Query 036513
Match_columns 69
No_of_seqs 49 out of 51
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 03:55:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036513.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036513hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ud0a_ a.8.4.1 (A:) DnaK {Rat 68.6 0.6 4.3E-05 26.4 0.4 13 1-13 6-18 (84)
2 d1v7pb_ d.169.1.1 (B:) Snake c 47.8 5.7 0.00041 21.8 2.2 21 10-31 52-72 (127)
3 d1c3ab_ d.169.1.1 (B:) Snake c 39.8 7.1 0.00052 21.4 1.8 22 11-33 56-77 (125)
4 d1fvub_ d.169.1.1 (B:) Snake c 31.8 9.8 0.00072 20.6 1.5 25 9-34 52-76 (125)
5 d1tkea2 d.67.1.1 (A:63-224) Th 26.5 6.2 0.00045 23.6 -0.1 17 16-32 138-154 (162)
6 d1nija2 d.237.1.1 (A:224-318) 25.2 3 0.00022 23.4 -1.7 17 5-21 32-48 (95)
7 d1jwib_ d.169.1.1 (B:) Snake c 23.7 23 0.0017 19.1 2.1 17 8-24 51-67 (123)
8 d1v7pa_ d.169.1.1 (A:) Snake c 22.2 22 0.0016 19.3 1.8 11 18-29 65-75 (134)
9 d1umrc_ d.169.1.1 (C:) Snake c 17.9 35 0.0025 18.3 2.0 16 10-25 55-70 (125)
10 d1jzna_ d.169.1.1 (A:) Galacto 14.8 53 0.0039 17.6 2.3 17 8-24 53-69 (135)
No 1
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=68.57 E-value=0.6 Score=26.36 Aligned_cols=13 Identities=31% Similarity=0.654 Sum_probs=11.7
Q ss_pred CchhhhhhHHHHh
Q 036513 1 MERFLFRVKALLH 13 (69)
Q Consensus 1 LE~fvfrVKalL~ 13 (69)
||.+||+||..|.
T Consensus 6 LEsyiy~~r~~l~ 18 (84)
T d1ud0a_ 6 LESYAFNMKATVE 18 (84)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 7899999999985
No 2
>d1v7pb_ d.169.1.1 (B:) Snake coagglutinin beta chain {Snake (Echis multisquamatus), Ems16 [TaxId: 93050]}
Probab=47.76 E-value=5.7 Score=21.84 Aligned_cols=21 Identities=19% Similarity=0.298 Sum_probs=12.1
Q ss_pred HHHhhCCCcceeeecccccCCC
Q 036513 10 ALLHTKSSGCTFWMGNLKHKDL 31 (69)
Q Consensus 10 alL~~n~c~~AFwmGNLKnkDL 31 (69)
.++....-...|||| |+.+..
T Consensus 52 ~~~~~~~~~~~~WiG-l~~~~~ 72 (127)
T d1v7pb_ 52 KLASKALKFTSMWIG-LNNPWK 72 (127)
T ss_dssp HHHHHHCSSCEEEEE-EECTTT
T ss_pred eeecccccceeEEee-eeccCc
Confidence 344444456689999 444433
No 3
>d1c3ab_ d.169.1.1 (B:) Snake coagglutinin beta chain {Habu snake (Trimeresurus flavoviridis), flavocetin-A [TaxId: 88087]}
Probab=39.79 E-value=7.1 Score=21.43 Aligned_cols=22 Identities=14% Similarity=-0.029 Sum_probs=12.1
Q ss_pred HHhhCCCcceeeecccccCCCCC
Q 036513 11 LLHTKSSGCTFWMGNLKHKDLMG 33 (69)
Q Consensus 11 lL~~n~c~~AFwmGNLKnkDL~G 33 (69)
++....-...|||| |..+.-.|
T Consensus 56 ~~~~~~~~~~~WiG-l~~~~~~~ 77 (125)
T d1c3ab_ 56 KTFPILKYDFVWIG-LSNVWNEC 77 (125)
T ss_dssp HHHHHHCSCEEECS-CCCTTTSS
T ss_pred hhhccCCceeEEEE-ecccCcce
Confidence 34333446779999 44443333
No 4
>d1fvub_ d.169.1.1 (B:) Snake coagglutinin beta chain {Jararaca (Bothrops jararaca), botrocetin [TaxId: 8724]}
Probab=31.85 E-value=9.8 Score=20.65 Aligned_cols=25 Identities=20% Similarity=0.299 Sum_probs=13.0
Q ss_pred HHHHhhCCCcceeeecccccCCCCCc
Q 036513 9 KALLHTKSSGCTFWMGNLKHKDLMGQ 34 (69)
Q Consensus 9 KalL~~n~c~~AFwmGNLKnkDL~G~ 34 (69)
+.++....-...|||| |....-.|.
T Consensus 52 ~~~~~~~~~~~~~WiG-l~~~~~~~~ 76 (125)
T d1fvub_ 52 RSLTSEMLKGDVVWIG-LSDVWNKCR 76 (125)
T ss_dssp HTTCTTSCTTCCEECS-CCCCSTTSC
T ss_pred cccccccccceeEEee-eeccCcccc
Confidence 3344444445679999 433333333
No 5
>d1tkea2 d.67.1.1 (A:63-224) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Escherichia coli [TaxId: 562]}
Probab=26.54 E-value=6.2 Score=23.57 Aligned_cols=17 Identities=24% Similarity=0.593 Sum_probs=13.3
Q ss_pred CCcceeeecccccCCCC
Q 036513 16 SSGCTFWMGNLKHKDLM 32 (69)
Q Consensus 16 ~c~~AFwmGNLKnkDL~ 32 (69)
+.+.|||-|+=+|+=|+
T Consensus 138 ~vsgaYw~gd~~n~~Lq 154 (162)
T d1tkea2 138 KTAGAYWRGDSNNKMLQ 154 (162)
T ss_dssp EEEEEEGGGCTTSCEEE
T ss_pred EechhhcCCCCCCcccE
Confidence 34689999999987664
No 6
>d1nija2 d.237.1.1 (A:224-318) Hypothetical protein YjiA, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.19 E-value=3 Score=23.36 Aligned_cols=17 Identities=24% Similarity=0.358 Sum_probs=12.7
Q ss_pred hhhhHHHHhhCCCccee
Q 036513 5 LFRVKALLHTKSSGCTF 21 (69)
Q Consensus 5 vfrVKalL~~n~c~~AF 21 (69)
|||+|+++..-+....|
T Consensus 32 ilR~KG~v~~~~~~~~~ 48 (95)
T d1nija2 32 LLRYKGMLWIDGEPNRL 48 (95)
T ss_dssp EEEEEEEECBTTCSEEE
T ss_pred EEEEEEEEEeccCCcce
Confidence 89999998876664443
No 7
>d1jwib_ d.169.1.1 (B:) Snake coagglutinin beta chain {Puff adder (Bitis arietans), bitiscetin [TaxId: 8692]}
Probab=23.66 E-value=23 Score=19.07 Aligned_cols=17 Identities=24% Similarity=0.448 Sum_probs=11.7
Q ss_pred hHHHHhhCCCcceeeec
Q 036513 8 VKALLHTKSSGCTFWMG 24 (69)
Q Consensus 8 VKalL~~n~c~~AFwmG 24 (69)
|..++..+.-...||||
T Consensus 51 l~~~~~~~~~~~~~WiG 67 (123)
T d1jwib_ 51 ISKLALEKMRIVLVWIG 67 (123)
T ss_dssp HHHHHHHTTCCCEEEEE
T ss_pred hhhheeccccccceEee
Confidence 34456666666789999
No 8
>d1v7pa_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Snake (Echis multisquamatus), Ems16 [TaxId: 93050]}
Probab=22.23 E-value=22 Score=19.26 Aligned_cols=11 Identities=27% Similarity=0.891 Sum_probs=7.2
Q ss_pred cceeeecccccC
Q 036513 18 GCTFWMGNLKHK 29 (69)
Q Consensus 18 ~~AFwmGNLKnk 29 (69)
...|||| |+.+
T Consensus 65 ~~~~WIG-l~~~ 75 (134)
T d1v7pa_ 65 EIYVWIG-LRDR 75 (134)
T ss_dssp CSEEEEE-EECC
T ss_pred cchhhhh-cccc
Confidence 4569999 4433
No 9
>d1umrc_ d.169.1.1 (C:) Snake coagglutinin beta chain {South american rattlesnake (Crotalus durissus terrificus), convulxin [TaxId: 8732]}
Probab=17.87 E-value=35 Score=18.33 Aligned_cols=16 Identities=25% Similarity=0.686 Sum_probs=10.1
Q ss_pred HHHhhCCCcceeeecc
Q 036513 10 ALLHTKSSGCTFWMGN 25 (69)
Q Consensus 10 alL~~n~c~~AFwmGN 25 (69)
.++....-...||||-
T Consensus 55 ~~~~~~~~~~~~WIGl 70 (125)
T d1umrc_ 55 KMTHQSLKSTFFWIGA 70 (125)
T ss_dssp HHHHTTCSSSEEECSC
T ss_pred hhhcccccceeEEEee
Confidence 3444444567799993
No 10
>d1jzna_ d.169.1.1 (A:) Galactose-specific C-type lectin {Western diamondback rattlesnake (Crotalus atrox) [TaxId: 8730]}
Probab=14.81 E-value=53 Score=17.56 Aligned_cols=17 Identities=12% Similarity=0.380 Sum_probs=10.4
Q ss_pred hHHHHhhCCCcceeeec
Q 036513 8 VKALLHTKSSGCTFWMG 24 (69)
Q Consensus 8 VKalL~~n~c~~AFwmG 24 (69)
++.|-....-...||||
T Consensus 53 ~~~l~~~~~~~~~~WiG 69 (135)
T d1jzna_ 53 AEYISDYHKGQENVWIG 69 (135)
T ss_dssp HHHHHHHCCSSCCEEEE
T ss_pred HHhhhhccCCCccEEEE
Confidence 33333344556789999
Done!