLPKSTIASAS----------------EDGKVIIWTVAREGDQWEGKVLHDFKT-----------PVYRVSWSLTGN 271 (288)
Q Consensus 220 -~~~~~~~~l~s~s----------------~D~~i~iw~~~~~~~~~~~~~~~~~~~-----------~i~~~~~spdg~ 271 (288)
++ ++++.++ .+..|.+||+.... ...+..+.. .+..++|+|||+
T Consensus 292 ~dg----~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 363 (396)
T 3c5m_A 292 FDG----SLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS----AQKLCKHSTSWDVLDGDRQITHPHPSFTPNDD 363 (396)
T ss_dssp SSS----SEEEEEECCC----------CCCCCCEEEEEETTTTB----CCEEEECCCCCCCBTTBSSTTCCCCEECTTSS
T ss_pred CCC----ceEEEecCCcceeeccccccccCCCCcEEEEecccCc----eEEccCCCCccccccccccCCCCCceEccCCC
Confidence 84 5676654 34689999876432 122233222 256689999999
Q ss_pred EEEEEeC-CCcEEEeE
Q 036510 272 ILAVADG-NNNVTLWE 286 (288)
Q Consensus 272 ~l~s~~~-d~~v~~w~ 286 (288)
.|+.++. ++...||.
T Consensus 364 ~l~~~s~~~~~~~l~~ 379 (396)
T 3c5m_A 364 GVLFTSDFEGVPAIYI 379 (396)
T ss_dssp EEEEEECTTSSCEEEE
T ss_pred eEEEEecCCCCceEEE
Confidence 9887765 56666765
No 179
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.55 E-value=3.2e-12 Score=105.73 Aligned_cols=236 Identities=10% Similarity=0.034 Sum_probs=151.3
Q ss_pred ceEEEEEcCCCCEEE-EeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCc
Q 036510 13 TVHDVAMDYYGKRLA-TASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNE 91 (288)
Q Consensus 13 ~v~~~~~s~~g~~l~-s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~ 91 (288)
...+++++++|++++ +...++.|..|+..... .......+...+.++++.++ +.++++.. ++.|.+|+......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~p~~i~~~~~--g~l~v~~~-~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTG--TTVLPFNGLYQPQGLAVDGA--GTVYVTDF-NNRVVTLAAGSNNQ 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-------EECCCCSCCSCCCEEECTT--CCEEEEET-TTEEEEECTTCSCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcc--cceEeeCCcCCcceeEECCC--CCEEEEcC-CCEEEEEeCCCceE
Confidence 667899999999877 55778889998764321 11111233345778998753 67777666 88999998754321
Q ss_pred eEEeEEee-cCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceeccc
Q 036510 92 WIKDHVFE-DHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSG 170 (288)
Q Consensus 92 ~~~~~~~~-~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~ 170 (288)
..+. .....+.++.+.|+ +.++++...++.|.+|+...... .............+.++|++
T Consensus 100 ----~~~~~~~~~~p~~i~~~~~--g~l~v~~~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~i~~~~~g--------- 161 (270)
T 1rwi_B 100 ----TVLPFDGLNYPEGLAVDTQ--GAVYVADRGNNRVVKLAAGSKTQ---TVLPFTGLNDPDGVAVDNSG--------- 161 (270)
T ss_dssp ----EECCCCSCSSEEEEEECTT--CCEEEEEGGGTEEEEECTTCCSC---EECCCCSCCSCCCEEECTTC---------
T ss_pred ----eeeecCCcCCCcceEECCC--CCEEEEECCCCEEEEEECCCcee---EeeccccCCCceeEEEeCCC---------
Confidence 1122 22256889999987 55667666778898986543221 11111122345667777765
Q ss_pred ccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCccc
Q 036510 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWE 250 (288)
Q Consensus 171 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~ 250 (288)
+++++...++.|.+||...... ......+...+.++.+.|++ .++++...++.|.+|+......
T Consensus 162 -----~l~v~~~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~d~~g----~l~v~~~~~~~v~~~~~~~~~~--- 225 (270)
T 1rwi_B 162 -----NVYVTDTDNNRVVKLEAESNNQ----VVLPFTDITAPWGIAVDEAG----TVYVTEHNTNQVVKLLAGSTTS--- 225 (270)
T ss_dssp -----CEEEEEGGGTEEEEECTTTCCE----EECCCSSCCSEEEEEECTTC----CEEEEETTTSCEEEECTTCSCC---
T ss_pred -----CEEEEECCCCEEEEEecCCCce----EeecccCCCCceEEEECCCC----CEEEEECCCCcEEEEcCCCCcc---
Confidence 5666666678899999765421 11112233557899999873 5677777788999998753211
Q ss_pred ceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 251 GKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 251 ~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
..........+.+++++|+|+++++...+++|++++.
T Consensus 226 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 226 TVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp EECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred eeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence 1111111246889999999998888888999999974
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.49 E-value=1.4e-11 Score=105.66 Aligned_cols=219 Identities=12% Similarity=0.079 Sum_probs=131.8
Q ss_pred ccceEEEEEcCCCCEEEEee---------CCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCC---
Q 036510 11 EDTVHDVAMDYYGKRLATAS---------SDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFD--- 78 (288)
Q Consensus 11 ~~~v~~~~~s~~g~~l~s~~---------~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d--- 78 (288)
-..+...++ ||++|+-.. .++.+.+|++..+. ...+ ..+..++|+|+ |+.|+.++.+
T Consensus 14 ~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~---~~~l----~~~~~~~~SpD--g~~la~~~~~~~~ 82 (347)
T 2gop_A 14 FAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA---RRFI----ENATMPRISPD--GKKIAFMRANEEK 82 (347)
T ss_dssp SCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC---EEEE----ESCEEEEECTT--SSEEEEEEEETTT
T ss_pred eEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc---eEEc----ccCCCeEECCC--CCEEEEEEeccCC
Confidence 356677778 898877642 35678888876543 2233 46788999975 8888887754
Q ss_pred Cc--EEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeC---------------------------CCcEE
Q 036510 79 GT--VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSS---------------------------DGNIS 129 (288)
Q Consensus 79 ~~--v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~---------------------------d~~i~ 129 (288)
+. |.+|++..+. ... +..+.. +..+.|+|+ +..++.++. ...|.
T Consensus 83 ~~~~l~~~~~~~g~---~~~-l~~~~~-~~~~~wspd--g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (347)
T 2gop_A 83 KVSEIWVADLETLS---SKK-ILEAKN-IRSLEWNED--SRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFW 155 (347)
T ss_dssp TEEEEEEEETTTTE---EEE-EEEESE-EEEEEECTT--SSEEEEEEECCCC---------CCCC---------CEEEEE
T ss_pred CcceEEEEECCCCc---eEE-EEcCCC-ccceeECCC--CCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEE
Confidence 34 6666765443 112 222233 899999998 444555542 24688
Q ss_pred EEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecC------C-cEEEEEEeCCceeeeee
Q 036510 130 VFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD------N-TVKVWKLYNGIWKMDCF 202 (288)
Q Consensus 130 i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d------~-~i~iwd~~~~~~~~~~~ 202 (288)
+||+..+...... .. + .+..+.|+|++ +++++..+ . ...||.+.++. .+
T Consensus 156 ~~d~~~~~~~~~l---~~-~-~~~~~~~spdg---------------~~~~~~~~~~~~~~~~~~~l~~~d~~~--~~-- 211 (347)
T 2gop_A 156 IFDTESEEVIEEF---EK-P-RFSSGIWHRDK---------------IVVNVPHREIIPQYFKFWDIYIWEDGK--EE-- 211 (347)
T ss_dssp EEETTTTEEEEEE---EE-E-TTCEEEEETTE---------------EEEEEECCCSSCCSSCCEEEEEEETTE--EE--
T ss_pred EEECCCCeEEeee---cC-C-CcccccCCCCe---------------EEEEEecccccccccccccEEEeCCCc--eE--
Confidence 8887654210111 11 2 67788999874 24444333 1 45566555432 11
Q ss_pred eccccCCcceEEEEecCCCCCCCcEEEEEeCCC--------cEEEEEeecCCCcccceEeeccccCeEE-EEeecCCCEE
Q 036510 203 PALQMHTDWVRDVAWAPNLGLPKSTIASASEDG--------KVIIWTVAREGDQWEGKVLHDFKTPVYR-VSWSLTGNIL 273 (288)
Q Consensus 203 ~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~--------~i~iw~~~~~~~~~~~~~~~~~~~~i~~-~~~spdg~~l 273 (288)
.+..+ ..+..+ +|++ ++|+.++.+. .|.+|| . +. ...+...+...+.. +.|+ || ++
T Consensus 212 -~l~~~-~~~~~~--spdg----~~l~~~~~~~~~~~~~~~~l~~~d-~--~~--~~~l~~~~~~~~~~~~~~s-dg-~~ 276 (347)
T 2gop_A 212 -KMFEK-VSFYAV--DSDG----ERILLYGKPEKKYMSEHNKLYIYD-G--KE--VMGILDEVDRGVGQAKIKD-GK-VY 276 (347)
T ss_dssp -EEEEE-ESEEEE--EECS----SCEEEEECCSSSCCCSSCEEEEEC-S--SC--EEESSTTCCSEEEEEEEET-TE-EE
T ss_pred -EeccC-cceeeE--CCCC----CEEEEEEccccCCccccceEEEEC-C--Cc--eEeccccCCcccCCccEEc-Cc-EE
Confidence 22223 445554 8874 5677776543 577776 2 11 11222334456776 8999 99 99
Q ss_pred EEEeCCCcEEEeEc
Q 036510 274 AVADGNNNVTLWEE 287 (288)
Q Consensus 274 ~s~~~d~~v~~w~~ 287 (288)
++++.++.++|| +
T Consensus 277 ~~~~~~~~~~l~-~ 289 (347)
T 2gop_A 277 FTLFEEGSVNLY-I 289 (347)
T ss_dssp EEEEETTEEEEE-E
T ss_pred EEEecCCcEEEE-E
Confidence 999999999999 5
No 181
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.49 E-value=2.2e-11 Score=105.81 Aligned_cols=243 Identities=10% Similarity=0.046 Sum_probs=141.2
Q ss_pred EEEEcCCCCEEEEee----------CCCcEEEEEeCCCCceeeEEEecc------ccCeEEEEecCCCCCCEEEEeeC--
Q 036510 16 DVAMDYYGKRLATAS----------SDYSIKIIGVGNNTSQHLAKLSGH------KGAVWEVAWAHPKFGSILASCSF-- 77 (288)
Q Consensus 16 ~~~~s~~g~~l~s~~----------~d~~i~lwd~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~~~l~s~s~-- 77 (288)
.+.|+|||++|++++ .+++|.+||.. +.+.+.++..+ ......++++++ |++|+.+..
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~--t~~~~~~i~~~~~~~~~g~~p~~i~~spd--g~~l~v~n~~~ 129 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD--KLTFEKEISLPPKRVQGLNYDGLFRQTTD--GKFIVLQNASP 129 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT--TCCEEEEEEECTTBCCBCCCGGGEEECTT--SSEEEEEEESS
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc--CCcEEEEEEcCccccccCCCcceEEECCC--CCEEEEECCCC
Confidence 789999999998886 36789999974 33455555422 233567889865 888877763
Q ss_pred CCcEEEeecCCCCceEEeEE-eecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEE
Q 036510 78 DGTVIIWKEGNSNEWIKDHV-FEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVS 156 (288)
Q Consensus 78 d~~v~iwd~~~~~~~~~~~~-~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 156 (288)
+++|.+||+.+.. .... +.. .....+.+.|++ ...+++.+.||.+.+|+....+.... .. +.. ..
T Consensus 130 ~~~v~v~d~~~~~---~~~~~i~~--~~~~~v~~~p~~-~~~~~~~~~dg~~~~v~~~~~g~~~~-~~---~~~----~~ 195 (361)
T 2oiz_A 130 ATSIGIVDVAKGD---YVEDVTAA--AGCWSVIPQPNR-PRSFMTICGDGGLLTINLGEDGKVAS-QS---RSK----QM 195 (361)
T ss_dssp SEEEEEEETTTTE---EEEEEGGG--TTEEEEEECTTS-SSEEEEEETTSSEEEEEECTTSSEEE-EE---ECC----CC
T ss_pred CCeEEEEECCCCc---EEEEEecC--CCcceeEEcCCC-CeeEEEECCCCcEEEEEECCCCcEee-ec---ccc----ce
Confidence 6899999997653 2333 321 122335567775 34567788999999998865433221 10 000 01
Q ss_pred eCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceee-eeeeccc---cCCcc----eEEEEecCCCCCCCcEE
Q 036510 157 WAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKM-DCFPALQ---MHTDW----VRDVAWAPNLGLPKSTI 228 (288)
Q Consensus 157 ~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~---~h~~~----V~~v~~sp~~~~~~~~l 228 (288)
|.+.... +......++..++..+.++.+.++|+..+.... ....... .+..+ ..-+.|+|+. ...+
T Consensus 196 ~~~~~~~---~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg---~~ly 269 (361)
T 2oiz_A 196 FSVKDDP---IFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRAS---GRMY 269 (361)
T ss_dssp SCTTTSC---BCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTT---TEEE
T ss_pred EcCCCCc---eEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCC---CeEE
Confidence 1221110 000011112344555678889999986532110 0000000 01111 1126889985 2344
Q ss_pred EEEe----------CCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEcC
Q 036510 229 ASAS----------EDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288 (288)
Q Consensus 229 ~s~s----------~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~~ 288 (288)
++.+ ..++|.+||+...+ ....+... . +..++|+|||++|+++.. ++|.|||.+
T Consensus 270 v~~~~~~~~~~~~~~~~~v~viD~~t~~---~v~~i~~~-~-p~~ia~spdg~~l~v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 270 VFMHPDGKEGTHKFPAAEIWVMDTKTKQ---RVARIPGR-D-ALSMTIDQQRNLMLTLDG-GNVNVYDIS 333 (361)
T ss_dssp EEEESSCCTTCTTCCCSEEEEEETTTTE---EEEEEECT-T-CCEEEEETTTTEEEEECS-SCEEEEECS
T ss_pred EEEccCCCcccccCCCceEEEEECCCCc---EEEEEecC-C-eeEEEECCCCCEEEEeCC-CeEEEEECC
Confidence 4443 13479999976532 12223333 3 889999999999998886 999999953
No 182
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.48 E-value=1.3e-11 Score=117.01 Aligned_cols=247 Identities=13% Similarity=0.034 Sum_probs=142.8
Q ss_pred cccccccceEEEEEcCCCCEEEEeeCC-----CcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCc
Q 036510 6 IETGHEDTVHDVAMDYYGKRLATASSD-----YSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGT 80 (288)
Q Consensus 6 ~~~~h~~~v~~~~~s~~g~~l~s~~~d-----~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~ 80 (288)
+..+|+..+..++|||||++|+.++.+ .+|++||+..+. .+. ...+...+..++|++ + +.|+.++.|+.
T Consensus 157 l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~--~~~-~~~~~~~~~~~~wsp--D-~~l~~~~~~~~ 230 (741)
T 1yr2_A 157 WAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGK--PLA-DELKWVKFSGLAWLG--N-DALLYSRFAEP 230 (741)
T ss_dssp CC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCC--EEE-EEEEEEESCCCEEST--T-SEEEEEECCCC
T ss_pred hccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC--CCC-ccCCCceeccEEEEC--C-CEEEEEEecCc
Confidence 344555578889999999998876654 469999986543 222 111222235788986 3 67777776554
Q ss_pred --------------EEEeecCCCCce-EEeEEeecCCCceeEEEeccCCCCeEEEEEeCC-----CcEEEEeecCCC-C-
Q 036510 81 --------------VIIWKEGNSNEW-IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD-----GNISVFTARADG-G- 138 (288)
Q Consensus 81 --------------v~iwd~~~~~~~-~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d-----~~i~i~d~~~~~-~- 138 (288)
|.+|++.++..- ........+...+..+.|+|+ ++.++..+.+ ..|++||+..+. .
T Consensus 231 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpD--G~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 308 (741)
T 1yr2_A 231 KEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSD--GRWVVITSSEGTDPVNTVHVARVTNGKIGP 308 (741)
T ss_dssp --------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTT--SCEEEEEEECTTCSCCEEEEEEEETTEECC
T ss_pred ccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCC--CCEEEEEEEccCCCcceEEEEECCCCCCcc
Confidence 888888654321 121111223335889999998 5555555433 489999987541 1
Q ss_pred eeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeec----CCcEEEEEEeCCceeeeeeeccccCCcceEE
Q 036510 139 WDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGC----DNTVKVWKLYNGIWKMDCFPALQMHTDWVRD 214 (288)
Q Consensus 139 ~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~----d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~ 214 (288)
+. ....+...+.... +|++ +.|+..+. +..|.+||+.++.. +....+..+...+..
T Consensus 309 ~~---~l~~~~~~~~~~~-~~dg--------------~~l~~~s~~~~~~~~l~~~d~~~~~~--~~~~l~~~~~~~l~~ 368 (741)
T 1yr2_A 309 VT---ALIPDLKAQWDFV-DGVG--------------DQLWFVSGDGAPLKKIVRVDLSGSTP--RFDTVVPESKDNLES 368 (741)
T ss_dssp CE---EEECSSSSCEEEE-EEET--------------TEEEEEECTTCTTCEEEEEECSSSSC--EEEEEECCCSSEEEE
T ss_pred cE---EecCCCCceEEEE-eccC--------------CEEEEEECCCCCCCEEEEEeCCCCcc--ccEEEecCCCCeEEE
Confidence 22 2222333333332 3555 44444433 34588888766310 111112334455777
Q ss_pred EEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeec-cccCeEEEEeecCCCEEEEE----eCCCcEEEeEc
Q 036510 215 VAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHD-FKTPVYRVSWSLTGNILAVA----DGNNNVTLWEE 287 (288)
Q Consensus 215 v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~-~~~~i~~~~~spdg~~l~s~----~~d~~v~~w~~ 287 (288)
+.|+. +.++++...|+..+||........ ...+.. ....+..++++||++.|+.. ...++|.+||+
T Consensus 369 ~~~~~-----~~lv~~~~~dg~~~l~~~~~~g~~--~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 369 VGIAG-----NRLFASYIHDAKSQVLAFDLDGKP--AGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp EEEEB-----TEEEEEEEETTEEEEEEEETTSCE--EEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred EEEEC-----CEEEEEEEECCEEEEEEEeCCCCc--eeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 88873 357888899999888877632211 122221 23568889999999866633 23478888885
No 183
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.48 E-value=1.5e-11 Score=105.39 Aligned_cols=214 Identities=14% Similarity=0.132 Sum_probs=144.7
Q ss_pred cccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEE---------eccccCeEEEEecCCCCCCEEEEee-CCC
Q 036510 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKL---------SGHKGAVWEVAWAHPKFGSILASCS-FDG 79 (288)
Q Consensus 10 h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~---------~~h~~~v~~~~~~~~~~~~~l~s~s-~d~ 79 (288)
+-....+++++++|+++++...++.|+.|+.++.. ..+..+ .++......++++++ ++.++++.+ .++
T Consensus 89 ~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~-~g~lyv~d~~~~~ 166 (329)
T 3fvz_A 89 LFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPS-TGAVFVSDGYCNS 166 (329)
T ss_dssp TCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTT-TCCEEEEECSSCC
T ss_pred ccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCC-CCeEEEEeCCCCC
Confidence 33467889999999999998889999999975431 134444 345556889999862 478888887 799
Q ss_pred cEEEeecCCCCceEEeEEee----------cCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCC
Q 036510 80 TVIIWKEGNSNEWIKDHVFE----------DHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHP 149 (288)
Q Consensus 80 ~v~iwd~~~~~~~~~~~~~~----------~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~ 149 (288)
.|++|+. ++. ....+. .+......++++|+. +.++++...++.|++|+..++. .........+.
T Consensus 167 ~I~~~~~-~g~---~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~-g~l~v~d~~~~~I~~~~~~~G~-~~~~~~~~~~~ 240 (329)
T 3fvz_A 167 RIVQFSP-SGK---FVTQWGEESSGSSPRPGQFSVPHSLALVPHL-DQLCVADRENGRIQCFKTDTKE-FVREIKHASFG 240 (329)
T ss_dssp EEEEECT-TSC---EEEEECEECCSSSCCTTEESCEEEEEEETTT-TEEEEEETTTTEEEEEETTTCC-EEEEECCTTTT
T ss_pred eEEEEcC-CCC---EEEEeccCCCCCCCCCcccCCCcEEEEECCC-CEEEEEECCCCEEEEEECCCCc-EEEEEeccccC
Confidence 9999984 333 122232 122347899999874 5677788888999999987443 22111123455
Q ss_pred CCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEE
Q 036510 150 VGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIA 229 (288)
Q Consensus 150 ~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~ 229 (288)
..+..+.|+| + .++.. +++..++...+..|++||..++... ..+....++......|+++|++ .+++
T Consensus 241 ~~~~~~~~~p-g---~~~~~----~g~~~v~~~~~~~v~~~~~~~g~~~-~~~~~~~~~~~~p~~ia~~~dG----~lyv 307 (329)
T 3fvz_A 241 RNVFAISYIP-G---FLFAV----NGKPYFGDQEPVQGFVMNFSSGEII-DVFKPVRKHFDMPHDIVASEDG----TVYI 307 (329)
T ss_dssp TCEEEEEEET-T---EEEEE----ECCCCTTCSCCCCEEEEETTTCCEE-EEECCSSSCCSSEEEEEECTTS----EEEE
T ss_pred CCcceeeecC-C---EEEEe----CCCEEeccCCCcEEEEEEcCCCeEE-EEEcCCCCccCCeeEEEECCCC----CEEE
Confidence 6788899988 2 11111 1234445556778999998776321 1111114566678999999984 6888
Q ss_pred EEeCCCcEEEEEeec
Q 036510 230 SASEDGKVIIWTVAR 244 (288)
Q Consensus 230 s~s~D~~i~iw~~~~ 244 (288)
+...++.|++|++..
T Consensus 308 ad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 308 GDAHTNTVWKFTLTE 322 (329)
T ss_dssp EESSSCCEEEEEEEE
T ss_pred EECCCCEEEEEeCCc
Confidence 889999999999874
No 184
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.46 E-value=5.4e-10 Score=93.25 Aligned_cols=241 Identities=9% Similarity=-0.030 Sum_probs=157.3
Q ss_pred ccccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCC
Q 036510 9 GHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGN 88 (288)
Q Consensus 9 ~h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~ 88 (288)
.+...+.++.++++|+++++...++.|..|+.. +... ...+..+...+.++++.+ ++.++++...++.|..|+..
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~~~~- 86 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-EYPLPTPDAKVMCLTISS--DGEVWFTENAANKIGRITKK- 86 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EEECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECTT-
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-EecCCcccCceeeEEECC--CCCEEEeCCCCCeEEEECCC-
Confidence 455678999999999988877778899999875 3221 112223456788999875 37888887778999999875
Q ss_pred CCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceec
Q 036510 89 SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG 168 (288)
Q Consensus 89 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~ 168 (288)
+. . ....++.....+.++.+.|+ +.++++...++.|..||. .+ ..... ........+..+.++|++
T Consensus 87 g~-~-~~~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~d~-~g-~~~~~-~~~~~~~~~~~i~~~~~g------- 152 (299)
T 2z2n_A 87 GI-I-KEYTLPNPDSAPYGITEGPN--GDIWFTEMNGNRIGRITD-DG-KIREY-ELPNKGSYPSFITLGSDN------- 152 (299)
T ss_dssp SC-E-EEEECSSTTCCEEEEEECTT--SCEEEEETTTTEEEEECT-TC-CEEEE-ECSSTTCCEEEEEECTTS-------
T ss_pred Cc-E-EEEeCCCcCCCceeeEECCC--CCEEEEecCCceEEEECC-CC-CEEEe-cCCCCCCCCceEEEcCCC-------
Confidence 22 2 11222234456889999886 566666666788999987 32 22221 112233457788888775
Q ss_pred ccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCc
Q 036510 169 SGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQ 248 (288)
Q Consensus 169 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~ 248 (288)
++.++...++.|..||. ++.. ... .+..+...+..+.+.+++ .+.++...++.|..|+. ... .
T Consensus 153 -------~l~v~~~~~~~i~~~~~-~g~~--~~~-~~~~~~~~~~~i~~~~~g----~l~v~~~~~~~i~~~~~-~g~-~ 215 (299)
T 2z2n_A 153 -------ALWFTENQNNAIGRITE-SGDI--TEF-KIPTPASGPVGITKGNDD----ALWFVEIIGNKIGRITT-SGE-I 215 (299)
T ss_dssp -------CEEEEETTTTEEEEECT-TCCE--EEE-ECSSTTCCEEEEEECTTS----SEEEEETTTTEEEEECT-TCC-E
T ss_pred -------CEEEEeCCCCEEEEEcC-CCcE--EEe-eCCCCCCcceeEEECCCC----CEEEEccCCceEEEECC-CCc-E
Confidence 55666656778989987 5421 111 122334457889999873 56766667889999987 321 1
Q ss_pred ccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 249 WEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 249 ~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
...........+..++++|+|+.+++...++.|..||
T Consensus 216 -~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d 252 (299)
T 2z2n_A 216 -TEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLT 252 (299)
T ss_dssp -EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEE
T ss_pred -EEEECCCCCCCceeEEECCCCCEEEeccCCceEEEEC
Confidence 1111112235688999999999776665778888887
No 185
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.44 E-value=9.6e-11 Score=97.80 Aligned_cols=197 Identities=18% Similarity=0.155 Sum_probs=132.8
Q ss_pred ccccceEEEEE-cCCCCEEEEeeC-CCcEEEEEeCCCCceeeEEEe-ccccCeEEEEecCCCCCCEEEEeeCCCcEEEee
Q 036510 9 GHEDTVHDVAM-DYYGKRLATASS-DYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWK 85 (288)
Q Consensus 9 ~h~~~v~~~~~-s~~g~~l~s~~~-d~~i~lwd~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd 85 (288)
+|...+.++++ .++|+++++... ++.|++|+.+ ++.+..+. .+...+.+++++++ ++++++.+.++.|.+|+
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~---g~~~~~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~ 148 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY---GQFVRKFGATILQHPRGVTVDNK--GRIIVVECKVMRVIIFD 148 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT---SCEEEEECTTTCSCEEEEEECTT--SCEEEEETTTTEEEEEC
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC---CcEEEEecCccCCCceEEEEeCC--CCEEEEECCCCEEEEEc
Confidence 35567789999 577877776643 8899999843 23444453 34456889999764 78888888899999998
Q ss_pred cCCCCceEEeEEee--cCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEee-ccCCCCeeEEEeCCCCC
Q 036510 86 EGNSNEWIKDHVFE--DHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRID-QAHPVGVTSVSWAPSTA 162 (288)
Q Consensus 86 ~~~~~~~~~~~~~~--~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~v~~i~~~p~~~ 162 (288)
.. +. ....+. .+...+.+++++|+ +.++++...++.|++|+... .. ..... .++......+.++|++
T Consensus 149 ~~-g~---~~~~~~~~~~~~~p~~i~~~~~--g~l~v~~~~~~~i~~~~~~g--~~-~~~~~~~g~~~~p~~i~~d~~G- 218 (286)
T 1q7f_A 149 QN-GN---VLHKFGCSKHLEFPNGVVVNDK--QEIFISDNRAHCVKVFNYEG--QY-LRQIGGEGITNYPIGVGINSNG- 218 (286)
T ss_dssp TT-SC---EEEEEECTTTCSSEEEEEECSS--SEEEEEEGGGTEEEEEETTC--CE-EEEESCTTTSCSEEEEEECTTC-
T ss_pred CC-CC---EEEEeCCCCccCCcEEEEECCC--CCEEEEECCCCEEEEEcCCC--CE-EEEEccCCccCCCcEEEECCCC-
Confidence 64 33 222332 34456899999997 56777777889999999632 11 11111 1223457788888876
Q ss_pred CCceecccccCCCceeEEeecCC-cEEEEEEeCCceeeeeeeccccCC--cceEEEEecCCCCCCCcEEEEEeCCCcEEE
Q 036510 163 PGALVGSGFLDPVQKLCSGGCDN-TVKVWKLYNGIWKMDCFPALQMHT--DWVRDVAWAPNLGLPKSTIASASEDGKVII 239 (288)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~d~-~i~iwd~~~~~~~~~~~~~~~~h~--~~V~~v~~sp~~~~~~~~l~s~s~D~~i~i 239 (288)
+++++...++ .|.+||.. +. .+..+..+. ..+.+++++|++ +++++ +.|+.|++
T Consensus 219 -------------~l~v~~~~~~~~i~~~~~~-g~----~~~~~~~~~~~~~~~~i~~~~~g----~l~vs-~~~~~v~v 275 (286)
T 1q7f_A 219 -------------EILIADNHNNFNLTIFTQD-GQ----LISALESKVKHAQCFDVALMDDG----SVVLA-SKDYRLYI 275 (286)
T ss_dssp -------------CEEEEECSSSCEEEEECTT-SC----EEEEEEESSCCSCEEEEEEETTT----EEEEE-ETTTEEEE
T ss_pred -------------CEEEEeCCCCEEEEEECCC-CC----EEEEEcccCCCCcceeEEECCCC----cEEEE-CCCCeEEE
Confidence 6677777775 99999953 32 222333332 247799999974 56666 67999999
Q ss_pred EEee
Q 036510 240 WTVA 243 (288)
Q Consensus 240 w~~~ 243 (288)
|+..
T Consensus 276 ~~~~ 279 (286)
T 1q7f_A 276 YRYV 279 (286)
T ss_dssp EECS
T ss_pred EEcc
Confidence 9875
No 186
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.43 E-value=6e-10 Score=93.93 Aligned_cols=245 Identities=9% Similarity=0.032 Sum_probs=146.5
Q ss_pred cceEEEEEcCCCCEEEE-------eeCCCcEEEEEeCCCCceeeEE--EeccccCeEEEEecCCCCCCEEEEeeCCCcEE
Q 036510 12 DTVHDVAMDYYGKRLAT-------ASSDYSIKIIGVGNNTSQHLAK--LSGHKGAVWEVAWAHPKFGSILASCSFDGTVI 82 (288)
Q Consensus 12 ~~v~~~~~s~~g~~l~s-------~~~d~~i~lwd~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~ 82 (288)
....+++|+++|+++++ +..++.|.+|+...+....+.. ..++...+.+++++++ .+.++++.. ++.|.
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~-~g~l~v~~~-~~~l~ 95 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRD-ANQLFVADM-RLGLL 95 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSS-SSEEEEEET-TTEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecC-CCcEEEEEC-CCCEE
Confidence 45578899999988888 6778899999864432211110 0125567889998743 155555544 44788
Q ss_pred EeecCCCCceEEe-EEe-e-cCCCceeEEEeccCCCCeEEEEEeCC---------------CcEEEEeecCCCCeeeEEe
Q 036510 83 IWKEGNSNEWIKD-HVF-E-DHKSSVNSIDWAPHELGLCLACGSSD---------------GNISVFTARADGGWDTSRI 144 (288)
Q Consensus 83 iwd~~~~~~~~~~-~~~-~-~h~~~v~~l~~~p~~~~~~l~sg~~d---------------~~i~i~d~~~~~~~~~~~~ 144 (288)
+|+.. +. .... ... . .....+.++.+.|+ +.++++...+ +.|..|+.. +.....
T Consensus 96 ~~d~~-g~-~~~~~~~~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~~~-- 167 (314)
T 1pjx_A 96 VVQTD-GT-FEEIAKKDSEGRRMQGCNDCAFDYE--GNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQMIQV-- 167 (314)
T ss_dssp EEETT-SC-EEECCSBCTTSCBCBCCCEEEECTT--SCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SCEEEE--
T ss_pred EEeCC-CC-EEEEEeccCCCccccCCcCEEECCC--CCEEEEecCcccccccccccccCCCCeEEEECCC--CCEEEe--
Confidence 89876 43 2111 100 0 11235789999987 5555555443 455555543 222211
Q ss_pred eccCCCCeeEEEeC----CCCCCCceecccccCCCceeEEeecCCcEEEEEEe-CCce-eeeeeeccccCC-cceEEEEe
Q 036510 145 DQAHPVGVTSVSWA----PSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLY-NGIW-KMDCFPALQMHT-DWVRDVAW 217 (288)
Q Consensus 145 ~~~~~~~v~~i~~~----p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~-~~~~~~~~~~h~-~~V~~v~~ 217 (288)
..+......+.|+ |++. .++++...++.|.+||.. .+.. ..+....+.++. .....+.+
T Consensus 168 -~~~~~~~~~i~~~~~~d~dg~-------------~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~ 233 (314)
T 1pjx_A 168 -DTAFQFPNGIAVRHMNDGRPY-------------QLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDF 233 (314)
T ss_dssp -EEEESSEEEEEEEECTTSCEE-------------EEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEE
T ss_pred -ccCCCCcceEEEecccCCCCC-------------EEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEE
Confidence 1112235677777 7651 234555667899999986 3321 111223334443 55788999
Q ss_pred cCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEe-CCCcEEEeEc
Q 036510 218 APNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVAD-GNNNVTLWEE 287 (288)
Q Consensus 218 sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~-~d~~v~~w~~ 287 (288)
++++ .+.++...++.|.+||.+.... ...+......+.+++|+|||+.|.+++ .++.|..|+.
T Consensus 234 d~~G----~l~v~~~~~~~i~~~d~~~g~~---~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 234 DEDN----NLLVANWGSSHIEVFGPDGGQP---KMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp BTTC----CEEEEEETTTEEEEECTTCBSC---SEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCC----CEEEEEcCCCEEEEEcCCCCcE---eEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 9974 6777777888999998753211 122233336789999999999655554 5678888874
No 187
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.41 E-value=3.1e-11 Score=113.70 Aligned_cols=233 Identities=10% Similarity=-0.035 Sum_probs=140.2
Q ss_pred cCCCCEEEEeeCCC---cEEEEEeC--CCCceeeEEE----eccccCeEEEEecCCCCCCEEE-----EeeCCCcEEEee
Q 036510 20 DYYGKRLATASSDY---SIKIIGVG--NNTSQHLAKL----SGHKGAVWEVAWAHPKFGSILA-----SCSFDGTVIIWK 85 (288)
Q Consensus 20 s~~g~~l~s~~~d~---~i~lwd~~--~~~~~~~~~~----~~h~~~v~~~~~~~~~~~~~l~-----s~s~d~~v~iwd 85 (288)
+|+|++++-...++ ...||-.+ .+..+.+... .+|...+..++|||+ |++|+ +|+.+.+|++||
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPD--G~~la~~~~~~G~~~~~i~v~d 153 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWD--GKKVAFAQKPNAADEAVLHVID 153 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTT--SSEEEEEEEETTCSCCEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCC--CCEEEEEECCCCCceEEEEEEE
Confidence 47898887766654 34566543 2222222111 145567899999965 88888 555668999999
Q ss_pred cCCCCceEEeEEeecCCCce--eEEEeccCCCCeEEEEEeCCCc-------------EEEEeecCCCCee-eEEeeccCC
Q 036510 86 EGNSNEWIKDHVFEDHKSSV--NSIDWAPHELGLCLACGSSDGN-------------ISVFTARADGGWD-TSRIDQAHP 149 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v--~~l~~~p~~~~~~l~sg~~d~~-------------i~i~d~~~~~~~~-~~~~~~~~~ 149 (288)
+.++... . ..+...+ ..++|+|+ +..++.++.|.. |++|++.++..-. .......|+
T Consensus 154 l~tg~~~---~--~~~~~~~~~~~~~wspD--g~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~ 226 (695)
T 2bkl_A 154 VDSGEWS---K--VDVIEGGKYATPKWTPD--SKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDP 226 (695)
T ss_dssp TTTCCBC---S--SCCBSCCTTCCCEECTT--SSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCT
T ss_pred CCCCCCc---C--CcccCcccccceEEecC--CCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCC
Confidence 9876521 0 1122222 68999998 566777777765 9999987653211 112223455
Q ss_pred CCeeEEEeCCCCCCCceecccccCCCceeEEeecCC----cEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCC
Q 036510 150 VGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDN----TVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPK 225 (288)
Q Consensus 150 ~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~----~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~ 225 (288)
..+..+.|+|++ ++|+.++.++ .|.+||..++. ...+..+...+....| |++
T Consensus 227 ~~~~~~~~SpDG--------------~~l~~~~~~~~~~~~l~~~~~~~~~-----~~~l~~~~~~~~~~~~-~~g---- 282 (695)
T 2bkl_A 227 TTFLQSDLSRDG--------------KYLFVYILRGWSENDVYWKRPGEKD-----FRLLVKGVGAKYEVHA-WKD---- 282 (695)
T ss_dssp TCEEEEEECTTS--------------CCEEEEEEETTTEEEEEEECTTCSS-----CEEEEECSSCCEEEEE-ETT----
T ss_pred EEEEEEEECCCC--------------CEEEEEEeCCCCceEEEEEcCCCCc-----eEEeecCCCceEEEEe-cCC----
Confidence 678899999998 4555554444 45555432221 2233445555566666 442
Q ss_pred cEEEEEeC---CCcEEEEEeecCCCcccceEeecc-ccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 226 STIASASE---DGKVIIWTVAREGDQWEGKVLHDF-KTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 226 ~~l~s~s~---D~~i~iw~~~~~~~~~~~~~~~~~-~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
.+++.... ++.|.+|++.......-..++... ...+..++|+ ++.++++...|+..+||.
T Consensus 283 ~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~ 346 (695)
T 2bkl_A 283 RFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRV 346 (695)
T ss_dssp EEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred cEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEE
Confidence 44444442 578999987543210001232222 3457888998 788889999999998885
No 188
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.40 E-value=1.3e-10 Score=97.18 Aligned_cols=217 Identities=12% Similarity=0.041 Sum_probs=135.9
Q ss_pred CCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccc-cCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeec
Q 036510 22 YGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHK-GAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED 100 (288)
Q Consensus 22 ~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~ 100 (288)
.+++|++++.|+.|.+||.. +++.+.++..+. ..+.++.++++ |++|+ +.++.|..||. +++ .+..+..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~--tG~~~w~~~~~~~~~~~~~~~~pd--G~ilv--s~~~~V~~~d~-~G~---~~W~~~~ 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKD--TKEIVWEYPLEKGWECNSVAATKA--GEILF--SYSKGAKMITR-DGR---ELWNIAA 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETT--TTEEEEEEECCTTCCCCEEEECTT--SCEEE--ECBSEEEEECT-TSC---EEEEEEC
T ss_pred CCcEEEeeCCCCEEEEEECC--CCeEEEEeCCCccCCCcCeEECCC--CCEEE--eCCCCEEEECC-CCC---EEEEEcC
Confidence 46799999999999999973 457788887766 46788888764 88888 45788999998 554 3344544
Q ss_pred C-CCceeEEEeccCCCCeEEEEEeC-CCcEEEEeecCCCCeeeEEeec---cCCCCeeEEEeCCCCCCCceecccccCCC
Q 036510 101 H-KSSVNSIDWAPHELGLCLACGSS-DGNISVFTARADGGWDTSRIDQ---AHPVGVTSVSWAPSTAPGALVGSGFLDPV 175 (288)
Q Consensus 101 h-~~~v~~l~~~p~~~~~~l~sg~~-d~~i~i~d~~~~~~~~~~~~~~---~~~~~v~~i~~~p~~~~~~~~~~~~~~~~ 175 (288)
+ ...+.++.+.|+ +.++++.+. ++.|..++. ++.......... .+......+...++ +
T Consensus 74 ~~~~~~~~~~~~~d--G~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~--------------G 136 (276)
T 3no2_A 74 PAGCEMQTARILPD--GNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKK--------------G 136 (276)
T ss_dssp CTTCEEEEEEECTT--SCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTT--------------S
T ss_pred CCCccccccEECCC--CCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCC--------------C
Confidence 3 346788888887 666776665 555655553 222111111110 01011222333343 4
Q ss_pred ceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEee
Q 036510 176 QKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLH 255 (288)
Q Consensus 176 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~ 255 (288)
+++++...++.|..||.. +. .+..+..+ ....++...++ +.++++++.++.|..+|....+..++... .
T Consensus 137 ~~lv~~~~~~~v~~~d~~-G~----~~w~~~~~-~~~~~~~~~~~----g~~~v~~~~~~~v~~~d~~tG~~~w~~~~-~ 205 (276)
T 3no2_A 137 NYLVPLFATSEVREIAPN-GQ----LLNSVKLS-GTPFSSAFLDN----GDCLVACGDAHCFVQLNLESNRIVRRVNA-N 205 (276)
T ss_dssp CEEEEETTTTEEEEECTT-SC----EEEEEECS-SCCCEEEECTT----SCEEEECBTTSEEEEECTTTCCEEEEEEG-G
T ss_pred CEEEEecCCCEEEEECCC-CC----EEEEEECC-CCccceeEcCC----CCEEEEeCCCCeEEEEeCcCCcEEEEecC-C
Confidence 788999999999999976 52 33333332 23456677776 36788888888898888764322221110 1
Q ss_pred ccc----cCeEEEEeecCCCEEEEE
Q 036510 256 DFK----TPVYRVSWSLTGNILAVA 276 (288)
Q Consensus 256 ~~~----~~i~~~~~spdg~~l~s~ 276 (288)
+.. ..+..++..++|+.+++.
T Consensus 206 ~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 206 DIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp GSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCCCccccccccceEcCCCCEEEEe
Confidence 111 236788888899888776
No 189
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.39 E-value=2e-11 Score=106.37 Aligned_cols=176 Identities=13% Similarity=0.027 Sum_probs=124.7
Q ss_pred ceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCC---------ceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEE
Q 036510 13 TVHDVAMDYYGKRLATASSDYSIKIIGVGNNT---------SQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83 (288)
Q Consensus 13 ~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~---------~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~i 83 (288)
.++.+++++...++++|+.+ .+.+|++..-. .+... ...+.. |+.++| + +.+|+.+ .++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~-~~~lp~-V~~l~f--d--~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKW-EKEIPD-VIFVCF--H--GDQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSE-EEECTT-EEEEEE--E--TTEEEEE-ESSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceE-EeeCCC-eeEEEE--C--CCEEEEE-cCCcEEE
Confidence 57889999999999999998 55669763211 11112 234566 999999 3 7888888 8899999
Q ss_pred eecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCC
Q 036510 84 WKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163 (288)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~ 163 (288)
||+.+... ......|..++.++.+.+. . ++.+..||.|.+||++++... . +...|++++|+|.+
T Consensus 111 ~dv~sl~~---~~~~~~~~~~v~~i~~~~p---~-~av~~~dG~L~v~dl~~~~~~---~----~~~~Vs~v~WSpkG-- 174 (388)
T 1xip_A 111 LDLEELSE---FRTVTSFEKPVFQLKNVNN---T-LVILNSVNDLSALDLRTKSTK---Q----LAQNVTSFDVTNSQ-- 174 (388)
T ss_dssp EESSSTTC---EEEEEECSSCEEEEEECSS---E-EEEEETTSEEEEEETTTCCEE---E----EEESEEEEEECSSE--
T ss_pred EEchhhhc---cCccceeecceeeEEecCC---C-EEEEECCCCEEEEEccCCccc---c----ccCCceEEEEcCCc--
Confidence 99876542 2234567778888877653 2 777899999999999865421 1 23479999999975
Q ss_pred CceecccccCCCceeEEeecCCcEEEEEEeCCce--e--eeeeeccc---cCCcceEEEEecCCCCCCCcEEEE
Q 036510 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIW--K--MDCFPALQ---MHTDWVRDVAWAPNLGLPKSTIAS 230 (288)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--~--~~~~~~~~---~h~~~V~~v~~sp~~~~~~~~l~s 230 (288)
++.|..|+++++|+...... . +.+...+. +|...|.+|.|.++. .++++
T Consensus 175 --------------~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~----~flv~ 230 (388)
T 1xip_A 175 --------------LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ----DFLAV 230 (388)
T ss_dssp --------------EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS----EEEEE
T ss_pred --------------eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCC----eEEEE
Confidence 67788999999999877532 1 11111223 477889999999973 45555
No 190
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.38 E-value=1.2e-10 Score=109.87 Aligned_cols=234 Identities=13% Similarity=0.021 Sum_probs=138.3
Q ss_pred CCCCEEEEeeCCC---cEEEEEeC--CCCceeeEE----EeccccCeEEEEecCCCCCCEEEEeeCCC-----cEEEeec
Q 036510 21 YYGKRLATASSDY---SIKIIGVG--NNTSQHLAK----LSGHKGAVWEVAWAHPKFGSILASCSFDG-----TVIIWKE 86 (288)
Q Consensus 21 ~~g~~l~s~~~d~---~i~lwd~~--~~~~~~~~~----~~~h~~~v~~~~~~~~~~~~~l~s~s~d~-----~v~iwd~ 86 (288)
|+|++++-...++ .-.||-.+ .+..+.+.. -.+|...+..++|||+ |++|+.++.++ +|++||+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPD--g~~la~~~~~~G~~~~~i~v~d~ 158 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSED--GEYFAYGLSASGSDWVTIKFMKV 158 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTT--SSEEEEEEEETTCSCEEEEEEET
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCC--CCEEEEEEcCCCCceEEEEEEEC
Confidence 7888776544332 12455443 222222211 1134456889999965 88888665543 8999999
Q ss_pred CCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCc----------------EEEEeecCCCCeeeEE-eeccCC
Q 036510 87 GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN----------------ISVFTARADGGWDTSR-IDQAHP 149 (288)
Q Consensus 87 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~----------------i~i~d~~~~~~~~~~~-~~~~~~ 149 (288)
.++... . ..+.. ..+..++|+|| +..++.++.++. |++|++.++....... ....|+
T Consensus 159 ~tg~~~-~-~~~~~--~~~~~~~wspD--g~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~ 232 (710)
T 2xdw_A 159 DGAKEL-P-DVLER--VKFSCMAWTHD--GKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEP 232 (710)
T ss_dssp TTTEEE-E-EEEEE--ECSCCEEECTT--SSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCT
T ss_pred CCCCCC-c-ccccC--cccceEEEEeC--CCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCC
Confidence 776421 1 12221 23678999998 556666766655 9999986643211111 122355
Q ss_pred CCeeEEEeCCCCCCCceecccccCCCceeEEeec-----CCcEEEEEEeC------CceeeeeeeccccCCcceEEEEec
Q 036510 150 VGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGC-----DNTVKVWKLYN------GIWKMDCFPALQMHTDWVRDVAWA 218 (288)
Q Consensus 150 ~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~-----d~~i~iwd~~~------~~~~~~~~~~~~~h~~~V~~v~~s 218 (288)
..+..+.|+|++ ++|+..+. +..|.+||+.+ +.. ....+..+...+.. .|+
T Consensus 233 ~~~~~~~~SpDg--------------~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~---~~~~l~~~~~~~~~-~~s 294 (710)
T 2xdw_A 233 KWMGGAELSDDG--------------RYVLLSIREGCDPVNRLWYCDLQQESNGITGIL---KWVKLIDNFEGEYD-YVT 294 (710)
T ss_dssp TCEEEEEECTTS--------------CEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC---CCEEEECSSSSCEE-EEE
T ss_pred eEEEEEEEcCCC--------------CEEEEEEEccCCCccEEEEEECcccccccCCcc---ceEEeeCCCCcEEE-EEe
Confidence 567889999998 45554433 56799999875 321 12233445555554 477
Q ss_pred CCCCCCCcEEEEEeC-C---CcEEEEEeecCCCcccceEeeccc--cCeEEEEeecCCCEEEEEeCCCcEEEe
Q 036510 219 PNLGLPKSTIASASE-D---GKVIIWTVAREGDQWEGKVLHDFK--TPVYRVSWSLTGNILAVADGNNNVTLW 285 (288)
Q Consensus 219 p~~~~~~~~l~s~s~-D---~~i~iw~~~~~~~~~~~~~~~~~~--~~i~~~~~spdg~~l~s~~~d~~v~~w 285 (288)
|++ ..|+..+. + ..|.+|++..... .....+..+. ..+..++|++++.++++...|+..+||
T Consensus 295 ~dg----~~l~~~s~~~~~~~~l~~~d~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~ 362 (710)
T 2xdw_A 295 NEG----TVFTFKTNRHSPNYRLINIDFTDPEE-SKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQ 362 (710)
T ss_dssp EET----TEEEEEECTTCTTCEEEEEETTSCCG-GGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEE
T ss_pred ccC----CEEEEEECCCCCCCEEEEEeCCCCCc-ccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEE
Confidence 874 44554443 3 3588888764321 0112333332 267889999888899999888865554
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.38 E-value=2.3e-09 Score=98.39 Aligned_cols=249 Identities=12% Similarity=0.076 Sum_probs=154.6
Q ss_pred ceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecC---CCCCCEEEE-eeCCCcEEEeecCC
Q 036510 13 TVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAH---PKFGSILAS-CSFDGTVIIWKEGN 88 (288)
Q Consensus 13 ~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~~~l~s-~s~d~~v~iwd~~~ 88 (288)
.+..+.|+|||++|++++.|+.|.+||+...+.+.+.++..... ...++|++ + +|++++. .-.++++.++|..+
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~p-DGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGW-EDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTC-TTTEEEEEEEETTEEEEEETTT
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCC-CCCEEEEEEccCCeEEEEECCC
Confidence 45688999999999999999999999984223455666654333 47899983 2 3666654 45679999999766
Q ss_pred CCceEEeEEeec----------CCC-ceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEe
Q 036510 89 SNEWIKDHVFED----------HKS-SVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSW 157 (288)
Q Consensus 89 ~~~~~~~~~~~~----------h~~-~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~ 157 (288)
.+. ...+.. |.. .+..+..+++. ...++....+|.|.++|...........+ ........+.|
T Consensus 276 ~~~---~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~-~~~vv~~~~~g~v~~vd~~~~~~~~v~~i--~~~~~~~d~~~ 349 (567)
T 1qks_A 276 LEP---KKIQSTRGMTYDEQEYHPEPRVAAILASHYR-PEFIVNVKETGKILLVDYTDLNNLKTTEI--SAERFLHDGGL 349 (567)
T ss_dssp CCE---EEEEECCEECTTTCCEESCCCEEEEEECSSS-SEEEEEETTTTEEEEEETTCSSEEEEEEE--ECCSSEEEEEE
T ss_pred CcE---EEEEeccccccccccccCCCceEEEEEcCCC-CEEEEEecCCCeEEEEecCCCccceeeee--eccccccCceE
Confidence 542 222221 112 56777777764 44566667788999998765432222121 22334667889
Q ss_pred CCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeec--cccCCcceEEEEecCCCCCCCcEEEEEe-CC
Q 036510 158 APSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPA--LQMHTDWVRDVAWAPNLGLPKSTIASAS-ED 234 (288)
Q Consensus 158 ~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~~~h~~~V~~v~~sp~~~~~~~~l~s~s-~D 234 (288)
+|++. .++++...++.|.++|+.++... ..+.. -.-|...--.+ ++|+. +...++.. .+
T Consensus 350 ~pdgr-------------~~~va~~~sn~V~ViD~~t~kl~-~~i~vgg~~Phpg~g~~~-~~p~~---g~v~~t~~~g~ 411 (567)
T 1qks_A 350 DGSHR-------------YFITAANARNKLVVIDTKEGKLV-AIEDTGGQTPHPGRGANF-VHPTF---GPVWATSHMGD 411 (567)
T ss_dssp CTTSC-------------EEEEEEGGGTEEEEEETTTTEEE-EEEECSSSSBCCTTCEEE-EETTT---EEEEEEEBSSS
T ss_pred CCCCC-------------EEEEEeCCCCeEEEEECCCCcEE-EEEeccCcCCCCccceee-ECCCC---CcEEEeCCCCC
Confidence 99873 34566667889999999876311 11211 12243221122 57764 23445554 57
Q ss_pred CcEEEEEeecCCCc---c-cceEeeccccCeEEEEeecCCCEEEEEeC-------CCcEEEeEc
Q 036510 235 GKVIIWTVAREGDQ---W-EGKVLHDFKTPVYRVSWSLTGNILAVADG-------NNNVTLWEE 287 (288)
Q Consensus 235 ~~i~iw~~~~~~~~---~-~~~~~~~~~~~i~~~~~spdg~~l~s~~~-------d~~v~~w~~ 287 (288)
++|.+++....+.+ + ....+......-..++.+||++++.+... .++|.|+|+
T Consensus 412 ~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~ 475 (567)
T 1qks_A 412 DSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDI 475 (567)
T ss_dssp SEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEG
T ss_pred CeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEEC
Confidence 89999998753211 1 11233322223356889999999988763 358999985
No 192
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.37 E-value=1.5e-10 Score=97.21 Aligned_cols=207 Identities=14% Similarity=0.092 Sum_probs=131.3
Q ss_pred eeEEEeccccCeEEEEecCCCCCC-EEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC
Q 036510 47 HLAKLSGHKGAVWEVAWAHPKFGS-ILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125 (288)
Q Consensus 47 ~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d 125 (288)
.+..+..+.....+++|+++ ++ +++++..++.|..|+...+ . ..+..+...+.++.++|+ +.++++...+
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~--g~~l~~~~~~~~~i~~~~~~~~--~---~~~~~~~~~~~~l~~~~d--g~l~v~~~~~ 89 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPA--RSAVIFSDVRQNRTWAWSDDGQ--L---SPEMHPSHHQNGHCLNKQ--GHLIACSHGL 89 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGG--GTEEEEEEGGGTEEEEEETTSC--E---EEEESSCSSEEEEEECTT--CCEEEEETTT
T ss_pred cEEEEecCCccccCCeEeCC--CCEEEEEeCCCCEEEEEECCCC--e---EEEECCCCCcceeeECCC--CcEEEEecCC
Confidence 34555566667788999864 66 7888899999999998654 2 234456678999999997 5666666667
Q ss_pred CcEEEEeecCCCCeeeEE-eecc-CCCCeeEEEeCCCCCCCceecccccCCCceeEE----eec-----------CCcEE
Q 036510 126 GNISVFTARADGGWDTSR-IDQA-HPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS----GGC-----------DNTVK 188 (288)
Q Consensus 126 ~~i~i~d~~~~~~~~~~~-~~~~-~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s----~~~-----------d~~i~ 188 (288)
+.|.+||..++. ..... .... ....+..+.++|++ +++++ |+. .+.-.
T Consensus 90 ~~i~~~d~~~g~-~~~~~~~~~~~~~~~~~~i~~d~~G--------------~l~vtd~~~g~~~~~~~~~~~~~~~~~~ 154 (296)
T 3e5z_A 90 RRLERQREPGGE-WESIADSFEGKKLNSPNDVCLAPDG--------------SLWFSDPTYGIDKPEEGYGGEMELPGRW 154 (296)
T ss_dssp TEEEEECSTTCC-EEEEECEETTEECCCCCCEEECTTS--------------CEEEEECSHHHHCGGGSSCCCCCSSSCE
T ss_pred CeEEEEcCCCCc-EEEEeeccCCCCCCCCCCEEECCCC--------------CEEEECCccccccccccccccccCCCcE
Confidence 899999986543 22111 1111 11245678888876 55555 221 01224
Q ss_pred EEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCc-ccceEeeccccCeEEEEee
Q 036510 189 VWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQ-WEGKVLHDFKTPVYRVSWS 267 (288)
Q Consensus 189 iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~-~~~~~~~~~~~~i~~~~~s 267 (288)
||.+.... . ...+..+....+.++|+|++ +++++.+.++.|.+|++...... .....+......+..++++
T Consensus 155 l~~~~~~g-~---~~~~~~~~~~~~gi~~s~dg----~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d 226 (296)
T 3e5z_A 155 VFRLAPDG-T---LSAPIRDRVKPNGLAFLPSG----NLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVD 226 (296)
T ss_dssp EEEECTTS-C---EEEEECCCSSEEEEEECTTS----CEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEB
T ss_pred EEEECCCC-C---EEEeecCCCCCccEEECCCC----CEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEEC
Confidence 55554321 1 11223445567899999984 55688888999999998632211 1112221223456789999
Q ss_pred cCCCEEEEEeCCCcEEEeEc
Q 036510 268 LTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 268 pdg~~l~s~~~d~~v~~w~~ 287 (288)
++|+++++. ++.|.+|+.
T Consensus 227 ~~G~l~v~~--~~~v~~~~~ 244 (296)
T 3e5z_A 227 AGGLIWASA--GDGVHVLTP 244 (296)
T ss_dssp TTSCEEEEE--TTEEEEECT
T ss_pred CCCCEEEEc--CCeEEEECC
Confidence 999976655 788999973
No 193
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.35 E-value=8.5e-09 Score=85.90 Aligned_cols=238 Identities=9% Similarity=-0.004 Sum_probs=151.1
Q ss_pred cccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCC
Q 036510 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNS 89 (288)
Q Consensus 10 h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~ 89 (288)
+...+.++.++++|+++++...++.|..|+.+. ... ...+......+..+++.+ ++.++++...++.|..|+. ++
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~-~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~d~-~g 129 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKKG-IIK-EYTLPNPDSAPYGITEGP--NGDIWFTEMNGNRIGRITD-DG 129 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEE-EEECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECT-TC
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCCC-cEE-EEeCCCcCCCceeeEECC--CCCEEEEecCCceEEEECC-CC
Confidence 346688899999999888877788888888642 211 122223455688999875 3788888777899999987 43
Q ss_pred CceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecc
Q 036510 90 NEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 169 (288)
Q Consensus 90 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~ 169 (288)
. . .......+...+.++.+.|+ +.+.++...++.|..||. ++ ..... ........+..+.+++++
T Consensus 130 ~-~-~~~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~-~g-~~~~~-~~~~~~~~~~~i~~~~~g-------- 194 (299)
T 2z2n_A 130 K-I-REYELPNKGSYPSFITLGSD--NALWFTENQNNAIGRITE-SG-DITEF-KIPTPASGPVGITKGNDD-------- 194 (299)
T ss_dssp C-E-EEEECSSTTCCEEEEEECTT--SCEEEEETTTTEEEEECT-TC-CEEEE-ECSSTTCCEEEEEECTTS--------
T ss_pred C-E-EEecCCCCCCCCceEEEcCC--CCEEEEeCCCCEEEEEcC-CC-cEEEe-eCCCCCCcceeEEECCCC--------
Confidence 3 1 11222334456889999887 566666666788999987 33 22221 112233456778888775
Q ss_pred cccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcc
Q 036510 170 GFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQW 249 (288)
Q Consensus 170 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~ 249 (288)
++.++...++.|.+||. ++.. ... .+..+...+.++.+.|++ .+.++...++.|..|+.. . ..
T Consensus 195 ------~l~v~~~~~~~i~~~~~-~g~~--~~~-~~~~~~~~~~~i~~~~~g----~l~v~~~~~~~i~~~d~~-g--~~ 257 (299)
T 2z2n_A 195 ------ALWFVEIIGNKIGRITT-SGEI--TEF-KIPTPNARPHAITAGAGI----DLWFTEWGANKIGRLTSN-N--II 257 (299)
T ss_dssp ------SEEEEETTTTEEEEECT-TCCE--EEE-ECSSTTCCEEEEEECSTT----CEEEEETTTTEEEEEETT-T--EE
T ss_pred ------CEEEEccCCceEEEECC-CCcE--EEE-ECCCCCCCceeEEECCCC----CEEEeccCCceEEEECCC-C--ce
Confidence 55555556788999987 5431 111 223344568899999874 566666678899999873 1 11
Q ss_pred cceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 250 EGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 250 ~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
...........+.++++ ++|+++++.. .+.|..++
T Consensus 258 ~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~ 292 (299)
T 2z2n_A 258 EEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLT 292 (299)
T ss_dssp EEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEE
T ss_pred EEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEE
Confidence 11111222356889999 9998877665 45554544
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.34 E-value=8.8e-10 Score=94.28 Aligned_cols=234 Identities=10% Similarity=0.050 Sum_probs=141.7
Q ss_pred ceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCce
Q 036510 13 TVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEW 92 (288)
Q Consensus 13 ~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~ 92 (288)
...++.+. +++++++...+++|.++|... .+.+.++.. ......++++++ +.++++...++.|.+||..+..
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t--~~~~~~i~~-~~~p~~i~~~~~--g~lyv~~~~~~~v~~iD~~t~~-- 116 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINT--FKEVGRITG-FTSPRYIHFLSD--EKAYVTQIWDYRIFIINPKTYE-- 116 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTT--CCEEEEEEC-CSSEEEEEEEET--TEEEEEEBSCSEEEEEETTTTE--
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcc--cEEEEEcCC-CCCCcEEEEeCC--CeEEEEECCCCeEEEEECCCCe--
Confidence 45667664 456667777789999999853 455666643 456788998654 6666666689999999987653
Q ss_pred EEeEEeecCC-----CceeEEEeccCCCCeEEEEEe-CCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCce
Q 036510 93 IKDHVFEDHK-----SSVNSIDWAPHELGLCLACGS-SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL 166 (288)
Q Consensus 93 ~~~~~~~~h~-----~~v~~l~~~p~~~~~~l~sg~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~ 166 (288)
....+.... .....+.+ .. +.++++.. .++.|.++|+.++.... .. .. ......+.++|++
T Consensus 117 -~~~~i~~g~~~~~~~~p~~i~~-~~--~~lyv~~~~~~~~v~viD~~t~~~~~--~i-~~-g~~p~~i~~~~dG----- 183 (328)
T 3dsm_A 117 -ITGYIECPDMDMESGSTEQMVQ-YG--KYVYVNCWSYQNRILKIDTETDKVVD--EL-TI-GIQPTSLVMDKYN----- 183 (328)
T ss_dssp -EEEEEECTTCCTTTCBCCCEEE-ET--TEEEEEECTTCCEEEEEETTTTEEEE--EE-EC-SSCBCCCEECTTS-----
T ss_pred -EEEEEEcCCccccCCCcceEEE-EC--CEEEEEcCCCCCEEEEEECCCCeEEE--EE-Ec-CCCccceEEcCCC-----
Confidence 222333222 14456666 22 55555554 48899999987653211 11 11 1223456666665
Q ss_pred ecccccCCCceeEEeecC----------CcEEEEEEeCCceeeeeeeccccC-CcceEEEEecCCCCCCCcEEEEEeCCC
Q 036510 167 VGSGFLDPVQKLCSGGCD----------NTVKVWKLYNGIWKMDCFPALQMH-TDWVRDVAWAPNLGLPKSTIASASEDG 235 (288)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d----------~~i~iwd~~~~~~~~~~~~~~~~h-~~~V~~v~~sp~~~~~~~~l~s~s~D~ 235 (288)
++++++..+ +.|.++|..++. ....+... ......++|+|+. ++|..+..
T Consensus 184 ---------~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~----v~~~~~~~~g~~p~~la~~~d~----~~lyv~~~-- 244 (328)
T 3dsm_A 184 ---------KMWTITDGGYEGSPYGYEAPSLYRIDAETFT----VEKQFKFKLGDWPSEVQLNGTR----DTLYWINN-- 244 (328)
T ss_dssp ---------EEEEEBCCBCTTCSSCBCCCEEEEEETTTTE----EEEEEECCTTCCCEEEEECTTS----CEEEEESS--
T ss_pred ---------CEEEEECCCccCCccccCCceEEEEECCCCe----EEEEEecCCCCCceeEEEecCC----CEEEEEcc--
Confidence 555555444 789999987653 22222211 1246899999974 44544444
Q ss_pred cEEEEEeecCCCcccceEeeccccCeEEEEeecC-CCEEEEE----eCCCcEEEeEc
Q 036510 236 KVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLT-GNILAVA----DGNNNVTLWEE 287 (288)
Q Consensus 236 ~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spd-g~~l~s~----~~d~~v~~w~~ 287 (288)
.|.+||+...... ....+.........++++|+ |+.+++. ..+++|.+||.
T Consensus 245 ~v~~~d~~t~~~~-~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 245 DIWRMPVEADRVP-VRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp SEEEEETTCSSCC-SSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred EEEEEECCCCcee-eeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 8889987643211 00111111356889999995 5555554 46889999984
No 195
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.33 E-value=4.7e-10 Score=97.38 Aligned_cols=225 Identities=12% Similarity=0.051 Sum_probs=134.1
Q ss_pred ceEEEEEcCCCCEEEEeeC--CCcEEEEEeCCCCceeeEE-EeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCC
Q 036510 13 TVHDVAMDYYGKRLATASS--DYSIKIIGVGNNTSQHLAK-LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNS 89 (288)
Q Consensus 13 ~v~~~~~s~~g~~l~s~~~--d~~i~lwd~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~ 89 (288)
....+.|+|||++|++++. +++|.+||+... +.+.. +. + ...+.+.+.++ ....+++.+.||++.+|+....
T Consensus 109 ~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~--~~~~~~i~-~-~~~~~v~~~p~-~~~~~~~~~~dg~~~~v~~~~~ 183 (361)
T 2oiz_A 109 YDGLFRQTTDGKFIVLQNASPATSIGIVDVAKG--DYVEDVTA-A-AGCWSVIPQPN-RPRSFMTICGDGGLLTINLGED 183 (361)
T ss_dssp CGGGEEECTTSSEEEEEEESSSEEEEEEETTTT--EEEEEEGG-G-TTEEEEEECTT-SSSEEEEEETTSSEEEEEECTT
T ss_pred CcceEEECCCCCEEEEECCCCCCeEEEEECCCC--cEEEEEec-C-CCcceeEEcCC-CCeeEEEECCCCcEEEEEECCC
Confidence 3456889999999998874 589999998643 55555 33 2 12233455443 2478889999999999988653
Q ss_pred CceE-EeE---EeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEee---c---c----CCCCeeEE
Q 036510 90 NEWI-KDH---VFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRID---Q---A----HPVGVTSV 155 (288)
Q Consensus 90 ~~~~-~~~---~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~---~---~----~~~~v~~i 155 (288)
.... ... .+..+..++ .+.+.|+ +..++..+.++.+.++|+..+... ..... . . .+....-+
T Consensus 184 g~~~~~~~~~~~~~~~~~~~-~~~~~~~--g~~~~~~~~~~~v~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~p~g~~~~ 259 (361)
T 2oiz_A 184 GKVASQSRSKQMFSVKDDPI-FIAPALD--KDKAHFVSYYGNVYSADFSGDEVK-VDGPWSLLNDEDKAKNWVPGGYNLV 259 (361)
T ss_dssp SSEEEEEECCCCSCTTTSCB-CSCCEEC--SSEEEEEBTTSEEEEEECSSSSCE-EEEEEESCCHHHHHTTCEECCSSCE
T ss_pred CcEeeeccccceEcCCCCce-EEEeccc--CCEEEEEeCCCeEEEEEecCCCce-ecccccccCccccccccccCCeeEE
Confidence 3221 110 111122222 2223454 333455567889999998644221 11110 0 0 01111125
Q ss_pred EeCCCCCCCceecccccCCCceeEEee----------cCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCC
Q 036510 156 SWAPSTAPGALVGSGFLDPVQKLCSGG----------CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPK 225 (288)
Q Consensus 156 ~~~p~~~~~~~~~~~~~~~~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~ 225 (288)
.++|++. .++++.+ ..+.|.+||+.++ +.+..+..+. +.++.|+|++
T Consensus 260 a~~~dg~-------------~lyv~~~~~~~~~~~~~~~~~v~viD~~t~----~~v~~i~~~~--p~~ia~spdg---- 316 (361)
T 2oiz_A 260 GLHRASG-------------RMYVFMHPDGKEGTHKFPAAEIWVMDTKTK----QRVARIPGRD--ALSMTIDQQR---- 316 (361)
T ss_dssp EEETTTT-------------EEEEEEESSCCTTCTTCCCSEEEEEETTTT----EEEEEEECTT--CCEEEEETTT----
T ss_pred EEecCCC-------------eEEEEEccCCCcccccCCCceEEEEECCCC----cEEEEEecCC--eeEEEECCCC----
Confidence 5666652 3333333 1347999998776 4455666665 7999999984
Q ss_pred cEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCC
Q 036510 226 STIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGN 271 (288)
Q Consensus 226 ~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~ 271 (288)
++|.+++. ++|.+||...... .....+...+.....++++|||+
T Consensus 317 ~~l~v~n~-~~v~v~D~~t~~l-~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 317 NLMLTLDG-GNVNVYDISQPEP-KLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TEEEEECS-SCEEEEECSSSSC-EEEEEETTSCSSEEEEEECCCSC
T ss_pred CEEEEeCC-CeEEEEECCCCcc-eeeEEeccCCCCcEEEEecCCCC
Confidence 57777776 9999999875310 11223334566788999999986
No 196
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.31 E-value=1.5e-08 Score=84.38 Aligned_cols=240 Identities=9% Similarity=-0.022 Sum_probs=153.9
Q ss_pred cccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCC
Q 036510 10 HEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNS 89 (288)
Q Consensus 10 h~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~ 89 (288)
....+.++.++++|+++++...++.|..++.. ..... ..+..+...+.++++.+ ++.++++...++.|..+|.. +
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSS--LGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECTT-S
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECC--CCCEEEEecCCCeEEEECCC-C
Confidence 34577899999999988887788999999875 32221 22333446788999874 37788877778899999876 3
Q ss_pred CceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecc
Q 036510 90 NEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 169 (288)
Q Consensus 90 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~ 169 (288)
. . ....+......+.++.+.++ +.++++...++.|..++.. + ...... .......+..+.+.|++
T Consensus 93 ~-~-~~~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~~-g-~~~~~~-~~~~~~~~~~i~~d~~g-------- 157 (300)
T 2qc5_A 93 G-F-TEYPLPQPDSGPYGITEGLN--GDIWFTQLNGDRIGKLTAD-G-TIYEYD-LPNKGSYPAFITLGSDN-------- 157 (300)
T ss_dssp C-E-EEEECSSTTCCEEEEEECST--TCEEEEETTTTEEEEECTT-S-CEEEEE-CSSTTCCEEEEEECTTS--------
T ss_pred C-e-EEecCCCCCCCCccceECCC--CCEEEEccCCCeEEEECCC-C-CEEEcc-CCCCCCCceeEEECCCC--------
Confidence 3 2 11222323456889998876 5666666667788888865 2 222111 12223457788888775
Q ss_pred cccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcc
Q 036510 170 GFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQW 249 (288)
Q Consensus 170 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~ 249 (288)
++.++...++.|..+|. ++... .. .+..+...+..+.+.+++ .+.++....+.|.+|+.. . ..
T Consensus 158 ------~l~v~~~~~~~i~~~~~-~g~~~--~~-~~~~~~~~~~~i~~d~~g----~l~v~~~~~~~i~~~~~~-g-~~- 220 (300)
T 2qc5_A 158 ------ALWFTENQNNSIGRITN-TGKLE--EY-PLPTNAAAPVGITSGNDG----ALWFVEIMGNKIGRITTT-G-EI- 220 (300)
T ss_dssp ------SEEEEETTTTEEEEECT-TCCEE--EE-ECSSTTCCEEEEEECTTS----SEEEEETTTTEEEEECTT-C-CE-
T ss_pred ------CEEEEecCCCeEEEECC-CCcEE--Ee-eCCCCCCCcceEEECCCC----CEEEEccCCCEEEEEcCC-C-cE-
Confidence 55555555678888887 43211 11 122334467899998863 566666667789999862 1 11
Q ss_pred cceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 250 EGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 250 ~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
...........+.++++.++|+++++...++.|..|+
T Consensus 221 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 221 SEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEC
T ss_pred EEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEEC
Confidence 1111112235688999999999777665678888876
No 197
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.31 E-value=3.6e-09 Score=93.33 Aligned_cols=241 Identities=9% Similarity=-0.023 Sum_probs=149.8
Q ss_pred cceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCC--cEEEeecCCC
Q 036510 12 DTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDG--TVIIWKEGNS 89 (288)
Q Consensus 12 ~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~--~v~iwd~~~~ 89 (288)
.....++|+++|+++++...++.|+.||.+.. ........ ..... ++|+++ ++.|+.+..++ .|.+++....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g--~~~~~~~~-~~~~~-ia~~~~--g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDN--KVTTVHPG-FKGGK-PAVTKD--KQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTT--EEEEEEET-CCBCB-CEECTT--SSEEEEEBSSTTCEEEEEEGGGT
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCC--EEEEeecc-CCCCc-eeEecC--CCcEEEEecCCCceEEEEEcCCC
Confidence 35678999999998888888899999998543 22222232 22233 888754 77777777765 7888877544
Q ss_pred CceEEeEEeec-CCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEe--eccCCCCe--eEEEeCCCCCCC
Q 036510 90 NEWIKDHVFED-HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRI--DQAHPVGV--TSVSWAPSTAPG 164 (288)
Q Consensus 90 ~~~~~~~~~~~-h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~--~~~~~~~v--~~i~~~p~~~~~ 164 (288)
........+.. ....+.+++++|++ +.+++ +..++.|+.||..... ...... ..++...- ..+.|+|++
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~-g~lyv-~d~~~~I~~~d~~~~~-~~~~~~~~~~g~~~~~P~~~ia~~p~~--- 278 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETE-EWLYF-VDSNKNFGRFNVKTQE-VTLIKQLELSGSLGTNPGPYLIYYFVD--- 278 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTS-SEEEE-ECTTCEEEEEETTTCC-EEEEEECCCCSCCCCSSCCEEEEETTT---
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCC-CeEEE-EECCCcEEEEECCCCC-EEEEecccccCCCCCCccccEEEeCCC---
Confidence 32111111112 34567889999953 55444 6667889999986542 211110 11111111 278888854
Q ss_pred ceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccC---------------CcceEEEEecCCCCCCCcEEE
Q 036510 165 ALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMH---------------TDWVRDVAWAPNLGLPKSTIA 229 (288)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h---------------~~~V~~v~~sp~~~~~~~~l~ 229 (288)
+.++++-..++.|..||..... . .+.++ -.....++++|++ .+++
T Consensus 279 ----------g~lyv~d~~~~~I~~~~~~g~~---~---~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG----~lyv 338 (409)
T 3hrp_A 279 ----------SNFYMSDQNLSSVYKITPDGEC---E---WFCGSATQKTVQDGLREEALFAQPNGMTVDEDG----NFYI 338 (409)
T ss_dssp ----------TEEEEEETTTTEEEEECTTCCE---E---EEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC----CEEE
T ss_pred ----------CEEEEEeCCCCEEEEEecCCCE---E---EEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC----CEEE
Confidence 1566677777888888754321 1 11111 1346889999974 5777
Q ss_pred EEe-CCCcEEEEEeecCCCcccceEeecc---------------ccCeEEEEeecCCCEEEEEeCCCcEEEeEcC
Q 036510 230 SAS-EDGKVIIWTVAREGDQWEGKVLHDF---------------KTPVYRVSWSLTGNILAVADGNNNVTLWEEA 288 (288)
Q Consensus 230 s~s-~D~~i~iw~~~~~~~~~~~~~~~~~---------------~~~i~~~~~spdg~~l~s~~~d~~v~~w~~~ 288 (288)
+-+ .++.|+.|++... ....+.+. -.....++++|+|.++++-..++.|+.++++
T Consensus 339 ad~~~~~~I~~~~~~~G----~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 339 VDGFKGYCLRKLDILDG----YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EETTTTCEEEEEETTTT----EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred EeCCCCCEEEEEECCCC----EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 877 8889999985322 11222221 1357899999998888887888899988754
No 198
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.27 E-value=2.1e-08 Score=84.32 Aligned_cols=240 Identities=8% Similarity=-0.008 Sum_probs=142.6
Q ss_pred ccccccccceEEEEEcCC-CCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEE
Q 036510 5 KIETGHEDTVHDVAMDYY-GKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83 (288)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~-g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~i 83 (288)
.+...+..--.+..|+++ +.++++...++.|..||..... ...+ .+...+.+++++++ ++++++. +..|.+
T Consensus 6 ~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~---~~~~-~~~~~~~~i~~~~d--G~l~v~~--~~~l~~ 77 (297)
T 3g4e_A 6 CVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ---VQRV-TMDAPVSSVALRQS--GGYVATI--GTKFCA 77 (297)
T ss_dssp EEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCC---EEEE-ECSSCEEEEEEBTT--SSEEEEE--TTEEEE
T ss_pred EEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCc---EEEE-eCCCceEEEEECCC--CCEEEEE--CCeEEE
Confidence 333334444557788885 5667777778999999975432 2222 23467899999764 6755553 578999
Q ss_pred eecCCCCceEEeEEeec--CCCceeEEEeccCCCCeEEEEE-eC--------CCcEEEEeecCCCCeeeEEeeccCCCCe
Q 036510 84 WKEGNSNEWIKDHVFED--HKSSVNSIDWAPHELGLCLACG-SS--------DGNISVFTARADGGWDTSRIDQAHPVGV 152 (288)
Q Consensus 84 wd~~~~~~~~~~~~~~~--h~~~v~~l~~~p~~~~~~l~sg-~~--------d~~i~i~d~~~~~~~~~~~~~~~~~~~v 152 (288)
||..++. ......... ....++.+.+.|+ +.++++. .. .....+|.+...+.... .. ......
T Consensus 78 ~d~~~g~-~~~~~~~~~~~~~~~~~di~~d~d--G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~--~~-~~~~~p 151 (297)
T 3g4e_A 78 LNWKEQS-AVVLATVDNDKKNNRFNDGKVDPA--GRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK--YF-DQVDIS 151 (297)
T ss_dssp EETTTTE-EEEEEECCTTCSSEEEEEEEECTT--SCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE--EE-EEESBE
T ss_pred EECCCCc-EEEEEecCCCCCCCCCCCEEECCC--CCEEEecCCcccccccccCCCcEEEEEECCCCEEE--Ee-eccccc
Confidence 9986543 211111111 1234788999987 4544433 22 13345666654333221 11 112235
Q ss_pred eEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEe--CCce-eeeeeeccccCCcceEEEEecCCCCCCCcEEE
Q 036510 153 TSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLY--NGIW-KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIA 229 (288)
Q Consensus 153 ~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~ 229 (288)
..+.|+|++. .++++.+.++.|.+||+. ++.. ..+....+..+......+.+.+++ .+.+
T Consensus 152 ngi~~spdg~-------------~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G----~lwv 214 (297)
T 3g4e_A 152 NGLDWSLDHK-------------IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG----KLWV 214 (297)
T ss_dssp EEEEECTTSC-------------EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS----CEEE
T ss_pred cceEEcCCCC-------------EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC----CEEE
Confidence 6789999872 345667778899999984 3321 112222333344557888998873 5677
Q ss_pred EEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEee-cCCCEEEEEeC
Q 036510 230 SASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWS-LTGNILAVADG 278 (288)
Q Consensus 230 s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~s-pdg~~l~s~~~ 278 (288)
+...++.|..||....+ ....+......+++++|. ||++.|.+++.
T Consensus 215 a~~~~~~v~~~d~~tG~---~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 215 ACYNGGRVIRLDPVTGK---RLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEETTTEEEEECTTTCC---EEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEcCCCEEEEEcCCCce---EEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 77778889999875321 112333334578999999 99988776654
No 199
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.26 E-value=4.4e-10 Score=105.83 Aligned_cols=247 Identities=12% Similarity=0.021 Sum_probs=140.0
Q ss_pred ccccccccceEEEEEcCCCCEEE-----EeeCCCcEEEEEeCCCCceeeE-EEeccccCeEEEEecCCCCCCEEEEeeCC
Q 036510 5 KIETGHEDTVHDVAMDYYGKRLA-----TASSDYSIKIIGVGNNTSQHLA-KLSGHKGAVWEVAWAHPKFGSILASCSFD 78 (288)
Q Consensus 5 ~~~~~h~~~v~~~~~s~~g~~l~-----s~~~d~~i~lwd~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~l~s~s~d 78 (288)
.+..+|...+.+++|||||++|| +|+.+.+|+++|+..+. .+. .+.+. ....++|+ + ++.|+.++.+
T Consensus 122 ~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~--~~~~~~~~~--k~~~~~Ws-D--g~~l~y~~~~ 194 (693)
T 3iuj_A 122 TLSPDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ--PLETPLKDV--KFSGISWL-G--NEGFFYSSYD 194 (693)
T ss_dssp GGSTTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS--EEEEEEEEE--ESCCCEEE-T--TTEEEEEESS
T ss_pred hccCCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC--CCccccCCc--eeccEEEe-C--CCEEEEEEec
Confidence 34456777888999999999887 34444679999986543 222 22211 12467898 6 7888888877
Q ss_pred Cc-------------EEEeecCCCCce-EEeEEeec-CCCceeEEEeccCCCCeEEEEEe---CCCcEEEEeecCCC-Ce
Q 036510 79 GT-------------VIIWKEGNSNEW-IKDHVFED-HKSSVNSIDWAPHELGLCLACGS---SDGNISVFTARADG-GW 139 (288)
Q Consensus 79 ~~-------------v~iwd~~~~~~~-~~~~~~~~-h~~~v~~l~~~p~~~~~~l~sg~---~d~~i~i~d~~~~~-~~ 139 (288)
.. |++|++.+.... .++..... |...+..+.|+|++. .++++.. ..+.|+++|+..+. .+
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~~~~~~~~ 273 (693)
T 3iuj_A 195 KPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDR-FLLISAANSTSGNRLYVKDLSQENAPL 273 (693)
T ss_dssp CCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSC-EEEEEEESSSSCCEEEEEETTSTTCCC
T ss_pred CcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCC-EEEEEEccCCCCcEEEEEECCCCCCce
Confidence 43 899988654321 12211122 334577899999842 3333333 23588899886543 22
Q ss_pred eeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecC---CcEEEEEEeCCceeeeeeeccccCCcceEEEE
Q 036510 140 DTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD---NTVKVWKLYNGIWKMDCFPALQMHTDWVRDVA 216 (288)
Q Consensus 140 ~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~ 216 (288)
. ....+....... |++++. .+++....+ ..|..+|+.++.. .....+..|...+. .
T Consensus 274 ~---~l~~~~~~~~~~-~~~~g~-------------~l~~~t~~~~~~~~l~~~d~~~~~~--~~~~~l~~~~~~~~--~ 332 (693)
T 3iuj_A 274 L---TVQGDLDADVSL-VDNKGS-------------TLYLLTNRDAPNRRLVTVDAANPGP--AHWRDLIPERQQVL--T 332 (693)
T ss_dssp E---EEECSSSSCEEE-EEEETT-------------EEEEEECTTCTTCEEEEEETTSCCG--GGCEEEECCCSSCE--E
T ss_pred E---EEeCCCCceEEE-EeccCC-------------EEEEEECCCCCCCEEEEEeCCCCCc--cccEEEecCCCCEE--E
Confidence 2 222333333333 455441 344444333 4577777765421 01123444555554 7
Q ss_pred ecCCCCCCCcEEEEEe-CCC--cEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCC----CcEEEeEc
Q 036510 217 WAPNLGLPKSTIASAS-EDG--KVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGN----NNVTLWEE 287 (288)
Q Consensus 217 ~sp~~~~~~~~l~s~s-~D~--~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d----~~v~~w~~ 287 (288)
|+|++ ++|+... .|+ .|++|++... . ...+.......+..+.++|+++.|+....+ ++|..||+
T Consensus 333 ~s~~g----~~lv~~~~~~g~~~l~~~d~~g~--~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 333 VHSGS----GYLFAEYMVDATARVEQFDYEGK--R-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp EEEET----TEEEEEEEETTEEEEEEECTTSC--E-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred EEEEC----CEEEEEEEECCeeEEEEEECCCC--e-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 88874 4555554 455 5777776421 1 111212223457778889999877666444 67888774
No 200
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.25 E-value=1.6e-10 Score=100.82 Aligned_cols=175 Identities=9% Similarity=-0.035 Sum_probs=119.7
Q ss_pred CeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCC--------ceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcE
Q 036510 57 AVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN--------EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNI 128 (288)
Q Consensus 57 ~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~--------~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i 128 (288)
.++.+++++. ..+|++|+.+ .+++|+..+.. ........ .+.. |+.|+| + +.+|+++ .++.|
T Consensus 39 ~~nlLais~~--~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d--~~~L~v~-~~~~l 108 (388)
T 1xip_A 39 SLQNLDISNS--KSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--H--GDQVLVS-TRNAL 108 (388)
T ss_dssp CCBCEEEETT--TTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--E--TTEEEEE-ESSEE
T ss_pred cccEEEEcCC--CCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--C--CCEEEEE-cCCcE
Confidence 5788888864 6788888887 55569853211 01111223 3556 999999 4 4567777 78999
Q ss_pred EEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccC
Q 036510 129 SVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMH 208 (288)
Q Consensus 129 ~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h 208 (288)
++||++...... ....|...+.++.+.+. + ++.++.||.+.+||+.++.. .. +
T Consensus 109 ~v~dv~sl~~~~---~~~~~~~~v~~i~~~~p---------------~-~av~~~dG~L~v~dl~~~~~----~~----~ 161 (388)
T 1xip_A 109 YSLDLEELSEFR---TVTSFEKPVFQLKNVNN---------------T-LVILNSVNDLSALDLRTKST----KQ----L 161 (388)
T ss_dssp EEEESSSTTCEE---EEEECSSCEEEEEECSS---------------E-EEEEETTSEEEEEETTTCCE----EE----E
T ss_pred EEEEchhhhccC---ccceeecceeeEEecCC---------------C-EEEEECCCCEEEEEccCCcc----cc----c
Confidence 999998654322 23356667777776543 2 77889999999999986531 11 3
Q ss_pred CcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEe------e---ccccCeEEEEeecCCCEEEE
Q 036510 209 TDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVL------H---DFKTPVYRVSWSLTGNILAV 275 (288)
Q Consensus 209 ~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~------~---~~~~~i~~~~~spdg~~l~s 275 (288)
...|.|++|||.+ ++.|..|+++++|++..... ..+..+ . ++...|.++.|.++++++++
T Consensus 162 ~~~Vs~v~WSpkG------~~vg~~dg~i~~~~~~~~~~-~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 162 AQNVTSFDVTNSQ------LAVLLKDRSFQSFAWRNGEM-EKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EESEEEEEECSSE------EEEEETTSCEEEEEEETTEE-EEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cCCceEEEEcCCc------eEEEEcCCcEEEEcCCCccc-cccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 4579999999962 78899999999998864310 002222 2 24567999999999999886
No 201
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.22 E-value=1.3e-08 Score=93.27 Aligned_cols=236 Identities=12% Similarity=0.012 Sum_probs=144.6
Q ss_pred cCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecC--CCCceEEeEE
Q 036510 20 DYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEG--NSNEWIKDHV 97 (288)
Q Consensus 20 s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~--~~~~~~~~~~ 97 (288)
++.+.++++...+++|.++|... .+.+.++... ..+..+.++++ ++++..++.|+.|.+||+. +.. ....
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t--~~v~~~i~~g-~~p~~v~~SpD--Gr~lyv~~~dg~V~viD~~~~t~~---~v~~ 235 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGST--YEIKTVLDTG-YAVHISRLSAS--GRYLFVIGRDGKVNMIDLWMKEPT---TVAE 235 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTT--CCEEEEEECS-SCEEEEEECTT--SCEEEEEETTSEEEEEETTSSSCC---EEEE
T ss_pred CCCceEEEEeCCCCeEEEEECCC--CeEEEEEeCC-CCccceEECCC--CCEEEEEcCCCeEEEEECCCCCCc---EeEE
Confidence 34456778888899999999854 3556666533 34678999875 8899989999999999985 333 2334
Q ss_pred eecCCCceeEEEec----cCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeec-------cCCC-CeeEEEeCCCCCCCc
Q 036510 98 FEDHKSSVNSIDWA----PHELGLCLACGSSDGNISVFTARADGGWDTSRIDQ-------AHPV-GVTSVSWAPSTAPGA 165 (288)
Q Consensus 98 ~~~h~~~v~~l~~~----p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~-------~~~~-~v~~i~~~p~~~~~~ 165 (288)
+.... ....++|+ |++ ..++++...++++.++|..+........... .|+. .+..+..+++.+
T Consensus 236 i~~G~-~P~~ia~s~~~~pDG-k~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~--- 310 (567)
T 1qks_A 236 IKIGS-EARSIETSKMEGWED-KYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRP--- 310 (567)
T ss_dssp EECCS-EEEEEEECCSTTCTT-TEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSS---
T ss_pred EecCC-CCceeEEccccCCCC-CEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCC---
Confidence 44322 35789999 573 3455566777999999976643322211111 1222 566777777652
Q ss_pred eecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecC
Q 036510 166 LVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245 (288)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~ 245 (288)
.++++...++.|.++|...... ++ +..+ .......++.|+|++ ..++++...+++|.++|+...
T Consensus 311 ----------~~vv~~~~~g~v~~vd~~~~~~-~~-v~~i-~~~~~~~d~~~~pdg---r~~~va~~~sn~V~ViD~~t~ 374 (567)
T 1qks_A 311 ----------EFIVNVKETGKILLVDYTDLNN-LK-TTEI-SAERFLHDGGLDGSH---RYFITAANARNKLVVIDTKEG 374 (567)
T ss_dssp ----------EEEEEETTTTEEEEEETTCSSE-EE-EEEE-ECCSSEEEEEECTTS---CEEEEEEGGGTEEEEEETTTT
T ss_pred ----------EEEEEecCCCeEEEEecCCCcc-ce-eeee-eccccccCceECCCC---CEEEEEeCCCCeEEEEECCCC
Confidence 4566667788899998754321 11 1111 123346788999985 224455556889999998753
Q ss_pred CCcccceEeec-ccc--CeEEEE-eecCCCEEE-EEe-CCCcEEEeEc
Q 036510 246 GDQWEGKVLHD-FKT--PVYRVS-WSLTGNILA-VAD-GNNNVTLWEE 287 (288)
Q Consensus 246 ~~~~~~~~~~~-~~~--~i~~~~-~spdg~~l~-s~~-~d~~v~~w~~ 287 (288)
+. ...+.. ... +-..+. ++|++..+. ++. .+++|.|+|.
T Consensus 375 kl---~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~ 419 (567)
T 1qks_A 375 KL---VAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGT 419 (567)
T ss_dssp EE---EEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEEC
T ss_pred cE---EEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecC
Confidence 21 111111 111 111223 589855544 443 4689999985
No 202
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.20 E-value=2.9e-09 Score=87.77 Aligned_cols=197 Identities=10% Similarity=0.019 Sum_probs=130.4
Q ss_pred cceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEe-ccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCC
Q 036510 12 DTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN 90 (288)
Q Consensus 12 ~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~ 90 (288)
..+.+++++++|+++++.. ++.|..|+.+... ...+. .....+.++++.++ +.++++...++.|.+|+.....
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~---~~~~~~~~~~~p~~i~~~~~--g~l~v~~~~~~~i~~~~~~~~~ 140 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN---QTVLPFDGLNYPEGLAVDTQ--GAVYVADRGNNRVVKLAAGSKT 140 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSC---CEECCCCSCSSEEEEEECTT--CCEEEEEGGGTEEEEECTTCCS
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCce---EeeeecCCcCCCcceEECCC--CCEEEEECCCCEEEEEECCCce
Confidence 4567899999999777666 8889999875432 22222 22356789999753 7888888888999999754432
Q ss_pred ceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceeccc
Q 036510 91 EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSG 170 (288)
Q Consensus 91 ~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~ 170 (288)
. ..........+.+++++|+ +.++++...++.|.+|+...... ......+...+..+.++|++
T Consensus 141 ~---~~~~~~~~~~p~~i~~~~~--g~l~v~~~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~i~~d~~g--------- 203 (270)
T 1rwi_B 141 Q---TVLPFTGLNDPDGVAVDNS--GNVYVTDTDNNRVVKLEAESNNQ---VVLPFTDITAPWGIAVDEAG--------- 203 (270)
T ss_dssp C---EECCCCSCCSCCCEEECTT--CCEEEEEGGGTEEEEECTTTCCE---EECCCSSCCSEEEEEECTTC---------
T ss_pred e---EeeccccCCCceeEEEeCC--CCEEEEECCCCEEEEEecCCCce---EeecccCCCCceEEEECCCC---------
Confidence 1 1111122345788999987 45666666678999998764321 11111222457788888875
Q ss_pred ccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeec
Q 036510 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAR 244 (288)
Q Consensus 171 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~ 244 (288)
.++++...++.|.+||...... ......+...+.++.++|++ .++++...++.|+++++..
T Consensus 204 -----~l~v~~~~~~~v~~~~~~~~~~----~~~~~~~~~~p~~i~~~~~g----~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 204 -----TVYVTEHNTNQVVKLLAGSTTS----TVLPFTGLNTPLAVAVDSDR----TVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp -----CEEEEETTTSCEEEECTTCSCC----EECCCCSCSCEEEEEECTTC----CEEEEEGGGTEEEEECCCG
T ss_pred -----CEEEEECCCCcEEEEcCCCCcc----eeeccCCCCCceeEEECCCC----CEEEEECCCCEEEEEcCCC
Confidence 5666666788899998754321 11112233567899999974 6788888999999998764
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.19 E-value=5.7e-09 Score=98.93 Aligned_cols=235 Identities=13% Similarity=0.040 Sum_probs=133.5
Q ss_pred cCCCCEEEEeeCCCc---EEEEEeC-----CCCceeeEE----EeccccCeEEEEecCCCCCCEEEEeeCC-----CcEE
Q 036510 20 DYYGKRLATASSDYS---IKIIGVG-----NNTSQHLAK----LSGHKGAVWEVAWAHPKFGSILASCSFD-----GTVI 82 (288)
Q Consensus 20 s~~g~~l~s~~~d~~---i~lwd~~-----~~~~~~~~~----~~~h~~~v~~~~~~~~~~~~~l~s~s~d-----~~v~ 82 (288)
+|+|++++-...++. ..||-.+ ++..+.+.. ..+|...+..++|||+ |++|+.++.+ .+|+
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPD--G~~la~~~~~~G~e~~~i~ 192 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDD--GRLLAYSVQDGGSDWRTVK 192 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTT--SSEEEEEEEETTCSEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCC--CCEEEEEEcCCCCceEEEE
Confidence 488988877665543 5666543 222222211 1234446888999965 8888876654 4699
Q ss_pred EeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCC--------------cEEEEeecCCCCeeeEE-eecc
Q 036510 83 IWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG--------------NISVFTARADGGWDTSR-IDQA 147 (288)
Q Consensus 83 iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~--------------~i~i~d~~~~~~~~~~~-~~~~ 147 (288)
+||+.++... . ..+ +...+..++|+|+ . . ++.++.++ .|++|++.++....... ....
T Consensus 193 v~dl~tg~~~-~-~~~--~~~~~~~~~wspD-~-~-l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~ 265 (741)
T 1yr2_A 193 FVGVADGKPL-A-DEL--KWVKFSGLAWLGN-D-A-LLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPE 265 (741)
T ss_dssp EEETTTCCEE-E-EEE--EEEESCCCEESTT-S-E-EEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTT
T ss_pred EEECCCCCCC-C-ccC--CCceeccEEEECC-C-E-EEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCC
Confidence 9999876531 1 111 1122467899998 3 3 44444444 38888876543211111 1223
Q ss_pred CCCCeeEEEeCCCCCCCceecccccCCCceeEEeecC-----CcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCC
Q 036510 148 HPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD-----NTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLG 222 (288)
Q Consensus 148 ~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~ 222 (288)
++..+..+.|+|++ ++|+..+.+ ..|.+||+.++... +...+..+...+.... +|++
T Consensus 266 ~~~~~~~~~~SpDG--------------~~l~~~~~~~~~~~~~l~~~d~~~~~~~--~~~~l~~~~~~~~~~~-~~dg- 327 (741)
T 1yr2_A 266 LPKRGHGASVSSDG--------------RWVVITSSEGTDPVNTVHVARVTNGKIG--PVTALIPDLKAQWDFV-DGVG- 327 (741)
T ss_dssp CTTCEEEEEECTTS--------------CEEEEEEECTTCSCCEEEEEEEETTEEC--CCEEEECSSSSCEEEE-EEET-
T ss_pred CCeEEEEEEECCCC--------------CEEEEEEEccCCCcceEEEEECCCCCCc--ccEEecCCCCceEEEE-eccC-
Confidence 34458899999987 555544433 47999999875211 0122333444444443 3663
Q ss_pred CCCcEEEEEeCC----CcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 223 LPKSTIASASED----GKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 223 ~~~~~l~s~s~D----~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
+.|+..+.+ +.|.+|++.... .....++......+..++|+ ++.++++...|+..+||.
T Consensus 328 ---~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~ 390 (741)
T 1yr2_A 328 ---DQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLA 390 (741)
T ss_dssp ---TEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEE
T ss_pred ---CEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEE
Confidence 566666653 348888876421 11123333334456678887 667888888899888885
No 204
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.17 E-value=2e-08 Score=84.71 Aligned_cols=232 Identities=9% Similarity=-0.035 Sum_probs=135.4
Q ss_pred ccceEEEEEcCCCC-EEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCC
Q 036510 11 EDTVHDVAMDYYGK-RLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNS 89 (288)
Q Consensus 11 ~~~v~~~~~s~~g~-~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~ 89 (288)
.....+..|+++|+ ++++...++.|..|+.++ . ...+..+...+..++++++ |+++++...++.|.+|+.. +
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g-~---~~~~~~~~~~~~gl~~d~d--G~l~v~~~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG-T---VDVLLDATAFTNGNAVDAQ--QRLVHCEHGRRAITRSDAD-G 116 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS-C---EEEEEESCSCEEEEEECTT--SCEEEEETTTTEEEEECTT-S
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC-C---EEEEeCCCCccceeeECCC--CCEEEEECCCCEEEEECCC-C
Confidence 34556788999998 567777788999998632 2 3344556677899999764 7777766667889999874 3
Q ss_pred CceEEeE-Eeec-CCCceeEEEeccCCCCeEEEE----EeC-------------CCcEEEEeecCCCCeeeEEeeccCCC
Q 036510 90 NEWIKDH-VFED-HKSSVNSIDWAPHELGLCLAC----GSS-------------DGNISVFTARADGGWDTSRIDQAHPV 150 (288)
Q Consensus 90 ~~~~~~~-~~~~-h~~~v~~l~~~p~~~~~~l~s----g~~-------------d~~i~i~d~~~~~~~~~~~~~~~~~~ 150 (288)
. ..... ...+ ....++.+.+.|+ +.+.++ |.. .+.|..||...+. ..... ...
T Consensus 117 ~-~~~~~~~~~~~~~~~~~~i~~d~d--G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~-~~~~~----~~~ 188 (305)
T 3dr2_A 117 Q-AHLLVGRYAGKRLNSPNDLIVARD--GAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP-LQRMA----DLD 188 (305)
T ss_dssp C-EEEEECEETTEECSCCCCEEECTT--SCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC-CEEEE----EES
T ss_pred C-EEEEEeccCCCccCCCCCEEECCC--CCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCc-EEEEe----cCC
Confidence 3 21111 1111 1134677899887 555554 321 2456666654332 22211 122
Q ss_pred CeeEEEeCCCCCCCceecccccCCCceeEEeecC------CcEEEEEEeCCce-eeeeeeccccCCcceEEEEecCCCCC
Q 036510 151 GVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD------NTVKVWKLYNGIW-KMDCFPALQMHTDWVRDVAWAPNLGL 223 (288)
Q Consensus 151 ~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~ 223 (288)
....+.|+|++ +.|+.+... +.|.+||+..+.. ..+..... .......+.+.+++
T Consensus 189 ~p~gl~~spdg--------------~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~--~~~~pdgi~~d~~G-- 250 (305)
T 3dr2_A 189 HPNGLAFSPDE--------------QTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV--PDGLPDGFCVDRGG-- 250 (305)
T ss_dssp SEEEEEECTTS--------------SEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC--SSSCCCSEEECTTS--
T ss_pred CCcceEEcCCC--------------CEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC--CCCCCCeEEECCCC--
Confidence 35678899987 444444443 6899999875421 01111111 12223556777763
Q ss_pred CCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEE
Q 036510 224 PKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTL 284 (288)
Q Consensus 224 ~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~ 284 (288)
++. .+..+ .|.+|+.+.. ....+.. ...+..++|+|+++.|..++.++..++
T Consensus 251 --~lw-v~~~~-gv~~~~~~g~----~~~~~~~-~~~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 251 --WLW-SSSGT-GVCVFDSDGQ----LLGHIPT-PGTASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp --CEE-ECCSS-EEEEECTTSC----EEEEEEC-SSCCCEEEECTTSCEEEEEETTEEEEE
T ss_pred --CEE-EecCC-cEEEECCCCC----EEEEEEC-CCceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 434 34444 4888886421 1122222 235788999999999888887655444
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.17 E-value=1.4e-07 Score=78.37 Aligned_cols=237 Identities=7% Similarity=-0.023 Sum_probs=147.7
Q ss_pred ccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCC
Q 036510 11 EDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN 90 (288)
Q Consensus 11 ~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~ 90 (288)
...+.++.++++|+++++...++.|..+|.. +.. ....+......+..+++.+ ++.++++...++.|..++.. +.
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-~~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~~~~-g~ 135 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-TEYPLPQPDSGPYGITEGL--NGDIWFTQLNGDRIGKLTAD-GT 135 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECS--TTCEEEEETTTTEEEEECTT-SC
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-EEecCCCCCCCCccceECC--CCCEEEEccCCCeEEEECCC-CC
Confidence 3567889999999988877777888888865 322 1222233346688999874 47888887778899999875 33
Q ss_pred ceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceeccc
Q 036510 91 EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSG 170 (288)
Q Consensus 91 ~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~ 170 (288)
. ....+......+.++.+.|+ +.+.++...++.|..|+. .+ ..... ....+...+..+.+++++
T Consensus 136 -~-~~~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~~i~~~~~-~g-~~~~~-~~~~~~~~~~~i~~d~~g--------- 199 (300)
T 2qc5_A 136 -I-YEYDLPNKGSYPAFITLGSD--NALWFTENQNNSIGRITN-TG-KLEEY-PLPTNAAAPVGITSGNDG--------- 199 (300)
T ss_dssp -E-EEEECSSTTCCEEEEEECTT--SSEEEEETTTTEEEEECT-TC-CEEEE-ECSSTTCCEEEEEECTTS---------
T ss_pred -E-EEccCCCCCCCceeEEECCC--CCEEEEecCCCeEEEECC-CC-cEEEe-eCCCCCCCcceEEECCCC---------
Confidence 2 11223333456889999887 455665555778888887 32 22221 112233456778887765
Q ss_pred ccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCccc
Q 036510 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWE 250 (288)
Q Consensus 171 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~ 250 (288)
++.++....+.|.++|. ++.. ... .+..+...+.++.+.+++ .+.++...++.|..|+.. . .. .
T Consensus 200 -----~l~v~~~~~~~i~~~~~-~g~~--~~~-~~~~~~~~~~~i~~d~~g----~l~v~~~~~~~i~~~~~~-g-~~-~ 263 (300)
T 2qc5_A 200 -----ALWFVEIMGNKIGRITT-TGEI--SEY-DIPTPNARPHAITAGKNS----EIWFTEWGANQIGRITND-N-TI-Q 263 (300)
T ss_dssp -----SEEEEETTTTEEEEECT-TCCE--EEE-ECSSTTCCEEEEEECSTT----CEEEEETTTTEEEEECTT-S-CE-E
T ss_pred -----CEEEEccCCCEEEEEcC-CCcE--EEE-ECCCCCCCceEEEECCCC----CEEEeccCCCeEEEECCC-C-cE-E
Confidence 45555555667888887 3321 111 122334567899999873 566666667899999863 1 11 1
Q ss_pred ceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 251 GKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 251 ~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
...+......+.++++.|+|+++++.. + .|..++
T Consensus 264 ~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~ 297 (300)
T 2qc5_A 264 EYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLN 297 (300)
T ss_dssp EEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEE
T ss_pred EEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeC
Confidence 111111234578899999999766554 4 665555
No 206
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.16 E-value=2.4e-09 Score=89.44 Aligned_cols=184 Identities=11% Similarity=0.026 Sum_probs=118.9
Q ss_pred CCEEEEeeCCCcEEEeecCCCCceEEeEEeecCC-CceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeecc
Q 036510 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHK-SSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQA 147 (288)
Q Consensus 69 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~-~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~ 147 (288)
+++|++++.|+.|.+||..+++ ....+..+. ..+.++.+.|+ +.+++ +.++.|..||. ++.. ..+....
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~---~~w~~~~~~~~~~~~~~~~pd--G~ilv--s~~~~V~~~d~-~G~~--~W~~~~~ 74 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKE---IVWEYPLEKGWECNSVAATKA--GEILF--SYSKGAKMITR-DGRE--LWNIAAP 74 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTE---EEEEEECCTTCCCCEEEECTT--SCEEE--ECBSEEEEECT-TSCE--EEEEECC
T ss_pred CcEEEeeCCCCEEEEEECCCCe---EEEEeCCCccCCCcCeEECCC--CCEEE--eCCCCEEEECC-CCCE--EEEEcCC
Confidence 7899999999999999987765 345565554 46889999997 56666 45778988887 4431 2222222
Q ss_pred CCCCeeEEEeCCCCCCCceecccccCCCceeEEeec-CCcEEEEEEeCCce--eeeeeeccccCCcceEEEEecCCCCCC
Q 036510 148 HPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGC-DNTVKVWKLYNGIW--KMDCFPALQMHTDWVRDVAWAPNLGLP 224 (288)
Q Consensus 148 ~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~-d~~i~iwd~~~~~~--~~~~~~~~~~h~~~V~~v~~sp~~~~~ 224 (288)
....+.++.+.|++ +++++.+. ++.|..+|. ++.. .........++..+...+.+.++
T Consensus 75 ~~~~~~~~~~~~dG--------------~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~---- 135 (276)
T 3no2_A 75 AGCEMQTARILPDG--------------NALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKK---- 135 (276)
T ss_dssp TTCEEEEEEECTTS--------------CEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTT----
T ss_pred CCccccccEECCCC--------------CEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCC----
Confidence 23457778888876 66777665 555655553 3321 11110011122223445566676
Q ss_pred CcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 225 KSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 225 ~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
++++++...++.|..||.+ .+..+. ......+.++.+.|+|+.++++..++.|..+|
T Consensus 136 G~~lv~~~~~~~v~~~d~~-G~~~w~----~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d 192 (276)
T 3no2_A 136 GNYLVPLFATSEVREIAPN-GQLLNS----VKLSGTPFSSAFLDNGDCLVACGDAHCFVQLN 192 (276)
T ss_dssp SCEEEEETTTTEEEEECTT-SCEEEE----EECSSCCCEEEECTTSCEEEECBTTSEEEEEC
T ss_pred CCEEEEecCCCEEEEECCC-CCEEEE----EECCCCccceeEcCCCCEEEEeCCCCeEEEEe
Confidence 4789999999999999975 322111 11124567788899999999888888887776
No 207
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.13 E-value=1.3e-08 Score=86.96 Aligned_cols=215 Identities=6% Similarity=-0.110 Sum_probs=129.7
Q ss_pred CCCcEEEEEeCCCCceeeEEEe------ccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCc
Q 036510 31 SDYSIKIIGVGNNTSQHLAKLS------GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSS 104 (288)
Q Consensus 31 ~d~~i~lwd~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~ 104 (288)
.+++|.++|.... +....+. ........+.+. .+.++++...+++|.+||..+.+ ....++ ....
T Consensus 15 ~~~~l~~~d~~t~--~~~~~i~~~~n~~~lg~~~~~i~~~---~~~lyv~~~~~~~v~viD~~t~~---~~~~i~-~~~~ 85 (328)
T 3dsm_A 15 SNATLSYYDPATC--EVENEVFYRANGFKLGDVAQSMVIR---DGIGWIVVNNSHVIFAIDINTFK---EVGRIT-GFTS 85 (328)
T ss_dssp CCBEEEEEETTTT--EEECSHHHHHHSSCCBSCEEEEEEE---TTEEEEEEGGGTEEEEEETTTCC---EEEEEE-CCSS
T ss_pred CCceEEEEECCCC--EEhhhhHhhhcCcccCccceEEEEE---CCEEEEEEcCCCEEEEEECcccE---EEEEcC-CCCC
Confidence 4889999997533 3222221 111335677774 25677777888999999998765 333444 2356
Q ss_pred eeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccC----CCCeeEEEeCCCCCCCceecccccCCCceeEE
Q 036510 105 VNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAH----PVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180 (288)
Q Consensus 105 v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~----~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s 180 (288)
...++++|+ +.++++...++.|.+||..+..... ....+. ......+.+ . .+.++++
T Consensus 86 p~~i~~~~~--g~lyv~~~~~~~v~~iD~~t~~~~~--~i~~g~~~~~~~~p~~i~~-~--------------~~~lyv~ 146 (328)
T 3dsm_A 86 PRYIHFLSD--EKAYVTQIWDYRIFIINPKTYEITG--YIECPDMDMESGSTEQMVQ-Y--------------GKYVYVN 146 (328)
T ss_dssp EEEEEEEET--TEEEEEEBSCSEEEEEETTTTEEEE--EEECTTCCTTTCBCCCEEE-E--------------TTEEEEE
T ss_pred CcEEEEeCC--CeEEEEECCCCeEEEEECCCCeEEE--EEEcCCccccCCCcceEEE-E--------------CCEEEEE
Confidence 788999887 5555555578999999987642111 111111 002223333 1 1244455
Q ss_pred ee-cCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCC----------CcEEEEEeecCCCcc
Q 036510 181 GG-CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASED----------GKVIIWTVAREGDQW 249 (288)
Q Consensus 181 ~~-~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D----------~~i~iw~~~~~~~~~ 249 (288)
.. .++.|.++|..++. ....+.... ....+.++|++ +++++...+ +.|.++|....+
T Consensus 147 ~~~~~~~v~viD~~t~~----~~~~i~~g~-~p~~i~~~~dG----~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~--- 214 (328)
T 3dsm_A 147 CWSYQNRILKIDTETDK----VVDELTIGI-QPTSLVMDKYN----KMWTITDGGYEGSPYGYEAPSLYRIDAETFT--- 214 (328)
T ss_dssp ECTTCCEEEEEETTTTE----EEEEEECSS-CBCCCEECTTS----EEEEEBCCBCTTCSSCBCCCEEEEEETTTTE---
T ss_pred cCCCCCEEEEEECCCCe----EEEEEEcCC-CccceEEcCCC----CEEEEECCCccCCccccCCceEEEEECCCCe---
Confidence 43 48899999988763 222222222 23577888874 556666554 789999876421
Q ss_pred cceEee-ccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 250 EGKVLH-DFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 250 ~~~~~~-~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
....+. ........++|+|||++|.++.. +|.+||.
T Consensus 215 v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~ 251 (328)
T 3dsm_A 215 VEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPV 251 (328)
T ss_dssp EEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEET
T ss_pred EEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEEC
Confidence 111121 11346889999999999988765 8888885
No 208
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.13 E-value=2.3e-07 Score=79.10 Aligned_cols=230 Identities=10% Similarity=-0.028 Sum_probs=132.8
Q ss_pred eEEEEEcCCC-CEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCce
Q 036510 14 VHDVAMDYYG-KRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEW 92 (288)
Q Consensus 14 v~~~~~s~~g-~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~ 92 (288)
..+..|++++ .++++...++.|..|+...+ + ...+. +...+.+++|+++ ++++++. .+ .|.+||..++. .
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~--~-~~~~~-~~~~v~~i~~~~d--g~l~v~~-~~-gl~~~d~~~g~-~ 121 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASG--R-KTVHA-LPFMGSALAKISD--SKQLIAS-DD-GLFLRDTATGV-L 121 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTT--E-EEEEE-CSSCEEEEEEEET--TEEEEEE-TT-EEEEEETTTCC-E
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCC--c-EEEEE-CCCcceEEEEeCC--CeEEEEE-CC-CEEEEECCCCc-E
Confidence 4567899874 56666667888999987543 2 22222 3457899999754 6766654 43 48899986554 2
Q ss_pred EEeEEeec--CCCceeEEEeccCCCCeEEEEEeCC----CcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCce
Q 036510 93 IKDHVFED--HKSSVNSIDWAPHELGLCLACGSSD----GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL 166 (288)
Q Consensus 93 ~~~~~~~~--h~~~v~~l~~~p~~~~~~l~sg~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~ 166 (288)
........ ....++.+.++|+ +.++++...+ +...||.+. .+.... .. .+......+.|+|++.
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~--G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~--~~-~~~~~~~~i~~s~dg~---- 191 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPS--GALWIGTMGRKAETGAGSIYHVA-KGKVTK--LF-ADISIPNSICFSPDGT---- 191 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTT--SCEEEEEEETTCCTTCEEEEEEE-TTEEEE--EE-EEESSEEEEEECTTSC----
T ss_pred EEEeeCCCCCCCCCCCCEEECCC--CCEEEEeCCCcCCCCceEEEEEe-CCcEEE--ee-CCCcccCCeEEcCCCC----
Confidence 11111111 1235788999997 4444433211 233444443 222211 11 1122356788999872
Q ss_pred ecccccCCCceeEEeecCCcEEEEEEe--CC-cee-eeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEe
Q 036510 167 VGSGFLDPVQKLCSGGCDNTVKVWKLY--NG-IWK-MDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV 242 (288)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~-~~~-~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~ 242 (288)
.+.++.+.++.|.+||+. ++ ... .+....+.........+.+.+++ .+.++...++.|..|+.
T Consensus 192 ---------~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G----~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 192 ---------TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG----HIWNARWGEGAVDRYDT 258 (326)
T ss_dssp ---------EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS----CEEEEEETTTEEEEECT
T ss_pred ---------EEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC----CEEEEEeCCCEEEEECC
Confidence 234455567889999985 44 211 11222223333456788888863 56666666788999986
Q ss_pred ecCCCcccceEeeccccCeEEEEee-cCCCEEEEEeCC
Q 036510 243 AREGDQWEGKVLHDFKTPVYRVSWS-LTGNILAVADGN 279 (288)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~i~~~~~s-pdg~~l~s~~~d 279 (288)
+ . . ....+......+.+++|+ ||++.|++++..
T Consensus 259 ~-g-~--~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 259 D-G-N--HIARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp T-C-C--EEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred C-C-C--EEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 3 1 1 112233334568999999 998877666543
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.12 E-value=3.1e-07 Score=79.93 Aligned_cols=236 Identities=11% Similarity=0.047 Sum_probs=132.1
Q ss_pred EEEEcCCCCEEEEee----------CCCcEEEEEeCCCCceeeEEEecc-------ccCeEEEEecCCCCCCEEEEeeC-
Q 036510 16 DVAMDYYGKRLATAS----------SDYSIKIIGVGNNTSQHLAKLSGH-------KGAVWEVAWAHPKFGSILASCSF- 77 (288)
Q Consensus 16 ~~~~s~~g~~l~s~~----------~d~~i~lwd~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~~l~s~s~- 77 (288)
.+.|+|||++|+.+. .+++|.++|... .+.+..+.-- ...-..+.++++ |++|..+..
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t--~~~~~~i~~~~~~~~~~g~~p~~~~~spD--G~~l~v~n~~ 145 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT--FLPIADIELPDAPRFDVGPYSWMNANTPN--NADLLFFQFA 145 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC--CcEEEEEECCCccccccCCCccceEECCC--CCEEEEEecC
Confidence 788999999988876 367899999743 2334433211 112357888865 788877764
Q ss_pred -CCcEEEeecCCCCceEEeEE-eecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeec--cCCCCe-
Q 036510 78 -DGTVIIWKEGNSNEWIKDHV-FEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQ--AHPVGV- 152 (288)
Q Consensus 78 -d~~v~iwd~~~~~~~~~~~~-~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~v- 152 (288)
+++|.++| .+.. .... +... .|+.+.|.+ ...+++.+.||.+.+++. .+.......... .....+
T Consensus 146 ~~~~v~viD-~t~~---~~~~~i~~~----~~~~~~~~~-~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~ 215 (373)
T 2mad_H 146 AGPAVGLVV-QGGS---SDDQLLSSP----TCYHIHPGA-PSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLL 215 (373)
T ss_pred CCCeEEEEE-CCCC---EEeEEcCCC----ceEEEEeCC-CceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCccee
Confidence 58899999 7654 2233 3211 234455654 334566778999999998 543221110000 000110
Q ss_pred eEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeecccc----------CCcceEEEEecCCCC
Q 036510 153 TSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQM----------HTDWVRDVAWAPNLG 222 (288)
Q Consensus 153 ~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~----------h~~~V~~v~~sp~~~ 222 (288)
....+.+++ ..+++. +.++.+.+.|+..+... .+..+.. ......-+.++|+.
T Consensus 216 ~~~~~~~~~-------------~~~~~~-~~~~~v~vid~~~~~~~--v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~- 278 (373)
T 2mad_H 216 TQPAQANKS-------------GRIVWP-VYSGKILQADISAAGAT--NKAPIDALSGGRKADTWRPGGWQQVAYLKSS- 278 (373)
T ss_pred ecceeEecC-------------CEEEEE-cCCceEEEEeccCCcce--EeeeeeecCCcccccceecCceEeEEECCCC-
Confidence 112223322 122333 25678888888653211 1111110 11223446788874
Q ss_pred CCCcEEEEEe---------CCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCC-EEEEEe-CCCcEEEeEcC
Q 036510 223 LPKSTIASAS---------EDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGN-ILAVAD-GNNNVTLWEEA 288 (288)
Q Consensus 223 ~~~~~l~s~s---------~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~-~l~s~~-~d~~v~~w~~~ 288 (288)
....++.. .++.|.+.|....+ ....+ ........++|+|||+ +++++. .+++|.++|.+
T Consensus 279 --~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~---vv~~i-~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 279 --DGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ---TSSQI-SLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred --CEEEEEeccCCcccccCCCCeEEEEECCCCE---EEEEE-ECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 23344432 13578888876432 11222 2334578999999999 777777 58999999963
No 210
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.09 E-value=2.8e-08 Score=85.42 Aligned_cols=234 Identities=9% Similarity=0.054 Sum_probs=137.7
Q ss_pred cceEEEEEcCCCCEEEEeeC--CCcEEEEEeCCCCceeeEEE-------eccccCeEEEEecCCCCCCEEEEeeC-----
Q 036510 12 DTVHDVAMDYYGKRLATASS--DYSIKIIGVGNNTSQHLAKL-------SGHKGAVWEVAWAHPKFGSILASCSF----- 77 (288)
Q Consensus 12 ~~v~~~~~s~~g~~l~s~~~--d~~i~lwd~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~~~l~s~s~----- 77 (288)
.....++++++|+++++... ++.++||.++. ++ +..+ .+|...+..++++++ ++++++-..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~--g~-~~~~p~~~~~~~~~~~~p~gv~~d~~--g~L~v~D~g~~~~~ 91 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQ--DG-LIPFPPQSGNAIITFDTVLGIKSDGN--GIVWMLDNGNQSKS 91 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEET--TE-EEESCCCCSSCCCCCSCEEEEEECSS--SEEEEEECHHHHTS
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECC--CC-eecCCCcccCcccceeEeeEEEEcCC--CcEEEEcCCCCcCC
Confidence 56788999999999988642 34366776642 22 2211 235677899999754 666665443
Q ss_pred CCcEEEeecCCCCceEEeEEeec------CCCceeEEEeccCCCCeEEEEEe---CCCcEEEEeecCCCCeeeEEeeccC
Q 036510 78 DGTVIIWKEGNSNEWIKDHVFED------HKSSVNSIDWAPHELGLCLACGS---SDGNISVFTARADGGWDTSRIDQAH 148 (288)
Q Consensus 78 d~~v~iwd~~~~~~~~~~~~~~~------h~~~v~~l~~~p~~~~~~l~sg~---~d~~i~i~d~~~~~~~~~~~~~~~~ 148 (288)
++.|.+||+.++. ....+.. +....+.+++.|++ +.++++.. .++.|.+||+..+.. .+....|
T Consensus 92 ~~~i~~~d~~tg~---~~~~~~~~~~~~~~~~~~~~v~vd~~~-g~~yvtd~~~~~~~~i~v~d~~~g~~---~r~~~~~ 164 (343)
T 2qe8_A 92 VPKLVAWDTLNNQ---LSRVIYLPPPITLSNSFVNDLAVDLIH-NFVYISDPAPDDKAALIRVDLQTGLA---ARVLQGY 164 (343)
T ss_dssp CCEEEEEETTTTE---EEEEEECCTTTSCTTCCCCEEEEETTT-TEEEEEECCSGGGCEEEEEETTTCCE---EEECTTC
T ss_pred CCeEEEEECCCCe---EEEEEECChhhcccccccceEEEecCC-CEEEEEcCccCCCCeEEEEECCCCCE---EEEecCC
Confidence 5889999987654 1222321 22346889998763 45556655 678999999875432 1222221
Q ss_pred C-----------------------------CCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCc---
Q 036510 149 P-----------------------------VGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGI--- 196 (288)
Q Consensus 149 ~-----------------------------~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--- 196 (288)
. ..+..|.|+|++ +.|+.+..++. ++|.+....
T Consensus 165 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg--------------~~ly~~~~~~~-~l~~~~~~~~~~ 229 (343)
T 2qe8_A 165 PGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAEN--------------EWLYLSPMHST-SMYRIKSADLSN 229 (343)
T ss_dssp TTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTS--------------CEEEEEESSCS-EEEEEEHHHHTC
T ss_pred CcccccccceeECCEEEEeccCCCceeceecccceeEeccCC--------------CEEEEEeCCCC-eEEEEEHHHhcC
Confidence 1 123445555554 56666655553 556553210
Q ss_pred ---eeeeeeec--cccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeecc-ccCeEEEEeecCC
Q 036510 197 ---WKMDCFPA--LQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDF-KTPVYRVSWSLTG 270 (288)
Q Consensus 197 ---~~~~~~~~--~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~-~~~i~~~~~spdg 270 (288)
...+.... ..++......++++++ +.++++...++.|.+||.+.. . ........ ...+..++|.|+|
T Consensus 230 ~~~~~~~~~~~~~~~g~~g~pdgia~d~~----G~l~va~~~~~~V~~~d~~~G--~-~~~~~~~~~~~~p~~va~~~~g 302 (343)
T 2qe8_A 230 LQLTDAELGSKIERYSEKPICDGISIDKD----HNIYVGDLAHSAIGVITSADR--A-YKLLVTDEKLSWTDSFNFGSDG 302 (343)
T ss_dssp TTCCHHHHHTTCEEEEECCSCSCEEECTT----CCEEEEEGGGTEEEEEETTTT--E-EEEEEECGGGSCEEEEEECTTS
T ss_pred CCCChhhhhcceEecccCCCCceEEECCC----CCEEEEccCCCeEEEEECCCC--C-EEEEEECCceecCCeeEECCCC
Confidence 00000000 1123334566888887 468888888999999997221 1 11222211 3468899999999
Q ss_pred CEEEEEeCC
Q 036510 271 NILAVADGN 279 (288)
Q Consensus 271 ~~l~s~~~d 279 (288)
+++++.+..
T Consensus 303 ~l~v~~~~~ 311 (343)
T 2qe8_A 303 YLYFDCNQL 311 (343)
T ss_dssp CEEEEECCG
T ss_pred cEEEEeCcc
Confidence 988887643
No 211
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.07 E-value=3e-08 Score=83.41 Aligned_cols=203 Identities=9% Similarity=0.102 Sum_probs=123.2
Q ss_pred cccceEEEEEcCC-CCEEEEeeCCCcEEEEEeCCCCceee-EEE-ec-cccCeEEEEecCCCCCCEEEEeeCC-------
Q 036510 10 HEDTVHDVAMDYY-GKRLATASSDYSIKIIGVGNNTSQHL-AKL-SG-HKGAVWEVAWAHPKFGSILASCSFD------- 78 (288)
Q Consensus 10 h~~~v~~~~~s~~-g~~l~s~~~d~~i~lwd~~~~~~~~~-~~~-~~-h~~~v~~~~~~~~~~~~~l~s~s~d------- 78 (288)
+...+.++.++++ |+++++.. ...|.+|+.+ +....+ ... .+ +...++++++.++ ++++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~~~~~~~ 144 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYE--GNLWITAPAGEVAPADY 144 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTT--SCEEEEECBCBCTTSCC
T ss_pred CCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCC--CCEEEEecCcccccccc
Confidence 4567889999999 77666554 4478888875 322111 110 01 1235788998754 7777777655
Q ss_pred --------CcEEEeecCCCCceEEeEEeecCCCceeEEEec----cCCCCeEEEEEeCCCcEEEEeecCCCCeee---EE
Q 036510 79 --------GTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWA----PHELGLCLACGSSDGNISVFTARADGGWDT---SR 143 (288)
Q Consensus 79 --------~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~----p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~---~~ 143 (288)
+.|..++.. +. .. . +..+......++|+ |++ ..++++...++.|.+|+....+.... ..
T Consensus 145 ~~~~~~~~~~l~~~~~~-g~-~~--~-~~~~~~~~~~i~~~~~~d~dg-~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~ 218 (314)
T 1pjx_A 145 TRSMQEKFGSIYCFTTD-GQ-MI--Q-VDTAFQFPNGIAVRHMNDGRP-YQLIVAETPTKKLWSYDIKGPAKIENKKVWG 218 (314)
T ss_dssp CBTTSSSCEEEEEECTT-SC-EE--E-EEEEESSEEEEEEEECTTSCE-EEEEEEETTTTEEEEEEEEETTEEEEEEEEE
T ss_pred cccccCCCCeEEEECCC-CC-EE--E-eccCCCCcceEEEecccCCCC-CEEEEEECCCCeEEEEECCCCCccccceEEE
Confidence 456666553 22 21 1 11223456888999 873 13455556678999999762222211 11
Q ss_pred eeccCC-CCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCC
Q 036510 144 IDQAHP-VGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLG 222 (288)
Q Consensus 144 ~~~~~~-~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~ 222 (288)
....+. .....+.+++++ ++.++...++.|.+||..++. ....+..+...+.++.|+|++
T Consensus 219 ~~~~~~~~~p~~i~~d~~G--------------~l~v~~~~~~~i~~~d~~~g~----~~~~~~~~~~~~~~i~~~~dg- 279 (314)
T 1pjx_A 219 HIPGTHEGGADGMDFDEDN--------------NLLVANWGSSHIEVFGPDGGQ----PKMRIRCPFEKPSNLHFKPQT- 279 (314)
T ss_dssp ECCCCSSCEEEEEEEBTTC--------------CEEEEEETTTEEEEECTTCBS----CSEEEECSSSCEEEEEECTTS-
T ss_pred ECCCCCCCCCCceEECCCC--------------CEEEEEcCCCEEEEEcCCCCc----EeEEEeCCCCCceeEEECCCC-
Confidence 112222 446677888775 566776678899999976442 222334455678999999874
Q ss_pred CCCc-EEEEEeCCCcEEEEEeec
Q 036510 223 LPKS-TIASASEDGKVIIWTVAR 244 (288)
Q Consensus 223 ~~~~-~l~s~s~D~~i~iw~~~~ 244 (288)
. ++++...++.|..|++..
T Consensus 280 ---~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 280 ---KTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp ---SEEEEEETTTTEEEEEECSS
T ss_pred ---CEEEEEeCCCCeEEEEeCCC
Confidence 4 556666778999998764
No 212
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.01 E-value=1.6e-07 Score=78.94 Aligned_cols=194 Identities=12% Similarity=0.098 Sum_probs=114.9
Q ss_pred ccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEec--cccCeEEEEecCCCCCCEEEEeeC---------CC
Q 036510 11 EDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSG--HKGAVWEVAWAHPKFGSILASCSF---------DG 79 (288)
Q Consensus 11 ~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~l~s~s~---------d~ 79 (288)
...+.++.++++|+++++. +..|.+||...+..+.+..... ....++.++++++ |+++++... ..
T Consensus 53 ~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~d--G~l~~~~~~~~~~~~~~~~~ 128 (297)
T 3g4e_A 53 DAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPA--GRYFAGTMAEETAPAVLERH 128 (297)
T ss_dssp SSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTT--SCEEEEEEECCSBTTBCCTT
T ss_pred CCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCC--CCEEEecCCcccccccccCC
Confidence 4578899999999966654 5678888875433222222211 1234788998754 777765432 23
Q ss_pred cEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeec-CCCCeeeEEe---eccCCCCeeEE
Q 036510 80 TVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTAR-ADGGWDTSRI---DQAHPVGVTSV 155 (288)
Q Consensus 80 ~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~-~~~~~~~~~~---~~~~~~~v~~i 155 (288)
...||.+........ +..+....+.++|+|++ ..++++.+.++.|..|++. ..+.....+. ...+......+
T Consensus 129 ~~~l~~~d~~g~~~~---~~~~~~~pngi~~spdg-~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~ 204 (297)
T 3g4e_A 129 QGALYSLFPDHHVKK---YFDQVDISNGLDWSLDH-KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGM 204 (297)
T ss_dssp CEEEEEECTTSCEEE---EEEEESBEEEEEECTTS-CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEE
T ss_pred CcEEEEEECCCCEEE---EeeccccccceEEcCCC-CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCee
Confidence 456666543332211 22223456899999984 3355666778899999974 2332221111 11122345667
Q ss_pred EeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEec-CCCCCCCcEEEEEeC
Q 036510 156 SWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWA-PNLGLPKSTIASASE 233 (288)
Q Consensus 156 ~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~s-p~~~~~~~~l~s~s~ 233 (288)
.+++++ ++.++....+.|..||..++. .+..+..+...+.+++|. |+. ..++++...
T Consensus 205 ~~d~~G--------------~lwva~~~~~~v~~~d~~tG~----~~~~i~~p~~~~t~~~f~g~d~---~~L~vt~~~ 262 (297)
T 3g4e_A 205 CIDAEG--------------KLWVACYNGGRVIRLDPVTGK----RLQTVKLPVDKTTSCCFGGKNY---SEMYVTCAR 262 (297)
T ss_dssp EEBTTS--------------CEEEEEETTTEEEEECTTTCC----EEEEEECSSSBEEEEEEESGGG---CEEEEEEBC
T ss_pred EECCCC--------------CEEEEEcCCCEEEEEcCCCce----EEEEEECCCCCceEEEEeCCCC---CEEEEEcCC
Confidence 777765 556666667789999987652 334445555678999998 764 234455544
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.95 E-value=5.1e-07 Score=79.52 Aligned_cols=198 Identities=10% Similarity=-0.042 Sum_probs=120.3
Q ss_pred cCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCC--cEEEEee
Q 036510 56 GAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG--NISVFTA 133 (288)
Q Consensus 56 ~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~--~i~i~d~ 133 (288)
...+.++|++ +++++++...++.|++||...+. ....... ..... ++|+|+ +..++.+..++ .|..++.
T Consensus 131 ~~P~~la~d~--~g~lyv~d~~~~~I~~id~~~g~---~~~~~~~-~~~~~-ia~~~~--g~~l~~~d~~~~~~I~~~d~ 201 (409)
T 3hrp_A 131 KYMWGIAAVG--NNTVLAYQRDDPRVRLISVDDNK---VTTVHPG-FKGGK-PAVTKD--KQRVYSIGWEGTHTVYVYMK 201 (409)
T ss_dssp CCEEEEEECS--TTEEEEEETTTTEEEEEETTTTE---EEEEEET-CCBCB-CEECTT--SSEEEEEBSSTTCEEEEEEG
T ss_pred CCceEEEEeC--CCCEEEEecCCCcEEEEECCCCE---EEEeecc-CCCCc-eeEecC--CCcEEEEecCCCceEEEEEc
Confidence 3568899975 37788888888999999986543 1122222 22333 889987 45566666655 6777776
Q ss_pred cCCCCeeeEEeecc-CCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeec--cccCCc
Q 036510 134 RADGGWDTSRIDQA-HPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPA--LQMHTD 210 (288)
Q Consensus 134 ~~~~~~~~~~~~~~-~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~~~h~~ 210 (288)
.............. .......+.++|+. ..|+.+..++.|..||..++.. ..+.. ..++..
T Consensus 202 ~~~~~~~~~g~~~~~~~~~p~~iav~p~~--------------g~lyv~d~~~~I~~~d~~~~~~--~~~~~~~~~g~~~ 265 (409)
T 3hrp_A 202 ASGWAPTRIGQLGSTFSGKIGAVALDETE--------------EWLYFVDSNKNFGRFNVKTQEV--TLIKQLELSGSLG 265 (409)
T ss_dssp GGTTCEEEEEECCTTSCSCCCBCEECTTS--------------SEEEEECTTCEEEEEETTTCCE--EEEEECCCCSCCC
T ss_pred CCCceeEEeeeccchhcCCcEEEEEeCCC--------------CeEEEEECCCcEEEEECCCCCE--EEEecccccCCCC
Confidence 54322111111111 33456677788743 2344456678899999766531 11110 122222
Q ss_pred ce--EEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeecc---------------ccCeEEEEeecCCCEE
Q 036510 211 WV--RDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDF---------------KTPVYRVSWSLTGNIL 273 (288)
Q Consensus 211 ~V--~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~---------------~~~i~~~~~spdg~~l 273 (288)
.- +.+.|+|+. +.++++-..++.|+.|+.... ...+.+. -.....++++|+|+++
T Consensus 266 ~~P~~~ia~~p~~---g~lyv~d~~~~~I~~~~~~g~-----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ly 337 (409)
T 3hrp_A 266 TNPGPYLIYYFVD---SNFYMSDQNLSSVYKITPDGE-----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFY 337 (409)
T ss_dssp CSSCCEEEEETTT---TEEEEEETTTTEEEEECTTCC-----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEE
T ss_pred CCccccEEEeCCC---CEEEEEeCCCCEEEEEecCCC-----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEE
Confidence 22 389999953 457777777888999975421 1112111 1347899999999977
Q ss_pred EEEe-CCCcEEEeE
Q 036510 274 AVAD-GNNNVTLWE 286 (288)
Q Consensus 274 ~s~~-~d~~v~~w~ 286 (288)
++-. .++.|+.|+
T Consensus 338 vad~~~~~~I~~~~ 351 (409)
T 3hrp_A 338 IVDGFKGYCLRKLD 351 (409)
T ss_dssp EEETTTTCEEEEEE
T ss_pred EEeCCCCCEEEEEE
Confidence 7666 788999998
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.87 E-value=7.2e-07 Score=77.50 Aligned_cols=239 Identities=11% Similarity=0.125 Sum_probs=131.1
Q ss_pred EEEEcCCCCEEEEee----------CCCcEEEEEeCCCCceeeEEEeccc-------cCeEEEEecCCCCCCEEEEeeC-
Q 036510 16 DVAMDYYGKRLATAS----------SDYSIKIIGVGNNTSQHLAKLSGHK-------GAVWEVAWAHPKFGSILASCSF- 77 (288)
Q Consensus 16 ~~~~s~~g~~l~s~~----------~d~~i~lwd~~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~~~l~s~s~- 77 (288)
.+.++|||++|+.++ .+++|.+||... .+.+..+.-.. ..-..++++++ |+++..+..
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t--~~v~~~I~v~~g~r~~~g~~P~~~a~spD--Gk~lyVan~~ 157 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT--LLPTADIELPDAPRFLVGTYPWMTSLTPD--GKTLLFYQFS 157 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT--CCEEEEEEETTCCCCCBSCCGGGEEECTT--SSEEEEEECS
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCC--CeEEEEEECCCccccccCCCCceEEEcCC--CCEEEEEEcC
Confidence 388999999887665 367899999854 34455543111 12356888865 777766653
Q ss_pred -CCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEE
Q 036510 78 -DGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVS 156 (288)
Q Consensus 78 -d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 156 (288)
+++|.++|..+.+ ...++... + |..+.|.+ .+.+++.+.||++.+.++...+.... . ...+
T Consensus 158 ~~~~VsVID~~t~~---vv~tI~v~-g---~~~~~P~g-~~~~~~~~~DG~~~~v~~~~~g~v~~-~-~~~~-------- 219 (386)
T 3sjl_D 158 PAPAVGVVDLEGKA---FKRMLDVP-D---CYHIFPTA-PDTFFMHCRDGSLAKVAFGTEGTPEI-T-HTEV-------- 219 (386)
T ss_dssp SSCEEEEEETTTTE---EEEEEECC-S---EEEEEEEE-TTEEEEEETTSCEEEEECCSSSCCEE-E-ECCC--------
T ss_pred CCCeEEEEECCCCc---EEEEEECC-C---cceeecCC-CceeEEECCCCCEEEEECCCCCeEEE-e-ecce--------
Confidence 7899999998754 33344321 1 22233443 34456778899998888875333211 1 1101
Q ss_pred eCCCCCCCceec-cccc-CCCceeEEeecCCcEEEEEEeCCceeeeeeeccc----------cCCcceEEEEecCCCCCC
Q 036510 157 WAPSTAPGALVG-SGFL-DPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQ----------MHTDWVRDVAWAPNLGLP 224 (288)
Q Consensus 157 ~~p~~~~~~~~~-~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----------~h~~~V~~v~~sp~~~~~ 224 (288)
+.+... .++. ..+. .+++++. .+.++.+.+.|+.++.. +....+. -.......+.++|+.
T Consensus 220 ~~~~~~--~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~--~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~--- 291 (386)
T 3sjl_D 220 FHPEDE--FLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDA--KFLPAVEALTEAERADGWRPGGWQQVAYHRAL--- 291 (386)
T ss_dssp CSCTTS--CBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSC--EECCCEESSCHHHHHTTEEECSSSCEEEETTT---
T ss_pred eccccc--cccccceeEcCCCcEEE-EeCCCEEEEEECCCCcc--eeecceeccccccccccccCCCcceeeECCCC---
Confidence 111110 0000 0111 1223333 45578999999865421 1111111 111223446777875
Q ss_pred CcEEEEEeC---------CCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCC-EEEEEe-CCCcEEEeEcC
Q 036510 225 KSTIASASE---------DGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGN-ILAVAD-GNNNVTLWEEA 288 (288)
Q Consensus 225 ~~~l~s~s~---------D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~-~l~s~~-~d~~v~~w~~~ 288 (288)
..+.++-.. .++|-+.|+...+. ...+ .....+.+++|+|||+ +|+++. .+++|.++|.+
T Consensus 292 ~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv---~~~i-~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~ 362 (386)
T 3sjl_D 292 DRIYLLVDQRDEWRHKTASRFVVVLDAKTGER---LAKF-EMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE 362 (386)
T ss_dssp TEEEEEEEECCTTCTTSCEEEEEEEETTTCCE---EEEE-EEEEEECEEEECSSSSCEEEEEETTTTEEEEEETT
T ss_pred CeEEEEeccccccccCCCCCEEEEEECCCCeE---EEEE-ECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 334444321 24677887765321 1111 1234678999999997 666654 58999999953
No 215
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.81 E-value=2.2e-06 Score=75.35 Aligned_cols=229 Identities=11% Similarity=0.078 Sum_probs=128.5
Q ss_pred CCCCEE-EEeeCCCcEEEEEeCCC--CceeeEEEe--------ccccCeEEEEecCCCCCCEEEEeeCC------CcEEE
Q 036510 21 YYGKRL-ATASSDYSIKIIGVGNN--TSQHLAKLS--------GHKGAVWEVAWAHPKFGSILASCSFD------GTVII 83 (288)
Q Consensus 21 ~~g~~l-~s~~~d~~i~lwd~~~~--~~~~~~~~~--------~h~~~v~~~~~~~~~~~~~l~s~s~d------~~v~i 83 (288)
+++++| +++-.+++|.+.|+... ..+...++. +. ..-..+...++ | +++++..+ +.+.+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~-s~Ph~~~~~pd--G-i~Vs~~g~~~g~~~g~v~v 168 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGY-SRLHTVHCGPD--A-IYISALGNEEGEGPGGILM 168 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCE-EEEEEEEECSS--C-EEEEEEEETTSCSCCEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCC-CcccceeECCC--e-EEEEcCCCcCCCCCCeEEE
Confidence 777775 45667889999998422 234455552 11 12234555543 6 77777666 78999
Q ss_pred eecCCCCceEEeEEeec--CC-CceeEEEeccCCCCeEEEEEe-------------------CCCcEEEEeecCCCCeee
Q 036510 84 WKEGNSNEWIKDHVFED--HK-SSVNSIDWAPHELGLCLACGS-------------------SDGNISVFTARADGGWDT 141 (288)
Q Consensus 84 wd~~~~~~~~~~~~~~~--h~-~~v~~l~~~p~~~~~~l~sg~-------------------~d~~i~i~d~~~~~~~~~ 141 (288)
.|..+.+ ....++. .. ..-+.+.|+|+. +.+++.. .+++|.+||+........
T Consensus 169 lD~~T~~---v~~~~~~~~~~~~~~Yd~~~~p~~--~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~t 243 (462)
T 2ece_A 169 LDHYSFE---PLGKWEIDRGDQYLAYDFWWNLPN--EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHS 243 (462)
T ss_dssp ECTTTCC---EEEECCSBCTTCCCCCCEEEETTT--TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEE
T ss_pred EECCCCe---EEEEEccCCCCccccceEEECCCC--CEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeE
Confidence 9987654 2333431 11 223457789984 4555553 368999999986422211
Q ss_pred EEeeccCC-CCeeEEE--eCCCCCCCceecccccCCCceeEEee-----cCCcEEEEEEeCCceeeeeeecccc------
Q 036510 142 SRIDQAHP-VGVTSVS--WAPSTAPGALVGSGFLDPVQKLCSGG-----CDNTVKVWKLYNGIWKMDCFPALQM------ 207 (288)
Q Consensus 142 ~~~~~~~~-~~v~~i~--~~p~~~~~~~~~~~~~~~~~~l~s~~-----~d~~i~iwd~~~~~~~~~~~~~~~~------ 207 (288)
+.-+.. .....+. |+|++. ..++++. .+++|.+|....+.+....+..+..
T Consensus 244 --I~vg~~g~~P~~i~f~~~Pdg~-------------~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~ 308 (462)
T 2ece_A 244 --LTLGEENRMALELRPLHDPTKL-------------MGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGN 308 (462)
T ss_dssp --EESCTTEEEEEEEEECSSTTCC-------------EEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSS
T ss_pred --EecCCCCCccceeEeeECCCCC-------------EEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccc
Confidence 111111 1233344 488873 2344444 5667877766555433222110100
Q ss_pred ----------CCcceEEEEecCCCCCCCcEEEEEe-CCCcEEEEEeecCCCcccceEeeccc--------------cCeE
Q 036510 208 ----------HTDWVRDVAWAPNLGLPKSTIASAS-EDGKVIIWTVAREGDQWEGKVLHDFK--------------TPVY 262 (288)
Q Consensus 208 ----------h~~~V~~v~~sp~~~~~~~~l~s~s-~D~~i~iw~~~~~~~~~~~~~~~~~~--------------~~i~ 262 (288)
-......+.+|||+ ++|-.+. ..+.|.+||+...........+...+ ....
T Consensus 309 lp~~~~~f~~~~~~pa~I~lS~DG----rfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr 384 (462)
T 2ece_A 309 LPEILKPFKAVPPLVTDIDISLDD----KFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQ 384 (462)
T ss_dssp CCGGGGGGTEECCCCCCEEECTTS----CEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCC
T ss_pred ccccccccccCCCceeEEEECCCC----CEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCC
Confidence 01346788999985 4444444 47899999986432221112221110 1246
Q ss_pred EEEeecCCCEEEEEe
Q 036510 263 RVSWSLTGNILAVAD 277 (288)
Q Consensus 263 ~~~~spdg~~l~s~~ 277 (288)
.++++|||++|+++.
T Consensus 385 ~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 385 MLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEECTTSSEEEEEC
T ss_pred EEEEcCCCCEEEEEc
Confidence 799999999999987
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.80 E-value=2.5e-07 Score=87.00 Aligned_cols=203 Identities=13% Similarity=0.029 Sum_probs=116.6
Q ss_pred ccccCeEEEEecCCCCCCEEEE-----eeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCC-
Q 036510 53 GHKGAVWEVAWAHPKFGSILAS-----CSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG- 126 (288)
Q Consensus 53 ~h~~~v~~~~~~~~~~~~~l~s-----~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~- 126 (288)
+|...+..++||++ |++|+- |+...+|++||+.++... . ..+.. .....++|+ |+ ..++.++.+.
T Consensus 126 ~~~~~l~~~~~SpD--g~~lAy~~~~~G~~~~~i~v~dl~tg~~~-~-~~~~~--~k~~~~~Ws-Dg--~~l~y~~~~~~ 196 (693)
T 3iuj_A 126 DGTTALDQLSFSRD--GRILAYSLSLAGSDWREIHLMDVESKQPL-E-TPLKD--VKFSGISWL-GN--EGFFYSSYDKP 196 (693)
T ss_dssp TSCCEEEEEEECTT--SSEEEEEEECSSCCEEEEEEEETTTCSEE-E-EEEEE--EESCCCEEE-TT--TEEEEEESSCC
T ss_pred CCcEEEEEEEECCC--CCEEEEEEecCCCceEEEEEEECCCCCCC-c-cccCC--ceeccEEEe-CC--CEEEEEEecCc
Confidence 35557888999875 888873 444468999999876522 1 12221 113577899 84 4456665553
Q ss_pred ------------cEEEEeecCCCCeeeEE-eecc-CCCCeeEEEeCCCCCCCceecccccCCCceeEEee---cCCcEEE
Q 036510 127 ------------NISVFTARADGGWDTSR-IDQA-HPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGG---CDNTVKV 189 (288)
Q Consensus 127 ------------~i~i~d~~~~~~~~~~~-~~~~-~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~---~d~~i~i 189 (288)
.|++|++.++....... .... |+.....+.|+|++. .++++.+ .++.|.+
T Consensus 197 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~-------------~l~~~~~~~~~~~~i~~ 263 (693)
T 3iuj_A 197 DGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDR-------------FLLISAANSTSGNRLYV 263 (693)
T ss_dssp C-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSC-------------EEEEEEESSSSCCEEEE
T ss_pred ccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCC-------------EEEEEEccCCCCcEEEE
Confidence 38888876543222211 1223 455578899999973 2333333 2357889
Q ss_pred EEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCC---CcEEEEEeecCCCcccceEeeccccCeEEEEe
Q 036510 190 WKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASED---GKVIIWTVAREGDQWEGKVLHDFKTPVYRVSW 266 (288)
Q Consensus 190 wd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D---~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~ 266 (288)
+|+.++... ...+..+.+..... |++++ +.+++....| +.|..+++.... ...-+.+..+...+. .|
T Consensus 264 ~d~~~~~~~---~~~l~~~~~~~~~~-~~~~g---~~l~~~t~~~~~~~~l~~~d~~~~~-~~~~~~l~~~~~~~~--~~ 333 (693)
T 3iuj_A 264 KDLSQENAP---LLTVQGDLDADVSL-VDNKG---STLYLLTNRDAPNRRLVTVDAANPG-PAHWRDLIPERQQVL--TV 333 (693)
T ss_dssp EETTSTTCC---CEEEECSSSSCEEE-EEEET---TEEEEEECTTCTTCEEEEEETTSCC-GGGCEEEECCCSSCE--EE
T ss_pred EECCCCCCc---eEEEeCCCCceEEE-EeccC---CEEEEEECCCCCCCEEEEEeCCCCC-ccccEEEecCCCCEE--EE
Confidence 998664211 12233444444444 55553 2445555544 467778776432 111123334444444 99
Q ss_pred ecCCCEEEEEeCCC---cEEEeEc
Q 036510 267 SLTGNILAVADGNN---NVTLWEE 287 (288)
Q Consensus 267 spdg~~l~s~~~d~---~v~~w~~ 287 (288)
+|+|+.|+....++ .|++|+.
T Consensus 334 s~~g~~lv~~~~~~g~~~l~~~d~ 357 (693)
T 3iuj_A 334 HSGSGYLFAEYMVDATARVEQFDY 357 (693)
T ss_dssp EEETTEEEEEEEETTEEEEEEECT
T ss_pred EEECCEEEEEEEECCeeEEEEEEC
Confidence 99999888776544 5777764
No 217
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.80 E-value=9.2e-07 Score=78.02 Aligned_cols=237 Identities=9% Similarity=0.053 Sum_probs=132.2
Q ss_pred EEEEcCCCCEEEEee----------CCCcEEEEEeCCCCceeeEEEecc-------ccCeEEEEecCCCCCCEEEEeeC-
Q 036510 16 DVAMDYYGKRLATAS----------SDYSIKIIGVGNNTSQHLAKLSGH-------KGAVWEVAWAHPKFGSILASCSF- 77 (288)
Q Consensus 16 ~~~~s~~g~~l~s~~----------~d~~i~lwd~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~~l~s~s~- 77 (288)
.+.++|||++|+.+. .++.|.++|... .+.+..+.-- ...-..+.++++ |+++..+..
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t--~~vv~~I~v~g~~r~~~g~~P~~~~~spD--Gk~lyV~n~~ 197 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT--FLPIADIELPDAPRFLVGTYQWMNALTPD--NKNLLFYQFS 197 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT--CCEEEEEEETTCCCCCBSCCGGGSEECTT--SSEEEEEECS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC--CcEEEEEECCCccccccCCCcceEEEcCC--CCEEEEEecC
Confidence 688999998887776 367899998753 3445544311 112345788765 777777653
Q ss_pred -CCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEE--eeccCCCC-ee
Q 036510 78 -DGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSR--IDQAHPVG-VT 153 (288)
Q Consensus 78 -d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~--~~~~~~~~-v~ 153 (288)
+++|.+.|..+.+ ....+.... +....|++. ..+++.+.||++.+.+...+ ...... ........ ..
T Consensus 198 ~~~~VsVID~~t~k---vv~~I~v~g----~~~~~p~g~-~~~v~~~~dG~~~~V~~~~~-~v~~~~~~~~~v~~~p~~~ 268 (426)
T 3c75_H 198 PAPAVGVVDLEGKT---FDRMLDVPD----CYHIFPASP-TVFYMNCRDGSLARVDFADG-ETKVTNTEVFHTEDELLIN 268 (426)
T ss_dssp SSCEEEEEETTTTE---EEEEEECCS----EEEEEEEET-TEEEEEETTSSEEEEECCTT-CCEEEECCCCSCTTSCBCS
T ss_pred CCCeEEEEECCCCe---EEEEEEcCC----ceeeccCCC-cEEEEEcCCCCEEEEECCCC-cEEEEeeeeeccCCCceee
Confidence 6899999987654 233343211 133345432 34556677888887777322 221100 00000000 01
Q ss_pred EEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccc----------cCCcceEEEEecCCCCC
Q 036510 154 SVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQ----------MHTDWVRDVAWAPNLGL 223 (288)
Q Consensus 154 ~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----------~h~~~V~~v~~sp~~~~ 223 (288)
.+.+.+++ ..++..+..+.+.+.|+..+... .+..+. ........+.++|++
T Consensus 269 ~~~~~~dg--------------~~~~~~s~~g~V~ViD~~~~~~~--v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg-- 330 (426)
T 3c75_H 269 HPAFSLRS--------------GRLVWPTYTGKIFQADLTAEGAT--FRAPIEALTEAERADDWRPGGWQQTAYHRQS-- 330 (426)
T ss_dssp CCEECTTT--------------CEEEEEBTTSEEEEEEECSSCEE--ECCCEESSCTTTGGGTEEECSSSCEEEEGGG--
T ss_pred EeeecCCC--------------CEEEEEeCCCcEEEEeccCCceE--EeeeeeeccccccccccccCCceeeEEcCCC--
Confidence 12334443 34444456788999998654211 111100 011112236888875
Q ss_pred CCcEEEEEe---------CCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCC-EEEEEe-CCCcEEEeEcC
Q 036510 224 PKSTIASAS---------EDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGN-ILAVAD-GNNNVTLWEEA 288 (288)
Q Consensus 224 ~~~~l~s~s---------~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~-~l~s~~-~d~~v~~w~~~ 288 (288)
...+++-. .+++|.+.|....+. ...+ ........++|+|||+ +++++. .+++|.|+|.+
T Consensus 331 -~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv---v~~I-~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 331 -DRIYLLVDQRDEWKHKAASRFVVVLNAETGER---INKI-ELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp -TEEEEEEEECCTTCTTSCEEEEEEEETTTCCE---EEEE-EEEEEECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred -CEEEEEecccccccccCCCCEEEEEECCCCeE---EEEE-ECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence 23444432 135799999865421 1121 1233578899999999 888888 58999999953
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.75 E-value=5.2e-06 Score=70.63 Aligned_cols=193 Identities=10% Similarity=0.027 Sum_probs=107.6
Q ss_pred ccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEec-c-ccCeEEEEecCCCCCCEEEEeeCC----CcEEEe
Q 036510 11 EDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSG-H-KGAVWEVAWAHPKFGSILASCSFD----GTVIIW 84 (288)
Q Consensus 11 ~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~-h-~~~v~~~~~~~~~~~~~l~s~s~d----~~v~iw 84 (288)
...+.++.++++|+++++. .+ .+.+||...+....+..... + ...+++++++++ |+++++...+ +...||
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~--G~l~v~~~~~~~~~~~~~l~ 164 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPS--GALWIGTMGRKAETGAGSIY 164 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTT--SCEEEEEEETTCCTTCEEEE
T ss_pred CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCC--CCEEEEeCCCcCCCCceEEE
Confidence 3568889999999887754 33 48888875433222221111 1 235788999764 7776655422 234555
Q ss_pred ecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeec--CC-CCe--eeEEeeccCCCCeeEEEeCC
Q 036510 85 KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTAR--AD-GGW--DTSRIDQAHPVGVTSVSWAP 159 (288)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~--~~-~~~--~~~~~~~~~~~~v~~i~~~p 159 (288)
.+.+ ... ..+..+....+.++|+|++ ..++++.+.++.|.+|++. .+ ... ..+............+.+++
T Consensus 165 ~~~~-g~~---~~~~~~~~~~~~i~~s~dg-~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~ 239 (326)
T 2ghs_A 165 HVAK-GKV---TKLFADISIPNSICFSPDG-TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA 239 (326)
T ss_dssp EEET-TEE---EEEEEEESSEEEEEECTTS-CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT
T ss_pred EEeC-CcE---EEeeCCCcccCCeEEcCCC-CEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC
Confidence 4433 222 1122223456789999984 2344555667899999985 22 111 11111111223345666666
Q ss_pred CCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEec-CCCCCCCcEEEEEeCC
Q 036510 160 STAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWA-PNLGLPKSTIASASED 234 (288)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~s-p~~~~~~~~l~s~s~D 234 (288)
++ ++.++...++.|.+||. ++. .+..+..+...+.+++|+ |+. ..++++...+
T Consensus 240 ~G--------------~lwva~~~~~~v~~~d~-~g~----~~~~i~~~~~~~~~~af~g~d~---~~L~vt~~~~ 293 (326)
T 2ghs_A 240 EG--------------HIWNARWGEGAVDRYDT-DGN----HIARYEVPGKQTTCPAFIGPDA---SRLLVTSARE 293 (326)
T ss_dssp TS--------------CEEEEEETTTEEEEECT-TCC----EEEEEECSCSBEEEEEEESTTS---CEEEEEEBCT
T ss_pred CC--------------CEEEEEeCCCEEEEECC-CCC----EEEEEECCCCCcEEEEEecCCC---CEEEEEecCC
Confidence 64 55555555678999986 332 223344455568999998 764 2344444444
No 219
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.69 E-value=1.6e-08 Score=87.91 Aligned_cols=179 Identities=13% Similarity=0.135 Sum_probs=90.1
Q ss_pred CCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccC
Q 036510 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAH 148 (288)
Q Consensus 69 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~ 148 (288)
+..+++++.|+.+..||..+++. ...+.. +.+.+..+.++ +.++++++.|+.|+.||.+++...-......
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~---~W~~~~--~~~~s~p~~~~--g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~-- 79 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSI---KWTLKE--DPVLQVPTHVE--EPAFLPDPNDGSLYTLGSKNNEGLTKLPFTI-- 79 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCE---EEEEEC--CCSCCCC-------CCEEECTTTCCEEEC-----CCSEECSCCH--
T ss_pred CCEEEEEcCCCEEEEEECCCCCE---EEEecC--CCceecceEcC--CCEEEEeCCCCEEEEEECCCCceeeeeeccC--
Confidence 67899999999999999988763 333433 34554444444 4456777899999999987654321111000
Q ss_pred CCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEE
Q 036510 149 PVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTI 228 (288)
Q Consensus 149 ~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l 228 (288)
+..+ .-+| .......+++++.|+.+..||..++. .+..+..+. .+.++|+ +..|
T Consensus 80 ~~~~---~~sp-----------~~~~~~~v~~g~~dg~v~a~D~~tG~----~~w~~~~~~----~~~~~p~----~~~v 133 (369)
T 2hz6_A 80 PELV---QASP-----------CRSSDGILYMGKKQDIWYVIDLLTGE----KQQTLSSAF----ADSLSPS----TSLL 133 (369)
T ss_dssp HHHH---TTCS-----------CC-----CCCCEEEEEEEEECCC----------------------------------E
T ss_pred cccc---ccCc-----------eEecCCEEEEEeCCCEEEEEECCCCc----EEEEecCCC----ccccccc----CCEE
Confidence 0000 0011 11012456778889999999998873 333333332 2345664 3578
Q ss_pred EEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCC---CEEEEEeCCCcEEEeEc
Q 036510 229 ASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTG---NILAVADGNNNVTLWEE 287 (288)
Q Consensus 229 ~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg---~~l~s~~~d~~v~~w~~ 287 (288)
++++.|+.|+.||.+..+..+.... ... ....+++++ ..+++++.|+.|+.||.
T Consensus 134 ~~~~~dg~v~a~d~~tG~~~W~~~~-~~~----~~~~~~~~~~~~~~v~~~~~dg~v~a~d~ 190 (369)
T 2hz6_A 134 YLGRTEYTITMYDTKTRELRWNATY-FDY----AASLPEDDVDYKMSHFVSNGDGLVVTVDS 190 (369)
T ss_dssp EEEEEEEEEECCCSSSSSCCCEEEE-EEE----CCBCCCCCTTCCCCEEEEETSCEEEEECT
T ss_pred EEEecCCEEEEEECCCCCEEEeEec-ccc----cCccccCCccccceEEEECCCCEEEEEEC
Confidence 8999999999999876543333221 111 123334432 55677888999998884
No 220
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.68 E-value=1.2e-08 Score=88.70 Aligned_cols=207 Identities=14% Similarity=0.087 Sum_probs=103.8
Q ss_pred CCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecC
Q 036510 22 YGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDH 101 (288)
Q Consensus 22 ~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h 101 (288)
++..+++++.|+.+..||... ++.+.++.. +.+.+..+.. ++.++++++.|+.++.||..+++.. ..+..+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~t--G~~~W~~~~--~~~~s~p~~~--~g~~~v~~s~dg~l~a~d~~tG~~~---w~~~~~ 78 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRT--GSIKWTLKE--DPVLQVPTHV--EEPAFLPDPNDGSLYTLGSKNNEGL---TKLPFT 78 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTT--CCEEEEEEC--CCSCCCC-------CCEEECTTTCCEEEC-----CCS---EECSCC
T ss_pred eCCEEEEEcCCCEEEEEECCC--CCEEEEecC--CCceecceEc--CCCEEEEeCCCCEEEEEECCCCcee---eeeecc
Confidence 467899999999999999754 355655554 3444333332 3668888899999999998766531 122211
Q ss_pred CC-ceeEEEeccCC-CCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeE
Q 036510 102 KS-SVNSIDWAPHE-LGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLC 179 (288)
Q Consensus 102 ~~-~v~~l~~~p~~-~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~ 179 (288)
.. .+.+ +|-- .+..+++|+.|+.|+.||.+++... ... ..+. ...++|.+ ..++
T Consensus 79 ~~~~~~~---sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~--w~~-~~~~----~~~~~p~~--------------~~v~ 134 (369)
T 2hz6_A 79 IPELVQA---SPCRSSDGILYMGKKQDIWYVIDLLTGEKQ--QTL-SSAF----ADSLSPST--------------SLLY 134 (369)
T ss_dssp HHHHHTT---CSCC-----CCCCEEEEEEEEECCC-------------------------------------------EE
T ss_pred Ccccccc---CceEecCCEEEEEeCCCEEEEEECCCCcEE--EEe-cCCC----cccccccC--------------CEEE
Confidence 11 1110 1110 1234667778899999998876432 111 1111 12334432 6688
Q ss_pred EeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeecccc
Q 036510 180 SGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKT 259 (288)
Q Consensus 180 s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~ 259 (288)
.++.|+.|..||..++. .+..+..+. .....+.++... ...+..++.|+.|+.||.+..+..+.. ...+
T Consensus 135 ~~~~dg~v~a~d~~tG~----~~W~~~~~~--~~~~~~~~~~~~-~~~v~~~~~dg~v~a~d~~tG~~~W~~----~~~~ 203 (369)
T 2hz6_A 135 LGRTEYTITMYDTKTRE----LRWNATYFD--YAASLPEDDVDY-KMSHFVSNGDGLVVTVDSESGDVLWIQ----NYAS 203 (369)
T ss_dssp EEEEEEEEECCCSSSSS----CCCEEEEEE--ECCBCCCCCTTC-CCCEEEEETSCEEEEECTTTCCEEEEE----ECSS
T ss_pred EEecCCEEEEEECCCCC----EEEeEeccc--ccCccccCCccc-cceEEEECCCCEEEEEECCCCcEEEEe----cCCC
Confidence 88889999999998773 111111110 111222222111 145778899999999998654322221 2345
Q ss_pred CeEE-EEeecCCCE
Q 036510 260 PVYR-VSWSLTGNI 272 (288)
Q Consensus 260 ~i~~-~~~spdg~~ 272 (288)
++.. ..++++|..
T Consensus 204 pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 204 PVVAFYVWQREGLR 217 (369)
T ss_dssp CEEEEEECTTSSCE
T ss_pred ceEEEEEecCCceE
Confidence 5543 456667754
No 221
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.68 E-value=7e-05 Score=64.96 Aligned_cols=231 Identities=13% Similarity=0.024 Sum_probs=125.9
Q ss_pred EcCCCCEEEEeeC--CC---cEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEee----------CCCcEEE
Q 036510 19 MDYYGKRLATASS--DY---SIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCS----------FDGTVII 83 (288)
Q Consensus 19 ~s~~g~~l~s~~~--d~---~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s----------~d~~v~i 83 (288)
..|+++++..... .. +|.++|... ++.+.++..-..+ .++++++ ++.+..+. .++.|.+
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t--~~~~~~i~~g~~p--~i~~spD--g~~lyv~n~~~~~~~rg~~~~~v~v 101 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGS--GSILGHVNGGFLP--NPVAAHS--GSEFALASTSFSRIAKGKRTDYVEV 101 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCC--CeEEEEecCCCCC--CeEECCC--CCEEEEEeccccccccCCCCCeEEE
Confidence 4578887776653 23 788888753 4556666543333 8999875 77666654 4788999
Q ss_pred eecCCCCceEEeEEeecC-------CCceeEEEeccCCCCeEEEEEeC--CCcEEEEeecCCCCeeeEEeeccCCCCeeE
Q 036510 84 WKEGNSNEWIKDHVFEDH-------KSSVNSIDWAPHELGLCLACGSS--DGNISVFTARADGGWDTSRIDQAHPVGVTS 154 (288)
Q Consensus 84 wd~~~~~~~~~~~~~~~h-------~~~v~~l~~~p~~~~~~l~sg~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 154 (288)
+|..+... ...+... ...-..+.|+|+ ++.|+.+.. ++.|.++| .++.... ... ..+. +
T Consensus 102 iD~~t~~~---~~~i~~~~~~~~~~g~~p~~~~~spD--G~~l~v~n~~~~~~v~viD-~t~~~~~--~~i-~~~~---~ 169 (373)
T 2mad_H 102 FDPVTFLP---IADIELPDAPRFDVGPYSWMNANTPN--NADLLFFQFAAGPAVGLVV-QGGSSDD--QLL-SSPT---C 169 (373)
T ss_pred EECCCCcE---EEEEECCCccccccCCCccceEECCC--CCEEEEEecCCCCeEEEEE-CCCCEEe--EEc-CCCc---e
Confidence 99875442 2222211 122457899998 455555543 57899999 6543211 101 1111 2
Q ss_pred EEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeee---ccccCCcceEEEEecCCCCCCCcEEEEE
Q 036510 155 VSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFP---ALQMHTDWVRDVAWAPNLGLPKSTIASA 231 (288)
Q Consensus 155 i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---~~~~h~~~V~~v~~sp~~~~~~~~l~s~ 231 (288)
+.+.|++. +.+++.+.|+.+..+|. ++... .... .+.+.........|.++. ..++..
T Consensus 170 ~~~~~~~~-------------~~~~~~~~dg~~~~vd~-~g~~~-~~~~~~~~~~~~~p~~~~~~~~~~~----~~~~~~ 230 (373)
T 2mad_H 170 YHIHPGAP-------------STFYLLCAQGGLAKTDH-AGGAA-GAGLVGAMLTAAQNLLTQPAQANKS----GRIVWP 230 (373)
T ss_pred EEEEeCCC-------------ceEEEEcCCCCEEEEEC-CCcEE-EEEeccccccCCcceeecceeEecC----CEEEEE
Confidence 33445442 44666778899999998 65211 0110 011111111223455543 223333
Q ss_pred eCCCcEEEEEeecCCCcccceEee---c----c---ccCeEEEEeecCCCEEEEEeC----------CCcEEEeEc
Q 036510 232 SEDGKVIIWTVAREGDQWEGKVLH---D----F---KTPVYRVSWSLTGNILAVADG----------NNNVTLWEE 287 (288)
Q Consensus 232 s~D~~i~iw~~~~~~~~~~~~~~~---~----~---~~~i~~~~~spdg~~l~s~~~----------d~~v~~w~~ 287 (288)
+..+.+.+.|....... ....+. . . .....-++++|||+++.++.. .+.|.+.|.
T Consensus 231 ~~~~~v~vid~~~~~~~-v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~ 305 (373)
T 2mad_H 231 VYSGKILQADISAAGAT-NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTG 305 (373)
T ss_pred cCCceEEEEeccCCcce-EeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEEC
Confidence 46778888887532110 001110 0 0 112334789999998888754 357888885
No 222
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.66 E-value=2.8e-06 Score=71.48 Aligned_cols=201 Identities=12% Similarity=0.076 Sum_probs=114.6
Q ss_pred eEEEeccccCeEEEEecCCCCCC-EEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCC
Q 036510 48 LAKLSGHKGAVWEVAWAHPKFGS-ILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG 126 (288)
Q Consensus 48 ~~~~~~h~~~v~~~~~~~~~~~~-~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~ 126 (288)
+..+........+..|+++ ++ ++++...++.|..|+. ++. ...+..+...+..+.+.|+ +.++++...++
T Consensus 37 ~~~l~~~~~~~egp~~~~~--g~~l~~~d~~~~~i~~~~~-~g~----~~~~~~~~~~~~gl~~d~d--G~l~v~~~~~~ 107 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEA--QRTLVWSDLVGRRVLGWRE-DGT----VDVLLDATAFTNGNAVDAQ--QRLVHCEHGRR 107 (305)
T ss_dssp CEEEECCCSSEEEEEEEGG--GTEEEEEETTTTEEEEEET-TSC----EEEEEESCSCEEEEEECTT--SCEEEEETTTT
T ss_pred eEEEecCCcCccCCeEeCC--CCEEEEEECCCCEEEEEeC-CCC----EEEEeCCCCccceeeECCC--CCEEEEECCCC
Confidence 4445545556678889764 55 6778888899999987 333 1233345567899999987 56666555567
Q ss_pred cEEEEeecCCCCeeeEE-eeccC-CCCeeEEEeCCCCCCCceecccccCCCceeEE----eec-------------CCcE
Q 036510 127 NISVFTARADGGWDTSR-IDQAH-PVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS----GGC-------------DNTV 187 (288)
Q Consensus 127 ~i~i~d~~~~~~~~~~~-~~~~~-~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s----~~~-------------d~~i 187 (288)
.|..|+.. + ...... ...+. ...+..+.++|++ ++.+| |.. .+.|
T Consensus 108 ~v~~~~~~-g-~~~~~~~~~~~~~~~~~~~i~~d~dG--------------~l~~td~~~g~~~~~~~~~~~~~~~~~~v 171 (305)
T 3dr2_A 108 AITRSDAD-G-QAHLLVGRYAGKRLNSPNDLIVARDG--------------AIWFTDPPFGLRKPSQGCPADPELAHHSV 171 (305)
T ss_dssp EEEEECTT-S-CEEEEECEETTEECSCCCCEEECTTS--------------CEEEECCSGGGSCGGGSCCCCCSSSCEEE
T ss_pred EEEEECCC-C-CEEEEEeccCCCccCCCCCEEECCCC--------------CEEEeCcCCCccccccccccccccCCCeE
Confidence 88888864 2 222111 11111 1235678888876 33443 221 1345
Q ss_pred EEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCC------CcEEEEEeecCCCcccceEeecc-ccC
Q 036510 188 KVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASED------GKVIIWTVAREGDQWEGKVLHDF-KTP 260 (288)
Q Consensus 188 ~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D------~~i~iw~~~~~~~~~~~~~~~~~-~~~ 260 (288)
..+|..++.. +.+ . .....+.++|+|++ +.|..+..+ +.|.+|++.... ......+... ...
T Consensus 172 ~~~d~~~g~~--~~~---~-~~~~p~gl~~spdg----~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~ 240 (305)
T 3dr2_A 172 YRLPPDGSPL--QRM---A-DLDHPNGLAFSPDE----QTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGL 240 (305)
T ss_dssp EEECSSSCCC--EEE---E-EESSEEEEEECTTS----SEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSC
T ss_pred EEEcCCCCcE--EEE---e-cCCCCcceEEcCCC----CEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCC
Confidence 5555444421 111 1 22345789999985 445444443 789999986432 1111222111 223
Q ss_pred eEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 261 VYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 261 i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
...+++.++|++.+ ++.+ .|.+|+
T Consensus 241 pdgi~~d~~G~lwv-~~~~-gv~~~~ 264 (305)
T 3dr2_A 241 PDGFCVDRGGWLWS-SSGT-GVCVFD 264 (305)
T ss_dssp CCSEEECTTSCEEE-CCSS-EEEEEC
T ss_pred CCeEEECCCCCEEE-ecCC-cEEEEC
Confidence 45688999999544 4444 477776
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.56 E-value=7.9e-06 Score=69.95 Aligned_cols=202 Identities=9% Similarity=-0.033 Sum_probs=116.5
Q ss_pred cCeEEEEecCCCCCCEEEEee--CCCcEEEeecCCCCceEEeEEe-------ecCCCceeEEEeccCCCCeEEEEEeC--
Q 036510 56 GAVWEVAWAHPKFGSILASCS--FDGTVIIWKEGNSNEWIKDHVF-------EDHKSSVNSIDWAPHELGLCLACGSS-- 124 (288)
Q Consensus 56 ~~v~~~~~~~~~~~~~l~s~s--~d~~v~iwd~~~~~~~~~~~~~-------~~h~~~v~~l~~~p~~~~~~l~sg~~-- 124 (288)
.....++++++ |++|++.. .++.++||.+.++. ...+ ..|...+.++++.|+ +.++++-..
T Consensus 17 ~~p~~va~~~~--g~~~v~~~~~~~~~~~l~~~~~g~----~~~~p~~~~~~~~~~~~p~gv~~d~~--g~L~v~D~g~~ 88 (343)
T 2qe8_A 17 LAPGNITLTPD--GRLFLSLHQFYQPEMQVAELTQDG----LIPFPPQSGNAIITFDTVLGIKSDGN--GIVWMLDNGNQ 88 (343)
T ss_dssp SCEEEEEECTT--SCEEEEECGGGCCSCSEEEEETTE----EEESCCCCSSCCCCCSCEEEEEECSS--SEEEEEECHHH
T ss_pred CCcceEEECCC--CCEEEEeCCCCCCceEEEEECCCC----eecCCCcccCcccceeEeeEEEEcCC--CcEEEEcCCCC
Confidence 56788999754 88888864 23436677664321 1212 124567899999987 555554433
Q ss_pred ---CCcEEEEeecCCCCeeeEEeec---cCCCCeeEEEeCCCCCCCceecccccCCCceeEEee---cCCcEEEEEEeCC
Q 036510 125 ---DGNISVFTARADGGWDTSRIDQ---AHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGG---CDNTVKVWKLYNG 195 (288)
Q Consensus 125 ---d~~i~i~d~~~~~~~~~~~~~~---~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~---~d~~i~iwd~~~~ 195 (288)
++.|.+||+.++.......... .+......+.++|+. +..+++.. .++.|.+||+.++
T Consensus 89 ~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~-------------g~~yvtd~~~~~~~~i~v~d~~~g 155 (343)
T 2qe8_A 89 SKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIH-------------NFVYISDPAPDDKAALIRVDLQTG 155 (343)
T ss_dssp HTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTT-------------TEEEEEECCSGGGCEEEEEETTTC
T ss_pred cCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCC-------------CEEEEEcCccCCCCeEEEEECCCC
Confidence 5789999987653221111111 112234667776643 13445555 6788999998655
Q ss_pred ceeeeeeeccccC-----------------------------CcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecC-
Q 036510 196 IWKMDCFPALQMH-----------------------------TDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE- 245 (288)
Q Consensus 196 ~~~~~~~~~~~~h-----------------------------~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~- 245 (288)
... ..+.+| ...++.++|+|++ ++|..+..++. ++|.+...
T Consensus 156 ~~~----r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg----~~ly~~~~~~~-~l~~~~~~~ 226 (343)
T 2qe8_A 156 LAA----RVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAEN----EWLYLSPMHST-SMYRIKSAD 226 (343)
T ss_dssp CEE----EECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTS----CEEEEEESSCS-EEEEEEHHH
T ss_pred CEE----EEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCC----CEEEEEeCCCC-eEEEEEHHH
Confidence 211 111111 1236889999974 55666666553 55555321
Q ss_pred -CCc--ccce-----EeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 246 -GDQ--WEGK-----VLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 246 -~~~--~~~~-----~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
... .... ...+.......++++++|.++++...++.|.+||.
T Consensus 227 ~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 227 LSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp HTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred hcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 000 0000 00111224567999999999998888999999985
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.55 E-value=1.1e-05 Score=69.93 Aligned_cols=241 Identities=12% Similarity=-0.001 Sum_probs=123.3
Q ss_pred CEEEEeeCCC----cEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEee----------CCCcEEEeecCCC
Q 036510 24 KRLATASSDY----SIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCS----------FDGTVIIWKEGNS 89 (288)
Q Consensus 24 ~~l~s~~~d~----~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s----------~d~~v~iwd~~~~ 89 (288)
+.+++...++ +|.+.|.+ +.+.+.++..-..+ .+.++++ ++++..+. .+++|.+||..+.
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~--t~~v~~~i~vG~~P--~i~~spD--g~~lyVan~~~~r~~~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAG--CGVTLGHSLGAFLS--LAVAGHS--GSDFALASTSFARSAKGKRTDYVEVFDPVTF 106 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETT--TTEEEEEEEECTTC--EEEECTT--SSCEEEEEEEETTTTSSSEEEEEEEECTTTC
T ss_pred eEEEECCccCCccceEEEEECC--CCeEEEEEeCCCCC--ceEECCC--CCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 3455555555 77788874 44667777544455 7999875 55555543 4789999999876
Q ss_pred CceEEeEEeecC-------CCceeEEEeccCCCCeEEEEEeC--CCcEEE--EeecCCCCeeeEEee-------cc----
Q 036510 90 NEWIKDHVFEDH-------KSSVNSIDWAPHELGLCLACGSS--DGNISV--FTARADGGWDTSRID-------QA---- 147 (288)
Q Consensus 90 ~~~~~~~~~~~h-------~~~v~~l~~~p~~~~~~l~sg~~--d~~i~i--~d~~~~~~~~~~~~~-------~~---- 147 (288)
.. ...+..+ ......+.++|+ +++++.+.. ++.+.+ +|+.+ ....... .+
T Consensus 107 ~v---v~~I~v~~~~~~~~g~~P~~ia~SpD--Gk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~ 178 (368)
T 1mda_H 107 LP---IADIELPDAPRFSVGPRVHIIGNCAS--SACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATH 178 (368)
T ss_dssp CE---EEEEEETTSCSCCBSCCTTSEEECTT--SSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEE
T ss_pred CE---EEEEECCCccccccCCCcceEEEcCC--CCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEE
Confidence 52 3344322 123567899998 444454442 467888 88754 1110000 00
Q ss_pred ----CCCCeeEEEeCC----CCCCC----ceeccc----ccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccc-----
Q 036510 148 ----HPVGVTSVSWAP----STAPG----ALVGSG----FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQ----- 206 (288)
Q Consensus 148 ----~~~~v~~i~~~p----~~~~~----~~~~~~----~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----- 206 (288)
-...+..+.... ++... ..+..+ ...++..++-.+. +.+.+.|...+.. +.+..+.
T Consensus 179 ~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~--~v~~~~~~~~~~ 255 (368)
T 1mda_H 179 YLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGA--TMKAAIDGNESG 255 (368)
T ss_dssp ECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCC--EEECCCCSSCTH
T ss_pred EEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcc--eEEEEEEecccc
Confidence 011111222211 00000 000000 0112223333334 7788888754321 1111110
Q ss_pred --cC---CcceEEEEecCCCCCCCcEEEEEe---C-----CCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCE-
Q 036510 207 --MH---TDWVRDVAWAPNLGLPKSTIASAS---E-----DGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNI- 272 (288)
Q Consensus 207 --~h---~~~V~~v~~sp~~~~~~~~l~s~s---~-----D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~- 272 (288)
.+ ......+.|+|++ ...+++.. . ++.+.++|+...+. ...+ ..+.....++|+|||++
T Consensus 256 ~~~~~~~p~g~~~v~~s~dg---~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v---v~~i-~vg~~p~gi~~s~Dg~~l 328 (368)
T 1mda_H 256 RKADNFRSAGFQMVAKLKNT---DGIMILTVEHSRSCLAAAENTSSVTASVGQT---SGPI-SNGHDSDAIIAAQDGASD 328 (368)
T ss_dssp HHHTTEEECSSSCEEEETTT---TEEEEEEEECSSCTTSCEEEEEEEESSSCCE---EECC-EEEEEECEEEECCSSSCE
T ss_pred ccccccccCcceeeEEcCCC---CEEEEEeccccCcccccCCCEEEEECCCCeE---EEEE-ECCCCcceEEECCCCCEE
Confidence 00 1111226799985 23454433 2 24566999875421 1111 11235788999999985
Q ss_pred EEEEe-CCCcEEEeEcC
Q 036510 273 LAVAD-GNNNVTLWEEA 288 (288)
Q Consensus 273 l~s~~-~d~~v~~w~~~ 288 (288)
+++.. .+++|.++|.+
T Consensus 329 ~va~~~~~~~VsVID~~ 345 (368)
T 1mda_H 329 NYANSAGTEVLDIYDAA 345 (368)
T ss_dssp EEEEETTTTEEEEEESS
T ss_pred EEEccCCCCeEEEEECC
Confidence 55555 58999999964
No 225
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.34 E-value=0.00016 Score=62.77 Aligned_cols=233 Identities=10% Similarity=0.027 Sum_probs=127.1
Q ss_pred EEcCCCCEEEEeeC-----CCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEee----------CCCcEE
Q 036510 18 AMDYYGKRLATASS-----DYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCS----------FDGTVI 82 (288)
Q Consensus 18 ~~s~~g~~l~s~~~-----d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s----------~d~~v~ 82 (288)
...|+++.+..... +++|.+.|.. +.+.+.++..-..+ . ++++++ |+++..+. .++.|.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~--t~~v~~~I~vG~~P-~-va~spD--G~~lyVan~~~~r~~~G~~~~~Vs 112 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGE--AGRVIGMIDGGFLP-N-PVVADD--GSFIAHASTVFSRIARGERTDYVE 112 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETT--TTEEEEEEEECSSC-E-EEECTT--SSCEEEEEEEEEETTEEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECC--CCeEEEEEECCCCC-c-EEECCC--CCEEEEEcccccccccCCCCCEEE
Confidence 35689988777765 6788888874 44667776644444 3 899875 66665443 467899
Q ss_pred EeecCCCCceEEeEEeecC-------CCceeEEEeccCCCCeEEEEEe--CCCcEEEEeecCCCCeeeEEeeccCCCCee
Q 036510 83 IWKEGNSNEWIKDHVFEDH-------KSSVNSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVT 153 (288)
Q Consensus 83 iwd~~~~~~~~~~~~~~~h-------~~~v~~l~~~p~~~~~~l~sg~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~ 153 (288)
+||..+... ...+... ...-..+.|+|++ +.+..+. .++.|.++|+.+...... + .. +. +
T Consensus 113 viD~~t~~v---~~~I~v~~g~r~~~g~~P~~~a~spDG--k~lyVan~~~~~~VsVID~~t~~vv~t--I-~v-~g--~ 181 (386)
T 3sjl_D 113 VFDPVTLLP---TADIELPDAPRFLVGTYPWMTSLTPDG--KTLLFYQFSPAPAVGVVDLEGKAFKRM--L-DV-PD--C 181 (386)
T ss_dssp EECTTTCCE---EEEEEETTCCCCCBSCCGGGEEECTTS--SEEEEEECSSSCEEEEEETTTTEEEEE--E-EC-CS--E
T ss_pred EEECCCCeE---EEEEECCCccccccCCCCceEEEcCCC--CEEEEEEcCCCCeEEEEECCCCcEEEE--E-EC-CC--c
Confidence 999977552 2233211 1235678999984 4444443 378999999986532211 1 10 11 1
Q ss_pred EEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeC-CceeeeeeeccccCCcceE-EEEec-CCCCCCCcEEEE
Q 036510 154 SVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIWKMDCFPALQMHTDWVR-DVAWA-PNLGLPKSTIAS 230 (288)
Q Consensus 154 ~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~h~~~V~-~v~~s-p~~~~~~~~l~s 230 (288)
.-..|.+ .+.+++.+.|+.+-+.++.. +.........+..-..++. ...|. ++ ..++-
T Consensus 182 -~~~~P~g-------------~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~d-----G~~~~ 242 (386)
T 3sjl_D 182 -YHIFPTA-------------PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKA-----GRLVW 242 (386)
T ss_dssp -EEEEEEE-------------TTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTT-----TEEEE
T ss_pred -ceeecCC-------------CceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCC-----CcEEE
Confidence 1112322 14566777788888888765 3211000000110111111 12443 33 24545
Q ss_pred EeCCCcEEEEEeecCCCcccceEee---------cc-ccCeEEEEeecCCCEEEEEeC----------CCcEEEeEc
Q 036510 231 ASEDGKVIIWTVAREGDQWEGKVLH---------DF-KTPVYRVSWSLTGNILAVADG----------NNNVTLWEE 287 (288)
Q Consensus 231 ~s~D~~i~iw~~~~~~~~~~~~~~~---------~~-~~~i~~~~~spdg~~l~s~~~----------d~~v~~w~~ 287 (288)
.+.+++|.+.|....... ....+. +. ....-.++++|+++++.++.. .++|-+.|.
T Consensus 243 vs~~g~V~v~d~~~~~~~-v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~ 318 (386)
T 3sjl_D 243 PTYTGKIHQIDLSSGDAK-FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDA 318 (386)
T ss_dssp EBTTSEEEEEECTTSSCE-ECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred EeCCCEEEEEECCCCcce-eecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEEC
Confidence 777899999998643210 011111 00 011224777999999888753 246777774
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.23 E-value=0.00014 Score=64.08 Aligned_cols=191 Identities=15% Similarity=0.192 Sum_probs=106.2
Q ss_pred CEEEEeeCCCcEEEeecCCC-CceEEeEEee------c-CCCceeEEEeccCCCCeEEEEEeCC------CcEEEEeecC
Q 036510 70 SILASCSFDGTVIIWKEGNS-NEWIKDHVFE------D-HKSSVNSIDWAPHELGLCLACGSSD------GNISVFTARA 135 (288)
Q Consensus 70 ~~l~s~s~d~~v~iwd~~~~-~~~~~~~~~~------~-h~~~v~~l~~~p~~~~~~l~sg~~d------~~i~i~d~~~ 135 (288)
.+++++-.+++|.+.|..+. ......+++. . ....-..+...|+ + +++++..+ +.|.++|..+
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pd--G-i~Vs~~g~~~g~~~g~v~vlD~~T 173 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPD--A-IYISALGNEEGEGPGGILMLDHYS 173 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSS--C-EEEEEEEETTSCSCCEEEEECTTT
T ss_pred EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCC--e-EEEEcCCCcCCCCCCeEEEEECCC
Confidence 45567888999999998633 2222334441 0 0112233455676 4 44444333 6788998876
Q ss_pred CCCeeeEEeeccCC-CCeeEEEeCCCCCCCceecccccCCCceeEEee-------------------cCCcEEEEEEeCC
Q 036510 136 DGGWDTSRIDQAHP-VGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGG-------------------CDNTVKVWKLYNG 195 (288)
Q Consensus 136 ~~~~~~~~~~~~~~-~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~-------------------~d~~i~iwd~~~~ 195 (288)
.......... ..+ .--..+-|+|+. +.++++. .+++|.+||+.++
T Consensus 174 ~~v~~~~~~~-~~~~~~~Yd~~~~p~~--------------~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 174 FEPLGKWEID-RGDQYLAYDFWWNLPN--------------EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp CCEEEECCSB-CTTCCCCCCEEEETTT--------------TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred CeEEEEEccC-CCCccccceEEECCCC--------------CEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 5322211111 111 112346667775 5666664 4688999999875
Q ss_pred ceeeeeeeccccC--CcceEEEEe--cCCCCCCCcEEEEEe-----CCCcEEEEEeecCCCcccc-eEe--e--------
Q 036510 196 IWKMDCFPALQMH--TDWVRDVAW--APNLGLPKSTIASAS-----EDGKVIIWTVAREGDQWEG-KVL--H-------- 255 (288)
Q Consensus 196 ~~~~~~~~~~~~h--~~~V~~v~~--sp~~~~~~~~l~s~s-----~D~~i~iw~~~~~~~~~~~-~~~--~-------- 255 (288)
+.+..+... ...-..+.| +|++. ...++.- .+++|.+|.... + .+.. ..+ .
T Consensus 239 ----k~~~tI~vg~~g~~P~~i~f~~~Pdg~---~aYV~~e~~~~~Lss~V~v~~~d~-g-~~~~~~vIdi~~~~v~~~l 309 (462)
T 2ece_A 239 ----KRIHSLTLGEENRMALELRPLHDPTKL---MGFINMVVSLKDLSSSIWLWFYED-G-KWNAEKVIEIPAEPLEGNL 309 (462)
T ss_dssp ----EEEEEEESCTTEEEEEEEEECSSTTCC---EEEEEEEEETTTCCEEEEEEEEET-T-EEEEEEEEEECCEECCSSC
T ss_pred ----cEeeEEecCCCCCccceeEeeECCCCC---EEEEEEeeeccCCCceEEEEEecC-C-ceeEEEEEeCCCccccccc
Confidence 222333221 112345555 88852 3445555 677888776653 1 1111 111 0
Q ss_pred -----cc---ccCeEEEEeecCCCEEEEEeC-CCcEEEeEc
Q 036510 256 -----DF---KTPVYRVSWSLTGNILAVADG-NNNVTLWEE 287 (288)
Q Consensus 256 -----~~---~~~i~~~~~spdg~~l~s~~~-d~~v~~w~~ 287 (288)
++ .+....+.+||||++|.++.. .+.|.++|+
T Consensus 310 p~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV 350 (462)
T 2ece_A 310 PEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDI 350 (462)
T ss_dssp CGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEEC
T ss_pred cccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 00 134678999999999988864 689999985
No 227
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.22 E-value=0.00074 Score=55.49 Aligned_cols=201 Identities=6% Similarity=0.001 Sum_probs=118.4
Q ss_pred ceEEEEEcCCCCEEEEeeC--CCcEEEEEeCCCCceeeEEEec-cccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCC
Q 036510 13 TVHDVAMDYYGKRLATASS--DYSIKIIGVGNNTSQHLAKLSG-HKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNS 89 (288)
Q Consensus 13 ~v~~~~~s~~g~~l~s~~~--d~~i~lwd~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~ 89 (288)
...++.|+++|+++++.+. +++|++.|...+ +.+..+.- .....-.+++. .+.+.++.-.++.+.++|..+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg--~v~~~i~l~~~~fgeGi~~~---g~~lyv~t~~~~~v~viD~~t~ 96 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTG--KVENIHKMDDSYFGEGLTLL---NEKLYQVVWLKNIGFIYDRRTL 96 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTC--CEEEEEECCTTCCEEEEEEE---TTEEEEEETTCSEEEEEETTTT
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCC--CEEEEEecCCCcceEEEEEe---CCEEEEEEecCCEEEEEECCCC
Confidence 4578999998876666653 578999998543 45555431 11222345654 2466677778999999998765
Q ss_pred CceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeec-cCC-CCeeEEEeCCCCCCCcee
Q 036510 90 NEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQ-AHP-VGVTSVSWAPSTAPGALV 167 (288)
Q Consensus 90 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~-~~~-~~v~~i~~~p~~~~~~~~ 167 (288)
. ...+++.....-+.+ ++++ ..+++ +..+++|.++|..+........... +.+ .....+.|. ++
T Consensus 97 ~---v~~~i~~g~~~g~gl--t~Dg-~~l~v-s~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg------ 162 (266)
T 2iwa_A 97 S---NIKNFTHQMKDGWGL--ATDG-KILYG-SDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG------ 162 (266)
T ss_dssp E---EEEEEECCSSSCCEE--EECS-SSEEE-ECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT------
T ss_pred c---EEEEEECCCCCeEEE--EECC-CEEEE-ECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC------
Confidence 4 333443211222344 4553 34444 4468899999987643222211111 111 123445544 22
Q ss_pred cccccCCCceeEEeecCCcEEEEEEeCCceeeeeeecccc---------C--CcceEEEEecCCCCCCCcEEEEEeCCCc
Q 036510 168 GSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQM---------H--TDWVRDVAWAPNLGLPKSTIASASEDGK 236 (288)
Q Consensus 168 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~---------h--~~~V~~v~~sp~~~~~~~~l~s~s~D~~ 236 (288)
.+.+....++.|.+.|..++... ..+. +.+ + ....+.++|+|+. ...++++....+
T Consensus 163 --------~lyvn~~~~~~V~vID~~tg~V~-~~I~-~~g~~~~~~~~~~~~~~v~nGIa~~~~~---~~lfVTgk~~~~ 229 (266)
T 2iwa_A 163 --------EVWANIWQTDCIARISAKDGTLL-GWIL-LPNLRKKLIDEGFRDIDVLNGIAWDQEN---KRIFVTGKLWPK 229 (266)
T ss_dssp --------EEEEEETTSSEEEEEETTTCCEE-EEEE-CHHHHHHHHHTTCTTCCCEEEEEEETTT---TEEEEEETTCSE
T ss_pred --------EEEEecCCCCeEEEEECCCCcEE-EEEE-CCCcccccccccccccCceEEEEEcCCC---CEEEEECCCCCe
Confidence 44555556788999998876321 1111 111 1 1245889999985 468899988999
Q ss_pred EEEEEeecC
Q 036510 237 VIIWTVARE 245 (288)
Q Consensus 237 i~iw~~~~~ 245 (288)
+..-++...
T Consensus 230 v~~i~l~~~ 238 (266)
T 2iwa_A 230 LFEIKLHLV 238 (266)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEecc
Confidence 999888753
No 228
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.17 E-value=0.00041 Score=61.12 Aligned_cols=231 Identities=11% Similarity=0.027 Sum_probs=121.8
Q ss_pred CCCCEEEEeeC-C----CcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEee----------CCCcEEEee
Q 036510 21 YYGKRLATASS-D----YSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCS----------FDGTVIIWK 85 (288)
Q Consensus 21 ~~g~~l~s~~~-d----~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s----------~d~~v~iwd 85 (288)
+++++++.... + ++|.+.|.. +.+.+.++.--..+ .+.++++ ++.+..+. .++.|.++|
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~--t~~vv~~I~vG~~P--gia~SpD--gk~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGS--TGRILGMTDGGFLP--HPVAAED--GSFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETT--TTEEEEEEEECSSC--EEEECTT--SSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECC--CCEEEEEEECCCCC--ceEECCC--CCEEEEEeccccccccCCCCCEEEEEE
Confidence 46666555444 3 689998875 34666666543444 7999875 66555443 477999999
Q ss_pred cCCCCceEEeEEeecC-------CCceeEEEeccCCCCeEEEEEe--CCCcEEEEeecCCCCeeeEEeeccCCCCeeEEE
Q 036510 86 EGNSNEWIKDHVFEDH-------KSSVNSIDWAPHELGLCLACGS--SDGNISVFTARADGGWDTSRIDQAHPVGVTSVS 156 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h-------~~~v~~l~~~p~~~~~~l~sg~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 156 (288)
..+... ...+... ......+.|+|+ ++.+..+. .++.|.+.|+.+......... +. . ..
T Consensus 156 ~~t~~v---v~~I~v~g~~r~~~g~~P~~~~~spD--Gk~lyV~n~~~~~~VsVID~~t~kvv~~I~v----~g-~--~~ 223 (426)
T 3c75_H 156 PVTFLP---IADIELPDAPRFLVGTYQWMNALTPD--NKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV----PD-C--YH 223 (426)
T ss_dssp TTTCCE---EEEEEETTCCCCCBSCCGGGSEECTT--SSEEEEEECSSSCEEEEEETTTTEEEEEEEC----CS-E--EE
T ss_pred CCCCcE---EEEEECCCccccccCCCcceEEEcCC--CCEEEEEecCCCCeEEEEECCCCeEEEEEEc----CC-c--ee
Confidence 877652 2223211 123457789998 44455544 268899999876532111111 00 0 11
Q ss_pred eCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcc-eEEEEecCCCCCCCcEEEEEeCCC
Q 036510 157 WAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDW-VRDVAWAPNLGLPKSTIASASEDG 235 (288)
Q Consensus 157 ~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~-V~~v~~sp~~~~~~~~l~s~s~D~ 235 (288)
..|++. ..+++.+.|+.+.+.+...+.........+.....+ ...+.|.++. ..++..+..+
T Consensus 224 ~~p~g~-------------~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg----~~~~~~s~~g 286 (426)
T 3c75_H 224 IFPASP-------------TVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS----GRLVWPTYTG 286 (426)
T ss_dssp EEEEET-------------TEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT----CEEEEEBTTS
T ss_pred eccCCC-------------cEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC----CEEEEEeCCC
Confidence 122221 345556667777777763331110000111111111 1123566763 3455556778
Q ss_pred cEEEEEeecCCCcccceEee-------cc---ccCeEEEEeecCCCEEEEEeC----------CCcEEEeEc
Q 036510 236 KVIIWTVAREGDQWEGKVLH-------DF---KTPVYRVSWSLTGNILAVADG----------NNNVTLWEE 287 (288)
Q Consensus 236 ~i~iw~~~~~~~~~~~~~~~-------~~---~~~i~~~~~spdg~~l~s~~~----------d~~v~~w~~ 287 (288)
++.+.|....... ...... .. ......++|+|||+++.++.. .++|.+.|.
T Consensus 287 ~V~ViD~~~~~~~-v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~ 357 (426)
T 3c75_H 287 KIFQADLTAEGAT-FRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNA 357 (426)
T ss_dssp EEEEEEECSSCEE-ECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred cEEEEeccCCceE-EeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEEC
Confidence 8999988542100 000000 00 011123689999998777743 357888885
No 229
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.09 E-value=0.0014 Score=53.44 Aligned_cols=193 Identities=9% Similarity=0.038 Sum_probs=106.0
Q ss_pred eEEEeccccCe--EEEEecCCCCCCEEEEeeCCC--cEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEe
Q 036510 48 LAKLSGHKGAV--WEVAWAHPKFGSILASCSFDG--TVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS 123 (288)
Q Consensus 48 ~~~~~~h~~~v--~~~~~~~~~~~~~l~s~s~d~--~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~ 123 (288)
+.++ .|.... ..|.|+ + +.++.|.+.+| +|+.+|+.+++. ...+... .........+++ ..+.+..-
T Consensus 34 v~~~-phd~~~ftqGL~~~-~--~~LyestG~~g~S~v~~vD~~Tgkv---~~~~~l~-~~~FgeGit~~g-~~ly~ltw 104 (262)
T 3nol_A 34 VHSY-PHDTKAFTEGFFYR-N--GYFYESTGLNGRSSIRKVDIESGKT---LQQIELG-KRYFGEGISDWK-DKIVGLTW 104 (262)
T ss_dssp EEEE-ECCTTCEEEEEEEE-T--TEEEEEEEETTEEEEEEECTTTCCE---EEEEECC-TTCCEEEEEEET-TEEEEEES
T ss_pred EEEe-cCCCCcccceEEEE-C--CEEEEECCCCCCceEEEEECCCCcE---EEEEecC-CccceeEEEEeC-CEEEEEEe
Confidence 4444 455443 778886 3 67888888877 999999987763 2223222 223332222332 34455555
Q ss_pred CCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeee
Q 036510 124 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFP 203 (288)
Q Consensus 124 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 203 (288)
.++.+.+||..+...... +...+.+ .++..+++.|+.+..++.|.++|..+.... ..+.
T Consensus 105 ~~~~v~v~D~~t~~~~~t-------------i~~~~eG-------~glt~dg~~L~~SdGs~~i~~iDp~T~~v~-~~I~ 163 (262)
T 3nol_A 105 KNGLGFVWNIRNLRQVRS-------------FNYDGEG-------WGLTHNDQYLIMSDGTPVLRFLDPESLTPV-RTIT 163 (262)
T ss_dssp SSSEEEEEETTTCCEEEE-------------EECSSCC-------CCEEECSSCEEECCSSSEEEEECTTTCSEE-EEEE
T ss_pred eCCEEEEEECccCcEEEE-------------EECCCCc-------eEEecCCCEEEEECCCCeEEEEcCCCCeEE-EEEE
Confidence 688999999876432221 1111111 111222355665555778999987664211 1111
Q ss_pred c-cccCC-cceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEee------------ccccCeEEEEeecC
Q 036510 204 A-LQMHT-DWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLH------------DFKTPVYRVSWSLT 269 (288)
Q Consensus 204 ~-~~~h~-~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~------------~~~~~i~~~~~spd 269 (288)
. ..+.. ..++.+.|. + +...|..-.++.|.+.|+++.+.. ..+. ......+.++|+|+
T Consensus 164 V~~~g~~~~~lNELe~~-~----G~lyan~w~~~~I~vIDp~tG~V~---~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~ 235 (262)
T 3nol_A 164 VTAHGEELPELNELEWV-D----GEIFANVWQTNKIVRIDPETGKVT---GIIDLNGILAEAGPLPSPIDVLNGIAWDKE 235 (262)
T ss_dssp CEETTEECCCEEEEEEE-T----TEEEEEETTSSEEEEECTTTCBEE---EEEECTTGGGGSCSCCSSCCCEEEEEEETT
T ss_pred eccCCccccccceeEEE-C----CEEEEEEccCCeEEEEECCCCcEE---EEEECCcCccccccccCcCCceEEEEEcCC
Confidence 1 11111 235667776 3 345555556778888887654211 1111 11235689999999
Q ss_pred CCEEEEEeC
Q 036510 270 GNILAVADG 278 (288)
Q Consensus 270 g~~l~s~~~ 278 (288)
++.|.+.+.
T Consensus 236 ~~~lfVTGK 244 (262)
T 3nol_A 236 HHRLFVTGK 244 (262)
T ss_dssp TTEEEEEET
T ss_pred CCEEEEECC
Confidence 988777764
No 230
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.02 E-value=0.00031 Score=65.48 Aligned_cols=115 Identities=12% Similarity=0.106 Sum_probs=68.8
Q ss_pred EEEEcC-CCCEEEEeeCCC-----------cEEEEEeCCCCceeeEEEec-cccCeEEEEecCCCCCCEEEEee-CCCcE
Q 036510 16 DVAMDY-YGKRLATASSDY-----------SIKIIGVGNNTSQHLAKLSG-HKGAVWEVAWAHPKFGSILASCS-FDGTV 81 (288)
Q Consensus 16 ~~~~s~-~g~~l~s~~~d~-----------~i~lwd~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~s-~d~~v 81 (288)
.+++.+ +|+.++.|+.+. .+.+||........+..+.. +.....++++.. ++.+++.|+ .+..+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~--~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDG--NGQIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECT--TSCEEEECSSSTTCE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCC--CCCEEEeCCCCCCce
Confidence 445666 888888888653 57788876555444444432 222223455544 378888888 45689
Q ss_pred EEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEe-CC-----CcEEEEeecCC
Q 036510 82 IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS-SD-----GNISVFTARAD 136 (288)
Q Consensus 82 ~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~-~d-----~~i~i~d~~~~ 136 (288)
.+||..+. .|.....+...+ .-.++...++ +++++.|+ .+ +.+.+||..++
T Consensus 268 ~~yd~~t~-~W~~~~~~~~~R-~~~s~~~~~d--g~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 268 SLYDSSSD-SWIPGPDMQVAR-GYQSSATMSD--GRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEEEGGGT-EEEECCCCSSCC-SSCEEEECTT--SCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred EEecCcCC-ceeECCCCCccc-cccceEEecC--CeEEEEeCcccCCcccccceEeCCCCC
Confidence 99998753 454433332222 1234444455 56777777 44 56888998653
No 231
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.01 E-value=0.0005 Score=64.38 Aligned_cols=49 Identities=12% Similarity=0.409 Sum_probs=34.3
Q ss_pred CcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 235 GKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 235 ~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
+.|..||+...+..+.. .+..++....+..+|..+++++.|+.+++||.
T Consensus 457 g~l~A~D~~tG~~~W~~----~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~ 505 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSV----EHVSPWNGGTLTTAGNVVFQGTADGRLVAYHA 505 (677)
T ss_dssp EEEEEEETTTTEEEEEE----EESSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred cEEEEEeCCCCcEEeec----CCCCCCcCcceEeCCCEEEEECCCCcEEEEEC
Confidence 67888987654322221 22344555667788889999999999999995
No 232
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.01 E-value=0.00021 Score=61.82 Aligned_cols=69 Identities=12% Similarity=0.003 Sum_probs=48.3
Q ss_pred EEEEcCCCCEEEEee----------CCCcEEEEEeCCCCceeeEEEecc-------ccCeEEEEecCCCCCCEEEEeeC-
Q 036510 16 DVAMDYYGKRLATAS----------SDYSIKIIGVGNNTSQHLAKLSGH-------KGAVWEVAWAHPKFGSILASCSF- 77 (288)
Q Consensus 16 ~~~~s~~g~~l~s~~----------~d~~i~lwd~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~~l~s~s~- 77 (288)
.+.|+|||++|..+. .+++|.++|... .+.+.++.-+ ...-..++++++ |+++..+..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T--~~vv~~I~v~~~~~~~~g~~P~~ia~SpD--Gk~lyVan~~ 144 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT--FLPIADIELPDAPRFSVGPRVHIIGNCAS--SACLLFFLFG 144 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT--CCEEEEEEETTSCSCCBSCCTTSEEECTT--SSCEEEEECS
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCC--CCEEEEEECCCccccccCCCcceEEEcCC--CCEEEEEccC
Confidence 689999998888776 368899999853 3556666432 012356888875 777776654
Q ss_pred -CCcEEE--eecCC
Q 036510 78 -DGTVII--WKEGN 88 (288)
Q Consensus 78 -d~~v~i--wd~~~ 88 (288)
+..+.+ +|..+
T Consensus 145 ~~~~v~V~~iD~~t 158 (368)
T 1mda_H 145 SSAAAGLSVPGASD 158 (368)
T ss_dssp SSCEEEEEETTTEE
T ss_pred CCCeEEEEEEchhh
Confidence 467888 88754
No 233
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.97 E-value=0.00064 Score=63.80 Aligned_cols=50 Identities=22% Similarity=0.437 Sum_probs=34.0
Q ss_pred CCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 234 DGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 234 D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
++.|+.||+...+..+.. .+..+...-.++..|..+.+|+.|+.|+.||.
T Consensus 454 ~g~l~A~D~~tG~~~W~~----~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~ 503 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEV----PYVTIFNGGTLSTAGNLVFEGSADGRVIAYAA 503 (689)
T ss_dssp EEEEEEEETTTTEEEEEE----EESSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred ceeEEEEECCCCCeEeEc----cCCCCccCccceECCCEEEEECCCCcEEEEEC
Confidence 477888988654322221 12234444567778889999999999999994
No 234
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.96 E-value=0.0019 Score=61.16 Aligned_cols=119 Identities=18% Similarity=0.172 Sum_probs=65.8
Q ss_pred cccc-ceEEEEEc-CCCCEEEEe-eCC----CcEEEEEeCCC-CceeeEEEeccccCeEEEEecCCCCCCEEEEeeCC--
Q 036510 9 GHED-TVHDVAMD-YYGKRLATA-SSD----YSIKIIGVGNN-TSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFD-- 78 (288)
Q Consensus 9 ~h~~-~v~~~~~s-~~g~~l~s~-~~d----~~i~lwd~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d-- 78 (288)
+|+- .+...+|| |||++||=+ +.+ .+|+++|++.+ .. ....+.. ....++|+++ ++.|+..+.|
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~-l~~~~~~---~~~~~~WspD--g~~l~y~~~d~~ 243 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT-IADKVSG---TNGEIVWGPD--HTSLFYVTKDET 243 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC-CCCCEEE---ECSCCEECSS--TTEEEEEEECTT
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe-CCccccC---ceeeEEEecC--CCEEEEEEECCC
Confidence 4443 67788999 999987633 222 35888898654 21 1111211 1245789865 7777766665
Q ss_pred ---CcEEEeecCCCCceEEeEEee-cCCCceeEEEeccCCCCeEEEEEe---CCCcEEEEeecCC
Q 036510 79 ---GTVIIWKEGNSNEWIKDHVFE-DHKSSVNSIDWAPHELGLCLACGS---SDGNISVFTARAD 136 (288)
Q Consensus 79 ---~~v~iwd~~~~~~~~~~~~~~-~h~~~v~~l~~~p~~~~~~l~sg~---~d~~i~i~d~~~~ 136 (288)
..|.++++.++... ....+. ........+.|+|++ +.|+... ....|.++|+..+
T Consensus 244 ~~~~~v~~~~lgt~~~~-~~lv~~~~~~~~~~~~~~SpDg--~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 244 LRENKVWRHVMGKLQSE-DVCLYEEHNPLFSAFMYKAADT--NTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp CCEEEEEEEETTSCGGG-CEEEEECCCTTCEEEEEECTTS--SEEEEEEECSSCEEEEEEESSSC
T ss_pred CCCCEEEEEECCCCchh-cEEEEecCCCceEEEEEECCCC--CEEEEEecCCCCceEEEEECCCC
Confidence 25667777554211 111222 222345678999984 4444332 2335667777653
No 235
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.95 E-value=0.0025 Score=54.64 Aligned_cols=179 Identities=8% Similarity=-0.008 Sum_probs=92.7
Q ss_pred CEEEEeeCCCcEEEeecCCCCceEEeEEeecCC--Cc--eeE---EEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeE
Q 036510 70 SILASCSFDGTVIIWKEGNSNEWIKDHVFEDHK--SS--VNS---IDWAPHELGLCLACGSSDGNISVFTARADGGWDTS 142 (288)
Q Consensus 70 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~--~~--v~~---l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~ 142 (288)
..+..++.++.+..+|..++.. ........ .. +.. +.-.|.-.+..+..++.++.+..+|.+++.. ..
T Consensus 189 ~~v~~g~~~g~l~~~d~~tG~~---~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~--~w 263 (376)
T 3q7m_A 189 GAAVVGGDNGRVSAVLMEQGQM---IWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQI--MW 263 (376)
T ss_dssp TEEEECCTTTEEEEEETTTCCE---EEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCE--EE
T ss_pred CEEEEEcCCCEEEEEECCCCcE---EEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcE--Ee
Confidence 4667778889999999877652 22222110 00 000 1011110123466677888999999876532 11
Q ss_pred EeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccc-cCCcceEEEEecCCC
Q 036510 143 RIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQ-MHTDWVRDVAWAPNL 221 (288)
Q Consensus 143 ~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~h~~~V~~v~~sp~~ 221 (288)
... ......+... ...++.++.++.+..+|..++.. ..... .....+......
T Consensus 264 ~~~---~~~~~~~~~~----------------~~~l~~~~~~g~l~~~d~~tG~~----~w~~~~~~~~~~~~~~~~--- 317 (376)
T 3q7m_A 264 KRE---LGSVNDFIVD----------------GNRIYLVDQNDRVMALTIDGGVT----LWTQSDLLHRLLTSPVLY--- 317 (376)
T ss_dssp EEC---CCCEEEEEEE----------------TTEEEEEETTCCEEEEETTTCCE----EEEECTTTTSCCCCCEEE---
T ss_pred ecc---CCCCCCceEE----------------CCEEEEEcCCCeEEEEECCCCcE----EEeecccCCCcccCCEEE---
Confidence 111 1112222211 24567777888999999887732 11111 111111111221
Q ss_pred CCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 222 GLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 222 ~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
+..|..++.++.|..+|.+..+..+.. ......+.+.-. ..+..|++++.+|.|..|+
T Consensus 318 ---~~~l~v~~~~g~l~~~d~~tG~~~~~~---~~~~~~~~~~~~-~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 318 ---NGNLVVGDSEGYLHWINVEDGRFVAQQ---KVDSSGFQTEPV-AADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp ---TTEEEEECTTSEEEEEETTTCCEEEEE---ECCTTCBCSCCE-EETTEEEEEBTTSCEEEEE
T ss_pred ---CCEEEEEeCCCeEEEEECCCCcEEEEE---ecCCCcceeCCE-EECCEEEEEeCCCEEEEEe
Confidence 246888999999999997654321111 111122211100 1356778889999999987
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.92 E-value=0.0011 Score=55.58 Aligned_cols=215 Identities=12% Similarity=0.020 Sum_probs=116.2
Q ss_pred CCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCC
Q 036510 23 GKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHK 102 (288)
Q Consensus 23 g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~ 102 (288)
+..|..++.++.+..+|.. + +.......+...+..+...+ ++. +..++.++.+..+|.. +.. ...+....
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g--~~~~~~~~~~~~~~~~~~~~--~g~-l~vgt~~~~l~~~d~~-g~~---~~~~~~~~ 176 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-G--TEKWRFKTKKAIYATPIVSE--DGT-IYVGSNDNYLYAINPD-GTE---KWRFKTND 176 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-S--CEEEEEECSSCCCSCCEECT--TSC-EEEECTTSEEEEECTT-SCE---EEEEECSS
T ss_pred CCEEEEEecCCEEEEEcCC-C--CEEEEEcCCCceeeeeEEcC--CCE-EEEEcCCCEEEEECCC-CCE---eEEEecCC
Confidence 3356667778888888764 2 34444444444445555432 244 5557778999999886 432 22333334
Q ss_pred CceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEee
Q 036510 103 SSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGG 182 (288)
Q Consensus 103 ~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~ 182 (288)
..+.++...++ +. +..++ +.|..+| .++.. .... ......+.++...++ ..+..++
T Consensus 177 ~~~~~~~~d~~--g~-l~v~t--~~l~~~d-~~g~~--~~~~-~~~~~~~~~~~~~~~---------------g~l~v~t 232 (330)
T 3hxj_A 177 AITSAASIGKD--GT-IYFGS--DKVYAIN-PDGTE--KWNF-YAGYWTVTRPAISED---------------GTIYVTS 232 (330)
T ss_dssp CCCSCCEECTT--CC-EEEES--SSEEEEC-TTSCE--EEEE-CCSSCCCSCCEECTT---------------SCEEEEE
T ss_pred CceeeeEEcCC--CE-EEEEe--CEEEEEC-CCCcE--EEEE-ccCCcceeceEECCC---------------CeEEEEc
Confidence 45666666554 44 33444 7788888 43321 1111 112223444444443 2466677
Q ss_pred cCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeE
Q 036510 183 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVY 262 (288)
Q Consensus 183 ~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~ 262 (288)
.++.+..+|. ++. .+..+......+.++...++ ..|..++.++.|..+|.+ . .. ..........+.
T Consensus 233 ~~~gl~~~~~-~g~----~~~~~~~~~~~~~~~~~~~~-----g~l~v~t~~ggl~~~d~~-g-~~--~~~~~~~~~~~~ 298 (330)
T 3hxj_A 233 LDGHLYAINP-DGT----EKWRFKTGKRIESSPVIGNT-----DTIYFGSYDGHLYAINPD-G-TE--KWNFETGSWIIA 298 (330)
T ss_dssp TTTEEEEECT-TSC----EEEEEECSSCCCSCCEECTT-----SCEEEECTTCEEEEECTT-S-CE--EEEEECSSCCCS
T ss_pred CCCeEEEECC-CCC----EeEEeeCCCCccccceEcCC-----CeEEEecCCCCEEEECCC-C-cE--EEEEEcCCcccc
Confidence 7777877763 321 11122222222233333333 357788888889888752 1 11 111111233456
Q ss_pred EEEeecCCCEEEEEeCCCcEEEeE
Q 036510 263 RVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 263 ~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
++...++|+++ .++.+|.+++..
T Consensus 299 ~~~~d~~g~l~-~gt~~G~~~~~~ 321 (330)
T 3hxj_A 299 TPVIDENGTIY-FGTRNGKFYALF 321 (330)
T ss_dssp CCEECTTCCEE-EECTTSCEEEEE
T ss_pred ceEEcCCCEEE-EEcCCCeEEEEe
Confidence 67777888764 588899998876
No 237
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.88 E-value=0.0023 Score=52.19 Aligned_cols=189 Identities=9% Similarity=0.068 Sum_probs=104.8
Q ss_pred cceEEEEEcCCCCEEEEeeCCC--cEEEEEeCCCCceeeEEEeccccC-eEEEEecCCCCCCEEEEeeCCCcEEEeecCC
Q 036510 12 DTVHDVAMDYYGKRLATASSDY--SIKIIGVGNNTSQHLAKLSGHKGA-VWEVAWAHPKFGSILASCSFDGTVIIWKEGN 88 (288)
Q Consensus 12 ~~v~~~~~s~~g~~l~s~~~d~--~i~lwd~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~ 88 (288)
....++.|+ ++.++.|++.++ .|+.+|... ++.+.++.-.... --.+... .+.+.+....++.+.++|..+
T Consensus 43 ~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~T--gkv~~~~~l~~~~FgeGit~~---g~~ly~ltw~~~~v~v~D~~t 116 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGLNGRSSIRKVDIES--GKTLQQIELGKRYFGEGISDW---KDKIVGLTWKNGLGFVWNIRN 116 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEECTTT--CCEEEEEECCTTCCEEEEEEE---TTEEEEEESSSSEEEEEETTT
T ss_pred cccceEEEE-CCEEEEECCCCCCceEEEEECCC--CcEEEEEecCCccceeEEEEe---CCEEEEEEeeCCEEEEEECcc
Confidence 345788998 678888888876 888888754 3555555432221 1235543 245666677799999999877
Q ss_pred CCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEee-ccCC-CCeeEEEeCCCCCCCce
Q 036510 89 SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRID-QAHP-VGVTSVSWAPSTAPGAL 166 (288)
Q Consensus 89 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~-~~~~-~~v~~i~~~p~~~~~~~ 166 (288)
.. ...+++- ...-+.++ +++ ..++. ...+++|.++|..+.......... .+.+ ..+..+.|. ++
T Consensus 117 ~~---~~~ti~~-~~eG~glt--~dg-~~L~~-SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G----- 182 (262)
T 3nol_A 117 LR---QVRSFNY-DGEGWGLT--HND-QYLIM-SDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG----- 182 (262)
T ss_dssp CC---EEEEEEC-SSCCCCEE--ECS-SCEEE-CCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT-----
T ss_pred Cc---EEEEEEC-CCCceEEe--cCC-CEEEE-ECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC-----
Confidence 65 3344442 12224444 453 33444 344778999998765432222221 1111 123345553 22
Q ss_pred ecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeec--ccc-----C--CcceEEEEecCCCCCCCcEEEEEeC
Q 036510 167 VGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPA--LQM-----H--TDWVRDVAWAPNLGLPKSTIASASE 233 (288)
Q Consensus 167 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~~~-----h--~~~V~~v~~sp~~~~~~~~l~s~s~ 233 (288)
.+.+..-.++.|.+.|..++.-... +.. +.. + .+--+.++|+|+. ..++++|-.
T Consensus 183 ---------~lyan~w~~~~I~vIDp~tG~V~~~-Id~~~L~~~~~~~~~~~~vlNGIA~dp~~---~~lfVTGK~ 245 (262)
T 3nol_A 183 ---------EIFANVWQTNKIVRIDPETGKVTGI-IDLNGILAEAGPLPSPIDVLNGIAWDKEH---HRLFVTGKL 245 (262)
T ss_dssp ---------EEEEEETTSSEEEEECTTTCBEEEE-EECTTGGGGSCSCCSSCCCEEEEEEETTT---TEEEEEETT
T ss_pred ---------EEEEEEccCCeEEEEECCCCcEEEE-EECCcCccccccccCcCCceEEEEEcCCC---CEEEEECCC
Confidence 4444444567788888877632111 110 110 1 1235789999975 467777743
No 238
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.88 E-value=0.0069 Score=49.31 Aligned_cols=229 Identities=12% Similarity=0.017 Sum_probs=123.5
Q ss_pred CEEEEeeCCCcEEEEEeCCCCcee---eEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeec
Q 036510 24 KRLATASSDYSIKIIGVGNNTSQH---LAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFED 100 (288)
Q Consensus 24 ~~l~s~~~d~~i~lwd~~~~~~~~---~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~ 100 (288)
++|+-+.. +.|+.++++...... ...+........+++|.+. .+.++++-..++.|..+++..... ...+..
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~-~~~ly~~d~~~~~I~~~~~~g~~~---~~~~~~ 76 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCV-DKVVYWTDISEPSIGRASLHGGEP---TTIIRQ 76 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETT-TTEEEEEETTTTEEEEEESSSCCC---EEEECT
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecC-CCEEEEEECCCCEEEEEecCCCCc---EEEEEC
Confidence 34444443 367777775432110 1112222334678899753 356777777789999998854321 112222
Q ss_pred CCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEE
Q 036510 101 HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS 180 (288)
Q Consensus 101 h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s 180 (288)
.......++++|++ +.++++-...+.|.++++..... . ............+.++|++. .++++
T Consensus 77 ~~~~p~~ia~d~~~-~~lyv~d~~~~~I~~~~~~g~~~-~--~~~~~~~~~P~~i~vd~~~g-------------~lyv~ 139 (267)
T 1npe_A 77 DLGSPEGIALDHLG-RTIFWTDSQLDRIEVAKMDGTQR-R--VLFDTGLVNPRGIVTDPVRG-------------NLYWT 139 (267)
T ss_dssp TCCCEEEEEEETTT-TEEEEEETTTTEEEEEETTSCSC-E--EEECSSCSSEEEEEEETTTT-------------EEEEE
T ss_pred CCCCccEEEEEecC-CeEEEEECCCCEEEEEEcCCCCE-E--EEEECCCCCccEEEEeeCCC-------------EEEEE
Confidence 22467889998863 45566666677898888753211 1 11111113456777887541 33444
Q ss_pred eec--CCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccc
Q 036510 181 GGC--DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFK 258 (288)
Q Consensus 181 ~~~--d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~ 258 (288)
... .+.|..+++.... .+.+. ......-..++++|+. +.+.++-...+.|..+++.... ....+...
T Consensus 140 ~~~~~~~~I~~~~~dg~~--~~~~~--~~~~~~P~gia~d~~~---~~lyv~d~~~~~I~~~~~~g~~---~~~~~~~~- 208 (267)
T 1npe_A 140 DWNRDNPKIETSHMDGTN--RRILA--QDNLGLPNGLTFDAFS---SQLCWVDAGTHRAECLNPAQPG---RRKVLEGL- 208 (267)
T ss_dssp ECCSSSCEEEEEETTSCC--CEEEE--CTTCSCEEEEEEETTT---TEEEEEETTTTEEEEEETTEEE---EEEEEECC-
T ss_pred ECCCCCcEEEEEecCCCC--cEEEE--ECCCCCCcEEEEcCCC---CEEEEEECCCCEEEEEecCCCc---eEEEecCC-
Confidence 332 3567666654321 11111 1112245789999964 3456666677889999875321 11222222
Q ss_pred cCeEEEEeecCCCEEEEEe-CCCcEEEeEc
Q 036510 259 TPVYRVSWSLTGNILAVAD-GNNNVTLWEE 287 (288)
Q Consensus 259 ~~i~~~~~spdg~~l~s~~-~d~~v~~w~~ 287 (288)
.....++. ++..|.++. .++.|..+|.
T Consensus 209 ~~P~gi~~--d~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 209 QYPFAVTS--YGKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp CSEEEEEE--ETTEEEEEETTTTEEEEEET
T ss_pred CCceEEEE--eCCEEEEEECCCCeEEEEeC
Confidence 23456654 456666665 4578887773
No 239
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.85 E-value=0.0021 Score=60.31 Aligned_cols=84 Identities=15% Similarity=0.240 Sum_probs=47.4
Q ss_pred CCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEE
Q 036510 184 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYR 263 (288)
Q Consensus 184 d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~ 263 (288)
++.|+.||+.++. .+..+..+.. +..-.+... +.++..|+.|+.++.||.+..+..++..+-.+. ...-
T Consensus 454 ~g~l~A~D~~tG~----~~W~~~~~~~-~~~g~~~ta----gglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~--~~~p 522 (689)
T 1yiq_A 454 SGKLIAWDPVKQQ----AAWEVPYVTI-FNGGTLSTA----GNLVFEGSADGRVIAYAADTGEKLWEQPAASGV--MAAP 522 (689)
T ss_dssp EEEEEEEETTTTE----EEEEEEESSS-CCCCEEEET----TTEEEEECTTSEEEEEETTTCCEEEEEECSSCC--CSCC
T ss_pred ceeEEEEECCCCC----eEeEccCCCC-ccCccceEC----CCEEEEECCCCcEEEEECCCCccceeeeCCCCc--ccCc
Confidence 4779999998873 3333333322 222233333 357888999999999998765333222211111 1233
Q ss_pred EEeecCCCE-EEEEeC
Q 036510 264 VSWSLTGNI-LAVADG 278 (288)
Q Consensus 264 ~~~spdg~~-l~s~~~ 278 (288)
+.|.+||++ +++.+.
T Consensus 523 ~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 523 VTYSVDGEQYVTFMAG 538 (689)
T ss_dssp EEEEETTEEEEEEEEC
T ss_pred eEEEECCEEEEEEEec
Confidence 677899975 444433
No 240
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.84 E-value=0.002 Score=52.60 Aligned_cols=192 Identities=8% Similarity=0.020 Sum_probs=106.5
Q ss_pred eEEEeccccC--eEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC
Q 036510 48 LAKLSGHKGA--VWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD 125 (288)
Q Consensus 48 ~~~~~~h~~~--v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d 125 (288)
+.++ .|... ...|.|+ .+.++.+.+.+|.|+++|+.+++..... +.. ....-.+.+. + ..+.+..-.+
T Consensus 46 v~~~-phd~~~ftqGL~~~---~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~-~~FgeGit~~--g-~~Ly~ltw~~ 115 (268)
T 3nok_A 46 IREY-PHATNAFTQGLVFH---QGHFFESTGHQGTLRQLSLESAQPVWME--RLG-NIFAEGLASD--G-ERLYQLTWTE 115 (268)
T ss_dssp EEEE-ECCTTCCEEEEEEE---TTEEEEEETTTTEEEECCSSCSSCSEEE--ECT-TCCEEEEEEC--S-SCEEEEESSS
T ss_pred EEEE-cCCCccccceEEEE---CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCC-CcceeEEEEe--C-CEEEEEEccC
Confidence 4444 45543 3678886 2678889999999999999887643222 332 1122335443 3 3445556678
Q ss_pred CcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeecc
Q 036510 126 GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPAL 205 (288)
Q Consensus 126 ~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 205 (288)
+.+.+||..+.... ..+...+.+ .++..+++.|+.+..++.|.++|..+.... ..+..
T Consensus 116 ~~v~V~D~~Tl~~~-------------~ti~~~~eG-------wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~-~~I~V- 173 (268)
T 3nok_A 116 GLLFTWSGMPPQRE-------------RTTRYSGEG-------WGLCYWNGKLVRSDGGTMLTFHEPDGFALV-GAVQV- 173 (268)
T ss_dssp CEEEEEETTTTEEE-------------EEEECSSCC-------CCEEEETTEEEEECSSSEEEEECTTTCCEE-EEEEC-
T ss_pred CEEEEEECCcCcEE-------------EEEeCCCce-------eEEecCCCEEEEECCCCEEEEEcCCCCeEE-EEEEe-
Confidence 89999998764321 122221111 111122355665556888999997664211 11111
Q ss_pred ccCC---cceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceE-ee-----------ccccCeEEEEeecCC
Q 036510 206 QMHT---DWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKV-LH-----------DFKTPVYRVSWSLTG 270 (288)
Q Consensus 206 ~~h~---~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~-~~-----------~~~~~i~~~~~spdg 270 (288)
..+. ..++.+.|. + +...|..-.+..|.+-|+++.+-. ... +. ...+..+.++|+|++
T Consensus 174 ~~~g~~v~~lNeLe~~-d----G~lyanvw~s~~I~vIDp~TG~V~--~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~ 246 (268)
T 3nok_A 174 KLRGQPVELINELECA-N----GVIYANIWHSSDVLEIDPATGTVV--GVIDASALTRAVAGQVTNPEAVLNGIAVEPGS 246 (268)
T ss_dssp EETTEECCCEEEEEEE-T----TEEEEEETTCSEEEEECTTTCBEE--EEEECHHHHHHHTTTCCCTTCCEEEEEECTTT
T ss_pred CCCCcccccccccEEe-C----CEEEEEECCCCeEEEEeCCCCcEE--EEEECCCCcccccccccCcCCceEEEEEcCCC
Confidence 1121 235677776 3 345655556778888887654211 010 01 112467899999987
Q ss_pred CEEEEEeC
Q 036510 271 NILAVADG 278 (288)
Q Consensus 271 ~~l~s~~~ 278 (288)
+.|.+.+.
T Consensus 247 ~rlfVTGK 254 (268)
T 3nok_A 247 GRIFMTGK 254 (268)
T ss_dssp CCEEEEET
T ss_pred CEEEEeCC
Confidence 76666543
No 241
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.78 E-value=0.012 Score=49.11 Aligned_cols=229 Identities=11% Similarity=-0.003 Sum_probs=119.5
Q ss_pred cceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCC--cEEEeecCCC
Q 036510 12 DTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDG--TVIIWKEGNS 89 (288)
Q Consensus 12 ~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~--~v~iwd~~~~ 89 (288)
....+++++++|+++++-..++.|..+|.+.. ....+. -......+++.++ ++++++..... .|..++..++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~---~~~~~~-~~~~p~gia~~~d--G~l~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN---QQIHAT-VEGKVSGLAFTSN--GDLVATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC---EEEEEE-CSSEEEEEEECTT--SCEEEEEECTTSCEEEEEECTTS
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc---eEEEEe-CCCCceeEEEcCC--CcEEEEeccCCcceEEEEcCCCC
Confidence 34567899999998777767888888876432 222222 1245788998754 67666654433 3555565544
Q ss_pred CceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeec--------cCCCCeeEEEeCCCC
Q 036510 90 NEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQ--------AHPVGVTSVSWAPST 161 (288)
Q Consensus 90 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~--------~~~~~v~~i~~~p~~ 161 (288)
. ......+. .......+...+. +..+++-...+.|..+|...+. ........ ..-.....| +|++
T Consensus 106 ~-~~~~~~~~-~~~~~~g~~~~~~--~~~~v~d~~~g~i~~~d~~~~~-~~v~~~~~~~~~~~~~~~~~~pngi--s~dg 178 (306)
T 2p4o_A 106 T-VETLLTLP-DAIFLNGITPLSD--TQYLTADSYRGAIWLIDVVQPS-GSIWLEHPMLARSNSESVFPAANGL--KRFG 178 (306)
T ss_dssp C-EEEEEECT-TCSCEEEEEESSS--SEEEEEETTTTEEEEEETTTTE-EEEEEECGGGSCSSTTCCSCSEEEE--EEET
T ss_pred e-EEEEEeCC-CccccCcccccCC--CcEEEEECCCCeEEEEeCCCCc-EeEEEECCccccccccCCCCcCCCc--CcCC
Confidence 3 21111111 1122344443333 4445554457778777764321 01110000 000011112 2322
Q ss_pred CCCceecccccCCCceeEEeecCCcEEEEEEeC-Cce-eeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEE
Q 036510 162 APGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN-GIW-KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239 (288)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~i 239 (288)
..++++-...+.|..+|+.. +.. ..+....+ ..-..+++.+++ ++.++-...+.|.+
T Consensus 179 -------------~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~----~~P~gi~vd~dG----~l~va~~~~~~V~~ 237 (306)
T 2p4o_A 179 -------------NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ----TNIDDFAFDVEG----NLYGATHIYNSVVR 237 (306)
T ss_dssp -------------TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES----CCCSSEEEBTTC----CEEEECBTTCCEEE
T ss_pred -------------CEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc----CCCCCeEECCCC----CEEEEeCCCCeEEE
Confidence 13455666678899999864 211 11111111 123556777763 56666666788999
Q ss_pred EEeecCCCcccceEeecc---ccCeEEEEee---cCCCEEEEEeCC
Q 036510 240 WTVAREGDQWEGKVLHDF---KTPVYRVSWS---LTGNILAVADGN 279 (288)
Q Consensus 240 w~~~~~~~~~~~~~~~~~---~~~i~~~~~s---pdg~~l~s~~~d 279 (288)
++.. ... ..+... -....+++|. ||++.|++++..
T Consensus 238 ~~~~--G~~---~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 238 IAPD--RST---TIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp ECTT--CCE---EEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred ECCC--CCE---EEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 8753 111 112111 2457899999 898887777653
No 242
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.78 E-value=0.013 Score=49.21 Aligned_cols=239 Identities=10% Similarity=-0.003 Sum_probs=121.6
Q ss_pred ceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEe-----------------ccccCeEEEEecCCCCCCEEEEe
Q 036510 13 TVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS-----------------GHKGAVWEVAWAHPKFGSILASC 75 (288)
Q Consensus 13 ~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~-----------------~h~~~v~~~~~~~~~~~~~l~s~ 75 (288)
...+++++++|+++.++..++.|..|+............. .......++++.++ +++++++
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~-~g~l~v~- 97 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQ-NNQLYIV- 97 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETT-TTEEEEE-
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCC-CCcEEEE-
Confidence 3466788999987888888888888876433221111100 01134688888642 2555554
Q ss_pred eCCCcEEEeecCCCCceEEeE-Eeec-CCCceeEEEecc-CCCCeEEEEEeC-----------------CCcEEEEeecC
Q 036510 76 SFDGTVIIWKEGNSNEWIKDH-VFED-HKSSVNSIDWAP-HELGLCLACGSS-----------------DGNISVFTARA 135 (288)
Q Consensus 76 s~d~~v~iwd~~~~~~~~~~~-~~~~-h~~~v~~l~~~p-~~~~~~l~sg~~-----------------d~~i~i~d~~~ 135 (288)
...+.+..+|...+. ..... ...+ .....+.+.+.| + +.+.++-.. ++.|..||...
T Consensus 98 d~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~--G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRT--GIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp ETTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTT--CCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred ECCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCC--CEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 344557777764321 11111 1111 112457788887 6 444443321 24566666543
Q ss_pred CCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCc-eeEEeecCCcEEEEEEeCCce-eeeeeeccccCCcceE
Q 036510 136 DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQ-KLCSGGCDNTVKVWKLYNGIW-KMDCFPALQMHTDWVR 213 (288)
Q Consensus 136 ~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~h~~~V~ 213 (288)
+. ... .... -.....|.|+|++ + ++++-...+.|..+|+..... ..+....+.+ -.
T Consensus 175 ~~-~~~--~~~~-~~~p~gia~~~dg--------------~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g----P~ 232 (322)
T 2fp8_A 175 KE-TTL--LLKE-LHVPGGAEVSADS--------------SFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN----PG 232 (322)
T ss_dssp TE-EEE--EEEE-ESCCCEEEECTTS--------------SEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS----EE
T ss_pred CE-EEE--eccC-CccCcceEECCCC--------------CEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC----CC
Confidence 21 111 1111 0123457777775 4 344545668899998764210 1111112222 46
Q ss_pred EEEecCCCCCCCcEEEEEeC----------CCcEEEEEeecCCCcccceEeecc----ccCeEEEEeecCCCEEEEEeCC
Q 036510 214 DVAWAPNLGLPKSTIASASE----------DGKVIIWTVAREGDQWEGKVLHDF----KTPVYRVSWSLTGNILAVADGN 279 (288)
Q Consensus 214 ~v~~sp~~~~~~~~l~s~s~----------D~~i~iw~~~~~~~~~~~~~~~~~----~~~i~~~~~spdg~~l~s~~~d 279 (288)
.+.+.+++ .+.++... .+.|..+|.. .. ....+... -..+..+++ .+|+++++...+
T Consensus 233 gi~~d~~G----~l~va~~~~~~~~~~~~~~~~v~~~d~~--G~--~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~ 303 (322)
T 2fp8_A 233 NIKRNADG----HFWVSSSEELDGNMHGRVDPKGIKFDEF--GN--ILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFH 303 (322)
T ss_dssp EEEECTTS----CEEEEEEEETTSSTTSCEEEEEEEECTT--SC--EEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSC
T ss_pred CeEECCCC----CEEEEecCcccccccCCCccEEEEECCC--CC--EEEEEECCCCCccccceEEEE-eCCEEEEeecCC
Confidence 67888864 45555443 3456666543 11 11222221 134666766 466666655567
Q ss_pred CcEEEeEc
Q 036510 280 NNVTLWEE 287 (288)
Q Consensus 280 ~~v~~w~~ 287 (288)
+.|..++.
T Consensus 304 ~~i~~~~~ 311 (322)
T 2fp8_A 304 GSVGILVY 311 (322)
T ss_dssp SEEEEEEC
T ss_pred CceEEEec
Confidence 88888874
No 243
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.76 E-value=0.0016 Score=59.37 Aligned_cols=227 Identities=13% Similarity=0.047 Sum_probs=120.0
Q ss_pred CCCEEEEeeCC-CcEEEEEeCCCCceeeEEEec-cccCeEEEEecC-CCCCCEEEEee------------------CCCc
Q 036510 22 YGKRLATASSD-YSIKIIGVGNNTSQHLAKLSG-HKGAVWEVAWAH-PKFGSILASCS------------------FDGT 80 (288)
Q Consensus 22 ~g~~l~s~~~d-~~i~lwd~~~~~~~~~~~~~~-h~~~v~~~~~~~-~~~~~~l~s~s------------------~d~~ 80 (288)
||++|.....+ ..|.+-|++. .++...+.- .......+++.. + ++.++..++ .++.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t--~~~~~ii~ip~g~~phg~~~~~~p-~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDV--MKCDAILEIPNAKGIHGLRPQKWP-RSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTT--TEEEEEEECSSCCSEEEEEECCSS-BCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCC--ceEeeEEeCCCCCCCcceeeeecC-CCcEEEEecccccccCCCCcccccccccCce
Confidence 78887776665 5588888753 355553321 123467788743 3 467776663 3557
Q ss_pred EEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEe-CC--------------CcEEEE--------------
Q 036510 81 VIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGS-SD--------------GNISVF-------------- 131 (288)
Q Consensus 81 v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~-~d--------------~~i~i~-------------- 131 (288)
+.+.|..+.. ...++.--. .-..++++|+ ++.+.+.+ .. ..|.+.
T Consensus 177 vtvID~~t~~---v~~qI~Vgg-~pd~~~~spd--Gk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~ 250 (595)
T 1fwx_A 177 FTAVDADKWE---VAWQVLVSG-NLDNCDADYE--GKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDY 250 (595)
T ss_dssp EEEEETTTTE---EEEEEEESS-CCCCEEECSS--SSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCS
T ss_pred EEEEECCCCe---EEEEEEeCC-CccceEECCC--CCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCe
Confidence 8888876532 222332111 2355667887 44444333 22 123333
Q ss_pred ---------eecC--CCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCce---
Q 036510 132 ---------TARA--DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIW--- 197 (288)
Q Consensus 132 ---------d~~~--~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--- 197 (288)
|.++ +... ...+. -......+.++|++. ..++++..+.+|.++|+.+...
T Consensus 251 ~~i~~V~VID~~~~~~~~~-~~~Ip--vg~~PhGv~~sPDGk-------------~v~V~~~~s~~VsVid~~~~~~~~~ 314 (595)
T 1fwx_A 251 QELNGVKVVDGRKEASSLF-TRYIP--IANNPHGCNMAPDKK-------------HLCVAGKLSPTVTVLDVTRFDAVFY 314 (595)
T ss_dssp EEETTEEEEECSGGGCCSS-EEEEE--EESSCCCEEECTTSS-------------EEEEECTTSSBEEEEEGGGHHHHHH
T ss_pred eEECcEEEEeCcccCCcee-EEEEe--cCCCceEEEEcCCCC-------------EEEEeCCCCCeEEEEECcccccccc
Confidence 3332 1110 00000 011234566677662 4577888899999999874310
Q ss_pred -ee----eeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCC-----C--cccceEeeccccCe----
Q 036510 198 -KM----DCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREG-----D--QWEGKVLHDFKTPV---- 261 (288)
Q Consensus 198 -~~----~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~-----~--~~~~~~~~~~~~~i---- 261 (288)
++ .....+.... .-+-+.|+|++ ...++.--|++|..||+.... + ......+..+..+-
T Consensus 315 ~~l~~~~~v~~~v~vG~-gP~h~aF~~dG----~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~ 389 (595)
T 1fwx_A 315 ENADPRSAVVAEPELGL-GPLHTAFDGRG----NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKT 389 (595)
T ss_dssp SCCCGGGGEEECCBCCS-CEEEEEECTTS----EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEE
T ss_pred cccCcccceEEEcCCCC-CcceEEECCCC----eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeeccccccccee
Confidence 00 0112222222 24778999974 345566679999999987520 0 00111222222221
Q ss_pred -EEEEeecCCCEEEEEeC
Q 036510 262 -YRVSWSLTGNILAVADG 278 (288)
Q Consensus 262 -~~~~~spdg~~l~s~~~ 278 (288)
..+.++|||++|+++..
T Consensus 390 ~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 390 VMGETLDATNDWLVCLSK 407 (595)
T ss_dssp TTTTSTTCCSSEEEEEES
T ss_pred ccceEeCCCCCEEEEcCC
Confidence 22366899999999853
No 244
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.73 E-value=0.012 Score=47.51 Aligned_cols=194 Identities=9% Similarity=-0.043 Sum_probs=103.8
Q ss_pred eeEEEeccccC--eEEEEecCCCCCCEEEEeeCCC--cEEEeecCCCCceEEeEEeecCCC-ceeEEEeccCCCCeEEEE
Q 036510 47 HLAKLSGHKGA--VWEVAWAHPKFGSILASCSFDG--TVIIWKEGNSNEWIKDHVFEDHKS-SVNSIDWAPHELGLCLAC 121 (288)
Q Consensus 47 ~~~~~~~h~~~--v~~~~~~~~~~~~~l~s~s~d~--~v~iwd~~~~~~~~~~~~~~~h~~-~v~~l~~~p~~~~~~l~s 121 (288)
.+..+ .|... .-.+.|+. +.++.|.+.+| +|+..|+.++.. ...+..... ..-.+.+.. +.+...
T Consensus 11 v~~~~-phd~~~ftqGL~~~~---~~LyestG~~g~S~v~~vD~~tgkv---~~~~~l~~~~fgeGi~~~~---~~ly~l 80 (243)
T 3mbr_X 11 VVKRY-PHDTTAFTEGLFYLR---GHLYESTGETGRSSVRKVDLETGRI---LQRAEVPPPYFGAGIVAWR---DRLIQL 80 (243)
T ss_dssp EEEEE-ECCTTCCEEEEEEET---TEEEEEECCTTSCEEEEEETTTCCE---EEEEECCTTCCEEEEEEET---TEEEEE
T ss_pred EEEEc-CCCCccccccEEEEC---CEEEEECCCCCCceEEEEECCCCCE---EEEEeCCCCcceeEEEEeC---CEEEEE
Confidence 34444 56543 45888863 57777878764 999999987753 222222111 123344332 455555
Q ss_pred EeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeee
Q 036510 122 GSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDC 201 (288)
Q Consensus 122 g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 201 (288)
.-.++.+.+||..+........ ..++. ..+. .+++.|+.+..++.|.++|..+.... ..
T Consensus 81 tw~~~~v~v~D~~tl~~~~ti~-~~~~G---wglt----------------~dg~~L~vSdgs~~l~~iDp~t~~~~-~~ 139 (243)
T 3mbr_X 81 TWRNHEGFVYDLATLTPRARFR-YPGEG---WALT----------------SDDSHLYMSDGTAVIRKLDPDTLQQV-GS 139 (243)
T ss_dssp ESSSSEEEEEETTTTEEEEEEE-CSSCC---CEEE----------------ECSSCEEEECSSSEEEEECTTTCCEE-EE
T ss_pred EeeCCEEEEEECCcCcEEEEEe-CCCCc---eEEe----------------eCCCEEEEECCCCeEEEEeCCCCeEE-EE
Confidence 6678899999987643221111 01111 1121 12244555556888999997664211 11
Q ss_pred eeccccCC---cceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEee-----------ccccCeEEEEee
Q 036510 202 FPALQMHT---DWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLH-----------DFKTPVYRVSWS 267 (288)
Q Consensus 202 ~~~~~~h~---~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~-----------~~~~~i~~~~~s 267 (288)
+.. ..+. ..++.+.|.. +...|..-.+..|.+.|+++.+.... -.+. ...+..+.++|+
T Consensus 140 I~V-~~~g~~~~~lNeLe~~~-----G~lyanvw~s~~I~vIDp~tG~V~~~-idl~~l~~~~~~~~~~~~~vlNGIA~d 212 (243)
T 3mbr_X 140 IKV-TAGGRPLDNLNELEWVN-----GELLANVWLTSRIARIDPASGKVVAW-IDLQALVPDADALTDSTNDVLNGIAFD 212 (243)
T ss_dssp EEC-EETTEECCCEEEEEEET-----TEEEEEETTTTEEEEECTTTCBEEEE-EECGGGSTTTTSCCCTTSSCEEEEEEE
T ss_pred EEE-ccCCcccccceeeEEeC-----CEEEEEECCCCeEEEEECCCCCEEEE-EECCcCccccccccCCcCCceEEEEEc
Confidence 111 1111 2356677653 34555554577888888765421100 0001 112367899999
Q ss_pred cCCCEEEEEeC
Q 036510 268 LTGNILAVADG 278 (288)
Q Consensus 268 pdg~~l~s~~~ 278 (288)
|+++.|.+.+.
T Consensus 213 ~~~~~lfVTGK 223 (243)
T 3mbr_X 213 AEHDRLFVTGK 223 (243)
T ss_dssp TTTTEEEEEET
T ss_pred CCCCEEEEECC
Confidence 99887776654
No 245
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.72 E-value=0.018 Score=49.31 Aligned_cols=225 Identities=12% Similarity=0.089 Sum_probs=114.1
Q ss_pred CCEEEEeeCCCcEEEEEeCCCCceeeEEEecc---------ccCe-EEEEecCCCCCCEEEEeeCCCcEEEeecCCCCce
Q 036510 23 GKRLATASSDYSIKIIGVGNNTSQHLAKLSGH---------KGAV-WEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEW 92 (288)
Q Consensus 23 g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h---------~~~v-~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~ 92 (288)
+..+..++.++.+..+|...+ +.+...... ...+ ..+.. .+..+..++.++.+..+|..+++.
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG--~~~W~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~v~~~~g~l~a~d~~tG~~- 125 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDG--KEIWSVSLAEKDGWFSKEPALLSGGVTV----SGGHVYIGSEKAQVYALNTSDGTV- 125 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTC--CEEEEEECCC---CCSCCCCCEEEEEEE----ETTEEEEEETTSEEEEEETTTCCE-
T ss_pred CCEEEEEcCCCeEEEEEccCC--ceeeeecCccccccccccCcccccCceE----eCCEEEEEcCCCEEEEEECCCCCE-
Confidence 456777888888988887533 334333321 1222 22222 145777788999999999987753
Q ss_pred EEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceeccccc
Q 036510 93 IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFL 172 (288)
Q Consensus 93 ~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~ 172 (288)
................. +..+..++.++.|..+|.+++... ...... ..+..+ .... . ...
T Consensus 126 --~W~~~~~~~~~~~p~~~----~~~v~v~~~~g~l~~~d~~tG~~~--W~~~~~--~~~~~~--~~~~--~-----~~~ 186 (376)
T 3q7m_A 126 --AWQTKVAGEALSRPVVS----DGLVLIHTSNGQLQALNEADGAVK--WTVNLD--MPSLSL--RGES--A-----PTT 186 (376)
T ss_dssp --EEEEECSSCCCSCCEEE----TTEEEEECTTSEEEEEETTTCCEE--EEEECC--C-------CCCC--C-----CEE
T ss_pred --EEEEeCCCceEcCCEEE----CCEEEEEcCCCeEEEEECCCCcEE--EEEeCC--CCceee--cCCC--C-----cEE
Confidence 22222221111111222 234667888999999998765421 111111 111000 0000 0 001
Q ss_pred CCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCC-------cceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecC
Q 036510 173 DPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHT-------DWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVARE 245 (288)
Q Consensus 173 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~-------~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~ 245 (288)
. ...++.+..++.+..+|..++... ....... ..+..+.-.|.. .+..+..++.++.+..+|.+..
T Consensus 187 ~-~~~v~~g~~~g~l~~~d~~tG~~~----w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~~d~~tG 259 (376)
T 3q7m_A 187 A-FGAAVVGGDNGRVSAVLMEQGQMI----WQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTALDLRSG 259 (376)
T ss_dssp E-TTEEEECCTTTEEEEEETTTCCEE----EEEECCC-----------CCCCCCEE--ETTEEEEECTTSCEEEEETTTC
T ss_pred E-CCEEEEEcCCCEEEEEECCCCcEE----EEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEEEECCCC
Confidence 1 145677788889999998776321 1111000 000001111210 1246777888999999987654
Q ss_pred CCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 246 GDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 246 ~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
+..+.. .. .....+. .++..+.+++.++.|..+|.
T Consensus 260 ~~~w~~----~~-~~~~~~~--~~~~~l~~~~~~g~l~~~d~ 294 (376)
T 3q7m_A 260 QIMWKR----EL-GSVNDFI--VDGNRIYLVDQNDRVMALTI 294 (376)
T ss_dssp CEEEEE----CC-CCEEEEE--EETTEEEEEETTCCEEEEET
T ss_pred cEEeec----cC-CCCCCce--EECCEEEEEcCCCeEEEEEC
Confidence 222211 11 1222222 34667777778888888773
No 246
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.69 E-value=0.0047 Score=58.50 Aligned_cols=197 Identities=14% Similarity=0.143 Sum_probs=94.6
Q ss_pred CeEEEEec-CCCCCCEEEEee-CC----CcEEEeecCCC-CceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC----
Q 036510 57 AVWEVAWA-HPKFGSILASCS-FD----GTVIIWKEGNS-NEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD---- 125 (288)
Q Consensus 57 ~v~~~~~~-~~~~~~~l~s~s-~d----~~v~iwd~~~~-~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d---- 125 (288)
.+...+|| ++ |++|+-+. .+ .+|+++|+.++ ... ...+. .....+.|+|++ ..++....+
T Consensus 175 ~~~~~~~S~PD--G~~lAy~~~~~G~~~~~l~v~dl~~g~~~l--~~~~~---~~~~~~~WspDg--~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 175 DVMEVKPAPPE--HDLVAFSVDMSGNEVYTIEFKRISDPSQTI--ADKVS---GTNGEIVWGPDH--TSLFYVTKDETLR 245 (751)
T ss_dssp EEEEEEECTTT--TCEEEEEEESSSSSCEEEEEEETTCTTCCC--CCCEE---EECSCCEECSST--TEEEEEEECTTCC
T ss_pred EEeeeEecCCC--CCEEEEEEeCCCCceEEEEEEECCCCCEeC--Ccccc---CceeeEEEecCC--CEEEEEEECCCCC
Confidence 57788998 65 77777433 23 35999998776 411 11111 123568899985 333333333
Q ss_pred -CcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeE-Eee--cCCcEEEEEEeCCceee--
Q 036510 126 -GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLC-SGG--CDNTVKVWKLYNGIWKM-- 199 (288)
Q Consensus 126 -~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~-s~~--~d~~i~iwd~~~~~~~~-- 199 (288)
..|.++++..+..................+.|+|++ +.|+ +.. ....|.++|+.++....
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg--------------~~l~~~~~~~~~~~l~~~d~~~~~~~~~~ 311 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADT--------------NTLCIGSQSPETAEVHLLDLRKGNAHNTL 311 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTS--------------SEEEEEEECSSCEEEEEEESSSCTTCCCE
T ss_pred CCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCC--------------CEEEEEecCCCCceEEEEECCCCCCCcee
Confidence 246666665432111122112223345678899987 3443 322 23347777876542111
Q ss_pred eeeeccccCCcceEEEEecCCCCCCCcEEEEEeCC--CcEEEEEeecCC-Ccccce-Eeecc-ccCeEEEEeecCCCE-E
Q 036510 200 DCFPALQMHTDWVRDVAWAPNLGLPKSTIASASED--GKVIIWTVAREG-DQWEGK-VLHDF-KTPVYRVSWSLTGNI-L 273 (288)
Q Consensus 200 ~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D--~~i~iw~~~~~~-~~~~~~-~~~~~-~~~i~~~~~spdg~~-l 273 (288)
+. ..........++.|+.. +.++.....+ +.-+||.+.... ..+. . ++... ...+..+.+ ++.. +
T Consensus 312 ~~--l~~~~~~~~~s~~~~~g----~~l~~~t~~~~a~~~~L~~~d~~~~~~~~-~~li~~~~~~~l~~~~~--~~~~lv 382 (751)
T 2xe4_A 312 EI--VRPREKGVRYDVQMHGT----SHLVILTNEGGAVNHKLLIAPRGQPSDWS-HVLVDHSEDVFMESIAV--RSNYLV 382 (751)
T ss_dssp EE--SSCCCTTCCEEEEEETT----TEEEEEECTTTCTTCEEEEEETTSTTCCC-CEEECCCSSEEEEEEEE--CSSEEE
T ss_pred EE--eecCCCCceEEEeeeeC----CEEEEEeCCCCCCCcEEEEEcCCCcccce-eeEECCCCCcEEEEEEE--ECCEEE
Confidence 11 11223344556665543 2334444444 444555443221 1111 2 22211 113444444 4544 5
Q ss_pred EEEeCCCcEEEe
Q 036510 274 AVADGNNNVTLW 285 (288)
Q Consensus 274 ~s~~~d~~v~~w 285 (288)
++...|+..+||
T Consensus 383 ~~~~~~g~~~l~ 394 (751)
T 2xe4_A 383 VAGRRAGLTRIW 394 (751)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEeCCEEEEE
Confidence 555667765554
No 247
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.69 E-value=0.004 Score=58.30 Aligned_cols=80 Identities=10% Similarity=0.190 Sum_probs=44.4
Q ss_pred CcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEE
Q 036510 185 NTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRV 264 (288)
Q Consensus 185 ~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~ 264 (288)
+.|..||+.++. .+..+. +..++....+... +.++..++.|+.+++||.+..+..+.... +......-+
T Consensus 457 g~l~A~D~~tG~----~~W~~~-~~~~~~~g~~~~~----g~~v~~g~~dg~l~a~D~~tG~~lw~~~~--~~~~~~~p~ 525 (677)
T 1kb0_A 457 GRLLAWDPVAQK----AAWSVE-HVSPWNGGTLTTA----GNVVFQGTADGRLVAYHAATGEKLWEAPT--GTGVVAAPS 525 (677)
T ss_dssp EEEEEEETTTTE----EEEEEE-ESSSCCCCEEEET----TTEEEEECTTSEEEEEETTTCCEEEEEEC--SSCCCSCCE
T ss_pred cEEEEEeCCCCc----EEeecC-CCCCCcCcceEeC----CCEEEEECCCCcEEEEECCCCceeeeeeC--CCCcccCCE
Confidence 678899988773 222222 1122233334443 34677889999999999876432221111 111122346
Q ss_pred EeecCCCEEEE
Q 036510 265 SWSLTGNILAV 275 (288)
Q Consensus 265 ~~spdg~~l~s 275 (288)
.|.++|+++++
T Consensus 526 ~y~~~G~~~v~ 536 (677)
T 1kb0_A 526 TYMVDGRQYVS 536 (677)
T ss_dssp EEEETTEEEEE
T ss_pred EEEeCCEEEEE
Confidence 67899975443
No 248
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.68 E-value=0.0016 Score=60.67 Aligned_cols=76 Identities=11% Similarity=0.160 Sum_probs=45.8
Q ss_pred eEEEEEcCCCCEEEEeeC-CCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEee-CC-----CcEEEeec
Q 036510 14 VHDVAMDYYGKRLATASS-DYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCS-FD-----GTVIIWKE 86 (288)
Q Consensus 14 v~~~~~s~~g~~l~s~~~-d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s-~d-----~~v~iwd~ 86 (288)
..++++..+|++++.|+. +..+.+||........+..+...... .+++..+ ++++++.|+ .+ ..+.+||.
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~-~s~~~~~--dg~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGY-QSSATMS--DGRVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSS-CEEEECT--TSCEEEECCCCCSSSCCCCEEEEET
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccc-cceEEec--CCeEEEEeCcccCCcccccceEeCC
Confidence 334667789999999985 46799999754433333222211111 1233322 378888888 44 57899998
Q ss_pred CCCCceE
Q 036510 87 GNSNEWI 93 (288)
Q Consensus 87 ~~~~~~~ 93 (288)
.+. .|.
T Consensus 322 ~t~-~W~ 327 (656)
T 1k3i_A 322 SSK-TWT 327 (656)
T ss_dssp TTT-EEE
T ss_pred CCC-cce
Confidence 653 453
No 249
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.65 E-value=0.016 Score=47.04 Aligned_cols=224 Identities=14% Similarity=0.052 Sum_probs=121.1
Q ss_pred cceEEEEEcCCCCE-EEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCC
Q 036510 12 DTVHDVAMDYYGKR-LATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN 90 (288)
Q Consensus 12 ~~v~~~~~s~~g~~-l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~ 90 (288)
....++++++++.. +++-...+.|..++.++... ...+.........+++.+. .+.++++-...+.|.++++....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~~~~~~~~~~p~~ia~d~~-~~~lyv~d~~~~~I~~~~~~g~~ 112 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP--TTIIRQDLGSPEGIALDHL-GRTIFWTDSQLDRIEVAKMDGTQ 112 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC--EEEECTTCCCEEEEEEETT-TTEEEEEETTTTEEEEEETTSCS
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc--EEEEECCCCCccEEEEEec-CCeEEEEECCCCEEEEEEcCCCC
Confidence 34568889986544 45555578899888764322 1122222245688898753 35667777778899999875322
Q ss_pred ceEEeEEeecCCCceeEEEeccCCCCeEEEEEeC--CCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceec
Q 036510 91 EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSS--DGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG 168 (288)
Q Consensus 91 ~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~ 168 (288)
. . ............++++|++ +.++++... .+.|..+++... ... ......-.....+.++|++.
T Consensus 113 ~--~-~~~~~~~~~P~~i~vd~~~-g~lyv~~~~~~~~~I~~~~~dg~-~~~--~~~~~~~~~P~gia~d~~~~------ 179 (267)
T 1npe_A 113 R--R-VLFDTGLVNPRGIVTDPVR-GNLYWTDWNRDNPKIETSHMDGT-NRR--ILAQDNLGLPNGLTFDAFSS------ 179 (267)
T ss_dssp C--E-EEECSSCSSEEEEEEETTT-TEEEEEECCSSSCEEEEEETTSC-CCE--EEECTTCSCEEEEEEETTTT------
T ss_pred E--E-EEEECCCCCccEEEEeeCC-CEEEEEECCCCCcEEEEEecCCC-CcE--EEEECCCCCCcEEEEcCCCC------
Confidence 1 1 1122222456889999864 454444433 357777766422 111 11111122456777877651
Q ss_pred ccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCc
Q 036510 169 SGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQ 248 (288)
Q Consensus 169 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~ 248 (288)
.+.++-...+.|..+|..... ..... .+... -..++... +..+++-...+.|..+|....+
T Consensus 180 -------~lyv~d~~~~~I~~~~~~g~~-~~~~~---~~~~~-P~gi~~d~-----~~lyva~~~~~~v~~~d~~~g~-- 240 (267)
T 1npe_A 180 -------QLCWVDAGTHRAECLNPAQPG-RRKVL---EGLQY-PFAVTSYG-----KNLYYTDWKTNSVIAMDLAISK-- 240 (267)
T ss_dssp -------EEEEEETTTTEEEEEETTEEE-EEEEE---ECCCS-EEEEEEET-----TEEEEEETTTTEEEEEETTTTE--
T ss_pred -------EEEEEECCCCEEEEEecCCCc-eEEEe---cCCCC-ceEEEEeC-----CEEEEEECCCCeEEEEeCCCCC--
Confidence 445566667789888875321 11111 11111 23454432 3455555567889888865321
Q ss_pred ccceEeeccc-cCeEEEEeecCCC
Q 036510 249 WEGKVLHDFK-TPVYRVSWSLTGN 271 (288)
Q Consensus 249 ~~~~~~~~~~-~~i~~~~~spdg~ 271 (288)
....+.... .....+++.|++-
T Consensus 241 -~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 241 -EMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp -EEEEECCSSCCCCCCEEEECSCC
T ss_pred -ceEEEccccccccceeeecCccC
Confidence 112222211 1366788888764
No 250
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.65 E-value=0.017 Score=47.18 Aligned_cols=188 Identities=7% Similarity=-0.020 Sum_probs=106.0
Q ss_pred cceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCc
Q 036510 12 DTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNE 91 (288)
Q Consensus 12 ~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~ 91 (288)
....++.|+ ++.++.|.+.++.|+.+|...+ +.+.++.+.....-.+... .+.+++....++.+.++|..+..
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tg--kv~~~~l~~~~FgeGit~~---g~~Ly~ltw~~~~v~V~D~~Tl~- 127 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESA--QPVWMERLGNIFAEGLASD---GERLYQLTWTEGLLFTWSGMPPQ- 127 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCS--SCSEEEECTTCCEEEEEEC---SSCEEEEESSSCEEEEEETTTTE-
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCC--cEEeEECCCCcceeEEEEe---CCEEEEEEccCCEEEEEECCcCc-
Confidence 445788887 4678888999999999988544 4444441111112335653 24677777789999999987654
Q ss_pred eEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCC---CeeEEEeCCCCCCCceec
Q 036510 92 WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPV---GVTSVSWAPSTAPGALVG 168 (288)
Q Consensus 92 ~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~---~v~~i~~~p~~~~~~~~~ 168 (288)
...+++. ...-+.++ +++ .. |.....+++|.++|..+.......... .++. .+..+.|. +
T Consensus 128 --~~~ti~~-~~eGwGLt--~Dg-~~-L~vSdGs~~l~~iDp~T~~v~~~I~V~-~~g~~v~~lNeLe~~-d-------- 190 (268)
T 3nok_A 128 --RERTTRY-SGEGWGLC--YWN-GK-LVRSDGGTMLTFHEPDGFALVGAVQVK-LRGQPVELINELECA-N-------- 190 (268)
T ss_dssp --EEEEEEC-SSCCCCEE--EET-TE-EEEECSSSEEEEECTTTCCEEEEEECE-ETTEECCCEEEEEEE-T--------
T ss_pred --EEEEEeC-CCceeEEe--cCC-CE-EEEECCCCEEEEEcCCCCeEEEEEEeC-CCCcccccccccEEe-C--------
Confidence 3344442 22335555 342 34 444445889999998765432222211 1211 23444444 2
Q ss_pred ccccCCCceeEEeecCCcEEEEEEeCCceeeee-eeccc------c--CCcceEEEEecCCCCCCCcEEEEEe
Q 036510 169 SGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDC-FPALQ------M--HTDWVRDVAWAPNLGLPKSTIASAS 232 (288)
Q Consensus 169 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~------~--h~~~V~~v~~sp~~~~~~~~l~s~s 232 (288)
+.+.+..-.++.|.+.|..++.-.... ...+. . -.+--+.++|+|+. ..+++||-
T Consensus 191 ------G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~---~rlfVTGK 254 (268)
T 3nok_A 191 ------GVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGS---GRIFMTGK 254 (268)
T ss_dssp ------TEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTT---CCEEEEET
T ss_pred ------CEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCC---CEEEEeCC
Confidence 244444445678888888776321110 00010 1 11245789999975 46788774
No 251
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.57 E-value=0.0016 Score=54.53 Aligned_cols=221 Identities=14% Similarity=0.061 Sum_probs=108.2
Q ss_pred ceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCce
Q 036510 13 TVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEW 92 (288)
Q Consensus 13 ~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~ 92 (288)
.+.++...++|++++ +..+ +..+|.+ ++.+..+..+.......... +..+..++.++.+..+|.. +..
T Consensus 61 ~~~~~~~~~~g~l~v-~t~~--l~~~d~~---g~~~~~~~~~~~~~~~~~~~----~~~l~v~t~~~~l~~~d~~-g~~- 128 (330)
T 3hxj_A 61 IECRPSIGKDGTIYF-GSDK--VYAINPD---GTEKWRFDTKKAIVSDFTIF----EDILYVTSMDGHLYAINTD-GTE- 128 (330)
T ss_dssp EEECCEETTTTEECC-SSCE--EEEECCC---GGGGGGSCC-----CCEEEE----TTEEEEECTTSEEEEECTT-SCE-
T ss_pred cccceEEecCCcEEE-ecCc--EEEECCC---CcEEEEEECCCCcccCceEE----CCEEEEEecCCEEEEEcCC-CCE-
Confidence 345556666675443 4434 6666642 22222222112112222222 3456667788999999876 432
Q ss_pred EEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceeccccc
Q 036510 93 IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFL 172 (288)
Q Consensus 93 ~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~ 172 (288)
......+...+.++...++ +. +..|+.++.|..+|.. +.. .... ......+.++...++
T Consensus 129 --~~~~~~~~~~~~~~~~~~~--g~-l~vgt~~~~l~~~d~~-g~~--~~~~-~~~~~~~~~~~~d~~------------ 187 (330)
T 3hxj_A 129 --KWRFKTKKAIYATPIVSED--GT-IYVGSNDNYLYAINPD-GTE--KWRF-KTNDAITSAASIGKD------------ 187 (330)
T ss_dssp --EEEEECSSCCCSCCEECTT--SC-EEEECTTSEEEEECTT-SCE--EEEE-ECSSCCCSCCEECTT------------
T ss_pred --EEEEcCCCceeeeeEEcCC--CE-EEEEcCCCEEEEECCC-CCE--eEEE-ecCCCceeeeEEcCC------------
Confidence 2233334444556655554 34 5567778889999876 321 1111 111222333333333
Q ss_pred CCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccce
Q 036510 173 DPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGK 252 (288)
Q Consensus 173 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~ 252 (288)
..+..++ +.|..+| .++. ...........+.++...+++ .|..++.++.|..++.+. ... .
T Consensus 188 ---g~l~v~t--~~l~~~d-~~g~----~~~~~~~~~~~~~~~~~~~~g-----~l~v~t~~~gl~~~~~~g-~~~---~ 248 (330)
T 3hxj_A 188 ---GTIYFGS--DKVYAIN-PDGT----EKWNFYAGYWTVTRPAISEDG-----TIYVTSLDGHLYAINPDG-TEK---W 248 (330)
T ss_dssp ---CCEEEES--SSEEEEC-TTSC----EEEEECCSSCCCSCCEECTTS-----CEEEEETTTEEEEECTTS-CEE---E
T ss_pred ---CEEEEEe--CEEEEEC-CCCc----EEEEEccCCcceeceEECCCC-----eEEEEcCCCeEEEECCCC-CEe---E
Confidence 2344454 7788888 5542 112222233446666666652 466677788888876321 111 1
Q ss_pred EeeccccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 253 VLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 253 ~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
........+..+...++|+ |..++.++.|..+|
T Consensus 249 ~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 249 RFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAIN 281 (330)
T ss_dssp EEECSSCCCSCCEECTTSC-EEEECTTCEEEEEC
T ss_pred EeeCCCCccccceEcCCCe-EEEecCCCCEEEEC
Confidence 1111112223344445554 45566777777665
No 252
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.56 E-value=0.023 Score=46.53 Aligned_cols=203 Identities=7% Similarity=0.001 Sum_probs=111.0
Q ss_pred eeEEEeccccC--eEEEEecCCCCCCEEEEeeC--CCcEEEeecCCCCceEEeEEeec-CCCceeEEEeccCCCCeEEEE
Q 036510 47 HLAKLSGHKGA--VWEVAWAHPKFGSILASCSF--DGTVIIWKEGNSNEWIKDHVFED-HKSSVNSIDWAPHELGLCLAC 121 (288)
Q Consensus 47 ~~~~~~~h~~~--v~~~~~~~~~~~~~l~s~s~--d~~v~iwd~~~~~~~~~~~~~~~-h~~~v~~l~~~p~~~~~~l~s 121 (288)
.+.++ .|... ...+.|+++ +.++++.+. +++|.+.|+.++.. ...+.. .......+.+.. +.+.++
T Consensus 11 vv~~~-p~~~~~f~~Gl~~~~d--g~Lyvstg~~~~s~v~~iD~~tg~v---~~~i~l~~~~fgeGi~~~g---~~lyv~ 81 (266)
T 2iwa_A 11 VLNEF-PHDPYAFTQGLVYAEN--DTLFESTGLYGRSSVRQVALQTGKV---ENIHKMDDSYFGEGLTLLN---EKLYQV 81 (266)
T ss_dssp EEEEE-ECCTTCCEEEEEECST--TEEEEEECSTTTCEEEEEETTTCCE---EEEEECCTTCCEEEEEEET---TEEEEE
T ss_pred EEEEE-ECCCCCCcccEEEeCC--CeEEEECCCCCCCEEEEEECCCCCE---EEEEecCCCcceEEEEEeC---CEEEEE
Confidence 34444 34432 478999754 666666654 68999999987652 223321 112233455543 355666
Q ss_pred EeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeee
Q 036510 122 GSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDC 201 (288)
Q Consensus 122 g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 201 (288)
.-.++.+.++|..+...... +.-+.+.+ ..+. +++ +.++.+..+++|.++|..+.... ..
T Consensus 82 t~~~~~v~viD~~t~~v~~~--i~~g~~~g-~glt--~Dg--------------~~l~vs~gs~~l~viD~~t~~v~-~~ 141 (266)
T 2iwa_A 82 VWLKNIGFIYDRRTLSNIKN--FTHQMKDG-WGLA--TDG--------------KILYGSDGTSILYEIDPHTFKLI-KK 141 (266)
T ss_dssp ETTCSEEEEEETTTTEEEEE--EECCSSSC-CEEE--ECS--------------SSEEEECSSSEEEEECTTTCCEE-EE
T ss_pred EecCCEEEEEECCCCcEEEE--EECCCCCe-EEEE--ECC--------------CEEEEECCCCeEEEEECCCCcEE-EE
Confidence 67788999999875422111 11110111 1122 222 44444556889999997664211 11
Q ss_pred eeccccCC---cceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceE-eecc-----------ccCeEEEEe
Q 036510 202 FPALQMHT---DWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKV-LHDF-----------KTPVYRVSW 266 (288)
Q Consensus 202 ~~~~~~h~---~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~-~~~~-----------~~~i~~~~~ 266 (288)
+. ...+. ...+.+.|. + +...++...++.|.+-|+...+. .... +.+. ....+.++|
T Consensus 142 I~-Vg~~~~p~~~~nele~~-d----g~lyvn~~~~~~V~vID~~tg~V--~~~I~~~g~~~~~~~~~~~~~~v~nGIa~ 213 (266)
T 2iwa_A 142 HN-VKYNGHRVIRLNELEYI-N----GEVWANIWQTDCIARISAKDGTL--LGWILLPNLRKKLIDEGFRDIDVLNGIAW 213 (266)
T ss_dssp EE-CEETTEECCCEEEEEEE-T----TEEEEEETTSSEEEEEETTTCCE--EEEEECHHHHHHHHHTTCTTCCCEEEEEE
T ss_pred EE-ECCCCcccccceeEEEE-C----CEEEEecCCCCeEEEEECCCCcE--EEEEECCCcccccccccccccCceEEEEE
Confidence 11 11111 135677877 4 24556665678999999875421 1111 1111 124689999
Q ss_pred ecCCCEEEEEe-CCCcEEEeE
Q 036510 267 SLTGNILAVAD-GNNNVTLWE 286 (288)
Q Consensus 267 spdg~~l~s~~-~d~~v~~w~ 286 (288)
+|+++.|.+++ ..+++.+-+
T Consensus 214 ~~~~~~lfVTgk~~~~v~~i~ 234 (266)
T 2iwa_A 214 DQENKRIFVTGKLWPKLFEIK 234 (266)
T ss_dssp ETTTTEEEEEETTCSEEEEEE
T ss_pred cCCCCEEEEECCCCCeEEEEE
Confidence 99997655554 566776655
No 253
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.50 E-value=0.026 Score=45.50 Aligned_cols=192 Identities=7% Similarity=0.027 Sum_probs=106.3
Q ss_pred ccc--cceEEEEEcCCCCEEEEeeCC--CcEEEEEeCCCCceeeEEEeccccC-eEEEEecCCCCCCEEEEeeCCCcEEE
Q 036510 9 GHE--DTVHDVAMDYYGKRLATASSD--YSIKIIGVGNNTSQHLAKLSGHKGA-VWEVAWAHPKFGSILASCSFDGTVII 83 (288)
Q Consensus 9 ~h~--~~v~~~~~s~~g~~l~s~~~d--~~i~lwd~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~l~s~s~d~~v~i 83 (288)
.|. ...+++.|+. +.++.|.+.+ +.|+..|...+ +.+.++.-.... --.+... .+.++.....++.+.+
T Consensus 16 phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tg--kv~~~~~l~~~~fgeGi~~~---~~~ly~ltw~~~~v~v 89 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETG--RILQRAEVPPPYFGAGIVAW---RDRLIQLTWRNHEGFV 89 (243)
T ss_dssp ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTC--CEEEEEECCTTCCEEEEEEE---TTEEEEEESSSSEEEE
T ss_pred CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCC--CEEEEEeCCCCcceeEEEEe---CCEEEEEEeeCCEEEE
Confidence 454 5677899986 6777887775 48999998544 445554322221 1234443 2566777778999999
Q ss_pred eecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCC---CCeeEEEeCCC
Q 036510 84 WKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHP---VGVTSVSWAPS 160 (288)
Q Consensus 84 wd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~---~~v~~i~~~p~ 160 (288)
+|..+.. ...+++. ...-+.++ +++ +.+++ ...++.|.++|..+........+. .++ ..+..+.|. +
T Consensus 90 ~D~~tl~---~~~ti~~-~~~Gwglt--~dg-~~L~v-Sdgs~~l~~iDp~t~~~~~~I~V~-~~g~~~~~lNeLe~~-~ 159 (243)
T 3mbr_X 90 YDLATLT---PRARFRY-PGEGWALT--SDD-SHLYM-SDGTAVIRKLDPDTLQQVGSIKVT-AGGRPLDNLNELEWV-N 159 (243)
T ss_dssp EETTTTE---EEEEEEC-SSCCCEEE--ECS-SCEEE-ECSSSEEEEECTTTCCEEEEEECE-ETTEECCCEEEEEEE-T
T ss_pred EECCcCc---EEEEEeC-CCCceEEe--eCC-CEEEE-ECCCCeEEEEeCCCCeEEEEEEEc-cCCcccccceeeEEe-C
Confidence 9987654 3444542 22335555 443 34444 445889999998765432222211 111 123344443 1
Q ss_pred CCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeee-eeccc--------cCCcceEEEEecCCCCCCCcEEEEE
Q 036510 161 TAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDC-FPALQ--------MHTDWVRDVAWAPNLGLPKSTIASA 231 (288)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~--------~h~~~V~~v~~sp~~~~~~~~l~s~ 231 (288)
+.+.+..-.++.|.+.|..++.-.-.. ...+. .-.+--+.++|+|+. ..+++||
T Consensus 160 --------------G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~---~~lfVTG 222 (243)
T 3mbr_X 160 --------------GELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEH---DRLFVTG 222 (243)
T ss_dssp --------------TEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTT---TEEEEEE
T ss_pred --------------CEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCC---CEEEEEC
Confidence 234444434667888888776321110 00010 011245789999974 4677777
Q ss_pred eC
Q 036510 232 SE 233 (288)
Q Consensus 232 s~ 233 (288)
-.
T Consensus 223 K~ 224 (243)
T 3mbr_X 223 KR 224 (243)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 254
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.43 E-value=0.034 Score=45.21 Aligned_cols=211 Identities=12% Similarity=0.165 Sum_probs=120.7
Q ss_pred EEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEE
Q 036510 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNIS 129 (288)
Q Consensus 50 ~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~ 129 (288)
.+.+-...+.+++|.++ .+.+++....++.|...|.. +. ......+.+. ...-.|++.++ +.++++...++.+.
T Consensus 21 ~l~g~~~~lSGla~~~~-~~~L~aV~d~~~~I~~ld~~-g~-v~~~i~l~g~-~D~EGIa~~~~--g~~~vs~E~~~~l~ 94 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQ-SNTLFSTINKPAAIVEMTTN-GD-LIRTIPLDFV-KDLETIEYIGD--NQFVISDERDYAIY 94 (255)
T ss_dssp ECTTCCSCEEEEEEETT-TTEEEEEEETTEEEEEEETT-CC-EEEEEECSSC-SSEEEEEECST--TEEEEEETTTTEEE
T ss_pred ECCCcccCcceeEEeCC-CCEEEEEECCCCeEEEEeCC-CC-EEEEEecCCC-CChHHeEEeCC--CEEEEEECCCCcEE
Confidence 34455567999999864 35566667778888888875 43 2222222222 45778888765 56666666678899
Q ss_pred EEeecCCCCeeeEEee------ccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCce--eeee
Q 036510 130 VFTARADGGWDTSRID------QAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIW--KMDC 201 (288)
Q Consensus 130 i~d~~~~~~~~~~~~~------~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--~~~~ 201 (288)
++++............ ...+.....++|+|.+ +.|.++.+.....||....-.. .+..
T Consensus 95 ~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~--------------~~L~va~E~~p~~i~~~~g~~~~~~l~i 160 (255)
T 3qqz_A 95 VISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQD--------------HTFWFFKEKNPIEVYKVNGLLSSNELHI 160 (255)
T ss_dssp EEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTT--------------TEEEEEEESSSEEEEEEESTTCSSCCEE
T ss_pred EEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCC--------------CEEEEEECcCCceEEEEcccccCCceee
Confidence 9988665432111111 1234456788888876 4555555555666776652100 1111
Q ss_pred eec--c--ccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEee-ccc------cCeEEEEeecCC
Q 036510 202 FPA--L--QMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLH-DFK------TPVYRVSWSLTG 270 (288)
Q Consensus 202 ~~~--~--~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~-~~~------~~i~~~~~spdg 270 (288)
... + ..+.....++.++|.. +.+++.....+.+.++|.+.. ......+. +.. ...-.++|.|+|
T Consensus 161 ~~~~~~~~~~~~~d~S~l~~dp~t---g~lliLS~~s~~L~~~d~~g~--~~~~~~L~~g~~~l~~~~~qpEGia~d~~G 235 (255)
T 3qqz_A 161 SKDKALQRQFTLDDVSGAEFNQQK---NTLLVLSHESRALQEVTLVGE--VIGEMSLTKGSRGLSHNIKQAEGVAMDASG 235 (255)
T ss_dssp EECHHHHHTCCSSCCCEEEEETTT---TEEEEEETTTTEEEEECTTCC--EEEEEECSTTGGGCSSCCCSEEEEEECTTC
T ss_pred ecchhhccccccCCceeEEEcCCC---CeEEEEECCCCeEEEEcCCCC--EEEEEEcCCccCCcccccCCCCeeEECCCC
Confidence 110 1 1122246889999974 456666666778888876532 11111111 111 145789999999
Q ss_pred CEEEEEeCCCcEEEeE
Q 036510 271 NILAVADGNNNVTLWE 286 (288)
Q Consensus 271 ~~l~s~~~d~~v~~w~ 286 (288)
++.++ ++.+.+..++
T Consensus 236 ~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 236 NIYIV-SEPNRFYRFT 250 (255)
T ss_dssp CEEEE-ETTTEEEEEE
T ss_pred CEEEE-cCCceEEEEE
Confidence 86665 5666555443
No 255
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.30 E-value=0.056 Score=44.89 Aligned_cols=209 Identities=11% Similarity=0.054 Sum_probs=106.2
Q ss_pred eeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeC-
Q 036510 46 QHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSS- 124 (288)
Q Consensus 46 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~- 124 (288)
+.+.++... ....+++|.++ ++++++-..++.|..||... . . ...+. .......+++.|+ +.++++...
T Consensus 23 ~~~~~~p~~-~~pegia~~~~--g~lyv~d~~~~~I~~~d~~g-~-~--~~~~~-~~~~p~gia~~~d--G~l~vad~~~ 92 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPD--GTIFVTNHEVGEIVSITPDG-N-Q--QIHAT-VEGKVSGLAFTSN--GDLVATGWNA 92 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTT--SCEEEEETTTTEEEEECTTC-C-E--EEEEE-CSSEEEEEEECTT--SCEEEEEECT
T ss_pred eEeEeCCCC-CCcceEEECCC--CCEEEEeCCCCeEEEECCCC-c-e--EEEEe-CCCCceeEEEcCC--CcEEEEeccC
Confidence 344455332 34577899753 77778777889999998753 2 1 11222 2346788999887 444444432
Q ss_pred CC-cEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeee
Q 036510 125 DG-NISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFP 203 (288)
Q Consensus 125 d~-~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 203 (288)
++ .|..++...+ ........ ........+...+. ...+++-..++.|..+|...+........
T Consensus 93 ~~~~v~~~d~~~g-~~~~~~~~-~~~~~~~g~~~~~~--------------~~~~v~d~~~g~i~~~d~~~~~~~v~~~~ 156 (306)
T 2p4o_A 93 DSIPVVSLVKSDG-TVETLLTL-PDAIFLNGITPLSD--------------TQYLTADSYRGAIWLIDVVQPSGSIWLEH 156 (306)
T ss_dssp TSCEEEEEECTTS-CEEEEEEC-TTCSCEEEEEESSS--------------SEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred CcceEEEEcCCCC-eEEEEEeC-CCccccCcccccCC--------------CcEEEEECCCCeEEEEeCCCCcEeEEEEC
Confidence 22 3555555433 22111110 01011111211111 13344544567777777543211110000
Q ss_pred ------ccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEe
Q 036510 204 ------ALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVAD 277 (288)
Q Consensus 204 ------~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~ 277 (288)
.....-..-+.+ +|+. ..+.++-...+.|..+++...........+... .....+++.++|+++++..
T Consensus 157 ~~~~~~~~~~~~~~pngi--s~dg---~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~dG~l~va~~ 230 (306)
T 2p4o_A 157 PMLARSNSESVFPAANGL--KRFG---NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAFDVEGNLYGATH 230 (306)
T ss_dssp GGGSCSSTTCCSCSEEEE--EEET---TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEEBTTCCEEEECB
T ss_pred CccccccccCCCCcCCCc--CcCC---CEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CCCCCeEECCCCCEEEEeC
Confidence 001111123445 6763 245667677889999998642111111222222 2345689999998776666
Q ss_pred CCCcEEEeE
Q 036510 278 GNNNVTLWE 286 (288)
Q Consensus 278 ~d~~v~~w~ 286 (288)
..+.|.+++
T Consensus 231 ~~~~V~~~~ 239 (306)
T 2p4o_A 231 IYNSVVRIA 239 (306)
T ss_dssp TTCCEEEEC
T ss_pred CCCeEEEEC
Confidence 677888876
No 256
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.27 E-value=0.084 Score=46.38 Aligned_cols=157 Identities=9% Similarity=0.051 Sum_probs=86.0
Q ss_pred ceEEEEEcC-CCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCC-EEEEeeCCC----cEEEeec
Q 036510 13 TVHDVAMDY-YGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGS-ILASCSFDG----TVIIWKE 86 (288)
Q Consensus 13 ~v~~~~~s~-~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~s~d~----~v~iwd~ 86 (288)
....++++| ++..|..+...+.|+.+|.+.. .+..+.........++|+++ ++ ++++-..++ .+.+.+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~---~v~~~~~~~~~P~~ia~d~~--G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE---YVSTVYSGLSKVRTICWTHE--ADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTT---EEEEEECCCSCEEEEEECTT--SSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCC---EEEEEecCCCCcceEEEeCC--CCEEEEEeCCCCcccceEEEEeC
Confidence 346788997 3445555555477777776533 23333334455788999754 66 555544333 2333332
Q ss_pred CCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCce
Q 036510 87 GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGAL 166 (288)
Q Consensus 87 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~ 166 (288)
.+. +.....+.. ......++++|++ +.++++-...+.|..++..... ..... .......-..|.|+|++
T Consensus 213 -~g~-~~~~~~l~~-~~~p~giavdp~~-g~lyv~d~~~~~V~~~~~~~~~-~~~~~-~~~~~~~P~gia~~pdG----- 281 (430)
T 3tc9_A 213 -ESG-FKVITELTK-GQNCNGAETHPIN-GELYFNSWNAGQVFRYDFTTQE-TTPLF-TIQDSGWEFHIQFHPSG----- 281 (430)
T ss_dssp -GGT-SCSEEEEEE-CSSCCCEEECTTT-CCEEEEETTTTEEEEEETTTTE-EEEEE-ECSSSSCCEEEEECTTS-----
T ss_pred -CCc-eeeeeeecc-CCCceEEEEeCCC-CEEEEEECCCCEEEEEECCCCc-EEEEE-EcCCCCcceeEEEcCCC-----
Confidence 222 111122222 2345778888843 5656665566788888875331 10111 11111235678888887
Q ss_pred ecccccCCCc-eeEEeecCCcEEEEEEeC
Q 036510 167 VGSGFLDPVQ-KLCSGGCDNTVKVWKLYN 194 (288)
Q Consensus 167 ~~~~~~~~~~-~l~s~~~d~~i~iwd~~~ 194 (288)
+ ++++-...+.|..++...
T Consensus 282 ---------~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 282 ---------NYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp ---------SEEEEEETTTTEEEEEEEET
T ss_pred ---------CEEEEEECCCCEEEEEeCCc
Confidence 4 555666677888888764
No 257
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.04 E-value=0.065 Score=48.85 Aligned_cols=96 Identities=15% Similarity=0.097 Sum_probs=56.9
Q ss_pred CcEEEEEEeC--CceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCC------cccceEeec
Q 036510 185 NTVKVWKLYN--GIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGD------QWEGKVLHD 256 (288)
Q Consensus 185 ~~i~iwd~~~--~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~------~~~~~~~~~ 256 (288)
+.|.+.|.++ +.. .+..+.... ...++.++||++ ..++++..+.+|.++|+.+.+. .........
T Consensus 254 ~~V~VID~~~~~~~~---~~~~Ipvg~-~PhGv~~sPDGk---~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~ 326 (595)
T 1fwx_A 254 NGVKVVDGRKEASSL---FTRYIPIAN-NPHGCNMAPDKK---HLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE 326 (595)
T ss_dssp TTEEEEECSGGGCCS---SEEEEEEES-SCCCEEECTTSS---EEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEEC
T ss_pred CcEEEEeCcccCCce---eEEEEecCC-CceEEEEcCCCC---EEEEeCCCCCeEEEEECcccccccccccCcccceEEE
Confidence 4588888876 211 011111111 235689999862 3555666799999999984310 000111222
Q ss_pred --cccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 257 --FKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 257 --~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
.+....-++|+|||....+.-.|+.|.+|++
T Consensus 327 v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi 359 (595)
T 1fwx_A 327 PELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNI 359 (595)
T ss_dssp CBCCSCEEEEEECTTSEEEEEETTTTEEEEEEH
T ss_pred cCCCCCcceEEECCCCeEEEEEecCCcEEEEEh
Confidence 2345778999999944445557999999985
No 258
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.02 E-value=0.036 Score=51.74 Aligned_cols=51 Identities=14% Similarity=0.346 Sum_probs=33.6
Q ss_pred CCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 233 EDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 233 ~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
.++.|.-||+...+..+... ...+.....+...|.++.+++.|+.|+.||.
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~----~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~ 486 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVP----YPTHWNGGTLSTAGNLVFQGTAAGQMHAYSA 486 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEE----ESSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred ccceEEEEeCCCCcEEEEcc----CCCCCcCceeEeCCCEEEEECCcccchhhhh
Confidence 35789999886543222221 1233444455667888888999999999984
No 259
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.01 E-value=0.12 Score=43.18 Aligned_cols=200 Identities=10% Similarity=0.105 Sum_probs=99.0
Q ss_pred ceEEEEEcC-CCCEEEEeeCCCcEEEEEeCCCCceeeEEE-ec-cccCeEEEEecCCCCCCEEEEeeC------------
Q 036510 13 TVHDVAMDY-YGKRLATASSDYSIKIIGVGNNTSQHLAKL-SG-HKGAVWEVAWAHPKFGSILASCSF------------ 77 (288)
Q Consensus 13 ~v~~~~~s~-~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~-~~-h~~~v~~~~~~~~~~~~~l~s~s~------------ 77 (288)
...++++.+ +|++++ +...+.+..++......+.+... .+ .....+.+++.+. +|.+.++-..
T Consensus 81 ~p~gi~~~~~~g~l~v-~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~-~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYI-VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQR-TGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CEEEEEEETTTTEEEE-EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTT-TCCEEEEESCSSCCTTCHHHHH
T ss_pred CCceEEEcCCCCcEEE-EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecC-CCEEEEECCcccccccccceeh
Confidence 467889997 676555 44445566666532211112111 11 1124677888651 3677766432
Q ss_pred -----CCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCC--CeeeEEeeccCCC
Q 036510 78 -----DGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADG--GWDTSRIDQAHPV 150 (288)
Q Consensus 78 -----d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~--~~~~~~~~~~~~~ 150 (288)
++.|..+|..++.. ..+.......+.++|+|++ ..++++-...+.|..|++.... ...... . .+.
T Consensus 159 ~~~~~~g~v~~~d~~~~~~----~~~~~~~~~p~gia~~~dg-~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~--~-~~g 230 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKET----TLLLKELHVPGGAEVSADS-SFVLVAEFLSHQIVKYWLEGPKKGTAEVLV--K-IPN 230 (322)
T ss_dssp HHTCCCEEEEEEETTTTEE----EEEEEEESCCCEEEECTTS-SEEEEEEGGGTEEEEEESSSTTTTCEEEEE--E-CSS
T ss_pred cccCCCceEEEEeCCCCEE----EEeccCCccCcceEECCCC-CEEEEEeCCCCeEEEEECCCCcCCccceEE--e-CCC
Confidence 36677777654321 1111111245678999984 2344555666889999876421 111111 1 112
Q ss_pred CeeEEEeCCCCCCCceecccccCCCceeEEeec----------CCcEEEEEEeCCceeeeeeeccccC-CcceEEEEecC
Q 036510 151 GVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGC----------DNTVKVWKLYNGIWKMDCFPALQMH-TDWVRDVAWAP 219 (288)
Q Consensus 151 ~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~----------d~~i~iwd~~~~~~~~~~~~~~~~h-~~~V~~v~~sp 219 (288)
...+..++++ ++.++... .+.|..+|.. +. .+..+..-.+. -..+.++.+.
T Consensus 231 -P~gi~~d~~G--------------~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~-~~~~~~~~~g~~~~~~~~~~~~- 292 (322)
T 2fp8_A 231 -PGNIKRNADG--------------HFWVSSSEELDGNMHGRVDPKGIKFDEF-GN-ILEVIPLPPPFAGEHFEQIQEH- 292 (322)
T ss_dssp -EEEEEECTTS--------------CEEEEEEEETTSSTTSCEEEEEEEECTT-SC-EEEEEECCTTTTTSCCCEEEEE-
T ss_pred -CCCeEECCCC--------------CEEEEecCcccccccCCCccEEEEECCC-CC-EEEEEECCCCCccccceEEEEe-
Confidence 4556666654 44443322 2445556542 21 11111111111 2235566553
Q ss_pred CCCCCCcEEEEEeCCCcEEEEEeec
Q 036510 220 NLGLPKSTIASASEDGKVIIWTVAR 244 (288)
Q Consensus 220 ~~~~~~~~l~s~s~D~~i~iw~~~~ 244 (288)
+ +.+.++....+.|..+++..
T Consensus 293 ~----g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 293 D----GLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp T----TEEEEECSSCSEEEEEEC--
T ss_pred C----CEEEEeecCCCceEEEeccc
Confidence 2 35666666778888888764
No 260
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.88 E-value=0.18 Score=43.46 Aligned_cols=219 Identities=7% Similarity=-0.041 Sum_probs=113.8
Q ss_pred CcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEecc
Q 036510 33 YSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAP 112 (288)
Q Consensus 33 ~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p 112 (288)
..|+..+++.... ..+..-.....+++|.+. .+.++.+-...+.|..+++.... ....+.........+++.+
T Consensus 96 ~~I~~i~~~~~~~---~~~~~~~~~~~gl~~d~~-~~~ly~~D~~~~~I~r~~~~g~~---~~~~~~~~~~~p~glavd~ 168 (386)
T 3v65_B 96 IDIRQVLPHRSEY---TLLLNNLENAIALDFHHR-RELVFWSDVTLDRILRANLNGSN---VEEVVSTGLESPGGLAVDW 168 (386)
T ss_dssp SCEEEECTTSCCC---EEEECSCSCEEEEEEETT-TTEEEEEETTTTEEEEEETTSCC---EEEEECSSCSCCCCEEEET
T ss_pred ccceeeccCCCcE---EEEecCCCccEEEEEecC-CCeEEEEeCCCCcEEEEecCCCC---cEEEEeCCCCCccEEEEEe
Confidence 4566666644322 222222345788999753 36677776778889888875432 1112222223456777776
Q ss_pred CCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecC-CcEEEEE
Q 036510 113 HELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD-NTVKVWK 191 (288)
Q Consensus 113 ~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d-~~i~iwd 191 (288)
.. +.++.+-...+.|.+.++.... .. ......-.....|+.+|... .++++-... +.|...+
T Consensus 169 ~~-g~lY~~d~~~~~I~~~~~dg~~--~~-~l~~~~l~~P~giavdp~~g-------------~ly~td~~~~~~I~r~~ 231 (386)
T 3v65_B 169 VH-DKLYWTDSGTSRIEVANLDGAH--RK-VLLWQSLEKPRAIALHPMEG-------------TIYWTDWGNTPRIEASS 231 (386)
T ss_dssp TT-TEEEEEETTTTEEEECBTTSCS--CE-EEECSSCSCEEEEEEETTTT-------------EEEEEECSSSCEEEEEE
T ss_pred CC-CeEEEEcCCCCeEEEEeCCCCc--eE-EeecCCCCCCcEEEEEcCCC-------------eEEEeccCCCCEEEEEe
Confidence 53 4555555566777776654221 11 11122223456677777541 334444334 5666666
Q ss_pred EeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCC
Q 036510 192 LYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGN 271 (288)
Q Consensus 192 ~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~ 271 (288)
+..... +.+ ....-..-+.++|+|+. +.+.++=+..+.|..+++.... ....+.........+++ ..+.
T Consensus 232 ~dG~~~--~~~--~~~~~~~PnGlavd~~~---~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~P~giav-~~~~ 300 (386)
T 3v65_B 232 MDGSGR--RII--ADTHLFWPNGLTIDYAG---RRMYWVDAKHHVIERANLDGSH---RKAVISQGLPHPFAITV-FEDS 300 (386)
T ss_dssp TTSCSC--EEE--ECSSCSCEEEEEEEGGG---TEEEEEETTTTEEEEECTTSCS---CEEEECSSCSSEEEEEE-ETTE
T ss_pred CCCCCc--EEE--EECCCCCeeeEEEeCCC---CEEEEEECCCCEEEEEeCCCCe---eEEEEECCCCCceEEEE-ECCE
Confidence 543211 111 11122235789999864 3455666667778888764221 11222222234567777 3444
Q ss_pred EEEEEeCCCcEEEeE
Q 036510 272 ILAVADGNNNVTLWE 286 (288)
Q Consensus 272 ~l~s~~~d~~v~~w~ 286 (288)
.+++-...+.|..++
T Consensus 301 ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 301 LYWTDWHTKSINSAN 315 (386)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEeeCCCCeEEEEE
Confidence 444444556666654
No 261
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.86 E-value=0.16 Score=42.59 Aligned_cols=234 Identities=10% Similarity=0.141 Sum_probs=116.6
Q ss_pred ccceEEEEEcCCCCEEEEeeCCCcEEEEEeCC-CCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecC-C
Q 036510 11 EDTVHDVAMDYYGKRLATASSDYSIKIIGVGN-NTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEG-N 88 (288)
Q Consensus 11 ~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~-~ 88 (288)
...+..+.|++ ++.++ ++.++.+..- .+. .+.+.+.....+...++.+.+..+ +..++.+ .++.+ |... .
T Consensus 79 ~~~~~~i~~~~-~~~~~-~g~~g~i~~S-~DgG~tW~~~~~~~~~~~~~~~i~~~~~--~~~~~~~-~~g~v--~~S~Dg 150 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWI-VGEPPIMLHT-TDGGQSWSQIPLDPKLPGSPRLIKALGN--GSAEMIT-NVGAI--YRTKDS 150 (327)
T ss_dssp CCEEEEEEEET-TEEEE-EEETTEEEEE-SSTTSSCEECCCCTTCSSCEEEEEEEET--TEEEEEE-TTCCE--EEESST
T ss_pred CccEEEEEecC-CeEEE-EECCCeEEEE-CCCCCCceECccccCCCCCeEEEEEECC--CCEEEEe-CCccE--EEEcCC
Confidence 34678888875 44444 4556644332 222 223322211123345777877543 5555554 45544 3222 3
Q ss_pred CCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceec
Q 036510 89 SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG 168 (288)
Q Consensus 89 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~ 168 (288)
+.+|.... ..+...+..+.+.|+ +.+++.+ ..+.+..-+-..+..|.... ......+..+.+.|++
T Consensus 151 G~tW~~~~--~~~~~~~~~~~~~~~--~~~~~~g-~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g------- 216 (327)
T 2xbg_A 151 GKNWQALV--QEAIGVMRNLNRSPS--GEYVAVS-SRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDG------- 216 (327)
T ss_dssp TSSEEEEE--CSCCCCEEEEEECTT--SCEEEEE-TTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTS-------
T ss_pred CCCCEEee--cCCCcceEEEEEcCC--CcEEEEE-CCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCC-------
Confidence 45665432 234557889999886 5556555 45555332211133454432 2344567788777764
Q ss_pred ccccCCCceeEEeecCCcEEEEEEeCC-ceeeeeeecc-ccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCC
Q 036510 169 SGFLDPVQKLCSGGCDNTVKVWKLYNG-IWKMDCFPAL-QMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREG 246 (288)
Q Consensus 169 ~~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~ 246 (288)
. ++..+.++.+.+.+...+ .+. .+..- ..+...+.++.+.|+. . +..++.++.| .+. ....
T Consensus 217 -------~-~~~~~~~G~~~~s~~D~G~tW~--~~~~~~~~~~~~~~~v~~~~~~----~-~~~~g~~g~i-~~S-~DgG 279 (327)
T 2xbg_A 217 -------R-LWMIVNGGKIAFSDPDNSENWG--ELLSPLRRNSVGFLDLAYRTPN----E-VWLAGGAGAL-LCS-QDGG 279 (327)
T ss_dssp -------C-EEEEETTTEEEEEETTEEEEEC--CCBCTTSSCCSCEEEEEESSSS----C-EEEEESTTCE-EEE-SSTT
T ss_pred -------C-EEEEeCCceEEEecCCCCCeeE--eccCCcccCCcceEEEEecCCC----E-EEEEeCCCeE-EEe-CCCC
Confidence 3 344455676665531111 111 11100 0122347888888752 3 4444556766 332 2222
Q ss_pred CcccceEee---ccccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 247 DQWEGKVLH---DFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 247 ~~~~~~~~~---~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
..+. .+. .....++++.|.++++. ++++.+|+|.-++
T Consensus 280 ~tW~--~~~~~~~~~~~~~~v~~~~~~~~-~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 280 QTWQ--QDVDVKKVPSNFYKILFFSPDQG-FILGQKGILLRYV 319 (327)
T ss_dssp SSCE--ECGGGTTSSSCCCEEEEEETTEE-EEECSTTEEEEEC
T ss_pred cccE--EcCccCCCCCCeEEEEEECCCce-EEEcCCceEEEEc
Confidence 2222 111 12345788999866664 4555788776554
No 262
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.83 E-value=0.28 Score=46.35 Aligned_cols=239 Identities=17% Similarity=0.116 Sum_probs=126.2
Q ss_pred ccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEE-------eccccCeEEEEecCCCCCCEEEEeeCCCcEEE
Q 036510 11 EDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKL-------SGHKGAVWEVAWAHPKFGSILASCSFDGTVII 83 (288)
Q Consensus 11 ~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~i 83 (288)
...|.++...++|.+.+ |..++-+..++............ .-....|.++...+ ++. |-.|+.++-+..
T Consensus 312 ~~~v~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~--~g~-lWigt~~~Gl~~ 387 (781)
T 3v9f_A 312 NASARYIFQDSFNNIWI-GTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG--QGK-LWIGTDGGGINV 387 (781)
T ss_dssp SSCEEEEEECSSCCEEE-EEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT--TSC-EEEEEBSSCEEE
T ss_pred CCeEEEEEEeCCCCEEE-EecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC--CCC-EEEEeCCCcEEE
Confidence 46788888888887655 55566677777543322221100 01235688888653 354 445565566788
Q ss_pred eecCCCCceEEeE-EeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCC
Q 036510 84 WKEGNSNEWIKDH-VFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTA 162 (288)
Q Consensus 84 wd~~~~~~~~~~~-~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~ 162 (288)
++..+.. +.... .-......|.++...++ +. +-.|+.++-|..++.+++ .+.......-....|.++...+++
T Consensus 388 ~~~~~~~-~~~~~~~~~~~~~~v~~i~~d~~--g~-lWigt~~~Gl~~~~~~~~-~~~~~~~~~~~~~~v~~i~~d~~g- 461 (781)
T 3v9f_A 388 FENGKRV-AIYNKENRELLSNSVLCSLKDSE--GN-LWFGTYLGNISYYNTRLK-KFQIIELEKNELLDVRVFYEDKNK- 461 (781)
T ss_dssp EETTEEE-EECC-----CCCSBEEEEEECTT--SC-EEEEETTEEEEEECSSSC-EEEECCSTTTCCCCEEEEEECTTS-
T ss_pred EECCCCe-EEEccCCCCCCCcceEEEEECCC--CC-EEEEeccCCEEEEcCCCC-cEEEeccCCCCCCeEEEEEECCCC-
Confidence 8764321 11000 00123456888876554 44 444666666888876543 111110001123457777666543
Q ss_pred CCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccc---cCCcceEEEEecCCCCCCCcEEEEEeCCCcEEE
Q 036510 163 PGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQ---MHTDWVRDVAWAPNLGLPKSTIASASEDGKVII 239 (288)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~---~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~i 239 (288)
.|..|+. +-+.++|..++... ...... .....|.++...+++ .|-.|+.++-+..
T Consensus 462 --------------~lwigt~-~Gl~~~~~~~~~~~--~~~~~~~~~~~~~~i~~i~~d~~g-----~lWigt~~~Gl~~ 519 (781)
T 3v9f_A 462 --------------KIWIGTH-AGVFVIDLASKKVI--HHYDTSNSQLLENFVRSIAQDSEG-----RFWIGTFGGGVGI 519 (781)
T ss_dssp --------------EEEEEET-TEEEEEESSSSSCC--EEECTTTSSCSCSCEEEEEECTTC-----CEEEEESSSCEEE
T ss_pred --------------CEEEEEC-CceEEEeCCCCeEE--ecccCcccccccceeEEEEEcCCC-----CEEEEEcCCCEEE
Confidence 3555555 55778887654321 111111 113568888877653 3555565444666
Q ss_pred EEeecCCCcccceEee---cc-ccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 240 WTVAREGDQWEGKVLH---DF-KTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 240 w~~~~~~~~~~~~~~~---~~-~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
++.... . ...+. +. ...|.++...++|++.++. .+|.|..||
T Consensus 520 ~~~~~~--~--~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d 565 (781)
T 3v9f_A 520 YTPDMQ--L--VRKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPS 565 (781)
T ss_dssp ECTTCC--E--EEEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESC
T ss_pred EeCCCC--e--EEEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEEC
Confidence 765421 1 11111 11 2468899988999876654 456546655
No 263
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.75 E-value=0.2 Score=42.05 Aligned_cols=233 Identities=9% Similarity=0.128 Sum_probs=117.2
Q ss_pred ccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCC-CceeeEE-EeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCC
Q 036510 11 EDTVHDVAMDYYGKRLATASSDYSIKIIGVGNN-TSQHLAK-LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGN 88 (288)
Q Consensus 11 ~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~-~~~~~~~-~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~ 88 (288)
...+.+|.|.+.+..++ ++.++.|. ...+++ +.+.+.. .......+..+.|.+ +..++ ++.++.|.. ....
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~---~~~~~-~g~~g~i~~-S~Dg 107 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG---NEGWI-VGEPPIMLH-TTDG 107 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET---TEEEE-EEETTEEEE-ESST
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC---CeEEE-EECCCeEEE-ECCC
Confidence 45688888887777777 45666542 223322 2222211 112244678888852 44444 455665433 2223
Q ss_pred CCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecC-CCCeeeEEeeccCCCCeeEEEeCCCCCCCcee
Q 036510 89 SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARA-DGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV 167 (288)
Q Consensus 89 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~ 167 (288)
+.+|........+...+..+.+.++ +.+++.+ .++.| |-... +..|.... ......+..+.+.|++
T Consensus 108 G~tW~~~~~~~~~~~~~~~i~~~~~--~~~~~~~-~~g~v--~~S~DgG~tW~~~~--~~~~~~~~~~~~~~~~------ 174 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRLIKALGN--GSAEMIT-NVGAI--YRTKDSGKNWQALV--QEAIGVMRNLNRSPSG------ 174 (327)
T ss_dssp TSSCEECCCCTTCSSCEEEEEEEET--TEEEEEE-TTCCE--EEESSTTSSEEEEE--CSCCCCEEEEEECTTS------
T ss_pred CCCceECccccCCCCCeEEEEEECC--CCEEEEe-CCccE--EEEcCCCCCCEEee--cCCCcceEEEEEcCCC------
Confidence 4566543221123345677776654 4555555 45544 33332 44565432 2344567888888764
Q ss_pred cccccCCCceeEEeecCCcEE-EEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCC
Q 036510 168 GSGFLDPVQKLCSGGCDNTVK-VWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREG 246 (288)
Q Consensus 168 ~~~~~~~~~~l~s~~~d~~i~-iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~ 246 (288)
.+++.+ .++.+. -+|-....+. .+. ......+..+.+.|+. .+..++.++.+...+.. ..
T Consensus 175 --------~~~~~g-~~G~~~~S~d~gG~tW~--~~~--~~~~~~~~~~~~~~~g-----~~~~~~~~G~~~~s~~D-~G 235 (327)
T 2xbg_A 175 --------EYVAVS-SRGSFYSTWEPGQTAWE--PHN--RTTSRRLHNMGFTPDG-----RLWMIVNGGKIAFSDPD-NS 235 (327)
T ss_dssp --------CEEEEE-TTSSEEEEECTTCSSCE--EEE--CCSSSCEEEEEECTTS-----CEEEEETTTEEEEEETT-EE
T ss_pred --------cEEEEE-CCCcEEEEeCCCCCcee--ECC--CCCCCccceeEECCCC-----CEEEEeCCceEEEecCC-CC
Confidence 344444 344332 2221011121 111 1234457888888863 35566677877765311 01
Q ss_pred CcccceEee--ccccCeEEEEeecCCCEEEEEeCCCcEE
Q 036510 247 DQWEGKVLH--DFKTPVYRVSWSLTGNILAVADGNNNVT 283 (288)
Q Consensus 247 ~~~~~~~~~--~~~~~i~~~~~spdg~~l~s~~~d~~v~ 283 (288)
..+.....- .....+..+.|.|+++.++++ .++.|.
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i~ 273 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGALL 273 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCEE
T ss_pred CeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeEE
Confidence 111111000 011347889999988887766 466663
No 264
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.70 E-value=0.43 Score=45.19 Aligned_cols=238 Identities=8% Similarity=0.016 Sum_probs=130.7
Q ss_pred ccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEe----ccccCeEEEEecCCCCCCEEEEeeCCCcEEEeec
Q 036510 11 EDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS----GHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE 86 (288)
Q Consensus 11 ~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~ 86 (288)
...|.++..+++|++.+ |..++-+..++............. -....|.++...+ +|. |-.|+.++-+..|+.
T Consensus 309 ~~~i~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~--~g~-lWiGt~~~Gl~~~~~ 384 (795)
T 4a2l_A 309 QRSVRSIFMDSQGGMWL-GTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK--DKN-LWIGTNDGGLNLYNP 384 (795)
T ss_dssp SSCEEEEEECTTSCEEE-EESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT--TSC-EEEEESSSCEEEECT
T ss_pred CCcEEEEEEeCCcCEEE-EECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC--CCC-EEEEECCCCeEEEcC
Confidence 45788998898897655 666667777765322211111100 0234588888754 354 445677777888887
Q ss_pred CCCCceEEeEEe------ecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEee--ccCCCCeeEEEeC
Q 036510 87 GNSNEWIKDHVF------EDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRID--QAHPVGVTSVSWA 158 (288)
Q Consensus 87 ~~~~~~~~~~~~------~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~--~~~~~~v~~i~~~ 158 (288)
.++. +.....- ......|.++...++ +.++-.|+.++-|..|+.+.+. +...... .-....|.++...
T Consensus 385 ~~~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~--g~~lWigt~~~Gl~~~d~~~~~-~~~~~~~~~~l~~~~v~~i~~d 460 (795)
T 4a2l_A 385 ITQR-FTSYTLQEDESARGIGSNNIKAVYVDEK--KSLVYIGTHAGGLSILHRNSGQ-VENFNQRNSQLVNENVYAILPD 460 (795)
T ss_dssp TTCC-EEEECCC------CCSCSCEEEEEEETT--TTEEEEEETTTEEEEEETTTCC-EEEECTTTSCCSCSCEEEEEEC
T ss_pred CCCc-EEEEecCCCCcccCCCCccEEEEEEcCC--CCEEEEEeCcCceeEEeCCCCc-EEEeecCCCCcCCCeeEEEEEC
Confidence 5432 2111100 012356888876655 4435567777778899876542 2211100 0123457777766
Q ss_pred CCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeecc----ccCCcceEEEEecCCCCCCCcEEEEEeCC
Q 036510 159 PSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPAL----QMHTDWVRDVAWAPNLGLPKSTIASASED 234 (288)
Q Consensus 159 p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~----~~h~~~V~~v~~sp~~~~~~~~l~s~s~D 234 (288)
+++ .|..|+. +-+.+||..++... ..... ......|.++...+++ . |-.|+.
T Consensus 461 ~~g---------------~lwigt~-~Gl~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~i~~d~~g----~-lWigt~- 516 (795)
T 4a2l_A 461 GEG---------------NLWLGTL-SALVRFNPEQRSFT--TIEKEKDGTPVVSKQITTLFRDSHK----R-LWIGGE- 516 (795)
T ss_dssp SSS---------------CEEEEES-SCEEEEETTTTEEE--ECCBCTTCCBCCCCCEEEEEECTTC----C-EEEEES-
T ss_pred CCC---------------CEEEEec-CceeEEeCCCCeEE--EccccccccccCCceEEEEEECCCC----C-EEEEeC-
Confidence 554 3455555 45778886654321 11111 1123568888877653 3 444444
Q ss_pred CcEEEEEeecCCCcccceEe-----ec-cccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 235 GKVIIWTVAREGDQWEGKVL-----HD-FKTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 235 ~~i~iw~~~~~~~~~~~~~~-----~~-~~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
+.|..|+..... . ... .. ....|.++...++|++.+... . -+..||
T Consensus 517 ~Gl~~~~~~~~~--~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d 568 (795)
T 4a2l_A 517 EGLSVFKQEGLD--I--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFN 568 (795)
T ss_dssp SCEEEEEEETTE--E--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEE
T ss_pred CceEEEeCCCCe--E--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeEC
Confidence 568888876421 1 110 01 134688999999999766543 3 455555
No 265
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.67 E-value=0.25 Score=41.98 Aligned_cols=236 Identities=7% Similarity=-0.052 Sum_probs=121.7
Q ss_pred eEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceE
Q 036510 14 VHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWI 93 (288)
Q Consensus 14 v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~ 93 (288)
..+....+++.++++- ...|+..++++.. ...+........+++|.+. .+.++.+-...+.|..+++.....
T Consensus 36 ~~C~~~~~~~~ll~~~--~~~I~~i~~~g~~---~~~~~~~~~~~~~l~~d~~-~~~ly~~D~~~~~I~r~~~~g~~~-- 107 (349)
T 3v64_C 36 RSCKALGPEPVLLFAN--RIDIRQVLPHRSE---YTLLLNNLENAIALDFHHR-RELVFWSDVTLDRILRANLNGSNV-- 107 (349)
T ss_dssp SCEEESSSCCEEEEEC--BSCEEEECTTSCC---EEEEECSCSCEEEEEEETT-TTEEEEEETTTTEEEEEETTSCSC--
T ss_pred CcccccccCceeEeec--ccceEEEeCCCCe---eEEeecCCCceEEEEEecc-ccEEEEEeccCCceEEEecCCCCc--
Confidence 3444444444333332 3346655654332 2222222344688999753 356667766788898888754331
Q ss_pred EeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccC
Q 036510 94 KDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLD 173 (288)
Q Consensus 94 ~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~ 173 (288)
...+.........+++.+.. +.++.+-...+.|.+.++..... . ......-.....|+++|...
T Consensus 108 -~~~~~~~~~~p~glavd~~~-g~ly~~d~~~~~I~~~~~dG~~~--~-~l~~~~l~~P~~iavdp~~g----------- 171 (349)
T 3v64_C 108 -EEVVSTGLESPGGLAVDWVH-DKLYWTDSGTSRIEVANLDGAHR--K-VLLWQSLEKPRAIALHPMEG----------- 171 (349)
T ss_dssp -EEEECSSCSCCCEEEEETTT-TEEEEEETTTTEEEEEETTSCSC--E-EEECTTCSCEEEEEEETTTT-----------
T ss_pred -eEEEeCCCCCccEEEEecCC-CeEEEEcCCCCeEEEEcCCCCce--E-EEEeCCCCCcceEEEecCcC-----------
Confidence 11122222345678887653 45556666667888887653211 1 11222223456777777541
Q ss_pred CCceeEEeecC-CcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccce
Q 036510 174 PVQKLCSGGCD-NTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGK 252 (288)
Q Consensus 174 ~~~~l~s~~~d-~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~ 252 (288)
.++++-... +.|...++..... +.+ ....-..-+.++++|+. +.+.++=+..+.|..+++.-.. ...
T Consensus 172 --~ly~td~~~~~~I~r~~~dG~~~--~~~--~~~~~~~PnGla~d~~~---~~lY~aD~~~~~I~~~~~dG~~---~~~ 239 (349)
T 3v64_C 172 --TIYWTDWGNTPRIEASSMDGSGR--RII--ADTHLFWPNGLTIDYAG---RRMYWVDAKHHVIERANLDGSH---RKA 239 (349)
T ss_dssp --EEEEEECSSSCEEEEEETTSCSC--EES--CCSSCSCEEEEEEETTT---TEEEEEETTTTEEEEEETTSCS---CEE
T ss_pred --eEEEeccCCCCEEEEEeCCCCCc--EEE--EECCCCCcceEEEeCCC---CEEEEEECCCCEEEEEeCCCCc---eEE
Confidence 344454444 6676666543211 111 11122335789999864 3456666667788888865321 112
Q ss_pred EeeccccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 253 VLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 253 ~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
.+.........+++ ..+..+++-...+.|...+
T Consensus 240 ~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 240 VISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp EECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred EEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEE
Confidence 22222234567777 3444444443456665554
No 266
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.67 E-value=0.46 Score=45.03 Aligned_cols=226 Identities=13% Similarity=0.069 Sum_probs=125.8
Q ss_pred ccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEE------eccccCeEEEEecCCCCCCEEEEeeCCCcEEEe
Q 036510 11 EDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKL------SGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW 84 (288)
Q Consensus 11 ~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~------~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iw 84 (288)
...|.++...++|++.+ |..++-+..|+...........- .-....|.++...+ ++.+|-.|+.++-+..+
T Consensus 356 ~~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~--~g~~lWigt~~~Gl~~~ 432 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE--KKSLVYIGTHAGGLSIL 432 (795)
T ss_dssp CSSEEEEEECTTSCEEE-EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET--TTTEEEEEETTTEEEEE
T ss_pred CCeeEEEEECCCCCEEE-EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC--CCCEEEEEeCcCceeEE
Confidence 45688888888887665 66666677887643322111100 01235688888754 36636666777778899
Q ss_pred ecCCCCceEEeEEee-----cCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEee----ccCCCCeeEE
Q 036510 85 KEGNSNEWIKDHVFE-----DHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRID----QAHPVGVTSV 155 (288)
Q Consensus 85 d~~~~~~~~~~~~~~-----~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~----~~~~~~v~~i 155 (288)
+..++. . ..+. .....|.++...++ +.+.+ |+. +-|..|+..++ .+...... .-....|.++
T Consensus 433 d~~~~~-~---~~~~~~~~~l~~~~v~~i~~d~~--g~lwi-gt~-~Gl~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i 503 (795)
T 4a2l_A 433 HRNSGQ-V---ENFNQRNSQLVNENVYAILPDGE--GNLWL-GTL-SALVRFNPEQR-SFTTIEKEKDGTPVVSKQITTL 503 (795)
T ss_dssp ETTTCC-E---EEECTTTSCCSCSCEEEEEECSS--SCEEE-EES-SCEEEEETTTT-EEEECCBCTTCCBCCCCCEEEE
T ss_pred eCCCCc-E---EEeecCCCCcCCCeeEEEEECCC--CCEEE-Eec-CceeEEeCCCC-eEEEccccccccccCCceEEEE
Confidence 876543 1 1121 12456888876654 45443 444 45888886543 22111110 0122457777
Q ss_pred EeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeee---eccccCCcceEEEEecCCCCCCCcEEEEEe
Q 036510 156 SWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCF---PALQMHTDWVRDVAWAPNLGLPKSTIASAS 232 (288)
Q Consensus 156 ~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~---~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s 232 (288)
...+++ .+..|+. +-+..||..++.. ... ..-......|.++...+++ . |-.|+
T Consensus 504 ~~d~~g---------------~lWigt~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g----~-lWigT 560 (795)
T 4a2l_A 504 FRDSHK---------------RLWIGGE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNG----I-IWVGT 560 (795)
T ss_dssp EECTTC---------------CEEEEES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTS----C-EEEEE
T ss_pred EECCCC---------------CEEEEeC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCC----C-EEEEe
Confidence 766654 3455555 4588889876532 111 0111234568898877753 3 44444
Q ss_pred CCCcEEEEEeecCCCcccceEee---cc-ccCeEEEEeecCCCEEEEE
Q 036510 233 EDGKVIIWTVAREGDQWEGKVLH---DF-KTPVYRVSWSLTGNILAVA 276 (288)
Q Consensus 233 ~D~~i~iw~~~~~~~~~~~~~~~---~~-~~~i~~~~~spdg~~l~s~ 276 (288)
.. -|..||.... . ...+. +. ...|.++...++|++.+++
T Consensus 561 ~~-Gl~~~d~~~~--~--~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t 603 (795)
T 4a2l_A 561 RE-GFYCFNEKDK--Q--IKRYNTTNGLPNNVVYGILEDSFGRLWLST 603 (795)
T ss_dssp SS-CEEEEETTTT--E--EEEECGGGTCSCSCEEEEEECTTSCEEEEE
T ss_pred CC-CceeECCCCC--c--EEEeCCCCCCchhheEEEEECCCCCEEEEc
Confidence 44 5777876432 1 11111 12 2468889988999887665
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.55 E-value=0.36 Score=42.36 Aligned_cols=243 Identities=7% Similarity=0.006 Sum_probs=121.0
Q ss_pred ceEEEEEcCC---CCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCC---Cc-EEEee
Q 036510 13 TVHDVAMDYY---GKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFD---GT-VIIWK 85 (288)
Q Consensus 13 ~v~~~~~s~~---g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d---~~-v~iwd 85 (288)
....++++|+ |+++++ ...+.|+.++.... . +..+.+.......++++++ ++++++-... .. +...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~-D~~~~I~~id~~~g--~-v~~~~~~~~~P~giavd~d--G~lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWV-GQRDAFRHVDFVNQ--Y-VDIKTTNIGQCADVNFTLN--GDMVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp CCCEEEECTTTTTCEEEEE-CBTSCEEEEETTTT--E-EEEECCCCSCEEEEEECTT--CCEEEEECCSCTTSEEEEEEC
T ss_pred CCceEEEccccCCCEEEEE-eCCCCEEEEECCCC--E-EEEeecCCCCccEEEECCC--CCEEEEcCCCCcccceEEEEE
Confidence 3467889984 555544 43378888876432 2 3333334455789999764 6666655422 22 22222
Q ss_pred cCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCc
Q 036510 86 EGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGA 165 (288)
Q Consensus 86 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~ 165 (288)
.. .. +.....+.. ......++++|++ +.++++-...+.|+.++...+...... ...+....-..+.|+|++.
T Consensus 214 ~~-~~-~~~~~~~~~-~~~P~giavd~~~-G~lyv~d~~~~~V~~~d~~~g~~~~~~-~~~~~~~~~~~ia~dpdG~--- 285 (433)
T 4hw6_A 214 RA-SG-FTERLSLCN-ARGAKTCAVHPQN-GKIYYTRYHHAMISSYDPATGTLTEEE-VMMDTKGSNFHIVWHPTGD--- 285 (433)
T ss_dssp GG-GT-TCCEEEEEE-CSSBCCCEECTTT-CCEEECBTTCSEEEEECTTTCCEEEEE-EECSCCSSCEEEEECTTSS---
T ss_pred CC-CC-eeccccccc-cCCCCEEEEeCCC-CeEEEEECCCCEEEEEECCCCeEEEEE-eccCCCCCcccEEEeCCCC---
Confidence 21 11 111112221 2345667888842 555555555677888876533210111 1111111223588888761
Q ss_pred eecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccC---------------CcceEEEEe---------cCCC
Q 036510 166 LVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMH---------------TDWVRDVAW---------APNL 221 (288)
Q Consensus 166 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h---------------~~~V~~v~~---------sp~~ 221 (288)
.+.++-...+.|..+|.......+.....+.+. -..-..+++ .++
T Consensus 286 ----------~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~- 354 (433)
T 4hw6_A 286 ----------WAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDE- 354 (433)
T ss_dssp ----------EEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCC-
T ss_pred ----------EEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCC-
Confidence 245565666778887764211000000011110 112345777 333
Q ss_pred CCCCcEEEEEeCCCcEEEEEeecCCCcccceEeecc------------------ccCeEEEEee-cCCCEEEEEeCCCcE
Q 036510 222 GLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDF------------------KTPVYRVSWS-LTGNILAVADGNNNV 282 (288)
Q Consensus 222 ~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~------------------~~~i~~~~~s-pdg~~l~s~~~d~~v 282 (288)
+.+.++=.....|+.++..- ....+.+. -.....++++ ++|.++++=..++.|
T Consensus 355 ---g~lyvaD~~n~~I~~~~~~G-----~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rI 426 (433)
T 4hw6_A 355 ---YDFYFCDRDSHTVRVLTPEG-----RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRV 426 (433)
T ss_dssp ---EEEEEEETTTTEEEEECTTS-----EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEE
T ss_pred ---CcEEEEECCCCEEEEECCCC-----CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEE
Confidence 34556656667788876421 01111110 0236789999 556555544567788
Q ss_pred EEeEcC
Q 036510 283 TLWEEA 288 (288)
Q Consensus 283 ~~w~~~ 288 (288)
+..+.+
T Consensus 427 r~i~~e 432 (433)
T 4hw6_A 427 RKIAPE 432 (433)
T ss_dssp EEEEEC
T ss_pred EEEecC
Confidence 887753
No 268
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.49 E-value=0.26 Score=45.00 Aligned_cols=50 Identities=10% Similarity=0.164 Sum_probs=29.1
Q ss_pred CCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 234 DGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 234 D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
++.|..||+...+..+... ...++.+......+..+.+++.|+.|+.||.
T Consensus 443 ~g~l~a~D~~tG~~~W~~~----~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~ 492 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKW----EKFAAWGGTLYTKGGLVWYATLDGYLKALDN 492 (571)
T ss_dssp CEEEEEECTTTCCEEEEEE----ESSCCCSBCEEETTTEEEEECTTSEEEEEET
T ss_pred CCeEEEEECCCCCEEEEec----CCCCccceeEEECCCEEEEEcCCCeEEEEEC
Confidence 4678888776543222211 1122222333445667777889999999984
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.49 E-value=0.36 Score=41.60 Aligned_cols=180 Identities=7% Similarity=-0.029 Sum_probs=93.9
Q ss_pred eCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEE
Q 036510 76 SFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSV 155 (288)
Q Consensus 76 s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 155 (288)
+....|+..++.... .. ..+. .......++|++.+ +.++.+-...+.|..+++.... .. ............+
T Consensus 93 ~~~~~I~~i~~~~~~-~~--~~~~-~~~~~~gl~~d~~~-~~ly~~D~~~~~I~r~~~~g~~-~~--~~~~~~~~~p~gl 164 (386)
T 3v65_B 93 ANRIDIRQVLPHRSE-YT--LLLN-NLENAIALDFHHRR-ELVFWSDVTLDRILRANLNGSN-VE--EVVSTGLESPGGL 164 (386)
T ss_dssp ECBSCEEEECTTSCC-CE--EEEC-SCSCEEEEEEETTT-TEEEEEETTTTEEEEEETTSCC-EE--EEECSSCSCCCCE
T ss_pred ecCccceeeccCCCc-EE--EEec-CCCccEEEEEecCC-CeEEEEeCCCCcEEEEecCCCC-cE--EEEeCCCCCccEE
Confidence 344677777775433 11 1122 23457889999764 5555555566777777765321 11 1111111112334
Q ss_pred EeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCC-
Q 036510 156 SWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASED- 234 (288)
Q Consensus 156 ~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D- 234 (288)
++++.. +.+.++-...+.|.+.++..... +.+ +......-+.+++.|.. +.++++-...
T Consensus 165 avd~~~-------------g~lY~~d~~~~~I~~~~~dg~~~--~~l--~~~~l~~P~giavdp~~---g~ly~td~~~~ 224 (386)
T 3v65_B 165 AVDWVH-------------DKLYWTDSGTSRIEVANLDGAHR--KVL--LWQSLEKPRAIALHPME---GTIYWTDWGNT 224 (386)
T ss_dssp EEETTT-------------TEEEEEETTTTEEEECBTTSCSC--EEE--ECSSCSCEEEEEEETTT---TEEEEEECSSS
T ss_pred EEEeCC-------------CeEEEEcCCCCeEEEEeCCCCce--EEe--ecCCCCCCcEEEEEcCC---CeEEEeccCCC
Confidence 444332 14455555566777766543321 111 11122335788888864 3455554444
Q ss_pred CcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeC-CCcEEEeE
Q 036510 235 GKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADG-NNNVTLWE 286 (288)
Q Consensus 235 ~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~-d~~v~~w~ 286 (288)
+.|...++.-. ....++...-.....++|+|++..|..++. .+.|..++
T Consensus 225 ~~I~r~~~dG~---~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 225 PRIEASSMDGS---GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 274 (386)
T ss_dssp CEEEEEETTSC---SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEEC
T ss_pred CEEEEEeCCCC---CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEe
Confidence 56666665421 111222222345789999998888877765 45676665
No 270
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.25 E-value=0.36 Score=39.13 Aligned_cols=204 Identities=9% Similarity=0.037 Sum_probs=112.3
Q ss_pred cccccceEEEEEcCCCCEEE-EeeCCCcEEEEEeCCCCceeeEEE--eccccCeEEEEecCCCCCCEEEEeeCCCcEEEe
Q 036510 8 TGHEDTVHDVAMDYYGKRLA-TASSDYSIKIIGVGNNTSQHLAKL--SGHKGAVWEVAWAHPKFGSILASCSFDGTVIIW 84 (288)
Q Consensus 8 ~~h~~~v~~~~~s~~g~~l~-s~~~d~~i~lwd~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iw 84 (288)
.|-.+.+.+++++|+++.|. ....++.|...|.+ ++.+..+ .+. ...-+|++.. ++.++++.-.++.+.++
T Consensus 23 ~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~---g~v~~~i~l~g~-~D~EGIa~~~--~g~~~vs~E~~~~l~~~ 96 (255)
T 3qqz_A 23 AGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN---GDLIRTIPLDFV-KDLETIEYIG--DNQFVISDERDYAIYVI 96 (255)
T ss_dssp TTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT---CCEEEEEECSSC-SSEEEEEECS--TTEEEEEETTTTEEEEE
T ss_pred CCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC---CCEEEEEecCCC-CChHHeEEeC--CCEEEEEECCCCcEEEE
Confidence 34556799999999765554 46666766666664 3444444 332 4567788864 36666665567888888
Q ss_pred ecCCCCceEEeEEe--e----cCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecC---CCCeeeEEe----eccCCCC
Q 036510 85 KEGNSNEWIKDHVF--E----DHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARA---DGGWDTSRI----DQAHPVG 151 (288)
Q Consensus 85 d~~~~~~~~~~~~~--~----~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~---~~~~~~~~~----~~~~~~~ 151 (288)
++............ . ..+.....|+|+|.. +.++++...+ ...+|.++. ......... ...+...
T Consensus 97 ~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~-~~L~va~E~~-p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d 174 (255)
T 3qqz_A 97 SLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQD-HTFWFFKEKN-PIEVYKVNGLLSSNELHISKDKALQRQFTLDD 174 (255)
T ss_dssp EECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTT-TEEEEEEESS-SEEEEEEESTTCSSCCEEEECHHHHHTCCSSC
T ss_pred EcCCCCeeeeeeeeccccccccccCCcceEEEeCCC-CEEEEEECcC-CceEEEEcccccCCceeeecchhhccccccCC
Confidence 87554421111111 1 133456899999974 3555544444 445555431 111111110 0112234
Q ss_pred eeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccc-cC------CcceEEEEecCCCCCC
Q 036510 152 VTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQ-MH------TDWVRDVAWAPNLGLP 224 (288)
Q Consensus 152 v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~h------~~~V~~v~~sp~~~~~ 224 (288)
...+.++|... ++++.+...+.+-.+|..... .....+. +. -..=..|+|.|++
T Consensus 175 ~S~l~~dp~tg-------------~lliLS~~s~~L~~~d~~g~~---~~~~~L~~g~~~l~~~~~qpEGia~d~~G--- 235 (255)
T 3qqz_A 175 VSGAEFNQQKN-------------TLLVLSHESRALQEVTLVGEV---IGEMSLTKGSRGLSHNIKQAEGVAMDASG--- 235 (255)
T ss_dssp CCEEEEETTTT-------------EEEEEETTTTEEEEECTTCCE---EEEEECSTTGGGCSSCCCSEEEEEECTTC---
T ss_pred ceeEEEcCCCC-------------eEEEEECCCCeEEEEcCCCCE---EEEEEcCCccCCcccccCCCCeeEECCCC---
Confidence 67788888752 567777777778888854321 1122232 11 1124778999874
Q ss_pred CcEEEEEeCCCcEEEE
Q 036510 225 KSTIASASEDGKVIIW 240 (288)
Q Consensus 225 ~~~l~s~s~D~~i~iw 240 (288)
++.++ |..+.+..+
T Consensus 236 -~lyIv-sE~n~~y~f 249 (255)
T 3qqz_A 236 -NIYIV-SEPNRFYRF 249 (255)
T ss_dssp -CEEEE-ETTTEEEEE
T ss_pred -CEEEE-cCCceEEEE
Confidence 44444 666544444
No 271
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.25 E-value=0.34 Score=42.32 Aligned_cols=117 Identities=17% Similarity=0.212 Sum_probs=71.7
Q ss_pred CeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCcee---------eeee-eccc----cCCcceEEEE
Q 036510 151 GVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWK---------MDCF-PALQ----MHTDWVRDVA 216 (288)
Q Consensus 151 ~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~---------~~~~-~~~~----~h~~~V~~v~ 216 (288)
.+..+..+|++ ++||..+ +..|.|..+-.+... +++. ..+. ....+|..|.
T Consensus 67 ~i~qlvlSpsG--------------~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVl 131 (452)
T 3pbp_A 67 DTFHVISSTSG--------------DLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVL 131 (452)
T ss_dssp TTCEEEECTTS--------------SEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEE
T ss_pred ceeEEEECCCC--------------CEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEE
Confidence 46778888876 5666553 567888777522110 1110 1111 1356799999
Q ss_pred ecCCCCCCCcEEEEEeCCCcEEEEEeecCCC-cc-cceEeeccc-----cCeEEEEeecCCCEEEEEe--CCCcEE
Q 036510 217 WAPNLGLPKSTIASASEDGKVIIWTVAREGD-QW-EGKVLHDFK-----TPVYRVSWSLTGNILAVAD--GNNNVT 283 (288)
Q Consensus 217 ~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~-~~-~~~~~~~~~-----~~i~~~~~spdg~~l~s~~--~d~~v~ 283 (288)
|+|-+. .+..||+-..|++||+||+..... +. .++....++ ..|.+++|.++|=.|...+ ..|.|.
T Consensus 132 WHPl~~-~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 132 FHPKSY-RDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp ECTTBG-GGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEE
T ss_pred eccccC-CCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEE
Confidence 999642 356899999999999999986221 11 000001112 4688999999887677655 666664
No 272
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.87 E-value=0.72 Score=39.32 Aligned_cols=178 Identities=11% Similarity=0.032 Sum_probs=91.1
Q ss_pred CCCcEEEeecCCCCceEEeEEeec-----CCCceeEEEeccC--CCCeEEEEEeC--CCcEEEEeecCCCCeee-EEeec
Q 036510 77 FDGTVIIWKEGNSNEWIKDHVFED-----HKSSVNSIDWAPH--ELGLCLACGSS--DGNISVFTARADGGWDT-SRIDQ 146 (288)
Q Consensus 77 ~d~~v~iwd~~~~~~~~~~~~~~~-----h~~~v~~l~~~p~--~~~~~l~sg~~--d~~i~i~d~~~~~~~~~-~~~~~ 146 (288)
.+|.|.++|+.+.+.......+.+ .......+++.++ +...++++... +..+.+|++..+..... ....+
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 689999999864321111112222 1235667777664 22345555544 56788888876433221 11222
Q ss_pred cCC-CCeeEEEeCCCCCCCceecccccCCCceeEEee---------------cCCcEEEEEEeCCceeeeeeeccccCCc
Q 036510 147 AHP-VGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGG---------------CDNTVKVWKLYNGIWKMDCFPALQMHTD 210 (288)
Q Consensus 147 ~~~-~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~---------------~d~~i~iwd~~~~~~~~~~~~~~~~h~~ 210 (288)
+.. .....+...+++ ++.++.. ....=++|-+..+. .+. +...-.
T Consensus 161 g~~~~~pND~~v~~~G--------------~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~--~~~---~~~~l~ 221 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPE--------------HFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND--VRV---VAEGFD 221 (355)
T ss_dssp CTTCSSEEEEEEEETT--------------EEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTC--CEE---EEEEES
T ss_pred cCCCCCCceEEEeCCC--------------CEEecCCcEeCCcccccchhhccCCccEEEEEECCe--EEE---eecCCc
Confidence 221 345667666665 2222221 01223344443331 111 111112
Q ss_pred ceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeec-CCCEEEEEe
Q 036510 211 WVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSL-TGNILAVAD 277 (288)
Q Consensus 211 ~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~sp-dg~~l~s~~ 277 (288)
.-+.++|+||. ..+.++-+..+.|..|++.........+.+ ......-.++..+ +|++.+++.
T Consensus 222 ~pNGia~spDg---~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 222 FANGINISPDG---KYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp SEEEEEECTTS---SEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEE
T ss_pred ccCcceECCCC---CEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEec
Confidence 34889999985 245566667889999998743222122222 3344566788888 588877553
No 273
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.78 E-value=0.64 Score=38.03 Aligned_cols=227 Identities=14% Similarity=0.202 Sum_probs=105.3
Q ss_pred CCCEEEEee-CC-----CcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCC-----CcEEEeecCCCC
Q 036510 22 YGKRLATAS-SD-----YSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFD-----GTVIIWKEGNSN 90 (288)
Q Consensus 22 ~g~~l~s~~-~d-----~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d-----~~v~iwd~~~~~ 90 (288)
++.+++.|+ .+ ..+.+||........+..+.........+.. ++.+++.|+.+ ..+.++|+.+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSL----HDRIYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE----TTEEEEECCBCSSCBCCCEEEEETTCCT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEE----CCEEEEEcCCCCCccCceEEEEECCCCC
Confidence 456667676 33 3577777654333332222211111122222 25777877765 468888886543
Q ss_pred --ceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC-----CcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCC
Q 036510 91 --EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD-----GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAP 163 (288)
Q Consensus 91 --~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~ 163 (288)
.|.....++..+..-.++.+ + +.+++.|+.+ +.+.+||+.++ .|............-..+..
T Consensus 90 ~~~W~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~------ 158 (301)
T 2vpj_A 90 DGVWYSVAPMNVRRGLAGATTL--G--DMIYVSGGFDGSRRHTSMERYDPNID-QWSMLGDMQTAREGAGLVVA------ 158 (301)
T ss_dssp TCCCEEECCCSSCCBSCEEEEE--T--TEEEEECCBCSSCBCCEEEEEETTTT-EEEEEEECSSCCBSCEEEEE------
T ss_pred CCeeEECCCCCCCccceeEEEE--C--CEEEEEcccCCCcccceEEEEcCCCC-eEEECCCCCCCcccceEEEE------
Confidence 15444333322222222222 2 4566667644 35777877643 34332211100000011111
Q ss_pred CceecccccCCCceeEEeecC-----CcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCC----
Q 036510 164 GALVGSGFLDPVQKLCSGGCD-----NTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASED---- 234 (288)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D---- 234 (288)
++.+++.|+.+ +.+.++|..+..|... ..+......-..+.+ + +.+++.|+.+
T Consensus 159 ----------~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~--~~~p~~r~~~~~~~~--~----~~i~v~GG~~~~~~ 220 (301)
T 2vpj_A 159 ----------SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV--TPMATKRSGAGVALL--N----DHIYVVGGFDGTAH 220 (301)
T ss_dssp ----------TTEEEEECCBCSSCBCCCEEEEETTTTEEEEE--CCCSSCCBSCEEEEE--T----TEEEEECCBCSSSB
T ss_pred ----------CCEEEEECCCCCCcccceEEEEeCCCCcEEeC--CCCCcccccceEEEE--C----CEEEEEeCCCCCcc
Confidence 12456666654 4577888877665421 122111111122232 1 3567777764
Q ss_pred -CcEEEEEeecCCCcccceEeeccc---cCeEEEEeecCCCEEEEEeCC-----CcEEEeEc
Q 036510 235 -GKVIIWTVAREGDQWEGKVLHDFK---TPVYRVSWSLTGNILAVADGN-----NNVTLWEE 287 (288)
Q Consensus 235 -~~i~iw~~~~~~~~~~~~~~~~~~---~~i~~~~~spdg~~l~s~~~d-----~~v~~w~~ 287 (288)
..+.+||+... .+.. +.... ..-..+. -++++++.|+.+ +.|.+||.
T Consensus 221 ~~~v~~yd~~~~--~W~~--~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 221 LSSVEAYNIRTD--SWTT--VTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp CCCEEEEETTTT--EEEE--ECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEET
T ss_pred cceEEEEeCCCC--cEEE--CCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcC
Confidence 45888887643 2221 11111 1111222 377888888765 35666663
No 274
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.74 E-value=0.36 Score=44.96 Aligned_cols=62 Identities=15% Similarity=0.190 Sum_probs=36.9
Q ss_pred CCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCc----------e-eEEEeccCCCCeEEEEEeCCCcEEEEeecCCC
Q 036510 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSS----------V-NSIDWAPHELGLCLACGSSDGNISVFTARADG 137 (288)
Q Consensus 69 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~----------v-~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~ 137 (288)
+..+..++.++.|.-+|..+++. ...+...... + ..+.+. +..++.++.|+.|..+|.+++.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~---~W~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~v~~~dg~l~alD~~tG~ 138 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKE---LWRYDPEVAKVKARTSCCDAVNRGVALW----GDKVYVGTLDGRLIALDAKTGK 138 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCE---EEEECCCCCGGGGGGCTTCSCCCCCEEE----BTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEECCCCeEEEEECCCChh---ceEECCCCCccccccccccCCccceEEE----CCEEEEEcCCCEEEEEECCCCC
Confidence 34666677788899999887763 2222211110 0 112221 2346677889999999988764
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.71 E-value=0.74 Score=38.29 Aligned_cols=181 Identities=10% Similarity=-0.079 Sum_probs=95.3
Q ss_pred CcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCC-eeeEEeeccCCCCeeEEEe
Q 036510 79 GTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGG-WDTSRIDQAHPVGVTSVSW 157 (288)
Q Consensus 79 ~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~v~~i~~ 157 (288)
..|+..++..... . ..+. ......+++|++.+ +.++.+-...+.|..+++..... ..........-.....+++
T Consensus 10 ~~I~~i~~~~~~~-~--~~~~-~~~~p~g~~~d~~~-~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glav 84 (316)
T 1ijq_A 10 HEVRKMTLDRSEY-T--SLIP-NLRNVVALDTEVAS-NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 84 (316)
T ss_dssp SSEEEEETTSCCC-E--EEEC-SCSSEEEEEEETTT-TEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred CeEEEEECCCcce-E--ehhc-CCCceEEEEEEeCC-CEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEE
Confidence 5688888765432 1 1222 23467899999864 55566666678888887753100 0011111111112344554
Q ss_pred CCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCC-Cc
Q 036510 158 APSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASED-GK 236 (288)
Q Consensus 158 ~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D-~~ 236 (288)
++.+ +++.++-...+.|.+.|+...... ..+ ......-+.+++.|.. +.++++-... +.
T Consensus 85 d~~~-------------~~ly~~d~~~~~I~~~~~~g~~~~-~~~---~~~~~~P~~iavdp~~---g~ly~~d~~~~~~ 144 (316)
T 1ijq_A 85 DWIH-------------SNIYWTDSVLGTVSVADTKGVKRK-TLF---RENGSKPRAIVVDPVH---GFMYWTDWGTPAK 144 (316)
T ss_dssp ETTT-------------TEEEEEETTTTEEEEEETTSSSEE-EEE---ECTTCCEEEEEEETTT---TEEEEEECSSSCE
T ss_pred eecC-------------CeEEEEECCCCEEEEEeCCCCceE-EEE---ECCCCCcceEEeCCCC---CEEEEEccCCCCe
Confidence 4332 144556566778888886543211 111 1122235788998864 3455554433 56
Q ss_pred EEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeC-CCcEEEeEc
Q 036510 237 VIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADG-NNNVTLWEE 287 (288)
Q Consensus 237 i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~-d~~v~~w~~ 287 (288)
|...++.-. .........-.....++++|++..|..++. .+.|..+|.
T Consensus 145 I~~~~~dG~---~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~ 193 (316)
T 1ijq_A 145 IKKGGLNGV---DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 193 (316)
T ss_dssp EEEEETTSC---CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEEcCCCC---CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEec
Confidence 666665321 111122222246789999999888887764 457777763
No 276
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.55 E-value=0.79 Score=37.52 Aligned_cols=227 Identities=15% Similarity=0.231 Sum_probs=102.3
Q ss_pred CCEEEEeeCC----CcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCC-----CcEEEeecCCCCceE
Q 036510 23 GKRLATASSD----YSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFD-----GTVIIWKEGNSNEWI 93 (288)
Q Consensus 23 g~~l~s~~~d----~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d-----~~v~iwd~~~~~~~~ 93 (288)
+..++.|+.+ ..+.+||........+..+......-..+.. ++.+++.|+.+ ..+.++|..+ .+|.
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~~d~~~-~~W~ 90 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM----AGLVFAVGGFNGSLRVRTVDSYDPVK-DQWT 90 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE----TTEEEEESCBCSSSBCCCEEEEETTT-TEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE----CCEEEEEeCcCCCccccceEEECCCC-Ccee
Confidence 4566666654 3577787754433322222111111112222 26777887755 3577888765 3454
Q ss_pred EeEEeecCCCceeEEEeccCCCCeEEEEEeCCC-----cEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceec
Q 036510 94 KDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG-----NISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG 168 (288)
Q Consensus 94 ~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~-----~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~ 168 (288)
....++..+..-..+.+ + +.+++.|+.++ .+..||+.++ .|...............+..
T Consensus 91 ~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~----------- 154 (302)
T 2xn4_A 91 SVANMRDRRSTLGAAVL--N--GLLYAVGGFDGSTGLSSVEAYNIKSN-EWFHVAPMNTRRSSVGVGVV----------- 154 (302)
T ss_dssp EECCCSSCCBSCEEEEE--T--TEEEEEEEECSSCEEEEEEEEETTTT-EEEEECCCSSCCBSCEEEEE-----------
T ss_pred eCCCCCccccceEEEEE--C--CEEEEEcCCCCCccCceEEEEeCCCC-eEeecCCCCCcccCceEEEE-----------
Confidence 44333322222222222 2 45666666553 4667776543 34322111000000011111
Q ss_pred ccccCCCceeEEeecC-------CcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCC-----c
Q 036510 169 SGFLDPVQKLCSGGCD-------NTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG-----K 236 (288)
Q Consensus 169 ~~~~~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~-----~ 236 (288)
++.+++.|+.+ ..+-+||..+..|... ..+......-..+.+ . +.+++.|+.++ .
T Consensus 155 -----~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~--~~~p~~r~~~~~~~~-~-----~~iyv~GG~~~~~~~~~ 221 (302)
T 2xn4_A 155 -----GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYI--AEMSTRRSGAGVGVL-N-----NLLYAVGGHDGPLVRKS 221 (302)
T ss_dssp -----TTEEEEECCEETTTTEECCCEEEEETTTTEEEEE--CCCSSCCBSCEEEEE-T-----TEEEEECCBSSSSBCCC
T ss_pred -----CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEEC--CCCccccccccEEEE-C-----CEEEEECCCCCCcccce
Confidence 12445555542 3477888877655421 111111111122222 2 35777777643 5
Q ss_pred EEEEEeecCCCcccceEeeccccC-eEEEEeecCCCEEEEEeCCC-----cEEEeEc
Q 036510 237 VIIWTVAREGDQWEGKVLHDFKTP-VYRVSWSLTGNILAVADGNN-----NVTLWEE 287 (288)
Q Consensus 237 i~iw~~~~~~~~~~~~~~~~~~~~-i~~~~~spdg~~l~s~~~d~-----~v~~w~~ 287 (288)
+.+||+... .+.. +.....+ -.......++++++.|+.++ .|.+||.
T Consensus 222 ~~~yd~~~~--~W~~--~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 222 VEVYDPTTN--AWRQ--VADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp EEEEETTTT--EEEE--ECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred EEEEeCCCC--CEee--CCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcC
Confidence 788887643 2221 1111110 00111223788888887653 4777774
No 277
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.43 E-value=1 Score=38.07 Aligned_cols=179 Identities=7% Similarity=-0.012 Sum_probs=95.2
Q ss_pred CCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEE
Q 036510 77 FDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVS 156 (288)
Q Consensus 77 ~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 156 (288)
....|+..++.... . ...+. .......++|++.+ +.++.+-...+.|..+++..... . ............++
T Consensus 51 ~~~~I~~i~~~g~~-~--~~~~~-~~~~~~~l~~d~~~-~~ly~~D~~~~~I~r~~~~g~~~-~--~~~~~~~~~p~gla 122 (349)
T 3v64_C 51 NRIDIRQVLPHRSE-Y--TLLLN-NLENAIALDFHHRR-ELVFWSDVTLDRILRANLNGSNV-E--EVVSTGLESPGGLA 122 (349)
T ss_dssp CBSCEEEECTTSCC-E--EEEEC-SCSCEEEEEEETTT-TEEEEEETTTTEEEEEETTSCSC-E--EEECSSCSCCCEEE
T ss_pred cccceEEEeCCCCe-e--EEeec-CCCceEEEEEeccc-cEEEEEeccCCceEEEecCCCCc-e--EEEeCCCCCccEEE
Confidence 34557776664332 2 11222 23457899999864 55555555667787777653321 1 11111111233455
Q ss_pred eCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCC-C
Q 036510 157 WAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASED-G 235 (288)
Q Consensus 157 ~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D-~ 235 (288)
+.+.. +.+.++-...+.|.+.++..... +.+ +......-+.+++.|.. +.++.+-... +
T Consensus 123 vd~~~-------------g~ly~~d~~~~~I~~~~~dG~~~--~~l--~~~~l~~P~~iavdp~~---g~ly~td~~~~~ 182 (349)
T 3v64_C 123 VDWVH-------------DKLYWTDSGTSRIEVANLDGAHR--KVL--LWQSLEKPRAIALHPME---GTIYWTDWGNTP 182 (349)
T ss_dssp EETTT-------------TEEEEEETTTTEEEEEETTSCSC--EEE--ECTTCSCEEEEEEETTT---TEEEEEECSSSC
T ss_pred EecCC-------------CeEEEEcCCCCeEEEEcCCCCce--EEE--EeCCCCCcceEEEecCc---CeEEEeccCCCC
Confidence 54433 14455666667788887654321 111 11122334788999864 3455555554 6
Q ss_pred cEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeC-CCcEEEeE
Q 036510 236 KVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADG-NNNVTLWE 286 (288)
Q Consensus 236 ~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~-d~~v~~w~ 286 (288)
.|...++.-.. ....+...-.....++++|++..|..++. .+.|..++
T Consensus 183 ~I~r~~~dG~~---~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 183 RIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 231 (349)
T ss_dssp EEEEEETTSCS---CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEEEeCCCCC---cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEe
Confidence 67666654211 11111222235789999998888877765 45677665
No 278
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.40 E-value=0.54 Score=39.57 Aligned_cols=157 Identities=8% Similarity=0.038 Sum_probs=87.4
Q ss_pred ceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeecc----CC--CCeeEEEe---CCCCCCCceecccccCC
Q 036510 104 SVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQA----HP--VGVTSVSW---APSTAPGALVGSGFLDP 174 (288)
Q Consensus 104 ~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~----~~--~~v~~i~~---~p~~~~~~~~~~~~~~~ 174 (288)
--.+++|++.. +.++++.-..+.|..|+...+... ... ... .+ ..+..|.| .|++
T Consensus 14 yPE~~~wd~~~-g~~~vs~l~~g~V~~~~~~~~~~~-~~~-~~~~s~~g~~~~~~sGl~~~~~D~~g------------- 77 (334)
T 2p9w_A 14 TPEDTIYDRTR-QVFYQSNLYKGRIEVYNPKTQSHF-NVV-IDGASSNGDGEQQMSGLSLLTHDNSK------------- 77 (334)
T ss_dssp CCSCEEEETTT-TEEEEEETTTTEEEEECTTTCCEE-EEC-CTTTCCSSCCSEEEEEEEESSSSSCC-------------
T ss_pred CCcCccCcCCC-CEEEEEeccCCEEEEEcCCCCeEE-EEe-cCCccccCCCcceeeEEEEeccCCCC-------------
Confidence 34578998753 565555557899999987533211 111 111 11 12456777 5654
Q ss_pred CceeEEee-------------cCCcEEEEEEe---CCceeeeeeeccc----c------CC-cceEEEEecCCCCCCCcE
Q 036510 175 VQKLCSGG-------------CDNTVKVWKLY---NGIWKMDCFPALQ----M------HT-DWVRDVAWAPNLGLPKST 227 (288)
Q Consensus 175 ~~~l~s~~-------------~d~~i~iwd~~---~~~~~~~~~~~~~----~------h~-~~V~~v~~sp~~~~~~~~ 227 (288)
++++... .++.+..+|+. ++... ....|. + .. ...+.+...+++ +.
T Consensus 78 -rL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~--~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G----na 150 (334)
T 2p9w_A 78 -RLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPV--WSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG----NS 150 (334)
T ss_dssp -EEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCS--EEEESHHHHHHHHHHHSSCCEEEEEEEECTTS----CE
T ss_pred -cEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEE--EEecCccccccccccccccccCCceeEECCCC----CE
Confidence 4444322 36778889987 44211 011111 1 11 237888888874 55
Q ss_pred EEEEeCC-CcEEEEEeecCCCcccceEee-cc-----ccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 228 IASASED-GKVIIWTVAREGDQWEGKVLH-DF-----KTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 228 l~s~s~D-~~i~iw~~~~~~~~~~~~~~~-~~-----~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
-|+++.- +.|...+..- .. ..... .. .--.+.++++|||+.|++....+.+.-+|+
T Consensus 151 YVt~s~~~~~I~rV~pdG--~~--~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~ 213 (334)
T 2p9w_A 151 YVAFALGMPAIARVSADG--KT--VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDV 213 (334)
T ss_dssp EEEEEESSCEEEEECTTS--CC--EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEEC
T ss_pred EEeCCCCCCeEEEEeCCC--CE--EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcC
Confidence 6667766 5544443321 11 11110 11 112568999999999999877888887775
No 279
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.28 E-value=1.5 Score=39.10 Aligned_cols=161 Identities=13% Similarity=0.114 Sum_probs=85.8
Q ss_pred ceEEEEEcCC--CCEEEEeeCCCcEEEEEeCCCCceeeEEEec----cccCeEEEEe-------cCCCCCCEEEEeeCCC
Q 036510 13 TVHDVAMDYY--GKRLATASSDYSIKIIGVGNNTSQHLAKLSG----HKGAVWEVAW-------AHPKFGSILASCSFDG 79 (288)
Q Consensus 13 ~v~~~~~s~~--g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~----h~~~v~~~~~-------~~~~~~~~l~s~s~d~ 79 (288)
....++|+|. ++++++-...+.|++.|.... .+.++.. .......|+| +++ +..|..+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~---~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~--G~~lyvad~~~ 214 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNR---MLSSPLNINTIPTNRIRSIAFNKKIEGYADE--AEYMIVAIDYD 214 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTT---EEEEEECCTTSSCSBEEEEEECCCBTTTBCT--TCEEEEEECCC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCC---EEEEEEccCccccCCCcEEEEeecccccCCC--CCEEEEEeCCC
Confidence 3467899983 455555444456777776432 2333321 1234788999 754 66444444332
Q ss_pred -------cEEEeecCCCCceEE---eEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeec-------CCCCeee-
Q 036510 80 -------TVIIWKEGNSNEWIK---DHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTAR-------ADGGWDT- 141 (288)
Q Consensus 80 -------~v~iwd~~~~~~~~~---~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~-------~~~~~~~- 141 (288)
.|.+.+......+.. ...+... .....++++|++ +.++++--..+.|..+|+. .+..+.+
T Consensus 215 ~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~-g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~ 292 (496)
T 3kya_A 215 GKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPIN-GELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPI 292 (496)
T ss_dssp TTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTT-CCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCB
T ss_pred CCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCC-CeEEEEECCCCEEEEEecccccccccCceeeccc
Confidence 255555333122210 0122211 234677888864 5666666677889999987 3332100
Q ss_pred --------EEee-ccCCCCeeEEEeCCCCCCCceecccccCCCc-eeEEeecCCcEEEEEEeC
Q 036510 142 --------SRID-QAHPVGVTSVSWAPSTAPGALVGSGFLDPVQ-KLCSGGCDNTVKVWKLYN 194 (288)
Q Consensus 142 --------~~~~-~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~ 194 (288)
.... ......-..|+|+|++ + +.++-.....|+.+|...
T Consensus 293 ~~~~~g~~~~l~~~~~~~~p~~ia~~p~G--------------~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 293 VKNNPNTFKQLFTIADPSWEFQIFIHPTG--------------KYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp GGGCTTTEEEEEECSSSSCCEEEEECTTS--------------SEEEEEETTTTEEEEEEEET
T ss_pred ccccccccceeEecCCCCCceEEEEcCCC--------------CEEEEEeCCCCEEEEEecCC
Confidence 0111 1112234678888887 4 345555667788877643
No 280
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.83 E-value=2.8 Score=39.79 Aligned_cols=183 Identities=10% Similarity=-0.074 Sum_probs=94.7
Q ss_pred eCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCC-eeeEEeeccCCCCeeE
Q 036510 76 SFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGG-WDTSRIDQAHPVGVTS 154 (288)
Q Consensus 76 s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~v~~ 154 (288)
+....|+..++.... + ..+......+..|+|++.. +.++.+-...+.|+.+++..... .....+....-.....
T Consensus 401 an~~~Ir~i~l~~~~-~---~~l~~~~~~~~gl~~d~~~-~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~G 475 (791)
T 3m0c_C 401 TNRHEVRKMTLDRSE-Y---TSLIPNLRNVVALDTEVAS-NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 475 (791)
T ss_dssp ECBSSEEEECTTSCC-C---EEEECSCSSEEEEEEETTT-TEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred ccccceeEeeccCCc-c---eeeecCCCceEEEeecccC-CeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcce
Confidence 445667777665432 2 1122234567889998854 55555656667787777653210 0011111111122334
Q ss_pred EEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCC
Q 036510 155 VSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASED 234 (288)
Q Consensus 155 i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D 234 (288)
|++.+.+ .++.++-...+.|.+.++...... .++ ......-+.|++.|.. +.++++-...
T Consensus 476 LAvD~~~-------------~~LY~tD~~~~~I~v~~ldG~~~~-~l~---~~~l~~P~gIaVDp~~---g~LYwtD~g~ 535 (791)
T 3m0c_C 476 LAVDWIH-------------SNIYWTDSVLGTVSVADTKGVKRK-TLF---RENGSKPRAIVVDPVH---GFMYWTDWGT 535 (791)
T ss_dssp EEEETTT-------------TEEEEEETTTTEEEEEETTSSSEE-EEE---ECTTCCEEEEEEETTT---TEEEEEECSS
T ss_pred eeeeecC-------------CcEEEEecCCCeEEEEeCCCCeEE-EEE---eCCCCCcceEEEecCC---CCEEEecCCC
Confidence 4444333 145566667778888887543211 111 1222335788998864 3344444333
Q ss_pred -CcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeC-CCcEEEeE
Q 036510 235 -GKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADG-NNNVTLWE 286 (288)
Q Consensus 235 -~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~-d~~v~~w~ 286 (288)
..|...++.-. ....++..--.....|++.|.+..|+.++. .+.|...+
T Consensus 536 ~~~I~~~~~dG~---~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d 586 (791)
T 3m0c_C 536 PAKIKKGGLNGV---DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSID 586 (791)
T ss_dssp SCEEEEEETTSC---CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCeEEEEecCCC---ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEe
Confidence 56666655321 111222222246789999998888888865 34566655
No 281
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.81 E-value=1.6 Score=38.99 Aligned_cols=158 Identities=11% Similarity=0.095 Sum_probs=83.5
Q ss_pred eeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeecc---CCCCeeEEEe-------CCCCCCCceecccccCC
Q 036510 105 VNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQA---HPVGVTSVSW-------APSTAPGALVGSGFLDP 174 (288)
Q Consensus 105 v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~---~~~~v~~i~~-------~p~~~~~~~~~~~~~~~ 174 (288)
...|+|.|.+.+.++++-...+.|++.|+..+. .. ..... .......|.| ++++
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~-v~--~l~~~~~~~~~~p~~ia~~~~~~~~d~~G------------- 204 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRM-LS--SPLNINTIPTNRIRSIAFNKKIEGYADEA------------- 204 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTE-EE--EEECCTTSSCSBEEEEEECCCBTTTBCTT-------------
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCE-EE--EEEccCccccCCCcEEEEeecccccCCCC-------------
Confidence 457888884224555555545677777776432 11 11111 1224677888 7765
Q ss_pred Cc-eeEEeecCC------cEEEEEEeC-Cceee----eeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEe
Q 036510 175 VQ-KLCSGGCDN------TVKVWKLYN-GIWKM----DCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV 242 (288)
Q Consensus 175 ~~-~l~s~~~d~------~i~iwd~~~-~~~~~----~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~ 242 (288)
. ++++--.++ .|.+.+... +.+.. ..+..+ .| ...++.+|+. +.++++-..++.|..+|+
T Consensus 205 -~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~---p~giavdp~~---g~LYvtd~~~g~V~r~d~ 276 (496)
T 3kya_A 205 -EYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQ---CNGATIHPIN---GELYFNSYEKGQVFRLDL 276 (496)
T ss_dssp -CEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SC---CCCEEECTTT---CCEEEEETTTTEEEEECH
T ss_pred -CEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CC---ceEEEEcCCC---CeEEEEECCCCEEEEEec
Confidence 4 344433321 255555332 12210 111111 12 3566788853 356777778888999998
Q ss_pred e-------cCCC-----cc----cceEee-ccccCeEEEEeecCCCEEEEEeC-CCcEEEeE
Q 036510 243 A-------REGD-----QW----EGKVLH-DFKTPVYRVSWSLTGNILAVADG-NNNVTLWE 286 (288)
Q Consensus 243 ~-------~~~~-----~~----~~~~~~-~~~~~i~~~~~spdg~~l~s~~~-d~~v~~w~ 286 (288)
. .... +. ...+.. +.....+.++|+|+|++|..++. ...|+.++
T Consensus 277 ~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid 338 (496)
T 3kya_A 277 VDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSD 338 (496)
T ss_dssp HHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEe
Confidence 6 2211 00 001111 11245689999999997666654 55676644
No 282
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.69 E-value=1.5 Score=35.93 Aligned_cols=105 Identities=10% Similarity=0.097 Sum_probs=53.2
Q ss_pred CCEEEEeeCC--CcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCC----CcEEEeecCCCCceEEeE
Q 036510 23 GKRLATASSD--YSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFD----GTVIIWKEGNSNEWIKDH 96 (288)
Q Consensus 23 g~~l~s~~~d--~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d----~~v~iwd~~~~~~~~~~~ 96 (288)
+.+++-|+.+ ..+.+||........+..+......-..+.. ++.+++.|+.+ ..+.++|+.+ +.|....
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~d~~~-~~W~~~~ 86 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW----DNVVYILGGSQLFPIKRMDCYNVVK-DSWYSKL 86 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE----TTEEEEECCBSSSBCCEEEEEETTT-TEEEEEE
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE----CCEEEEEeCCCCCCcceEEEEeCCC-CeEEECC
Confidence 3455556653 5677888754433333222211111122222 25677888765 6777888765 3454443
Q ss_pred EeecCCCceeEEEeccCCCCeEEEEEeCC------CcEEEEeecCC
Q 036510 97 VFEDHKSSVNSIDWAPHELGLCLACGSSD------GNISVFTARAD 136 (288)
Q Consensus 97 ~~~~h~~~v~~l~~~p~~~~~~l~sg~~d------~~i~i~d~~~~ 136 (288)
.++..+..-..+.+ + +.+++.|+.+ +.+.+||+.++
T Consensus 87 ~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~d~~~~ 128 (306)
T 3ii7_A 87 GPPTPRDSLAACAA--E--GKIYTSGGSEVGNSALYLFECYDTRTE 128 (306)
T ss_dssp CCSSCCBSCEEEEE--T--TEEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred CCCccccceeEEEE--C--CEEEEECCCCCCCcEeeeEEEEeCCCC
Confidence 33322222222222 2 4566777655 45778887653
No 283
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.58 E-value=1.9 Score=36.69 Aligned_cols=103 Identities=14% Similarity=0.110 Sum_probs=59.4
Q ss_pred eeEEeec--CCcEEEEEEeCCceeeeeeeccccCC-cceEEEEecCCCCCCCcEEEEEeC---C------------CcEE
Q 036510 177 KLCSGGC--DNTVKVWKLYNGIWKMDCFPALQMHT-DWVRDVAWAPNLGLPKSTIASASE---D------------GKVI 238 (288)
Q Consensus 177 ~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~h~-~~V~~v~~sp~~~~~~~~l~s~s~---D------------~~i~ 238 (288)
+++.-.. +.+|-+|++..+......+..+.+.. ...+++.+.+++ ...++..- | ..=+
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G----~fyvt~~~~ftd~~~~~~e~~~~~~~g~ 204 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPE----HFYATNDHYFIDPYLKSWEMHLGLAWSF 204 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETT----EEEEEESCSCSSHHHHHHHHHTTCCCEE
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCC----CEEecCCcEeCCcccccchhhccCCccE
Confidence 4454444 56788999876433334444444332 247888888873 44554431 1 2334
Q ss_pred EEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeC-CCcEEEeEc
Q 036510 239 IWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADG-NNNVTLWEE 287 (288)
Q Consensus 239 iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~-d~~v~~w~~ 287 (288)
+|.+... +.+.+.+.-...+.++|||||+.|++++. .+.|+.|++
T Consensus 205 vyr~d~~----~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~ 250 (355)
T 3sre_A 205 VTYYSPN----DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEK 250 (355)
T ss_dssp EEEECTT----CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred EEEEECC----eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEE
Confidence 5544321 12222222234688999999998888864 577888774
No 284
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.45 E-value=1.2 Score=38.89 Aligned_cols=117 Identities=17% Similarity=0.154 Sum_probs=73.2
Q ss_pred ceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCC---c-------eeeEEEec------cccCeEEEEecCCC-CCCEEEEe
Q 036510 13 TVHDVAMDYYGKRLATASSDYSIKIIGVGNNT---S-------QHLAKLSG------HKGAVWEVAWAHPK-FGSILASC 75 (288)
Q Consensus 13 ~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~---~-------~~~~~~~~------h~~~v~~~~~~~~~-~~~~l~s~ 75 (288)
.|..+..||+|++||-. .+.+|.|-.+..+. . ...+++.- ...+|..+.|.|-. .+..|+.-
T Consensus 67 ~i~qlvlSpsG~lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLF-NDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEE-CSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEe-cCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 57789999999988866 45688888875221 0 01223321 24679999996532 35689999
Q ss_pred eCCCcEEEeecCCCCceEE-e-E---Ee--ecCCCceeEEEeccCCCCeEEEEEeCCCcEEE
Q 036510 76 SFDGTVIIWKEGNSNEWIK-D-H---VF--EDHKSSVNSIDWAPHELGLCLACGSSDGNISV 130 (288)
Q Consensus 76 s~d~~v~iwd~~~~~~~~~-~-~---~~--~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i 130 (288)
-.|++|++||+......+. . + .+ ......|.+++|.+++-..++++....|-|+-
T Consensus 146 tsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp ETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred ecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 9999999999875321111 0 0 11 12335788899988644444444446666643
No 285
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=94.41 E-value=2.4 Score=37.08 Aligned_cols=201 Identities=7% Similarity=0.030 Sum_probs=97.8
Q ss_pred eEEEEecCC-CCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC---Cc-EEEEe
Q 036510 58 VWEVAWAHP-KFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD---GN-ISVFT 132 (288)
Q Consensus 58 v~~~~~~~~-~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d---~~-i~i~d 132 (288)
...++|.++ ..+.++++-.. +.|+.++..++. ...+.........+++++++ .++++.... .. +..++
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~----v~~~~~~~~~P~giavd~dG--~lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQY----VDIKTTNIGQCADVNFTLNG--DMVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-SCEEEEETTTTE----EEEECCCCSCEEEEEECTTC--CEEEEECCSCTTSEEEEEEC
T ss_pred CceEEEccccCCCEEEEEeCC-CCEEEEECCCCE----EEEeecCCCCccEEEECCCC--CEEEEcCCCCcccceEEEEE
Confidence 457888652 23555555443 888888876543 22333334457899999884 444443211 11 22222
Q ss_pred ecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcce
Q 036510 133 ARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWV 212 (288)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V 212 (288)
.. ..+....... .-.....+.++|.. +.+.++-..++.|..+|..++... ..+... +....-
T Consensus 214 ~~--~~~~~~~~~~-~~~~P~giavd~~~-------------G~lyv~d~~~~~V~~~d~~~g~~~-~~~~~~-~~~~~~ 275 (433)
T 4hw6_A 214 RA--SGFTERLSLC-NARGAKTCAVHPQN-------------GKIYYTRYHHAMISSYDPATGTLT-EEEVMM-DTKGSN 275 (433)
T ss_dssp GG--GTTCCEEEEE-ECSSBCCCEECTTT-------------CCEEECBTTCSEEEEECTTTCCEE-EEEEEC-SCCSSC
T ss_pred CC--CCeecccccc-ccCCCCEEEEeCCC-------------CeEEEEECCCCEEEEEECCCCeEE-EEEecc-CCCCCc
Confidence 21 1111000000 01112334445522 244445555667877776544221 111111 111223
Q ss_pred EEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCc-ccceEeecc---------------ccCeEEEEe---------e
Q 036510 213 RDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQ-WEGKVLHDF---------------KTPVYRVSW---------S 267 (288)
Q Consensus 213 ~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~-~~~~~~~~~---------------~~~i~~~~~---------s 267 (288)
..++|+|++ ..+.++-.....|+.++....... .....+.+. -.....+++ .
T Consensus 276 ~~ia~dpdG---~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd 352 (433)
T 4hw6_A 276 FHIVWHPTG---DWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE 352 (433)
T ss_dssp EEEEECTTS---SEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS
T ss_pred ccEEEeCCC---CEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC
Confidence 469999984 225666667788888876532111 000111110 023567888 5
Q ss_pred cCCCEEEEEeCCCcEEEeE
Q 036510 268 LTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 268 pdg~~l~s~~~d~~v~~w~ 286 (288)
++|.++++=..++.|+.++
T Consensus 353 ~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 353 DEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp CCEEEEEEETTTTEEEEEC
T ss_pred CCCcEEEEECCCCEEEEEC
Confidence 6666665555567777765
No 286
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.28 E-value=1.8 Score=35.29 Aligned_cols=189 Identities=19% Similarity=0.255 Sum_probs=87.1
Q ss_pred CCCEEEEeeCC-----CcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCC-----cEEEeecCCCCc
Q 036510 22 YGKRLATASSD-----YSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDG-----TVIIWKEGNSNE 91 (288)
Q Consensus 22 ~g~~l~s~~~d-----~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~-----~v~iwd~~~~~~ 91 (288)
++++++.|+.+ ..+.+||........+..+......-..+.+ ++.+++.|+.++ .+.+||+.+ +.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~d~~~-~~ 135 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL----NGLLYAVGGFDGSTGLSSVEAYNIKS-NE 135 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE----TTEEEEEEEECSSCEEEEEEEEETTT-TE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE----CCEEEEEcCCCCCccCceEEEEeCCC-Ce
Confidence 56677777755 3467777654433333222211111122222 257777777653 466777754 44
Q ss_pred eEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC-------CcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCC
Q 036510 92 WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD-------GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPG 164 (288)
Q Consensus 92 ~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d-------~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~ 164 (288)
|.....++..+....++.+ + +.+++.|+.+ +.+..||+.++ .|...............+..
T Consensus 136 W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~~~~~~~------- 203 (302)
T 2xn4_A 136 WFHVAPMNTRRSSVGVGVV--G--GLLYAVGGYDVASRQCLSTVECYNATTN-EWTYIAEMSTRRSGAGVGVL------- 203 (302)
T ss_dssp EEEECCCSSCCBSCEEEEE--T--TEEEEECCEETTTTEECCCEEEEETTTT-EEEEECCCSSCCBSCEEEEE-------
T ss_pred EeecCCCCCcccCceEEEE--C--CEEEEEeCCCCCCCccccEEEEEeCCCC-cEEECCCCccccccccEEEE-------
Confidence 5443333322222222222 2 4556666542 34777887643 34322111000000011111
Q ss_pred ceecccccCCCceeEEeecC-----CcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCC----
Q 036510 165 ALVGSGFLDPVQKLCSGGCD-----NTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDG---- 235 (288)
Q Consensus 165 ~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~---- 235 (288)
++.+++.|+.+ +.+.+||..+..|.. +..+......-..+.+ + +.+++.|+.++
T Consensus 204 ---------~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~--~~~~~~~r~~~~~~~~--~----~~i~v~GG~~~~~~~ 266 (302)
T 2xn4_A 204 ---------NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ--VADMNMCRRNAGVCAV--N----GLLYVVGGDDGSCNL 266 (302)
T ss_dssp ---------TTEEEEECCBSSSSBCCCEEEEETTTTEEEE--ECCCSSCCBSCEEEEE--T----TEEEEECCBCSSSBC
T ss_pred ---------CCEEEEECCCCCCcccceEEEEeCCCCCEee--CCCCCCccccCeEEEE--C----CEEEEECCcCCCccc
Confidence 12556666654 357788887766542 1122111111122222 2 35677777653
Q ss_pred -cEEEEEeec
Q 036510 236 -KVIIWTVAR 244 (288)
Q Consensus 236 -~i~iw~~~~ 244 (288)
.+.+||+..
T Consensus 267 ~~v~~yd~~~ 276 (302)
T 2xn4_A 267 ASVEYYNPTT 276 (302)
T ss_dssp CCEEEEETTT
T ss_pred ccEEEEcCCC
Confidence 478888764
No 287
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.23 E-value=1.9 Score=35.27 Aligned_cols=189 Identities=14% Similarity=0.149 Sum_probs=89.3
Q ss_pred CCCEEEEeeCC----CcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCC------CcEEEeecCCCCc
Q 036510 22 YGKRLATASSD----YSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFD------GTVIIWKEGNSNE 91 (288)
Q Consensus 22 ~g~~l~s~~~d----~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d------~~v~iwd~~~~~~ 91 (288)
+++.++.|+.+ ..+.+||........+..+.........+.. ++.+++.|+.+ ..+.+||..+ +.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~d~~~-~~ 129 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA----EGKIYTSGGSEVGNSALYLFECYDTRT-ES 129 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE----TTEEEEECCBBTTBSCCCCEEEEETTT-TE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE----CCEEEEECCCCCCCcEeeeEEEEeCCC-Cc
Confidence 56677777755 5677777654433333332211111122222 26777888765 4678888765 34
Q ss_pred eEEeEEeecCCCceeEEEeccCCCCeEEEEEeC---------CCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCC
Q 036510 92 WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSS---------DGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTA 162 (288)
Q Consensus 92 ~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~---------d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~ 162 (288)
|.....++..+..-.++.+ + +.+++.|+. -+.+..||+.++ .|............-..+..
T Consensus 130 W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~~~~~~~----- 199 (306)
T 3ii7_A 130 WHTKPSMLTQRCSHGMVEA--N--GLIYVCGGSLGNNVSGRVLNSCEVYDPATE-TWTELCPMIEARKNHGLVFV----- 199 (306)
T ss_dssp EEEECCCSSCCBSCEEEEE--T--TEEEEECCEESCTTTCEECCCEEEEETTTT-EEEEECCCSSCCBSCEEEEE-----
T ss_pred eEeCCCCcCCcceeEEEEE--C--CEEEEECCCCCCCCcccccceEEEeCCCCC-eEEECCCccchhhcceEEEE-----
Confidence 5443333222222222222 2 455555643 344778887654 34322110000000011111
Q ss_pred CCceecccccCCCceeEEeecC-----CcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCC---
Q 036510 163 PGALVGSGFLDPVQKLCSGGCD-----NTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASED--- 234 (288)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D--- 234 (288)
++++++.|+.+ ..+.+||+.+..|.. +..+........++.+ + +.+++.|+.+
T Consensus 200 -----------~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~--~~~~p~~r~~~~~~~~--~----~~i~v~GG~~~~~ 260 (306)
T 3ii7_A 200 -----------KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKM--VSPMPWKGVTVKCAAV--G----SIVYVLAGFQGVG 260 (306)
T ss_dssp -----------TTEEEEECCEETTEEBCCEEEEETTTTEEEE--CCCCSCCBSCCEEEEE--T----TEEEEEECBCSSS
T ss_pred -----------CCEEEEEeCCCCCCCCceEEEeeCCCCcEEE--CCCCCCCccceeEEEE--C----CEEEEEeCcCCCe
Confidence 12456666553 357788887765542 1222111111223333 2 3577778754
Q ss_pred --CcEEEEEeec
Q 036510 235 --GKVIIWTVAR 244 (288)
Q Consensus 235 --~~i~iw~~~~ 244 (288)
..+.+||+..
T Consensus 261 ~~~~~~~yd~~~ 272 (306)
T 3ii7_A 261 RLGHILEYNTET 272 (306)
T ss_dssp BCCEEEEEETTT
T ss_pred eeeeEEEEcCCC
Confidence 4577787764
No 288
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.19 E-value=3.8 Score=38.59 Aligned_cols=240 Identities=13% Similarity=0.029 Sum_probs=124.6
Q ss_pred ccceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEE-------E-----eccccCeEEEEecCCCCCCEEEEeeCC
Q 036510 11 EDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAK-------L-----SGHKGAVWEVAWAHPKFGSILASCSFD 78 (288)
Q Consensus 11 ~~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~-------~-----~~h~~~v~~~~~~~~~~~~~l~s~s~d 78 (288)
...|.++...++|++.+ |...+-+.+++........... . .-....|.++...+ +|. |-.|+.+
T Consensus 257 ~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~--~g~-lWigt~~ 332 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWI-ATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS--FNN-IWIGTWG 332 (781)
T ss_dssp CCCEEEEEECTTSEEEE-EESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECS--SCC-EEEEEBS
T ss_pred CceEEEEEECCCCCEEE-EeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC--CCC-EEEEecC
Confidence 35688888888887655 4443456677764332111111 0 01235688888654 354 4456666
Q ss_pred CcEEEeecCCCCceEEeEE-------eecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEe-eccCCC
Q 036510 79 GTVIIWKEGNSNEWIKDHV-------FEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRI-DQAHPV 150 (288)
Q Consensus 79 ~~v~iwd~~~~~~~~~~~~-------~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~-~~~~~~ 150 (288)
+-|..++..... +..... -......|.++...++ +. +-.|+.++-|..|+..... +..... ......
T Consensus 333 ~Gl~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~v~~i~~d~~--g~-lWigt~~~Gl~~~~~~~~~-~~~~~~~~~~~~~ 407 (781)
T 3v9f_A 333 GGINFISNAPPT-FHTWSYSPTQMNESSLSNKVVSSVCDDGQ--GK-LWIGTDGGGINVFENGKRV-AIYNKENRELLSN 407 (781)
T ss_dssp SCEEEECSSCCS-CEEEC----CCCSSCCSSSCEEEEEECTT--SC-EEEEEBSSCEEEEETTEEE-EECC-----CCCS
T ss_pred CeEEEeCCCCCc-ceeeccCccccccCCCCCcceEEEEEcCC--CC-EEEEeCCCcEEEEECCCCe-EEEccCCCCCCCc
Confidence 778888765432 111110 0112346888876654 44 4456656668888764321 110000 011224
Q ss_pred CeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEE
Q 036510 151 GVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIAS 230 (288)
Q Consensus 151 ~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s 230 (288)
.|.++...+++ .|..|+.++-+..+|..++.. +...........|.++...+++ .|-.
T Consensus 408 ~v~~i~~d~~g---------------~lWigt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~v~~i~~d~~g-----~lwi 465 (781)
T 3v9f_A 408 SVLCSLKDSEG---------------NLWFGTYLGNISYYNTRLKKF--QIIELEKNELLDVRVFYEDKNK-----KIWI 465 (781)
T ss_dssp BEEEEEECTTS---------------CEEEEETTEEEEEECSSSCEE--EECCSTTTCCCCEEEEEECTTS-----EEEE
T ss_pred ceEEEEECCCC---------------CEEEEeccCCEEEEcCCCCcE--EEeccCCCCCCeEEEEEECCCC-----CEEE
Confidence 56666655543 355677666687787655422 1111101234568888776652 3545
Q ss_pred EeCCCcEEEEEeecCCCcccceEeec-----cccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 231 ASEDGKVIIWTVAREGDQWEGKVLHD-----FKTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 231 ~s~D~~i~iw~~~~~~~~~~~~~~~~-----~~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
|.. +.|..++.....- . ..... ....|.++...++|++.+....+| +..|+
T Consensus 466 gt~-~Gl~~~~~~~~~~--~-~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~ 521 (781)
T 3v9f_A 466 GTH-AGVFVIDLASKKV--I-HHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYT 521 (781)
T ss_dssp EET-TEEEEEESSSSSC--C-EEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEEC
T ss_pred EEC-CceEEEeCCCCeE--E-ecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEe
Confidence 555 5688888654311 1 11111 135788999989998766543344 44444
No 289
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.10 E-value=0.44 Score=44.61 Aligned_cols=199 Identities=11% Similarity=-0.007 Sum_probs=94.2
Q ss_pred eEEEEEcCCCCEEEEe-eCCCcEEEEEeCCCC--ceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCC
Q 036510 14 VHDVAMDYYGKRLATA-SSDYSIKIIGVGNNT--SQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN 90 (288)
Q Consensus 14 v~~~~~s~~g~~l~s~-~~d~~i~lwd~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~ 90 (288)
+.+++|++.+..|.-+ ...+.|+.++++... ......+.........|++... .+.++++-...+.|.+.++....
T Consensus 408 p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~-~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 408 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI-HSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp CCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS-SSBCEECCTTTSCEEEEBSSSCC
T ss_pred eEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee-CCcEEEEeccCCeEEEEecCCCc
Confidence 4466777755444433 345677777765310 0111111111112345666432 35667776677889888875332
Q ss_pred ceEEeEEeecCCCceeEEEeccCCCCeEEEEEeC-CCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecc
Q 036510 91 EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSS-DGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 169 (288)
Q Consensus 91 ~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~ 169 (288)
....+.........+++.|.+ +.++.+-.. .+.|..+++..... . .+....-.....|+|+|++.
T Consensus 487 ---~~~l~~~~~~~P~giavDp~~-g~ly~td~~~~~~I~~~~~dG~~~--~-~l~~~~l~~PnGlavd~~~~------- 552 (699)
T 1n7d_A 487 ---RKTLFREQGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLNGVDI--Y-SLVTENIQWPNGITLDLLSG------- 552 (699)
T ss_dssp ---EEEECCCSSCCCCCEECCSSS-SCCEECCCSSSCCEEBCCSSSCCC--C-EESCSSCSSCCCEEECTTTC-------
T ss_pred ---eEEEEeCCCCCcceEEEccCC-CcEEEcccCCCCeEEEEeCCCCCe--e-EEEeCCCCCccEEEEeccCC-------
Confidence 111222222345778888864 343333322 25666655432111 1 11111111234567776642
Q ss_pred cccCCCceeEEeecCCcEEEEEEeCCceeeeeeec--cccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEe
Q 036510 170 GFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPA--LQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV 242 (288)
Q Consensus 170 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~ 242 (288)
.++++-+..+.|..+|+.... ....+.. ...|. ..+.+..+ .++++....+.|..++.
T Consensus 553 ------~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~~~P---~glavd~~-----~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 553 ------RLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHP---FSLAVFED-----KVFWTDIINEAIFSANR 612 (699)
T ss_dssp ------CEEEEETTTTEEEEECSSSSC-CEEECCCSSSCSSC---CCCEEETT-----EEEEECSTTTCEEEEET
T ss_pred ------EEEEEecCCCeEEEEccCCCc-eEEEEecCCcCCCc---eEeEEECC-----EEEEEeCCCCeEEEEEc
Confidence 445555566778888875421 1111111 01122 23333332 45666666778888875
No 290
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.08 E-value=3.4 Score=37.57 Aligned_cols=49 Identities=14% Similarity=0.115 Sum_probs=27.7
Q ss_pred cEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEE
Q 036510 226 STIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVA 276 (288)
Q Consensus 226 ~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~ 276 (288)
.++..++.|+.|+.+|.+..+..++...-..... ..+.|.++|++++..
T Consensus 476 g~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~--~p~~~~~~G~~yv~~ 524 (571)
T 2ad6_A 476 GLVWYATLDGYLKALDNKDGKELWNFKMPSGGIG--SPMTYSFKGKQYIGS 524 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS--CCEEEEETTEEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEe--eeEEEEECCEEEEEE
Confidence 4677789999999999875433222111111111 223467888765543
No 291
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=94.07 E-value=1.6 Score=36.68 Aligned_cols=117 Identities=11% Similarity=0.140 Sum_probs=70.5
Q ss_pred ceEEEEE---cCCCCEEEEee-------------CCCcEEEEEeC---CCCceeeEEEeccc-----------cCeEEEE
Q 036510 13 TVHDVAM---DYYGKRLATAS-------------SDYSIKIIGVG---NNTSQHLAKLSGHK-----------GAVWEVA 62 (288)
Q Consensus 13 ~v~~~~~---s~~g~~l~s~~-------------~d~~i~lwd~~---~~~~~~~~~~~~h~-----------~~v~~~~ 62 (288)
.+.+|.+ .++|+++++.. .+..+..+|+. .+.......|.+.. .....++
T Consensus 64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva 143 (334)
T 2p9w_A 64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA 143 (334)
T ss_dssp EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE
T ss_pred eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE
Confidence 4578899 68887777543 25778888986 22222223333222 2377888
Q ss_pred ecCCCCCCEEEEeeCC-CcEEEeecCCCCceEEeEEee----cCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecC
Q 036510 63 WAHPKFGSILASCSFD-GTVIIWKEGNSNEWIKDHVFE----DHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARA 135 (288)
Q Consensus 63 ~~~~~~~~~l~s~s~d-~~v~iwd~~~~~~~~~~~~~~----~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~ 135 (288)
..+ +|+..++++.. +.|...+.. +... ....+. ...-..+.+.++|+ +.+|+.....+.|.-+|++.
T Consensus 144 vD~--~GnaYVt~s~~~~~I~rV~pd-G~~~-~~~~~~~~~~~~~~G~nGIv~~pd--g~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 144 QDR--DGNSYVAFALGMPAIARVSAD-GKTV-STFAWESGNGGQRPGYSGITFDPH--SNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp ECT--TSCEEEEEEESSCEEEEECTT-SCCE-EEEEECCCCSSSCCSCSEEEEETT--TTEEEEESSSSSEEEEECSS
T ss_pred ECC--CCCEEEeCCCCCCeEEEEeCC-CCEE-eeeeecCCCcccccCcceEEEeCC--CCEEEEEcCCCeEEEEcCCC
Confidence 764 48999988887 776655543 2211 111111 11223679999998 44555554499999999874
No 292
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.79 E-value=0.42 Score=44.77 Aligned_cols=199 Identities=9% Similarity=-0.057 Sum_probs=93.2
Q ss_pred CeEEEEecCCCCCCEEEEeeCCCcEEEeecCCC---CceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEee
Q 036510 57 AVWEVAWAHPKFGSILASCSFDGTVIIWKEGNS---NEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTA 133 (288)
Q Consensus 57 ~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~---~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~ 133 (288)
.+.+++|.+. .+.++++-...+.|..+++... .. ....+.........|++.+.. +.++++-...+.|.++++
T Consensus 407 ~p~gla~d~~-~~~Ly~sD~~~~~I~~~~~~g~~~~~~--~~~~i~~~~~~P~glavD~~~-g~LY~tD~~~~~I~v~d~ 482 (699)
T 1n7d_A 407 NVVALDTEVA-SNRIYWSDLSQRMICSTQLDRAHGVSS--YDTVISRDIQAPDGLAVDWIH-SNIYWTDSVLGTVSVADT 482 (699)
T ss_dssp TCCCCEEETT-TTEEEECCTTTTSBEEEESCCCCC-CC--CCCBCCSCC--CCCEECCCSS-SBCEECCTTTSCEEEEBS
T ss_pred ceEEEccccc-cCeEEEEecCCCeEEEEecCCCCCCcc--eEEEEeCCCCCcceEEEEeeC-CcEEEEeccCCeEEEEec
Confidence 4567788643 3455566566788888887531 11 111111111234567776543 444454455677888776
Q ss_pred cCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecC-CcEEEEEEeCCceeeeeeeccccCCcce
Q 036510 134 RADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD-NTVKVWKLYNGIWKMDCFPALQMHTDWV 212 (288)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d-~~i~iwd~~~~~~~~~~~~~~~~h~~~V 212 (288)
... ... .+..........|+++|... .++++-... +.|...++..... +.+. ...-..-
T Consensus 483 dg~--~~~-~l~~~~~~~P~giavDp~~g-------------~ly~td~~~~~~I~~~~~dG~~~--~~l~--~~~l~~P 542 (699)
T 1n7d_A 483 KGV--KRK-TLFREQGSKPRAIVVDPVHG-------------FMYWTDWGTPAKIKKGGLNGVDI--YSLV--TENIQWP 542 (699)
T ss_dssp SSC--CEE-EECCCSSCCCCCEECCSSSS-------------CCEECCCSSSCCEEBCCSSSCCC--CEES--CSSCSSC
T ss_pred CCC--ceE-EEEeCCCCCcceEEEccCCC-------------cEEEcccCCCCeEEEEeCCCCCe--eEEE--eCCCCCc
Confidence 432 111 11111112234556666541 223332222 5566655533211 1110 1111234
Q ss_pred EEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeec--cccCeEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 213 RDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHD--FKTPVYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 213 ~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~--~~~~i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
+.|+|+|+. +.+.++=+..+.|..+++.... ....+.. .-.....+++..+ .++++....+.|..++
T Consensus 543 nGlavd~~~---~~LY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d 611 (699)
T 1n7d_A 543 NGITLDLLS---GRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSAN 611 (699)
T ss_dssp CCEEECTTT---CCEEEEETTTTEEEEECSSSSC---CEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEE
T ss_pred cEEEEeccC---CEEEEEecCCCeEEEEccCCCc---eEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEE
Confidence 678999864 3456666677788888875321 1112111 1122344555333 3333334456777665
No 293
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.77 E-value=2.7 Score=35.50 Aligned_cols=76 Identities=18% Similarity=0.209 Sum_probs=41.6
Q ss_pred ceEEEEecCCCC---CCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 211 WVRDVAWAPNLG---LPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 211 ~V~~v~~sp~~~---~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
....+.|.+... +.++++++--..+.|...++.......+...+......+..+++.|||.++++.+ +..=+||++
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td-~~~g~I~ri 350 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTD-ESSGELLKV 350 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEEC-STTEEEEEE
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEe-CCCCEEEEE
Confidence 356667754211 1246777766777787777763210001112222234789999999999766543 222345553
No 294
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.74 E-value=2.4 Score=34.76 Aligned_cols=227 Identities=15% Similarity=0.175 Sum_probs=103.0
Q ss_pred CCCCEEEEeeCC----CcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeC----C-----CcEEEeecC
Q 036510 21 YYGKRLATASSD----YSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSF----D-----GTVIIWKEG 87 (288)
Q Consensus 21 ~~g~~l~s~~~d----~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~----d-----~~v~iwd~~ 87 (288)
-++..++-|+.+ ..+.+||........+..+......-..+.. ++.+++.|+. + ..+.++|+.
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~~~~~~d~~ 98 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV----GGLLYAVGGRNNSPDGNTDSSALDCYNPM 98 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE----TTEEEEECCEEEETTEEEECCCEEEEETT
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE----CCEEEEECCCcCCCCCCeecceEEEECCC
Confidence 356777777742 4577787654333322222111111111222 2567777765 2 457778876
Q ss_pred CCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC-----CcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCC
Q 036510 88 NSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD-----GNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTA 162 (288)
Q Consensus 88 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~ 162 (288)
+ +.|.....++..+..-..+.+ + +.+++.|+.+ +.+..||+.++ .|............-..+.+
T Consensus 99 ~-~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~~~~~~~----- 167 (308)
T 1zgk_A 99 T-NQWSPCAPMSVPRNRIGVGVI--D--GHIYAVGGSHGCIHHNSVERYEPERD-EWHLVAPMLTRRIGVGVAVL----- 167 (308)
T ss_dssp T-TEEEECCCCSSCCBTCEEEEE--T--TEEEEECCEETTEECCCEEEEETTTT-EEEECCCCSSCCBSCEEEEE-----
T ss_pred C-CeEeECCCCCcCccccEEEEE--C--CEEEEEcCCCCCcccccEEEECCCCC-eEeECCCCCccccceEEEEE-----
Confidence 5 345443333222222222222 2 4566666543 35777777643 23221110000000011111
Q ss_pred CCceecccccCCCceeEEeecC-----CcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCC---
Q 036510 163 PGALVGSGFLDPVQKLCSGGCD-----NTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASED--- 234 (288)
Q Consensus 163 ~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D--- 234 (288)
+..+++.|+.+ +.+.+||..+..|.. +..+......-..+.+ + +.+++.|+.+
T Consensus 168 -----------~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~--~~~~p~~r~~~~~~~~--~----~~iyv~GG~~~~~ 228 (308)
T 1zgk_A 168 -----------NRLLYAVGGFDGTNRLNSAECYYPERNEWRM--ITAMNTIRSGAGVCVL--H----NCIYAAGGYDGQD 228 (308)
T ss_dssp -----------TTEEEEECCBCSSCBCCCEEEEETTTTEEEE--CCCCSSCCBSCEEEEE--T----TEEEEECCBCSSS
T ss_pred -----------CCEEEEEeCCCCCCcCceEEEEeCCCCeEee--CCCCCCccccceEEEE--C----CEEEEEeCCCCCC
Confidence 12455666554 457788887765542 1121111111122333 2 3567777765
Q ss_pred --CcEEEEEeecCCCcccceEeeccc---cCeEEEEeecCCCEEEEEeCC-----CcEEEeEc
Q 036510 235 --GKVIIWTVAREGDQWEGKVLHDFK---TPVYRVSWSLTGNILAVADGN-----NNVTLWEE 287 (288)
Q Consensus 235 --~~i~iw~~~~~~~~~~~~~~~~~~---~~i~~~~~spdg~~l~s~~~d-----~~v~~w~~ 287 (288)
..+.+||+... .+.. +.... ..-..+. -++++++.|+.+ ..|.+||.
T Consensus 229 ~~~~v~~yd~~~~--~W~~--~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 229 QLNSVERYDVETE--TWTF--VAPMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDP 285 (308)
T ss_dssp BCCCEEEEETTTT--EEEE--CCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEET
T ss_pred ccceEEEEeCCCC--cEEE--CCCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcC
Confidence 45888887643 2221 11111 1111222 377888888754 35677764
No 295
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.50 E-value=2.6 Score=34.31 Aligned_cols=106 Identities=11% Similarity=0.166 Sum_probs=54.7
Q ss_pred CCCEEEEeeCC-----CcEEEEEeCCCC---ceeeEEEeccccCeEEEEecCCCCCCEEEEeeCC-----CcEEEeecCC
Q 036510 22 YGKRLATASSD-----YSIKIIGVGNNT---SQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFD-----GTVIIWKEGN 88 (288)
Q Consensus 22 ~g~~l~s~~~d-----~~i~lwd~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d-----~~v~iwd~~~ 88 (288)
++++++.|+.+ ..+.+||..... .+.+..+.........+.. ++.+++.|+.+ ..+.++|+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~~d~~~ 137 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL----GDMIYVSGGFDGSRRHTSMERYDPNI 137 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE----TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE----CCEEEEEcccCCCcccceEEEEcCCC
Confidence 46677777765 457788875544 4333332211111122222 26677777654 3577888764
Q ss_pred CCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC-----CcEEEEeecCC
Q 036510 89 SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD-----GNISVFTARAD 136 (288)
Q Consensus 89 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d-----~~i~i~d~~~~ 136 (288)
+.|.....++..+..-.++.+ + +.+++.|+.+ +.+..||+.++
T Consensus 138 -~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 138 -DQWSMLGDMQTAREGAGLVVA--S--GVIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp -TEEEEEEECSSCCBSCEEEEE--T--TEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred -CeEEECCCCCCCcccceEEEE--C--CEEEEECCCCCCcccceEEEEeCCCC
Confidence 445544333322222222222 2 4566666654 45777887653
No 296
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=93.46 E-value=3.1 Score=35.12 Aligned_cols=98 Identities=13% Similarity=0.046 Sum_probs=53.3
Q ss_pred eEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEe---ccccCeEEEEecCC--CCCCEEEEeeCC-----CcEEE
Q 036510 14 VHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS---GHKGAVWEVAWAHP--KFGSILASCSFD-----GTVII 83 (288)
Q Consensus 14 v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~---~h~~~v~~~~~~~~--~~~~~l~s~s~d-----~~v~i 83 (288)
-.+++|.|+|+++++ ..++.|++++ + ...+.+..+. .-......++++++ ..+.++++-+.. +.|..
T Consensus 33 P~~ia~~pdG~l~V~-e~~g~I~~i~-~-g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 33 PWALAFLPDGGMLIA-ERPGRIRLFR-E-GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp EEEEEECTTSCEEEE-ETTTEEEEEE-T-TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCeEEEE-eCCCeEEEEE-C-CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 357899999986665 5668888887 3 2222232221 12345788999753 024555555533 56777
Q ss_pred eecCCCCc--e-EEeEEee---cCCCceeEEEeccCC
Q 036510 84 WKEGNSNE--W-IKDHVFE---DHKSSVNSIDWAPHE 114 (288)
Q Consensus 84 wd~~~~~~--~-~~~~~~~---~h~~~v~~l~~~p~~ 114 (288)
++...... . .....++ ........+.|.|++
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG 146 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG 146 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC
Confidence 77653210 0 1111132 111134688898874
No 297
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=93.07 E-value=3.3 Score=34.29 Aligned_cols=220 Identities=8% Similarity=-0.037 Sum_probs=114.2
Q ss_pred CcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCC---CceEEeEEeecCCCceeEEE
Q 036510 33 YSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNS---NEWIKDHVFEDHKSSVNSID 109 (288)
Q Consensus 33 ~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~---~~~~~~~~~~~h~~~v~~l~ 109 (288)
..|+..+++.... ...+. ......++.|.+. .+.++.+-..++.|..+++... .. ....+.........++
T Consensus 10 ~~I~~i~~~~~~~--~~~~~-~~~~p~g~~~d~~-~~~ly~~D~~~~~I~~~~~~g~~~~~~--~~~~~~~~~~~p~gla 83 (316)
T 1ijq_A 10 HEVRKMTLDRSEY--TSLIP-NLRNVVALDTEVA-SNRIYWSDLSQRMICSTQLDRAHGVSS--YDTVISRDIQAPDGLA 83 (316)
T ss_dssp SSEEEEETTSCCC--EEEEC-SCSSEEEEEEETT-TTEEEEEETTTTEEEEEEC----------CEEEECSSCSCCCEEE
T ss_pred CeEEEEECCCcce--Eehhc-CCCceEEEEEEeC-CCEEEEEECCCCcEEEEECCCCCCCcc--cEEEEeCCCCCcCEEE
Confidence 4577777754322 22222 3445678999753 3567777777899999887541 11 1112222223457888
Q ss_pred eccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecC-CcEE
Q 036510 110 WAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD-NTVK 188 (288)
Q Consensus 110 ~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d-~~i~ 188 (288)
+.+.+ +.++.+-...+.|.++++... . .. ......-.....++.+|.+. .++++.... +.|.
T Consensus 84 vd~~~-~~ly~~d~~~~~I~~~~~~g~-~-~~-~~~~~~~~~P~~iavdp~~g-------------~ly~~d~~~~~~I~ 146 (316)
T 1ijq_A 84 VDWIH-SNIYWTDSVLGTVSVADTKGV-K-RK-TLFRENGSKPRAIVVDPVHG-------------FMYWTDWGTPAKIK 146 (316)
T ss_dssp EETTT-TEEEEEETTTTEEEEEETTSS-S-EE-EEEECTTCCEEEEEEETTTT-------------EEEEEECSSSCEEE
T ss_pred EeecC-CeEEEEECCCCEEEEEeCCCC-c-eE-EEEECCCCCcceEEeCCCCC-------------EEEEEccCCCCeEE
Confidence 87643 455555566778888876532 1 11 11121223456777777541 334444332 5666
Q ss_pred EEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeec--cccCeEEEEe
Q 036510 189 VWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHD--FKTPVYRVSW 266 (288)
Q Consensus 189 iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~--~~~~i~~~~~ 266 (288)
..++.... . +.+. ...-..-+.++++|+. +.+.++-+..+.|..+++.... . ...... .-.....+++
T Consensus 147 ~~~~dG~~-~-~~~~--~~~~~~P~gla~d~~~---~~lY~~D~~~~~I~~~d~dg~~-~--~~~~~~~~~~~~P~giav 216 (316)
T 1ijq_A 147 KGGLNGVD-I-YSLV--TENIQWPNGITLDLLS---GRLYWVDSKLHSISSIDVNGGN-R--KTILEDEKRLAHPFSLAV 216 (316)
T ss_dssp EEETTSCC-E-EEEE--CSSCSCEEEEEEETTT---TEEEEEETTTTEEEEEETTSCS-C--EEEEECTTTTSSEEEEEE
T ss_pred EEcCCCCC-e-EEEE--ECCCCCceEEEEeccC---CEEEEEECCCCeEEEEecCCCc-e--EEEeecCCccCCcEEEEE
Confidence 66654321 1 1111 1122345789999864 3455666667788888875321 1 112111 1134567777
Q ss_pred ecCCCEEEEEeCCCcEEEeE
Q 036510 267 SLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 267 spdg~~l~s~~~d~~v~~w~ 286 (288)
. .+..+++-...+.|..++
T Consensus 217 ~-~~~ly~~d~~~~~V~~~~ 235 (316)
T 1ijq_A 217 F-EDKVFWTDIINEAIFSAN 235 (316)
T ss_dssp E-TTEEEEEETTTTEEEEEE
T ss_pred E-CCEEEEEECCCCeEEEEe
Confidence 4 344444444556676665
No 298
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.91 E-value=5.5 Score=36.45 Aligned_cols=60 Identities=8% Similarity=0.072 Sum_probs=32.6
Q ss_pred EEEeeCCCcEEEEEeCCCCceeeEEEe--cccc--CeEE-EEecCCCCCCEEEEee-----CCCcEEEeecCCCC
Q 036510 26 LATASSDYSIKIIGVGNNTSQHLAKLS--GHKG--AVWE-VAWAHPKFGSILASCS-----FDGTVIIWKEGNSN 90 (288)
Q Consensus 26 l~s~~~d~~i~lwd~~~~~~~~~~~~~--~h~~--~v~~-~~~~~~~~~~~l~s~s-----~d~~v~iwd~~~~~ 90 (288)
|+.++.|+.+..+|... ++.+-... .+.. .+.+ .... ++.+++.++ .++.|..+|..+++
T Consensus 124 V~v~t~dg~l~AlDa~T--G~~~W~~~~~~~~~~~~~~ssP~v~---~g~V~vg~~g~e~g~~g~v~A~D~~TG~ 193 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAET--GETVWKVENSDIKVGSTLTIAPYVV---KDKVIIGSSGAELGVRGYLTAYDVKTGE 193 (599)
T ss_dssp EEEECTTSEEEEEETTT--CCEEEEEECCCGGGTCBCCSCCEEE---TTEEEECCBCGGGTCCCEEEEEETTTCC
T ss_pred EEEEcCCCEEEEEECCC--CCEEEeecCCCCCccceeecCCEEE---CCEEEEEecccccCCCCeEEEEECCCCc
Confidence 77788888887777643 34443332 2211 1111 0111 244444333 48999999998876
No 299
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=92.59 E-value=4.3 Score=34.42 Aligned_cols=203 Identities=16% Similarity=0.264 Sum_probs=107.1
Q ss_pred EEecCCC--CCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCC--CC----eEEEEEeC--CCcEEE
Q 036510 61 VAWAHPK--FGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHE--LG----LCLACGSS--DGNISV 130 (288)
Q Consensus 61 ~~~~~~~--~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~--~~----~~l~sg~~--d~~i~i 130 (288)
..|.++. ...+++.....+-+.++|+ +++ ....++. +.++.+++-|.- .+ ..+++... +++|++
T Consensus 30 avw~~~~dp~~s~ii~t~k~~gL~Vydl-~G~---~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~v 103 (355)
T 3amr_A 30 AIWLDPKTPQNSKLITTNKKSGLVVYSL-DGK---MLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEI 103 (355)
T ss_dssp EEECCSSCGGGCEEEEEETTTEEEEEET-TSC---EEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEE
T ss_pred cEecCCCCCCccEEEEEcCCCCEEEEcC-CCc---EEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEE
Confidence 4465432 2345666677789999999 555 2333432 567888776631 01 23444444 689999
Q ss_pred EeecC-CCCeeeEEee--c-cCC-CCeeEEEe--CCCCCCCceecccccCCCceeEEeecCCcEEEEEEeC---Cceeee
Q 036510 131 FTARA-DGGWDTSRID--Q-AHP-VGVTSVSW--APSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYN---GIWKMD 200 (288)
Q Consensus 131 ~d~~~-~~~~~~~~~~--~-~~~-~~v~~i~~--~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~~ 200 (288)
|++.. ...+...... . ... ..+.-++. +|... ..++.....++.+..|++.. +....+
T Consensus 104 f~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g------------~~yafV~~k~G~~~q~~l~~~~~g~~~~~ 171 (355)
T 3amr_A 104 YAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTG------------KYYAMVTGKEGEFEQYELKADKNGYISGK 171 (355)
T ss_dssp EEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTC------------CEEEEEECSSSEEEEEEEEECTTSCEEEE
T ss_pred EEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCC------------cEEEEEECCCCeEEEEEEEeCCCCcccce
Confidence 98842 2222111000 0 000 11222222 34321 12455667789999999853 222334
Q ss_pred eeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeec-----cccCeEEEEe--ecCCC-E
Q 036510 201 CFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHD-----FKTPVYRVSW--SLTGN-I 272 (288)
Q Consensus 201 ~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~-----~~~~i~~~~~--spdg~-~ 272 (288)
.+..+... +.+..+...+.. .+|-.+-.|..|..++.+.... .....+.. +...+-.++. .++|+ +
T Consensus 172 lVR~f~lg-sq~EgcvvDd~~----g~Lyv~eEd~GIw~~da~p~~~-~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gy 245 (355)
T 3amr_A 172 KVRAFKMN-SQTEGMAADDEY----GRLYIAEEDEAIWKFSAEPDGG-SNGTVIDRADGRHLTRDIEGLTIYYAADGKGY 245 (355)
T ss_dssp EEEEEECS-SCEEEEEEETTT----TEEEEEETTTEEEEEECSTTSC-SCCEEEEEBSSSSBCSCEEEEEEEECGGGCEE
T ss_pred EEEEecCC-CCcceEEEcCCC----CeEEEecccceEEEEeCCcCCC-CCceEEEEecCCccccCcceEEEEecCCCCEE
Confidence 55555433 346777777753 4677788886644444322110 11122221 1235667776 56666 5
Q ss_pred EEEEe-CCCcEEEeEc
Q 036510 273 LAVAD-GNNNVTLWEE 287 (288)
Q Consensus 273 l~s~~-~d~~v~~w~~ 287 (288)
|++++ .+++..|||.
T Consensus 246 LivSsQG~~s~~Vydr 261 (355)
T 3amr_A 246 LMASSQGNSSYAIYDR 261 (355)
T ss_dssp EEEEEGGGTEEEEEES
T ss_pred EEEEcCCCCEEEEEEC
Confidence 55555 7889999985
No 300
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.56 E-value=3.7 Score=33.60 Aligned_cols=106 Identities=16% Similarity=0.112 Sum_probs=51.9
Q ss_pred CCCEEEEeeC----C-----CcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCC-----CcEEEeecC
Q 036510 22 YGKRLATASS----D-----YSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFD-----GTVIIWKEG 87 (288)
Q Consensus 22 ~g~~l~s~~~----d-----~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d-----~~v~iwd~~ 87 (288)
++++++.|+. + ..+.+||......+.+..+.........+.. ++.+++.|+.+ ..+.++|+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~ 145 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI----DGHIYAVGGSHGCIHHNSVERYEPE 145 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE----TTEEEEECCEETTEECCCEEEEETT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE----CCEEEEEcCCCCCcccccEEEECCC
Confidence 5667777765 2 3567777654333333222211111122222 25677777643 357778876
Q ss_pred CCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC-----CcEEEEeecCC
Q 036510 88 NSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD-----GNISVFTARAD 136 (288)
Q Consensus 88 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d-----~~i~i~d~~~~ 136 (288)
+ +.|.....++..+..-.++.+ + +.+++.|+.+ +.+..||+.++
T Consensus 146 ~-~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 146 R-DEWHLVAPMLTRRIGVGVAVL--N--RLLYAVGGFDGTNRLNSAECYYPERN 194 (308)
T ss_dssp T-TEEEECCCCSSCCBSCEEEEE--T--TEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred C-CeEeECCCCCccccceEEEEE--C--CEEEEEeCCCCCCcCceEEEEeCCCC
Confidence 4 345443333322222222222 2 4566666654 45777887643
No 301
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=92.44 E-value=5.1 Score=34.88 Aligned_cols=160 Identities=8% Similarity=0.027 Sum_probs=81.0
Q ss_pred eEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCc---EEEEeec
Q 036510 58 VWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGN---ISVFTAR 134 (288)
Q Consensus 58 v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~---i~i~d~~ 134 (288)
...+++++...+.++++ ...+.|+.+|+.... ...+.........++|++++ ..++++....+. ..+|..+
T Consensus 139 P~~lavdp~~~g~Lyv~-d~~~~I~~id~~~~~----v~~~~~~~~~P~~ia~d~~G-~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLV-GEQHPTRLIDFEKEY----VSTVYSGLSKVRTICWTHEA-DSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCEEEEETTEEEEEEEE-EBTEEEEEEETTTTE----EEEEECCCSCEEEEEECTTS-SEEEEEECCSCTTSEEEEEEEG
T ss_pred CCEEEECCCCCCeEEEE-eCCCcEEEEECCCCE----EEEEecCCCCcceEEEeCCC-CEEEEEeCCCCcccceEEEEeC
Confidence 35677764112344443 333788888875432 12232234457889999874 224444432221 1222222
Q ss_pred CCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEE
Q 036510 135 ADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRD 214 (288)
Q Consensus 135 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~ 214 (288)
.+ .+........ ......+.++|+. +.++++-..++.|..+|...+.. ..+..+.. ...-+.
T Consensus 213 ~g-~~~~~~~l~~-~~~p~giavdp~~-------------g~lyv~d~~~~~V~~~~~~~~~~--~~~~~~~~-~~~P~g 274 (430)
T 3tc9_A 213 ES-GFKVITELTK-GQNCNGAETHPIN-------------GELYFNSWNAGQVFRYDFTTQET--TPLFTIQD-SGWEFH 274 (430)
T ss_dssp GG-TSCSEEEEEE-CSSCCCEEECTTT-------------CCEEEEETTTTEEEEEETTTTEE--EEEEECSS-SSCCEE
T ss_pred CC-ceeeeeeecc-CCCceEEEEeCCC-------------CEEEEEECCCCEEEEEECCCCcE--EEEEEcCC-CCccee
Confidence 22 1211111111 1123455666632 24555655677888888765421 11111111 123478
Q ss_pred EEecCCCCCCCcEEEEEeCCCcEEEEEeec
Q 036510 215 VAWAPNLGLPKSTIASASEDGKVIIWTVAR 244 (288)
Q Consensus 215 v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~ 244 (288)
++|+|++ ..+.++-...+.|..++...
T Consensus 275 ia~~pdG---~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 275 IQFHPSG---NYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEECTTS---SEEEEEETTTTEEEEEEEET
T ss_pred EEEcCCC---CEEEEEECCCCEEEEEeCCc
Confidence 9999985 22566666788899988763
No 302
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=92.29 E-value=4.7 Score=34.18 Aligned_cols=200 Identities=12% Similarity=0.095 Sum_probs=106.2
Q ss_pred CCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCC--CCC---E-EEEeeC--CCcEEEeecCCC-Cce
Q 036510 22 YGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPK--FGS---I-LASCSF--DGTVIIWKEGNS-NEW 92 (288)
Q Consensus 22 ~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~---~-l~s~s~--d~~v~iwd~~~~-~~~ 92 (288)
..++++...+.+-+.+||+++ +.++.+.. +.++.+...+.. .++ + +++.-. ++++++|++... .++
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G---~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l 113 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDG---KMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL 113 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTS---CEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCE
T ss_pred CccEEEEEcCCCCEEEEcCCC---cEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCce
Confidence 346677788888999999953 55666653 456665543210 122 1 333334 689999976321 221
Q ss_pred EEeEE----eecCCCceeEEEe--ccCCCCeEEEEEeCCCcEEEEeecCC--CCeeeEEee-ccCCCCeeEEEeCCCCCC
Q 036510 93 IKDHV----FEDHKSSVNSIDW--APHELGLCLACGSSDGNISVFTARAD--GGWDTSRID-QAHPVGVTSVSWAPSTAP 163 (288)
Q Consensus 93 ~~~~~----~~~h~~~v~~l~~--~p~~~~~~l~sg~~d~~i~i~d~~~~--~~~~~~~~~-~~~~~~v~~i~~~p~~~~ 163 (288)
..... +......++.+++ +|.....++.....++.+..|.+... +......+. -....++..+...+..
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~-- 191 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEY-- 191 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTT--
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCC--
Confidence 11100 0011145677777 66432345667778899999988532 112111111 1123456666666554
Q ss_pred CceecccccCCCceeEEeecCCcEEEEEEe--CCc-eeeeeeecc-ccCC-cceEEEEecCCCCCCCcEEEEEe-CCCcE
Q 036510 164 GALVGSGFLDPVQKLCSGGCDNTVKVWKLY--NGI-WKMDCFPAL-QMHT-DWVRDVAWAPNLGLPKSTIASAS-EDGKV 237 (288)
Q Consensus 164 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~-~~~~~~~~~-~~h~-~~V~~v~~sp~~~~~~~~l~s~s-~D~~i 237 (288)
..|..+-++.- ||.+. ... ...+.+..+ .++- ..+..+.+-+.... ..+|++.+ .+++.
T Consensus 192 ------------g~Lyv~eEd~G--Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g-~gyLivSsQG~~s~ 256 (355)
T 3amr_A 192 ------------GRLYIAEEDEA--IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADG-KGYLMASSQGNSSY 256 (355)
T ss_dssp ------------TEEEEEETTTE--EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGG-CEEEEEEEGGGTEE
T ss_pred ------------CeEEEecccce--EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCC-CEEEEEEcCCCCEE
Confidence 57888888754 56654 211 011233222 1222 24777777432110 12555555 57899
Q ss_pred EEEEee
Q 036510 238 IIWTVA 243 (288)
Q Consensus 238 ~iw~~~ 243 (288)
.+||.+
T Consensus 257 ~Vydr~ 262 (355)
T 3amr_A 257 AIYDRQ 262 (355)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 999986
No 303
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=91.91 E-value=7.2 Score=35.48 Aligned_cols=50 Identities=16% Similarity=0.300 Sum_probs=28.3
Q ss_pred CCcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeCCCcEEEeEc
Q 036510 234 DGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEE 287 (288)
Q Consensus 234 D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~d~~v~~w~~ 287 (288)
++.|.-||+...+..++... ..++..-.....|..+..|+.|+.++.||.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~----~~~~~~g~~~tagglvf~g~~dg~l~A~D~ 514 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE----HLPLWAGVLATAGNLVFTGTGDGYFKAFDA 514 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE----SSCCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred cceEEEEECCCCCEEEEecC----CCCCcccceEeCCCEEEEECCCCcEEEEEC
Confidence 56788888765433333221 112221122234666777889999999884
No 304
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=91.75 E-value=5.4 Score=33.70 Aligned_cols=99 Identities=13% Similarity=0.059 Sum_probs=52.9
Q ss_pred ceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEe---ccccCeEEEEecCC--CCCCEEEEeeC---C----Cc
Q 036510 13 TVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS---GHKGAVWEVAWAHP--KFGSILASCSF---D----GT 80 (288)
Q Consensus 13 ~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~---~h~~~v~~~~~~~~--~~~~~l~s~s~---d----~~ 80 (288)
.-.+++|.|+|++++ +..++.|++++.+ +. +.+..+. .-......|++.++ .++.++++-+. + ..
T Consensus 30 ~P~~ia~~pdG~l~V-~e~~g~I~~~d~~-G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLV-TERPGRLVLISPS-GK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp CEEEEEEEETTEEEE-EETTTEEEEECSS-CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCeEEEEcCCCeEEE-EeCCCEEEEEeCC-Cc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 346788999997555 4566888887632 22 2333221 12345788999753 13556665543 3 56
Q ss_pred EEEeecCCCC-ceE----EeEEeec-CCCceeEEEeccCC
Q 036510 81 VIIWKEGNSN-EWI----KDHVFED-HKSSVNSIDWAPHE 114 (288)
Q Consensus 81 v~iwd~~~~~-~~~----~~~~~~~-h~~~v~~l~~~p~~ 114 (288)
|..++..... ... ....++. .......+.|.|++
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG 146 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDG 146 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCC
Confidence 6666654321 110 1111221 11134678899984
No 305
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=91.60 E-value=5.2 Score=33.22 Aligned_cols=180 Identities=11% Similarity=-0.009 Sum_probs=92.8
Q ss_pred CCcEEEeecCCCC-ceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEE
Q 036510 78 DGTVIIWKEGNSN-EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVS 156 (288)
Q Consensus 78 d~~v~iwd~~~~~-~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 156 (288)
...|+..++.... .... .+. ....+..++|++.+ +.++.+-...+.|..+++........ ....+ -.....++
T Consensus 12 ~~~I~~i~l~~~~~~~~~--~~~-~~~~~~~ld~d~~~-~~lyw~D~~~~~I~r~~~~g~~~~~~-~~~~~-l~~p~gla 85 (318)
T 3sov_A 12 RRDLRLVDATNGKENATI--VVG-GLEDAAAVDFVFSH-GLIYWSDVSEEAIKRTEFNKTESVQN-VVVSG-LLSPDGLA 85 (318)
T ss_dssp EEEEEEEETTCTTSCCEE--EEE-EEEEEEEEEEEGGG-TEEEEEETTTTEEEEEETTSSSCCCE-EEEEC-CSCCCEEE
T ss_pred cCeEEEEECCCCceEEEE--Eec-CCCccEEEEEEeCC-CEEEEEECCCCcEEEEEccCCCceEE-EEcCC-CCCccEEE
Confidence 4678888876542 1111 111 12346788998864 55555556667787777653321111 11111 11233444
Q ss_pred eCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEe-CCC
Q 036510 157 WAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASAS-EDG 235 (288)
Q Consensus 157 ~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s-~D~ 235 (288)
+.+.. +.+.++-...+.|.++++..... +.+ +......-+.+++.|.. +.++.+-. ..+
T Consensus 86 vd~~~-------------g~ly~~d~~~~~I~~~~~dG~~~--~~l--~~~~~~~P~giavdp~~---g~ly~td~~~~~ 145 (318)
T 3sov_A 86 CDWLG-------------EKLYWTDSETNRIEVSNLDGSLR--KVL--FWQELDQPRAIALDPSS---GFMYWTDWGEVP 145 (318)
T ss_dssp EETTT-------------TEEEEEETTTTEEEEEETTSCSC--EEE--ECSSCSSEEEEEEEGGG---TEEEEEECSSSC
T ss_pred EEcCC-------------CeEEEEECCCCEEEEEECCCCcE--EEE--EeCCCCCccEEEEeCCC---CEEEEEecCCCC
Confidence 44432 14455656667788888654321 111 11222234788888853 23444432 245
Q ss_pred cEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeC-CCcEEEeE
Q 036510 236 KVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADG-NNNVTLWE 286 (288)
Q Consensus 236 ~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~-d~~v~~w~ 286 (288)
.|...+..-. ....++..--...+.++++|++..|..++. .+.|..++
T Consensus 146 ~I~r~~~dG~---~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d 194 (318)
T 3sov_A 146 KIERAGMDGS---SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN 194 (318)
T ss_dssp EEEEEETTSC---SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEEEEcCCC---CeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEc
Confidence 5666554311 111222222235689999998888888765 45677665
No 306
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=91.55 E-value=7.9 Score=35.22 Aligned_cols=21 Identities=14% Similarity=0.173 Sum_probs=17.9
Q ss_pred CEEEEeeCCCcEEEeecCCCC
Q 036510 70 SILASCSFDGTVIIWKEGNSN 90 (288)
Q Consensus 70 ~~l~s~s~d~~v~iwd~~~~~ 90 (288)
.+++.++.+|.+.++|..+++
T Consensus 337 ~~v~~~~~~G~l~~lD~~tG~ 357 (582)
T 1flg_A 337 KATAHADRNGFFYVVDRSNGK 357 (582)
T ss_dssp EEEEEECTTSEEEEEETTTCC
T ss_pred EEEEEECCCceEEEEECCCCC
Confidence 378889999999999988765
No 307
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.28 E-value=5.7 Score=33.12 Aligned_cols=53 Identities=8% Similarity=-0.022 Sum_probs=26.9
Q ss_pred CCCEEEEeeC-C---------CcEEEEEeCCCCceeeEEEe-ccccCeEEEEecCCCCCCEEEEeeCC
Q 036510 22 YGKRLATASS-D---------YSIKIIGVGNNTSQHLAKLS-GHKGAVWEVAWAHPKFGSILASCSFD 78 (288)
Q Consensus 22 ~g~~l~s~~~-d---------~~i~lwd~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~s~d 78 (288)
++++++.|+. + ..+.+||........+..+. ........+.. ++.+++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVH----NGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEE----TTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEE----CCEEEEEeCcC
Confidence 4677777776 2 45777777544333333222 11111122222 26788888765
No 308
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=91.10 E-value=11 Score=35.86 Aligned_cols=162 Identities=11% Similarity=-0.015 Sum_probs=83.5
Q ss_pred cceEEEEEcCC-CCEEEEeeCCCcEEEEEeCCCC--ceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCC
Q 036510 12 DTVHDVAMDYY-GKRLATASSDYSIKIIGVGNNT--SQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGN 88 (288)
Q Consensus 12 ~~v~~~~~s~~-g~~l~s~~~d~~i~lwd~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~ 88 (288)
..+..+.|++. ++++++-...+.|+.+++++.. ......+........+|++... .++++++-...+.|.+.++..
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~-~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI-HSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT-TTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec-CCcEEEEecCCCeEEEEeCCC
Confidence 34567788774 4455555556777777765321 0112222222334566777543 256777777888999988753
Q ss_pred CCceEEeEEeecCCCceeEEEeccCCCCeEEEEE-eCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCcee
Q 036510 89 SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACG-SSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV 167 (288)
Q Consensus 89 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~ 167 (288)
.. ....+.........|++.|.. +.++.+- +..+.|...++.- ... .......-.....|+++|...
T Consensus 503 ~~---~~~l~~~~l~~P~gIaVDp~~-g~LYwtD~g~~~~I~~~~~dG--~~~-~~lv~~~l~~P~GLavD~~~~----- 570 (791)
T 3m0c_C 503 VK---RKTLFRENGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLNG--VDI-YSLVTENIQWPNGITLDLLSG----- 570 (791)
T ss_dssp SS---EEEEEECTTCCEEEEEEETTT-TEEEEEECSSSCEEEEEETTS--CCE-EEEECSSCSCEEEEEEETTTT-----
T ss_pred Ce---EEEEEeCCCCCcceEEEecCC-CCEEEecCCCCCeEEEEecCC--Cce-EEEEeCCCCCceEEEEecCCC-----
Confidence 32 112223334457899999864 4444443 2225666666532 111 112111112345666665541
Q ss_pred cccccCCCceeEEeecCCcEEEEEEeC
Q 036510 168 GSGFLDPVQKLCSGGCDNTVKVWKLYN 194 (288)
Q Consensus 168 ~~~~~~~~~~l~s~~~d~~i~iwd~~~ 194 (288)
.+.++-...+.|...|+..
T Consensus 571 --------~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 571 --------RLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp --------EEEEEETTTTEEEEEETTS
T ss_pred --------eEEEEeCCCCcEEEEecCC
Confidence 3344444456677777644
No 309
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=89.14 E-value=10 Score=32.59 Aligned_cols=229 Identities=9% Similarity=-0.044 Sum_probs=114.8
Q ss_pred EEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCc-eEEeEEeecCCC
Q 036510 25 RLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNE-WIKDHVFEDHKS 103 (288)
Q Consensus 25 ~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~-~~~~~~~~~h~~ 103 (288)
+|+-+. ...|+..+++..... .+......+.+++|.+. .+.++.+-...+.|..+++..... ......+.....
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~---~~~~~~~~~~~l~~d~~-~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 159 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYT---SLIPNLRNVVALDTEVA-SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 159 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCE---EEECSCSCEEEEEEETT-TTEEEEEETTTTEEEEEEC------CCCEEEECSSCS
T ss_pred eeEEec-cceeEEEccCCccee---EeccccCcceEEeeeec-cCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCC
Confidence 444333 356777776543222 22334556789999753 356667766778888888753110 001122222334
Q ss_pred ceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeec
Q 036510 104 SVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGC 183 (288)
Q Consensus 104 ~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~ 183 (288)
....+++.+.. +.++.+-...+.|.+.++... ... ......-.....|+..|... .++++-..
T Consensus 160 ~p~glavD~~~-~~lY~~d~~~~~I~~~~~~g~--~~~-~l~~~~~~~P~~iavdp~~g-------------~ly~td~~ 222 (400)
T 3p5b_L 160 APDGLAVDWIH-SNIYWTDSVLGTVSVADTKGV--KRK-TLFRENGSKPRAIVVDPVHG-------------FMYWTDWG 222 (400)
T ss_dssp CEEEEEEETTT-TEEEEEETTTTEEEEECTTTC--SEE-EEEECSSCCEEEEEEETTTT-------------EEEEEECS
T ss_pred CcccEEEEecC-CceEEEECCCCeEEEEeCCCC--ceE-EEEeCCCCCcceEEEecccC-------------eEEEEeCC
Confidence 56778877643 455555566677877776432 111 11111223356777777541 33344322
Q ss_pred -CCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeecc--ccC
Q 036510 184 -DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDF--KTP 260 (288)
Q Consensus 184 -d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~--~~~ 260 (288)
.+.|...++..... ...+ ...-..-+.++++|+. +.+.++=+..+.|...++.-.. ....+... -..
T Consensus 223 ~~~~I~~~~~dG~~~-~~~~---~~~l~~P~glavd~~~---~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~l~~ 292 (400)
T 3p5b_L 223 TPAKIKKGGLNGVDI-YSLV---TENIQWPNGITLDLLS---GRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAH 292 (400)
T ss_dssp SSCCEEEEETTSCSC-EEEE---CSSCSCEEEEEEETTT---TEEEEEETTTTEEEEEETTSCC---CEEEEECSSTTSS
T ss_pred CCCEEEEEeCCCCcc-EEEE---ECCCCceEEEEEEeCC---CEEEEEECCCCEEEEEeCCCCc---cEEEEeCCCCCCC
Confidence 35666666543211 1111 1122345789999864 3455555566778888765321 11222211 123
Q ss_pred eEEEEeecCCCEEEEEeCCCcEEEeE
Q 036510 261 VYRVSWSLTGNILAVADGNNNVTLWE 286 (288)
Q Consensus 261 i~~~~~spdg~~l~s~~~d~~v~~w~ 286 (288)
...++. ..+..+.+-...+.|..++
T Consensus 293 P~gl~v-~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 293 PFSLAV-FEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp EEEEEE-ETTEEEEEESSSCSEEEEE
T ss_pred CEEEEE-eCCEEEEecCCCCeEEEEE
Confidence 456665 2333444444556666655
No 310
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=88.80 E-value=8.6 Score=31.40 Aligned_cols=106 Identities=7% Similarity=0.008 Sum_probs=52.1
Q ss_pred CCCEEEEeeCC--------CcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeC------CCcEEEeecC
Q 036510 22 YGKRLATASSD--------YSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSF------DGTVIIWKEG 87 (288)
Q Consensus 22 ~g~~l~s~~~d--------~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~------d~~v~iwd~~ 87 (288)
+++.++.|+.+ ..+.+||......+.+..+......-..+.. ++.+++.|+. -..+.++|+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~yd~~ 173 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSH----MDLVYVIGGKGSDRKCLNKMCVYDPK 173 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE----TTEEEEECCBCTTSCBCCCEEEEETT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEE----CCEEEEEeCCCCCCcccceEEEEeCC
Confidence 46666667642 3477777654333333222211111122222 2567777776 2467888876
Q ss_pred CCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCC-----cEEEEeecCC
Q 036510 88 NSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG-----NISVFTARAD 136 (288)
Q Consensus 88 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~-----~i~i~d~~~~ 136 (288)
+ +.|.....++..+..-.++.+ + +.+++.|+.++ .+..||+.++
T Consensus 174 ~-~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 174 K-FEWKELAPMQTARSLFGATVH--D--GRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp T-TEEEECCCCSSCCBSCEEEEE--T--TEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred C-CeEEECCCCCCchhceEEEEE--C--CEEEEEeccCCCCccceEEEEECCCC
Confidence 5 445443333322222222222 2 45666666544 4677777643
No 311
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=88.60 E-value=10 Score=32.02 Aligned_cols=75 Identities=12% Similarity=0.116 Sum_probs=43.4
Q ss_pred ceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEE----eccccCeEEEEecCC--CCCCEEEEee--CCCcEEEe
Q 036510 13 TVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKL----SGHKGAVWEVAWAHP--KFGSILASCS--FDGTVIIW 84 (288)
Q Consensus 13 ~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~----~~h~~~v~~~~~~~~--~~~~~l~s~s--~d~~v~iw 84 (288)
.-..++|.|+|+++++--..+.|++++........+..+ .........|++.++ .++.+.++-+ .+..|.-|
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 336789999999777665588888776433222222222 123456789999753 2355555433 34455555
Q ss_pred ecC
Q 036510 85 KEG 87 (288)
Q Consensus 85 d~~ 87 (288)
...
T Consensus 113 ~~~ 115 (347)
T 3das_A 113 LYD 115 (347)
T ss_dssp EBC
T ss_pred EeC
Confidence 443
No 312
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=88.29 E-value=9.4 Score=31.18 Aligned_cols=63 Identities=11% Similarity=0.176 Sum_probs=33.2
Q ss_pred CCEEEEeeCC--------CcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeC-C-----CcEEEEeec
Q 036510 69 GSILASCSFD--------GTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSS-D-----GNISVFTAR 134 (288)
Q Consensus 69 ~~~l~s~s~d--------~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~-d-----~~i~i~d~~ 134 (288)
+.+++.|+.+ ..+.++|..+ +.|.....++..+..-.++. . + +.+++.|+. + +.+..||+.
T Consensus 99 ~~lyv~GG~~~~~~~~~~~~~~~~d~~~-~~W~~~~~~p~~r~~~~~~~-~-~--~~iyv~GG~~~~~~~~~~~~~yd~~ 173 (315)
T 4asc_A 99 NSIYVVGGREIKDGERCLDSVMCYDRLS-FKWGESDPLPYVVYGHTVLS-H-M--DLVYVIGGKGSDRKCLNKMCVYDPK 173 (315)
T ss_dssp TEEEEECCEESSTTCCBCCCEEEEETTT-TEEEECCCCSSCCBSCEEEE-E-T--TEEEEECCBCTTSCBCCCEEEEETT
T ss_pred CEEEEEeCCcCCCCCcccceEEEECCCC-CcEeECCCCCCcccceeEEE-E-C--CEEEEEeCCCCCCcccceEEEEeCC
Confidence 5677777743 4577888765 34544333332222222222 2 2 456666765 2 357778876
Q ss_pred CC
Q 036510 135 AD 136 (288)
Q Consensus 135 ~~ 136 (288)
+.
T Consensus 174 ~~ 175 (315)
T 4asc_A 174 KF 175 (315)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 313
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=88.18 E-value=15 Score=33.50 Aligned_cols=65 Identities=8% Similarity=0.010 Sum_probs=35.6
Q ss_pred CEEEEeeC-CCcEEEeec-CCCCceEEeEEeecCCC-----------ceeEEEeccCCC--CeEEEEEeCCCcEEEEeec
Q 036510 70 SILASCSF-DGTVIIWKE-GNSNEWIKDHVFEDHKS-----------SVNSIDWAPHEL--GLCLACGSSDGNISVFTAR 134 (288)
Q Consensus 70 ~~l~s~s~-d~~v~iwd~-~~~~~~~~~~~~~~h~~-----------~v~~l~~~p~~~--~~~l~sg~~d~~i~i~d~~ 134 (288)
..+..++. ++.|.-+|. .+++. ...+..... ....+.+.|.+. ..++..++.|+.|.-+|.+
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~---lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~ 139 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTI---LWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAE 139 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSE---EEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETT
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcE---EEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECC
Confidence 34555555 788888888 77653 222221110 012244433321 1226677889999888887
Q ss_pred CCC
Q 036510 135 ADG 137 (288)
Q Consensus 135 ~~~ 137 (288)
++.
T Consensus 140 TG~ 142 (599)
T 1w6s_A 140 TGE 142 (599)
T ss_dssp TCC
T ss_pred CCC
Confidence 764
No 314
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=87.26 E-value=13 Score=31.80 Aligned_cols=203 Identities=10% Similarity=-0.024 Sum_probs=103.2
Q ss_pred cceEEEEEcCCC-CEEEEeeCCCcEEEEEeCCCC--ceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCC
Q 036510 12 DTVHDVAMDYYG-KRLATASSDYSIKIIGVGNNT--SQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGN 88 (288)
Q Consensus 12 ~~v~~~~~s~~g-~~l~s~~~d~~i~lwd~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~ 88 (288)
..+..++|++.+ +++.+-...+.|+.++.++.. ......+.........+++... .+.++++-...+.|.+.++..
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~-~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI-HSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT-TTEEEEEETTTTEEEEECTTT
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec-CCceEEEECCCCeEEEEeCCC
Confidence 455678888754 444444456777777765311 0111122223345567777642 366777777788898888753
Q ss_pred CCceEEeEEeecCCCceeEEEeccCCCCeEEEEE-eCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCcee
Q 036510 89 SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACG-SSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV 167 (288)
Q Consensus 89 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~ 167 (288)
.. ....+.........|++.|.. +.++.+- +..+.|...++.-... .......-.....|+++|...
T Consensus 191 ~~---~~~l~~~~~~~P~~iavdp~~-g~ly~td~~~~~~I~~~~~dG~~~---~~~~~~~l~~P~glavd~~~~----- 258 (400)
T 3p5b_L 191 VK---RKTLFRENGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLNGVDI---YSLVTENIQWPNGITLDLLSG----- 258 (400)
T ss_dssp CS---EEEEEECSSCCEEEEEEETTT-TEEEEEECSSSCCEEEEETTSCSC---EEEECSSCSCEEEEEEETTTT-----
T ss_pred Cc---eEEEEeCCCCCcceEEEeccc-CeEEEEeCCCCCEEEEEeCCCCcc---EEEEECCCCceEEEEEEeCCC-----
Confidence 32 112223233457889999864 4444443 2235676666542211 111111112356677777652
Q ss_pred cccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEe
Q 036510 168 GSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV 242 (288)
Q Consensus 168 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~ 242 (288)
.+.++-...+.|...|+.... ....+ ...+.-..-..+.... +..+++-...+.|..++.
T Consensus 259 --------~lY~aD~~~~~I~~~d~dG~~-~~~~~-~~~~~l~~P~gl~v~~-----~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 259 --------RLYWVDSKLHSISSIDVNGGN-RKTIL-EDEKRLAHPFSLAVFE-----DKVFWTDIINEAIFSANR 318 (400)
T ss_dssp --------EEEEEETTTTEEEEEETTSCC-CEEEE-ECSSTTSSEEEEEEET-----TEEEEEESSSCSEEEEES
T ss_pred --------EEEEEECCCCEEEEEeCCCCc-cEEEE-eCCCCCCCCEEEEEeC-----CEEEEecCCCCeEEEEEc
Confidence 344454556678888865431 11111 1111111223555533 245666666677777774
No 315
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=87.18 E-value=8.9 Score=32.23 Aligned_cols=106 Identities=12% Similarity=0.172 Sum_probs=54.6
Q ss_pred eeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeecc---ccCCcceEEEEecCCCCCCCcEE
Q 036510 152 VTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPAL---QMHTDWVRDVAWAPNLGLPKSTI 228 (288)
Q Consensus 152 v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~---~~h~~~V~~v~~sp~~~~~~~~l 228 (288)
-..+.|.|++ +++++ ..++.|.+++ .+.. +.+..+ .........++|+|+....+...
T Consensus 33 P~~ia~~pdG--------------~l~V~-e~~g~I~~i~--~g~~--~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lY 93 (352)
T 2ism_A 33 PWALAFLPDG--------------GMLIA-ERPGRIRLFR--EGRL--STYAELSVYHRGESGLLGLALHPRFPQEPYVY 93 (352)
T ss_dssp EEEEEECTTS--------------CEEEE-ETTTEEEEEE--TTEE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEE
T ss_pred ceEEEEcCCC--------------eEEEE-eCCCeEEEEE--CCCc--cEeecceEeecCCCCceeEEECCCCCCCCEEE
Confidence 4678888886 44444 4568888887 4321 111111 11223468899999732112444
Q ss_pred EEEeCC-----CcEEEEEeecCCCcccceEeeccc------cCeEEEEeecCCCEEEEE
Q 036510 229 ASASED-----GKVIIWTVAREGDQWEGKVLHDFK------TPVYRVSWSLTGNILAVA 276 (288)
Q Consensus 229 ~s~s~D-----~~i~iw~~~~~~~~~~~~~~~~~~------~~i~~~~~spdg~~l~s~ 276 (288)
++-..+ ..|..++...........++.... .....++|.|||.+.++-
T Consensus 94 v~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 94 AYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 554433 556667665211000111121111 123589999999765553
No 316
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=84.55 E-value=24 Score=32.33 Aligned_cols=220 Identities=8% Similarity=-0.028 Sum_probs=114.2
Q ss_pred CCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEe
Q 036510 31 SDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDW 110 (288)
Q Consensus 31 ~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~ 110 (288)
....|+.-+++.........+.+ -..+.+++|.+. .+.++.+-..++.|..+++.... . ...+.........+++
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~-~~~~~~l~~d~~-~~~lywtD~~~~~I~r~~~~g~~-~--~~v~~~g~~~P~GlAv 87 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTG-VKEASALDFDVT-DNRIYWTDISLKTISRAFMNGSA-L--EHVVEFGLDYPEGMAV 87 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCS-CSCEEEEEEETT-TTEEEEEETTTTEEEEEETTSCS-C--EEEECSSCSCCCEEEE
T ss_pred eCCcEEEEECCCCCcceEEEcCC-CCceEEEEEECC-CCEEEEEECCCCeEEEEECCCCC-c--EEEEeCCCCCcceEEE
Confidence 45677777776432222212222 345788999754 46777777788999888875332 1 1122222234667777
Q ss_pred ccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEe-ecCCcEEE
Q 036510 111 APHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSG-GCDNTVKV 189 (288)
Q Consensus 111 ~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~-~~d~~i~i 189 (288)
.+.. +.++.+-...+.|.+.++..... . ......-.....|+..|... .++++- +....|..
T Consensus 88 D~~~-~~LY~tD~~~~~I~v~~~dG~~~--~-~l~~~~l~~P~~iavdp~~G-------------~lY~tD~g~~~~I~r 150 (628)
T 4a0p_A 88 DWLG-KNLYWADTGTNRIEVSKLDGQHR--Q-VLVWKDLDSPRALALDPAEG-------------FMYWTEWGGKPKIDR 150 (628)
T ss_dssp ETTT-TEEEEEETTTTEEEEEETTSTTC--E-EEECSSCCCEEEEEEETTTT-------------EEEEEECSSSCEEEE
T ss_pred EeCC-CEEEEEECCCCEEEEEecCCCcE--E-EEEeCCCCCcccEEEccCCC-------------eEEEeCCCCCCEEEE
Confidence 6653 45555556667788877643211 1 11112223456777777541 333332 22345555
Q ss_pred EEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecC
Q 036510 190 WKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLT 269 (288)
Q Consensus 190 wd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spd 269 (288)
.++.... .+.+. . .-.+-+.+.+.++. +.+.++=...+.|...++.... . +.+...-.....+++..
T Consensus 151 ~~~dG~~--~~~l~--~-~~~~P~GlalD~~~---~~LY~aD~~~~~I~~~d~dG~~-~---~v~~~~l~~P~glav~~- 217 (628)
T 4a0p_A 151 AAMDGSE--RTTLV--P-NVGRANGLTIDYAK---RRLYWTDLDTNLIESSNMLGLN-R---EVIADDLPHPFGLTQYQ- 217 (628)
T ss_dssp EETTSCS--CEEEE--C-SCSSEEEEEEETTT---TEEEEEETTTTEEEEEETTSCS-C---EEEEECCSCEEEEEEET-
T ss_pred EeCCCCc--eEEEE--C-CCCCcceEEEcccc---CEEEEEECCCCEEEEEcCCCCc-e---EEeeccCCCceEEEEEC-
Confidence 5543321 11111 1 22345788998864 3455555566778888765321 1 22222223445677654
Q ss_pred CCEEEEEe-CCCcEEEeE
Q 036510 270 GNILAVAD-GNNNVTLWE 286 (288)
Q Consensus 270 g~~l~s~~-~d~~v~~w~ 286 (288)
..+..++ ..+.|...|
T Consensus 218 -~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 218 -DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp -TEEEEEETTTTEEEEEE
T ss_pred -CEEEEecCCCCEEEEEE
Confidence 3444444 356666554
No 317
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=84.42 E-value=26 Score=32.55 Aligned_cols=111 Identities=11% Similarity=0.114 Sum_probs=58.0
Q ss_pred CCCEEEEeeCCC------cEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCC--cEEEeecCCCCceE
Q 036510 22 YGKRLATASSDY------SIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDG--TVIIWKEGNSNEWI 93 (288)
Q Consensus 22 ~g~~l~s~~~d~------~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~--~v~iwd~~~~~~~~ 93 (288)
+++.++.||.++ .+.+||........+..+......-..+.+ . ++.+++.|+.++ .+.+||..+ +.|.
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~-~--~~~iyv~GG~~~~~~v~~yd~~t-~~W~ 526 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSL-P--DGNVLILGGVTEGPAMLLYNVTE-EIFK 526 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEEC-T--TSCEEEECCBCSSCSEEEEETTT-TEEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEE-c--CCEEEEECCCCCCCCEEEEECCC-CceE
Confidence 677778777543 466777654333333222211111122222 2 367888887655 688888865 4464
Q ss_pred EeEE---eecCCCceeEEEeccCCCCeEEEEEeC--C-----CcEEEEeecCCC
Q 036510 94 KDHV---FEDHKSSVNSIDWAPHELGLCLACGSS--D-----GNISVFTARADG 137 (288)
Q Consensus 94 ~~~~---~~~h~~~v~~l~~~p~~~~~~l~sg~~--d-----~~i~i~d~~~~~ 137 (288)
.... ++..+..-.++.+... .+.+++.|+. + +.+..||+.++.
T Consensus 527 ~~~~~g~~p~~r~~~~a~v~~~~-~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 527 DVTPKDEFFQNSLVSAGLEFDPV-SKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp ECCCSSGGGGSCCBSCEEEEETT-TTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EccCCCCCCCcccceeEEEEeCC-CCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 4332 2222222233444433 2456666765 2 457888887654
No 318
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=83.20 E-value=23 Score=31.00 Aligned_cols=55 Identities=13% Similarity=0.224 Sum_probs=30.1
Q ss_pred CceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEee-cc-----CCCCeeEEEeCCC
Q 036510 103 SSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRID-QA-----HPVGVTSVSWAPS 160 (288)
Q Consensus 103 ~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~-~~-----~~~~v~~i~~~p~ 160 (288)
...+.++|.|+ +.++++-...+.|++++...+ ........ .. .......|+|+|+
T Consensus 27 ~~P~~~a~~pd--G~l~V~e~~gg~I~~~~~~~g-~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 27 NKPHALLWGPD--NQIWLTERATGKILRVNPESG-SVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SSEEEEEECTT--SCEEEEETTTCEEEEECTTTC-CEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEcCC--CcEEEEEcCCCEEEEEECCCC-cEeEEecCCccccccCCCCceeEEEECCC
Confidence 45679999998 565555433346777764322 22222111 11 1234668888886
No 319
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=82.45 E-value=20 Score=29.64 Aligned_cols=223 Identities=7% Similarity=-0.019 Sum_probs=111.0
Q ss_pred CCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEeecCCCceeEEEec
Q 036510 32 DYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWA 111 (288)
Q Consensus 32 d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~ 111 (288)
...|+..+++.........+.+ .....++.|.+. .+.++.+-...+.|..+++...... ...+.........+++.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~-~~~~~~ld~d~~-~~~lyw~D~~~~~I~r~~~~g~~~~--~~~~~~~l~~p~glavd 87 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGG-LEDAAAVDFVFS-HGLIYWSDVSEEAIKRTEFNKTESV--QNVVVSGLLSPDGLACD 87 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEE-EEEEEEEEEEGG-GTEEEEEETTTTEEEEEETTSSSCC--CEEEEECCSCCCEEEEE
T ss_pred cCeEEEEECCCCceEEEEEecC-CCccEEEEEEeC-CCEEEEEECCCCcEEEEEccCCCce--EEEEcCCCCCccEEEEE
Confidence 3567777776432111111222 234568888753 3567777777888988887543211 11122222345677777
Q ss_pred cCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEe-ecCCcEEEE
Q 036510 112 PHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSG-GCDNTVKVW 190 (288)
Q Consensus 112 p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~-~~d~~i~iw 190 (288)
+.. +.++.+-...+.|.++++..... . ......-.....|+..|... .++++- +..+.|...
T Consensus 88 ~~~-g~ly~~d~~~~~I~~~~~dG~~~--~-~l~~~~~~~P~giavdp~~g-------------~ly~td~~~~~~I~r~ 150 (318)
T 3sov_A 88 WLG-EKLYWTDSETNRIEVSNLDGSLR--K-VLFWQELDQPRAIALDPSSG-------------FMYWTDWGEVPKIERA 150 (318)
T ss_dssp TTT-TEEEEEETTTTEEEEEETTSCSC--E-EEECSSCSSEEEEEEEGGGT-------------EEEEEECSSSCEEEEE
T ss_pred cCC-CeEEEEECCCCEEEEEECCCCcE--E-EEEeCCCCCccEEEEeCCCC-------------EEEEEecCCCCEEEEE
Confidence 643 45555555667888887653211 1 11112223345666666531 233333 224556666
Q ss_pred EEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCcccceEeeccccCeEEEEeecCC
Q 036510 191 KLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTG 270 (288)
Q Consensus 191 d~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg 270 (288)
++..... ...+ ...-..-+.++++|+. +.+.++=+..+.|..+++.-.. ....+.+.......+++. .+
T Consensus 151 ~~dG~~~-~~~~---~~~l~~Pnglavd~~~---~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~P~glav~-~~ 219 (318)
T 3sov_A 151 GMDGSSR-FIII---NSEIYWPNGLTLDYEE---QKLYWADAKLNFIHKSNLDGTN---RQAVVKGSLPHPFALTLF-ED 219 (318)
T ss_dssp ETTSCSC-EEEE---CSSCSCEEEEEEETTT---TEEEEEETTTTEEEEEETTSCS---CEEEECSCCSCEEEEEEE-TT
T ss_pred EcCCCCe-EEEE---ECCCCCccEEEEeccC---CEEEEEECCCCEEEEEcCCCCc---eEEEecCCCCCceEEEEe-CC
Confidence 6543211 1111 1112234789999864 3455565667788888865221 112222122345566663 22
Q ss_pred CEEEEEeCCCcEEEeE
Q 036510 271 NILAVADGNNNVTLWE 286 (288)
Q Consensus 271 ~~l~s~~~d~~v~~w~ 286 (288)
..+.+-...+.|..++
T Consensus 220 ~lywtd~~~~~V~~~~ 235 (318)
T 3sov_A 220 ILYWTDWSTHSILACN 235 (318)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred EEEEEecCCCeEEEEE
Confidence 3333333455666554
No 320
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=82.22 E-value=19 Score=29.33 Aligned_cols=109 Identities=14% Similarity=0.166 Sum_probs=51.6
Q ss_pred CCCEEEEeeCC-------CcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeC------CCcEEEeecCC
Q 036510 22 YGKRLATASSD-------YSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSF------DGTVIIWKEGN 88 (288)
Q Consensus 22 ~g~~l~s~~~d-------~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~------d~~v~iwd~~~ 88 (288)
++++++.|+.+ ..+.+||......+.+..+......-..+.. ++.+++.|+. -..+.++|+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~yd~~~ 184 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISH----NGMIYCLGGKTDDKKCTNRVFIYNPKK 184 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEE----TTEEEEECCEESSSCBCCCEEEEETTT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEE----CCEEEEEcCCCCCCCccceEEEEcCCC
Confidence 46677777754 2366666644333332222111111112222 2567777764 24588888865
Q ss_pred CCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCC-----CcEEEEeecCCCCee
Q 036510 89 SNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSD-----GNISVFTARADGGWD 140 (288)
Q Consensus 89 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d-----~~i~i~d~~~~~~~~ 140 (288)
+.|.....++..+....++.+ + +.+++.|+.+ +.+.+||+.++ .|.
T Consensus 185 -~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~ 235 (318)
T 2woz_A 185 -GDWKDLAPMKTPRSMFGVAIH--K--GKIVIAGGVTEDGLSASVEAFDLKTN-KWE 235 (318)
T ss_dssp -TEEEEECCCSSCCBSCEEEEE--T--TEEEEEEEEETTEEEEEEEEEETTTC-CEE
T ss_pred -CEEEECCCCCCCcccceEEEE--C--CEEEEEcCcCCCCccceEEEEECCCC-eEE
Confidence 446544333222222222222 2 4556666543 24667777653 353
No 321
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=80.14 E-value=22 Score=28.86 Aligned_cols=63 Identities=10% Similarity=0.212 Sum_probs=31.7
Q ss_pred CCEEEEeeCC-------CcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeC------CCcEEEEeecC
Q 036510 69 GSILASCSFD-------GTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSS------DGNISVFTARA 135 (288)
Q Consensus 69 ~~~l~s~s~d-------~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~------d~~i~i~d~~~ 135 (288)
+.+++.|+.+ ..+.++|..+ +.|.....++..+..- ++.. .+ +.+++.|+. -+.+..||+.+
T Consensus 110 ~~iyv~GG~~~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~-~~~~-~~--~~iyv~GG~~~~~~~~~~~~~yd~~~ 184 (318)
T 2woz_A 110 DKIYVVAGKDLQTEASLDSVLCYDPVA-AKWSEVKNLPIKVYGH-NVIS-HN--GMIYCLGGKTDDKKCTNRVFIYNPKK 184 (318)
T ss_dssp TEEEEEEEEBTTTCCEEEEEEEEETTT-TEEEEECCCSSCEESC-EEEE-ET--TEEEEECCEESSSCBCCCEEEEETTT
T ss_pred CEEEEEcCccCCCCcccceEEEEeCCC-CCEeECCCCCCccccc-EEEE-EC--CEEEEEcCCCCCCCccceEEEEcCCC
Confidence 5677777754 3466777754 3454433222111111 1222 12 455666653 23578888765
Q ss_pred C
Q 036510 136 D 136 (288)
Q Consensus 136 ~ 136 (288)
+
T Consensus 185 ~ 185 (318)
T 2woz_A 185 G 185 (318)
T ss_dssp T
T ss_pred C
Confidence 3
No 322
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=79.25 E-value=32 Score=30.08 Aligned_cols=109 Identities=9% Similarity=0.056 Sum_probs=56.3
Q ss_pred ceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEec------cccCeEEEEecCC--CCCCEEEEeeC-------
Q 036510 13 TVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSG------HKGAVWEVAWAHP--KFGSILASCSF------- 77 (288)
Q Consensus 13 ~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~------h~~~v~~~~~~~~--~~~~~l~s~s~------- 77 (288)
.-.+++|.|+|+++++-...+.|++.+........+..+.. ....+..|+|.++ .++.+.++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 34588999999977765444567766543222223333321 2456778999753 13556666543
Q ss_pred -----CCcEEEeecCCCC-ce----EEeEEeec-CCCceeEEEeccCCCCeEEEEE
Q 036510 78 -----DGTVIIWKEGNSN-EW----IKDHVFED-HKSSVNSIDWAPHELGLCLACG 122 (288)
Q Consensus 78 -----d~~v~iwd~~~~~-~~----~~~~~~~~-h~~~v~~l~~~p~~~~~~l~sg 122 (288)
...|.-++..... .. .....+.. .......|.|.|++ ..+++.|
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG-~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQ-KIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTS-CEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCC-eEEEEEC
Confidence 1244444443221 11 01111221 12247889999984 3344444
No 323
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=79.23 E-value=40 Score=31.25 Aligned_cols=113 Identities=8% Similarity=0.057 Sum_probs=57.0
Q ss_pred CCCCEEEEeeCC----CcEEEEEeCCCCceeeE-E-----EeccccCeEEEEecCCCCCCEEEEeeCCC------cEEEe
Q 036510 21 YYGKRLATASSD----YSIKIIGVGNNTSQHLA-K-----LSGHKGAVWEVAWAHPKFGSILASCSFDG------TVIIW 84 (288)
Q Consensus 21 ~~g~~l~s~~~d----~~i~lwd~~~~~~~~~~-~-----~~~h~~~v~~~~~~~~~~~~~l~s~s~d~------~v~iw 84 (288)
.++..++.||.+ ..+.+||........+. . +......-..+.... ++.+++.|+.++ .+.+|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~--~~~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR--NNQLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT--TTEEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc--CCEEEEEcCCCCCCCccccEEEE
Confidence 456777777754 45777887554443333 1 111011112233311 267778777543 46677
Q ss_pred ecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCC--cEEEEeecCCCCee
Q 036510 85 KEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDG--NISVFTARADGGWD 140 (288)
Q Consensus 85 d~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~--~i~i~d~~~~~~~~ 140 (288)
|..+ +.|.....++..+..-.++.+. + +.+++.|+.++ .+.+||+.++ .|.
T Consensus 474 d~~t-~~W~~~~~~p~~R~~h~~~~~~-~--~~iyv~GG~~~~~~v~~yd~~t~-~W~ 526 (695)
T 2zwa_A 474 DMKT-REWSMIKSLSHTRFRHSACSLP-D--GNVLILGGVTEGPAMLLYNVTEE-IFK 526 (695)
T ss_dssp ETTT-TEEEECCCCSBCCBSCEEEECT-T--SCEEEECCBCSSCSEEEEETTTT-EEE
T ss_pred eCCC-CcEEECCCCCCCcccceEEEEc-C--CEEEEECCCCCCCCEEEEECCCC-ceE
Confidence 7754 3454443333222222223222 3 55667776554 6888888754 353
No 324
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=77.11 E-value=30 Score=28.59 Aligned_cols=95 Identities=12% Similarity=0.091 Sum_probs=45.9
Q ss_pred CCCEEEEeeCC-CcEEEEEeCC--CCceeeEEEe-ccccCeEEEEecCCCCCCEEEEeeC-C---------CcEEEeecC
Q 036510 22 YGKRLATASSD-YSIKIIGVGN--NTSQHLAKLS-GHKGAVWEVAWAHPKFGSILASCSF-D---------GTVIIWKEG 87 (288)
Q Consensus 22 ~g~~l~s~~~d-~~i~lwd~~~--~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~s~-d---------~~v~iwd~~ 87 (288)
++++++.|+.+ ..+..+|... .....+..+. .....-..+.. ++.+++.|+. + ..+.++|+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~ 94 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI----DGNLYVFGGIGKNSEGLTQVFNDVHKYNPK 94 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE----TTEEEEECCEEECTTSCEEECCCEEEEETT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE----CCEEEEEcCCCCCCCccceeeccEEEEeCC
Confidence 57777777654 4577777642 2233332222 11111122222 2567777775 2 467788876
Q ss_pred CCCceEEeEEee-cCCCceeEEEeccCCCCeEEEEEeCC
Q 036510 88 NSNEWIKDHVFE-DHKSSVNSIDWAPHELGLCLACGSSD 125 (288)
Q Consensus 88 ~~~~~~~~~~~~-~h~~~v~~l~~~p~~~~~~l~sg~~d 125 (288)
+ +.|.....+. ..+..-.++. .+ +.+++.|+.+
T Consensus 95 ~-~~W~~~~~~~p~~r~~~~~~~--~~--~~iyv~GG~~ 128 (357)
T 2uvk_A 95 T-NSWVKLMSHAPMGMAGHVTFV--HN--GKAYVTGGVN 128 (357)
T ss_dssp T-TEEEECSCCCSSCCSSEEEEE--ET--TEEEEEECCC
T ss_pred C-CcEEECCCCCCcccccceEEE--EC--CEEEEEeCcC
Confidence 5 4454433332 1111122222 22 5667777754
No 325
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=72.69 E-value=29 Score=27.40 Aligned_cols=62 Identities=15% Similarity=0.151 Sum_probs=37.0
Q ss_pred EEEEecCCCCCCCcEEEEEeCCCcEEEEEeecC-CCcc--cceEeeccc-cCeEEEEeecCCCEEEEEeCCCcE
Q 036510 213 RDVAWAPNLGLPKSTIASASEDGKVIIWTVARE-GDQW--EGKVLHDFK-TPVYRVSWSLTGNILAVADGNNNV 282 (288)
Q Consensus 213 ~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~-~~~~--~~~~~~~~~-~~i~~~~~spdg~~l~s~~~d~~v 282 (288)
.++-|.|++ .+-++ .|+.|.-++.-.. .+.+ ....+.... +.+..+.|.|+|.+.++. |+.+
T Consensus 91 ~a~~fD~~G----~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 91 QFLFFDPNG----YLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp SEEEECTTS----CEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred eEEEECCCC----CEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 678888874 33433 6688766654211 1111 122222211 357899999999999888 6663
No 326
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=69.71 E-value=92 Score=30.94 Aligned_cols=223 Identities=11% Similarity=0.071 Sum_probs=0.0
Q ss_pred CcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCC-CCEEEEee----------CCCcEEEeecCCCCceEEeEEeecC
Q 036510 33 YSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKF-GSILASCS----------FDGTVIIWKEGNSNEWIKDHVFEDH 101 (288)
Q Consensus 33 ~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~l~s~s----------~d~~v~iwd~~~~~~~~~~~~~~~h 101 (288)
+.+++.|-.....-....+........-....-..+ ..+|+.|. ..|.|.++++. .......+... .
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~-~~kL~lv~~~~-v 884 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYS-DGKLQTVAEKE-V 884 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEE-TTEEEEEEEEE-E
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEE-CCEEEEEEEEE-c
Q ss_pred CCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEe
Q 036510 102 KSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSG 181 (288)
Q Consensus 102 ~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~ 181 (288)
+++|++++--. ++++++.+ ++|++|++...+.+. ....+-..+..+.....+ ++++.|
T Consensus 885 ~g~v~al~~~~---g~Lla~ig--~~l~vy~l~~~~~L~---~~~~~~~~i~~~~l~~~~--------------~~I~vg 942 (1158)
T 3ei3_A 885 KGAVYSMVEFN---GKLLASIN--STVRLYEWTTEKELR---TECNHYNNIMALYLKTKG--------------DFILVG 942 (1158)
T ss_dssp SSCEEEEEEET---TEEEEEET--TEEEEEEECTTSCEE---EEEEECCCSCEEEEEEET--------------TEEEEE
T ss_pred CCcCEEEeeeC---CEEEEEcC--CEEEEEECCCCceEE---EEeeccccEEEEEEeccC--------------CEEEEE
Q ss_pred ecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCC------CcccceEee
Q 036510 182 GCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREG------DQWEGKVLH 255 (288)
Q Consensus 182 ~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~------~~~~~~~~~ 255 (288)
..-+.|.+...+.....+..+.. .-+..++.++.|-.+ .+++.+-.+++|.+....... +.....-..
T Consensus 943 D~~~Sv~~~~y~~~~~~L~~~a~-D~~~~~vta~~~ld~-----~t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~f 1016 (1158)
T 3ei3_A 943 DLMRSVLLLAYKPMEGNFEEIAR-DFNPNWMSAVEILDD-----DNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLF 1016 (1158)
T ss_dssp ESSBCEEEEEEETTTTEEEEEEE-CCSCBCEEEEEEEET-----TEEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEE
T ss_pred EhhheEEEEEEEcCCCeEEEEEe-ecccccEEEEEEEcc-----CcEEEEcCCCcEEEEecCCCCCCccccceeeeEEEE
Q ss_pred ccccCeEEEE---eecCC---------CEEEEEeCCCcEEEe
Q 036510 256 DFKTPVYRVS---WSLTG---------NILAVADGNNNVTLW 285 (288)
Q Consensus 256 ~~~~~i~~~~---~spdg---------~~l~s~~~d~~v~~w 285 (288)
-.+..|+++. +.|.+ ..++.++.+|+|-+.
T Consensus 1017 hlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l 1058 (1158)
T 3ei3_A 1017 HLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLV 1058 (1158)
T ss_dssp ECSSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEE
T ss_pred eCCCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEE
No 327
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=65.77 E-value=81 Score=28.83 Aligned_cols=181 Identities=11% Similarity=-0.062 Sum_probs=94.3
Q ss_pred eCCCcEEEeecCCCCceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEE
Q 036510 76 SFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSV 155 (288)
Q Consensus 76 s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 155 (288)
+....|+..++..... .....+. ....+..|+|++.+ +.++.+-..++.|..+++.... ... ....+ -.....+
T Consensus 12 s~~~~I~~i~l~~~~~-~~~~~~~-~~~~~~~l~~d~~~-~~lywtD~~~~~I~r~~~~g~~-~~~-v~~~g-~~~P~Gl 85 (628)
T 4a0p_A 12 SRRADIRRISLETNNN-NVAIPLT-GVKEASALDFDVTD-NRIYWTDISLKTISRAFMNGSA-LEH-VVEFG-LDYPEGM 85 (628)
T ss_dssp EETTEEEEEESSCTTC-EEECCCC-SCSCEEEEEEETTT-TEEEEEETTTTEEEEEETTSCS-CEE-EECSS-CSCCCEE
T ss_pred EeCCcEEEEECCCCCc-ceEEEcC-CCCceEEEEEECCC-CEEEEEECCCCeEEEEECCCCC-cEE-EEeCC-CCCcceE
Confidence 3567888888865431 1111121 23467899999864 5666666667778777764321 111 11111 1122334
Q ss_pred EeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEE-eCC
Q 036510 156 SWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASA-SED 234 (288)
Q Consensus 156 ~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~-s~D 234 (288)
+.++.+ +++.++-...+.|.+.++...... ..+ ...-..-+.+++.|.. +.+..+- +..
T Consensus 86 AvD~~~-------------~~LY~tD~~~~~I~v~~~dG~~~~-~l~---~~~l~~P~~iavdp~~---G~lY~tD~g~~ 145 (628)
T 4a0p_A 86 AVDWLG-------------KNLYWADTGTNRIEVSKLDGQHRQ-VLV---WKDLDSPRALALDPAE---GFMYWTEWGGK 145 (628)
T ss_dssp EEETTT-------------TEEEEEETTTTEEEEEETTSTTCE-EEE---CSSCCCEEEEEEETTT---TEEEEEECSSS
T ss_pred EEEeCC-------------CEEEEEECCCCEEEEEecCCCcEE-EEE---eCCCCCcccEEEccCC---CeEEEeCCCCC
Confidence 333322 144556566677877776543211 111 1112234788999853 3344443 223
Q ss_pred CcEEEEEeecCCCcccceEeeccccCeEEEEeecCCCEEEEEeC-CCcEEEeE
Q 036510 235 GKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADG-NNNVTLWE 286 (288)
Q Consensus 235 ~~i~iw~~~~~~~~~~~~~~~~~~~~i~~~~~spdg~~l~s~~~-d~~v~~w~ 286 (288)
..|...++.-. ....+...-.....++++++++.|..++. .+.|...+
T Consensus 146 ~~I~r~~~dG~----~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d 194 (628)
T 4a0p_A 146 PKIDRAAMDGS----ERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSN 194 (628)
T ss_dssp CEEEEEETTSC----SCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CEEEEEeCCCC----ceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEc
Confidence 44555444321 11222222346789999999888888865 45666655
No 328
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=55.77 E-value=38 Score=30.83 Aligned_cols=71 Identities=13% Similarity=0.146 Sum_probs=47.1
Q ss_pred eEEEEEcCCCCEEEEee-CCCcEEEEEeCC-----------CCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcE
Q 036510 14 VHDVAMDYYGKRLATAS-SDYSIKIIGVGN-----------NTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTV 81 (288)
Q Consensus 14 v~~~~~s~~g~~l~s~~-~d~~i~lwd~~~-----------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v 81 (288)
..++.++|||++++.++ .+.++.++|++. .+........- ...-...+|.. +|....|--.|.+|
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~--~G~aYTtlfidSqv 401 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDG--RGNAYTTLFIDSQV 401 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECS--SSEEEEEETTTTEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECC--CCceEeeeeecceE
Confidence 35678999999976655 578999999851 11111222221 22345678864 47777777899999
Q ss_pred EEeecC
Q 036510 82 IIWKEG 87 (288)
Q Consensus 82 ~iwd~~ 87 (288)
.-|++.
T Consensus 402 vkWni~ 407 (638)
T 3sbq_A 402 VKWNME 407 (638)
T ss_dssp EEEEHH
T ss_pred EEEecc
Confidence 999985
No 329
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=55.61 E-value=1e+02 Score=26.96 Aligned_cols=18 Identities=6% Similarity=0.062 Sum_probs=14.0
Q ss_pred eEEEEeecCCCEEEEEeC
Q 036510 261 VYRVSWSLTGNILAVADG 278 (288)
Q Consensus 261 i~~~~~spdg~~l~s~~~ 278 (288)
...++|.|||++.++.+.
T Consensus 141 g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 141 GGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp EEEEEECTTSCEEEEECC
T ss_pred CCcEeECCCCcEEEEeCC
Confidence 578999999987666543
No 330
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=54.28 E-value=96 Score=25.97 Aligned_cols=19 Identities=26% Similarity=0.342 Sum_probs=13.0
Q ss_pred cceEEEEEcC--CCCEEEEee
Q 036510 12 DTVHDVAMDY--YGKRLATAS 30 (288)
Q Consensus 12 ~~v~~~~~s~--~g~~l~s~~ 30 (288)
..|.+|.+.| .+.+++.+.
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~ 75 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAAR 75 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEE
T ss_pred CceEEEEECCCCCCeEEEEec
Confidence 5688999998 555555443
No 331
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=51.51 E-value=87 Score=24.67 Aligned_cols=179 Identities=11% Similarity=0.110 Sum_probs=81.1
Q ss_pred CCEEEEeeCCCcEEEeecCCCC--ceE-EeEEeec-CCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCC--Cee--
Q 036510 69 GSILASCSFDGTVIIWKEGNSN--EWI-KDHVFED-HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADG--GWD-- 140 (288)
Q Consensus 69 ~~~l~s~s~d~~v~iwd~~~~~--~~~-~~~~~~~-h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~--~~~-- 140 (288)
+.+|.....| +++.=.+.... .|. ....+.. -=..+..++|+|+ +.+.+. .+|.|.-.+..+.. .|-
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~--G~LYaV--~~G~Ly~~~~~t~~~~~W~~s 78 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPG--GELYGV--LNDKIYKGTPPTHDNDNWMGR 78 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTT--SCEEEE--ETTEEEEESCCCSTTCCHHHH
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCC--ccEEEE--eCCeEEEECCCCCCccccccc
Confidence 4567777777 55443222211 120 1111211 1236789999996 555555 56766554443211 110
Q ss_pred eEEeeccCCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCc---eee--eeeeccccCCcceEEE
Q 036510 141 TSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGI---WKM--DCFPALQMHTDWVRDV 215 (288)
Q Consensus 141 ~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~---~~~--~~~~~~~~h~~~V~~v 215 (288)
..++...--.....+.|.|++ .|..+ .|+.|.-++-.+.. +.- ..+. ..-=..+..|
T Consensus 79 ~t~IG~~Gw~~F~a~~fD~~G---------------~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg--~~gw~~~~~l 140 (236)
T 1tl2_A 79 AKKIGNGGWNQFQFLFFDPNG---------------YLYAV-SKDKLYKASPPQSDTDNWIARATEVG--SGGWSGFKFL 140 (236)
T ss_dssp CEEEECSCGGGCSEEEECTTS---------------CEEEE-ETTEEEEESCCCSTTCCHHHHSEEEE--CSSGGGEEEE
T ss_pred ccEecccccccceEEEECCCC---------------CEEEe-CCCEEEEeCCCcCCCCceeccccEec--cCCCCceEEE
Confidence 011111000113567777765 34444 56877655532110 000 0000 0011247899
Q ss_pred EecCCCCCCCcEEEEEeCCCcEEEEEeecCCCc---c--cceEeeccc-cCeEEEEeecCCCEEEEEeCCC
Q 036510 216 AWAPNLGLPKSTIASASEDGKVIIWTVAREGDQ---W--EGKVLHDFK-TPVYRVSWSLTGNILAVADGNN 280 (288)
Q Consensus 216 ~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~---~--~~~~~~~~~-~~i~~~~~spdg~~l~s~~~d~ 280 (288)
.|.|++ . |-+.. |+.+ +.-..+... + ....+..-. ..-.-+.|.|+|.++++. ++
T Consensus 141 ff~p~G----~-Lyav~-dg~l--yr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g 201 (236)
T 1tl2_A 141 FFHPNG----Y-LYAVH-GQQF--YKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GG 201 (236)
T ss_dssp EECTTS----C-EEEEE-TTEE--EEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TT
T ss_pred EECCCc----e-EEEEe-CCcE--EecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CC
Confidence 999984 3 44444 7774 332222111 1 112222111 122336699999998877 55
No 332
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=50.25 E-value=1.5e+02 Score=26.98 Aligned_cols=228 Identities=9% Similarity=-0.042 Sum_probs=0.0
Q ss_pred cceEEEEEcC-CCCEEEEeeCCCcEEEEEeCCCCceeeEEEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCC
Q 036510 12 DTVHDVAMDY-YGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN 90 (288)
Q Consensus 12 ~~v~~~~~s~-~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~ 90 (288)
.....+.|++ +++.+.+=-..+.|..++.+ +.......+..-.....++++.+. .++++.+-...+.|.+.++....
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~-g~~~~~~v~~~~~~~P~GlAvD~~-~~~ly~~d~~~~~I~v~~~dG~~ 117 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFN-KTESVQNVVVSGLLSPDGLACDWL-GEKLYWTDSETNRIEVSNLDGSL 117 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CEEEECSSCSCEEEEEEETT-TTEEEEEETTTTEEEEEETTSCS
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEcc-CCCceEEEEeCCCCCcCeEEEEec-CCEEEEEeCCCCEEEEEECCCCC
Q ss_pred ceEEeEEeecCCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecCCCCeeeEEeeccCCCCeeEEEeCCCCCCCceeccc
Q 036510 91 EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSG 170 (288)
Q Consensus 91 ~~~~~~~~~~h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~~~~~~~ 170 (288)
....+.........|++.|. ...+........-+|+-...++. .........-.....|.++|+..
T Consensus 118 ---~~~l~~~~l~~P~~Iavdp~--~g~ly~tD~g~~~~I~r~~~dG~-~~~~l~~~~~~~P~Glald~~~~-------- 183 (619)
T 3s94_A 118 ---RKVLFWQELDQPRAIALDPS--SGFMYWTDWGEVPKIERAGMDGS-SRFIIINSEIYWPNGLTLDYEEQ-------- 183 (619)
T ss_dssp ---CEEEECSSCSCCCCEEEETT--TTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSSEEEEEEETTTT--------
T ss_pred ---EEEEEeCCCCCCceEEEecC--CCeEEEeccCCCCEEEEEECCCC-ceEEEEeCCCCCCcEEEEEccCC--------
Q ss_pred ccCCCceeEEeecCCcEEEEEEeCCceeeeeeeccccCCcceEEEEecCCCCCCCcEEEEEeCCCcEEEEEeecCCCccc
Q 036510 171 FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWE 250 (288)
Q Consensus 171 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~ 250 (288)
++.++-...+.|...|+... .......+....-..+++.++ ...++-...+.|...|.......
T Consensus 184 -----~LY~aD~~~~~I~~~~~dG~----~~~~~~~~~~~~P~gi~~~~~-----~ly~td~~~~~V~~~d~~tg~~~-- 247 (619)
T 3s94_A 184 -----KLYWADAKLNFIHKSNLDGT----NRQAVVKGSLPHPFALTLFED-----ILYWTDWSTHSILACNKYTGEGL-- 247 (619)
T ss_dssp -----EEEEEETTTCCEEEESSSCC----EEC---------CCCEEESSS-----EEEEECTTTCSEEEEESSSCCCC--
T ss_pred -----EEEEEeCCCCeEEEecCCCC----ccEEEEeCCCCCceEEEEeCC-----EEEEecCCCCEEEEEECCCCccc--
Q ss_pred ceEeeccccCeEEEEeecCCC
Q 036510 251 GKVLHDFKTPVYRVSWSLTGN 271 (288)
Q Consensus 251 ~~~~~~~~~~i~~~~~spdg~ 271 (288)
..+......|.--..|+|..+
T Consensus 248 ~~i~~~~~~p~~i~v~~~~~q 268 (619)
T 3s94_A 248 REIHSDIFSPMDIHAFSQQRQ 268 (619)
T ss_dssp EECCSCCCCCSEEEECCGGGS
T ss_pred EEEecCCCCCcEEEEEccccC
No 333
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=49.56 E-value=1.1e+02 Score=25.34 Aligned_cols=27 Identities=15% Similarity=0.249 Sum_probs=19.2
Q ss_pred ceeEEEeccCCCCe-EEEEEeCCCcEEEEee
Q 036510 104 SVNSIDWAPHELGL-CLACGSSDGNISVFTA 133 (288)
Q Consensus 104 ~v~~l~~~p~~~~~-~l~sg~~d~~i~i~d~ 133 (288)
....++|.|+ +. +++ +...+.|++++.
T Consensus 19 ~P~~i~~~pd--G~~l~V-~e~~G~i~~~~~ 46 (353)
T 2g8s_A 19 HPWALAFLPD--NHGMLI-TLRGGELRHWQA 46 (353)
T ss_dssp SEEEEEECST--TCCEEE-EETTTEEEEEET
T ss_pred CcEEEEEcCC--CCEEEE-EeCCceEEEEeC
Confidence 4678999998 45 444 456788888863
No 334
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=47.37 E-value=1.2e+02 Score=25.27 Aligned_cols=82 Identities=15% Similarity=0.126 Sum_probs=46.6
Q ss_pred EEeccccCeEEEEecCCCCCCEEEEeeCCCcEEEeecCCCCceEEeEEe----ecCCCceeEEEeccC--CCCeEEEEE-
Q 036510 50 KLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVF----EDHKSSVNSIDWAPH--ELGLCLACG- 122 (288)
Q Consensus 50 ~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~----~~h~~~v~~l~~~p~--~~~~~l~sg- 122 (288)
.+...-..-+.++|.++ |.+|++--..|.|++++...+.. .....+ .........|+++|+ .++.+.++-
T Consensus 26 ~va~gL~~P~~ia~~pd--G~llVter~~G~I~~v~~~~g~~-~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 26 TVATGLNSPWGLAPLPG--GDLLVSSRDEATITRVDAKTGRK-TELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEECCCSSEEEEEECTT--SCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred EeecCCCCceEEEEcCC--CcEEEEEecCCEEEEEECCCCcE-eeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 33333445689999764 78877766589999887544331 111111 122445789999996 224444432
Q ss_pred -eCCCcEEEEeec
Q 036510 123 -SSDGNISVFTAR 134 (288)
Q Consensus 123 -~~d~~i~i~d~~ 134 (288)
..++.|.-|...
T Consensus 103 ~~~~~~v~R~~~~ 115 (347)
T 3das_A 103 SASDNRIVRMLYD 115 (347)
T ss_dssp CSSSEEEEEEEBC
T ss_pred cCCCCEEEEEEeC
Confidence 234455555544
No 335
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=45.50 E-value=2e+02 Score=27.75 Aligned_cols=29 Identities=10% Similarity=0.153 Sum_probs=25.6
Q ss_pred CeEEEEeecCCCEEEEEeCCCcEEEeEcC
Q 036510 260 PVYRVSWSLTGNILAVADGNNNVTLWEEA 288 (288)
Q Consensus 260 ~i~~~~~spdg~~l~s~~~d~~v~~w~~~ 288 (288)
.+.+++..++..++.+-+.|+++|+|+++
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~ 265 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLS 265 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETT
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECC
Confidence 46788888999999999999999999853
No 336
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=40.44 E-value=97 Score=25.88 Aligned_cols=110 Identities=8% Similarity=-0.058 Sum_probs=57.0
Q ss_pred CEEEEeeCCCcEEEEEeCCCCceeeEEEecc-ccCeEEEEecC-CCCCCEEEEe-eCCCcEEEeecCCCCceEEeEEeec
Q 036510 24 KRLATASSDYSIKIIGVGNNTSQHLAKLSGH-KGAVWEVAWAH-PKFGSILASC-SFDGTVIIWKEGNSNEWIKDHVFED 100 (288)
Q Consensus 24 ~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~h-~~~v~~~~~~~-~~~~~~l~s~-s~d~~v~iwd~~~~~~~~~~~~~~~ 100 (288)
..++.++.||.+.-.|.. +++.+-++..- ..++....-.. ..++..++.. +.||.+..++..++. +......+.
T Consensus 11 ~~V~v~t~dG~l~Ald~~--tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~-~~~~~~~~~ 87 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRR--NGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGL-QKLPLSIRQ 87 (339)
T ss_dssp EEEEEEETTSCEEEEETT--TTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEE-EEEEEEHHH
T ss_pred CEEEEEeCCCeEEEEECC--CCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCc-EEeeecccc
Confidence 467788889987777753 44566555433 12222211110 0123344443 689999999876652 211111111
Q ss_pred --CCCceeEEEeccCC-------CCeEEEEEeCCCcEEEEeecCCC
Q 036510 101 --HKSSVNSIDWAPHE-------LGLCLACGSSDGNISVFTARADG 137 (288)
Q Consensus 101 --h~~~v~~l~~~p~~-------~~~~l~sg~~d~~i~i~d~~~~~ 137 (288)
...++.. .=.|-- .+..+.+|+.++++...|++++.
T Consensus 88 lv~~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 88 LVSTSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp HHTTCSEEE-ECC----------CCEEEEECEEEEEEEEEETTTCC
T ss_pred ceecccccc-CCCceeecccccccCCEEEEEecCCEEEEEECCCCc
Confidence 1111211 100100 13457788999999999988765
No 337
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=35.87 E-value=2.2e+02 Score=24.80 Aligned_cols=62 Identities=16% Similarity=0.203 Sum_probs=35.3
Q ss_pred EEEEEcCCCC-EEEEeeCCCcEEEEEeCCCC-ceeeEEEe---------ccccCeEEEEecCC--CCCCEEEEee
Q 036510 15 HDVAMDYYGK-RLATASSDYSIKIIGVGNNT-SQHLAKLS---------GHKGAVWEVAWAHP--KFGSILASCS 76 (288)
Q Consensus 15 ~~~~~s~~g~-~l~s~~~d~~i~lwd~~~~~-~~~~~~~~---------~h~~~v~~~~~~~~--~~~~~l~s~s 76 (288)
..++|.|+|+ +|+.+...+.|++++.+... ...+..+. +....+..|++.++ .++.+.++-+
T Consensus 17 ~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 17 VGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp EEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred eEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence 4788999985 45556778989888643221 11122211 11456788998653 1345555544
No 338
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=33.18 E-value=73 Score=30.85 Aligned_cols=37 Identities=19% Similarity=0.272 Sum_probs=28.0
Q ss_pred ceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEE
Q 036510 13 TVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKL 51 (288)
Q Consensus 13 ~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~ 51 (288)
.+.++...++..++++-+.|+++|+|++.. ++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t--~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLST--NQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTT--TEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCC--CCeEeee
Confidence 455666667788999999999999999854 3555543
No 339
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=31.22 E-value=3.3e+02 Score=25.49 Aligned_cols=148 Identities=9% Similarity=0.055 Sum_probs=70.8
Q ss_pred ccceEEEEEcCC-CCEEEEeeCCCcEEEEEeCCCCceeeEEEec----cccCeEEEEecCCCCCCEEEEeeCCC---cEE
Q 036510 11 EDTVHDVAMDYY-GKRLATASSDYSIKIIGVGNNTSQHLAKLSG----HKGAVWEVAWAHPKFGSILASCSFDG---TVI 82 (288)
Q Consensus 11 ~~~v~~~~~s~~-g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~~l~s~s~d~---~v~ 82 (288)
...|.+|.++|. ...+..+...+.|...+=.+.+.+.+....+ ....+.+|++.+...+.+++..+... ...
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 468999999985 3456666666655443322222322211000 13468999987532233444333211 034
Q ss_pred EeecCC-CCceEEeEE-eec-----CCCceeEEEeccCCCCeEEEEEeCCCcEEEEeecC-CCCeeeEEeec---cCCCC
Q 036510 83 IWKEGN-SNEWIKDHV-FED-----HKSSVNSIDWAPHELGLCLACGSSDGNISVFTARA-DGGWDTSRIDQ---AHPVG 151 (288)
Q Consensus 83 iwd~~~-~~~~~~~~~-~~~-----h~~~v~~l~~~p~~~~~~l~sg~~d~~i~i~d~~~-~~~~~~~~~~~---~~~~~ 151 (288)
||...+ +.+|..... +.. .+..+..++++|.+.+ .+..+...+. ||-... +..|....... .....
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~-~v~~g~~~~g--l~~S~DgG~TW~~~~~~~~~~~~~~~ 170 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSN-EVWMGTRTEG--IWKSSDRAKTWTNVTSIPDAFTNGIG 170 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEE-EEEEECSSSC--EEEESSTTSSCEEETTSCCCCSTTTC
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCC-EEEEEeccCC--EEEECCCCcccCCCccCccccCCCCC
Confidence 554444 455644321 000 0113567888886533 4444553443 344433 34565432111 01135
Q ss_pred eeEEEeCCCC
Q 036510 152 VTSVSWAPST 161 (288)
Q Consensus 152 v~~i~~~p~~ 161 (288)
+..+.+.|..
T Consensus 171 ~~~i~~~p~~ 180 (789)
T 1sqj_A 171 YTSVIFDPER 180 (789)
T ss_dssp EEEEEECTTS
T ss_pred eEEEEECCCC
Confidence 7778887765
No 340
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=26.35 E-value=2.4e+02 Score=23.46 Aligned_cols=117 Identities=17% Similarity=0.131 Sum_probs=55.8
Q ss_pred CCEEEEeeCCCcEEEeecCCCCceEEeEEeecC-CCceeEEEeccC-CCCeEEEEE-eCCCcEEEEeecCCCCeeeEEee
Q 036510 69 GSILASCSFDGTVIIWKEGNSNEWIKDHVFEDH-KSSVNSIDWAPH-ELGLCLACG-SSDGNISVFTARADGGWDTSRID 145 (288)
Q Consensus 69 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~h-~~~v~~l~~~p~-~~~~~l~sg-~~d~~i~i~d~~~~~~~~~~~~~ 145 (288)
+.+++.++.||.+.-.|..+++ ....+... ..++....-... ..+..++.. ..||.|..++..++ .......
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~---~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G--~~~~~~~ 84 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGH---IIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG--LQKLPLS 84 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTE---EEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE--EEEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCc---EEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC--cEEeeec
Confidence 3577888999999999987765 23333221 112222110000 012333333 57999988887654 1112111
Q ss_pred cc---CCCCeeEEEeCCCCCCCceecccccCCCceeEEeecCCcEEEEEEeCCc
Q 036510 146 QA---HPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGI 196 (288)
Q Consensus 146 ~~---~~~~v~~i~~~p~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 196 (288)
.. ...++.. .=.|-- ...+.......+++|+.++.+.-.|+.+|.
T Consensus 85 ~~~lv~~SP~~~-~~~pvv-----~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 85 IRQLVSTSPLHL-KTNIVV-----NDSGKIVEDEKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp HHHHHTTCSEEE-ECC---------------CCEEEEECEEEEEEEEEETTTCC
T ss_pred cccceecccccc-CCCcee-----ecccccccCCEEEEEecCCEEEEEECCCCc
Confidence 10 1111110 000000 000000123567888999999888888773
No 341
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=24.99 E-value=2.1e+02 Score=26.76 Aligned_cols=37 Identities=8% Similarity=0.099 Sum_probs=26.4
Q ss_pred cceEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEEe
Q 036510 12 DTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLS 52 (288)
Q Consensus 12 ~~v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~~ 52 (288)
..|.++.+ +.++|++-+.|+++|+|++.. ++++.+..
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t--~~lv~t~D 258 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTS--FTLIQDYD 258 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTT--TEEEEEEE
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCC--CceEEeec
Confidence 34555544 367999999999999999954 35554443
No 342
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=22.86 E-value=78 Score=31.31 Aligned_cols=36 Identities=17% Similarity=0.256 Sum_probs=26.5
Q ss_pred eEEEEEcCCCCEEEEeeCCCcEEEEEeCCCCceeeEEE
Q 036510 14 VHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKL 51 (288)
Q Consensus 14 v~~~~~s~~g~~l~s~~~d~~i~lwd~~~~~~~~~~~~ 51 (288)
+.++...++.++|++-+.|+++|+|++.. +.++.+.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t--~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLST--NQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTT--TEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCC--CCeEEee
Confidence 33445556778999999999999999853 4555553
No 343
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=21.14 E-value=4.2e+02 Score=23.98 Aligned_cols=57 Identities=12% Similarity=0.120 Sum_probs=31.7
Q ss_pred EEEEEcCCCCEEEEeeCC----------CcEEEEEeCCCCceeeEEEecc-ccCeEEEEecCCCCCCEEE
Q 036510 15 HDVAMDYYGKRLATASSD----------YSIKIIGVGNNTSQHLAKLSGH-KGAVWEVAWAHPKFGSILA 73 (288)
Q Consensus 15 ~~~~~s~~g~~l~s~~~d----------~~i~lwd~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~l~ 73 (288)
--|.|++.|++++.-..+ +.-.+|-....+++..+-+.++ ...++.++|+++ ++.|.
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspD--g~tlf 546 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPD--QKTLF 546 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTT--SSEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCC--CCEEE
Confidence 447899999987765433 1223443322233333334443 356888999864 44443
No 344
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=20.11 E-value=57 Score=32.30 Aligned_cols=29 Identities=10% Similarity=0.153 Sum_probs=24.3
Q ss_pred CeEEEEeecCCCEEEEEeCCCcEEEeEcC
Q 036510 260 PVYRVSWSLTGNILAVADGNNNVTLWEEA 288 (288)
Q Consensus 260 ~i~~~~~spdg~~l~s~~~d~~v~~w~~~ 288 (288)
.+.+++..++.+++.+-+.|+++|+|+++
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~ 267 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLS 267 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETT
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECC
Confidence 45566778899999999999999999953
Done!