Your job contains 1 sequence.
>036518
MAEALLFHNLRKASALNKFLSLRLKRYEVPKVQGPVVKPHELTGEERFYFKKMAQKRSNY
VPIGRRGVFGGVILNMHMHWKKHETVKVFCKPSKPGQIHEFAEEIARLSGGIPIQIIGDD
TVIFYRGKNYVQPEIMSPIDTLSKKKALEKSKYEQSLESVRRFIAMAEKELELYYRHIAL
YGDPNNRNPMSIMDNPSKVTKESWKFKMVERKSLDSTYDALSP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036518
(223 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2056558 - symbol:AT2G28480 species:3702 "Arabi... 804 4.7e-80 1
TAIR|locus:2123276 - symbol:AT4G13070 species:3702 "Arabi... 543 2.1e-52 1
TAIR|locus:2094438 - symbol:LOH1 "LAG One Homologue 1" sp... 419 2.9e-39 1
TAIR|locus:2091458 - symbol:AT3G27550 species:3702 "Arabi... 398 4.9e-37 1
TAIR|locus:2096662 - symbol:CFM2 "CRM family member 2" sp... 242 2.1e-20 2
TAIR|locus:2094997 - symbol:EMB1865 "embryo defective 186... 244 1.6e-19 1
TAIR|locus:2094558 - symbol:CFM3A "CRM family member 3A" ... 225 1.8e-17 1
TAIR|locus:2181372 - symbol:CRS1 "ortholog of maize chlor... 187 1.6e-13 1
>TAIR|locus:2056558 [details] [associations]
symbol:AT2G28480 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR001890 Pfam:PF01985 PROSITE:PS51295
SMART:SM01103 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003723
EMBL:AC006587 Gene3D:3.30.110.60 SUPFAM:SSF75471
HOGENOM:HOG000241798 EMBL:BT011753 EMBL:AK226713 IPI:IPI00526248
PIR:D84685 RefSeq:NP_180415.1 UniGene:At.50106
ProteinModelPortal:Q9SK10 SMR:Q9SK10 EnsemblPlants:AT2G28480.1
GeneID:817396 KEGG:ath:AT2G28480 TAIR:At2g28480 eggNOG:NOG245924
InParanoid:Q9SK10 OMA:ANRKDPR PhylomeDB:Q9SK10
ProtClustDB:CLSN2913133 Genevestigator:Q9SK10 Uniprot:Q9SK10
Length = 372
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 149/198 (75%), Positives = 171/198 (86%)
Query: 2 AEALLFHNLRKASALNKFLSLRLKRYEVPKVQGPVVKPHELTGEERFYFKKMAQKRSNYV 61
AE + + L KA L RLKRYEV KVQGP V+PHE+TGEERFY KKM QKRSNYV
Sbjct: 124 AEERIKYKLEKAKIKEALLIERLKRYEVAKVQGPEVRPHEITGEERFYLKKMGQKRSNYV 183
Query: 62 PIGRRGVFGGVILNMHMHWKKHETVKVFCKPSKPGQIHEFAEEIARLSGGIPIQIIGDDT 121
PIGRRGVFGGVILNMH+HWKKHETVKV C SKPGQ+ ++AEE+A+LSGG+P+ IIGDDT
Sbjct: 184 PIGRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGGVPVNIIGDDT 243
Query: 122 VIFYRGKNYVQPEIMSPIDTLSKKKALEKSKYEQSLESVRRFIAMAEKELELYYRHIALY 181
+IFYRGK YVQP++MSPIDTLSKK+A EKSKYEQSLESVR FIA+AEKELELYYRH+ALY
Sbjct: 244 IIFYRGKGYVQPQVMSPIDTLSKKRAYEKSKYEQSLESVRHFIAIAEKELELYYRHVALY 303
Query: 182 GDPNNRNPMSIMDN-PSK 198
DPNNRNP+SI+D+ PS+
Sbjct: 304 DDPNNRNPLSILDDSPSE 321
>TAIR|locus:2123276 [details] [associations]
symbol:AT4G13070 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR001890 Pfam:PF01985 PROSITE:PS51295
SMART:SM01103 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003723
Gene3D:3.30.110.60 SUPFAM:SSF75471 EMBL:BT022043 EMBL:BT029203
EMBL:AK175251 EMBL:AK176471 EMBL:AK176848 IPI:IPI00516587
RefSeq:NP_193043.2 UniGene:At.43316 ProteinModelPortal:Q67YJ7
SMR:Q67YJ7 EnsemblPlants:AT4G13070.1 GeneID:826921
KEGG:ath:AT4G13070 TAIR:At4g13070 eggNOG:NOG314366
HOGENOM:HOG000241798 InParanoid:Q67YJ7 OMA:NELRFYR PhylomeDB:Q67YJ7
ProtClustDB:CLSN2918582 Genevestigator:Q67YJ7 Uniprot:Q67YJ7
Length = 343
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 100/178 (56%), Positives = 133/178 (74%)
Query: 3 EALLFHNLRKASALNKFLSLRLKRYEVPKVQGPVVKPHELTGEERFYFKKMAQKRSNYVP 62
E + + L KA ++L +L++Y+VPK P LT EE+ Y K+ +KR N+V
Sbjct: 143 EVRIRYKLEKAKRKEEWLIEKLRKYDVPKSPAEPYDPESLTEEEQHYLKRTGEKRKNFVL 202
Query: 63 IGRRGVFGGVILNMHMHWKKHETVKVFCKP-SKPGQIHEFAEEIARLSGGIPIQIIGDDT 121
+GRRGVFGGV+LN+H+HWKKHETVKV CKP +KPGQ+HE+AEE+ARLS GI I + ++T
Sbjct: 203 VGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARLSKGIVIDVKPNNT 262
Query: 122 VIFYRGKNYVQPEIMSPIDTLSKKKALEKSKYEQSLESVRRFIAMAEKELELYYRHIA 179
++ YRGKNYV+PE+MSP+DTLSK KALEK +YEQSLE FI EKELE Y++++A
Sbjct: 263 IVLYRGKNYVRPEVMSPVDTLSKDKALEKYRYEQSLEHTSEFIEKLEKELEEYHKYVA 320
>TAIR|locus:2094438 [details] [associations]
symbol:LOH1 "LAG One Homologue 1" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0042761 "very
long-chain fatty acid biosynthetic process" evidence=IGI]
[GO:0050291 "sphingosine N-acyltransferase activity" evidence=IGI]
InterPro:IPR001890 Pfam:PF01985 PROSITE:PS51295 SMART:SM01103
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
EMBL:AB025639 GO:GO:0042761 Gene3D:3.30.110.60 SUPFAM:SSF75471
GO:GO:0050291 KO:K01148 EMBL:AK176804 IPI:IPI00542084
RefSeq:NP_189171.2 UniGene:At.37388 ProteinModelPortal:Q67XL4
SMR:Q67XL4 PaxDb:Q67XL4 PRIDE:Q67XL4 EnsemblPlants:AT3G25440.1
GeneID:822128 KEGG:ath:AT3G25440 TAIR:At3g25440 eggNOG:NOG254408
HOGENOM:HOG000240887 InParanoid:Q67XL4 OMA:RRYIPRL PhylomeDB:Q67XL4
ProtClustDB:CLSN2681576 Genevestigator:Q67XL4 Uniprot:Q67XL4
Length = 444
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 93/212 (43%), Positives = 129/212 (60%)
Query: 2 AEALLFHNLRKASALNKFLSLRLKRYEVPKVQGPVVKPHELTGEERFYFKKMAQKRSNYV 61
+E + + LRKA + L +K+ E + P LT EE FY+ KM K NYV
Sbjct: 137 SEEKILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYV 196
Query: 62 PIGRRGVFGGVILNMHMHWKKHETVKVFCKPSKPGQIHEFAEEIARLSGGIPIQIIGDDT 121
P+GRRG++ GVILNMH+HWKKH+T++V K P ++ E A E+ARL+GGI + + +T
Sbjct: 197 PVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNT 256
Query: 122 VIFYRGKNYVQP--EIMSPIDTLSKKKALEKSKYEQSLESVRRFIAMAEKELELYYRHIA 179
+I YRGKNYVQP EIMSP TL +KKAL+KSK +L +VR++I E+EL+L
Sbjct: 257 IIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQAE 316
Query: 180 LYGDPNNRNPMSIMDNPSKVTKESWKFKMVER 211
D N + + DN + E K K++ER
Sbjct: 317 TKRDYTN---VKVDDNQER--SEELK-KIIER 342
>TAIR|locus:2091458 [details] [associations]
symbol:AT3G27550 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR001890 Pfam:PF01985 PROSITE:PS51295
SMART:SM01103 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
Gene3D:3.30.110.60 SUPFAM:SSF75471 EMBL:AB025626 IPI:IPI00525575
RefSeq:NP_189392.1 UniGene:At.37034 ProteinModelPortal:Q9LT57
SMR:Q9LT57 EnsemblPlants:AT3G27550.1 GeneID:822377
KEGG:ath:AT3G27550 TAIR:At3g27550 eggNOG:NOG248894
HOGENOM:HOG000241218 InParanoid:Q9LT57 OMA:RMRKESG PhylomeDB:Q9LT57
ProtClustDB:CLSN2685015 Genevestigator:Q9LT57 Uniprot:Q9LT57
Length = 491
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 80/169 (47%), Positives = 112/169 (66%)
Query: 3 EALLFHNLRKASALNKFLSLRLKRYEVPKVQGPVVKPHELTGEERFYFKKMAQKRSNYVP 62
E L +NL++A L +LK+Y++P++ PV P T E+ FKK+ K NYVP
Sbjct: 53 EERLIYNLKRAKKKVALLLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVP 112
Query: 63 IGRRGVFGGVILNMHMHWKKHETVKVFCKPSKPGQIHEFAEEIARLSGGIPIQIIGDDTV 122
+G RGVFGGV+ NMHMHWK HETV+V C +I E A IARLSGG+ I I T+
Sbjct: 113 VGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTI 172
Query: 123 IFYRGKNYVQPEIMSPIDTLSKKKALEKSKYEQSLESVRRFIAMAEKEL 171
I +RG+NY QP+ + P++TL+K+KAL K+++EQ+LES + I E++L
Sbjct: 173 IMFRGRNYRQPKNLIPVNTLTKRKALFKARFEQALESQKLNIKKTEQQL 221
>TAIR|locus:2096662 [details] [associations]
symbol:CFM2 "CRM family member 2" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;RCA] [GO:0000372 "Group I
intron splicing" evidence=IMP] [GO:0000373 "Group II intron
splicing" evidence=IMP] InterPro:IPR001890 Pfam:PF01985
PROSITE:PS51295 SMART:SM01103 EMBL:CP002686 GO:GO:0003723
Gene3D:3.30.110.60 SUPFAM:SSF75471 GO:GO:0000373 GO:GO:0000372
EMBL:AY136347 EMBL:BT010594 IPI:IPI00518423 RefSeq:NP_186786.2
UniGene:At.28082 ProteinModelPortal:Q8L7C2 SMR:Q8L7C2 IntAct:Q8L7C2
STRING:Q8L7C2 PaxDb:Q8L7C2 PRIDE:Q8L7C2 EnsemblPlants:AT3G01370.1
GeneID:821288 KEGG:ath:AT3G01370 TAIR:At3g01370 eggNOG:NOG300241
InParanoid:Q8L7C2 OMA:ASMIKLW PhylomeDB:Q8L7C2
ProtClustDB:CLSN2690653 ArrayExpress:Q8L7C2 Genevestigator:Q8L7C2
Uniprot:Q8L7C2
Length = 1011
Score = 242 (90.2 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 56/171 (32%), Positives = 94/171 (54%)
Query: 11 RKASALNKFLSLRLKRYEVPKVQGPVVKPHELTGEERFYFKKMAQKRSNYVPIGRRGVFG 70
+KA+A K L+ L+ E P++ + +T +E++ +K+ K ++ +GRRGVF
Sbjct: 552 KKANA-EKVLA-DLENRESPQLSD--IDKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFD 607
Query: 71 GVILNMHMHWKKHETVKVFCKPSKPGQIHEFAEEIARLSGGI--PIQIIGDD-TVIFYRG 127
G I NMH+HWK E VK+ C H+ AE + SGGI ++++ +I YRG
Sbjct: 608 GTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRG 667
Query: 128 KNYVQPEIMSPIDTLSKKKALEKSKYEQSLESVRRFIAMAEKELELYYRHI 178
KNY +P+ + P LSK++AL++S Q +S++ + +E R +
Sbjct: 668 KNYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQL 718
Score = 129 (50.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 40/162 (24%), Positives = 74/162 (45%)
Query: 7 FHNLRKASALNKFLSLRLKRYEVPKVQGPVVKPHELTGEERFYFKKMAQKRSNYVPIGRR 66
+H L++ + R K +VP + + P EL R + + + + + IG+
Sbjct: 137 YHELKRVWKKETEME-RKKEEKVPSLAELTLPPAEL---RRL--RTVGIRLTKKLKIGKA 190
Query: 67 GVFGGVILNMHMHWKKHETVKVFCKPSKPGQIHEFAEEIARLSGGIPIQIIGDDTVIFYR 126
G+ G++ +H W+ E VK+FC+ + + + +GG+ I G ++ YR
Sbjct: 191 GITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLETKTGGLVIWRSGSK-ILLYR 249
Query: 127 GKNYVQPEIMSPIDTLSKKKALEKSKYEQSLESVRRFIAMAE 168
G NY P +S D L+ + A S +Q + R ++AE
Sbjct: 250 GVNYQYPYFVSDRD-LAHEAASGASSMDQGVVDSREKQSIAE 290
Score = 38 (18.4 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 167 AEKELELYYRHIALYGDPNNRNPMSIMDNPSKVT 200
AE+E++ +Y + + N + S +D+P V+
Sbjct: 965 AEEEMKSFYPNNNVKSSINLPSTRSFVDDPPHVS 998
>TAIR|locus:2094997 [details] [associations]
symbol:EMB1865 "embryo defective 1865" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0009737
"response to abscisic acid stimulus" evidence=IDA] [GO:0006655
"phosphatidylglycerol biosynthetic process" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0016117
"carotenoid biosynthetic process" evidence=RCA] [GO:0019288
"isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] InterPro:IPR001890 Pfam:PF01985
PROSITE:PS51295 SMART:SM01103 GO:GO:0009737 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723 EMBL:AB026658
Gene3D:3.30.110.60 SUPFAM:SSF75471 HOGENOM:HOG000241574
EMBL:AY063908 IPI:IPI00520842 RefSeq:NP_188468.1 UniGene:At.20890
ProteinModelPortal:Q9LS51 SMR:Q9LS51 STRING:Q9LS51 PaxDb:Q9LS51
PRIDE:Q9LS51 EnsemblPlants:AT3G18390.1 GeneID:821368
KEGG:ath:AT3G18390 TAIR:At3g18390 eggNOG:NOG326934
InParanoid:Q9LS51 OMA:DMKTAHE PhylomeDB:Q9LS51
ProtClustDB:CLSN2684381 ArrayExpress:Q9LS51 Genevestigator:Q9LS51
Uniprot:Q9LS51
Length = 848
Score = 244 (91.0 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 60/169 (35%), Positives = 90/169 (53%)
Query: 8 HNLRKASALNKFLSLRLKRYEVPKV-QGPVVKPHELTGEERFYFKKMAQKRSNYVPIGRR 66
H L A + + L + E + GP ++ EER F+K+ K Y+PIG R
Sbjct: 618 HKLNLAQSKFQRAEKLLSKIEASMIPNGPDYDQEVISEEERAMFRKVGLKMKAYLPIGIR 677
Query: 67 GVFGGVILNMHMHWKKHETVKVFCKPSKPGQIHEFAEEIARLSGGIPIQI--IGDD-TVI 123
GVF GVI NMH+HWK E VK+ K + E A + SGG+ + I + +I
Sbjct: 678 GVFDGVIENMHLHWKHRELVKLISKQKNQAFVEETARLLEYESGGVLVAIEKVPKGFALI 737
Query: 124 FYRGKNYVQPEIMSPIDTLSKKKALEKSKYEQSLESVRRFIAMAEKELE 172
+YRGKNY +P + P + L+K KAL++S Q E++ + I+ E+ +E
Sbjct: 738 YYRGKNYRRPISLRPRNLLTKAKALKRSIAMQRHEALSQHISELERTIE 786
>TAIR|locus:2094558 [details] [associations]
symbol:CFM3A "CRM family member 3A" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0000373 "Group II
intron splicing" evidence=IMP] [GO:0048316 "seed development"
evidence=IGI] InterPro:IPR001890 Pfam:PF01985 PROSITE:PS51295
SMART:SM01103 GO:GO:0009507 EMBL:CP002686 GO:GO:0003723
GO:GO:0048316 Gene3D:3.30.110.60 SUPFAM:SSF75471 GO:GO:0000373
IPI:IPI00537962 RefSeq:NP_188947.2 UniGene:At.6125 UniGene:At.71222
ProteinModelPortal:F4J2U9 SMR:F4J2U9 PRIDE:F4J2U9
EnsemblPlants:AT3G23070.1 GeneID:821881 KEGG:ath:AT3G23070
OMA:VEILRHE Uniprot:F4J2U9
Length = 881
Score = 225 (84.3 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 51/139 (36%), Positives = 78/139 (56%)
Query: 39 PHELTGEERFYFKKMAQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPSKPGQI 98
P +T EERF F+K+ K ++ +GRRGVF G + NMH+HWK E VK+ K +
Sbjct: 635 PESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGV 694
Query: 99 HEFAEEIARLSGGIPIQI---IGDDTVIFYRGKNYVQPEIMSPIDTLSKKKALEKSKYEQ 155
+ A + SGGI + I +I YRG++Y +P ++ P + L+K+KAL +S Q
Sbjct: 695 KKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKRKALARSIELQ 754
Query: 156 SLESVRRFIA-MAEKELEL 173
E + + I+ M K +L
Sbjct: 755 RREGLLKHISTMQAKAKQL 773
>TAIR|locus:2181372 [details] [associations]
symbol:CRS1 "ortholog of maize chloroplast splicing
factor CRS1" species:3702 "Arabidopsis thaliana" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0000373 "Group II intron splicing" evidence=IDA]
InterPro:IPR001890 Pfam:PF01985 PROSITE:PS51295 SMART:SM01103
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 GO:GO:0030529 Gene3D:3.30.110.60
SUPFAM:SSF75471 GO:GO:0000373 EMBL:AL391148 IPI:IPI00521200
PIR:T51488 RefSeq:NP_197122.2 UniGene:At.50459 UniGene:At.54863
ProteinModelPortal:Q9LF10 SMR:Q9LF10 PaxDb:Q9LF10 PRIDE:Q9LF10
GeneID:831476 KEGG:ath:AT5G16180 TAIR:At5g16180 eggNOG:NOG322716
HOGENOM:HOG000241574 InParanoid:Q9LF10 OMA:KIERSNQ
ArrayExpress:Q9LF10 Genevestigator:Q9LF10 Uniprot:Q9LF10
Length = 720
Score = 187 (70.9 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 46/136 (33%), Positives = 77/136 (56%)
Query: 42 LTGEERFYFKKMAQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPSKPGQIHEF 101
LT EER +++ K ++ + +GRRGVF GV+ +H HWK E KV ++
Sbjct: 572 LTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKVITMQKLFSRVVYT 631
Query: 102 AEEIARLSGGIPIQI--IGDD-TVIFYRGKNYVQP--EIMSPIDTLSKKKALEKSKYEQS 156
A+ + S G+ I I + + ++ YRGKNY +P ++M+ + L+K+KAL++S Q
Sbjct: 632 AKALETESNGVLISIEKLKEGHAILIYRGKNYKRPSSKLMAQ-NLLTKRKALQRSVVMQR 690
Query: 157 LESVRRFIAMAEKELE 172
L S++ F E+ +E
Sbjct: 691 LGSLKFFAYQRERAIE 706
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 223 223 0.00098 112 3 11 22 0.39 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 598 (64 KB)
Total size of DFA: 176 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.46u 0.14s 21.60t Elapsed: 00:00:01
Total cpu time: 21.46u 0.14s 21.60t Elapsed: 00:00:01
Start: Thu May 9 17:01:24 2013 End: Thu May 9 17:01:25 2013