Query 036520
Match_columns 473
No_of_seqs 135 out of 1304
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 04:03:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036520.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036520hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 9.3E-65 3.2E-69 501.7 36.4 433 3-467 12-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 1.7E-59 6E-64 471.9 39.1 439 3-468 5-469 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 3.7E-60 1.2E-64 478.5 31.1 448 2-470 6-481 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 2.1E-57 7.3E-62 453.8 33.2 436 3-469 6-453 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 1.5E-56 5.1E-61 448.9 31.5 433 3-467 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 7.9E-47 2.7E-51 376.7 28.6 401 3-467 11-421 (424)
7 4amg_A Snogd; transferase, pol 100.0 9.3E-48 3.2E-52 380.5 17.7 371 3-464 21-397 (400)
8 1iir_A Glycosyltransferase GTF 100.0 2E-44 6.7E-49 358.2 21.7 377 5-466 1-399 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 2.1E-44 7.1E-49 358.2 16.4 380 5-468 1-401 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 6.2E-42 2.1E-46 340.4 25.5 389 3-467 19-413 (415)
11 3h4t_A Glycosyltransferase GTF 100.0 6.9E-42 2.3E-46 338.3 23.3 380 5-468 1-383 (404)
12 3ia7_A CALG4; glycosysltransfe 100.0 5.3E-41 1.8E-45 332.2 27.3 391 5-468 5-399 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 2.1E-40 7E-45 331.9 21.6 390 3-468 19-436 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 4.7E-40 1.6E-44 328.4 24.0 383 5-466 8-398 (430)
15 2p6p_A Glycosyl transferase; X 100.0 3.3E-40 1.1E-44 324.6 19.3 363 5-469 1-381 (384)
16 4fzr_A SSFS6; structural genom 100.0 4.9E-38 1.7E-42 310.5 18.5 370 3-463 14-396 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 4.6E-37 1.6E-41 303.6 25.0 366 3-466 19-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 2.7E-36 9.4E-41 297.3 20.1 373 4-467 1-388 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 6.9E-34 2.4E-38 282.1 26.9 382 3-468 19-409 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 2E-29 6.7E-34 245.1 21.0 343 1-467 1-356 (365)
21 2o6l_A UDP-glucuronosyltransfe 100.0 4.6E-28 1.6E-32 209.5 12.5 162 269-450 7-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 2.6E-20 8.8E-25 181.1 21.6 337 5-468 7-356 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 2.3E-15 8E-20 138.8 15.0 117 283-412 157-275 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 2.1E-15 7.3E-20 133.3 6.4 138 281-429 26-196 (224)
25 3okp_A GDP-mannose-dependent a 99.5 3.7E-12 1.3E-16 124.5 25.6 352 1-471 1-381 (394)
26 3c48_A Predicted glycosyltrans 99.5 1.8E-11 6.1E-16 121.6 27.0 349 2-442 18-398 (438)
27 2gek_A Phosphatidylinositol ma 99.5 2.6E-11 8.8E-16 119.1 26.5 345 1-469 17-383 (406)
28 2jjm_A Glycosyl transferase, g 99.4 6.6E-10 2.3E-14 108.7 32.1 348 5-469 16-385 (394)
29 3fro_A GLGA glycogen synthase; 99.4 6.5E-11 2.2E-15 117.3 23.6 390 3-469 1-430 (439)
30 2r60_A Glycosyl transferase, g 99.4 2.9E-11 1E-15 122.3 21.1 387 1-467 4-457 (499)
31 1v4v_A UDP-N-acetylglucosamine 99.3 8.5E-12 2.9E-16 121.4 13.4 137 283-444 198-343 (376)
32 3ot5_A UDP-N-acetylglucosamine 99.3 7.7E-12 2.6E-16 122.5 10.3 162 282-467 223-393 (403)
33 3dzc_A UDP-N-acetylglucosamine 99.3 1.1E-11 3.6E-16 121.4 9.8 140 283-446 230-378 (396)
34 1vgv_A UDP-N-acetylglucosamine 99.3 4.4E-11 1.5E-15 116.6 13.5 158 283-464 205-371 (384)
35 2iw1_A Lipopolysaccharide core 99.3 2E-09 6.9E-14 104.2 25.2 139 284-443 196-345 (374)
36 3beo_A UDP-N-acetylglucosamine 99.3 7.2E-11 2.5E-15 114.6 14.9 85 343-443 263-350 (375)
37 2iuy_A Avigt4, glycosyltransfe 99.1 1.6E-09 5.5E-14 103.7 16.9 125 286-431 164-307 (342)
38 2x6q_A Trehalose-synthase TRET 99.1 3.2E-09 1.1E-13 104.5 19.3 111 342-468 292-413 (416)
39 4hwg_A UDP-N-acetylglucosamine 99.0 6.4E-10 2.2E-14 107.9 6.7 159 283-466 203-374 (385)
40 1rzu_A Glycogen synthase 1; gl 98.9 1.2E-07 4.2E-12 95.2 22.9 163 285-470 292-476 (485)
41 3s28_A Sucrose synthase 1; gly 98.9 1.4E-07 4.6E-12 99.4 22.5 168 284-467 572-767 (816)
42 2qzs_A Glycogen synthase; glyc 98.8 5.8E-07 2E-11 90.2 23.9 160 285-469 293-476 (485)
43 3oy2_A Glycosyltransferase B73 98.8 2.5E-06 8.5E-11 83.6 25.9 170 284-469 184-390 (413)
44 2hy7_A Glucuronosyltransferase 98.7 3.3E-06 1.1E-10 82.7 23.1 72 343-431 265-351 (406)
45 2f9f_A First mannosyl transfer 98.5 3.7E-07 1.3E-11 78.3 10.3 141 285-447 24-175 (177)
46 2vsy_A XCC0866; transferase, g 98.5 3.2E-05 1.1E-09 79.1 24.1 112 343-467 434-557 (568)
47 2x0d_A WSAF; GT4 family, trans 98.3 2.1E-05 7E-10 77.0 17.8 84 343-441 295-385 (413)
48 2xci_A KDO-transferase, 3-deox 98.2 5.9E-05 2E-09 72.8 17.3 96 344-448 261-362 (374)
49 3qhp_A Type 1 capsular polysac 97.8 0.00013 4.3E-09 61.3 10.6 134 284-442 2-147 (166)
50 3tov_A Glycosyl transferase fa 97.6 0.0051 1.7E-07 58.5 20.1 104 4-142 8-115 (349)
51 2bfw_A GLGA glycogen synthase; 97.4 0.0016 5.3E-08 56.3 12.2 77 344-432 96-181 (200)
52 1psw_A ADP-heptose LPS heptosy 97.4 0.003 1E-07 60.0 15.1 103 5-142 1-106 (348)
53 4gyw_A UDP-N-acetylglucosamine 97.2 0.0016 5.5E-08 68.2 11.8 102 282-388 521-629 (723)
54 3q3e_A HMW1C-like glycosyltran 97.2 0.0018 6.1E-08 65.3 10.4 148 284-444 441-597 (631)
55 2gt1_A Lipopolysaccharide hept 97.1 0.011 3.6E-07 55.6 14.8 45 5-49 1-47 (326)
56 3rhz_A GTF3, nucleotide sugar 97.0 0.00083 2.9E-08 63.5 6.0 108 344-463 215-334 (339)
57 3vue_A GBSS-I, granule-bound s 95.1 0.18 6.2E-06 50.7 12.3 171 283-469 326-511 (536)
58 2phj_A 5'-nucleotidase SURE; S 93.3 0.59 2E-05 41.3 10.1 113 5-145 2-127 (251)
59 3ty2_A 5'-nucleotidase SURE; s 92.1 0.3 1E-05 43.4 6.7 43 3-47 10-52 (261)
60 2wqk_A 5'-nucleotidase SURE; S 90.6 1.9 6.5E-05 38.2 10.4 112 6-145 3-127 (251)
61 1j9j_A Stationary phase surviV 88.9 2.1 7.3E-05 37.7 9.2 115 5-145 1-128 (247)
62 3zqu_A Probable aromatic acid 88.2 0.55 1.9E-05 40.4 4.9 46 1-47 1-46 (209)
63 1l5x_A SurviVal protein E; str 88.2 4.3 0.00015 36.5 10.9 114 5-146 1-128 (280)
64 3dfz_A SIRC, precorrin-2 dehyd 88.0 12 0.00042 32.3 14.8 156 276-453 26-187 (223)
65 1uqt_A Alpha, alpha-trehalose- 86.3 4.3 0.00015 40.0 10.8 107 344-468 332-453 (482)
66 2e6c_A 5'-nucleotidase SURE; S 85.7 7.6 0.00026 34.1 10.9 116 5-145 1-129 (244)
67 2v4n_A Multifunctional protein 85.0 3.7 0.00013 36.3 8.6 43 4-48 1-43 (254)
68 3vue_A GBSS-I, granule-bound s 83.1 1.2 4.1E-05 44.6 5.2 40 3-42 8-53 (536)
69 2iz6_A Molybdenum cofactor car 82.1 2.6 8.9E-05 35.1 6.0 101 271-390 35-140 (176)
70 3qjg_A Epidermin biosynthesis 80.3 2.3 8E-05 35.3 5.1 43 5-48 6-48 (175)
71 1g5t_A COB(I)alamin adenosyltr 80.1 9 0.00031 32.4 8.8 98 6-126 30-130 (196)
72 3q0i_A Methionyl-tRNA formyltr 77.9 27 0.00091 32.0 12.0 36 1-41 4-39 (318)
73 3t5t_A Putative glycosyltransf 77.7 11 0.00037 37.1 9.8 106 344-466 353-470 (496)
74 3nb0_A Glycogen [starch] synth 77.7 7.5 0.00026 39.7 8.7 41 348-390 498-551 (725)
75 3lqk_A Dipicolinate synthase s 75.5 4.4 0.00015 34.5 5.5 44 4-48 7-51 (201)
76 2bw0_A 10-FTHFDH, 10-formyltet 75.1 5.1 0.00017 37.1 6.4 42 106-147 89-131 (329)
77 3vot_A L-amino acid ligase, BL 74.3 11 0.00036 36.3 8.8 34 107-140 66-101 (425)
78 3auf_A Glycinamide ribonucleot 71.5 13 0.00045 32.3 7.8 108 3-145 21-131 (229)
79 3iqw_A Tail-anchored protein t 70.7 6.8 0.00023 36.4 6.2 38 5-42 16-54 (334)
80 1g63_A Epidermin modifying enz 69.5 4.4 0.00015 33.9 4.1 46 1-49 1-46 (181)
81 1sbz_A Probable aromatic acid 69.1 4.6 0.00016 34.2 4.2 43 5-48 1-44 (197)
82 1mvl_A PPC decarboxylase athal 68.8 7.6 0.00026 33.2 5.5 44 4-49 19-62 (209)
83 1fmt_A Methionyl-tRNA FMet for 68.1 9.3 0.00032 35.1 6.4 97 2-146 1-112 (314)
84 1ccw_A Protein (glutamate muta 66.8 9.4 0.00032 30.1 5.4 39 1-40 1-39 (137)
85 3mcu_A Dipicolinate synthase, 66.0 6.8 0.00023 33.5 4.6 42 3-45 4-46 (207)
86 4b4o_A Epimerase family protei 65.2 5.9 0.0002 35.8 4.5 32 5-40 1-32 (298)
87 4dim_A Phosphoribosylglycinami 64.1 13 0.00045 35.3 6.9 36 1-41 4-39 (403)
88 2zki_A 199AA long hypothetical 63.3 6.6 0.00023 33.1 4.2 39 1-40 1-40 (199)
89 2ywr_A Phosphoribosylglycinami 62.3 19 0.00065 30.9 6.9 106 5-145 2-110 (216)
90 1xmp_A PURE, phosphoribosylami 62.3 54 0.0018 26.7 8.9 140 283-450 11-160 (170)
91 2vqe_B 30S ribosomal protein S 61.9 45 0.0015 29.4 9.2 33 115-147 157-191 (256)
92 3kcq_A Phosphoribosylglycinami 61.6 11 0.00037 32.4 5.1 104 1-145 5-112 (215)
93 1kyq_A Met8P, siroheme biosynt 60.8 91 0.0031 27.7 14.1 156 276-451 8-209 (274)
94 2fb6_A Conserved hypothetical 60.5 7.5 0.00026 29.8 3.6 42 1-42 4-49 (117)
95 2yxb_A Coenzyme B12-dependent 60.2 8.7 0.0003 31.3 4.1 39 3-41 17-55 (161)
96 2i2c_A Probable inorganic poly 58.9 4.2 0.00014 36.6 2.2 51 363-432 37-93 (272)
97 3oow_A Phosphoribosylaminoimid 58.3 28 0.00095 28.3 6.6 140 284-450 6-154 (166)
98 1qzu_A Hypothetical protein MD 58.2 9.8 0.00034 32.5 4.2 45 4-49 19-64 (206)
99 1p3y_1 MRSD protein; flavoprot 57.8 4.8 0.00017 34.0 2.2 44 4-48 8-51 (194)
100 3io3_A DEHA2D07832P; chaperone 57.1 12 0.0004 35.0 4.9 39 4-42 17-58 (348)
101 2ejb_A Probable aromatic acid 55.5 17 0.00058 30.5 5.2 42 6-48 3-44 (189)
102 3av3_A Phosphoribosylglycinami 54.7 40 0.0014 28.7 7.6 106 5-145 4-112 (212)
103 2r85_A PURP protein PF1517; AT 54.6 12 0.0004 34.4 4.5 33 4-42 2-34 (334)
104 4b4k_A N5-carboxyaminoimidazol 53.7 54 0.0018 27.0 7.6 140 283-450 22-171 (181)
105 3dhn_A NAD-dependent epimerase 53.5 11 0.00039 32.1 4.0 38 1-42 1-38 (227)
106 2l2q_A PTS system, cellobiose- 53.2 19 0.00065 27.0 4.7 36 3-38 3-38 (109)
107 3mc3_A DSRE/DSRF-like family p 52.3 16 0.00056 28.5 4.4 41 5-45 16-59 (134)
108 1y80_A Predicted cobalamin bin 52.2 18 0.00063 30.7 5.1 38 4-41 88-125 (210)
109 1pjq_A CYSG, siroheme synthase 51.7 1.7E+02 0.0059 28.1 15.9 148 283-451 13-167 (457)
110 1lss_A TRK system potassium up 51.4 18 0.00061 27.9 4.6 33 4-41 4-36 (140)
111 1u0t_A Inorganic polyphosphate 51.3 18 0.00062 32.9 5.2 56 356-432 72-131 (307)
112 2i2x_B MTAC, methyltransferase 51.2 23 0.00078 31.4 5.7 38 3-40 122-159 (258)
113 2hy5_A Putative sulfurtransfer 51.1 22 0.00075 27.6 5.0 42 5-46 1-46 (130)
114 1jkx_A GART;, phosphoribosylgl 50.9 49 0.0017 28.2 7.5 106 5-145 1-109 (212)
115 4hcj_A THIJ/PFPI domain protei 50.9 26 0.0009 28.9 5.7 41 1-42 4-45 (177)
116 3lp6_A Phosphoribosylaminoimid 49.8 76 0.0026 26.0 7.9 138 284-450 8-154 (174)
117 4grd_A N5-CAIR mutase, phospho 49.7 30 0.001 28.3 5.5 140 283-450 12-161 (173)
118 1u11_A PURE (N5-carboxyaminoim 48.9 1E+02 0.0034 25.4 8.5 138 284-450 22-170 (182)
119 2a33_A Hypothetical protein; s 48.6 56 0.0019 27.9 7.5 44 346-389 94-147 (215)
120 2r8r_A Sensor protein; KDPD, P 48.3 26 0.0009 30.3 5.4 39 4-42 6-44 (228)
121 3r8n_B 30S ribosomal protein S 48.2 55 0.0019 28.0 7.3 32 116-147 149-182 (218)
122 1id1_A Putative potassium chan 48.2 15 0.0005 29.3 3.7 32 5-41 4-35 (153)
123 3tqq_A Methionyl-tRNA formyltr 47.8 1.3E+02 0.0044 27.3 10.3 99 3-146 1-111 (314)
124 3ors_A N5-carboxyaminoimidazol 47.8 45 0.0016 27.0 6.2 136 285-450 5-152 (163)
125 3pdi_B Nitrogenase MOFE cofact 47.6 16 0.00054 35.6 4.4 34 107-143 366-399 (458)
126 3cky_A 2-hydroxymethyl glutara 47.6 18 0.00062 32.6 4.6 35 1-40 1-35 (301)
127 3nrb_A Formyltetrahydrofolate 47.3 1.6E+02 0.0054 26.4 11.4 104 2-145 86-195 (287)
128 2lpm_A Two-component response 47.3 15 0.00053 28.2 3.4 37 107-143 44-85 (123)
129 3kuu_A Phosphoribosylaminoimid 47.1 57 0.0019 26.7 6.8 138 285-450 14-161 (174)
130 3igf_A ALL4481 protein; two-do 47.0 9 0.00031 36.2 2.4 36 5-40 2-38 (374)
131 3gl9_A Response regulator; bet 46.7 32 0.0011 25.6 5.3 40 108-147 38-86 (122)
132 1bg6_A N-(1-D-carboxylethyl)-L 46.7 13 0.00046 34.5 3.6 35 1-40 1-35 (359)
133 3trh_A Phosphoribosylaminoimid 46.1 70 0.0024 26.0 7.1 140 284-450 7-155 (169)
134 3to5_A CHEY homolog; alpha(5)b 46.0 29 0.001 27.0 4.9 39 109-147 50-97 (134)
135 3l7i_A Teichoic acid biosynthe 45.5 27 0.00092 36.2 6.0 110 347-467 603-719 (729)
136 3qvl_A Putative hydantoin race 44.9 1.5E+02 0.0052 25.7 10.0 38 4-41 1-39 (245)
137 3tqr_A Phosphoribosylglycinami 44.7 44 0.0015 28.6 6.2 41 105-145 72-113 (215)
138 1o4v_A Phosphoribosylaminoimid 43.7 57 0.002 26.9 6.3 139 284-451 14-161 (183)
139 3s2u_A UDP-N-acetylglucosamine 43.5 38 0.0013 31.5 6.3 26 359-386 92-120 (365)
140 1qyd_A Pinoresinol-lariciresin 43.4 23 0.00078 31.9 4.6 37 1-41 1-37 (313)
141 3obi_A Formyltetrahydrofolate 43.2 1.6E+02 0.0055 26.3 10.0 104 2-145 87-196 (288)
142 3rg8_A Phosphoribosylaminoimid 43.2 1.2E+02 0.004 24.5 8.0 135 285-450 4-147 (159)
143 3sbx_A Putative uncharacterize 43.2 87 0.003 26.1 7.6 100 272-388 35-145 (189)
144 2ywx_A Phosphoribosylaminoimid 42.6 1.1E+02 0.0036 24.6 7.6 135 286-451 2-143 (157)
145 1o97_C Electron transferring f 41.9 32 0.0011 30.5 5.1 40 106-145 102-147 (264)
146 1hdo_A Biliverdin IX beta redu 41.5 32 0.0011 28.5 4.9 36 1-41 1-36 (206)
147 2yrx_A Phosphoribosylglycinami 41.4 81 0.0028 30.3 8.4 34 2-40 19-53 (451)
148 1rcu_A Conserved hypothetical 41.2 1.1E+02 0.0039 25.5 8.2 96 271-388 48-149 (195)
149 3tqr_A Phosphoribosylglycinami 41.0 1.6E+02 0.0055 25.0 9.2 69 368-446 119-189 (215)
150 3g1w_A Sugar ABC transporter; 39.9 1E+02 0.0035 27.2 8.5 39 1-39 1-41 (305)
151 1jx7_A Hypothetical protein YC 39.8 33 0.0011 25.6 4.3 42 6-47 3-49 (117)
152 2an1_A Putative kinase; struct 39.8 16 0.00053 33.1 2.8 57 355-432 59-119 (292)
153 1efv_B Electron transfer flavo 39.8 37 0.0013 30.0 5.1 40 106-145 106-151 (255)
154 3kjh_A CO dehydrogenase/acetyl 39.7 19 0.00066 31.1 3.3 38 5-42 1-38 (254)
155 3ezx_A MMCP 1, monomethylamine 39.6 35 0.0012 29.1 4.9 38 4-41 92-129 (215)
156 1yt5_A Inorganic polyphosphate 39.4 12 0.00043 33.1 2.0 52 360-432 42-96 (258)
157 2hy5_B Intracellular sulfur ox 39.4 31 0.0011 27.0 4.1 47 1-47 1-51 (136)
158 4hb9_A Similarities with proba 39.3 20 0.00068 33.7 3.6 31 4-39 1-31 (412)
159 3t6k_A Response regulator rece 39.2 51 0.0018 25.0 5.5 41 107-147 39-88 (136)
160 2b8t_A Thymidine kinase; deoxy 39.2 79 0.0027 27.1 7.0 37 6-42 13-50 (223)
161 3kcq_A Phosphoribosylglycinami 39.0 1.7E+02 0.0059 24.8 9.1 69 368-446 118-188 (215)
162 3da8_A Probable 5'-phosphoribo 38.9 25 0.00085 30.2 3.7 41 105-145 78-119 (215)
163 4gi5_A Quinone reductase; prot 38.9 47 0.0016 29.8 5.7 37 3-39 21-60 (280)
164 3qua_A Putative uncharacterize 38.4 89 0.003 26.3 7.0 100 272-388 44-154 (199)
165 3kkl_A Probable chaperone prot 38.4 51 0.0017 28.8 5.8 40 1-41 1-51 (244)
166 3qha_A Putative oxidoreductase 38.3 17 0.00058 32.9 2.8 35 1-40 12-46 (296)
167 2qs7_A Uncharacterized protein 38.1 35 0.0012 27.0 4.3 43 6-48 9-52 (144)
168 1ydh_A AT5G11950; structural g 38.0 35 0.0012 29.2 4.5 44 345-389 89-143 (216)
169 2a3d_A Protein (de novo three- 37.9 28 0.00096 22.1 2.8 31 436-466 5-35 (73)
170 2d1p_A TUSD, hypothetical UPF0 37.9 45 0.0015 26.3 4.8 42 4-45 12-57 (140)
171 3ew7_A LMO0794 protein; Q8Y8U8 37.9 33 0.0011 28.8 4.5 33 5-41 1-33 (221)
172 1efp_B ETF, protein (electron 37.8 37 0.0013 29.9 4.8 40 106-145 103-148 (252)
173 1ehi_A LMDDL2, D-alanine:D-lac 37.7 30 0.001 32.5 4.5 39 1-40 1-44 (377)
174 3nrb_A Formyltetrahydrofolate 36.9 1.6E+02 0.0055 26.3 9.0 113 303-445 156-270 (287)
175 3f6p_A Transcriptional regulat 36.8 57 0.002 24.0 5.3 41 107-147 37-83 (120)
176 3lrx_A Putative hydrogenase; a 36.8 29 0.001 27.9 3.7 36 6-44 25-60 (158)
177 3m6m_D Sensory/regulatory prot 36.3 44 0.0015 25.8 4.7 40 107-146 49-99 (143)
178 3n7t_A Macrophage binding prot 35.8 67 0.0023 28.1 6.2 37 5-41 10-57 (247)
179 2bru_C NAD(P) transhydrogenase 35.6 45 0.0015 27.1 4.3 37 6-42 32-71 (186)
180 3o1l_A Formyltetrahydrofolate 35.6 2.4E+02 0.0081 25.4 9.9 68 368-445 217-286 (302)
181 2gk4_A Conserved hypothetical 35.0 50 0.0017 28.6 5.1 26 15-42 28-53 (232)
182 1qyc_A Phenylcoumaran benzylic 35.0 37 0.0013 30.4 4.6 37 1-41 1-37 (308)
183 3da8_A Probable 5'-phosphoribo 35.0 2.1E+02 0.0072 24.3 10.9 70 368-447 125-196 (215)
184 1kjn_A MTH0777; hypotethical p 35.0 36 0.0012 27.0 3.6 45 3-47 5-51 (157)
185 1mio_B Nitrogenase molybdenum 34.6 34 0.0012 33.2 4.4 34 107-143 376-409 (458)
186 3s40_A Diacylglycerol kinase; 34.6 57 0.002 29.5 5.7 26 364-389 66-97 (304)
187 3o1l_A Formyltetrahydrofolate 34.6 1.1E+02 0.0037 27.7 7.4 104 2-145 103-211 (302)
188 2bon_A Lipid kinase; DAG kinas 34.4 77 0.0026 29.0 6.7 81 282-389 30-118 (332)
189 1t35_A Hypothetical protein YV 34.4 68 0.0023 26.7 5.7 103 271-389 23-135 (191)
190 1p9o_A Phosphopantothenoylcyst 33.6 32 0.0011 31.4 3.7 37 7-43 40-90 (313)
191 1ydg_A Trp repressor binding p 33.3 50 0.0017 27.7 4.9 38 2-39 4-42 (211)
192 2wm1_A 2-amino-3-carboxymucona 32.9 53 0.0018 30.0 5.3 69 244-320 105-176 (336)
193 3enk_A UDP-glucose 4-epimerase 32.8 43 0.0015 30.5 4.7 36 1-40 2-37 (341)
194 1iow_A DD-ligase, DDLB, D-ALA\ 32.7 55 0.0019 29.2 5.4 38 4-41 2-43 (306)
195 3u7q_A Nitrogenase molybdenum- 32.7 30 0.001 34.0 3.7 34 107-143 408-441 (492)
196 3u7q_B Nitrogenase molybdenum- 32.6 42 0.0014 33.2 4.7 34 107-143 429-469 (523)
197 3auf_A Glycinamide ribonucleot 32.6 2.4E+02 0.0081 24.2 9.7 114 303-446 92-207 (229)
198 3pnx_A Putative sulfurtransfer 32.4 64 0.0022 26.1 5.0 49 1-49 2-50 (160)
199 3tsa_A SPNG, NDP-rhamnosyltran 32.4 47 0.0016 30.9 5.0 28 359-388 114-142 (391)
200 3pdi_A Nitrogenase MOFE cofact 32.2 29 0.00098 34.0 3.4 34 107-143 392-425 (483)
201 3obi_A Formyltetrahydrofolate 32.1 1.8E+02 0.0061 26.0 8.4 113 303-445 157-271 (288)
202 3hly_A Flavodoxin-like domain; 31.7 54 0.0018 26.3 4.6 36 5-40 1-37 (161)
203 3c3m_A Response regulator rece 31.7 74 0.0025 24.1 5.3 40 107-146 38-86 (138)
204 3cg0_A Response regulator rece 31.6 66 0.0023 24.2 5.0 42 107-148 45-93 (140)
205 1jkx_A GART;, phosphoribosylgl 31.4 2.4E+02 0.0081 23.8 9.7 69 368-446 115-185 (212)
206 1dbw_A Transcriptional regulat 31.2 76 0.0026 23.4 5.2 41 107-147 38-85 (126)
207 3aek_B Light-independent proto 31.0 31 0.0011 34.1 3.5 34 107-143 340-373 (525)
208 1oi4_A Hypothetical protein YH 31.0 1E+02 0.0035 25.5 6.4 41 1-42 20-60 (193)
209 1meo_A Phosophoribosylglycinam 30.9 2.4E+02 0.0082 23.7 10.6 70 368-447 115-186 (209)
210 2xdq_B Light-independent proto 30.9 31 0.0011 34.0 3.5 35 107-144 363-397 (511)
211 2q5c_A NTRC family transcripti 30.9 69 0.0024 26.8 5.2 122 16-150 36-173 (196)
212 4ds3_A Phosphoribosylglycinami 30.8 2.4E+02 0.0083 23.7 9.6 114 302-445 76-191 (209)
213 1rtt_A Conserved hypothetical 30.7 22 0.00074 29.7 2.0 38 1-39 3-43 (193)
214 2qv7_A Diacylglycerol kinase D 30.6 47 0.0016 30.6 4.5 27 363-389 82-114 (337)
215 3a10_A Response regulator; pho 30.4 1E+02 0.0035 22.1 5.8 40 107-146 36-82 (116)
216 3h4t_A Glycosyltransferase GTF 30.4 93 0.0032 29.2 6.7 35 285-321 3-37 (404)
217 3f6r_A Flavodoxin; FMN binding 30.3 63 0.0022 25.2 4.7 38 5-42 2-40 (148)
218 4hn9_A Iron complex transport 30.2 45 0.0015 30.6 4.3 36 110-145 110-145 (335)
219 2ip4_A PURD, phosphoribosylami 29.7 1.5E+02 0.0053 27.8 8.2 31 5-40 1-32 (417)
220 3lou_A Formyltetrahydrofolate 29.6 2.1E+02 0.0071 25.6 8.4 68 368-445 207-276 (292)
221 2g1u_A Hypothetical protein TM 29.5 52 0.0018 26.0 4.1 33 4-41 19-51 (155)
222 3n0v_A Formyltetrahydrofolate 29.5 2.3E+02 0.0079 25.3 8.7 69 368-446 202-272 (286)
223 4e5s_A MCCFLIKE protein (BA_56 29.4 72 0.0025 29.3 5.4 30 296-325 62-91 (331)
224 3gt7_A Sensor protein; structu 28.9 77 0.0026 24.6 5.1 41 107-147 42-91 (154)
225 1eiw_A Hypothetical protein MT 28.9 67 0.0023 24.1 4.2 64 358-431 37-109 (111)
226 3svl_A Protein YIEF; E. coli C 28.9 13 0.00045 31.3 0.3 35 1-36 1-38 (193)
227 1tmy_A CHEY protein, TMY; chem 28.8 88 0.003 22.7 5.2 40 108-147 39-85 (120)
228 2x4g_A Nucleoside-diphosphate- 28.8 56 0.0019 29.7 4.7 34 4-41 13-46 (342)
229 1f4p_A Flavodoxin; electron tr 28.8 48 0.0016 25.9 3.7 36 5-40 1-37 (147)
230 3sbx_A Putative uncharacterize 28.7 89 0.003 26.0 5.4 38 4-41 13-53 (189)
231 3gpi_A NAD-dependent epimerase 28.7 59 0.002 28.7 4.8 32 5-41 4-35 (286)
232 3nbm_A PTS system, lactose-spe 28.6 57 0.0019 24.3 3.8 38 2-39 4-41 (108)
233 2rjn_A Response regulator rece 28.6 77 0.0026 24.5 5.0 42 107-148 42-90 (154)
234 3dfu_A Uncharacterized protein 28.5 39 0.0014 29.3 3.3 34 3-41 5-38 (232)
235 3ius_A Uncharacterized conserv 28.4 46 0.0016 29.4 4.0 33 5-42 6-38 (286)
236 2l82_A Designed protein OR32; 28.4 1.1E+02 0.0039 22.4 5.2 34 285-322 3-36 (162)
237 3l3b_A ES1 family protein; ssg 28.3 1E+02 0.0035 26.8 6.0 36 6-42 25-65 (242)
238 1gsa_A Glutathione synthetase; 28.3 51 0.0017 29.5 4.3 37 5-41 2-41 (316)
239 3ot1_A 4-methyl-5(B-hydroxyeth 28.3 90 0.0031 26.2 5.6 35 6-41 11-45 (208)
240 4e21_A 6-phosphogluconate dehy 28.2 41 0.0014 31.4 3.6 35 1-40 19-53 (358)
241 3e8x_A Putative NAD-dependent 28.2 60 0.0021 27.6 4.6 33 5-41 22-54 (236)
242 3llv_A Exopolyphosphatase-rela 28.2 33 0.0011 26.6 2.6 32 5-41 7-38 (141)
243 1zgz_A Torcad operon transcrip 28.1 91 0.0031 22.7 5.2 41 107-147 37-83 (122)
244 3of5_A Dethiobiotin synthetase 28.1 60 0.0021 27.9 4.5 37 3-39 2-40 (228)
245 2qr3_A Two-component system re 28.1 80 0.0027 23.7 4.9 41 107-147 38-90 (140)
246 1q74_A 1D-MYO-inosityl 2-aceta 28.0 62 0.0021 29.3 4.7 42 1-42 1-42 (303)
247 3dme_A Conserved exported prot 27.9 39 0.0013 31.0 3.5 36 1-41 1-36 (369)
248 2ewd_A Lactate dehydrogenase,; 27.9 30 0.001 31.6 2.6 36 1-41 1-37 (317)
249 3md9_A Hemin-binding periplasm 27.9 54 0.0019 28.5 4.3 35 110-144 53-89 (255)
250 3b2n_A Uncharacterized protein 27.7 82 0.0028 23.6 4.9 41 107-147 40-87 (133)
251 3ia7_A CALG4; glycosysltransfe 27.4 91 0.0031 28.9 6.1 34 285-320 7-40 (402)
252 1e4e_A Vancomycin/teicoplanin 27.3 35 0.0012 31.4 3.0 39 1-40 1-43 (343)
253 3f67_A Putative dienelactone h 27.2 85 0.0029 26.2 5.4 36 5-40 32-67 (241)
254 3dqp_A Oxidoreductase YLBE; al 27.1 51 0.0017 27.7 3.8 34 5-42 1-34 (219)
255 4dzz_A Plasmid partitioning pr 27.0 72 0.0024 26.3 4.8 37 5-41 1-39 (206)
256 1xhf_A DYE resistance, aerobic 26.9 1.1E+02 0.0037 22.3 5.4 40 108-147 39-84 (123)
257 3n0v_A Formyltetrahydrofolate 26.9 1.6E+02 0.0053 26.4 7.1 104 2-145 88-196 (286)
258 1t2d_A LDH-P, L-lactate dehydr 26.8 64 0.0022 29.5 4.6 35 1-40 1-36 (322)
259 2ywr_A Phosphoribosylglycinami 26.8 2.9E+02 0.0098 23.3 9.7 114 303-446 71-186 (216)
260 3av3_A Phosphoribosylglycinami 26.4 2.9E+02 0.0099 23.2 10.2 113 303-445 73-187 (212)
261 3afo_A NADH kinase POS5; alpha 26.3 39 0.0013 31.9 3.1 60 352-432 107-171 (388)
262 3ghy_A Ketopantoate reductase 26.3 37 0.0013 31.2 3.0 34 4-42 3-36 (335)
263 2a9o_A Response regulator; ess 26.3 1.1E+02 0.0036 22.1 5.2 40 108-147 37-82 (120)
264 3l4e_A Uncharacterized peptida 26.3 1.5E+02 0.0052 24.9 6.6 46 273-318 18-63 (206)
265 2h31_A Multifunctional protein 26.1 3.5E+02 0.012 25.7 9.6 137 283-450 265-410 (425)
266 1v5e_A Pyruvate oxidase; oxido 26.0 1.1E+02 0.0039 30.5 6.7 78 302-388 8-101 (590)
267 2xcl_A Phosphoribosylamine--gl 25.8 1.6E+02 0.0055 27.7 7.6 31 5-40 1-32 (422)
268 2rdm_A Response regulator rece 25.8 1.1E+02 0.0038 22.5 5.4 40 107-146 40-88 (132)
269 3lyu_A Putative hydrogenase; t 25.8 46 0.0016 26.1 3.1 35 6-43 20-54 (142)
270 3crn_A Response regulator rece 25.8 1.1E+02 0.0037 22.8 5.3 41 107-147 38-85 (132)
271 2qzj_A Two-component response 25.7 95 0.0032 23.4 4.9 40 108-147 40-85 (136)
272 3eod_A Protein HNR; response r 25.6 1E+02 0.0034 22.8 5.0 41 107-147 42-89 (130)
273 3hn2_A 2-dehydropantoate 2-red 25.6 56 0.0019 29.6 4.0 33 5-42 3-35 (312)
274 2wm3_A NMRA-like family domain 25.6 58 0.002 29.0 4.1 37 1-41 2-39 (299)
275 1ks9_A KPA reductase;, 2-dehyd 25.5 54 0.0018 29.0 3.9 32 5-41 1-32 (291)
276 2ew2_A 2-dehydropantoate 2-red 25.5 47 0.0016 29.8 3.5 32 4-40 3-34 (316)
277 4dll_A 2-hydroxy-3-oxopropiona 25.3 76 0.0026 28.8 4.9 32 4-40 31-62 (320)
278 3p9x_A Phosphoribosylglycinami 25.2 3.1E+02 0.011 23.1 9.9 69 368-446 117-187 (211)
279 1e2b_A Enzyme IIB-cellobiose; 25.2 1.6E+02 0.0056 21.6 5.9 35 5-39 4-38 (106)
280 3i83_A 2-dehydropantoate 2-red 25.2 54 0.0018 29.8 3.8 33 5-42 3-35 (320)
281 1tvm_A PTS system, galactitol- 25.1 1.1E+02 0.0037 22.9 4.9 37 3-39 20-57 (113)
282 1srr_A SPO0F, sporulation resp 25.1 91 0.0031 22.8 4.7 39 109-147 40-85 (124)
283 3vps_A TUNA, NAD-dependent epi 25.0 71 0.0024 28.6 4.7 35 4-42 7-41 (321)
284 2etv_A Iron(III) ABC transport 25.0 58 0.002 30.0 4.1 35 110-144 90-125 (346)
285 3foj_A Uncharacterized protein 24.8 1.4E+02 0.0047 21.3 5.4 31 5-39 57-87 (100)
286 3lou_A Formyltetrahydrofolate 24.6 2.3E+02 0.008 25.3 7.8 104 2-145 93-201 (292)
287 3fwz_A Inner membrane protein 24.5 40 0.0014 26.2 2.5 33 5-42 8-40 (140)
288 4e7p_A Response regulator; DNA 24.5 1E+02 0.0036 23.6 5.1 42 106-147 56-104 (150)
289 3hwr_A 2-dehydropantoate 2-red 24.5 51 0.0017 30.0 3.5 35 3-42 18-52 (318)
290 2pn1_A Carbamoylphosphate synt 24.4 87 0.003 28.3 5.2 33 3-41 3-37 (331)
291 1jzt_A Hypothetical 27.5 kDa p 24.4 57 0.002 28.5 3.6 33 5-40 59-93 (246)
292 3qrx_B Melittin; calcium-bindi 24.4 21 0.00071 18.4 0.4 17 370-386 1-17 (26)
293 2a33_A Hypothetical protein; s 24.3 1.1E+02 0.0036 26.2 5.2 36 6-41 15-54 (215)
294 4e5v_A Putative THUA-like prot 24.3 94 0.0032 27.7 5.1 39 2-41 2-43 (281)
295 2q6t_A DNAB replication FORK h 24.3 69 0.0024 30.8 4.6 37 7-43 203-240 (444)
296 1pno_A NAD(P) transhydrogenase 24.2 79 0.0027 25.6 4.0 37 6-42 25-64 (180)
297 2r7a_A Bacterial heme binding 24.1 70 0.0024 27.7 4.3 35 110-144 53-89 (256)
298 2pl1_A Transcriptional regulat 24.1 1.4E+02 0.0049 21.4 5.6 41 107-147 35-82 (121)
299 3hv2_A Response regulator/HD d 23.9 1E+02 0.0035 23.7 4.9 42 106-147 48-96 (153)
300 4eg0_A D-alanine--D-alanine li 23.9 1.2E+02 0.0042 27.2 6.0 38 4-41 13-54 (317)
301 3d3j_A Enhancer of mRNA-decapp 23.8 59 0.002 29.5 3.7 34 5-41 133-168 (306)
302 1d4o_A NADP(H) transhydrogenas 23.8 81 0.0028 25.6 4.0 37 6-42 24-63 (184)
303 1mb3_A Cell division response 23.8 97 0.0033 22.6 4.6 38 108-145 37-83 (124)
304 3l4b_C TRKA K+ channel protien 23.7 31 0.0011 29.3 1.8 32 5-41 1-32 (218)
305 3l18_A Intracellular protease 23.6 1.7E+02 0.0058 23.2 6.3 39 3-42 1-39 (168)
306 2q8p_A Iron-regulated surface 23.6 61 0.0021 28.2 3.8 36 110-145 54-90 (260)
307 1mio_A Nitrogenase molybdenum 23.6 49 0.0017 32.8 3.4 35 106-143 446-480 (533)
308 3fgn_A Dethiobiotin synthetase 23.5 82 0.0028 27.6 4.5 37 3-39 24-62 (251)
309 1z82_A Glycerol-3-phosphate de 23.5 56 0.0019 29.9 3.6 33 4-41 14-46 (335)
310 2a5l_A Trp repressor binding p 23.4 89 0.0031 25.7 4.7 36 5-40 6-42 (200)
311 3i42_A Response regulator rece 23.3 1.1E+02 0.0038 22.5 4.8 39 107-145 38-85 (127)
312 2i87_A D-alanine-D-alanine lig 23.2 38 0.0013 31.5 2.4 39 1-40 1-43 (364)
313 3cz5_A Two-component response 23.1 1.4E+02 0.0047 22.9 5.6 41 107-147 42-89 (153)
314 3i4f_A 3-oxoacyl-[acyl-carrier 23.0 1.1E+02 0.0036 26.6 5.3 37 2-41 4-40 (264)
315 1rw7_A YDR533CP; alpha-beta sa 23.0 1.5E+02 0.0052 25.5 6.2 37 6-42 5-52 (243)
316 1c0p_A D-amino acid oxidase; a 23.0 65 0.0022 29.6 4.0 35 1-40 3-37 (363)
317 3d3k_A Enhancer of mRNA-decapp 22.9 62 0.0021 28.5 3.6 34 5-41 86-121 (259)
318 3eme_A Rhodanese-like domain p 22.9 1.3E+02 0.0046 21.5 5.0 31 5-39 57-87 (103)
319 1p6q_A CHEY2; chemotaxis, sign 22.8 1.1E+02 0.0038 22.5 4.8 40 107-146 42-90 (129)
320 3kht_A Response regulator; PSI 22.8 1.5E+02 0.005 22.4 5.6 40 107-146 42-90 (144)
321 2m1z_A LMO0427 protein; homolo 22.8 84 0.0029 23.4 3.7 39 4-42 2-43 (106)
322 1y7t_A Malate dehydrogenase; N 22.8 76 0.0026 28.9 4.4 37 1-41 1-44 (327)
323 4gbj_A 6-phosphogluconate dehy 22.8 77 0.0026 28.5 4.3 32 1-39 4-35 (297)
324 3eag_A UDP-N-acetylmuramate:L- 22.7 82 0.0028 28.7 4.6 33 4-40 4-36 (326)
325 3m1a_A Putative dehydrogenase; 22.7 62 0.0021 28.5 3.7 38 1-41 1-38 (281)
326 2rir_A Dipicolinate synthase, 22.7 99 0.0034 27.7 5.1 34 1-39 4-37 (300)
327 1f0y_A HCDH, L-3-hydroxyacyl-C 22.7 51 0.0018 29.6 3.1 31 5-40 16-46 (302)
328 4fu0_A D-alanine--D-alanine li 22.6 47 0.0016 30.8 2.9 38 1-39 1-42 (357)
329 3cfy_A Putative LUXO repressor 22.6 1.1E+02 0.0039 23.0 4.9 40 108-147 40-86 (137)
330 1hjr_A Holliday junction resol 22.5 1.1E+02 0.0038 24.6 4.7 46 100-145 43-103 (158)
331 3cu5_A Two component transcrip 22.5 1.1E+02 0.0039 23.1 4.9 37 109-145 42-85 (141)
332 3r5x_A D-alanine--D-alanine li 22.4 38 0.0013 30.4 2.2 40 3-42 2-45 (307)
333 3h2s_A Putative NADH-flavin re 22.4 66 0.0022 27.0 3.6 33 5-41 1-33 (224)
334 2ehd_A Oxidoreductase, oxidore 22.4 1E+02 0.0036 26.0 5.0 37 1-40 1-37 (234)
335 2vo1_A CTP synthase 1; pyrimid 22.4 91 0.0031 27.6 4.3 45 3-47 21-68 (295)
336 1q5z_A SIPA, SIPA; cell invasi 22.3 1.5E+02 0.0051 22.4 4.9 51 416-469 87-137 (177)
337 1y56_B Sarcosine oxidase; dehy 22.3 49 0.0017 30.7 3.0 36 1-41 2-37 (382)
338 1zi8_A Carboxymethylenebutenol 22.1 1.1E+02 0.0039 25.2 5.2 34 6-39 29-62 (236)
339 3g79_A NDP-N-acetyl-D-galactos 22.0 77 0.0027 30.8 4.4 36 2-42 16-53 (478)
340 3gg2_A Sugar dehydrogenase, UD 22.0 61 0.0021 31.3 3.7 32 5-41 3-34 (450)
341 3doj_A AT3G25530, dehydrogenas 22.0 79 0.0027 28.5 4.3 33 3-40 20-52 (310)
342 1qgu_B Protein (nitrogenase mo 21.9 68 0.0023 31.6 4.0 33 108-143 426-465 (519)
343 3lte_A Response regulator; str 21.9 1.6E+02 0.0054 21.7 5.5 39 108-146 42-88 (132)
344 2fsv_C NAD(P) transhydrogenase 21.6 92 0.0031 25.9 4.0 37 6-42 48-87 (203)
345 4fbl_A LIPS lipolytic enzyme; 21.6 61 0.0021 28.5 3.4 31 8-38 54-84 (281)
346 1n2z_A Vitamin B12 transport p 21.6 84 0.0029 27.0 4.2 36 110-145 51-88 (245)
347 4e12_A Diketoreductase; oxidor 21.6 77 0.0026 28.2 4.1 35 1-40 1-35 (283)
348 4h1h_A LMO1638 protein; MCCF-l 21.6 1.2E+02 0.0041 27.7 5.4 30 296-325 62-91 (327)
349 3bul_A Methionine synthase; tr 21.5 96 0.0033 31.0 4.9 39 4-42 98-136 (579)
350 3c1o_A Eugenol synthase; pheny 21.5 85 0.0029 28.2 4.4 33 5-41 5-37 (321)
351 1zl0_A Hypothetical protein PA 21.4 1.4E+02 0.0049 27.0 5.8 32 294-325 62-93 (311)
352 2o8n_A APOA-I binding protein; 21.4 77 0.0026 28.1 3.8 33 5-40 80-114 (265)
353 3c97_A Signal transduction his 21.4 1.6E+02 0.0055 22.0 5.5 28 107-134 45-74 (140)
354 1djl_A Transhydrogenase DIII; 21.2 94 0.0032 25.9 4.0 37 6-42 47-86 (207)
355 3tqt_A D-alanine--D-alanine li 21.2 57 0.0019 30.5 3.2 41 1-41 1-45 (372)
356 3g0o_A 3-hydroxyisobutyrate de 21.1 53 0.0018 29.6 2.9 33 3-40 6-38 (303)
357 3psh_A Protein HI_1472; substr 21.0 84 0.0029 28.5 4.3 36 110-145 78-114 (326)
358 2w36_A Endonuclease V; hypoxan 21.0 60 0.0021 27.9 2.9 39 107-145 92-139 (225)
359 1ycd_A Hypothetical 27.3 kDa p 21.0 1.3E+02 0.0044 25.3 5.3 41 1-41 1-45 (243)
360 3sr3_A Microcin immunity prote 20.8 1.2E+02 0.0042 27.8 5.3 30 296-325 63-92 (336)
361 2q3e_A UDP-glucose 6-dehydroge 20.7 85 0.0029 30.4 4.4 35 1-40 2-38 (467)
362 2j48_A Two-component sensor ki 20.7 1.4E+02 0.0049 21.1 4.9 40 107-146 36-84 (119)
363 1u0t_A Inorganic polyphosphate 20.6 95 0.0032 28.1 4.5 40 1-40 1-41 (307)
364 3kkj_A Amine oxidase, flavin-c 20.6 55 0.0019 28.0 2.9 19 22-40 15-33 (336)
365 2d1p_B TUSC, hypothetical UPF0 20.5 2.3E+02 0.0078 21.2 6.0 41 8-48 6-48 (119)
366 1jbe_A Chemotaxis protein CHEY 20.5 1.5E+02 0.0052 21.6 5.2 39 108-146 41-88 (128)
367 3qua_A Putative uncharacterize 20.5 1.6E+02 0.0056 24.6 5.5 38 4-41 22-62 (199)
368 1wcv_1 SOJ, segregation protei 20.4 72 0.0025 27.7 3.6 39 4-42 5-45 (257)
369 1qkk_A DCTD, C4-dicarboxylate 20.4 83 0.0028 24.3 3.7 58 380-445 74-131 (155)
370 3bfv_A CAPA1, CAPB2, membrane 20.4 97 0.0033 27.3 4.4 40 3-42 80-121 (271)
371 2raf_A Putative dinucleotide-b 20.4 85 0.0029 26.4 3.9 32 4-40 19-50 (209)
372 3i12_A D-alanine-D-alanine lig 20.3 57 0.002 30.3 3.0 39 2-40 1-43 (364)
373 3eul_A Possible nitrate/nitrit 20.3 1.2E+02 0.0042 23.2 4.7 42 106-147 51-99 (152)
374 2wtm_A EST1E; hydrolase; 1.60A 20.2 1.4E+02 0.0049 25.2 5.5 34 6-39 28-63 (251)
375 2dzd_A Pyruvate carboxylase; b 20.2 1E+02 0.0034 29.7 4.8 37 1-42 1-39 (461)
376 2r79_A Periplasmic binding pro 20.1 1E+02 0.0034 27.3 4.5 35 110-144 53-89 (283)
377 3k96_A Glycerol-3-phosphate de 20.1 59 0.002 30.2 3.0 33 4-41 29-61 (356)
378 3e5n_A D-alanine-D-alanine lig 20.1 58 0.002 30.6 3.0 39 3-41 21-63 (386)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=9.3e-65 Score=501.66 Aligned_cols=433 Identities=23% Similarity=0.319 Sum_probs=333.3
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCC--CeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSG--VKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLP 80 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~G--h~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~ 80 (473)
+++||+++|++++||++||++||+.|+++| +.|||++++.+...+..... ...++|+|..+| ++++
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~--~~~~~i~~~~ip----------dglp 79 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN--EFLPNIKYYNVH----------DGLP 79 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS--CCCTTEEEEECC----------CCCC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc--cCCCCceEEecC----------CCCC
Confidence 367999999999999999999999999999 99999998866555543211 113579999998 8888
Q ss_pred CCCccCCCCChhhHHHHHHHHhhhhhHHHHHHHh--CCCcEEEEcCCcchHHHHHHHcCCCeEEEecchhHHHHHHhchh
Q 036520 81 EGAEATVDIPSENIQYLKIAYDLLQHPFKQFVAQ--QSVDWIIVDVMSHWAGKIAQEYHVPLLLFSAFSAAAFQFIANPE 158 (473)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 158 (473)
.+.+...+.......++......+.+.+.+++++ .++||||+|.+..|+..+|+++|||++.|++++++.+..+.+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~ 159 (454)
T 3hbf_A 80 KGYVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTD 159 (454)
T ss_dssp TTCCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHH
T ss_pred CCccccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhH
Confidence 7765544322222223333333345555555554 47899999999999999999999999999999999988776655
Q ss_pred hhhcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhccccEEEEcCCchhhhHH
Q 036520 159 CLVGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILHSCQAMAIRSCPEFEGEY 238 (473)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~ 238 (473)
.+....... ... ...+..++|+. ..++..+++.++.. ........+..+......+.+++++||+++||+++
T Consensus 160 ~~~~~~~~~-~~~---~~~~~~~iPg~--p~~~~~dlp~~~~~--~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~ 231 (454)
T 3hbf_A 160 LIREKTGSK-EVH---DVKSIDVLPGF--PELKASDLPEGVIK--DIDVPFATMLHKMGLELPRANAVAINSFATIHPLI 231 (454)
T ss_dssp HHHHTCCHH-HHT---TSSCBCCSTTS--CCBCGGGSCTTSSS--CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHH
T ss_pred HHHhhcCCC-ccc---cccccccCCCC--CCcChhhCchhhcc--CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHH
Confidence 433221000 000 01122234432 23555565554321 11122335566667778889999999999999999
Q ss_pred HHHHHhhcCCCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEE
Q 036520 239 LNLLEKLTGKPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWA 318 (473)
Q Consensus 239 ~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 318 (473)
++.+++.+ +++++|||++....... ...++++.+||+.++++++|||||||+...+.+++.+++.+|++.+++|||+
T Consensus 232 ~~~~~~~~-~~v~~vGPl~~~~~~~~--~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~ 308 (454)
T 3hbf_A 232 ENELNSKF-KLLLNVGPFNLTTPQRK--VSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWS 308 (454)
T ss_dssp HHHHHTTS-SCEEECCCHHHHSCCSC--CCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEE
T ss_pred HHHHHhcC-CCEEEECCccccccccc--ccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEE
Confidence 99998776 58999999986433211 2235679999999888899999999999988999999999999999999999
Q ss_pred EcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCCceecccccccccccee
Q 036520 319 LRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLIIDQPLNAR 398 (473)
Q Consensus 319 ~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 398 (473)
++.. ....+|+++.++.+ +|+++.+|+||.++|+|+++++|||||||||++||+++|||||++|+++||+.||+
T Consensus 309 ~~~~-----~~~~lp~~~~~~~~-~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~ 382 (454)
T 3hbf_A 309 FRGD-----PKEKLPKGFLERTK-TKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTI 382 (454)
T ss_dssp CCSC-----HHHHSCTTHHHHTT-TTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred eCCc-----chhcCCHhHHhhcC-CceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHH
Confidence 9864 23457777776654 57888899999999999999999999999999999999999999999999999999
Q ss_pred eeeec-ceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhc----cCCCcHHHHHHHHHHHH
Q 036520 399 LLVDK-DLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFN----DKKLHDDYSVRFVEYLK 467 (473)
Q Consensus 399 ~v~~~-G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~~~~~~~ 467 (473)
++++. |+|+.++.. .+++++|.++|+++|++++..+||+||+++++.++ +.|++..+++.+++.+.
T Consensus 383 ~v~~~~g~Gv~l~~~---~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 383 LTESVLEIGVGVDNG---VLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHHTTSCSEEECGGG---SCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HHHHhhCeeEEecCC---CCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 99995 999999875 89999999999999995434589999999999976 45677889999998874
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.7e-59 Score=471.91 Aligned_cols=439 Identities=25% Similarity=0.372 Sum_probs=315.2
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhC-CCeEEEEeCCCc--cccCCCCCCCcccCCCeEEEEecCCccccccccCCC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKS-GVKVSFISTPKN--IQRLPKPAPESEVAALINFVEFPLPASAALDDKLLL 79 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~-Gh~Vt~~~~~~~--~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l 79 (473)
+++||+++|++++||++|+++||++|++| ||+|||++++.. ...+.... .....+++|+.++... +
T Consensus 5 ~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~--~~~~~~i~~~~l~~~~---------~ 73 (480)
T 2vch_A 5 KTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVL--DSLPSSISSVFLPPVD---------L 73 (480)
T ss_dssp -CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHH--C-CCTTEEEEECCCCC---------C
T ss_pred CCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhc--cccCCCceEEEcCCCC---------C
Confidence 45899999999999999999999999998 999999998773 22221100 0002489999987321 1
Q ss_pred CCCCccCCCCChhhHHHHHHHHhhhhhHHHHHHHh----CCC-cEEEEcCCcchHHHHHHHcCCCeEEEecchhHHHHHH
Q 036520 80 PEGAEATVDIPSENIQYLKIAYDLLQHPFKQFVAQ----QSV-DWIIVDVMSHWAGKIAQEYHVPLLLFSAFSAAAFQFI 154 (473)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~----~~p-D~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 154 (473)
+ +.. . .......+......+.+.+.+++++ .++ ||||+|.+..|+..+|+++|||++.++++++.....+
T Consensus 74 ~-~~~---~-~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~ 148 (480)
T 2vch_A 74 T-DLS---S-STRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFF 148 (480)
T ss_dssp T-TSC---T-TCCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHH
T ss_pred C-CCC---C-chhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHH
Confidence 1 110 0 1122233434455566777787776 378 9999999988999999999999999999998766554
Q ss_pred hchhhhhcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhccccEEEEcCCchh
Q 036520 155 ANPECLVGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILHSCQAMAIRSCPEF 234 (473)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 234 (473)
.+...+......++.. .++....+.+ ..++..+++..+ .......+....+....+++..++++|++.++
T Consensus 149 ~~~~~~~~~~~~~~~~-~~~~~~~Pg~------~p~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~el 218 (480)
T 2vch_A 149 LHLPKLDETVSCEFRE-LTEPLMLPGC------VPVAGKDFLDPA---QDRKDDAYKWLLHNTKRYKEAEGILVNTFFEL 218 (480)
T ss_dssp HHHHHHHHHCCSCGGG-CSSCBCCTTC------CCBCGGGSCGGG---SCTTSHHHHHHHHHHHHGGGCSEEEESCCTTT
T ss_pred HHHHHHHhcCCCcccc-cCCcccCCCC------CCCChHHCchhh---hcCCchHHHHHHHHHHhcccCCEEEEcCHHHH
Confidence 4332111111000000 0000111111 112222222221 11111122333344455667788999999999
Q ss_pred hhHHHHHHHhhc--CCCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhcCC
Q 036520 235 EGEYLNLLEKLT--GKPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLELSG 312 (473)
Q Consensus 235 e~~~~~~~~~~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~ 312 (473)
++++...+.+.. .+++++|||+........ ....++++.+||++++++++|||||||+...+.+++.+++.+|+.++
T Consensus 219 e~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~-~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~ 297 (480)
T 2vch_A 219 EPNAIKALQEPGLDKPPVYPVGPLVNIGKQEA-KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSE 297 (480)
T ss_dssp SHHHHHHHHSCCTTCCCEEECCCCCCCSCSCC------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHhcccCCCcEEEEecccccccccc-CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcC
Confidence 998777776421 257999999986532210 01235679999999887889999999999888999999999999999
Q ss_pred CCEEEEEcCCCCC----------CCc-cccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhC
Q 036520 313 LPFLWALRKPEWA----------TDD-VDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFG 381 (473)
Q Consensus 313 ~~~i~~~~~~~~~----------~~~-~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~G 381 (473)
++|||+++..... .+. ...+|+++.++.++.++++.+|+||.+||+|+++++|||||||||++||+++|
T Consensus 298 ~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~G 377 (480)
T 2vch_A 298 QRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSG 377 (480)
T ss_dssp CEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHT
T ss_pred CcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcC
Confidence 9999999865310 001 13588888888888888887899999999999999999999999999999999
Q ss_pred Cceeccccccccccceeee-eecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhcc---CCC-cH
Q 036520 382 HSLVVLPLIIDQPLNARLL-VDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFND---KKL-HD 456 (473)
Q Consensus 382 vP~l~~P~~~DQ~~na~~v-~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~---~~~-~~ 456 (473)
||||++|+++||+.||+++ +++|+|+.++..+++.+|+++|+++|+++|+++++++||+||+++++.+++ .+| +.
T Consensus 378 vP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~ 457 (480)
T 2vch_A 378 IPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTST 457 (480)
T ss_dssp CCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHH
T ss_pred CCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 9999999999999999997 788999999764334799999999999999877778999999999998875 555 47
Q ss_pred HHHHHHHHHHHH
Q 036520 457 DYSVRFVEYLKI 468 (473)
Q Consensus 457 ~~~~~~~~~~~~ 468 (473)
.+++.+++.++.
T Consensus 458 ~~~~~~v~~~~~ 469 (480)
T 2vch_A 458 KALSLVALKWKA 469 (480)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 788999988764
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=3.7e-60 Score=478.52 Aligned_cols=448 Identities=22% Similarity=0.388 Sum_probs=313.8
Q ss_pred CCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCc--ccCCCeEEEEecCCccccccccCCC
Q 036520 2 ARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPES--EVAALINFVEFPLPASAALDDKLLL 79 (473)
Q Consensus 2 ~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~--~~~~~i~~~~i~~~~~~~~~~~~~l 79 (473)
.+++||+++|++++||++|++.||++|++|||+|||++++.+...+.+..... ...++++++.++ +++
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~----------~~l 75 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP----------DGL 75 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC----------CCC
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC----------CCC
Confidence 34579999999999999999999999999999999999887765443321000 001379999998 555
Q ss_pred CCCCccCCCCChhhHHHHHHHHhhhhhHHHHHHHh-------CCCcEEEEcCCcchHHHHHHHcCCCeEEEecchhHHHH
Q 036520 80 PEGAEATVDIPSENIQYLKIAYDLLQHPFKQFVAQ-------QSVDWIIVDVMSHWAGKIAQEYHVPLLLFSAFSAAAFQ 152 (473)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~-------~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~ 152 (473)
+...... ....+...++......+.+.+.+++++ .+|||||+|.+..|+..+|+++|||++.++++++....
T Consensus 76 p~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~ 154 (482)
T 2pq6_A 76 TPMEGDG-DVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLL 154 (482)
T ss_dssp C----------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHH
T ss_pred CCccccc-CcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHH
Confidence 4411000 111223333333334566667777663 47999999999999999999999999999999987766
Q ss_pred HHhchhhhhcCCCCCCCCCC---cc-ccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhccccEEEE
Q 036520 153 FIANPECLVGDGQKRVRPSA---ES-LTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILHSCQAMAI 228 (473)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (473)
...+...+...++.+..... .. ......++|. ...++..+++.+... ...................+.+++++
T Consensus 155 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vl~ 231 (482)
T 2pq6_A 155 NVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPG--LKNFRLKDIVDFIRT-TNPNDIMLEFFIEVADRVNKDTTILL 231 (482)
T ss_dssp HHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTT--CCSCBGGGSCGGGCC-SCTTCHHHHHHHHHHHTCCTTCCEEE
T ss_pred HHHHHHHHHhcCCCCCccccccccccccCccccCCC--CCCCchHHCchhhcc-CCcccHHHHHHHHHHHhhccCCEEEE
Confidence 54433323323332211100 00 0001111111 111222333222210 00011112233344556677899999
Q ss_pred cCCchhhhHHHHHHHhhcCCCeEEeeccCCC-CCC-------C--CCCCCchhhhhccccCCCCCcEEEEeecCcccCCH
Q 036520 229 RSCPEFEGEYLNLLEKLTGKPVIPVGLLTPE-PNS-------A--KGRDHQISKIFQWLDEQKPRSVVFVGFGSECKLSK 298 (473)
Q Consensus 229 ~s~~~le~~~~~~~~~~~~~~~~~vGp~~~~-~~~-------~--~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~ 298 (473)
|++++||+++++.+++.+ +++++|||++.. ... . ......+.++.+||++++++++|||||||+...+.
T Consensus 232 nt~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~ 310 (482)
T 2pq6_A 232 NTFNELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTP 310 (482)
T ss_dssp SSCGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCH
T ss_pred cChHHHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCH
Confidence 999999999999998877 789999999753 111 0 00012345689999998888899999999988888
Q ss_pred HHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHH
Q 036520 299 DQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETL 378 (473)
Q Consensus 299 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal 378 (473)
+++.+++.+|+..+++|+|+++..... .....+|+++.++. .+|+++.+|+||.++|+|+++++|||||||||++||+
T Consensus 311 ~~~~~~~~~l~~~~~~~l~~~~~~~~~-~~~~~l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal 388 (482)
T 2pq6_A 311 EQLLEFAWGLANCKKSFLWIIRPDLVI-GGSVIFSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESI 388 (482)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCGGGST-TTGGGSCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcEEEEEcCCccc-cccccCcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHH
Confidence 889999999999999999999754211 01123677776665 4588999999999999999999999999999999999
Q ss_pred hhCCceeccccccccccceeeee-ecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhcc----CC
Q 036520 379 QFGHSLVVLPLIIDQPLNARLLV-DKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFND----KK 453 (473)
Q Consensus 379 ~~GvP~l~~P~~~DQ~~na~~v~-~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~----~~ 453 (473)
++|||+|++|+++||+.||++++ +.|+|+.++ . .+++++|.++|+++|++++..+||+||+++++.+++ .|
T Consensus 389 ~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~---~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gG 464 (482)
T 2pq6_A 389 CAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-T---NVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGG 464 (482)
T ss_dssp HHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-S---SCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred HcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-C---CCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999997 789999998 5 799999999999999932222799999999999874 46
Q ss_pred CcHHHHHHHHHHHHHhc
Q 036520 454 LHDDYSVRFVEYLKINV 470 (473)
Q Consensus 454 ~~~~~~~~~~~~~~~~~ 470 (473)
++..+++.+++.+..++
T Consensus 465 ss~~~l~~~v~~~~~~~ 481 (482)
T 2pq6_A 465 CSYMNLNKVIKDVLLKQ 481 (482)
T ss_dssp HHHHHHHHHHHHTTCC-
T ss_pred cHHHHHHHHHHHHHhcC
Confidence 67899999999886543
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.1e-57 Score=453.81 Aligned_cols=436 Identities=25% Similarity=0.357 Sum_probs=306.2
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCCCe--EEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSGVK--VSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLP 80 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~--Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~ 80 (473)
+++||+++|++++||++|+++||++|++|||. |||++++.....+..... ....++++++.++ ++++
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~-~~~~~~i~~~~i~----------~glp 74 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSM-HTMQCNIKSYDIS----------DGVP 74 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC--------CTTEEEEECC----------CCCC
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhcccc-ccCCCceEEEeCC----------CCCC
Confidence 45799999999999999999999999999755 577887654333222110 0012479999887 6666
Q ss_pred CCCccCCCCChhhHHHHHHHH-hhhhhHHHHHHHh--CCCcEEEEcCCcchHHHHHHHcCCCeEEEecchhHHHHHHhch
Q 036520 81 EGAEATVDIPSENIQYLKIAY-DLLQHPFKQFVAQ--QSVDWIIVDVMSHWAGKIAQEYHVPLLLFSAFSAAAFQFIANP 157 (473)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ll~~--~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 157 (473)
.+.+.. .........+.... ..+.+.+.+++++ .+|||||+|.+..|+..+|+++|||++.++++++.......+.
T Consensus 75 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~ 153 (456)
T 2c1x_A 75 EGYVFA-GRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYI 153 (456)
T ss_dssp TTCCCC-CCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTH
T ss_pred Cccccc-CChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhh
Confidence 543221 12222222222222 2233334444433 5899999999988999999999999999999988766544322
Q ss_pred hhhhcC-CCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCch-hhHHHHHHhhccccEEEEcCCchhh
Q 036520 158 ECLVGD-GQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGI-TDAHRTAEILHSCQAMAIRSCPEFE 235 (473)
Q Consensus 158 ~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~le 235 (473)
..+... +.. ...........++|... .++..+++..+. .......+ ....+......+.+++++|+++++|
T Consensus 154 ~~~~~~~~~~---~~~~~~~~~~~~~pg~~--~~~~~~lp~~~~--~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le 226 (456)
T 2c1x_A 154 DEIREKIGVS---GIQGREDELLNFIPGMS--KVRFRDLQEGIV--FGNLNSLFSRMLHRMGQVLPKATAVFINSFEELD 226 (456)
T ss_dssp HHHHHHHCSS---CCTTCTTCBCTTSTTCT--TCBGGGSCTTTS--SSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGC
T ss_pred HHHHhccCCc---ccccccccccccCCCCC--cccHHhCchhhc--CCCcccHHHHHHHHHHHhhhhCCEEEECChHHHh
Confidence 111100 100 00000011112233221 234444433210 01111111 2333444455778999999999999
Q ss_pred hHHHHHHHhhcCCCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhcCCCCE
Q 036520 236 GEYLNLLEKLTGKPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLELSGLPF 315 (473)
Q Consensus 236 ~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~ 315 (473)
+++++.+++.+ +++++|||+........ ...+.++.+|++.++++++|||||||+...+.+++.+++.+++..+++|
T Consensus 227 ~~~~~~~~~~~-~~~~~vGpl~~~~~~~~--~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~ 303 (456)
T 2c1x_A 227 DSLTNDLKSKL-KTYLNIGPFNLITPPPV--VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPF 303 (456)
T ss_dssp HHHHHHHHHHS-SCEEECCCHHHHC-----------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHhcC-CCEEEecCcccCccccc--ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeE
Confidence 99888888876 57999999975432110 1123468899998878889999999999888899999999999999999
Q ss_pred EEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCCceecccccccccc
Q 036520 316 LWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLIIDQPL 395 (473)
Q Consensus 316 i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~~DQ~~ 395 (473)
+|+++.. ....+|+++.++. .+|+++.+|+||.++|+|+++++|||||||||++||+++|||+|++|+++||+.
T Consensus 304 lw~~~~~-----~~~~l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~ 377 (456)
T 2c1x_A 304 IWSLRDK-----ARVHLPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRL 377 (456)
T ss_dssp EEECCGG-----GGGGSCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred EEEECCc-----chhhCCHHHHhhc-CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHH
Confidence 9999754 1234676666554 358888899999999999999999999999999999999999999999999999
Q ss_pred ceeeeeec-ceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhcc----CCCcHHHHHHHHHHHHHh
Q 036520 396 NARLLVDK-DLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFND----KKLHDDYSVRFVEYLKIN 469 (473)
Q Consensus 396 na~~v~~~-G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 469 (473)
||+++++. |+|+.++.. .+++++|.++|+++|++++.++||+||+++++.+++ +|++..+++.+++.+...
T Consensus 378 Na~~l~~~~g~g~~l~~~---~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~~ 453 (456)
T 2c1x_A 378 NGRMVEDVLEIGVRIEGG---VFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKP 453 (456)
T ss_dssp HHHHHHHTSCCEEECGGG---SCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHhCeEEEecCC---CcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHhc
Confidence 99999999 999999865 799999999999999843234899999999999863 466788999999988543
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.5e-56 Score=448.94 Aligned_cols=433 Identities=20% Similarity=0.291 Sum_probs=309.5
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCcccc-CCCCCCC-cccCCCeEEEEecCCccccccccCC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKS--GVKVSFISTPKNIQR-LPKPAPE-SEVAALINFVEFPLPASAALDDKLL 78 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~~~~~-~~~~~~~-~~~~~~i~~~~i~~~~~~~~~~~~~ 78 (473)
+++||+++|++++||++|+++||+.|+++ ||+|||++++.+.+. +...... .....+++|+.+| ++
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp----------~~ 77 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLP----------EV 77 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECC----------CC
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECC----------CC
Confidence 35799999999999999999999999999 999999998875321 1000000 0112489999988 33
Q ss_pred -CCCCCccCCCCChhhHHHHHHHHhhhhhHHHHHHHh---CCCcEEEEcCCcchHHHHHHHcCCCeEEEecchhHHHHHH
Q 036520 79 -LPEGAEATVDIPSENIQYLKIAYDLLQHPFKQFVAQ---QSVDWIIVDVMSHWAGKIAQEYHVPLLLFSAFSAAAFQFI 154 (473)
Q Consensus 79 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~---~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 154 (473)
++. .+... ..+.. +......+.+.+.+++++ .+|||||+|.+..|+..+|+++|||++.++++++..+..+
T Consensus 78 ~~~~-~~~~~--~~~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~ 152 (463)
T 2acv_A 78 EPPP-QELLK--SPEFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLM 152 (463)
T ss_dssp CCCC-GGGGG--SHHHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHH
T ss_pred CCCc-ccccC--CccHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHH
Confidence 221 11011 11111 444555667778888877 6899999999999999999999999999999998876655
Q ss_pred hchhhhhcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhccccEEEEcCCchh
Q 036520 155 ANPECLVGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILHSCQAMAIRSCPEF 234 (473)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 234 (473)
.+...+...+ ++.. ... ...+..+|... ..++..+++..+ ..+ ...+....+........+++++|+++++
T Consensus 153 ~~~~~~~~~~--~~~~-~~~-~~~~~~~pg~~-~~~~~~~l~~~~---~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~el 223 (463)
T 2acv_A 153 LSLKNRQIEE--VFDD-SDR-DHQLLNIPGIS-NQVPSNVLPDAC---FNK-DGGYIAYYKLAERFRDTKGIIVNTFSDL 223 (463)
T ss_dssp HHGGGSCTTC--CCCC-SSG-GGCEECCTTCS-SCEEGGGSCHHH---HCT-TTHHHHHHHHHHHHTTSSEEEESCCHHH
T ss_pred HHHHhhcccC--CCCC-ccc-cCceeECCCCC-CCCChHHCchhh---cCC-chHHHHHHHHHHhcccCCEEEECCHHHH
Confidence 4333111000 0000 000 00011122110 122222322211 111 1223333344455677889999999999
Q ss_pred hhHHHHHHHhhc--CCCeEEeeccCCCCC-CC-CCCCCchhhhhccccCCCCCcEEEEeecCcc-cCCHHHHHHHHHHHh
Q 036520 235 EGEYLNLLEKLT--GKPVIPVGLLTPEPN-SA-KGRDHQISKIFQWLDEQKPRSVVFVGFGSEC-KLSKDQVYEIAYGLE 309 (473)
Q Consensus 235 e~~~~~~~~~~~--~~~~~~vGp~~~~~~-~~-~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~-~~~~~~~~~~~~al~ 309 (473)
|+++.+.+.+.. ++++++|||+..... .. ......++++.+||+.++++++|||||||+. ..+.+++.+++.+|+
T Consensus 224 e~~~~~~l~~~~~p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~ 303 (463)
T 2acv_A 224 EQSSIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLK 303 (463)
T ss_dssp HHHHHHHHHHHCTTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHhccccCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHH
Confidence 998887777655 578999999986542 10 0000235689999999888889999999999 788889999999999
Q ss_pred cCCCCEEEEEcCCCCCCCccccCchhhhhhcC-CCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCCceeccc
Q 036520 310 LSGLPFLWALRKPEWATDDVDALPLGFADTIR-GKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLP 388 (473)
Q Consensus 310 ~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~-~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P 388 (473)
+.+++|||+++.+ ...+|+++.++.. .+|+++.+|+||.++|+|+++++|||||||||++||+++|||+|++|
T Consensus 304 ~~~~~~l~~~~~~------~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P 377 (463)
T 2acv_A 304 HSGVRFLWSNSAE------KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWP 377 (463)
T ss_dssp HHTCEEEEECCCC------GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECC
T ss_pred hCCCcEEEEECCC------cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeecc
Confidence 9999999999753 1235666655441 34778889999999999999999999999999999999999999999
Q ss_pred cccccccceeee-eecceEEEE-ecCCCC--CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhcc----CCCcHHHHH
Q 036520 389 LIIDQPLNARLL-VDKDLAVQV-ERKDDG--SFTRDGIAKALRLATVSEEGEKLRVRAREAANTFND----KKLHDDYSV 460 (473)
Q Consensus 389 ~~~DQ~~na~~v-~~~G~G~~l-~~~~~~--~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~----~~~~~~~~~ 460 (473)
+++||+.||+++ ++.|+|+.+ +..+.+ .+++++|.++|+++|++ +++||+||+++++.+++ .|++..+++
T Consensus 378 ~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~--~~~~r~~a~~l~~~~~~a~~~gGss~~~l~ 455 (463)
T 2acv_A 378 IYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDK--DSIVHKKVQEMKEMSRNAVVDGGSSLISVG 455 (463)
T ss_dssp CSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCT--TCTHHHHHHHHHHHHHHHTSTTSHHHHHHH
T ss_pred chhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 999999999995 899999998 321123 68999999999999962 36899999999998764 556788999
Q ss_pred HHHHHHH
Q 036520 461 RFVEYLK 467 (473)
Q Consensus 461 ~~~~~~~ 467 (473)
.|+++++
T Consensus 456 ~~v~~~~ 462 (463)
T 2acv_A 456 KLIDDIT 462 (463)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9998874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=7.9e-47 Score=376.71 Aligned_cols=401 Identities=17% Similarity=0.197 Sum_probs=277.0
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEG 82 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~ 82 (473)
++|||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+.. .++++++++ .+++.+
T Consensus 11 ~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~--------~g~~~~~~~----------~~~~~~ 72 (424)
T 2iya_A 11 TPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA--------AGATPVVYD----------SILPKE 72 (424)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH--------HTCEEEECC----------CCSCCT
T ss_pred ccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh--------CCCEEEecC----------cccccc
Confidence 35799999999999999999999999999999999999887665544 377888876 333222
Q ss_pred Ccc---CCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCcchHHHHHHHcCCCeEEEecchhHHHHHHhchhh
Q 036520 83 AEA---TVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMSHWAGKIAQEYHVPLLLFSAFSAAAFQFIANPEC 159 (473)
Q Consensus 83 ~~~---~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 159 (473)
... ...........+........+.+.+++++.+||+||+|.+.+++..+|+++|||++.+++.+.........+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~ 152 (424)
T 2iya_A 73 SNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPA 152 (424)
T ss_dssp TCTTCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGG
T ss_pred ccchhhcchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccc
Confidence 111 01111122222333344566778888888999999999988899999999999999998776421111000000
Q ss_pred hhcCCCCCCCCCCccccCCCccccCCCcc-----cccc--ccccccccccccCCCCchhhHHHHHHhhccccEEEEcCCc
Q 036520 160 LVGDGQKRVRPSAESLTSVPEWVDFPSSV-----ALRT--FDAIGMHHGFYGMNASGITDAHRTAEILHSCQAMAIRSCP 232 (473)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 232 (473)
.. .+.. .....+.++......... .+.. ..+..+. ... +.. ..........+.+++++++
T Consensus 153 ~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--g~~--~~~~~~~~~~~~~l~~~~~ 219 (424)
T 2iya_A 153 VQ-DPTA----DRGEEAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFL----EEH--GVD--TPATEFLIAPNRCIVALPR 219 (424)
T ss_dssp GS-CCCC-------------------------HHHHHHHHHHHHHHH----HHT--TCC--SCHHHHHHCCSSEEESSCT
T ss_pred cc-cccc----ccccccccccccccchhhhccchhHHHHHHHHHHHH----HHc--CCC--CCHHHhccCCCcEEEEcch
Confidence 00 0000 000000000000000000 0000 0000000 000 000 0011122256788999999
Q ss_pred hhhhHHHHHHHhhcCCCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhcCC
Q 036520 233 EFEGEYLNLLEKLTGKPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLELSG 312 (473)
Q Consensus 233 ~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~ 312 (473)
+++++ ...+++++++|||+.... .+..+|++..+++++|||++||......+.+..+++++++.+
T Consensus 220 ~l~~~-----~~~~~~~~~~vGp~~~~~----------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~ 284 (424)
T 2iya_A 220 TFQIK-----GDTVGDNYTFVGPTYGDR----------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLD 284 (424)
T ss_dssp TTSTT-----GGGCCTTEEECCCCCCCC----------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCS
T ss_pred hhCCC-----ccCCCCCEEEeCCCCCCc----------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCC
Confidence 99864 245778899999975321 123467776556779999999998666788889999999888
Q ss_pred CCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCCceeccccccc
Q 036520 313 LPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLIID 392 (473)
Q Consensus 313 ~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~~D 392 (473)
.+++|.++..... +....+| +|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|.+.|
T Consensus 285 ~~~~~~~g~~~~~-~~~~~~~---------~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~d 352 (424)
T 2iya_A 285 WHVVLSVGRFVDP-ADLGEVP---------PNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAE 352 (424)
T ss_dssp SEEEEECCTTSCG-GGGCSCC---------TTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHH
T ss_pred cEEEEEECCcCCh-HHhccCC---------CCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccc
Confidence 9999988754211 0111233 39999999999999999998 9999999999999999999999999999
Q ss_pred cccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHH
Q 036520 393 QPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFVEYLK 467 (473)
Q Consensus 393 Q~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (473)
|+.||+++++.|+|+.+... .++.++|.++|+++++ +++++++++++++.+++.++.+.+++.+.+.+.
T Consensus 353 Q~~na~~l~~~g~g~~~~~~---~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 353 QTMNAERIVELGLGRHIPRD---QVTAEKLREAVLAVAS---DPGVAERLAAVRQEIREAGGARAAADILEGILA 421 (424)
T ss_dssp HHHHHHHHHHTTSEEECCGG---GCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHCCCEEEcCcC---CCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 99999999999999999876 7899999999999999 899999999999999888887888777766654
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=9.3e-48 Score=380.54 Aligned_cols=371 Identities=14% Similarity=0.095 Sum_probs=243.4
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEG 82 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~ 82 (473)
++|||||+++|+.||++|+++||++|++|||+|||++++.+...... ++.+..+.................
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 91 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAEA---------GLCAVDVSPGVNYAKLFVPDDTDV 91 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHTT---------TCEEEESSTTCCSHHHHSCCC---
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHhc---------CCeeEecCCchhHhhhcccccccc
Confidence 56999999999999999999999999999999999998877654432 666766641110000000000000
Q ss_pred Ccc---CCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCcchHHHHHHHcCCCeEEEecchhHHHHHHhchhh
Q 036520 83 AEA---TVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMSHWAGKIAQEYHVPLLLFSAFSAAAFQFIANPEC 159 (473)
Q Consensus 83 ~~~---~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 159 (473)
... ...........+........+.+.+++++++||+||+|.+.+++..+|+.+|||++.+...+...........
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~~- 170 (400)
T 4amg_A 92 TDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGALI- 170 (400)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHHH-
T ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhhHH-
Confidence 000 0001111222233334445667778889999999999999999999999999999987654332111100000
Q ss_pred hhcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhc-cccEEEEcCCchhhhHH
Q 036520 160 LVGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILH-SCQAMAIRSCPEFEGEY 238 (473)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~le~~~ 238 (473)
...+. ....+...... .....+..........
T Consensus 171 ------------------------------------~~~l~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 203 (400)
T 4amg_A 171 ------------------------------------RRAMS----------KDYERHGVTGEPTGSVRLTTTPPSVEAL- 203 (400)
T ss_dssp ------------------------------------HHHTH----------HHHHHTTCCCCCSCEEEEECCCHHHHHT-
T ss_pred ------------------------------------HHHHH----------HHHHHhCCCcccccchhhcccCchhhcc-
Confidence 00000 00000000000 0111111111111100
Q ss_pred HHHHHhhcCCCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcccCC--HHHHHHHHHHHhcCCCCEE
Q 036520 239 LNLLEKLTGKPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECKLS--KDQVYEIAYGLELSGLPFL 316 (473)
Q Consensus 239 ~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~--~~~~~~~~~al~~~~~~~i 316 (473)
.......+....+.+.... ....+.+|++..+++++|||||||+.... .+.+..++++++..+.+++
T Consensus 204 --~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v 272 (400)
T 4amg_A 204 --LPEDRRSPGAWPMRYVPYN---------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFV 272 (400)
T ss_dssp --SCGGGCCTTCEECCCCCCC---------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEE
T ss_pred --CcccccCCcccCccccccc---------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEE
Confidence 0000011223333322211 12345678888888899999999987643 3678889999999999999
Q ss_pred EEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCCceeccccccccccc
Q 036520 317 WALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLIIDQPLN 396 (473)
Q Consensus 317 ~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~~DQ~~n 396 (473)
|..++.... ....+|+ |+++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|+++||+.|
T Consensus 273 ~~~~~~~~~--~~~~~~~---------~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~n 339 (400)
T 4amg_A 273 LTLGGGDLA--LLGELPA---------NVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTN 339 (400)
T ss_dssp EECCTTCCC--CCCCCCT---------TEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHH
T ss_pred EEecCcccc--ccccCCC---------CEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHH
Confidence 998765432 3345565 9999999999999999988 99999999999999999999999999999999
Q ss_pred eeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHHH
Q 036520 397 ARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFVE 464 (473)
Q Consensus 397 a~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 464 (473)
|+++++.|+|+.++.. .++++ +|+++|+ |++||+||+++++.+++.++..++++.+++
T Consensus 340 a~~v~~~G~g~~l~~~---~~~~~----al~~lL~---d~~~r~~a~~l~~~~~~~~~~~~~a~~le~ 397 (400)
T 4amg_A 340 RDVLTGLGIGFDAEAG---SLGAE----QCRRLLD---DAGLREAALRVRQEMSEMPPPAETAAXLVA 397 (400)
T ss_dssp HHHHHHHTSEEECCTT---TCSHH----HHHHHHH---CHHHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHCCCEEEcCCC---CchHH----HHHHHHc---CHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 9999999999999876 66654 6778999 899999999999999999988877776655
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2e-44 Score=358.16 Aligned_cols=377 Identities=14% Similarity=0.135 Sum_probs=255.9
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCCCc
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEGAE 84 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~~~ 84 (473)
|||+|++.++.||++|+++||++|+++||+|||++++.+.+.+.. .+++++.++.... +.+.
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~--------~g~~~~~i~~~~~------~~~~---- 62 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE--------VGVPHVPVGPSAR------APIQ---- 62 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH--------TTCCEEECCC-----------------
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH--------cCCeeeeCCCCHH------HHhh----
Confidence 799999999999999999999999999999999999886655443 3788888873211 1111
Q ss_pred cCCCCChhhHHHHHHHHhhh-hhHHHHHHH-hCCCcEEEEcC-Ccch--HHHHHHHcCCCeEEEecchhHHHHHHhchhh
Q 036520 85 ATVDIPSENIQYLKIAYDLL-QHPFKQFVA-QQSVDWIIVDV-MSHW--AGKIAQEYHVPLLLFSAFSAAAFQFIANPEC 159 (473)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~-~~~l~~ll~-~~~pD~vI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 159 (473)
....... ..+...+... .+.+.++.+ ..+||+||+|. +..+ +..+|+++|||++.+++++......
T Consensus 63 ~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~------ 133 (415)
T 1iir_A 63 RAKPLTA---EDVRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSP------ 133 (415)
T ss_dssp CCSCCCH---HHHHHHHHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCS------
T ss_pred cccccch---HHHHHHHHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCc------
Confidence 0011111 1122222222 233444443 57999999997 6678 8899999999999998876432000
Q ss_pred hhcCCCCCCCCCCccccCCCcccc--CCCcccccccccc-----c-----cc----cccccCCCCchhhHHHHHHhhccc
Q 036520 160 LVGDGQKRVRPSAESLTSVPEWVD--FPSSVALRTFDAI-----G-----MH----HGFYGMNASGITDAHRTAEILHSC 223 (473)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~-----~-----~~----~~~~~~~~~~~~~~~~~~~~~~~~ 223 (473)
+ . |+...+ .+.. +..+.. + ++ ......+ ++.......+.....
T Consensus 134 -----~---------~--p~~~~~~~~~~~---~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~ 192 (415)
T 1iir_A 134 -----Y---------Y--PPPPLGEPSTQD---TIDIPAQWERNNQSAYQRYGGLLNSHRDAI--GLPPVEDIFTFGYTD 192 (415)
T ss_dssp -----S---------S--CCCC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCCCCCCHHHHHHCS
T ss_pred -----c---------c--CCccCCccccch---HHHHHHHHHHHHHHHHHHhHHHHHHHHHHc--CCCCCCccccccCCC
Confidence 0 0 110000 0000 000000 0 00 0000000 000000011122233
Q ss_pred cEEEEcCCchhhh-HHHHHHHhhcCCCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcccCCHHHHH
Q 036520 224 QAMAIRSCPEFEG-EYLNLLEKLTGKPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECKLSKDQVY 302 (473)
Q Consensus 224 ~~~~~~s~~~le~-~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~ 302 (473)
.+++|+++.+++ + +..+ ++++|||+..+.. ...+.++.+|++..+ ++|||++||+. ...+.+.
T Consensus 193 -~~l~~~~~~l~~~~-----~~~~--~~~~vG~~~~~~~-----~~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~ 256 (415)
T 1iir_A 193 -HPWVAADPVLAPLQ-----PTDL--DAVQTGAWILPDE-----RPLSPELAAFLDAGP--PPVYLGFGSLG-APADAVR 256 (415)
T ss_dssp -SCEECSCTTTSCCC-----CCSS--CCEECCCCCCCCC-----CCCCHHHHHHHHTSS--CCEEEECC----CCHHHHH
T ss_pred -CEEEeeChhhcCCC-----cccC--CeEeeCCCccCcc-----cCCCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHHH
Confidence 688999998875 2 1222 6999999886532 123567889997654 59999999987 5677888
Q ss_pred HHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCC
Q 036520 303 EIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGH 382 (473)
Q Consensus 303 ~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~Gv 382 (473)
.+++++++.+.+++|+++..... ...+|+ |+++.+|+||.++|+++++ ||||||+||+.||+++||
T Consensus 257 ~~~~al~~~~~~~v~~~g~~~~~---~~~~~~---------~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~ 322 (415)
T 1iir_A 257 VAIDAIRAHGRRVILSRGWADLV---LPDDGA---------DCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGA 322 (415)
T ss_dssp HHHHHHHHTTCCEEECTTCTTCC---CSSCGG---------GEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTC
T ss_pred HHHHHHHHCCCeEEEEeCCCccc---ccCCCC---------CEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCC
Confidence 89999999999999988754221 122333 8999999999999987777 999999999999999999
Q ss_pred ceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHH
Q 036520 383 SLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRF 462 (473)
Q Consensus 383 P~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 462 (473)
|+|++|.+.||+.||+++++.|+|+.++.. .++.++|.++|+++ + +++++++++++++.++..++.+.+++.+
T Consensus 323 P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~---~~~~~~l~~~i~~l-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i 395 (415)
T 1iir_A 323 PQILLPQMADQPYYAGRVAELGVGVAHDGP---IPTFDSLSAALATA-L---TPETHARATAVAGTIRTDGAAVAARLLL 395 (415)
T ss_dssp CEEECCCSTTHHHHHHHHHHHTSEEECSSS---SCCHHHHHHHHHHH-T---SHHHHHHHHHHHHHSCSCHHHHHHHHHH
T ss_pred CEEECCCCCccHHHHHHHHHCCCcccCCcC---CCCHHHHHHHHHHH-c---CHHHHHHHHHHHHHHhhcChHHHHHHHH
Confidence 999999999999999999999999999876 78999999999999 8 8999999999999998766666665555
Q ss_pred HHHH
Q 036520 463 VEYL 466 (473)
Q Consensus 463 ~~~~ 466 (473)
.+.+
T Consensus 396 ~~~~ 399 (415)
T 1iir_A 396 DAVS 399 (415)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5444
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.1e-44 Score=358.18 Aligned_cols=380 Identities=14% Similarity=0.088 Sum_probs=258.8
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCCCc
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEGAE 84 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~~~ 84 (473)
|||++++.++.||++|+++||++|+++||+|+|++++.+.+.+.. .+++++.++.... +.+.. .
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~--------~g~~~~~~~~~~~------~~~~~-~- 64 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE--------VGVPHVPVGLPQH------MMLQE-G- 64 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH--------HTCCEEECSCCGG------GCCCT-T-
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH--------cCCeeeecCCCHH------HHHhh-c-
Confidence 799999999999999999999999999999999998876655444 3788888873211 11111 0
Q ss_pred cCCCCChhhHHHHHHHHhhhhhHHHHHHH--hCCCcEEEEcC-Ccch--HHHHHHHcCCCeEEEecchhHHHHHHhchhh
Q 036520 85 ATVDIPSENIQYLKIAYDLLQHPFKQFVA--QQSVDWIIVDV-MSHW--AGKIAQEYHVPLLLFSAFSAAAFQFIANPEC 159 (473)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~--~~~pD~vI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 159 (473)
...... ..+..........+.+.++ ..+||+||+|. +.++ +..+|+++|||++.+++++.....
T Consensus 65 -~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~------- 133 (416)
T 1rrv_A 65 -MPPPPP---EEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS------- 133 (416)
T ss_dssp -SCCCCH---HHHHHHHHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-------
T ss_pred -cccchh---HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC-------
Confidence 001111 0112222222122223333 56899999996 4567 889999999999998876533100
Q ss_pred hhcCCCCCCCCCCccccCCCccccC-CCcccccccccc-----c---------cccccccCCCCchhhHHHHHHhhcccc
Q 036520 160 LVGDGQKRVRPSAESLTSVPEWVDF-PSSVALRTFDAI-----G---------MHHGFYGMNASGITDAHRTAEILHSCQ 224 (473)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~-----~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (473)
...+ +....+. +. +..+.. . ........+ ++.......+.....
T Consensus 134 -------------~~~p-~~~~~~~~~~----r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~- 192 (416)
T 1rrv_A 134 -------------PHLP-PAYDEPTTPG----VTDIRVLWEERAARFADRYGPTLNRRRAEI--GLPPVEDVFGYGHGE- 192 (416)
T ss_dssp -------------SSSC-CCBCSCCCTT----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCCCCSCHHHHTTCS-
T ss_pred -------------cccC-CCCCCCCCch----HHHHHHHHHHHHHHHHHHhHHHHHHHHHHc--CCCCCCchhhhccCC-
Confidence 0000 0000000 00 000000 0 000000000 000000111222334
Q ss_pred EEEEcCCchhhhHHHHHHHhhcCCCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCccc-CCHHHHHH
Q 036520 225 AMAIRSCPEFEGEYLNLLEKLTGKPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECK-LSKDQVYE 303 (473)
Q Consensus 225 ~~~~~s~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~ 303 (473)
.++++++++++++ +..+ ++++|||+..+.. ...+.++.+|++..+ ++|||++||+.. ...+.+..
T Consensus 193 ~~l~~~~~~l~~~-----~~~~--~~~~vG~~~~~~~-----~~~~~~~~~~l~~~~--~~v~v~~Gs~~~~~~~~~~~~ 258 (416)
T 1rrv_A 193 RPLLAADPVLAPL-----QPDV--DAVQTGAWLLSDE-----RPLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKV 258 (416)
T ss_dssp SCEECSCTTTSCC-----CSSC--CCEECCCCCCCCC-----CCCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHH
T ss_pred CeEEccCccccCC-----CCCC--CeeeECCCccCcc-----CCCCHHHHHHHhcCC--CeEEEecCCCCccChHHHHHH
Confidence 7889999988863 1222 6999999886532 123567889997653 599999999864 34577888
Q ss_pred HHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCCc
Q 036520 304 IAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGHS 383 (473)
Q Consensus 304 ~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~GvP 383 (473)
+++++++.+.+++|+++..... ...+|+ |+.+.+|+||.++|+++++ ||||||+||++||+++|||
T Consensus 259 ~~~al~~~~~~~v~~~g~~~~~---~~~~~~---------~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P 324 (416)
T 1rrv_A 259 AVEAIRAQGRRVILSRGWTELV---LPDDRD---------DCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVP 324 (416)
T ss_dssp HHHHHHHTTCCEEEECTTTTCC---CSCCCT---------TEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCC
T ss_pred HHHHHHHCCCeEEEEeCCcccc---ccCCCC---------CEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCC
Confidence 9999999999999998764221 122333 8999999999999988888 9999999999999999999
Q ss_pred eeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHH
Q 036520 384 LVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFV 463 (473)
Q Consensus 384 ~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 463 (473)
+|++|.+.||+.||+++++.|+|+.++.. .++.++|.++|+++ + |++|+++++++++.+.+.++. ++++.++
T Consensus 325 ~i~~p~~~dQ~~na~~l~~~g~g~~~~~~---~~~~~~l~~~i~~l-~---~~~~~~~~~~~~~~~~~~~~~-~~~~~i~ 396 (416)
T 1rrv_A 325 QLVIPRNTDQPYFAGRVAALGIGVAHDGP---TPTFESLSAALTTV-L---APETRARAEAVAGMVLTDGAA-AAADLVL 396 (416)
T ss_dssp EEECCCSBTHHHHHHHHHHHTSEEECSSS---CCCHHHHHHHHHHH-T---SHHHHHHHHHHTTTCCCCHHH-HHHHHHH
T ss_pred EEEccCCCCcHHHHHHHHHCCCccCCCCC---CCCHHHHHHHHHHh-h---CHHHHHHHHHHHHHHhhcCcH-HHHHHHH
Confidence 99999999999999999999999999876 78999999999999 8 899999999999999877777 6666652
Q ss_pred HHHHH
Q 036520 464 EYLKI 468 (473)
Q Consensus 464 ~~~~~ 468 (473)
+++..
T Consensus 397 e~~~~ 401 (416)
T 1rrv_A 397 AAVGR 401 (416)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 44433
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=6.2e-42 Score=340.43 Aligned_cols=389 Identities=14% Similarity=0.167 Sum_probs=271.8
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEG 82 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~ 82 (473)
+.|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.. .++.+..++. .++..
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~--------~G~~~~~~~~----------~~~~~ 80 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA--------AGATVVPYQS----------EIIDA 80 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH--------TTCEEEECCC----------STTTC
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh--------cCCEEEeccc----------ccccc
Confidence 35899999999999999999999999999999999998887776654 3788888873 22111
Q ss_pred Cc---cCCCCChhhHHH-HHHHHhhhhhHHHHHHHhCCCcEEEEc-CCcchHHHHHHHcCCCeEEEecchhHHHHHHhch
Q 036520 83 AE---ATVDIPSENIQY-LKIAYDLLQHPFKQFVAQQSVDWIIVD-VMSHWAGKIAQEYHVPLLLFSAFSAAAFQFIANP 157 (473)
Q Consensus 83 ~~---~~~~~~~~~~~~-~~~~~~~~~~~l~~ll~~~~pD~vI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 157 (473)
.. ............ +........+.+.+++++++||+||+| ...+++..+|+++|||++.+.+...........+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~ 160 (415)
T 3rsc_A 81 DAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSFSQ 160 (415)
T ss_dssp CHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCHHH
T ss_pred ccchhhccccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcccccc
Confidence 00 011111111122 333334456778888999999999999 7888899999999999998875432110000000
Q ss_pred hhhhcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhccc-cEEEEcCCchhhh
Q 036520 158 ECLVGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILHSC-QAMAIRSCPEFEG 236 (473)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~le~ 236 (473)
. +. +.+...... .+. ............. ++.. ......... +..+....+.+++
T Consensus 161 ~-~~-----------------~~~~~~~p~-~~~--~~~~~~~~~~~~~--g~~~--~~~~~~~~~~~~~l~~~~~~~~~ 215 (415)
T 3rsc_A 161 D-MV-----------------TLAGTIDPL-DLP--VFRDTLRDLLAEH--GLSR--SVVDCWNHVEQLNLVFVPKAFQI 215 (415)
T ss_dssp H-HH-----------------HHHTCCCGG-GCH--HHHHHHHHHHHHT--TCCC--CHHHHHTCCCSEEEESSCTTTST
T ss_pred c-cc-----------------cccccCChh-hHH--HHHHHHHHHHHHc--CCCC--ChhhhhcCCCCeEEEEcCcccCC
Confidence 0 00 000000000 000 0000000000000 0000 001112222 6677766666664
Q ss_pred HHHHHHHhhcCCCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEE
Q 036520 237 EYLNLLEKLTGKPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFL 316 (473)
Q Consensus 237 ~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i 316 (473)
.++.++.++.++||+.... .+..+|....+++++|||++||......+.+..+++++.+.+.+++
T Consensus 216 -----~~~~~~~~~~~vGp~~~~~----------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v 280 (415)
T 3rsc_A 216 -----AGDTFDDRFVFVGPCFDDR----------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVV 280 (415)
T ss_dssp -----TGGGCCTTEEECCCCCCCC----------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEE
T ss_pred -----CcccCCCceEEeCCCCCCc----------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEE
Confidence 3456677899999976432 1234566555567799999999987677888899999998888999
Q ss_pred EEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCCceeccccccccccc
Q 036520 317 WALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLIIDQPLN 396 (473)
Q Consensus 317 ~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~~DQ~~n 396 (473)
|.++..... +....++ +|+++.+|+|+.++|+++++ ||||||+||+.||+++|+|+|++|...||+.|
T Consensus 281 ~~~g~~~~~-~~l~~~~---------~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~ 348 (415)
T 3rsc_A 281 MTLGGQVDP-AALGDLP---------PNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPM 348 (415)
T ss_dssp EECTTTSCG-GGGCCCC---------TTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHH
T ss_pred EEeCCCCCh-HHhcCCC---------CcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHH
Confidence 988754221 1112233 39999999999999999988 99999999999999999999999999999999
Q ss_pred eeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHH
Q 036520 397 ARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFVEYLK 467 (473)
Q Consensus 397 a~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (473)
|+++++.|+|+.+... .++.++|.++|.++++ |++++++++++++.+.+.++.+++++.+.+.+.
T Consensus 349 a~~l~~~g~g~~~~~~---~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 349 ARRVDQLGLGAVLPGE---KADGDTLLAAVGAVAA---DPALLARVEAMRGHVRRAGGAARAADAVEAYLA 413 (415)
T ss_dssp HHHHHHHTCEEECCGG---GCCHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEcccC---CCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 9999999999999886 7899999999999999 899999999999999988888888888877664
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=6.9e-42 Score=338.32 Aligned_cols=380 Identities=14% Similarity=0.114 Sum_probs=259.0
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCCCc
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEGAE 84 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~~~ 84 (473)
|||+|++.++.||++|+++||++|+++||+|++++++.+.+.++.. ++.+..++.+.. .+. ..
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~--------g~~~~~l~~~~~-------~~~-~~- 63 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV--------GVPMVPVGRAVR-------AGA-RE- 63 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT--------TCCEEECSSCSS-------GGG-SC-
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc--------CCceeecCCCHH-------HHh-cc-
Confidence 7899999999999999999999999999999999998877776653 788888873221 000 00
Q ss_pred cCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCcchH---HHHHHHcCCCeEEEecchhHHHHHHhchhhhh
Q 036520 85 ATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMSHWA---GKIAQEYHVPLLLFSAFSAAAFQFIANPECLV 161 (473)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 161 (473)
...........+........+.+.++++ +||+||+|.....+ ..+|+.+|||++.+..++..........
T Consensus 64 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~---- 136 (404)
T 3h4t_A 64 -PGELPPGAAEVVTEVVAEWFDKVPAAIE--GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQA---- 136 (404)
T ss_dssp -TTCCCTTCGGGHHHHHHHHHHHHHHHHT--TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHH----
T ss_pred -ccCCHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHH----
Confidence 0000111112233333334444444443 79999999655444 6889999999998887665310000000
Q ss_pred cCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhccccEEEEcCCchhhhHHHHH
Q 036520 162 GDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILHSCQAMAIRSCPEFEGEYLNL 241 (473)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~ 241 (473)
.+ .......++ .+........... ++.......... ..+..+.+..+.+.+.
T Consensus 137 ------------------~~-~~~~~~~~~--~~~~~~~~~~~~l--gl~~~~~~~~~~-~~~~~l~~~~~~l~p~---- 188 (404)
T 3h4t_A 137 ------------------ER-DMYNQGADR--LFGDAVNSHRASI--GLPPVEHLYDYG-YTDQPWLAADPVLSPL---- 188 (404)
T ss_dssp ------------------HH-HHHHHHHHH--HHHHHHHHHHHHT--TCCCCCCHHHHH-HCSSCEECSCTTTSCC----
T ss_pred ------------------HH-HHHHHHHHH--HhHHHHHHHHHHc--CCCCCcchhhcc-ccCCeEEeeCcceeCC----
Confidence 00 000000000 0000000000000 000000000000 1223455666666543
Q ss_pred HHhhcCCCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcC
Q 036520 242 LEKLTGKPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRK 321 (473)
Q Consensus 242 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 321 (473)
+.++++++++|++..+.. ...++++.+|++.. +++|||++||+.. ..+.+..+++++++.+.+++|+.+.
T Consensus 189 --~~~~~~~~~~G~~~~~~~-----~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~ 258 (404)
T 3h4t_A 189 --RPTDLGTVQTGAWILPDQ-----RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGW 258 (404)
T ss_dssp --CTTCCSCCBCCCCCCCCC-----CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTT
T ss_pred --CCCCCCeEEeCccccCCC-----CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 345678899998765432 22456788898754 4599999999987 6788889999999999999999876
Q ss_pred CCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCCceeccccccccccceeeee
Q 036520 322 PEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLIIDQPLNARLLV 401 (473)
Q Consensus 322 ~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~ 401 (473)
.... ....+ +|+++.+|+||.++|+++++ ||||||+||+.||+++|+|+|++|++.||+.||++++
T Consensus 259 ~~~~---~~~~~---------~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~ 324 (404)
T 3h4t_A 259 AGLG---RIDEG---------DDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVA 324 (404)
T ss_dssp TTCC---CSSCC---------TTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH
T ss_pred cccc---cccCC---------CCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHH
Confidence 4321 11223 49999999999999998888 9999999999999999999999999999999999999
Q ss_pred ecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHH
Q 036520 402 DKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFVEYLKI 468 (473)
Q Consensus 402 ~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (473)
+.|+|+.+... .++.++|.++|+++++ ++|+++++++++.+.+ .+.+.+++.+++.+..
T Consensus 325 ~~G~g~~l~~~---~~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~ 383 (404)
T 3h4t_A 325 DLGVGVAHDGP---TPTVESLSAALATALT----PGIRARAAAVAGTIRT-DGTTVAAKLLLEAISR 383 (404)
T ss_dssp HHTSEEECSSS---SCCHHHHHHHHHHHTS----HHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHHC
T ss_pred HCCCEeccCcC---CCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHhh
Confidence 99999999876 7899999999999998 6899999999999998 7777887777776654
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=5.3e-41 Score=332.19 Aligned_cols=391 Identities=15% Similarity=0.177 Sum_probs=268.8
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCCCc
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEGAE 84 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~~~ 84 (473)
+||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.. .++.++.++.+.. .......
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~--------~G~~~~~~~~~~~-------~~~~~~~ 69 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA--------AGAEVVLYKSEFD-------TFHVPEV 69 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH--------TTCEEEECCCGGG-------TSSSSSS
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH--------cCCEEEecccccc-------ccccccc
Confidence 399999999999999999999999999999999998877766654 3788888873211 0000000
Q ss_pred cCCCCChhhHHH-HHHHHhhhhhHHHHHHHhCCCcEEEEc-CCcchHHHHHHHcCCCeEEEecchhHHHHHHhchhhhhc
Q 036520 85 ATVDIPSENIQY-LKIAYDLLQHPFKQFVAQQSVDWIIVD-VMSHWAGKIAQEYHVPLLLFSAFSAAAFQFIANPECLVG 162 (473)
Q Consensus 85 ~~~~~~~~~~~~-~~~~~~~~~~~l~~ll~~~~pD~vI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 162 (473)
............ +........+.+.+++++++||+||+| .+.+++..+|+++|||+|.+.+...........+. +.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~-~~- 147 (402)
T 3ia7_A 70 VKQEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKE-LW- 147 (402)
T ss_dssp SCCTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHH-HH-
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcccccccc-cc-
Confidence 111111111222 223333456778888999999999999 78888999999999999988654332100000000 00
Q ss_pred CCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhccc-cEEEEcCCchhhhHHHHH
Q 036520 163 DGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILHSC-QAMAIRSCPEFEGEYLNL 241 (473)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~le~~~~~~ 241 (473)
+..+...+.. +. ............. +.... ........ +..+....+++++
T Consensus 148 ---------------~~~~~~~~~~--~~--~~~~~~~~~~~~~--g~~~~--~~~~~~~~~~~~l~~~~~~~~~----- 199 (402)
T 3ia7_A 148 ---------------KSNGQRHPAD--VE--AVHSVLVDLLGKY--GVDTP--VKEYWDEIEGLTIVFLPKSFQP----- 199 (402)
T ss_dssp ---------------HHHTCCCGGG--SH--HHHHHHHHHHHTT--TCCSC--HHHHHTCCCSCEEESSCGGGST-----
T ss_pred ---------------ccccccChhh--HH--HHHHHHHHHHHHc--CCCCC--hhhhhcCCCCeEEEEcChHhCC-----
Confidence 0000000000 00 0000000000011 00000 01112222 5566666666654
Q ss_pred HHhhcCCCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcC
Q 036520 242 LEKLTGKPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRK 321 (473)
Q Consensus 242 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 321 (473)
....++.++.++||+..... +...|+...+++++|||++||......+.+..+++++...+.+++|..+.
T Consensus 200 ~~~~~~~~~~~vGp~~~~~~----------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 269 (402)
T 3ia7_A 200 FAETFDERFAFVGPTLTGRD----------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGG 269 (402)
T ss_dssp TGGGCCTTEEECCCCCCC--------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCT
T ss_pred ccccCCCCeEEeCCCCCCcc----------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 24556778999999764321 23345554556679999999998777778899999999888888888775
Q ss_pred CCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCCceecccc-ccccccceeee
Q 036520 322 PEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPL-IIDQPLNARLL 400 (473)
Q Consensus 322 ~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~-~~DQ~~na~~v 400 (473)
.... +....++ +|+.+.+|+|+.++|+++++ ||||||+||+.||+++|+|+|++|. ..||+.||.++
T Consensus 270 ~~~~-~~~~~~~---------~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~ 337 (402)
T 3ia7_A 270 FLDP-AVLGPLP---------PNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERV 337 (402)
T ss_dssp TSCG-GGGCSCC---------TTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHH
T ss_pred cCCh-hhhCCCC---------CcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHH
Confidence 4221 1112233 49999999999999999888 9999999999999999999999999 99999999999
Q ss_pred eecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHH
Q 036520 401 VDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFVEYLKI 468 (473)
Q Consensus 401 ~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (473)
++.|+|+.+... .++.+.|.++|.++|+ |++++++++++++.+.+.++.+.+++.+.+.+..
T Consensus 338 ~~~g~g~~~~~~---~~~~~~l~~~~~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 338 IELGLGSVLRPD---QLEPASIREAVERLAA---DSAVRERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp HHTTSEEECCGG---GCSHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred HHcCCEEEccCC---CCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 999999999886 7899999999999999 8999999999999999888888888888777654
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=2.1e-40 Score=331.87 Aligned_cols=390 Identities=13% Similarity=0.091 Sum_probs=250.1
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEG 82 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~ 82 (473)
+.|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.. .++.++.++..... .++...
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~--------~G~~~~~i~~~~~~-----~~~~~~ 85 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA--------AGLTAVPVGTDVDL-----VDFMTH 85 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT--------TTCCEEECSCCCCH-----HHHHHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh--------CCCceeecCCccch-----HHHhhh
Confidence 34899999999999999999999999999999999999887665554 37888888732100 000000
Q ss_pred -CccC------CCC----Ch----hh----HHHHHHHHh-----h-hhhHHHHHHHhCCCcEEEEcCCcchHHHHHHHcC
Q 036520 83 -AEAT------VDI----PS----EN----IQYLKIAYD-----L-LQHPFKQFVAQQSVDWIIVDVMSHWAGKIAQEYH 137 (473)
Q Consensus 83 -~~~~------~~~----~~----~~----~~~~~~~~~-----~-~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lg 137 (473)
.... .+. .. .. ...+...+. . ....+.+++++++||+||+|.+.+++..+|+.+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~aA~~lg 165 (441)
T 2yjn_A 86 AGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTG 165 (441)
T ss_dssp TTHHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHHT
T ss_pred hhcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcchhHHHHHHHcC
Confidence 0000 000 10 00 111111111 1 3455666778899999999987788999999999
Q ss_pred CCeEEEecchhHHHHHHhchhhhhcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHH
Q 036520 138 VPLLLFSAFSAAAFQFIANPECLVGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTA 217 (473)
Q Consensus 138 iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (473)
||++.+...+............ ...+.+.. ....+ +..++........-. ....
T Consensus 166 iP~v~~~~~~~~~~~~~~~~~~------------------~~~~~~~~-~~~~~---~~~~l~~~~~~~g~~-~~~~--- 219 (441)
T 2yjn_A 166 TPHARLLWGPDITTRARQNFLG------------------LLPDQPEE-HREDP---LAEWLTWTLEKYGGP-AFDE--- 219 (441)
T ss_dssp CCEEEECSSCCHHHHHHHHHHH------------------HGGGSCTT-TCCCH---HHHHHHHHHHHTTCC-CCCG---
T ss_pred CCEEEEecCCCcchhhhhhhhh------------------hccccccc-cccch---HHHHHHHHHHHcCCC-CCCc---
Confidence 9999986544322111000000 00011100 00000 000000000000000 0000
Q ss_pred HhhccccEEEEcCCchhhhHHHHHHHhhcCCCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcccC-
Q 036520 218 EILHSCQAMAIRSCPEFEGEYLNLLEKLTGKPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECKL- 296 (473)
Q Consensus 218 ~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~- 296 (473)
... ..+..+....+.++++ ..++ ...+++.... .+.++.+|++..+++++|||++||+...
T Consensus 220 ~~~-~~~~~l~~~~~~~~~~------~~~~--~~~~~~~~~~---------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~ 281 (441)
T 2yjn_A 220 EVV-VGQWTIDPAPAAIRLD------TGLK--TVGMRYVDYN---------GPSVVPEWLHDEPERRRVCLTLGISSREN 281 (441)
T ss_dssp GGT-SCSSEEECSCGGGSCC------CCCC--EEECCCCCCC---------SSCCCCGGGSSCCSSCEEEEEC-------
T ss_pred ccc-CCCeEEEecCccccCC------CCCC--CCceeeeCCC---------CCcccchHhhcCCCCCEEEEECCCCcccc
Confidence 001 2333444444444421 1121 0222222111 1224667888666677999999999763
Q ss_pred --CHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhH
Q 036520 297 --SKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSV 374 (473)
Q Consensus 297 --~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~ 374 (473)
..+.+..+++++...+.+++|+.++.... ....+| +|+++.+|+||.++|+++++ ||||||+||+
T Consensus 282 ~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~--~l~~~~---------~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~ 348 (441)
T 2yjn_A 282 SIGQVSIEELLGAVGDVDAEIIATFDAQQLE--GVANIP---------DNVRTVGFVPMHALLPTCAA--TVHHGGPGSW 348 (441)
T ss_dssp ---CCSTTTTHHHHHTSSSEEEECCCTTTTS--SCSSCC---------SSEEECCSCCHHHHGGGCSE--EEECCCHHHH
T ss_pred cChHHHHHHHHHHHHcCCCEEEEEECCcchh--hhccCC---------CCEEEecCCCHHHHHhhCCE--EEECCCHHHH
Confidence 34667778899988899999988754221 111233 39999999999999988888 9999999999
Q ss_pred HHHHhhCCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCC
Q 036520 375 IETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKL 454 (473)
Q Consensus 375 ~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~ 454 (473)
+||+++|+|+|++|...||+.||+++++.|+|+.++.. .++.++|.++|.++++ +++++++++++++.+.+.++
T Consensus 349 ~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~---~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~ 422 (441)
T 2yjn_A 349 HTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVP---ELTPDQLRESVKRVLD---DPAHRAGAARMRDDMLAEPS 422 (441)
T ss_dssp HHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTT---TCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccc---cCCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999876 7899999999999999 89999999999999998888
Q ss_pred cHHHHHHHHHHHHH
Q 036520 455 HDDYSVRFVEYLKI 468 (473)
Q Consensus 455 ~~~~~~~~~~~~~~ 468 (473)
.+++++.+.+.+..
T Consensus 423 ~~~~~~~i~~~~~~ 436 (441)
T 2yjn_A 423 PAEVVGICEELAAG 436 (441)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh
Confidence 88888888776654
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=4.7e-40 Score=328.41 Aligned_cols=383 Identities=17% Similarity=0.157 Sum_probs=259.9
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCCCc
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEGAE 84 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~~~ 84 (473)
|||++++.++.||++|++.|+++|+++||+|+++++....+.+.. .++.++.++ ..++....
T Consensus 8 ~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~--------~g~~~~~~~----------~~~~~~~~ 69 (430)
T 2iyf_A 8 AHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA--------TGPRPVLYH----------STLPGPDA 69 (430)
T ss_dssp CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT--------TSCEEEECC----------CCSCCTTS
T ss_pred ceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh--------CCCEEEEcC----------CcCccccc
Confidence 699999999999999999999999999999999998876554443 377888776 22221111
Q ss_pred c---CCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCcchHHHHHHHcCCCeEEEecchhHHHHHHhchhhhh
Q 036520 85 A---TVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMSHWAGKIAQEYHVPLLLFSAFSAAAFQFIANPECLV 161 (473)
Q Consensus 85 ~---~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 161 (473)
. ...........+........+.+.+++++.+||+||+|.+.+++..+|+++|||++.+++...........+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~--- 146 (430)
T 2iyf_A 70 DPEAWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVA--- 146 (430)
T ss_dssp CGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTH---
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccc---
Confidence 0 0011111112222223345667888889999999999987778899999999999998865431100000000
Q ss_pred cCCCCCCCCCCccccCCCccccCCCc-ccccc--ccccccccccccCCCCchhhHHHHHHhhccccEEEEcCCchhhhHH
Q 036520 162 GDGQKRVRPSAESLTSVPEWVDFPSS-VALRT--FDAIGMHHGFYGMNASGITDAHRTAEILHSCQAMAIRSCPEFEGEY 238 (473)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~ 238 (473)
. ...+.... ..... ..+..+. ... +.. ..........+.+++++.+++++.
T Consensus 147 ----------------~-~~~~~~~~~~~~~~~~~~~~~~~----~~~--g~~--~~~~~~~~~~~~~l~~~~~~~~~~- 200 (430)
T 2iyf_A 147 ----------------E-PMWREPRQTERGRAYYARFEAWL----KEN--GIT--EHPDTFASHPPRSLVLIPKALQPH- 200 (430)
T ss_dssp ----------------H-HHHHHHHHSHHHHHHHHHHHHHH----HHT--TCC--SCHHHHHHCCSSEEECSCGGGSTT-
T ss_pred ----------------c-chhhhhccchHHHHHHHHHHHHH----HHh--CCC--CCHHHHhcCCCcEEEeCcHHhCCC-
Confidence 0 00000000 00000 0000000 000 000 001112224678899998888753
Q ss_pred HHHHHhhcCCC-eEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhcC-CCCEE
Q 036520 239 LNLLEKLTGKP-VIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLELS-GLPFL 316 (473)
Q Consensus 239 ~~~~~~~~~~~-~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i 316 (473)
.+.++++ +++|||...... +..+|....+++++||+++||......+.+..+++++++. +.+++
T Consensus 201 ----~~~~~~~~v~~vG~~~~~~~----------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~ 266 (430)
T 2iyf_A 201 ----ADRVDEDVYTFVGACQGDRA----------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLV 266 (430)
T ss_dssp ----GGGSCTTTEEECCCCC---------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEE
T ss_pred ----cccCCCccEEEeCCcCCCCC----------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEE
Confidence 2356677 999998543211 1224555445567999999999855567888899999885 88888
Q ss_pred EEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCCceeccccccccccc
Q 036520 317 WALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLIIDQPLN 396 (473)
Q Consensus 317 ~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~~DQ~~n 396 (473)
|+++.+... +....++ +|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|..+||..|
T Consensus 267 ~~~G~~~~~-~~l~~~~---------~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~ 334 (430)
T 2iyf_A 267 LQIGRKVTP-AELGELP---------DNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGN 334 (430)
T ss_dssp EECC---CG-GGGCSCC---------TTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHH
T ss_pred EEeCCCCCh-HHhccCC---------CCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHH
Confidence 887754221 0111223 48999999999999999998 99999999999999999999999999999999
Q ss_pred eeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHHHHH
Q 036520 397 ARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFVEYL 466 (473)
Q Consensus 397 a~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 466 (473)
|.++++.|+|+.+... .++.++|.++|.++++ |+++++++.++++.+.+.++.+..++.+++.+
T Consensus 335 a~~~~~~g~g~~~~~~---~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 398 (430)
T 2iyf_A 335 ADMLQGLGVARKLATE---EATADLLRETALALVD---DPEVARRLRRIQAEMAQEGGTRRAADLIEAEL 398 (430)
T ss_dssp HHHHHHTTSEEECCCC----CCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTS
T ss_pred HHHHHHcCCEEEcCCC---CCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHh
Confidence 9999999999998875 7899999999999999 88999999999999887776677766666544
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=3.3e-40 Score=324.58 Aligned_cols=363 Identities=13% Similarity=0.076 Sum_probs=255.1
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCcc-cccccc-CCCCCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPAS-AALDDK-LLLPEG 82 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~-~~~~~~-~~l~~~ 82 (473)
|||++++.++.||++|+++|+++|+++||+|++++++...+.+.. .++.++.++.... ...... .+.+..
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~--------~g~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG--------VGLPAVATTDLPIRHFITTDREGRPEA 72 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH--------TTCCEEESCSSCHHHHHHBCTTSCBCC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh--------CCCEEEEeCCcchHHHHhhhcccCccc
Confidence 799999999999999999999999999999999998775544433 3677887763210 000000 001000
Q ss_pred CccCCCCChhhHHH-----HHHHHhhhhhHHHHHHHhCCCcEEEEcCCcchHHHHHHHcCCCeEEEecchhHHHHHHhch
Q 036520 83 AEATVDIPSENIQY-----LKIAYDLLQHPFKQFVAQQSVDWIIVDVMSHWAGKIAQEYHVPLLLFSAFSAAAFQFIANP 157 (473)
Q Consensus 83 ~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 157 (473)
.+........ +..........+.+++++.+||+||+|.+..++..+|+.+|||++.+...+..
T Consensus 73 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-------- 140 (384)
T 2p6p_A 73 ----IPSDPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-------- 140 (384)
T ss_dssp ----CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC--------
T ss_pred ----cCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc--------
Confidence 0000011111 12222334566778888899999999988788889999999999987542110
Q ss_pred hhhhcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhh-----ccccEEEEcCCc
Q 036520 158 ECLVGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEIL-----HSCQAMAIRSCP 232 (473)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~ 232 (473)
.+. +. .... ....+..... ...+.+++++.+
T Consensus 141 ---------------------~~~--------~~-----~~~~----------~~~~~~~~~~g~~~~~~~~~~l~~~~~ 176 (384)
T 2p6p_A 141 ---------------------ADG--------IH-----PGAD----------AELRPELSELGLERLPAPDLFIDICPP 176 (384)
T ss_dssp ---------------------CTT--------TH-----HHHH----------HHTHHHHHHTTCSSCCCCSEEEECSCG
T ss_pred ---------------------cch--------hh-----HHHH----------HHHHHHHHHcCCCCCCCCCeEEEECCH
Confidence 000 00 0000 0000000000 115678888888
Q ss_pred hhhhHHHHHHHhhcC-CCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcccC-----CHHHHHHHHH
Q 036520 233 EFEGEYLNLLEKLTG-KPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECKL-----SKDQVYEIAY 306 (473)
Q Consensus 233 ~le~~~~~~~~~~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~-----~~~~~~~~~~ 306 (473)
.++++ ..++ .++.+++. .. +.++.+|++..+++++|||++||.... +.+.+..+++
T Consensus 177 ~~~~~------~~~~~~~~~~~~~---~~---------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~ 238 (384)
T 2p6p_A 177 SLRPA------NAAPARMMRHVAT---SR---------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAK 238 (384)
T ss_dssp GGSCT------TSCCCEECCCCCC---CC---------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHH
T ss_pred HHCCC------CCCCCCceEecCC---CC---------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHH
Confidence 77753 1122 12333321 10 123567887655567999999999864 4577888999
Q ss_pred HHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCCceec
Q 036520 307 GLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGHSLVV 386 (473)
Q Consensus 307 al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~ 386 (473)
++.+.+.+++|+.++.. . +.+.. ..+|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|+
T Consensus 239 al~~~~~~~~~~~g~~~-----~----~~l~~--~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~ 304 (384)
T 2p6p_A 239 DLVRWDVELIVAAPDTV-----A----EALRA--EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLL 304 (384)
T ss_dssp HHHTTTCEEEEECCHHH-----H----HHHHH--HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEE
T ss_pred HHhcCCcEEEEEeCCCC-----H----HhhCC--CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEE
Confidence 99999999999876420 0 11111 1348999 99999999998888 9999999999999999999999
Q ss_pred cccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHHHHH
Q 036520 387 LPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFVEYL 466 (473)
Q Consensus 387 ~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 466 (473)
+|...||+.||.++++.|+|+.++.. .++.++|.++|+++++ |++++++++++++.+++.++.+++++.+.+.+
T Consensus 305 ~p~~~dq~~~a~~~~~~g~g~~~~~~---~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 305 IPKGSVLEAPARRVADYGAAIALLPG---EDSTEAIADSCQELQA---KDTYARRAQDLSREISGMPLPATVVTALEQLA 378 (384)
T ss_dssp CCCSHHHHHHHHHHHHHTSEEECCTT---CCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred ccCcccchHHHHHHHHCCCeEecCcC---CCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 99999999999999999999998875 7899999999999999 89999999999999999999999998888887
Q ss_pred HHh
Q 036520 467 KIN 469 (473)
Q Consensus 467 ~~~ 469 (473)
..+
T Consensus 379 ~~~ 381 (384)
T 2p6p_A 379 HHH 381 (384)
T ss_dssp HHH
T ss_pred hhc
Confidence 654
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=4.9e-38 Score=310.55 Aligned_cols=370 Identities=16% Similarity=0.132 Sum_probs=233.8
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEG 82 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~ 82 (473)
.+|||+|++.++.||++|+++|+++|+++||+|++++++.+.+.+... ++.+..++.+.. ..........+
T Consensus 14 ~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~--------G~~~~~~~~~~~-~~~~~~~~~~~ 84 (398)
T 4fzr_A 14 SHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA--------GLPFAPTCPSLD-MPEVLSWDREG 84 (398)
T ss_dssp -CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT--------TCCEEEEESSCC-HHHHHSBCTTS
T ss_pred CceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC--------CCeeEecCCccc-hHhhhhhhccC
Confidence 459999999999999999999999999999999999987766655543 677777762100 00000000000
Q ss_pred Cc-cCCCCCh----hhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCcchHHHHHHHcCCCeEEEecchhHHHHHHhch
Q 036520 83 AE-ATVDIPS----ENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMSHWAGKIAQEYHVPLLLFSAFSAAAFQFIANP 157 (473)
Q Consensus 83 ~~-~~~~~~~----~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 157 (473)
.. ....... .....+........+.+.+++++++||+||+|...+++..+|+.+|||++.+.............
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~~- 163 (398)
T 4fzr_A 85 NRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIKSA- 163 (398)
T ss_dssp CBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHHHH-
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhhHH-
Confidence 00 0000001 11122233334456678888999999999999888889999999999999876543211000000
Q ss_pred hhhhcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhccccEEEEcCCchhhhH
Q 036520 158 ECLVGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILHSCQAMAIRSCPEFEGE 237 (473)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~ 237 (473)
+..++......+ .+. .....+..+....+.++.+
T Consensus 164 -------------------------------------~~~~l~~~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~ 197 (398)
T 4fzr_A 164 -------------------------------------GVGELAPELAEL--GLT-------DFPDPLLSIDVCPPSMEAQ 197 (398)
T ss_dssp -------------------------------------HHHHTHHHHHTT--TCS-------SCCCCSEEEECSCGGGC--
T ss_pred -------------------------------------HHHHHHHHHHHc--CCC-------CCCCCCeEEEeCChhhCCC
Confidence 000000000000 000 0111233444444444321
Q ss_pred HHHHHHhhcCCCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcccC--------CHHHHHHHHHHHh
Q 036520 238 YLNLLEKLTGKPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECKL--------SKDQVYEIAYGLE 309 (473)
Q Consensus 238 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~--------~~~~~~~~~~al~ 309 (473)
......++.++++.. ...++.+|+...+.+++|||++||.... ..+.+..+++++.
T Consensus 198 -----~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~ 261 (398)
T 4fzr_A 198 -----PKPGTTKMRYVPYNG-----------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELP 261 (398)
T ss_dssp -------CCCEECCCCCCCC-----------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGG
T ss_pred -----CCCCCCCeeeeCCCC-----------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHH
Confidence 000000111221100 1123556666555567999999999753 3466888999999
Q ss_pred cCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCCceecccc
Q 036520 310 LSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPL 389 (473)
Q Consensus 310 ~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~ 389 (473)
+.+.+++|+.++.... ....++ +|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|.
T Consensus 262 ~~~~~~v~~~~~~~~~--~l~~~~---------~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~ 328 (398)
T 4fzr_A 262 KLGFEVVVAVSDKLAQ--TLQPLP---------EGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPV 328 (398)
T ss_dssp GGTCEEEECCCC----------CC---------TTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCC
T ss_pred hCCCEEEEEeCCcchh--hhccCC---------CcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCC
Confidence 8899999988764211 122334 39999999999999999888 9999999999999999999999999
Q ss_pred ccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHH
Q 036520 390 IIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFV 463 (473)
Q Consensus 390 ~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 463 (473)
..||..||.++++.|+|+.++.. .++.+.|.++|.++|+ |+++++++++.++.+.+.++.++.++.+.
T Consensus 329 ~~~q~~~a~~~~~~g~g~~~~~~---~~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 396 (398)
T 4fzr_A 329 IAEVWDSARLLHAAGAGVEVPWE---QAGVESVLAACARIRD---DSSYVGNARRLAAEMATLPTPADIVRLIE 396 (398)
T ss_dssp SGGGHHHHHHHHHTTSEEECC----------CHHHHHHHHHH---CTHHHHHHHHHHHHHTTSCCHHHHHHHHT
T ss_pred chhHHHHHHHHHHcCCEEecCcc---cCCHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Confidence 99999999999999999999876 7899999999999999 89999999999999998888777776654
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=4.6e-37 Score=303.59 Aligned_cols=366 Identities=17% Similarity=0.127 Sum_probs=248.1
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCcccccccc------
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDK------ 76 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~------ 76 (473)
+.|||+|++.++.||++|++.|+++|+++||+|+++++ .+.+.+.. .++.+..++.+.. .....
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~--------~G~~~~~~~~~~~-~~~~~~~~~~~ 88 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA--------AGLEVVDVAPDYS-AVKVFEQVAKD 88 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT--------TTCEEEESSTTCC-HHHHHHHHHHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh--------CCCeeEecCCccC-HHHHhhhcccC
Confidence 45899999999999999999999999999999999998 66555544 3788888862100 00000
Q ss_pred -CCCCCCC-ccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCcchHHHHHHHcCCCeEEEecchhHHHHHH
Q 036520 77 -LLLPEGA-EATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMSHWAGKIAQEYHVPLLLFSAFSAAAFQFI 154 (473)
Q Consensus 77 -~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 154 (473)
..++... .............+..........+.+++++++||+||+|...+++..+|+.+|||+|.+.......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~---- 164 (398)
T 3oti_A 89 NPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT---- 164 (398)
T ss_dssp CHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC----
T ss_pred CccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc----
Confidence 0000000 0001112233344445555677788999999999999999888889999999999999765422100
Q ss_pred hchhhhhcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhccccEEEEcCCchh
Q 036520 155 ANPECLVGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILHSCQAMAIRSCPEF 234 (473)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 234 (473)
..+. .....+... ...+........+..+....+.+
T Consensus 165 ------------------------~~~~----------~~~~~~l~~----------~~~~~~~~~~~~~~~~~~~~~~~ 200 (398)
T 3oti_A 165 ------------------------RGMH----------RSIASFLTD----------LMDKHQVSLPEPVATIESFPPSL 200 (398)
T ss_dssp ------------------------TTHH----------HHHHTTCHH----------HHHHTTCCCCCCSEEECSSCGGG
T ss_pred ------------------------cchh----------hHHHHHHHH----------HHHHcCCCCCCCCeEEEeCCHHH
Confidence 0000 000000000 00000000111233333333333
Q ss_pred hhHHHHHHHhhcCCCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcccC--CHHHHHHHHHHHhcCC
Q 036520 235 EGEYLNLLEKLTGKPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECKL--SKDQVYEIAYGLELSG 312 (473)
Q Consensus 235 e~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~--~~~~~~~~~~al~~~~ 312 (473)
..+ .......+.++ |. .....+.+|+...+++++|||++||.... ..+.+..+++++.+.+
T Consensus 201 ~~~-----~~~~~~~~~~~-~~-----------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~ 263 (398)
T 3oti_A 201 LLE-----AEPEGWFMRWV-PY-----------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVD 263 (398)
T ss_dssp GTT-----SCCCSBCCCCC-CC-----------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSS
T ss_pred CCC-----CCCCCCCcccc-CC-----------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCC
Confidence 311 00000011111 00 01123556776556677999999999653 5677888999999889
Q ss_pred CCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCCceeccccccc
Q 036520 313 LPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLIID 392 (473)
Q Consensus 313 ~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~~D 392 (473)
.+++|+.++.... ....+++ |+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...|
T Consensus 264 ~~~v~~~g~~~~~--~l~~~~~---------~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~d 330 (398)
T 3oti_A 264 ADFVLALGDLDIS--PLGTLPR---------NVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRD 330 (398)
T ss_dssp SEEEEECTTSCCG--GGCSCCT---------TEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTC
T ss_pred CEEEEEECCcChh--hhccCCC---------cEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCch
Confidence 9999998765321 1223343 9999999999999999888 9999999999999999999999999999
Q ss_pred cccce--eeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHHHHH
Q 036520 393 QPLNA--RLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFVEYL 466 (473)
Q Consensus 393 Q~~na--~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 466 (473)
|..|| .++++.|+|+.++.. ..+.+.|. ++++ |++++++++++++.+.+.++.++.++.+.+.+
T Consensus 331 q~~~a~~~~~~~~g~g~~~~~~---~~~~~~l~----~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 331 QFQHTAREAVSRRGIGLVSTSD---KVDADLLR----RLIG---DESLRTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp CSSCTTHHHHHHHTSEEECCGG---GCCHHHHH----HHHH---CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCEEeeCCC---CCCHHHHH----HHHc---CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 99999 999999999999876 77887777 8888 89999999999999998988888888776654
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=2.7e-36 Score=297.33 Aligned_cols=373 Identities=14% Similarity=0.090 Sum_probs=244.4
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCcccccccc-CCCCCC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDK-LLLPEG 82 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~-~~l~~~ 82 (473)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+.. .++.+..++.+........ ......
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~--------~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG--------AGLTTAGIRGNDRTGDTGGTTQLRFP 72 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH--------BTCEEEEC--------------CCSC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh--------CCCceeeecCCccchhhhhhhccccc
Confidence 5899999999999999999999999999999999998766554444 3677777721111000000 000000
Q ss_pred CccCC-CCChhhHHHHHHHHhhh-------hhHHHHHHHhCCCcEEEEcCCcchHHHHHHHcCCCeEEEecchhHHHHHH
Q 036520 83 AEATV-DIPSENIQYLKIAYDLL-------QHPFKQFVAQQSVDWIIVDVMSHWAGKIAQEYHVPLLLFSAFSAAAFQFI 154 (473)
Q Consensus 83 ~~~~~-~~~~~~~~~~~~~~~~~-------~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 154 (473)
..... .........+....... ...+.+++++++||+||+|...+++..+|+.+|||++.+..........
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~- 151 (391)
T 3tsa_A 73 NPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTAGP- 151 (391)
T ss_dssp CGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTTTH-
T ss_pred ccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcccccc-
Confidence 00000 00112222233333334 6778889999999999999877888899999999999875432110000
Q ss_pred hchhhhhcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhccccEEEEcCCchh
Q 036520 155 ANPECLVGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILHSCQAMAIRSCPEF 234 (473)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 234 (473)
. . ..+..+.......+. . ......+..+....+++
T Consensus 152 --------------------------~-~---------~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~~~ 186 (391)
T 3tsa_A 152 --------------------------F-S---------DRAHELLDPVCRHHG--L-------TGLPTPELILDPCPPSL 186 (391)
T ss_dssp --------------------------H-H---------HHHHHHHHHHHHHTT--S-------SSSCCCSEEEECSCGGG
T ss_pred --------------------------c-c---------chHHHHHHHHHHHcC--C-------CCCCCCceEEEecChhh
Confidence 0 0 000000000000000 0 00011144444444444
Q ss_pred hhHHHHHHHhhcCCCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCccc--CC-HHHHHHHHHHHhcC
Q 036520 235 EGEYLNLLEKLTGKPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECK--LS-KDQVYEIAYGLELS 311 (473)
Q Consensus 235 e~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~--~~-~~~~~~~~~al~~~ 311 (473)
+.. .......+.++ |.. ....+..|+...+++++|++++||... .. .+.+..++++ .+.
T Consensus 187 ~~~-----~~~~~~~~~~~-p~~-----------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~ 248 (391)
T 3tsa_A 187 QAS-----DAPQGAPVQYV-PYN-----------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TEL 248 (391)
T ss_dssp SCT-----TSCCCEECCCC-CCC-----------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTS
T ss_pred cCC-----CCCccCCeeee-cCC-----------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccC
Confidence 321 00001111222 110 112345677665667799999999854 23 6778888888 776
Q ss_pred -CCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCCceeccccc
Q 036520 312 -GLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLI 390 (473)
Q Consensus 312 -~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~ 390 (473)
+.+++|+.++.... ....++ +|+.+.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|..
T Consensus 249 p~~~~v~~~~~~~~~--~l~~~~---------~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~ 315 (391)
T 3tsa_A 249 PGVEAVIAVPPEHRA--LLTDLP---------DNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQY 315 (391)
T ss_dssp TTEEEEEECCGGGGG--GCTTCC---------TTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred CCeEEEEEECCcchh--hcccCC---------CCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCc
Confidence 77888887653211 111223 49999999999999988888 99999999999999999999999999
Q ss_pred cccccceeeeeecceEEEEec--CCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHH
Q 036520 391 IDQPLNARLLVDKDLAVQVER--KDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFVEYLK 467 (473)
Q Consensus 391 ~DQ~~na~~v~~~G~G~~l~~--~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (473)
.||+.|+.++++.|+|+.+.. . ..+.+.|.++|.++|+ |++++++++++++.+.+.++.+++++.+.+.+.
T Consensus 316 ~~q~~~a~~~~~~g~g~~~~~~~~---~~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 316 FDQFDYARNLAAAGAGICLPDEQA---QSDHEQFTDSIATVLG---DTGFAAAAIKLSDEITAMPHPAALVRTLENTAA 388 (391)
T ss_dssp TTHHHHHHHHHHTTSEEECCSHHH---HTCHHHHHHHHHHHHT---CTHHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred ccHHHHHHHHHHcCCEEecCcccc---cCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 999999999999999999987 5 6799999999999999 899999999999999988888888887776554
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=6.9e-34 Score=282.11 Aligned_cols=382 Identities=15% Similarity=0.139 Sum_probs=252.5
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCC---cc----ccccc
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLP---AS----AALDD 75 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~---~~----~~~~~ 75 (473)
++|||++++.++.||++|++.|+++|+++||+|++++++...+.+.. .++.++.++.. .. .....
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~--------~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK--------LGFEPVATGMPVFDGFLAALRIRFD 90 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH--------TTCEEEECCCCHHHHHHHHHHHHHS
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh--------cCCceeecCcccccchhhhhhhhhc
Confidence 56999999999999999999999999999999999998765444433 37888877620 00 00000
Q ss_pred cCCCCCCCccCCCCChhhHHHHHHH-HhhhhhHHHHHHHhCCCcEEEEcCCcchHHHHHHHcCCCeEEEecchhHHHHHH
Q 036520 76 KLLLPEGAEATVDIPSENIQYLKIA-YDLLQHPFKQFVAQQSVDWIIVDVMSHWAGKIAQEYHVPLLLFSAFSAAAFQFI 154 (473)
Q Consensus 76 ~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 154 (473)
....+.. ............+... .......+.+++++.+||+||+|...+++..+|+.+|||+|.+...........
T Consensus 91 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~~ 168 (412)
T 3otg_A 91 TDSPEGL--TPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDDLT 168 (412)
T ss_dssp CSCCTTC--CHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCSHHH
T ss_pred ccCCccC--ChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEecccccCchhhh
Confidence 0000000 0000001112222222 233456788889999999999998777788899999999998654322100000
Q ss_pred hchhhhhcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhccccEEEEcCCchh
Q 036520 155 ANPECLVGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILHSCQAMAIRSCPEF 234 (473)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 234 (473)
. .+..+......+. ++.... .......+.++..+...+
T Consensus 169 ~--------------------------------------~~~~~~~~~~~~~--g~~~~~--~~~~~~~d~~i~~~~~~~ 206 (412)
T 3otg_A 169 R--------------------------------------SIEEEVRGLAQRL--GLDLPP--GRIDGFGNPFIDIFPPSL 206 (412)
T ss_dssp H--------------------------------------HHHHHHHHHHHHT--TCCCCS--SCCGGGGCCEEECSCGGG
T ss_pred H--------------------------------------HHHHHHHHHHHHc--CCCCCc--ccccCCCCeEEeeCCHHh
Confidence 0 0000000000000 000000 000123444555554444
Q ss_pred hhHHHHHHHhhcCCCeEEeeccCCCCCCCCCCCCchhhhhcc-ccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhcCCC
Q 036520 235 EGEYLNLLEKLTGKPVIPVGLLTPEPNSAKGRDHQISKIFQW-LDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLELSGL 313 (473)
Q Consensus 235 e~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~ 313 (473)
+.. ...+......+-+..... ..+..+| ....+++++|++++||......+.+..+++++.+.+.
T Consensus 207 ~~~-----~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~ 272 (412)
T 3otg_A 207 QEP-----EFRARPRRHELRPVPFAE---------QGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDA 272 (412)
T ss_dssp SCH-----HHHTCTTEEECCCCCCCC---------CCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSS
T ss_pred cCC-----cccCCCCcceeeccCCCC---------CCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCC
Confidence 432 112211111111111110 1123445 2323446699999999975667888889999998899
Q ss_pred CEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCCceecccccccc
Q 036520 314 PFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLIIDQ 393 (473)
Q Consensus 314 ~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~~DQ 393 (473)
+++|+.++.... +....+++ |+.+.+|+|+.++|+++++ ||+|||+||++||+++|+|+|++|...||
T Consensus 273 ~~~~~~g~~~~~-~~l~~~~~---------~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q 340 (412)
T 3otg_A 273 DVLVASGPSLDV-SGLGEVPA---------NVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDS 340 (412)
T ss_dssp EEEEECCSSCCC-TTCCCCCT---------TEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred EEEEEECCCCCh-hhhccCCC---------cEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhH
Confidence 999988765411 11223333 9999999999999999998 99999999999999999999999999999
Q ss_pred ccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHH
Q 036520 394 PLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFVEYLKI 468 (473)
Q Consensus 394 ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (473)
..|+.++++.|.|..+... .++.++|.++|.++++ |+++++++.+.++.+.+..+.+..++.+.+.+..
T Consensus 341 ~~~~~~v~~~g~g~~~~~~---~~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 341 FANAQAVAQAGAGDHLLPD---NISPDSVSGAAKRLLA---EESYRAGARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHHHHHHHTSEEECCGG---GCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred HHHHHHHHHcCCEEecCcc---cCCHHHHHHHHHHHHh---CHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 9999999999999999886 7899999999999999 8999999999999998888888888888776644
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=2e-29 Score=245.10 Aligned_cols=343 Identities=15% Similarity=0.091 Sum_probs=208.5
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccc--cCCCCCCCcccCCCeEEEEecCCccccccccCC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQ--RLPKPAPESEVAALINFVEFPLPASAALDDKLL 78 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~--~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~ 78 (473)
|.+ ||++...|+.||++|+++||++|.++||+|+|+++....+ .+++ .++.++.++.. +
T Consensus 1 M~~--~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~--------~g~~~~~i~~~---------~ 61 (365)
T 3s2u_A 1 MKG--NVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK--------AGLPLHLIQVS---------G 61 (365)
T ss_dssp --C--EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG--------GTCCEEECC------------
T ss_pred CCC--cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh--------cCCcEEEEECC---------C
Confidence 555 7999999888999999999999999999999999765322 2333 36778777632 2
Q ss_pred CCCCCccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCc--chHHHHHHHcCCCeEEEecchhHHHHHHhc
Q 036520 79 LPEGAEATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMS--HWAGKIAQEYHVPLLLFSAFSAAAFQFIAN 156 (473)
Q Consensus 79 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 156 (473)
++.. .........+..+. . .....+++++.+||+||++... ..+..+|+.+|||++..-..
T Consensus 62 ~~~~--~~~~~~~~~~~~~~----~-~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n---------- 124 (365)
T 3s2u_A 62 LRGK--GLKSLVKAPLELLK----S-LFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN---------- 124 (365)
T ss_dssp -------------CHHHHHH----H-HHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS----------
T ss_pred cCCC--CHHHHHHHHHHHHH----H-HHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc----------
Confidence 2211 01111111122221 1 2245678899999999999643 34557899999999864210
Q ss_pred hhhhhcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhccccEEEEcCCchhhh
Q 036520 157 PECLVGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILHSCQAMAIRSCPEFEG 236 (473)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~ 236 (473)
.+|+ ...++ ..+..+.+. .++++.-+
T Consensus 125 ------------------------~~~G---------------------------~~nr~--l~~~a~~v~-~~~~~~~~ 150 (365)
T 3s2u_A 125 ------------------------AVAG---------------------------TANRS--LAPIARRVC-EAFPDTFP 150 (365)
T ss_dssp ------------------------SSCC---------------------------HHHHH--HGGGCSEEE-ESSTTSSC
T ss_pred ------------------------hhhh---------------------------hHHHh--hccccceee-eccccccc
Confidence 0010 00000 011122222 23322111
Q ss_pred HHHHHHHhhcCCCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhcC----C
Q 036520 237 EYLNLLEKLTGKPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLELS----G 312 (473)
Q Consensus 237 ~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~----~ 312 (473)
...+.+++|......... .-.......+.+++|+|..||.... ...+.+.+++... +
T Consensus 151 ---------~~~k~~~~g~pvr~~~~~--------~~~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~ 211 (365)
T 3s2u_A 151 ---------ASDKRLTTGNPVRGELFL--------DAHARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIR 211 (365)
T ss_dssp ---------C---CEECCCCCCGGGCC--------CTTSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTC
T ss_pred ---------CcCcEEEECCCCchhhcc--------chhhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccc
Confidence 113456667433211110 0001112223355899988988642 2223345555443 4
Q ss_pred CCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccch-HHHhhCCCcceeeeccCchhHHHHHhhCCceeccccc-
Q 036520 313 LPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQ-LEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLI- 390 (473)
Q Consensus 313 ~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq-~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~- 390 (473)
..++|..+... .....+.. .....++.+.+|+++ .++|+.+++ +|||+|.+|+.|++++|+|+|.+|+.
T Consensus 212 ~~vi~~~G~~~-----~~~~~~~~--~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~ 282 (365)
T 3s2u_A 212 PAIRHQAGRQH-----AEITAERY--RTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPH 282 (365)
T ss_dssp CEEEEECCTTT-----HHHHHHHH--HHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC---
T ss_pred eEEEEecCccc-----ccccccee--cccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCC
Confidence 45666655431 11111111 112347888899988 689999999 99999999999999999999999974
Q ss_pred ---cccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHH
Q 036520 391 ---IDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFVEYLK 467 (473)
Q Consensus 391 ---~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (473)
.+|..||+.+++.|+|+.++.+ .+|++.|.++|.++++ |++.++++.+-++.+....++++.++.+++.++
T Consensus 283 ~~~~~Q~~NA~~l~~~G~a~~l~~~---~~~~~~L~~~i~~ll~---d~~~~~~m~~~a~~~~~~~aa~~ia~~i~~lar 356 (365)
T 3s2u_A 283 AIDDHQTRNAEFLVRSGAGRLLPQK---STGAAELAAQLSEVLM---HPETLRSMADQARSLAKPEATRTVVDACLEVAR 356 (365)
T ss_dssp --CCHHHHHHHHHHTTTSEEECCTT---TCCHHHHHHHHHHHHH---CTHHHHHHHHHHHHTCCTTHHHHHHHHHHHHC-
T ss_pred CCCcHHHHHHHHHHHCCCEEEeecC---CCCHHHHHHHHHHHHC---CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHc
Confidence 5899999999999999999887 8999999999999999 788877777777776655444555555555443
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=4.6e-28 Score=209.55 Aligned_cols=162 Identities=21% Similarity=0.342 Sum_probs=139.7
Q ss_pred chhhhhccccCCCCCcEEEEeecCccc-CCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEE
Q 036520 269 QISKIFQWLDEQKPRSVVFVGFGSECK-LSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVS 347 (473)
Q Consensus 269 ~~~~~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~ 347 (473)
.++++.+|++..+++++|||++||... ...+.+..+++++.+.+.+++|+.++.. ...+++ |+.+
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~-----~~~~~~---------~v~~ 72 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK-----PDTLGL---------NTRL 72 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC-----CTTCCT---------TEEE
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC-----cccCCC---------cEEE
Confidence 467899999877667799999999963 5678888999999988899999987542 122343 8999
Q ss_pred ecccchHHHhhCCCcceeeeccCchhHHHHHhhCCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHH
Q 036520 348 IGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALR 427 (473)
Q Consensus 348 ~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~ 427 (473)
.+|+||.+++.|+++++||||||+||++||+++|+|+|++|...||..||.++++.|+|+.++.. .++.++|.++|.
T Consensus 73 ~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~---~~~~~~l~~~i~ 149 (170)
T 2o6l_A 73 YKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFN---TMSSTDLLNALK 149 (170)
T ss_dssp ESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTT---TCCHHHHHHHHH
T ss_pred ecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccc---cCCHHHHHHHHH
Confidence 99999999997777777999999999999999999999999999999999999999999999876 789999999999
Q ss_pred HHhcCcchHHHHHHHHHHHHHhc
Q 036520 428 LATVSEEGEKLRVRAREAANTFN 450 (473)
Q Consensus 428 ~ll~~~~~~~~~~~a~~~~~~~~ 450 (473)
++++ +++|+++++++++.++
T Consensus 150 ~ll~---~~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 150 RVIN---DPSYKENVMKLSRIQH 169 (170)
T ss_dssp HHHH---CHHHHHHHHHHC----
T ss_pred HHHc---CHHHHHHHHHHHHHhh
Confidence 9999 8899999999998875
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.86 E-value=2.6e-20 Score=181.13 Aligned_cols=337 Identities=13% Similarity=0.025 Sum_probs=207.8
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccc--cCCCCCCCcccCCCeEEEEecCCccccccccCCCCCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQ--RLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEG 82 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~--~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~ 82 (473)
|||++++.+..||..+++.|+++|+++||+|++++...... .+.. .++.++.++.+. +...
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~--------~g~~~~~~~~~~---------~~~~ 69 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK--------HGIEIDFIRISG---------LRGK 69 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG--------GTCEEEECCCCC---------CTTC
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc--------cCCceEEecCCc---------cCcC
Confidence 89999998878999999999999999999999999765311 1111 367777765321 1110
Q ss_pred CccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCc--chHHHHHHHcCCCeEEEecchhHHHHHHhchhhh
Q 036520 83 AEATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMS--HWAGKIAQEYHVPLLLFSAFSAAAFQFIANPECL 160 (473)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 160 (473)
............ ......+.+++++.+||+|+++... ..+..+++.+|+|+|.......
T Consensus 70 ------~~~~~~~~~~~~-~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~------------ 130 (364)
T 1f0k_A 70 ------GIKALIAAPLRI-FNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI------------ 130 (364)
T ss_dssp ------CHHHHHTCHHHH-HHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS------------
T ss_pred ------ccHHHHHHHHHH-HHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC------------
Confidence 000000000001 1123456778888899999998532 3456788899999986432100
Q ss_pred hcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhccccEEEEcCCchhhhHHHH
Q 036520 161 VGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILHSCQAMAIRSCPEFEGEYLN 240 (473)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~ 240 (473)
+. + ..+ ...+..+.+++.+...
T Consensus 131 ----------------------~~-------------~--------------~~~--~~~~~~d~v~~~~~~~------- 152 (364)
T 1f0k_A 131 ----------------------AG-------------L--------------TNK--WLAKIATKVMQAFPGA------- 152 (364)
T ss_dssp ----------------------CC-------------H--------------HHH--HHTTTCSEEEESSTTS-------
T ss_pred ----------------------Cc-------------H--------------HHH--HHHHhCCEEEecChhh-------
Confidence 00 0 000 1112334444433211
Q ss_pred HHHhhcCCCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhcC--CCCEEEE
Q 036520 241 LLEKLTGKPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLELS--GLPFLWA 318 (473)
Q Consensus 241 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~ 318 (473)
++ ++.+||.-....... ... ..+.+...+.+++|++..|+.. .......+++++... +.+++++
T Consensus 153 -----~~-~~~~i~n~v~~~~~~---~~~---~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i 218 (364)
T 1f0k_A 153 -----FP-NAEVVGNPVRTDVLA---LPL---PQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQ 218 (364)
T ss_dssp -----SS-SCEECCCCCCHHHHT---SCC---HHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEE
T ss_pred -----cC-CceEeCCccchhhcc---cch---hhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEE
Confidence 12 355555321100000 000 0111112223446777777775 334444455555443 4555666
Q ss_pred EcCCCCCCCccccCchhhhhhc---CCCceEEecccch-HHHhhCCCcceeeeccCchhHHHHHhhCCceeccccc---c
Q 036520 319 LRKPEWATDDVDALPLGFADTI---RGKGIVSIGWAPQ-LEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLI---I 391 (473)
Q Consensus 319 ~~~~~~~~~~~~~~p~~~~~~~---~~~nv~~~~~~pq-~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~---~ 391 (473)
.+.+. .+.+.+.. .-+|+.+.+|+++ ..++..+++ +|+++|.+++.||+++|+|+|+.|.. .
T Consensus 219 ~G~~~---------~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~ 287 (364)
T 1f0k_A 219 SGKGS---------QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDR 287 (364)
T ss_dssp CCTTC---------HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTC
T ss_pred cCCch---------HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCch
Confidence 66441 11222211 2248999999954 889999999 99999999999999999999999987 7
Q ss_pred ccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHH
Q 036520 392 DQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFVEYLKI 468 (473)
Q Consensus 392 DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (473)
||..|+..+++.|.|..++.. .++.++|+++|.++ + ++.++++.+-+....+..+.+..++.+.+..++
T Consensus 288 ~q~~~~~~~~~~g~g~~~~~~---d~~~~~la~~i~~l-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 288 QQYWNALPLEKAGAAKIIEQP---QLSVDAVANTLAGW-S----RETLLTMAERARAASIPDATERVANEVSRVARA 356 (364)
T ss_dssp HHHHHHHHHHHTTSEEECCGG---GCCHHHHHHHHHTC-C----HHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHhCCcEEEeccc---cCCHHHHHHHHHhc-C----HHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHH
Confidence 999999999999999988875 66799999999999 5 566666666666655555556677777766654
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.64 E-value=2.3e-15 Score=138.80 Aligned_cols=117 Identities=15% Similarity=0.061 Sum_probs=90.2
Q ss_pred CcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhc-CCCceEEecccch-HHHhhCC
Q 036520 283 RSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTI-RGKGIVSIGWAPQ-LEILAHP 360 (473)
Q Consensus 283 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~-~~~nv~~~~~~pq-~~ll~~~ 360 (473)
.+.|+|++|... .......+++++.... ++.++.+.... ..+.+.+.. +.+|+.+..|+++ .+++..+
T Consensus 157 ~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~~~-------~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~a 226 (282)
T 3hbm_A 157 KYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSSNP-------NLKKLQKFAKLHNNIRLFIDHENIAKLMNES 226 (282)
T ss_dssp CEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTTCT-------THHHHHHHHHTCSSEEEEESCSCHHHHHHTE
T ss_pred CCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCCch-------HHHHHHHHHhhCCCEEEEeCHHHHHHHHHHC
Confidence 458999999764 3345566888886654 56666665422 112222221 2358999999987 5799989
Q ss_pred CcceeeeccCchhHHHHHhhCCceeccccccccccceeeeeecceEEEEecC
Q 036520 361 SIGTSLFHAGWGSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERK 412 (473)
Q Consensus 361 ~~~~~ItHGG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~ 412 (473)
++ +||+|| +|+.|+++.|+|+|++|...+|..||+.+++.|+|+.+..-
T Consensus 227 Dl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~G~~~~~~~~ 275 (282)
T 3hbm_A 227 NK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKKGYEVEYKYL 275 (282)
T ss_dssp EE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHTTCEEECGGG
T ss_pred CE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHCCCEEEcchh
Confidence 88 999999 89999999999999999999999999999999999988753
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.57 E-value=2.1e-15 Score=133.33 Aligned_cols=138 Identities=15% Similarity=0.200 Sum_probs=95.4
Q ss_pred CCCcEEEEeecCcccCCHHHHHHH-----HHHHhcCC-CCEEEEEcCCCCCC-Cc-ccc---------Cchh-------h
Q 036520 281 KPRSVVFVGFGSECKLSKDQVYEI-----AYGLELSG-LPFLWALRKPEWAT-DD-VDA---------LPLG-------F 336 (473)
Q Consensus 281 ~~~~~V~vs~Gs~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~-~~-~~~---------~p~~-------~ 336 (473)
+.+++|||+.||... -.+.+..+ +++|...+ .++++.++...... +. ... +|.. .
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 104 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDTA 104 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTCSC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccccc
Confidence 345699999999842 23433333 48887777 78999888653210 00 000 0100 0
Q ss_pred hh---hcCCCceEEecccch-HHHhh-CCCcceeeeccCchhHHHHHhhCCceeccccc----cccccceeeeeecceEE
Q 036520 337 AD---TIRGKGIVSIGWAPQ-LEILA-HPSIGTSLFHAGWGSVIETLQFGHSLVVLPLI----IDQPLNARLLVDKDLAV 407 (473)
Q Consensus 337 ~~---~~~~~nv~~~~~~pq-~~ll~-~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~v~~~G~G~ 407 (473)
.. ....-++.+.+|+++ .++|+ .+++ +|||||.||+.|++++|+|+|++|.. .||..||+++++.|+|+
T Consensus 105 ~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~ 182 (224)
T 2jzc_A 105 RQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVW 182 (224)
T ss_dssp EEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCC
T ss_pred cccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEE
Confidence 00 001125667788887 58999 9999 99999999999999999999999984 36999999999999987
Q ss_pred EEecCCCCCcCHHHHHHHHHHH
Q 036520 408 QVERKDDGSFTRDGIAKALRLA 429 (473)
Q Consensus 408 ~l~~~~~~~~t~~~l~~~i~~l 429 (473)
.+ +.+.|.++|.++
T Consensus 183 ~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 183 SC--------APTETGLIAGLR 196 (224)
T ss_dssp EE--------CSCTTTHHHHHH
T ss_pred Ec--------CHHHHHHHHHHH
Confidence 65 335666677766
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.52 E-value=3.7e-12 Score=124.52 Aligned_cols=352 Identities=9% Similarity=0.006 Sum_probs=191.2
Q ss_pred CCCccEEEEecC--C--CccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCcccccccc
Q 036520 1 MARKLHVVMLPW--S--AFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDK 76 (473)
Q Consensus 1 m~~~~~vl~~~~--~--~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~ 76 (473)
|.++|||++++. + ..|.-..+..+++.| +||+|++++........... ....++.+..++.
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~----~~~~~~~~~~~~~--------- 65 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAY----DKTLDYEVIRWPR--------- 65 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHH----HTTCSSEEEEESS---------
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhh----ccccceEEEEccc---------
Confidence 888999999875 2 357778899999999 79999999876543210000 0113677777762
Q ss_pred CCCCCCCccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCc--chHHHHHHHcCCCeEE-EecchhHHHHH
Q 036520 77 LLLPEGAEATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMS--HWAGKIAQEYHVPLLL-FSAFSAAAFQF 153 (473)
Q Consensus 77 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~--~~~~~~A~~lgiP~v~-~~~~~~~~~~~ 153 (473)
... .. .. .....+.+++++.+||+|++.... .....+++.+++|.++ ........
T Consensus 66 -~~~--------~~--~~--------~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--- 123 (394)
T 3okp_A 66 -SVM--------LP--TP--------TTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG--- 123 (394)
T ss_dssp -SSC--------CS--CH--------HHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH---
T ss_pred -ccc--------cc--ch--------hhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh---
Confidence 100 00 00 123456778888999999986433 3455668899999544 32211110
Q ss_pred HhchhhhhcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhccccEEEEcCCch
Q 036520 154 IANPECLVGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILHSCQAMAIRSCPE 233 (473)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 233 (473)
+ . . ...............+.+++.|...
T Consensus 124 ---------------------------~---------~--------------~--~~~~~~~~~~~~~~~d~ii~~s~~~ 151 (394)
T 3okp_A 124 ---------------------------W---------S--------------M--LPGSRQSLRKIGTEVDVLTYISQYT 151 (394)
T ss_dssp ---------------------------H---------T--------------T--SHHHHHHHHHHHHHCSEEEESCHHH
T ss_pred ---------------------------h---------h--------------h--cchhhHHHHHHHHhCCEEEEcCHHH
Confidence 0 0 0 0000111234456788888877543
Q ss_pred hhhHHHHHHHhhc--CCCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCccc-CCHHHHHHHHHHHhc
Q 036520 234 FEGEYLNLLEKLT--GKPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECK-LSKDQVYEIAYGLEL 310 (473)
Q Consensus 234 le~~~~~~~~~~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~ 310 (473)
.+ .+.+.. ..++..|..-...............++.+-+.-. ++..+++..|+... -..+.+...+..+.+
T Consensus 152 ~~-----~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 225 (394)
T 3okp_A 152 LR-----RFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFT-DTTPVIACNSRLVPRKGQDSLIKAMPQVIA 225 (394)
T ss_dssp HH-----HHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCC-TTCCEEEEESCSCGGGCHHHHHHHHHHHHH
T ss_pred HH-----HHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCCC-cCceEEEEEeccccccCHHHHHHHHHHHHh
Confidence 33 233322 2345555532211111100011112222223222 23366677787643 123333333333332
Q ss_pred --CCCCEEEEEcCCCCCCCccccCchhhhhhc--CCCceEEecccch---HHHhhCCCcceeee-----------ccCch
Q 036520 311 --SGLPFLWALRKPEWATDDVDALPLGFADTI--RGKGIVSIGWAPQ---LEILAHPSIGTSLF-----------HAGWG 372 (473)
Q Consensus 311 --~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~--~~~nv~~~~~~pq---~~ll~~~~~~~~It-----------HGG~~ 372 (473)
.+.+++++-.+. . .+.+.+.. ..+++.+.+|+|+ ..++..+++ +|. -|.-+
T Consensus 226 ~~~~~~l~i~G~g~-~--------~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~ 294 (394)
T 3okp_A 226 ARPDAQLLIVGSGR-Y--------ESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGI 294 (394)
T ss_dssp HSTTCEEEEECCCT-T--------HHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCH
T ss_pred hCCCeEEEEEcCch-H--------HHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCc
Confidence 245555443221 1 11111111 1358999999976 557888998 665 45567
Q ss_pred hHHHHHhhCCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHH-HHhcc
Q 036520 373 SVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAA-NTFND 451 (473)
Q Consensus 373 s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~-~~~~~ 451 (473)
++.||+++|+|+|+.+..+ ....+.+ |.|..++.. +.++++++|.++++ +++.+++..+-+ +.+.+
T Consensus 295 ~~~Ea~a~G~PvI~~~~~~----~~e~i~~-~~g~~~~~~-----d~~~l~~~i~~l~~---~~~~~~~~~~~~~~~~~~ 361 (394)
T 3okp_A 295 VYLEAQACGVPVIAGTSGG----APETVTP-ATGLVVEGS-----DVDKLSELLIELLD---DPIRRAAMGAAGRAHVEA 361 (394)
T ss_dssp HHHHHHHTTCCEEECSSTT----GGGGCCT-TTEEECCTT-----CHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeCCCC----hHHHHhc-CCceEeCCC-----CHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHH
Confidence 9999999999999976532 2233333 477777654 79999999999999 565544433332 22333
Q ss_pred CCCcHHHHHHHHHHHHHhcc
Q 036520 452 KKLHDDYSVRFVEYLKINVA 471 (473)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~ 471 (473)
.-+.+..++.+.+.+++..+
T Consensus 362 ~~s~~~~~~~~~~~~~~~~r 381 (394)
T 3okp_A 362 EWSWEIMGERLTNILQSEPR 381 (394)
T ss_dssp HTBHHHHHHHHHHHHHSCCC
T ss_pred hCCHHHHHHHHHHHHHHhcc
Confidence 33567777888887776544
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.47 E-value=1.8e-11 Score=121.65 Aligned_cols=349 Identities=13% Similarity=0.067 Sum_probs=175.2
Q ss_pred CCccEEEEecC-----------CCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCcc
Q 036520 2 ARKLHVVMLPW-----------SAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPAS 70 (473)
Q Consensus 2 ~~~~~vl~~~~-----------~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~ 70 (473)
.+.|||++++. ...|+-..+..+++.|.++||+|++++.......... .....+++++.++....
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~----~~~~~~v~v~~~~~~~~ 93 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEI----VRVAENLRVINIAAGPY 93 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSE----EEEETTEEEEEECCSCS
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCccc----ccccCCeEEEEecCCCc
Confidence 45689999985 2357788999999999999999999986543211100 01124777877763211
Q ss_pred ccccccCCCCCCCccCCCCChhhHHHHHHHHhhhhhHHHHH-HHhC-CCcEEEEcCCc--chHHHHHHHcCCCeEEEecc
Q 036520 71 AALDDKLLLPEGAEATVDIPSENIQYLKIAYDLLQHPFKQF-VAQQ-SVDWIIVDVMS--HWAGKIAQEYHVPLLLFSAF 146 (473)
Q Consensus 71 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-l~~~-~pD~vI~D~~~--~~~~~~A~~lgiP~v~~~~~ 146 (473)
..+. .......+... ...+.++ ++.. +||+|++.... ..+..+++.+++|+|.....
T Consensus 94 ------~~~~---------~~~~~~~~~~~----~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~ 154 (438)
T 3c48_A 94 ------EGLS---------KEELPTQLAAF----TGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHT 154 (438)
T ss_dssp ------SSCC---------GGGGGGGHHHH----HHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSS
T ss_pred ------cccc---------hhHHHHHHHHH----HHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecC
Confidence 1110 00111111111 1122233 4444 49999987432 23445778899999876554
Q ss_pred hhHHHHHHhchhhhhcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhccccEE
Q 036520 147 SAAAFQFIANPECLVGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILHSCQAM 226 (473)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (473)
...... . .... . ... ............+...+.+
T Consensus 155 ~~~~~~----~-----------------------~~~~--------~---~~~--------~~~~~~~~~~~~~~~~d~i 188 (438)
T 3c48_A 155 LAAVKN----S-----------------------YRDD--------S---DTP--------ESEARRICEQQLVDNADVL 188 (438)
T ss_dssp CHHHHS----C-----------------------C---------------CCH--------HHHHHHHHHHHHHHHCSEE
T ss_pred Cccccc----c-----------------------cccc--------c---CCc--------chHHHHHHHHHHHhcCCEE
Confidence 321100 0 0000 0 000 0000000112345678888
Q ss_pred EEcCCchhhhHHHHHHHhhcC---CCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcccC-CHHHHH
Q 036520 227 AIRSCPEFEGEYLNLLEKLTG---KPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECKL-SKDQVY 302 (473)
Q Consensus 227 ~~~s~~~le~~~~~~~~~~~~---~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~-~~~~~~ 302 (473)
++.|....+ .+.+.++ .++..|..-.....-..........+.+-+.-. ++..+++..|+.... ..+.+.
T Consensus 189 i~~s~~~~~-----~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~~~-~~~~~i~~~G~~~~~Kg~~~li 262 (438)
T 3c48_A 189 AVNTQEEMQ-----DLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGIP-LHTKVVAFVGRLQPFKGPQVLI 262 (438)
T ss_dssp EESSHHHHH-----HHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHHTTCC-SSSEEEEEESCBSGGGCHHHHH
T ss_pred EEcCHHHHH-----HHHHHhCCChhheEEecCCccccccCCcccchhhhhHHhcCCC-CCCcEEEEEeeecccCCHHHHH
Confidence 887754333 2222221 235555532211111000000000122222211 233667777887531 223333
Q ss_pred HHHHHHhcC--CCCEEEEEcCCCCCCCccccCchhhhhhc----CCCceEEecccch---HHHhhCCCcceeeec----c
Q 036520 303 EIAYGLELS--GLPFLWALRKPEWATDDVDALPLGFADTI----RGKGIVSIGWAPQ---LEILAHPSIGTSLFH----A 369 (473)
Q Consensus 303 ~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~p~~~~~~~----~~~nv~~~~~~pq---~~ll~~~~~~~~ItH----G 369 (473)
..+..+.+. +.++.+.+-+.... .+...+.+.+.. -.+++.+.+++|+ ..++..+++ +|.- |
T Consensus 263 ~a~~~l~~~~p~~~~~l~i~G~~~~---~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~ 337 (438)
T 3c48_A 263 KAVAALFDRDPDRNLRVIICGGPSG---PNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNES 337 (438)
T ss_dssp HHHHHHHHHCTTCSEEEEEECCBC---------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCS
T ss_pred HHHHHHHhhCCCcceEEEEEeCCCC---CCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccC
Confidence 333333221 22333332222100 001111222211 2458999999986 577888998 6643 3
Q ss_pred CchhHHHHHhhCCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHH
Q 036520 370 GWGSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRA 442 (473)
Q Consensus 370 G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a 442 (473)
..+++.||+++|+|+|+.+. ......+++.+.|..++.. +.++++++|.++++ +++.+++.
T Consensus 338 ~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~~~g~~~~~~-----d~~~la~~i~~l~~---~~~~~~~~ 398 (438)
T 3c48_A 338 FGLVAMEAQASGTPVIAARV----GGLPIAVAEGETGLLVDGH-----SPHAWADALATLLD---DDETRIRM 398 (438)
T ss_dssp SCHHHHHHHHTTCCEEEESC----TTHHHHSCBTTTEEEESSC-----CHHHHHHHHHHHHH---CHHHHHHH
T ss_pred CchHHHHHHHcCCCEEecCC----CChhHHhhCCCcEEECCCC-----CHHHHHHHHHHHHc---CHHHHHHH
Confidence 34689999999999999764 3344455555678777654 78999999999999 66554443
No 27
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.46 E-value=2.6e-11 Score=119.09 Aligned_cols=345 Identities=13% Similarity=0.025 Sum_probs=181.7
Q ss_pred CCCccEEEEecCC---C-ccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCcccccccc
Q 036520 1 MARKLHVVMLPWS---A-FGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDK 76 (473)
Q Consensus 1 m~~~~~vl~~~~~---~-~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~ 76 (473)
|.++|||+++... . .|.-..+..+++.|.++||+|++++............ ...+ ++..++. .
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~----~~~~-~~~~~~~--~------ 83 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYV----VSGG-KAVPIPY--N------ 83 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTE----EECC-CCC-------------
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCccc----ccCC-cEEeccc--c------
Confidence 3567999998753 2 4666789999999999999999999765432111100 0001 1111110 0
Q ss_pred CCCCCCCccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCc--chHHHHHHHcCCCeEEEecchhHHHHHH
Q 036520 77 LLLPEGAEATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMS--HWAGKIAQEYHVPLLLFSAFSAAAFQFI 154 (473)
Q Consensus 77 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 154 (473)
.. ...... .......+.+++++.+||+|++.... ..+..+++..++|+|.........
T Consensus 84 ~~-------~~~~~~---------~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~---- 143 (406)
T 2gek_A 84 GS-------VARLRF---------GPATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTK---- 143 (406)
T ss_dssp --------------C---------CHHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCS----
T ss_pred CC-------cccccc---------cHHHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchh----
Confidence 00 000000 00122456777888899999987533 235567788899998765431100
Q ss_pred hchhhhhcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhccccEEEEcCCchh
Q 036520 155 ANPECLVGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILHSCQAMAIRSCPEF 234 (473)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 234 (473)
. .+... ....+.......+.+++.|....
T Consensus 144 -------------------------~----------------~~~~~----------~~~~~~~~~~~~d~ii~~s~~~~ 172 (406)
T 2gek_A 144 -------------------------S----------------LTLSV----------FQGILRPYHEKIIGRIAVSDLAR 172 (406)
T ss_dssp -------------------------H----------------HHHHH----------HHSTTHHHHTTCSEEEESSHHHH
T ss_pred -------------------------h----------------hhHHH----------HHHHHHHHHhhCCEEEECCHHHH
Confidence 0 00000 00001144567778877774332
Q ss_pred hhHHHHHHHhhcCCCeEEeeccCCCCCCCCCCCCchhhhhccc--cCCCCCcEEEEeecCc-cc-CCHHHHHHHHHHHhc
Q 036520 235 EGEYLNLLEKLTGKPVIPVGLLTPEPNSAKGRDHQISKIFQWL--DEQKPRSVVFVGFGSE-CK-LSKDQVYEIAYGLEL 310 (473)
Q Consensus 235 e~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~V~vs~Gs~-~~-~~~~~~~~~~~al~~ 310 (473)
+ .+.+.++.+-..|..-... +.+..-- ....++..+++..|+. .. -..+.+...+..+.+
T Consensus 173 ~-----~~~~~~~~~~~vi~~~v~~-----------~~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~ 236 (406)
T 2gek_A 173 R-----WQMEALGSDAVEIPNGVDV-----------ASFADAPLLDGYPREGRTVLFLGRYDEPRKGMAVLLAALPKLVA 236 (406)
T ss_dssp H-----HHHHHHSSCEEECCCCBCH-----------HHHHTCCCCTTCSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHT
T ss_pred H-----HHHHhcCCCcEEecCCCCh-----------hhcCCCchhhhccCCCeEEEEEeeeCccccCHHHHHHHHHHHHH
Confidence 2 2223333322244321110 0000000 0001122566667877 43 223333333444433
Q ss_pred --CCCCEEEEEcCCCCCCCccccCchhhhhhcC--CCceEEecccch---HHHhhCCCcceeee----ccCc-hhHHHHH
Q 036520 311 --SGLPFLWALRKPEWATDDVDALPLGFADTIR--GKGIVSIGWAPQ---LEILAHPSIGTSLF----HAGW-GSVIETL 378 (473)
Q Consensus 311 --~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~--~~nv~~~~~~pq---~~ll~~~~~~~~It----HGG~-~s~~eal 378 (473)
.+.+++++-.+. . +.+.+..+ .+++.+.+++++ ..++..+++ +|. +.|+ +++.||+
T Consensus 237 ~~~~~~l~i~G~~~---------~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~ 304 (406)
T 2gek_A 237 RFPDVEILIVGRGD---------E-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAM 304 (406)
T ss_dssp TSTTCEEEEESCSC---------H-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHH
T ss_pred HCCCeEEEEEcCCc---------H-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHH
Confidence 244444432221 1 22222222 468999999987 588889998 553 3444 5899999
Q ss_pred hhCCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHH
Q 036520 379 QFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDY 458 (473)
Q Consensus 379 ~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 458 (473)
++|+|+|+.+.. .....+++.+.|..++.. +.++++++|.++++ +++.++++.+-+......-+.+..
T Consensus 305 a~G~PvI~~~~~----~~~e~i~~~~~g~~~~~~-----d~~~l~~~i~~l~~---~~~~~~~~~~~~~~~~~~~s~~~~ 372 (406)
T 2gek_A 305 AAGTAVVASDLD----AFRRVLADGDAGRLVPVD-----DADGMAAALIGILE---DDQLRAGYVARASERVHRYDWSVV 372 (406)
T ss_dssp HHTCEEEECCCH----HHHHHHTTTTSSEECCTT-----CHHHHHHHHHHHHH---CHHHHHHHHHHHHHHGGGGBHHHH
T ss_pred HcCCCEEEecCC----cHHHHhcCCCceEEeCCC-----CHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHhCCHHHH
Confidence 999999998762 333444444567666544 78999999999998 666555544433333334455666
Q ss_pred HHHHHHHHHHh
Q 036520 459 SVRFVEYLKIN 469 (473)
Q Consensus 459 ~~~~~~~~~~~ 469 (473)
++.+.+.+...
T Consensus 373 ~~~~~~~~~~~ 383 (406)
T 2gek_A 373 SAQIMRVYETV 383 (406)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 67777766553
No 28
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.40 E-value=6.6e-10 Score=108.66 Aligned_cols=348 Identities=12% Similarity=0.074 Sum_probs=183.0
Q ss_pred cEEEEecCCCc-cChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCCC
Q 036520 5 LHVVMLPWSAF-GHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEGA 83 (473)
Q Consensus 5 ~~vl~~~~~~~-gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~~ 83 (473)
+++....+|.. |.-..+..+++.|+++||+|++++....... .. ...++.+..++.+.. +.
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~-~~------~~~~i~~~~~~~~~~---------~~-- 77 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRL-NK------VYPNIYFHEVTVNQY---------SV-- 77 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----C------CCTTEEEECCCCC---------------
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc-cc------cCCceEEEecccccc---------cc--
Confidence 35666666644 6667888999999999999999987532211 11 124677766552211 10
Q ss_pred ccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCcc--hHHHHHH-Hc--CCCeEEEecchhHHHHHHhchh
Q 036520 84 EATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMSH--WAGKIAQ-EY--HVPLLLFSAFSAAAFQFIANPE 158 (473)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~--~~~~~A~-~l--giP~v~~~~~~~~~~~~~~~~~ 158 (473)
....... + .....+.+++++.+||+|++..... .+..++. .+ ++|+|......... ..
T Consensus 78 --~~~~~~~----~-----~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~------~~ 140 (394)
T 2jjm_A 78 --FQYPPYD----L-----ALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT------VL 140 (394)
T ss_dssp --CCSCCHH----H-----HHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH------TT
T ss_pred --ccccccc----H-----HHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc------cc
Confidence 0011100 0 1233466777888999999874332 2233444 33 59988764432110 00
Q ss_pred hhhcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhccccEEEEcCCchhhhHH
Q 036520 159 CLVGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILHSCQAMAIRSCPEFEGEY 238 (473)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~ 238 (473)
.. ...+. ......+...+.+++.|....+
T Consensus 141 ---------------------~~-------------------------~~~~~--~~~~~~~~~ad~ii~~s~~~~~--- 169 (394)
T 2jjm_A 141 ---------------------GS-------------------------DPSLN--NLIRFGIEQSDVVTAVSHSLIN--- 169 (394)
T ss_dssp ---------------------TT-------------------------CTTTH--HHHHHHHHHSSEEEESCHHHHH---
T ss_pred ---------------------CC-------------------------CHHHH--HHHHHHHhhCCEEEECCHHHHH---
Confidence 00 00000 1122345667888887754322
Q ss_pred HHHHHhhcC--CCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhc----CC
Q 036520 239 LNLLEKLTG--KPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLEL----SG 312 (473)
Q Consensus 239 ~~~~~~~~~--~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~----~~ 312 (473)
.+.+.++ .++..|..-....... +....++.+-+.-. ++..+++..|+... ...+..+++++.. .+
T Consensus 170 --~~~~~~~~~~~~~vi~ngv~~~~~~---~~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~ 241 (394)
T 2jjm_A 170 --ETHELVKPNKDIQTVYNFIDERVYF---KRDMTQLKKEYGIS-ESEKILIHISNFRK--VKRVQDVVQAFAKIVTEVD 241 (394)
T ss_dssp --HHHHHTCCSSCEEECCCCCCTTTCC---CCCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSC
T ss_pred --HHHHhhCCcccEEEecCCccHHhcC---CcchHHHHHHcCCC-CCCeEEEEeecccc--ccCHHHHHHHHHHHHhhCC
Confidence 2333332 3566665322111111 11112222222211 12256666787653 2333444444432 34
Q ss_pred CCEEEEEcCCCCCCCccccCchhhhhhcC----CCceEEecccch-HHHhhCCCcceee----eccCchhHHHHHhhCCc
Q 036520 313 LPFLWALRKPEWATDDVDALPLGFADTIR----GKGIVSIGWAPQ-LEILAHPSIGTSL----FHAGWGSVIETLQFGHS 383 (473)
Q Consensus 313 ~~~i~~~~~~~~~~~~~~~~p~~~~~~~~----~~nv~~~~~~pq-~~ll~~~~~~~~I----tHGG~~s~~eal~~GvP 383 (473)
.++++ ++.+.. .+.+.+..+ .+++.+.++..+ ..++..+++ +| .-|..+++.||+++|+|
T Consensus 242 ~~l~i-~G~g~~--------~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~P 310 (394)
T 2jjm_A 242 AKLLL-VGDGPE--------FCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVP 310 (394)
T ss_dssp CEEEE-ECCCTT--------HHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCC
T ss_pred CEEEE-ECCchH--------HHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCC
Confidence 44444 332211 111211111 347888887654 789999998 77 45666899999999999
Q ss_pred eeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHH-HHhccCCCcHHHHHHH
Q 036520 384 LVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAA-NTFNDKKLHDDYSVRF 462 (473)
Q Consensus 384 ~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~-~~~~~~~~~~~~~~~~ 462 (473)
+|+.+.. .....+++.+.|..++.. +.++++++|.++++ +++.+++..+-+ +.+.+.-+.+..++.+
T Consensus 311 vI~~~~~----~~~e~v~~~~~g~~~~~~-----d~~~la~~i~~l~~---~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 378 (394)
T 2jjm_A 311 CIGTRVG----GIPEVIQHGDTGYLCEVG-----DTTGVADQAIQLLK---DEELHRNMGERARESVYEQFRSEKIVSQY 378 (394)
T ss_dssp EEEECCT----TSTTTCCBTTTEEEECTT-----CHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred EEEecCC----ChHHHhhcCCceEEeCCC-----CHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 9987653 334445555678777654 78999999999999 665544433322 2232344556666777
Q ss_pred HHHHHHh
Q 036520 463 VEYLKIN 469 (473)
Q Consensus 463 ~~~~~~~ 469 (473)
++.+++.
T Consensus 379 ~~~~~~~ 385 (394)
T 2jjm_A 379 ETIYYDV 385 (394)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 7666543
No 29
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.38 E-value=6.5e-11 Score=117.35 Aligned_cols=390 Identities=11% Similarity=0.002 Sum_probs=191.7
Q ss_pred CccEEEEecCC-----CccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCC------CCC------CcccCCCeEEEEe
Q 036520 3 RKLHVVMLPWS-----AFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPK------PAP------ESEVAALINFVEF 65 (473)
Q Consensus 3 ~~~~vl~~~~~-----~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~------~~~------~~~~~~~i~~~~i 65 (473)
|+|||++++.. ..|--..+..+++.|+++||+|+++++......-.. .+. ......++.++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 58999998843 335555689999999999999999995432211000 000 0002246777777
Q ss_pred cCCccccccccCCCCCCCccCCCCChhhHHHHHHHHhhhhhHHHHHHH-hCCCcEEEEcCCc--chHHHHHHHcCCCeEE
Q 036520 66 PLPASAALDDKLLLPEGAEATVDIPSENIQYLKIAYDLLQHPFKQFVA-QQSVDWIIVDVMS--HWAGKIAQEYHVPLLL 142 (473)
Q Consensus 66 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~-~~~pD~vI~D~~~--~~~~~~A~~lgiP~v~ 142 (473)
+.+.. .. . .............+..........+..+++ ..+||+|.+.... ..+..+++..++|+|.
T Consensus 81 ~~~~~------~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~ 150 (439)
T 3fro_A 81 GGGLL------DS---E-DVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVF 150 (439)
T ss_dssp ESGGG------GC---S-STTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEE
T ss_pred cchhc------cc---c-ccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEE
Confidence 62000 00 0 000000001011111122222333333332 5699999987533 2345667889999987
Q ss_pred EecchhHHHHHHhchhhhhcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHHhhcc
Q 036520 143 FSAFSAAAFQFIANPECLVGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAEILHS 222 (473)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (473)
........ ..+. . .+....+... . ...........+..
T Consensus 151 ~~h~~~~~------------------------------~~~~--~-~~~~~~~~~~------~---~~~~~~~~~~~~~~ 188 (439)
T 3fro_A 151 TIHRLNKS------------------------------KLPA--F-YFHEAGLSEL------A---PYPDIDPEHTGGYI 188 (439)
T ss_dssp EESCCCCC------------------------------CEEH--H-HHHHTTCGGG------C---CSSEECHHHHHHHH
T ss_pred Eecccccc------------------------------cCch--H-HhCccccccc------c---ccceeeHhhhhhhh
Confidence 65532210 0000 0 0000000000 0 00000123344567
Q ss_pred ccEEEEcCCchhhhHHHHHHHhhcCCCeEEeeccCCCCCCCCC-----CCCchhhhhccccCCCCCcEEEEeecCcc-c-
Q 036520 223 CQAMAIRSCPEFEGEYLNLLEKLTGKPVIPVGLLTPEPNSAKG-----RDHQISKIFQWLDEQKPRSVVFVGFGSEC-K- 295 (473)
Q Consensus 223 ~~~~~~~s~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~-~- 295 (473)
.+.+++.|....+.. .... ...+.++..|..-.....-... ......++.+-+.-. ++ .+++..|+.. .
T Consensus 189 ad~ii~~S~~~~~~~-~~~~-~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~i~~~G~~~~~~ 264 (439)
T 3fro_A 189 ADIVTTVSRGYLIDE-WGFF-RNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMD-EG-VTFMFIGRFDRGQ 264 (439)
T ss_dssp CSEEEESCHHHHHHT-HHHH-GGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTCC-SC-EEEEEECCSSCTT
T ss_pred ccEEEecCHHHHHHH-hhhh-hhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCCC-CC-cEEEEEccccccc
Confidence 888888776544321 1111 1123455555432211100000 000112222222222 23 7777788876 3
Q ss_pred CCHHHHHHHHHHHhc----CCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchH---HHhhCCCcceeeec
Q 036520 296 LSKDQVYEIAYGLEL----SGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQL---EILAHPSIGTSLFH 368 (473)
Q Consensus 296 ~~~~~~~~~~~al~~----~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~---~ll~~~~~~~~ItH 368 (473)
-..+.+.+.+..+.. .+.+++++ +.+. . .....-..+.+... +++.+.+|+++. .++..+++ +|.-
T Consensus 265 Kg~~~li~a~~~l~~~~~~~~~~l~i~-G~g~-~--~~~~~l~~~~~~~~-~~~~~~g~~~~~~~~~~~~~adv--~v~p 337 (439)
T 3fro_A 265 KGVDVLLKAIEILSSKKEFQEMRFIII-GKGD-P--ELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDF--VIIP 337 (439)
T ss_dssp BCHHHHHHHHHHHHTSGGGGGEEEEEE-CCCC-H--HHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSE--EEEC
T ss_pred ccHHHHHHHHHHHHhcccCCCeEEEEE-cCCC-h--hHHHHHHHHHhhcC-CEEEEcCCCCHHHHHHHHHHCCE--EEeC
Confidence 234555555555544 23344433 2221 0 00000011112222 466678889884 56788888 5532
Q ss_pred ----cCchhHHHHHhhCCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhc-Cc-chHHHHHHH
Q 036520 369 ----AGWGSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATV-SE-EGEKLRVRA 442 (473)
Q Consensus 369 ----GG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~-~~-~~~~~~~~a 442 (473)
|-.+++.||+++|+|+|+.... .....++ .|.|..++.. +.++++++|.++++ +. .-..+.+++
T Consensus 338 s~~e~~~~~~~EAma~G~Pvi~s~~~----~~~e~~~-~~~g~~~~~~-----d~~~la~~i~~ll~~~~~~~~~~~~~~ 407 (439)
T 3fro_A 338 SYFEPFGLVALEAMCLGAIPIASAVG----GLRDIIT-NETGILVKAG-----DPGELANAILKALELSRSDLSKFRENC 407 (439)
T ss_dssp BSCCSSCHHHHHHHHTTCEEEEESST----HHHHHCC-TTTCEEECTT-----CHHHHHHHHHHHHHHTTTTTHHHHHHH
T ss_pred CCCCCccHHHHHHHHCCCCeEEcCCC----CcceeEE-cCceEEeCCC-----CHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3347999999999999997543 2333332 4578777754 78999999999997 31 123455555
Q ss_pred HHHHHHhccCCCcHHHHHHHHHHHHHh
Q 036520 443 REAANTFNDKKLHDDYSVRFVEYLKIN 469 (473)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (473)
++..+ .-+.+..++.+.+.++..
T Consensus 408 ~~~~~----~~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 408 KKRAM----SFSWEKSAERYVKAYTGS 430 (439)
T ss_dssp HHHHH----TSCHHHHHHHHHHHHHTC
T ss_pred HHHHh----hCcHHHHHHHHHHHHHHH
Confidence 55443 234566677777766654
No 30
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.38 E-value=2.9e-11 Score=122.30 Aligned_cols=387 Identities=14% Similarity=0.059 Sum_probs=189.6
Q ss_pred CCCccEEEEecCC---------------CccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCC-Cccc--CCCeEE
Q 036520 1 MARKLHVVMLPWS---------------AFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAP-ESEV--AALINF 62 (473)
Q Consensus 1 m~~~~~vl~~~~~---------------~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~-~~~~--~~~i~~ 62 (473)
|.++|||++++.. ..|.-..+..+++.|+++||+|++++............. .... ..++++
T Consensus 4 m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v 83 (499)
T 2r60_A 4 MTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRI 83 (499)
T ss_dssp ---CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEE
T ss_pred ccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEE
Confidence 6778999998852 346677899999999999999999986432211000000 0001 247888
Q ss_pred EEecCCccccccccCCCCCCCccCCCCChhhHHHHHHHHhhhhhHHHHHHHh--CCCcEEEEcCCc--chHHHHHHHcCC
Q 036520 63 VEFPLPASAALDDKLLLPEGAEATVDIPSENIQYLKIAYDLLQHPFKQFVAQ--QSVDWIIVDVMS--HWAGKIAQEYHV 138 (473)
Q Consensus 63 ~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~--~~pD~vI~D~~~--~~~~~~A~~lgi 138 (473)
+.++.... .... ....+..+. .....+.+++++ .+||+|.+.... ..+..+++.+++
T Consensus 84 ~~~~~~~~------~~~~---------~~~~~~~~~----~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~ 144 (499)
T 2r60_A 84 VRIPFGGD------KFLP---------KEELWPYLH----EYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGL 144 (499)
T ss_dssp EEECCSCS------SCCC---------GGGCGGGHH----HHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCC
T ss_pred EEecCCCc------CCcC---------HHHHHHHHH----HHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCC
Confidence 88863211 0000 000111111 112345566666 589999987432 234457788999
Q ss_pred CeEEEecchhHHHHHHhchhhhhcCCCCCCCCCCccccCCCccccCCCccccccccccccccccccCCCCchhhHHHHHH
Q 036520 139 PLLLFSAFSAAAFQFIANPECLVGDGQKRVRPSAESLTSVPEWVDFPSSVALRTFDAIGMHHGFYGMNASGITDAHRTAE 218 (473)
Q Consensus 139 P~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (473)
|+|................ .... ...+...+ ...........
T Consensus 145 p~v~~~H~~~~~~~~~~~~----------------------~~~~--------~~~~~~~~--------~~~~~~~~~~~ 186 (499)
T 2r60_A 145 PFTFTGHSLGAQKMEKLNV----------------------NTSN--------FKEMDERF--------KFHRRIIAERL 186 (499)
T ss_dssp CEEEECSSCHHHHHHTTCC----------------------CSTT--------SHHHHHHH--------CHHHHHHHHHH
T ss_pred cEEEEccCcccccchhhcc----------------------CCCC--------cchhhhhH--------HHHHHHHHHHH
Confidence 9987655433211100000 0000 00000000 00000001134
Q ss_pred hhccccEEEEcCCchhhhHHHHHHHhh--cC--------CCeEEeeccCCCCCCCCCCCCc---hhhhhcccc----CCC
Q 036520 219 ILHSCQAMAIRSCPEFEGEYLNLLEKL--TG--------KPVIPVGLLTPEPNSAKGRDHQ---ISKIFQWLD----EQK 281 (473)
Q Consensus 219 ~~~~~~~~~~~s~~~le~~~~~~~~~~--~~--------~~~~~vGp~~~~~~~~~~~~~~---~~~~~~~l~----~~~ 281 (473)
.+...+.+++.|....+ .+.+. ++ .++..|..-.....-.. ... ..++.+-+. ..+
T Consensus 187 ~~~~ad~vi~~S~~~~~-----~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~--~~~~~~~~~~r~~~~~~~~~~~ 259 (499)
T 2r60_A 187 TMSYADKIIVSTSQERF-----GQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDG--EYGDKIKAKITKYLERDLGSER 259 (499)
T ss_dssp HHHHCSEEEESSHHHHH-----HTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSS--CCCHHHHHHHHHHHHHHSCGGG
T ss_pred HHhcCCEEEECCHHHHH-----HHHhhhcccccccccCCCCeEEECCCcChhhcCc--cchhhhHHHHHHHhcccccccC
Confidence 45678888887754322 12222 21 23555442211110000 000 012222111 011
Q ss_pred CCcEEEEeecCcccCCHHHHHHHHHHHhcCCC----C-EEEEEcCCCCCCCccccC-------chhhhhhc----CCCce
Q 036520 282 PRSVVFVGFGSECKLSKDQVYEIAYGLELSGL----P-FLWALRKPEWATDDVDAL-------PLGFADTI----RGKGI 345 (473)
Q Consensus 282 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~~~-------p~~~~~~~----~~~nv 345 (473)
++..+++..|+.. ....+..+++++..... . .+++++.......+-..+ -+.+.+.. -.+++
T Consensus 260 ~~~~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V 337 (499)
T 2r60_A 260 MELPAIIASSRLD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKV 337 (499)
T ss_dssp TTSCEEEECSCCC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTE
T ss_pred CCCcEEEEeecCc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceE
Confidence 1225666678764 34556667777765421 2 344455411000000001 11122211 24589
Q ss_pred EEecccch---HHHhhCC----Ccceeeec----cCchhHHHHHhhCCceeccccccccccceeeeeecceEEEEecCCC
Q 036520 346 VSIGWAPQ---LEILAHP----SIGTSLFH----AGWGSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDD 414 (473)
Q Consensus 346 ~~~~~~pq---~~ll~~~----~~~~~ItH----GG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~ 414 (473)
.+.+++|+ ..++..+ ++ +|.- |--.++.||+++|+|+|+....+ ....+.+.+.|..++..
T Consensus 338 ~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g----~~e~v~~~~~g~l~~~~-- 409 (499)
T 2r60_A 338 SMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRNGG----PAEILDGGKYGVLVDPE-- 409 (499)
T ss_dssp EEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESSBH----HHHHTGGGTSSEEECTT--
T ss_pred EECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecCCC----HHHHhcCCceEEEeCCC--
Confidence 99999976 5677888 87 6632 33368999999999999986532 22333333467777654
Q ss_pred CCcCHHHHHHHHHHHhcCcchHHHHHHHHHHH-HHhccCCCcHHHHHHHHHHHH
Q 036520 415 GSFTRDGIAKALRLATVSEEGEKLRVRAREAA-NTFNDKKLHDDYSVRFVEYLK 467 (473)
Q Consensus 415 ~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~ 467 (473)
+.++++++|.++++ +++.+++..+-+ +.+.+.-+.+..++.+.+.+.
T Consensus 410 ---d~~~la~~i~~ll~---~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~ 457 (499)
T 2r60_A 410 ---DPEDIARGLLKAFE---SEETWSAYQEKGKQRVEERYTWQETARGYLEVIQ 457 (499)
T ss_dssp ---CHHHHHHHHHHHHS---CHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 78999999999999 665544433322 222222344555555555443
No 31
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.33 E-value=8.5e-12 Score=121.38 Aligned_cols=137 Identities=13% Similarity=0.151 Sum_probs=87.1
Q ss_pred CcEEEEeecCcccCCHHHHHHHHHHHhc-----CCCCEEEEEcCCCCCCCccccCchhhhhhc-CCCceEEecccch---
Q 036520 283 RSVVFVGFGSECKLSKDQVYEIAYGLEL-----SGLPFLWALRKPEWATDDVDALPLGFADTI-RGKGIVSIGWAPQ--- 353 (473)
Q Consensus 283 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~-~~~nv~~~~~~pq--- 353 (473)
++.|+++.|...... .+..+++++.. .+..+++..+.+. .+-+.+.+.. ..+++.+.+++++
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~-------~~~~~l~~~~~~~~~v~~~g~~g~~~~ 268 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP-------VVREAVFPVLKGVRNFVLLDPLEYGSM 268 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH-------HHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH-------HHHHHHHHHhccCCCEEEECCCCHHHH
Confidence 447777777553221 34445555543 2455554434221 0111222221 2358999866554
Q ss_pred HHHhhCCCcceeeeccCchhHHHHHhhCCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCc
Q 036520 354 LEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSE 433 (473)
Q Consensus 354 ~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~ 433 (473)
.++|+.+++ ||+.+| |.+.||+++|+|+|+.+..+++.. +.+.|.|+.+. .+.++|+++|.++++
T Consensus 269 ~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~g~g~lv~------~d~~~la~~i~~ll~-- 333 (376)
T 1v4v_A 269 AALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKAGILKLAG------TDPEGVYRVVKGLLE-- 333 (376)
T ss_dssp HHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHHTSEEECC------SCHHHHHHHHHHHHT--
T ss_pred HHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcCCceEECC------CCHHHHHHHHHHHHh--
Confidence 588988888 998873 456699999999999876666555 24567887663 278999999999999
Q ss_pred chHHHHHHHHH
Q 036520 434 EGEKLRVRARE 444 (473)
Q Consensus 434 ~~~~~~~~a~~ 444 (473)
|++.++++.+
T Consensus 334 -d~~~~~~~~~ 343 (376)
T 1v4v_A 334 -NPEELSRMRK 343 (376)
T ss_dssp -CHHHHHHHHH
T ss_pred -ChHhhhhhcc
Confidence 7766665554
No 32
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.29 E-value=7.7e-12 Score=122.53 Aligned_cols=162 Identities=10% Similarity=0.074 Sum_probs=98.5
Q ss_pred CCcEEEEeecCcccCCHHHHHHHHHHHhc-----CCCCEEEEEcCCCCCCCccccCchhhhhhc-CCCceEEecccch--
Q 036520 282 PRSVVFVGFGSECKLSKDQVYEIAYGLEL-----SGLPFLWALRKPEWATDDVDALPLGFADTI-RGKGIVSIGWAPQ-- 353 (473)
Q Consensus 282 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~-~~~nv~~~~~~pq-- 353 (473)
+++.++++.|...... +.+..+++++.. .+.++++..+... ..-+...+.. ..+++.+.+++++
T Consensus 223 ~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~-------~~~~~l~~~~~~~~~v~l~~~l~~~~ 294 (403)
T 3ot5_A 223 DNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLNP-------AVREKAMAILGGHERIHLIEPLDAID 294 (403)
T ss_dssp TCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSCH-------HHHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred CCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCCH-------HHHHHHHHHhCCCCCEEEeCCCCHHH
Confidence 3457777766432211 124555555543 3556666543210 0011111111 2358999998863
Q ss_pred -HHHhhCCCcceeeeccCchhHHHHHhhCCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcC
Q 036520 354 -LEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVS 432 (473)
Q Consensus 354 -~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~ 432 (473)
..+++.+++ +|+..|. .+.||.++|+|+|++|-..+++. +.+.|.|+.+. .+.++|.+++.++++
T Consensus 295 ~~~l~~~ad~--vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e----~v~~g~~~lv~------~d~~~l~~ai~~ll~- 360 (403)
T 3ot5_A 295 FHNFLRKSYL--VFTDSGG-VQEEAPGMGVPVLVLRDTTERPE----GIEAGTLKLIG------TNKENLIKEALDLLD- 360 (403)
T ss_dssp HHHHHHHEEE--EEECCHH-HHHHGGGTTCCEEECCSSCSCHH----HHHHTSEEECC------SCHHHHHHHHHHHHH-
T ss_pred HHHHHHhcCE--EEECCcc-HHHHHHHhCCCEEEecCCCcchh----heeCCcEEEcC------CCHHHHHHHHHHHHc-
Confidence 678888888 9988753 33699999999999976666554 24678776653 278999999999999
Q ss_pred cchHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHH
Q 036520 433 EEGEKLRVRAREAANTFNDKKLHDDYSVRFVEYLK 467 (473)
Q Consensus 433 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (473)
+++.++++.+.+..+.+...+++.++.+.+++.
T Consensus 361 --~~~~~~~m~~~~~~~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 361 --NKESHDKMAQAANPYGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp --CHHHHHHHHHSCCTTCCSCHHHHHHHHHHHHHT
T ss_pred --CHHHHHHHHhhcCcccCCcHHHHHHHHHHHHhC
Confidence 777777665544444334444455555555443
No 33
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.26 E-value=1.1e-11 Score=121.37 Aligned_cols=140 Identities=16% Similarity=0.142 Sum_probs=86.8
Q ss_pred CcEEEEeecCcccCCHHHHHHHHHHHhc-----CCCCEEEEEcCCCCCCCccccCchhhhhhc-CCCceEEecccc---h
Q 036520 283 RSVVFVGFGSECKLSKDQVYEIAYGLEL-----SGLPFLWALRKPEWATDDVDALPLGFADTI-RGKGIVSIGWAP---Q 353 (473)
Q Consensus 283 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~-~~~nv~~~~~~p---q 353 (473)
+++|+++.+-...... .+..+++++.. .+.++++..+.+. ..-+...+.. ..+++.+.++++ .
T Consensus 230 ~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~~-------~~~~~l~~~~~~~~~v~~~~~lg~~~~ 301 (396)
T 3dzc_A 230 KKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLNP-------NVREPVNKLLKGVSNIVLIEPQQYLPF 301 (396)
T ss_dssp SEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBCH-------HHHHHHHHHTTTCTTEEEECCCCHHHH
T ss_pred CCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCCh-------HHHHHHHHHHcCCCCEEEeCCCCHHHH
Confidence 4577776532222222 24566666643 3556665543210 0111111111 235898877775 3
Q ss_pred HHHhhCCCcceeeeccCchhHHHHHhhCCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCc
Q 036520 354 LEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSE 433 (473)
Q Consensus 354 ~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~ 433 (473)
..+++.+++ +|+-.| |.+.||.++|+|+|+..-..+++ .+.+.|.++.+. .+.++|.+++.++++
T Consensus 302 ~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~G~~~lv~------~d~~~l~~ai~~ll~-- 366 (396)
T 3dzc_A 302 VYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAAGTVKLVG------TNQQQICDALSLLLT-- 366 (396)
T ss_dssp HHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHHTSEEECT------TCHHHHHHHHHHHHH--
T ss_pred HHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHcCceEEcC------CCHHHHHHHHHHHHc--
Confidence 678889998 999987 66689999999999975444443 245668775442 268999999999999
Q ss_pred chHHHHHHHHHHH
Q 036520 434 EGEKLRVRAREAA 446 (473)
Q Consensus 434 ~~~~~~~~a~~~~ 446 (473)
+++.++++.+.+
T Consensus 367 -d~~~~~~m~~~~ 378 (396)
T 3dzc_A 367 -DPQAYQAMSQAH 378 (396)
T ss_dssp -CHHHHHHHHTSC
T ss_pred -CHHHHHHHhhcc
Confidence 777776555443
No 34
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.25 E-value=4.4e-11 Score=116.58 Aligned_cols=158 Identities=13% Similarity=0.122 Sum_probs=94.0
Q ss_pred CcEEEEeecCcccCCHHHHHHHHHHHhc-----CCCCEEEEEcCCCCCCCccccCchhhhhhc-CCCceEEecccch---
Q 036520 283 RSVVFVGFGSECKLSKDQVYEIAYGLEL-----SGLPFLWALRKPEWATDDVDALPLGFADTI-RGKGIVSIGWAPQ--- 353 (473)
Q Consensus 283 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~-~~~nv~~~~~~pq--- 353 (473)
++.|+++.|...... +.+..+++++.. .+.++++..+.+. ..-+...+.. ..+++.+.+++++
T Consensus 205 ~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~-------~~~~~l~~~~~~~~~v~~~g~~~~~~~ 276 (384)
T 1vgv_A 205 KKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP-------NVREPVNRILGHVKNVILIDPQEYLPF 276 (384)
T ss_dssp SEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH-------HHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH-------HHHHHHHHHhhcCCCEEEeCCCCHHHH
Confidence 457888888765322 234445555533 2444554323210 0111122211 1358999776664
Q ss_pred HHHhhCCCcceeeeccCchhHHHHHhhCCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCc
Q 036520 354 LEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSE 433 (473)
Q Consensus 354 ~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~ 433 (473)
.++++.+++ ||+.+|. ++.||+++|+|+|+.+..++.. .+.+.|.|+.++. +.++|+++|.++++
T Consensus 277 ~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~----e~v~~g~g~lv~~------d~~~la~~i~~ll~-- 341 (384)
T 1vgv_A 277 VWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERP----EAVTAGTVRLVGT------DKQRIVEEVTRLLK-- 341 (384)
T ss_dssp HHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSCH----HHHHHTSEEEECS------SHHHHHHHHHHHHH--
T ss_pred HHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCcc----hhhhCCceEEeCC------CHHHHHHHHHHHHh--
Confidence 677899998 9988754 4889999999999998744332 2445688877742 78999999999999
Q ss_pred chHHHHHHHHHHHHHhccCCCcHHHHHHHHH
Q 036520 434 EGEKLRVRAREAANTFNDKKLHDDYSVRFVE 464 (473)
Q Consensus 434 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 464 (473)
|++.++++.+-+..+.+....+..++.+.+
T Consensus 342 -d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 371 (384)
T 1vgv_A 342 -DENEYQAMSRAHNPYGDGQACSRILEALKN 371 (384)
T ss_dssp -CHHHHHHHHSSCCTTCCSCHHHHHHHHHHH
T ss_pred -ChHHHhhhhhccCCCcCCCHHHHHHHHHHH
Confidence 776665544333333222233334444443
No 35
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.25 E-value=2e-09 Score=104.22 Aligned_cols=139 Identities=14% Similarity=0.176 Sum_probs=89.2
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHhcCCC----CE-EEEEcCCCCCCCccccCchhhhhhc-CCCceEEecccch-HHH
Q 036520 284 SVVFVGFGSECKLSKDQVYEIAYGLELSGL----PF-LWALRKPEWATDDVDALPLGFADTI-RGKGIVSIGWAPQ-LEI 356 (473)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~----~~-i~~~~~~~~~~~~~~~~p~~~~~~~-~~~nv~~~~~~pq-~~l 356 (473)
..+++..|+.. ....+..+++++..... ++ ++.++.+.. ..+- .+.+.. ..+++.+.++..+ ..+
T Consensus 196 ~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~-----~~~~-~~~~~~~~~~~v~~~g~~~~~~~~ 267 (374)
T 2iw1_A 196 QNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQDKP-----RKFE-ALAEKLGVRSNVHFFSGRNDVSEL 267 (374)
T ss_dssp CEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC-----HHHH-HHHHHHTCGGGEEEESCCSCHHHH
T ss_pred CeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH-----HHHH-HHHHHcCCCCcEEECCCcccHHHH
Confidence 36777778765 33455666777765432 22 333333211 1111 111111 1358999888655 788
Q ss_pred hhCCCcceeee----ccCchhHHHHHhhCCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcC
Q 036520 357 LAHPSIGTSLF----HAGWGSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVS 432 (473)
Q Consensus 357 l~~~~~~~~It----HGG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~ 432 (473)
+..+++ +|. -|..+++.||+++|+|+|+.+. ..+...+++.+.|..++. .-+.++++++|.++++
T Consensus 268 ~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~~~g~~~~~----~~~~~~l~~~i~~l~~- 336 (374)
T 2iw1_A 268 MAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADANCGTVIAE----PFSQEQLNEVLRKALT- 336 (374)
T ss_dssp HHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHHTCEEEECS----SCCHHHHHHHHHHHHH-
T ss_pred HHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccCCceEEeCC----CCCHHHHHHHHHHHHc-
Confidence 999998 665 4667899999999999999765 345556666688888862 2388999999999998
Q ss_pred cchHHHHHHHH
Q 036520 433 EEGEKLRVRAR 443 (473)
Q Consensus 433 ~~~~~~~~~a~ 443 (473)
+++.+++..
T Consensus 337 --~~~~~~~~~ 345 (374)
T 2iw1_A 337 --QSPLRMAWA 345 (374)
T ss_dssp --CHHHHHHHH
T ss_pred --ChHHHHHHH
Confidence 565544433
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.25 E-value=7.2e-11 Score=114.62 Aligned_cols=85 Identities=13% Similarity=0.057 Sum_probs=63.4
Q ss_pred CceEEecccch---HHHhhCCCcceeeeccCchhHHHHHhhCCceeccccccccccceeeeeecceEEEEecCCCCCcCH
Q 036520 343 KGIVSIGWAPQ---LEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTR 419 (473)
Q Consensus 343 ~nv~~~~~~pq---~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~ 419 (473)
+++.+.+++++ .+++..+++ ||+..| +.+.||+++|+|+|+....+.. ..+.+.|.|..++ . +.
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~g~g~~v~-----~-d~ 329 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGIEAGTLKLAG-----T-DE 329 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHHHTTSEEECC-----S-CH
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC----ceeecCCceEEcC-----C-CH
Confidence 58999777765 577888888 888763 5588999999999988543332 2234567787664 2 78
Q ss_pred HHHHHHHHHHhcCcchHHHHHHHH
Q 036520 420 DGIAKALRLATVSEEGEKLRVRAR 443 (473)
Q Consensus 420 ~~l~~~i~~ll~~~~~~~~~~~a~ 443 (473)
++|+++|.++++ |++.++++.
T Consensus 330 ~~la~~i~~ll~---~~~~~~~~~ 350 (375)
T 3beo_A 330 ETIFSLADELLS---DKEAHDKMS 350 (375)
T ss_dssp HHHHHHHHHHHH---CHHHHHHHC
T ss_pred HHHHHHHHHHHh---ChHhHhhhh
Confidence 999999999999 776666544
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.11 E-value=1.6e-09 Score=103.73 Aligned_cols=125 Identities=14% Similarity=0.002 Sum_probs=78.9
Q ss_pred EEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchH---HHhhCCCc
Q 036520 286 VFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQL---EILAHPSI 362 (473)
Q Consensus 286 V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~---~ll~~~~~ 362 (473)
+++..|+.. .......+++++...+.+++++-.+. . ...+ ..+.+..+ +++.+.+|+++. .++..+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~-~----~~~l-~~~~~~~~-~~v~~~g~~~~~~l~~~~~~adv 234 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAW-E----PEYF-DEITRRYG-STVEPIGEVGGERRLDLLASAHA 234 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCC-C----HHHH-HHHHHHHT-TTEEECCCCCHHHHHHHHHHCSE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcc-c----HHHH-HHHHHHhC-CCEEEeccCCHHHHHHHHHhCCE
Confidence 444567764 34556667777776677766653322 1 0111 11222222 699999999874 88889998
Q ss_pred ceee--ec-----------cC-chhHHHHHhhCCceeccccccccccceeeeee--cceEEEEecCCCCCcCHHHHHHHH
Q 036520 363 GTSL--FH-----------AG-WGSVIETLQFGHSLVVLPLIIDQPLNARLLVD--KDLAVQVERKDDGSFTRDGIAKAL 426 (473)
Q Consensus 363 ~~~I--tH-----------GG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~--~G~G~~l~~~~~~~~t~~~l~~~i 426 (473)
+| +. -| -+++.||+++|+|+|+....+ +...+++ -+.|..++ . +.++++++|
T Consensus 235 --~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~----~~e~~~~~~~~~g~~~~-----~-d~~~l~~~i 302 (342)
T 2iuy_A 235 --VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGC----LAEIVPSVGEVVGYGTD-----F-APDEARRTL 302 (342)
T ss_dssp --EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTT----HHHHGGGGEEECCSSSC-----C-CHHHHHHHH
T ss_pred --EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCC----hHHHhcccCCCceEEcC-----C-CHHHHHHHH
Confidence 55 32 33 368999999999999987632 3333433 23343332 4 889999999
Q ss_pred HHHhc
Q 036520 427 RLATV 431 (473)
Q Consensus 427 ~~ll~ 431 (473)
.++++
T Consensus 303 ~~l~~ 307 (342)
T 2iuy_A 303 AGLPA 307 (342)
T ss_dssp HTSCC
T ss_pred HHHHH
Confidence 99887
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.11 E-value=3.2e-09 Score=104.55 Aligned_cols=111 Identities=9% Similarity=-0.007 Sum_probs=75.0
Q ss_pred CCceEEecccc---h---HHHhhCCCcceeeecc----CchhHHHHHhhCCceeccccccccccceeeeeecceEEEEec
Q 036520 342 GKGIVSIGWAP---Q---LEILAHPSIGTSLFHA----GWGSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVER 411 (473)
Q Consensus 342 ~~nv~~~~~~p---q---~~ll~~~~~~~~ItHG----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~ 411 (473)
.+++.+.+|++ + ..++..+++ +|.-. ..+++.||+++|+|+|+.+.. .+...+++.+.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~~----g~~e~i~~~~~g~l~~- 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAVG----GIKFQIVDGETGFLVR- 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESCH----HHHHHCCBTTTEEEES-
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccCC----CChhheecCCCeEEEC-
Confidence 46899988775 2 567888888 66543 457899999999999997753 3444455556776663
Q ss_pred CCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHH-HHhccCCCcHHHHHHHHHHHHH
Q 036520 412 KDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAA-NTFNDKKLHDDYSVRFVEYLKI 468 (473)
Q Consensus 412 ~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~ 468 (473)
+.++++++|.++++ +++.++++.+-+ +.+.+.-+.+..++.+++.+.+
T Consensus 365 ------d~~~la~~i~~ll~---~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 365 ------DANEAVEVVLYLLK---HPEVSKEMGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp ------SHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred ------CHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 67899999999998 666554433332 2232233456666777766654
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.95 E-value=6.4e-10 Score=107.94 Aligned_cols=159 Identities=11% Similarity=0.117 Sum_probs=96.1
Q ss_pred CcEEEEeecCcccCC-HHHHHHHHHHHhcC----CCCEEEEEcCCCCCCCccccCchhhhhh---c-CCCceEEecccch
Q 036520 283 RSVVFVGFGSECKLS-KDQVYEIAYGLELS----GLPFLWALRKPEWATDDVDALPLGFADT---I-RGKGIVSIGWAPQ 353 (473)
Q Consensus 283 ~~~V~vs~Gs~~~~~-~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~p~~~~~~---~-~~~nv~~~~~~pq 353 (473)
++.|+++.|...... .+.+..+++++.+. +..+++..... .-+...+. . ..+|+.+.+.+++
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~---------~~~~l~~~~~~~~~~~~v~l~~~lg~ 273 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR---------TKKRLEDLEGFKELGDKIRFLPAFSF 273 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH---------HHHHHHTSGGGGGTGGGEEECCCCCH
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH---------HHHHHHHHHHHhcCCCCEEEEcCCCH
Confidence 458888888754333 35566777777543 56677755321 00011111 1 1358888666554
Q ss_pred ---HHHhhCCCcceeeeccCchhHHHHHhhCCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHh
Q 036520 354 ---LEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLAT 430 (473)
Q Consensus 354 ---~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll 430 (473)
..+++++++ +||-.|. .+.||.++|+|+|+++-..+-+. ..+.|.++.+. .+.++|.+++.+++
T Consensus 274 ~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~G~~~lv~------~d~~~i~~ai~~ll 340 (385)
T 4hwg_A 274 TDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMDAGTLIMSG------FKAERVLQAVKTIT 340 (385)
T ss_dssp HHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHHTCCEECC------SSHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhcCceEEcC------CCHHHHHHHHHHHH
Confidence 678999998 9999876 46999999999999986543222 24668776553 37899999999999
Q ss_pred cCcchHHHHHHHHHHHHHh-ccCCCcHHHHHHHHHHH
Q 036520 431 VSEEGEKLRVRAREAANTF-NDKKLHDDYSVRFVEYL 466 (473)
Q Consensus 431 ~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~ 466 (473)
+ ++..++++.+..... .+...+++.++.+.+++
T Consensus 341 ~---d~~~~~~m~~~~~~~~g~g~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 341 E---EHDNNKRTQGLVPDYNEAGLVSKKILRIVLSYV 374 (385)
T ss_dssp T---TCBTTBCCSCCCHHHHTCCCHHHHHHHHHHHHH
T ss_pred h---ChHHHHHhhccCCCCCCCChHHHHHHHHHHHHh
Confidence 8 444333222222234 44445555555555544
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.93 E-value=1.2e-07 Score=95.19 Aligned_cols=163 Identities=15% Similarity=0.058 Sum_probs=94.7
Q ss_pred EEEEeecCcccC-CHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcC--CCceE-Eecccch--HHHhh
Q 036520 285 VVFVGFGSECKL-SKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIR--GKGIV-SIGWAPQ--LEILA 358 (473)
Q Consensus 285 ~V~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~--~~nv~-~~~~~pq--~~ll~ 358 (473)
.+++..|+.... ..+.+...+..+.+.+.+++++-.++. ..-+.+.+..+ .+++. +.++... ..++.
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~-------~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~ 364 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDV-------ALEGALLAAASRHHGRVGVAIGYNEPLSHLMQA 364 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCH-------HHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCch-------HHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHh
Confidence 467777887642 223333333333334566555543320 00111111111 25787 6788433 36788
Q ss_pred CCCcceeee----ccCchhHHHHHhhCCceeccccccccccceeeeeec---------ceEEEEecCCCCCcCHHHHHHH
Q 036520 359 HPSIGTSLF----HAGWGSVIETLQFGHSLVVLPLIIDQPLNARLLVDK---------DLAVQVERKDDGSFTRDGIAKA 425 (473)
Q Consensus 359 ~~~~~~~It----HGG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~---------G~G~~l~~~~~~~~t~~~l~~~ 425 (473)
.+++ +|. -|.-.++.||+++|+|+|+.... .....+++. +.|..++.. +.++++++
T Consensus 365 ~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v~~~~~~~~~~~~~~G~l~~~~-----d~~~la~~ 433 (485)
T 1rzu_A 365 GCDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTVIDANHAALASKAATGVQFSPV-----TLDGLKQA 433 (485)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCBCCHHHHHTTCCCBEEESSC-----SHHHHHHH
T ss_pred cCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCCC----ChhheecccccccccccCCcceEeCCC-----CHHHHHHH
Confidence 8998 663 23346899999999999997653 233334443 577777654 78999999
Q ss_pred HHHHh---cCcchHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHhc
Q 036520 426 LRLAT---VSEEGEKLRVRAREAANTFNDKKLHDDYSVRFVEYLKINV 470 (473)
Q Consensus 426 i~~ll---~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (473)
|.+++ + +++.++++.+-+. ++.-+.+..++.+++......
T Consensus 434 i~~ll~~~~---~~~~~~~~~~~~~--~~~fs~~~~~~~~~~~y~~~~ 476 (485)
T 1rzu_A 434 IRRTVRYYH---DPKLWTQMQKLGM--KSDVSWEKSAGLYAALYSQLI 476 (485)
T ss_dssp HHHHHHHHT---CHHHHHHHHHHHH--TCCCBHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhC---CHHHHHHHHHHHH--HHhCChHHHHHHHHHHHHHhh
Confidence 99999 6 6666555444332 234445666677776665443
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.90 E-value=1.4e-07 Score=99.38 Aligned_cols=168 Identities=11% Similarity=-0.031 Sum_probs=91.5
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHhcC-----CCCEEEEEcCCCCCCCccc--cCchhhhh----hcCCCceEEecc--
Q 036520 284 SVVFVGFGSECKLSKDQVYEIAYGLELS-----GLPFLWALRKPEWATDDVD--ALPLGFAD----TIRGKGIVSIGW-- 350 (473)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~--~~p~~~~~----~~~~~nv~~~~~-- 350 (473)
..+++..|... +.+.+..+++++... +.+++++-++......+.. ..-+.+.. ..-.++|.+.++
T Consensus 572 ~~vIl~vGRl~--~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~ 649 (816)
T 3s28_A 572 KPILFTMARLD--RVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQM 649 (816)
T ss_dssp SCEEEEECCCC--TTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCC
T ss_pred CeEEEEEccCc--ccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCcc
Confidence 36677778875 344555566666543 3444444333210000000 00011111 112468888874
Q ss_pred --cchHHHhh----CCCcceeeec----cCchhHHHHHhhCCceeccccccccccceeeeeecceEEEEecCCCCCcCHH
Q 036520 351 --APQLEILA----HPSIGTSLFH----AGWGSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRD 420 (473)
Q Consensus 351 --~pq~~ll~----~~~~~~~ItH----GG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~ 420 (473)
+++.++.. .+++ ||.- |-..++.||+++|+|+|+.. -......+++-+.|..++.. +.+
T Consensus 650 ~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV~dg~~Gllv~p~-----D~e 718 (816)
T 3s28_A 650 DRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVHGKSGFHIDPY-----HGD 718 (816)
T ss_dssp CHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHCCBTTTBEEECTT-----SHH
T ss_pred ccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHHccCCcEEEeCCC-----CHH
Confidence 44455544 4566 6632 33469999999999999964 33444455555678888764 788
Q ss_pred HHHHHHHHHh----cCcchHHHHHHHHHHHHH-hccCCCcHHHHHHHHHHHH
Q 036520 421 GIAKALRLAT----VSEEGEKLRVRAREAANT-FNDKKLHDDYSVRFVEYLK 467 (473)
Q Consensus 421 ~l~~~i~~ll----~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~ 467 (473)
+++++|.+++ . +++.+++..+-+.. +.+.-+-+..++.+++..+
T Consensus 719 ~LA~aI~~lL~~Ll~---d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 719 QAADTLADFFTKCKE---DPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp HHHHHHHHHHHHHHH---CTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999997776 6 45544443333322 2233344555565555443
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.84 E-value=5.8e-07 Score=90.20 Aligned_cols=160 Identities=14% Similarity=0.014 Sum_probs=93.4
Q ss_pred EEEEeecCcccCCHHHHHHHHHHH---hcCCCCEEEEEcCCCCCCCccccCchhhhhhcC--CCceE-Eecccch--HHH
Q 036520 285 VVFVGFGSECKLSKDQVYEIAYGL---ELSGLPFLWALRKPEWATDDVDALPLGFADTIR--GKGIV-SIGWAPQ--LEI 356 (473)
Q Consensus 285 ~V~vs~Gs~~~~~~~~~~~~~~al---~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~--~~nv~-~~~~~pq--~~l 356 (473)
.+++..|.... ...+..+++++ .+.+.+++++-.+.. ..-+.+.+..+ .+++. +.++... ..+
T Consensus 293 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~-------~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~ 363 (485)
T 2qzs_A 293 PLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALLGAGDP-------VLQEGFLAAAAEYPGQVGVQIGYHEAFSHRI 363 (485)
T ss_dssp CEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEEEEECH-------HHHHHHHHHHHHSTTTEEEEESCCHHHHHHH
T ss_pred eEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEEeCCch-------HHHHHHHHHHHhCCCcEEEeCCCCHHHHHHH
Confidence 56666677653 33334444444 334566655543320 01111211111 25786 7788433 377
Q ss_pred hhCCCcceeeec----cCchhHHHHHhhCCceeccccccccccceeeeeec---------ceEEEEecCCCCCcCHHHHH
Q 036520 357 LAHPSIGTSLFH----AGWGSVIETLQFGHSLVVLPLIIDQPLNARLLVDK---------DLAVQVERKDDGSFTRDGIA 423 (473)
Q Consensus 357 l~~~~~~~~ItH----GG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~---------G~G~~l~~~~~~~~t~~~l~ 423 (473)
++.+++ +|.- |.-.++.||+++|+|+|+.... .....+++. +.|..++.. +.++++
T Consensus 364 ~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e~v~~~~~~~~~~~~~~G~l~~~~-----d~~~la 432 (485)
T 2qzs_A 364 MGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLADTVSDCSLENLADGVASGFVFEDS-----NAWSLL 432 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCBCCHHHHHTTCCCBEEECSS-----SHHHHH
T ss_pred HHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCCC----CccceeccCccccccccccceEEECCC-----CHHHHH
Confidence 889998 6532 3346899999999999998653 233334443 577777654 789999
Q ss_pred HHHHHHh---cCcchHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHh
Q 036520 424 KALRLAT---VSEEGEKLRVRAREAANTFNDKKLHDDYSVRFVEYLKIN 469 (473)
Q Consensus 424 ~~i~~ll---~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (473)
++|.+++ + +++.++++.+-+.. +.-+.+..++.+++.....
T Consensus 433 ~~i~~ll~~~~---~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~ 476 (485)
T 2qzs_A 433 RAIRRAFVLWS---RPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRL 476 (485)
T ss_dssp HHHHHHHHHHT---SHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC---CHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHh
Confidence 9999999 6 56665554433322 3444566667776665543
No 43
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.78 E-value=2.5e-06 Score=83.61 Aligned_cols=170 Identities=9% Similarity=-0.004 Sum_probs=96.6
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHhc-----CCCCEEEEEcCCCCCCCccccCchhhhh---hcC-CCc-------eEE
Q 036520 284 SVVFVGFGSECKLSKDQVYEIAYGLEL-----SGLPFLWALRKPEWATDDVDALPLGFAD---TIR-GKG-------IVS 347 (473)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~p~~~~~---~~~-~~n-------v~~ 347 (473)
..+++..|.... ...+..+++++.. .+.+++++-.+.... ...+-+.+.+ ..+ ..+ +.+
T Consensus 184 ~~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~---~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~ 258 (413)
T 3oy2_A 184 DVLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHES---KFDLHSIALRELVASGVDNVFTHLNKIMIN 258 (413)
T ss_dssp SEEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTC---SCCHHHHHHHHHHHHTCSCHHHHHTTEEEE
T ss_pred ceEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccc---hhhHHHHHHHHHHHcCcccccccccceeec
Confidence 377778888643 3344444444433 456777665543221 1111111211 111 122 677
Q ss_pred ecccch---HHHhhCCCcceeee----ccCchhHHHHHhhCCceecccccc--ccccceee--eee-------cceEE--
Q 036520 348 IGWAPQ---LEILAHPSIGTSLF----HAGWGSVIETLQFGHSLVVLPLII--DQPLNARL--LVD-------KDLAV-- 407 (473)
Q Consensus 348 ~~~~pq---~~ll~~~~~~~~It----HGG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~--v~~-------~G~G~-- 407 (473)
.+|+|+ ..++..+++ +|. -|...++.||+++|+|+|+....+ |...+..- +.. .+.|.
T Consensus 259 ~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~g 336 (413)
T 3oy2_A 259 RTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGG 336 (413)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCC
T ss_pred cCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcce
Confidence 799985 567888888 553 233468999999999999976532 22221110 111 11144
Q ss_pred EEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHH-hccCCCcHHHHHHHHHHHHHh
Q 036520 408 QVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANT-FNDKKLHDDYSVRFVEYLKIN 469 (473)
Q Consensus 408 ~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 469 (473)
.+... +.++++++| ++++ +++.+++..+-+.. +.+.-+.+..++.+.+.++..
T Consensus 337 l~~~~-----d~~~la~~i-~l~~---~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~ 390 (413)
T 3oy2_A 337 IEGII-----DVDDLVEAF-TFFK---DEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSL 390 (413)
T ss_dssp EEEEC-----CHHHHHHHH-HHTT---SHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHH
T ss_pred eeCCC-----CHHHHHHHH-HHhc---CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 45443 899999999 9999 67665555444443 334445667777777766553
No 44
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.69 E-value=3.3e-06 Score=82.66 Aligned_cols=72 Identities=13% Similarity=0.110 Sum_probs=55.8
Q ss_pred CceEEecccch---HHHhhCCCcceeee---ccCc-hhHHHHH-------hhCCceeccccccccccceeeeeecceEEE
Q 036520 343 KGIVSIGWAPQ---LEILAHPSIGTSLF---HAGW-GSVIETL-------QFGHSLVVLPLIIDQPLNARLLVDKDLAVQ 408 (473)
Q Consensus 343 ~nv~~~~~~pq---~~ll~~~~~~~~It---HGG~-~s~~eal-------~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~ 408 (473)
+||.+.+++|+ ..+++.+++ +|. +-|. +++.||+ ++|+|+|+... +.+...|..
T Consensus 265 ~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~~~G~l 332 (406)
T 2hy7_A 265 DNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGPYKSRF 332 (406)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCSCSSEE
T ss_pred CCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccCcceEE
Confidence 48999999986 467888998 553 3344 6789999 99999999866 444445766
Q ss_pred -EecCCCCCcCHHHHHHHHHHHhc
Q 036520 409 -VERKDDGSFTRDGIAKALRLATV 431 (473)
Q Consensus 409 -l~~~~~~~~t~~~l~~~i~~ll~ 431 (473)
++.. +.++++++|.++++
T Consensus 333 ~v~~~-----d~~~la~ai~~ll~ 351 (406)
T 2hy7_A 333 GYTPG-----NADSVIAAITQALE 351 (406)
T ss_dssp EECTT-----CHHHHHHHHHHHHH
T ss_pred EeCCC-----CHHHHHHHHHHHHh
Confidence 6554 78999999999998
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.54 E-value=3.7e-07 Score=78.28 Aligned_cols=141 Identities=8% Similarity=0.013 Sum_probs=91.5
Q ss_pred EEEEeecCcccCCHHHHHHHHHHHhcC-CCCEEEEEcCCCCCCCccccCchhhh--hhcCCCceEEecccch---HHHhh
Q 036520 285 VVFVGFGSECKLSKDQVYEIAYGLELS-GLPFLWALRKPEWATDDVDALPLGFA--DTIRGKGIVSIGWAPQ---LEILA 358 (473)
Q Consensus 285 ~V~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~p~~~~--~~~~~~nv~~~~~~pq---~~ll~ 358 (473)
.+++..|+.. ....+..+++++... +.+++++-.+... ..+-.... +..-.+|+.+.+|+++ ..++.
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~~~-----~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~ 96 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFSKG-----DHAERYARKIMKIAPDNVKFLGSVSEEELIDLYS 96 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCTT-----STHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCccH-----HHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHH
Confidence 4455667765 345566677777765 5566665433211 11111111 1112358999999997 77888
Q ss_pred CCCcceeee---ccCc-hhHHHHHhhCCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcc
Q 036520 359 HPSIGTSLF---HAGW-GSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEE 434 (473)
Q Consensus 359 ~~~~~~~It---HGG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~ 434 (473)
.+++ +|. +.|+ .++.||+++|+|+|+... ..+...+++.+.|..+ .. +.++++++|.++++
T Consensus 97 ~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~~~g~~~-~~-----d~~~l~~~i~~l~~--- 161 (177)
T 2f9f_A 97 RCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINEKTGYLV-NA-----DVNEIIDAMKKVSK--- 161 (177)
T ss_dssp HCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBTTTEEEE-CS-----CHHHHHHHHHHHHH---
T ss_pred hCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCCCccEEe-CC-----CHHHHHHHHHHHHh---
Confidence 9998 665 3344 599999999999999764 3444455556678777 54 78999999999998
Q ss_pred hHHH-HHHHHHHHH
Q 036520 435 GEKL-RVRAREAAN 447 (473)
Q Consensus 435 ~~~~-~~~a~~~~~ 447 (473)
+++. ++++++.++
T Consensus 162 ~~~~~~~~~~~~a~ 175 (177)
T 2f9f_A 162 NPDKFKKDCFRRAK 175 (177)
T ss_dssp CTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 4444 666655544
No 46
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.46 E-value=3.2e-05 Score=79.07 Aligned_cols=112 Identities=12% Similarity=0.045 Sum_probs=71.0
Q ss_pred CceEEecccch---HHHhhCCCcceee--e-ccCchhHHHHHhhCCceeccccc---cccccceeeeeecceEEEEecCC
Q 036520 343 KGIVSIGWAPQ---LEILAHPSIGTSL--F-HAGWGSVIETLQFGHSLVVLPLI---IDQPLNARLLVDKDLAVQVERKD 413 (473)
Q Consensus 343 ~nv~~~~~~pq---~~ll~~~~~~~~I--t-HGG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~v~~~G~G~~l~~~~ 413 (473)
++|.+.+++|+ ..++..+++ || + .|+.+++.||+++|+|+|++|-. .|-. +..+...|+.-.+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~--~~~l~~~g~~e~v~--- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVA--GSLNHHLGLDEMNV--- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHH--HHHHHHHTCGGGBC---
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHH--HHHHHHCCChhhhc---
Confidence 58999999985 566888888 65 2 26668999999999999997632 1211 11222224332221
Q ss_pred CCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHH-h--ccCCCcHHHHHHHHHHHH
Q 036520 414 DGSFTRDGIAKALRLATVSEEGEKLRVRAREAANT-F--NDKKLHDDYSVRFVEYLK 467 (473)
Q Consensus 414 ~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~-~--~~~~~~~~~~~~~~~~~~ 467 (473)
-+.+++++++.++++ +++.+++..+-+.. . ...-+.+..++.+.+...
T Consensus 507 ---~~~~~la~~i~~l~~---~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~ 557 (568)
T 2vsy_A 507 ---ADDAAFVAKAVALAS---DPAALTALHARVDVLRRASGVFHMDGFADDFGALLQ 557 (568)
T ss_dssp ---SSHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHhc---CHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHH
Confidence 178999999999999 67666655443332 2 233444555565555443
No 47
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=98.32 E-value=2.1e-05 Score=77.04 Aligned_cols=84 Identities=19% Similarity=0.111 Sum_probs=58.6
Q ss_pred CceEEecccch---HHHhhCCCcceeee--c-cCc-hhHHHHHhhCCceeccccccccccceeeeeecceEEEEecCCCC
Q 036520 343 KGIVSIGWAPQ---LEILAHPSIGTSLF--H-AGW-GSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDG 415 (473)
Q Consensus 343 ~nv~~~~~~pq---~~ll~~~~~~~~It--H-GG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~ 415 (473)
.++.+.+++|+ .++++.+++ ||. . =|. .++.||+++|+|+|+ -..+ ....+++-..|+.++..
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~~~G~lv~~~--- 364 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWHSNIVSLEQL--- 364 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTBTTEEEESSC---
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcCCCEEEeCCC---
Confidence 48899999987 567888998 664 2 133 578999999999998 3222 22334444568777654
Q ss_pred CcCHHHHHHHHHHHhcCcchHHHHHH
Q 036520 416 SFTRDGIAKALRLATVSEEGEKLRVR 441 (473)
Q Consensus 416 ~~t~~~l~~~i~~ll~~~~~~~~~~~ 441 (473)
+.++++++|.++++ |++.+++
T Consensus 365 --d~~~la~ai~~ll~---~~~~~~~ 385 (413)
T 2x0d_A 365 --NPENIAETLVELCM---SFNNRDV 385 (413)
T ss_dssp --SHHHHHHHHHHHHH---HTC----
T ss_pred --CHHHHHHHHHHHHc---CHHHHHH
Confidence 88999999999999 7766665
No 48
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.18 E-value=5.9e-05 Score=72.78 Aligned_cols=96 Identities=14% Similarity=0.152 Sum_probs=61.9
Q ss_pred ceEEecccch-HHHhhCCCcceeeec-----cCchhHHHHHhhCCceeccccccccccceeeeeecceEEEEecCCCCCc
Q 036520 344 GIVSIGWAPQ-LEILAHPSIGTSLFH-----AGWGSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSF 417 (473)
Q Consensus 344 nv~~~~~~pq-~~ll~~~~~~~~ItH-----GG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~ 417 (473)
++.+.++..+ ..+++.+++ ++.- +|..++.||+++|+|+|+-|..++.......+.+.|.++.. .
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~--~----- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEV--K----- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEEC--C-----
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEe--C-----
Confidence 5666665544 778888887 5541 23478999999999999766555444444333345766544 2
Q ss_pred CHHHHHHHHHHHhcCcchHHHHHHHHHHHHH
Q 036520 418 TRDGIAKALRLATVSEEGEKLRVRAREAANT 448 (473)
Q Consensus 418 t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~ 448 (473)
+.++|+++|.++++++.-..+.+++++..+.
T Consensus 332 d~~~La~ai~~ll~d~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 332 NETELVTKLTELLSVKKEIKVEEKSREIKGC 362 (374)
T ss_dssp SHHHHHHHHHHHHHSCCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 6789999999999831112455555554443
No 49
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.82 E-value=0.00013 Score=61.29 Aligned_cols=134 Identities=12% Similarity=0.081 Sum_probs=76.6
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHhcCC--CCEEEEEcCCCCCCCccccCchhhhhhcC--CCceEEecccch---HHH
Q 036520 284 SVVFVGFGSECKLSKDQVYEIAYGLELSG--LPFLWALRKPEWATDDVDALPLGFADTIR--GKGIVSIGWAPQ---LEI 356 (473)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~i~~~~~~~~~~~~~~~~p~~~~~~~~--~~nv~~~~~~pq---~~l 356 (473)
+.+++..|+.. ....+..+++++.... .++.+.+-+... ..+.+.+..+ .-++.+ +|+|+ ..+
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-------~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~ 71 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGKGP-------DEKKIKLLAQKLGVKAEF-GFVNSNELLEI 71 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECCST-------THHHHHHHHHHHTCEEEC-CCCCHHHHHHH
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeCCc-------cHHHHHHHHHHcCCeEEE-eecCHHHHHHH
Confidence 36777778775 3455666666776542 233333322211 0112222111 116778 99986 567
Q ss_pred hhCCCcceeee----ccCchhHHHHHhhCC-ceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhc
Q 036520 357 LAHPSIGTSLF----HAGWGSVIETLQFGH-SLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATV 431 (473)
Q Consensus 357 l~~~~~~~~It----HGG~~s~~eal~~Gv-P~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~ 431 (473)
+..+++ +|. -|...++.||+++|+ |+|+....+ .....+.+.|. .+.. -+.++++++|.++++
T Consensus 72 ~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~~~--~~~~-----~~~~~l~~~i~~l~~ 139 (166)
T 3qhp_A 72 LKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDERS--LFEP-----NNAKDLSAKIDWWLE 139 (166)
T ss_dssp HTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSGGG--EECT-----TCHHHHHHHHHHHHH
T ss_pred HHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCCce--EEcC-----CCHHHHHHHHHHHHh
Confidence 888888 664 233469999999996 999933211 11112222233 2333 388999999999998
Q ss_pred CcchHHHHHHH
Q 036520 432 SEEGEKLRVRA 442 (473)
Q Consensus 432 ~~~~~~~~~~a 442 (473)
+++.+++.
T Consensus 140 ---~~~~~~~~ 147 (166)
T 3qhp_A 140 ---NKLERERM 147 (166)
T ss_dssp ---CHHHHHHH
T ss_pred ---CHHHHHHH
Confidence 56544433
No 50
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.65 E-value=0.0051 Score=58.45 Aligned_cols=104 Identities=12% Similarity=0.079 Sum_probs=72.9
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCccccCCCCCCCcccCCCeE-EEEecCCccccccccCCCC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKS--GVKVSFISTPKNIQRLPKPAPESEVAALIN-FVEFPLPASAALDDKLLLP 80 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~-~~~i~~~~~~~~~~~~~l~ 80 (473)
.+|||++-..+.|++.-+.++.++|+++ +.+|++++.+.+.+.++.. +.++ ++.++ ..
T Consensus 8 ~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~-------p~vd~vi~~~----------~~-- 68 (349)
T 3tov_A 8 YKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN-------PNIDELIVVD----------KK-- 68 (349)
T ss_dssp TCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC-------TTCSEEEEEC----------CS--
T ss_pred CCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC-------CCccEEEEeC----------cc--
Confidence 3689999999999999999999999997 8999999999988877653 4553 44443 10
Q ss_pred CCCccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCC-cEEEEcCCcchHHHHHHHcCCCeEE
Q 036520 81 EGAEATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSV-DWIIVDVMSHWAGKIAQEYHVPLLL 142 (473)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~p-D~vI~D~~~~~~~~~A~~lgiP~v~ 142 (473)
.. ...+.. ...+...+++.++ |++|.=....-...++...|+|..+
T Consensus 69 ---------~~--~~~~~~-----~~~l~~~Lr~~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 ---------GR--HNSISG-----LNEVAREINAKGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp ---------SH--HHHHHH-----HHHHHHHHHHHCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ---------cc--cccHHH-----HHHHHHHHhhCCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 00 001111 1123455677799 9999655555566788889999653
No 51
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.42 E-value=0.0016 Score=56.32 Aligned_cols=77 Identities=10% Similarity=0.072 Sum_probs=57.8
Q ss_pred ceEE-ecccch---HHHhhCCCcceeeecc---C-chhHHHHHhhCCceeccccccccccceeeeeecceEEEEecCCCC
Q 036520 344 GIVS-IGWAPQ---LEILAHPSIGTSLFHA---G-WGSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDG 415 (473)
Q Consensus 344 nv~~-~~~~pq---~~ll~~~~~~~~ItHG---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~ 415 (473)
++.+ .+++++ ..++..+++ +|.-. | ..++.||+++|+|+|+.... .+...+ +.+.|..++..
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~~~~g~~~~~~--- 165 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TNETGILVKAG--- 165 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-CTTTCEEECTT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-CCCceEEecCC---
Confidence 8999 999985 577888888 66422 3 46899999999999987653 233334 44677777654
Q ss_pred CcCHHHHHHHHHHHhc-C
Q 036520 416 SFTRDGIAKALRLATV-S 432 (473)
Q Consensus 416 ~~t~~~l~~~i~~ll~-~ 432 (473)
+.++++++|.++++ +
T Consensus 166 --~~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 166 --DPGELANAILKALELS 181 (200)
T ss_dssp --CHHHHHHHHHHHHHCC
T ss_pred --CHHHHHHHHHHHHhcC
Confidence 78999999999987 5
No 52
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.42 E-value=0.003 Score=59.97 Aligned_cols=103 Identities=13% Similarity=0.063 Sum_probs=68.5
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCccccCCCCCCCcccCCCe-EEEEecCCccccccccCCCCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKS--GVKVSFISTPKNIQRLPKPAPESEVAALI-NFVEFPLPASAALDDKLLLPE 81 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i-~~~~i~~~~~~~~~~~~~l~~ 81 (473)
|||+++.....|++.-+.++.++|+++ +.+|++++.+.+.+.+... +.+ +++.++. .
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~-------p~i~~v~~~~~---------~---- 60 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM-------PEVNEAIPMPL---------G---- 60 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC-------TTEEEEEEC----------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC-------CccCEEEEecC---------C----
Confidence 689999998889999999999999987 9999999998777665443 344 3443320 0
Q ss_pred CCccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCcchHHHHHHHcCCCeEE
Q 036520 82 GAEATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMSHWAGKIAQEYHVPLLL 142 (473)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~ 142 (473)
. .... +. ....+.+.+++.+||++|.=........++...|+|...
T Consensus 61 ---~---~~~~----~~-----~~~~l~~~l~~~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 61 ---H---GALE----IG-----ERRKLGHSLREKRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp ----------C----HH-----HHHHHHHHTTTTTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ---c---cccc----hH-----HHHHHHHHHHhcCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 0 0000 00 112345566778999999322334566778888999743
No 53
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.24 E-value=0.0016 Score=68.20 Aligned_cols=102 Identities=20% Similarity=0.248 Sum_probs=74.4
Q ss_pred CCcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhh-hcCCCceEEecccchHHHh---
Q 036520 282 PRSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFAD-TIRGKGIVSIGWAPQLEIL--- 357 (473)
Q Consensus 282 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~-~~~~~nv~~~~~~pq~~ll--- 357 (473)
++.+||.||.+..+.+++.+..-.+-|++.+.-.+|.+...... ...+-..+.+ .+..+.+++.+.+|..+-|
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~---~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~ 597 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG---EPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRG 597 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG---HHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHG
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH---HHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHh
Confidence 35599999999999999999988888888888888888754221 1111111211 1234578888888875444
Q ss_pred hCCCcceeee---ccCchhHHHHHhhCCceeccc
Q 036520 358 AHPSIGTSLF---HAGWGSVIETLQFGHSLVVLP 388 (473)
Q Consensus 358 ~~~~~~~~It---HGG~~s~~eal~~GvP~l~~P 388 (473)
..+++ ++- .+|.+|+.|||.+|||+|.++
T Consensus 598 ~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 598 QLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp GGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCC
T ss_pred CCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEcc
Confidence 45555 765 889999999999999999998
No 54
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.15 E-value=0.0018 Score=65.33 Aligned_cols=148 Identities=11% Similarity=0.041 Sum_probs=91.6
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEE--cCCCCCCCccccCchhhhhhcCCCceEEecccchHH---Hhh
Q 036520 284 SVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWAL--RKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLE---ILA 358 (473)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~---ll~ 358 (473)
.++|.||++..+..++.+....+-+.+.+..++|.. +..... ...+-..+....-.+.+++.+.+|..+ .+.
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~---~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~ 517 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGI---THPYVERFIKSYLGDSATAHPHSPYHQYLRILH 517 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGG---GHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchh---hHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHh
Confidence 599999999988888888888887777777777643 322111 011111111111124788889998755 447
Q ss_pred CCCcceeee---ccCchhHHHHHhhCCceecccccc-ccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcc
Q 036520 359 HPSIGTSLF---HAGWGSVIETLQFGHSLVVLPLII-DQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEE 434 (473)
Q Consensus 359 ~~~~~~~It---HGG~~s~~eal~~GvP~l~~P~~~-DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~ 434 (473)
.+++ |+. .+|.+|++||+.+|||+|+.+-.. -...-+..+...|+.-.+-. -+.++..+...++.+
T Consensus 518 ~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA-----~d~eeYv~~Av~La~--- 587 (631)
T 3q3e_A 518 NCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA-----NTVDEYVERAVRLAE--- 587 (631)
T ss_dssp TCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE-----SSHHHHHHHHHHHHH---
T ss_pred cCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec-----CCHHHHHHHHHHHhC---
Confidence 7777 553 378899999999999999987421 11111222334455431111 267777777778888
Q ss_pred hHHHHHHHHH
Q 036520 435 GEKLRVRARE 444 (473)
Q Consensus 435 ~~~~~~~a~~ 444 (473)
|++.+++.++
T Consensus 588 D~~~l~~LR~ 597 (631)
T 3q3e_A 588 NHQERLELRR 597 (631)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6776665544
No 55
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=97.09 E-value=0.011 Score=55.56 Aligned_cols=45 Identities=13% Similarity=0.219 Sum_probs=40.2
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCccccCCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKS--GVKVSFISTPKNIQRLPK 49 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~~~~~~~~ 49 (473)
|||+++-..+-|++.-+.++.++|+++ +.+|++++.+.+.+.+..
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 47 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSW 47 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHT
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhc
Confidence 689999999999999999999999987 899999999887766544
No 56
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.98 E-value=0.00083 Score=63.47 Aligned_cols=108 Identities=13% Similarity=0.115 Sum_probs=78.8
Q ss_pred ceEEecccchHHH---hhCCCcceeeeccCc---------hhHHHHHhhCCceeccccccccccceeeeeecceEEEEec
Q 036520 344 GIVSIGWAPQLEI---LAHPSIGTSLFHAGW---------GSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVER 411 (473)
Q Consensus 344 nv~~~~~~pq~~l---l~~~~~~~~ItHGG~---------~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~ 411 (473)
|+.+.+|+|..++ |+.++.+++.+-+.+ +-+.|++++|+|+|+.+ ...++..+++.|+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~~~G~~~~- 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENNGLGWIVK- 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHHTCEEEES-
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhCCeEEEeC-
Confidence 8999999999665 455666555533433 34789999999999754 557788888899999874
Q ss_pred CCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHH
Q 036520 412 KDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFV 463 (473)
Q Consensus 412 ~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 463 (473)
+.+++.++|.++.. ++-.++++|+++.++.++..-.+.+++...+
T Consensus 290 ------~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~~~~f~k~~l~~~~ 334 (339)
T 3rhz_A 290 ------DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILRKGFFTRRLLTESV 334 (339)
T ss_dssp ------SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHHTTHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 35788888888754 2245788999999888876655565554433
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=95.08 E-value=0.18 Score=50.69 Aligned_cols=171 Identities=8% Similarity=-0.026 Sum_probs=88.7
Q ss_pred CcEEEEeecCcccCCHHHHHHHHHHH---hcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccch---HHH
Q 036520 283 RSVVFVGFGSECKLSKDQVYEIAYGL---ELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQ---LEI 356 (473)
Q Consensus 283 ~~~V~vs~Gs~~~~~~~~~~~~~~al---~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq---~~l 356 (473)
+.++++..|.... .+.+..+++++ .+.+.+++++..++... ...-.... .....++.+....+. ..+
T Consensus 326 ~~p~i~~vgRl~~--~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~----~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~ 398 (536)
T 3vue_A 326 KIPLIAFIGRLEE--QKGPDVMAAAIPELMQEDVQIVLLGTGKKKF----EKLLKSME-EKYPGKVRAVVKFNAPLAHLI 398 (536)
T ss_dssp TSCEEEEECCBSG--GGCHHHHHHHHHHHTTSSCEEEEECCBCHHH----HHHHHHHH-HHSTTTEEEECSCCHHHHHHH
T ss_pred CCcEEEEEeeccc--cCChHHHHHHHHHhHhhCCeEEEEeccCchH----HHHHHHHH-hhcCCceEEEEeccHHHHHHH
Confidence 3356666787753 34444455554 44566666654433110 00000011 112347777777765 456
Q ss_pred hhCCCcceeeec---cCc-hhHHHHHhhCCceeccccccccccceeeeeecceEEEEecCC-CC----CcCHHHHHHHHH
Q 036520 357 LAHPSIGTSLFH---AGW-GSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKD-DG----SFTRDGIAKALR 427 (473)
Q Consensus 357 l~~~~~~~~ItH---GG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~-~~----~~t~~~l~~~i~ 427 (473)
++.+++ ||.= =|. .+++||+++|+|+|+....+ ....+++-.-|......+ ++ ..+.+.|+++|+
T Consensus 399 ~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG----~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ 472 (536)
T 3vue_A 399 MAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTGG----LVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLK 472 (536)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCTH----HHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHH
T ss_pred HHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCCC----chheeeCCCCccccccCCCceeEECCCCHHHHHHHHH
Confidence 788888 6642 233 58999999999999876532 122222222333222110 00 236788999999
Q ss_pred HHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHh
Q 036520 428 LATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFVEYLKIN 469 (473)
Q Consensus 428 ~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (473)
++++--+++.+++..++ .++..-+=+..+.+.++...++
T Consensus 473 ral~~~~~~~~~~~~~~---am~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 473 RAIKVVGTPAYEEMVRN---CMNQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp HHHHHTTSHHHHHHHHH---HHHSCCSSHHHHHHHHHHHHTT
T ss_pred HHHHhcCcHHHHHHHHH---HHHhcCCHHHHHHHHHHHHHHh
Confidence 88751114555443322 2332334466666666655543
No 58
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=93.25 E-value=0.59 Score=41.32 Aligned_cols=113 Identities=11% Similarity=0.176 Sum_probs=65.8
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCCCc
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEGAE 84 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~~~ 84 (473)
||||+.--=+. |---+..|+++|.+.| +|+++.+....+-.-... .....+++..+. .+.. .
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si---t~~~pl~~~~~~----------~~~~---~ 63 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL---TFTEPLKMRKID----------TDFY---T 63 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC---CCSSCEEEEEEE----------TTEE---E
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccce---ecCCCeEEEEec----------CCCe---E
Confidence 78888766444 3445788899998888 999999877655443321 223456666554 2110 1
Q ss_pred cCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcC----------Cc---chHHHHHHHcCCCeEEEec
Q 036520 85 ATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDV----------MS---HWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~----------~~---~~~~~~A~~lgiP~v~~~~ 145 (473)
.....+.+.. .-.+..++...+||+||+-. +. ..|+.-|..+|||.|.++.
T Consensus 64 ~v~GTPaDCV----------~lal~~l~~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 64 VIDGTPADCV----------HLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp ETTCCHHHHH----------HHHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred EECCCHHHHH----------HHHHHHhcCCCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 1122222211 11233444446899999752 22 2344456789999999865
No 59
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=92.12 E-value=0.3 Score=43.37 Aligned_cols=43 Identities=16% Similarity=0.090 Sum_probs=31.5
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRL 47 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~ 47 (473)
++||||+.--=+. |---+..|+++|.+ +|+|+++.+....+-.
T Consensus 10 ~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~ 52 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGA 52 (261)
T ss_dssp -CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTC
T ss_pred CCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCc
Confidence 4589988776554 44457888999976 8999999987765544
No 60
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=90.55 E-value=1.9 Score=38.22 Aligned_cols=112 Identities=11% Similarity=0.187 Sum_probs=62.6
Q ss_pred EEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCCCcc
Q 036520 6 HVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEGAEA 85 (473)
Q Consensus 6 ~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~~~~ 85 (473)
|||+.--=+. +---+..|+++|.+.| +|+++.+....+-.-... .....+++..+.. .. ...
T Consensus 3 ~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~si---T~~~pl~~~~~~~----------~~---~~~ 64 (251)
T 2wqk_A 3 TFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL---TFTEPLKMRKIDT----------DF---YTV 64 (251)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC---CCSSCEEEEEEET----------TE---EEE
T ss_pred EEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCc---CCCCCceeEEeec----------cc---eee
Confidence 4666544332 2223778899998888 599888776555433221 2234556655531 10 001
Q ss_pred CCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEc----------CCc---chHHHHHHHcCCCeEEEec
Q 036520 86 TVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVD----------VMS---HWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D----------~~~---~~~~~~A~~lgiP~v~~~~ 145 (473)
....+.+.. .-.+..++.+.+||+||+- .+. .+|+.=|..+|||.|.++-
T Consensus 65 v~GTPaDCV----------~lal~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 65 IDGTPADCV----------HLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp TTCCHHHHH----------HHHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCChHHHH----------hhhhhhhcCCCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 112222211 1134456667899999983 222 3444556799999999864
No 61
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=88.86 E-value=2.1 Score=37.74 Aligned_cols=115 Identities=11% Similarity=0.143 Sum_probs=61.5
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCCCc
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEGAE 84 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~~~ 84 (473)
||||+.--=+. |---+..|+++|.+.| +|+++.+....+-+-... .....+++..+. .+-.....
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si---Tl~~pl~~~~~~----------~~~~~~~~ 65 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSI---TIHVPLWMKKVF----------ISERVVAY 65 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC---CCSSCCCEEECC----------CSSSEEEE
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc---cCCCCeEEEEec----------cCCCCceE
Confidence 56766554333 2333788899998887 899999877655443321 222345555543 11000001
Q ss_pred cCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcC----------Cc---chHHHHHHHcCCCeEEEec
Q 036520 85 ATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDV----------MS---HWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~----------~~---~~~~~~A~~lgiP~v~~~~ 145 (473)
.....|.+... =.+..++ ..+||+||+-. +. ..|+.=|..+|||.|.++.
T Consensus 66 ~v~GTPaDCV~----------lal~~l~-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 66 STTGTPADCVK----------LAYNVVM-DKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp EESSCHHHHHH----------HHHHTTS-TTCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred EECCcHHHHHH----------HHHHhhc-cCCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 11122222111 1222333 35899999752 21 2344456789999999865
No 62
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=88.21 E-value=0.55 Score=40.38 Aligned_cols=46 Identities=15% Similarity=0.105 Sum_probs=39.9
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRL 47 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~ 47 (473)
|.+++||++...|+.|-+. ...+.+.|.++|++|.++.++....++
T Consensus 1 m~~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi 46 (209)
T 3zqu_A 1 MSGPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVM 46 (209)
T ss_dssp CCSCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred CCCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHH
Confidence 8888999999988888777 899999999999999999987765544
No 63
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=88.20 E-value=4.3 Score=36.52 Aligned_cols=114 Identities=17% Similarity=0.128 Sum_probs=62.3
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCCCc
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEGAE 84 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~~~ 84 (473)
||||+.--=+. +---+..|+++|.+.| +|+++.+....+-+-... .....+++..++ .+ .....
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~si---Tl~~pl~~~~~~----------~~-~~~~~ 64 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGI---TLHKPLRMYEVD----------LC-GFRAI 64 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSC---CCSSCBCEEEEE----------CS-SSEEE
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc---cCCCCeEEEEec----------cC-CCceE
Confidence 56766654333 2233788899998888 999999877655443321 222345555554 11 00001
Q ss_pred cCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcC-----------Cc---chHHHHHHHcCCCeEEEecc
Q 036520 85 ATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDV-----------MS---HWAGKIAQEYHVPLLLFSAF 146 (473)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~-----------~~---~~~~~~A~~lgiP~v~~~~~ 146 (473)
.....|.+... =.+..+ ..+||+||+-. +. .+|+.=|..+|||.|.++..
T Consensus 65 ~v~GTPaDCV~----------lal~~l--~~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 65 ATSGTPSDTVY----------LATFGL--GRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp EESSCHHHHHH----------HHHHHH--TSCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EECCcHHHHHH----------HHHhcC--CCCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 11222322111 122233 46899999742 11 23334467899999998763
No 64
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=88.03 E-value=12 Score=32.28 Aligned_cols=156 Identities=11% Similarity=-0.024 Sum_probs=87.8
Q ss_pred cccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHH
Q 036520 276 WLDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLE 355 (473)
Q Consensus 276 ~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ 355 (473)
|++-.+ +.++.|+.|.++ ...+..|.+.|..+.++-+.. .+.+.......++......-+.+
T Consensus 26 fl~L~g-k~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~----------~~~l~~l~~~~~i~~i~~~~~~~ 87 (223)
T 3dfz_A 26 MLDLKG-RSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTV----------SAEINEWEAKGQLRVKRKKVGEE 87 (223)
T ss_dssp EECCTT-CCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSC----------CHHHHHHHHTTSCEEECSCCCGG
T ss_pred EEEcCC-CEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCC----------CHHHHHHHHcCCcEEEECCCCHh
Confidence 444433 458999888665 455666777788887765421 11222222233444433222345
Q ss_pred HhhCCCcceeeeccCchhHHHHHhhCCceecccc-ccccccce-----eeeeecceEEEEecCCCCCcCHHHHHHHHHHH
Q 036520 356 ILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPL-IIDQPLNA-----RLLVDKDLAVQVERKDDGSFTRDGIAKALRLA 429 (473)
Q Consensus 356 ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~-~~DQ~~na-----~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~l 429 (473)
.|..+++ +|.--|.-.+.+.++.-.- ..+|+ ..|.+..+ ..+.+-++-+.+...+..-.-+..|++.|.++
T Consensus 88 dL~~adL--VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~~ 164 (223)
T 3dfz_A 88 DLLNVFF--IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLSSN 164 (223)
T ss_dssp GSSSCSE--EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred HhCCCCE--EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHHH
Confidence 5666666 8888887777666654333 34443 23554433 44555577777776521223456777778777
Q ss_pred hcCcchHHHHHHHHHHHHHhccCC
Q 036520 430 TVSEEGEKLRVRAREAANTFNDKK 453 (473)
Q Consensus 430 l~~~~~~~~~~~a~~~~~~~~~~~ 453 (473)
+-. .-..+.+.+.++++.++..-
T Consensus 165 lp~-~~~~~~~~~~~~R~~vk~~~ 187 (223)
T 3dfz_A 165 YDE-SYTQYTQFLYECRVLIHRLN 187 (223)
T ss_dssp SCT-HHHHHHHHHHHHHHHHHHCC
T ss_pred ccH-HHHHHHHHHHHHHHHHHHHC
Confidence 751 13578888888888887543
No 65
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=86.29 E-value=4.3 Score=39.96 Aligned_cols=107 Identities=18% Similarity=0.100 Sum_probs=67.5
Q ss_pred ceE-EecccchH---HHhhCCCcceeee---ccCc-hhHHHHHhhCC-----ceecccccc--ccccceeeeeecceEEE
Q 036520 344 GIV-SIGWAPQL---EILAHPSIGTSLF---HAGW-GSVIETLQFGH-----SLVVLPLII--DQPLNARLLVDKDLAVQ 408 (473)
Q Consensus 344 nv~-~~~~~pq~---~ll~~~~~~~~It---HGG~-~s~~eal~~Gv-----P~l~~P~~~--DQ~~na~~v~~~G~G~~ 408 (473)
+++ +.+++++. .++..+++ ||. .=|+ .++.||+++|+ |+|+-.+.+ ++.. -|+.
T Consensus 332 ~v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~---------~g~l 400 (482)
T 1uqt_A 332 PLYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---------SALI 400 (482)
T ss_dssp SEEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---------TSEE
T ss_pred eEEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhC---------CeEE
Confidence 355 45788874 56788888 654 3355 48999999998 666655432 3331 3555
Q ss_pred EecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHH
Q 036520 409 VERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFVEYLKI 468 (473)
Q Consensus 409 l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (473)
++.. +.++++++|.++|+.. ...-+++.++..+...+. +...-++.+++.+..
T Consensus 401 v~p~-----d~~~lA~ai~~lL~~~-~~~r~~~~~~~~~~v~~~-s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 401 VNPY-----DRDEVAAALDRALTMS-LAERISRHAEMLDVIVKN-DINHWQECFISDLKQ 453 (482)
T ss_dssp ECTT-----CHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHH
T ss_pred ECCC-----CHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHh
Confidence 6554 7899999999999831 123445555555555433 455566666665544
No 66
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=85.67 E-value=7.6 Score=34.10 Aligned_cols=116 Identities=15% Similarity=0.148 Sum_probs=62.7
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCCCc
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEGAE 84 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~~~ 84 (473)
||||+.--=+. |---+..|+++|.+.| +|+++.+....+-+-... .....+++..++....+ ++. ...
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si---Tl~~pl~~~~~~~~~~~-----~~~--~~~ 68 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAI---TIAHPVRAYPHPSPLHA-----PHF--PAY 68 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSC---CCSSCBEEEECCCCTTS-----CCC--CEE
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc---cCCCCeEEEEeccCcCC-----CCC--ceE
Confidence 56776654333 2333788899998888 899999877655443321 23345667666421000 010 001
Q ss_pred cCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcC----------Cc---chHHHHHHHcCCCeEEEec
Q 036520 85 ATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDV----------MS---HWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~----------~~---~~~~~~A~~lgiP~v~~~~ 145 (473)
.....|.+.... .+. + ..+||+||+-. +. ..|+.=|..+|||.|.++.
T Consensus 69 ~v~GTPaDCV~l----------al~--l-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 69 RVRGTPADCVAL----------GLH--L-FGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp EEESCHHHHHHH----------HHH--H-SCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEcCcHHHHHHH----------HHc--C-CCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 111222221111 111 2 45899999752 22 3344456789999999865
No 67
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=85.00 E-value=3.7 Score=36.32 Aligned_cols=43 Identities=14% Similarity=0.167 Sum_probs=30.1
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLP 48 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~ 48 (473)
+||||+.--=+. |---+..|+++|.+.| +|+++.+....+-+-
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g 43 (254)
T 2v4n_A 1 SMRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGAS 43 (254)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCT
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCcc
Confidence 478877665444 3334778899998775 999999877665443
No 68
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=83.10 E-value=1.2 Score=44.61 Aligned_cols=40 Identities=25% Similarity=0.155 Sum_probs=29.3
Q ss_pred CccEEEEecCCC------ccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 3 RKLHVVMLPWSA------FGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 3 ~~~~vl~~~~~~------~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
.+||||+++.-. .|=-.-+-.|+++|+++||+|+++++..
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y 53 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRY 53 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCc
Confidence 469999996421 2222346688999999999999999543
No 69
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=82.10 E-value=2.6 Score=35.08 Aligned_cols=101 Identities=16% Similarity=0.047 Sum_probs=53.3
Q ss_pred hhhhccccCCCCCcEEEEeecC-cccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEec
Q 036520 271 SKIFQWLDEQKPRSVVFVGFGS-ECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIG 349 (473)
Q Consensus 271 ~~~~~~l~~~~~~~~V~vs~Gs-~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~ 349 (473)
.++-++|.+.. ...||-|. .. .+....++..+.+-+++=+++.... ..++.. - ...++..
T Consensus 35 ~~lg~~La~~g---~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~~~------~~~~~~----~-~~~i~~~ 95 (176)
T 2iz6_A 35 NELGKQIATHG---WILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGPDT------SEISDA----V-DIPIVTG 95 (176)
T ss_dssp HHHHHHHHHTT---CEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC-----------CCTT----C-SEEEECC
T ss_pred HHHHHHHHHCC---CEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCchhh------hhhccC----C-ceeEEcC
Confidence 34555665543 55555554 33 2344455555556666666653211 111100 0 0133344
Q ss_pred ccch-HHHhhCCCcceeeeccCchhHHHH---HhhCCceeccccc
Q 036520 350 WAPQ-LEILAHPSIGTSLFHAGWGSVIET---LQFGHSLVVLPLI 390 (473)
Q Consensus 350 ~~pq-~~ll~~~~~~~~ItHGG~~s~~ea---l~~GvP~l~~P~~ 390 (473)
..++ ..++..-+-.+++--||.||..|+ +.+++|++++|.+
T Consensus 96 ~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 96 LGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp CCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred CHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 4554 334433333457777899886655 7799999999983
No 70
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=80.32 E-value=2.3 Score=35.32 Aligned_cols=43 Identities=12% Similarity=0.097 Sum_probs=35.4
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLP 48 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~ 48 (473)
+||++...|+.|=+. ...+.+.|.++|++|.++.++...+++.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFIN 48 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSC
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhh
Confidence 478888887766655 8999999999999999999888776654
No 71
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=80.14 E-value=9 Score=32.39 Aligned_cols=98 Identities=11% Similarity=0.066 Sum_probs=59.7
Q ss_pred EEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCC---CcccCCCeEEEEecCCccccccccCCCCCC
Q 036520 6 HVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAP---ESEVAALINFVEFPLPASAALDDKLLLPEG 82 (473)
Q Consensus 6 ~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~---~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~ 82 (473)
.|++++..+.|=..-.+.+|.+.+.+|++|.|+..-... ...+. -.+. ++.++... .++..
T Consensus 30 ~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~---~~~gE~~~l~~L--~v~~~~~g----------~gf~~- 93 (196)
T 1g5t_A 30 IIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGT---WPNGERNLLEPH--GVEFQVMA----------TGFTW- 93 (196)
T ss_dssp CEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCS---SCCHHHHHHGGG--TCEEEECC----------TTCCC-
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCC---CCccHHHHHHhC--CcEEEEcc----------ccccc-
Confidence 588888889999999999999999999999999754321 00000 0011 36666554 22211
Q ss_pred CccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCc
Q 036520 83 AEATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMS 126 (473)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~ 126 (473)
..... .--............+.+.+.++|+||.|-+.
T Consensus 94 ------~~~~~-~~~~~~a~~~l~~a~~~l~~~~yDlvILDEi~ 130 (196)
T 1g5t_A 94 ------ETQNR-EADTAACMAVWQHGKRMLADPLLDMVVLDELT 130 (196)
T ss_dssp ------CGGGH-HHHHHHHHHHHHHHHHHTTCTTCSEEEEETHH
T ss_pred ------CCCCc-HHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 11110 11112233345556667777899999999654
No 72
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=77.89 E-value=27 Score=32.05 Aligned_cols=36 Identities=19% Similarity=0.097 Sum_probs=24.8
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|.++|||+|+-.+. ..++.-++|.++||+|..+.+.
T Consensus 4 m~~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 4 MSQSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp ---CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECC
T ss_pred cccCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcC
Confidence 66789999986653 3445667888899999877664
No 73
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=77.73 E-value=11 Score=37.08 Aligned_cols=106 Identities=9% Similarity=-0.007 Sum_probs=69.1
Q ss_pred ceEEecccch---HHHhhCCCcceeee---ccCch-hHHHHHhhC---Cceecccccc--ccccceeeeeecceEEEEec
Q 036520 344 GIVSIGWAPQ---LEILAHPSIGTSLF---HAGWG-SVIETLQFG---HSLVVLPLII--DQPLNARLLVDKDLAVQVER 411 (473)
Q Consensus 344 nv~~~~~~pq---~~ll~~~~~~~~It---HGG~~-s~~eal~~G---vP~l~~P~~~--DQ~~na~~v~~~G~G~~l~~ 411 (473)
.|++...+|+ ..++..+++ |+. .=|+| +..|++++| .|+|+--+.+ ++.. .-|+.++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~--------~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVLG--------EYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG--------GGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC--------CCEEEECC
Confidence 5777778877 567778888 543 45887 568999996 5665554432 3221 13666766
Q ss_pred CCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHHHHH
Q 036520 412 KDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFVEYL 466 (473)
Q Consensus 412 ~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 466 (473)
. +.++++++|.++|+.. .++-+++.+++.+.+.+. ....-++.+++.+
T Consensus 423 ~-----D~~~lA~AI~~aL~m~-~~er~~r~~~~~~~V~~~-d~~~W~~~fl~~L 470 (496)
T 3t5t_A 423 F-----DLVEQAEAISAALAAG-PRQRAEAAARRRDAARPW-TLEAWVQAQLDGL 470 (496)
T ss_dssp T-----BHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHTTC-BHHHHHHHHHHHH
T ss_pred C-----CHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHH
Confidence 4 8999999999999732 345677777887777643 3344444444444
No 74
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=77.70 E-value=7.5 Score=39.74 Aligned_cols=41 Identities=12% Similarity=0.157 Sum_probs=30.9
Q ss_pred ecccch---------HHHhhCCCcceeeec---cCc-hhHHHHHhhCCceeccccc
Q 036520 348 IGWAPQ---------LEILAHPSIGTSLFH---AGW-GSVIETLQFGHSLVVLPLI 390 (473)
Q Consensus 348 ~~~~pq---------~~ll~~~~~~~~ItH---GG~-~s~~eal~~GvP~l~~P~~ 390 (473)
..|++. .++++.+++ ||.- =|+ .+.+||+++|+|+|+.-..
T Consensus 498 P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 498 PEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred ccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 367765 468888998 6543 344 5899999999999987654
No 75
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=75.50 E-value=4.4 Score=34.53 Aligned_cols=44 Identities=16% Similarity=-0.041 Sum_probs=35.3
Q ss_pred ccEEEEecCCCccChH-HHHHHHHHHHhCCCeEEEEeCCCccccCC
Q 036520 4 KLHVVMLPWSAFGHLM-PFFQLSIALAKSGVKVSFISTPKNIQRLP 48 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~-p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~ 48 (473)
+.||++.-.|+ +..+ -.+.+.+.|.++|++|.++.++....++.
T Consensus 7 ~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~ 51 (201)
T 3lqk_A 7 GKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTDT 51 (201)
T ss_dssp TCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTTC
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHHH
Confidence 35888887777 5555 79999999999999999999877665543
No 76
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=75.10 E-value=5.1 Score=37.11 Aligned_cols=42 Identities=5% Similarity=-0.057 Sum_probs=26.5
Q ss_pred hHHHHHHHhCCCcEEEEcCCc-chHHHHHHHcCCCeEEEecch
Q 036520 106 HPFKQFVAQQSVDWIIVDVMS-HWAGKIAQEYHVPLLLFSAFS 147 (473)
Q Consensus 106 ~~l~~ll~~~~pD~vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 147 (473)
+++.+.+++.+||++|+=.+. .-...+-+.....++-++++.
T Consensus 89 ~~~~~~l~~~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 89 PDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp HHHHHHHHTTCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred HHHHHHHHhcCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 456677889999999877553 333344444455567666543
No 77
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=74.28 E-value=11 Score=36.30 Aligned_cols=34 Identities=15% Similarity=0.217 Sum_probs=24.3
Q ss_pred HHHHHHHhCCCcEEEE--cCCcchHHHHHHHcCCCe
Q 036520 107 PFKQFVAQQSVDWIIV--DVMSHWAGKIAQEYHVPL 140 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~--D~~~~~~~~~A~~lgiP~ 140 (473)
.+.++.++.++|.|++ |.....+..+++.+|+|.
T Consensus 66 ~~~~~~~~~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 66 VVRQTFVEFPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHHHSCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHHhhhhcCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 4556667789999985 333345667889999994
No 78
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=71.45 E-value=13 Score=32.27 Aligned_cols=108 Identities=6% Similarity=-0.009 Sum_probs=60.1
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKS--GVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLP 80 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~ 80 (473)
++|||+|+.+++.. .+..+.++|.+. +++|..+.+.......... ....+|.+..++. ..+
T Consensus 21 ~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~----A~~~gIp~~~~~~---------~~~- 83 (229)
T 3auf_A 21 HMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLER----ARRAGVDALHMDP---------AAY- 83 (229)
T ss_dssp TCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHH----HHHTTCEEEECCG---------GGS-
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHH----HHHcCCCEEEECc---------ccc-
Confidence 44699998876643 366777788776 6888766543211110000 0113566655430 011
Q ss_pred CCCccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCc-chHHHHHHHcCCCeEEEec
Q 036520 81 EGAEATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMS-HWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~-~~~~~~A~~lgiP~v~~~~ 145 (473)
.. -+...+++.+.|++.+||+||+=.+. .....+-+...-.++-+.+
T Consensus 84 ------~~------------r~~~~~~~~~~l~~~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHp 131 (229)
T 3auf_A 84 ------PS------------RTAFDAALAERLQAYGVDLVCLAGYMRLVRGPMLTAFPNRILNIHP 131 (229)
T ss_dssp ------SS------------HHHHHHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHSTTCEEEEES
T ss_pred ------cc------------hhhccHHHHHHHHhcCCCEEEEcChhHhCCHHHHhhccCCEEEEcc
Confidence 00 01223456778889999999987653 4444555666666776644
No 79
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=70.71 E-value=6.8 Score=36.36 Aligned_cols=38 Identities=26% Similarity=0.265 Sum_probs=31.4
Q ss_pred cEEEEecC-CCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 5 LHVVMLPW-SAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 5 ~~vl~~~~-~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
++|+|+.. |+.|=..-...+|..|+++|++|.++..+.
T Consensus 16 ~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~ 54 (334)
T 3iqw_A 16 LRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDP 54 (334)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCS
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 46666554 677889999999999999999999998774
No 80
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=69.48 E-value=4.4 Score=33.87 Aligned_cols=46 Identities=9% Similarity=0.131 Sum_probs=36.0
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPK 49 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~ 49 (473)
|.+ ||++...|+.|=+ -...+.+.|.++|++|.++.++....++..
T Consensus 1 ~~k--~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 46 (181)
T 1g63_A 1 MYG--KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFINT 46 (181)
T ss_dssp CCC--CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSCG
T ss_pred CCC--EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 555 5888777776555 678999999999999999998887766543
No 81
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=69.11 E-value=4.6 Score=34.21 Aligned_cols=43 Identities=14% Similarity=0.098 Sum_probs=35.6
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhC-CCeEEEEeCCCccccCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKS-GVKVSFISTPKNIQRLP 48 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~-Gh~Vt~~~~~~~~~~~~ 48 (473)
|||++...|+.|-+. ...+.+.|.++ |++|.++.++....++.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 588888888877665 89999999999 99999999887665554
No 82
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=68.79 E-value=7.6 Score=33.24 Aligned_cols=44 Identities=18% Similarity=0.216 Sum_probs=36.6
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPK 49 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~ 49 (473)
++||++...++.+-+. ...+.+.|.++| +|.++.++....++..
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~~ 62 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLDK 62 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCCG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcCH
Confidence 3589998888888666 899999999999 9999998887766544
No 83
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=68.07 E-value=9.3 Score=35.08 Aligned_cols=97 Identities=14% Similarity=0.062 Sum_probs=0.0
Q ss_pred CCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC--------------CccccCCCCCCCcccCCCeEEEEecC
Q 036520 2 ARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP--------------KNIQRLPKPAPESEVAALINFVEFPL 67 (473)
Q Consensus 2 ~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~--------------~~~~~~~~~~~~~~~~~~i~~~~i~~ 67 (473)
+++|||+|+-.+..+ .+.-++|.++||+|..+.+. ...+...+. +|.+...
T Consensus 1 s~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~--------gIpv~~~-- 65 (314)
T 1fmt_A 1 SESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEK--------GLPVFQP-- 65 (314)
T ss_dssp CCCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHT--------TCCEECC--
T ss_pred CCCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHc--------CCcEEec--
Q ss_pred CccccccccCCCCCCCccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCc-chHHHHHHHcCCCeEEEecc
Q 036520 68 PASAALDDKLLLPEGAEATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMS-HWAGKIAQEYHVPLLLFSAF 146 (473)
Q Consensus 68 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~-~~~~~~A~~lgiP~v~~~~~ 146 (473)
+.+. .+++.+.+++.+||++|+=.+. .-...+-+.....++-++++
T Consensus 66 ---------~~~~------------------------~~~~~~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 112 (314)
T 1fmt_A 66 ---------VSLR------------------------PQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGS 112 (314)
T ss_dssp ---------SCSC------------------------SHHHHHHHHHTTCSEEEEESCCSCCCHHHHHSSTTCEEEEESS
T ss_pred ---------CCCC------------------------CHHHHHHHHhcCCCEEEEeeccccCCHHHHhhccCCEEEEcCC
No 84
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=66.77 E-value=9.4 Score=30.11 Aligned_cols=39 Identities=23% Similarity=0.158 Sum_probs=34.1
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
|. +.+|++.+.++-+|-....=++..|..+|++|..+..
T Consensus 1 ~~-~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~ 39 (137)
T 1ccw_A 1 ME-KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGV 39 (137)
T ss_dssp CC-CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CC-CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCC
Confidence 54 3489999999999999999999999999999997764
No 85
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=66.00 E-value=6.8 Score=33.47 Aligned_cols=42 Identities=7% Similarity=-0.092 Sum_probs=31.4
Q ss_pred CccEEEEecCCCccChHH-HHHHHHHHHhCCCeEEEEeCCCccc
Q 036520 3 RKLHVVMLPWSAFGHLMP-FFQLSIALAKSGVKVSFISTPKNIQ 45 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p-~l~la~~L~~~Gh~Vt~~~~~~~~~ 45 (473)
+..||++...|+ +..+- ...+.+.|.++|++|.++.++....
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~~ 46 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQS 46 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC----
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHHH
Confidence 345898887776 45665 8999999999999999999876553
No 86
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=65.21 E-value=5.9 Score=35.82 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=24.7
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
||||+. |+.|.+-. +|+++|.++||+|+.++-
T Consensus 1 MkILVT--GatGfIG~--~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIGT--ALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHHH--HHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--CCCCHHHH--HHHHHHHHCCCEEEEEEC
Confidence 787654 56666654 578999999999999874
No 87
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=64.10 E-value=13 Score=35.26 Aligned_cols=36 Identities=17% Similarity=0.086 Sum_probs=26.8
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|.+.++|+++-.+.. .+.+++++.+.|++|.++..+
T Consensus 4 m~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 4 MYDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp --CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred ccCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 555678999877653 366999999999999998653
No 88
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=63.31 E-value=6.6 Score=33.05 Aligned_cols=39 Identities=15% Similarity=0.391 Sum_probs=28.1
Q ss_pred CCCccEEEEecCCCccChHHHHH-HHHHHHhCCCeEEEEeC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQ-LSIALAKSGVKVSFIST 40 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~-la~~L~~~Gh~Vt~~~~ 40 (473)
|.+.|||+++.+. .|+..-+.. +++.|.+.|++|.++.-
T Consensus 1 M~~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l 40 (199)
T 2zki_A 1 MSCKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRV 40 (199)
T ss_dssp --CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CCCCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEeh
Confidence 6667899998888 888776655 45666667999988754
No 89
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=62.30 E-value=19 Score=30.90 Aligned_cols=106 Identities=5% Similarity=-0.005 Sum_probs=56.8
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCC--eEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGV--KVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEG 82 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh--~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~ 82 (473)
|||+|+.+++.+ -+.++.++|.+.+| +|..+.+.......... ....+|.+..++. ..+
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~----A~~~gIp~~~~~~---------~~~--- 62 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIER----CKKHNVECKVIQR---------KEF--- 62 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHH----HHHHTCCEEECCG---------GGS---
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHH----HHHcCCCEEEeCc---------ccc---
Confidence 578888776543 46777788888888 77655543211100000 0012454444320 000
Q ss_pred CccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCc-chHHHHHHHcCCCeEEEec
Q 036520 83 AEATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMS-HWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~-~~~~~~A~~lgiP~v~~~~ 145 (473)
.+ -+...+++.+.+++.+||++|+=.+. .-...+-+...-.++-+++
T Consensus 63 ----~~------------r~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 110 (216)
T 2ywr_A 63 ----PS------------KKEFEERMALELKKKGVELVVLAGFMRILSHNFLKYFPNKVINIHP 110 (216)
T ss_dssp ----SS------------HHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHTTSTTCEEEEES
T ss_pred ----cc------------hhhhhHHHHHHHHhcCCCEEEEeCchhhCCHHHHhhccCCeEEEcC
Confidence 00 11123456778889999999987553 3344444555556666644
No 90
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=62.30 E-value=54 Score=26.71 Aligned_cols=140 Identities=12% Similarity=0.106 Sum_probs=78.0
Q ss_pred CcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCc
Q 036520 283 RSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSI 362 (473)
Q Consensus 283 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~ 362 (473)
+|.|-|-+||.. +....+++...|+..|.++-+-+-+. -..|+.+.+..+ + .....+
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa-------HR~p~~l~~~~~-----------~---a~~~g~ 67 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA-------HRTPDYMFEYAE-----------T---ARERGL 67 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-------TTSHHHHHHHHH-----------H---TTTTTC
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec-------cCCHHHHHHHHH-----------H---HHhCCC
Confidence 457777788875 77888888888999988866555443 234443222211 0 001112
Q ss_pred ceeeeccCchhHHHHH---hhCCceecccccccc--cccee-eeee--cceEEEEecCCC--CCcCHHHHHHHHHHHhcC
Q 036520 363 GTSLFHAGWGSVIETL---QFGHSLVVLPLIIDQ--PLNAR-LLVD--KDLAVQVERKDD--GSFTRDGIAKALRLATVS 432 (473)
Q Consensus 363 ~~~ItHGG~~s~~eal---~~GvP~l~~P~~~DQ--~~na~-~v~~--~G~G~~l~~~~~--~~~t~~~l~~~i~~ll~~ 432 (473)
+++|.=.|...-+-.+ ..-+|+|.+|..... -..+. -+.+ .|+.+..-.- + +-.++.-++..|. -+.
T Consensus 68 ~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I-~~a~~~nAallAaqIl-a~~- 144 (170)
T 1xmp_A 68 KVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAI-GKAGSTNAGLLAAQIL-GSF- 144 (170)
T ss_dssp CEEEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCS-SHHHHHHHHHHHHHHH-HTT-
T ss_pred cEEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEec-CCcchHHHHHHHHHHH-ccC-
Confidence 3477777654333222 246899999985421 11111 1223 4665322111 0 1356666666554 334
Q ss_pred cchHHHHHHHHHHHHHhc
Q 036520 433 EEGEKLRVRAREAANTFN 450 (473)
Q Consensus 433 ~~~~~~~~~a~~~~~~~~ 450 (473)
+++++++.+.+++.++
T Consensus 145 --d~~l~~kl~~~r~~~~ 160 (170)
T 1xmp_A 145 --HDDIHDALELRREAIE 160 (170)
T ss_dssp --CHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHH
Confidence 6899999999988876
No 91
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=61.85 E-value=45 Score=29.37 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=24.4
Q ss_pred CCCcEEE-EcCCc-chHHHHHHHcCCCeEEEecch
Q 036520 115 QSVDWII-VDVMS-HWAGKIAQEYHVPLLLFSAFS 147 (473)
Q Consensus 115 ~~pD~vI-~D~~~-~~~~~~A~~lgiP~v~~~~~~ 147 (473)
..||+|| .|+.. .-++.=|.++|||.|.+.-+.
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 3789655 67644 467777999999999986543
No 92
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=61.63 E-value=11 Score=32.43 Aligned_cols=104 Identities=14% Similarity=0.119 Sum_probs=56.3
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhC--CCeEEEEeCCC-ccccCCCCCCCcccCCCeEEEEecCCccccccccC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKS--GVKVSFISTPK-NIQRLPKPAPESEVAALINFVEFPLPASAALDDKL 77 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~-~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~ 77 (473)
|.+++||+++.++..+- +..+.+++.+. +++|..+.+.. .....+. ....+|.+..++. .
T Consensus 5 ~~~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~-----A~~~gIp~~~~~~---------~ 67 (215)
T 3kcq_A 5 MKKELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLI-----AQSYGIPTFVVKR---------K 67 (215)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHH-----HHHTTCCEEECCB---------T
T ss_pred CCCCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHH-----HHHcCCCEEEeCc---------c
Confidence 67788999888765433 44455555443 37888776532 1110000 0012555554430 0
Q ss_pred CCCCCCccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCc-chHHHHHHHcCCCeEEEec
Q 036520 78 LLPEGAEATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMS-HWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 78 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~-~~~~~~A~~lgiP~v~~~~ 145 (473)
.+ . .+++.+.+++.+||+||.=.+. .-...+-+...-.++-+++
T Consensus 68 ~~-------~-----------------~~~~~~~L~~~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHp 112 (215)
T 3kcq_A 68 PL-------D-----------------IEHISTVLREHDVDLVCLAGFMSILPEKFVTDWHHKIINIHP 112 (215)
T ss_dssp TB-------C-----------------HHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred cC-------C-----------------hHHHHHHHHHhCCCEEEEeCCceEeCHHHHhhccCCeEEECc
Confidence 00 0 1567788899999999987653 4444555556566676644
No 93
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=60.79 E-value=91 Score=27.73 Aligned_cols=156 Identities=14% Similarity=-0.006 Sum_probs=81.0
Q ss_pred cccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhc---------------
Q 036520 276 WLDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTI--------------- 340 (473)
Q Consensus 276 ~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~--------------- 340 (473)
|++-.+ +.++.|+.|..+ ...+..|.+.|.++.++-+.... .+.+.+....
T Consensus 8 ~~~l~~-k~VLVVGgG~va-------~rka~~Ll~~Ga~VtViap~~~~------~l~~~~~~l~~~~~~~~~~~~~~~~ 73 (274)
T 1kyq_A 8 AHQLKD-KRILLIGGGEVG-------LTRLYKLMPTGCKLTLVSPDLHK------SIIPKFGKFIQNKDQPDYREDAKRF 73 (274)
T ss_dssp EECCTT-CEEEEEEESHHH-------HHHHHHHGGGTCEEEEEEEEECT------THHHHHCGGGC-----------CEE
T ss_pred EEEcCC-CEEEEECCcHHH-------HHHHHHHHhCCCEEEEEcCCCCc------chhHHHHHHHhccccccccchhhcc
Confidence 344333 458899888765 55666777888888777553211 0100111111
Q ss_pred -------CCCce-EEecccchHHHhh------CCCcceeeeccCchhHHHHHh-----h---CCceecccccccccccee
Q 036520 341 -------RGKGI-VSIGWAPQLEILA------HPSIGTSLFHAGWGSVIETLQ-----F---GHSLVVLPLIIDQPLNAR 398 (473)
Q Consensus 341 -------~~~nv-~~~~~~pq~~ll~------~~~~~~~ItHGG~~s~~eal~-----~---GvP~l~~P~~~DQ~~na~ 398 (473)
...++ ....---....|. .+++ +|.--|...+.+.++ . |+|+-++ |.+..+.
T Consensus 74 ~~~~~~~~~g~i~~~i~~~~~~~dL~~l~~~~~adl--Viaat~d~~~n~~I~~~Ar~~f~~~i~VNvv----d~pel~~ 147 (274)
T 1kyq_A 74 INPNWDPTKNEIYEYIRSDFKDEYLDLENENDAWYI--IMTCIPDHPESARIYHLCKERFGKQQLVNVA----DKPDLCD 147 (274)
T ss_dssp ECTTCCTTSCCCSEEECSSCCGGGGCCSSTTCCEEE--EEECCSCHHHHHHHHHHHHHHHCTTSEEEET----TCGGGBS
T ss_pred cccccccccCCeeEEEcCCCCHHHHhhcccCCCeEE--EEEcCCChHHHHHHHHHHHHhcCCCcEEEEC----CCcccCe
Confidence 12233 2221111223343 4444 787777665555443 2 5555222 4444443
Q ss_pred -----eeeecc-eEEEEecCCCCCcCHHHHHHHHHHHh---cCcchHHHHHHHHHHHHHhcc
Q 036520 399 -----LLVDKD-LAVQVERKDDGSFTRDGIAKALRLAT---VSEEGEKLRVRAREAANTFND 451 (473)
Q Consensus 399 -----~v~~~G-~G~~l~~~~~~~~t~~~l~~~i~~ll---~~~~~~~~~~~a~~~~~~~~~ 451 (473)
.+.+-+ +-+.+........-+..|++.|.+++ .+..-..+.+.+.++++.++.
T Consensus 148 f~~Pa~~~~g~~l~IaIST~Gksp~lA~~ir~~ie~~l~~~p~~~~~~~~~~l~~~R~~ik~ 209 (274)
T 1kyq_A 148 FYFGANLEIGDRLQILISTNGLSPRFGALVRDEIRNLFTQMGDLALEDAVVKLGELRRGIRL 209 (274)
T ss_dssp EECCEEEEETTTEEEEEEESSSCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_pred eEeeeEEEeCCCEEEEEECCCCCcHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh
Confidence 445545 55555554212234567888888888 311135677778888877764
No 94
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=60.47 E-value=7.5 Score=29.75 Aligned_cols=42 Identities=10% Similarity=0.037 Sum_probs=30.9
Q ss_pred CCCccEEEEecCCCc-cCh-HHHHHHHHHHHhCC--CeEEEEeCCC
Q 036520 1 MARKLHVVMLPWSAF-GHL-MPFFQLSIALAKSG--VKVSFISTPK 42 (473)
Q Consensus 1 m~~~~~vl~~~~~~~-gH~-~p~l~la~~L~~~G--h~Vt~~~~~~ 42 (473)
|+.+||++|+-+... -.. +..+..|..+.++| |+|.++....
T Consensus 4 ~~~~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~ 49 (117)
T 2fb6_A 4 MSANDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGA 49 (117)
T ss_dssp SSTTSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSH
T ss_pred cccCCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECC
Confidence 667789988777643 222 34778899999999 8999987544
No 95
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=60.22 E-value=8.7 Score=31.32 Aligned_cols=39 Identities=21% Similarity=0.222 Sum_probs=34.9
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
++.+|++.+.++-.|-....-++..|..+|++|.++...
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 457999999999999999999999999999999987643
No 96
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=58.94 E-value=4.2 Score=36.56 Aligned_cols=51 Identities=8% Similarity=0.071 Sum_probs=36.8
Q ss_pred ceeeeccCchhHHHHHhh------CCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcC
Q 036520 363 GTSLFHAGWGSVIETLQF------GHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVS 432 (473)
Q Consensus 363 ~~~ItHGG~~s~~eal~~------GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~ 432 (473)
+++|+=||-||+++++.. ++|++++|... .|. .. .+.++++.++++++++|
T Consensus 37 D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G~-----------lgf-----l~---~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 37 EIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTGH-----------LGF-----YA---DWRPAEADKLVKLLAKG 93 (272)
T ss_dssp SEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESSS-----------CCS-----SC---CBCGGGHHHHHHHHHTT
T ss_pred CEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCCC-----------CCc-----CC---cCCHHHHHHHHHHHHcC
Confidence 349999999999999765 88999887621 111 11 34567888889888874
No 97
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=58.27 E-value=28 Score=28.27 Aligned_cols=140 Identities=13% Similarity=0.056 Sum_probs=75.0
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcc
Q 036520 284 SVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIG 363 (473)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~ 363 (473)
+.|-|-+||.. +....+++...|+..|..+-+.+-+. ...|+.+.+.. .-+....++
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa-------HRtp~~l~~~~--------------~~~~~~g~~ 62 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSA-------HRTPDKMFDYA--------------ETAKERGLK 62 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT-------TTCHHHHHHHH--------------HHTTTTTCC
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcC-------cCCHHHHHHHH--------------HHHHhCCCc
Confidence 35677778765 67778888888888888765555432 22344222211 011112234
Q ss_pred eeeeccCchhHHHHH---hhCCceeccccccccc-cceee--e--eecceEEEEecCC-CCCcCHHHHHHHHHHHhcCcc
Q 036520 364 TSLFHAGWGSVIETL---QFGHSLVVLPLIIDQP-LNARL--L--VDKDLAVQVERKD-DGSFTRDGIAKALRLATVSEE 434 (473)
Q Consensus 364 ~~ItHGG~~s~~eal---~~GvP~l~~P~~~DQ~-~na~~--v--~~~G~G~~l~~~~-~~~~t~~~l~~~i~~ll~~~~ 434 (473)
+||.=.|...-+-++ ..-+|+|.+|...-.. ..... + .-.|+++..-.-+ .+-.++..++..|-.+ .
T Consensus 63 ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il~~-~--- 138 (166)
T 3oow_A 63 VIIAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQH-T--- 138 (166)
T ss_dssp EEEEEECSSCCHHHHHHHTCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHGG-G---
T ss_pred EEEEECCcchhhHHHHHhccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHcC-C---
Confidence 488877764332222 2458999999843211 11111 1 2225544332210 0123455555444333 3
Q ss_pred hHHHHHHHHHHHHHhc
Q 036520 435 GEKLRVRAREAANTFN 450 (473)
Q Consensus 435 ~~~~~~~a~~~~~~~~ 450 (473)
|++++++.+.+++.++
T Consensus 139 d~~l~~kl~~~r~~~~ 154 (166)
T 3oow_A 139 DINIAKALAEFRAEQT 154 (166)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 6899999999888775
No 98
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=58.21 E-value=9.8 Score=32.47 Aligned_cols=45 Identities=20% Similarity=0.246 Sum_probs=34.1
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHh-CCCeEEEEeCCCccccCCC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAK-SGVKVSFISTPKNIQRLPK 49 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~-~Gh~Vt~~~~~~~~~~~~~ 49 (473)
+.||++...|+.+=+ -...+.+.|.+ +|++|.++.++....++..
T Consensus 19 ~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~ 64 (206)
T 1qzu_A 19 KFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHFYSP 64 (206)
T ss_dssp SEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGSSCG
T ss_pred CCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHHhCH
Confidence 357888888777644 46999999999 8999999998887766644
No 99
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=57.77 E-value=4.8 Score=34.04 Aligned_cols=44 Identities=5% Similarity=0.010 Sum_probs=35.4
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLP 48 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~ 48 (473)
+.||++...|+.|=+. ...+.+.|.++|++|.++.++....++.
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 51 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIP 51 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSC
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 3488888887776665 7899999999999999999887665554
No 100
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=57.13 E-value=12 Score=35.01 Aligned_cols=39 Identities=18% Similarity=0.220 Sum_probs=32.2
Q ss_pred ccEEEEecC-CCccChHHHHHHHHHHH--hCCCeEEEEeCCC
Q 036520 4 KLHVVMLPW-SAFGHLMPFFQLSIALA--KSGVKVSFISTPK 42 (473)
Q Consensus 4 ~~~vl~~~~-~~~gH~~p~l~la~~L~--~~Gh~Vt~~~~~~ 42 (473)
+++|+++.. ++.|=..-...+|..|+ ++|++|.++..+.
T Consensus 17 ~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~ 58 (348)
T 3io3_A 17 SLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDP 58 (348)
T ss_dssp TCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 356766655 67799999999999999 8999999998764
No 101
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=55.53 E-value=17 Score=30.48 Aligned_cols=42 Identities=14% Similarity=0.083 Sum_probs=35.0
Q ss_pred EEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCC
Q 036520 6 HVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLP 48 (473)
Q Consensus 6 ~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~ 48 (473)
||++...|+.|-+ =...+.++|.++|++|.++.++....++.
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~ 44 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLK 44 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhh
Confidence 7999888888854 68999999999999999999887665554
No 102
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=54.68 E-value=40 Score=28.73 Aligned_cols=106 Identities=8% Similarity=0.081 Sum_probs=57.9
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKS--GVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEG 82 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~ 82 (473)
|||+++.+++.+ -+.++.++|.+. +|+|..+.+......+... ....+|.+..++. ..+
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~----A~~~gIp~~~~~~---------~~~--- 64 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIER----AARENVPAFVFSP---------KDY--- 64 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHH----HHHTTCCEEECCG---------GGS---
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHH----HHHcCCCEEEeCc---------ccc---
Confidence 578888776543 366677788776 6899866654211111000 0012555544330 000
Q ss_pred CccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCc-chHHHHHHHcCCCeEEEec
Q 036520 83 AEATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMS-HWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~-~~~~~~A~~lgiP~v~~~~ 145 (473)
.+ -+...+++.+.+++.+||++|.=.+. .-...+-+...-.++-+++
T Consensus 65 ----~~------------~~~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 112 (212)
T 3av3_A 65 ----PS------------KAAFESEILRELKGRQIDWIALAGYMRLIGPTLLSAYEGKIVNIHP 112 (212)
T ss_dssp ----SS------------HHHHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHTTTCEEEEES
T ss_pred ----cc------------hhhhHHHHHHHHHhcCCCEEEEchhhhhCCHHHHhhhcCCEEEEec
Confidence 00 01123456778889999999987653 4444555666666776644
No 103
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=54.57 E-value=12 Score=34.43 Aligned_cols=33 Identities=12% Similarity=0.167 Sum_probs=27.5
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
+|+|+++..+ ....+++++.++||+|.++....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 5799998876 56789999999999999887654
No 104
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=53.74 E-value=54 Score=26.95 Aligned_cols=140 Identities=11% Similarity=0.068 Sum_probs=76.1
Q ss_pred CcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCc
Q 036520 283 RSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSI 362 (473)
Q Consensus 283 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~ 362 (473)
++.|-|-+||.. +...++++.+.|++.|..+-+.+-+.- ..|+.+.+..+ -.....+
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SAH-------Rtp~~l~~~~~--------------~a~~~g~ 78 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAH-------RTPDYMFEYAE--------------TARERGL 78 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT-------TSHHHHHHHHH--------------HTTTTTC
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEccc-------cChHHHHHHHH--------------HHHhcCc
Confidence 457888899876 777888899999999988766655432 23443222211 0011123
Q ss_pred ceeeeccCch----hHHHHHhhCCceeccccccccc---cceeeeeec--ceEEEEecCC-CCCcCHHHHHHHHHHHhcC
Q 036520 363 GTSLFHAGWG----SVIETLQFGHSLVVLPLIIDQP---LNARLLVDK--DLAVQVERKD-DGSFTRDGIAKALRLATVS 432 (473)
Q Consensus 363 ~~~ItHGG~~----s~~eal~~GvP~l~~P~~~DQ~---~na~~v~~~--G~G~~l~~~~-~~~~t~~~l~~~i~~ll~~ 432 (473)
+++|.=.|.- ++..+ ..-+|+|.+|....-. +.-.-+.+. |+.+.--..+ .+..++.-++..|-. +.
T Consensus 79 ~ViIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQMP~GvpVaTvaig~~ga~NAallA~qILa-~~- 155 (181)
T 4b4k_A 79 KVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILG-SF- 155 (181)
T ss_dssp CEEEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHTCCTTCCCEECCSSHHHHHHHHHHHHHHHT-TT-
T ss_pred eEEEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHhCCCCCceEEEecCCccHHHHHHHHHHHHc-cC-
Confidence 3377666653 33333 4568999999854321 111112222 5544332210 011234444444422 23
Q ss_pred cchHHHHHHHHHHHHHhc
Q 036520 433 EEGEKLRVRAREAANTFN 450 (473)
Q Consensus 433 ~~~~~~~~~a~~~~~~~~ 450 (473)
|++++++.+.+++.++
T Consensus 156 --d~~l~~kl~~~r~~~~ 171 (181)
T 4b4k_A 156 --HDDIHDALELRREAIE 171 (181)
T ss_dssp --CHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHH
Confidence 6889999888887765
No 105
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=53.52 E-value=11 Score=32.15 Aligned_cols=38 Identities=18% Similarity=0.227 Sum_probs=26.5
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
|.+.|+|++. |+.|.+- ..+++.|.++||+|+.+....
T Consensus 1 M~~m~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 1 MEKVKKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp --CCCEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSCG
T ss_pred CCCCCEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcCc
Confidence 6666777665 4555554 467899999999999987543
No 106
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=53.22 E-value=19 Score=26.98 Aligned_cols=36 Identities=3% Similarity=0.087 Sum_probs=28.5
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEE
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFI 38 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~ 38 (473)
+.|||+++|..+.|+-.-.-.+-+.+.++|.++.+-
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~ 38 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIE 38 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEE
Confidence 458999999999988866667778888889876643
No 107
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=52.33 E-value=16 Score=28.53 Aligned_cols=41 Identities=5% Similarity=-0.045 Sum_probs=30.1
Q ss_pred cEEEEecCCC---ccChHHHHHHHHHHHhCCCeEEEEeCCCccc
Q 036520 5 LHVVMLPWSA---FGHLMPFFQLSIALAKSGVKVSFISTPKNIQ 45 (473)
Q Consensus 5 ~~vl~~~~~~---~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~ 45 (473)
++++|+...+ .......+.+|...+..||+|+++-......
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~ 59 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPX 59 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGG
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHH
Confidence 4676655543 4667788899999999999999877655444
No 108
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=52.19 E-value=18 Score=30.74 Aligned_cols=38 Identities=13% Similarity=0.006 Sum_probs=34.6
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
+.+|++.+.++-.|-....-++..|..+|++|.++...
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~ 125 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD 125 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 45899999999999999999999999999999988754
No 109
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=51.69 E-value=1.7e+02 Score=28.12 Aligned_cols=148 Identities=11% Similarity=-0.054 Sum_probs=77.4
Q ss_pred CcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCc
Q 036520 283 RSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSI 362 (473)
Q Consensus 283 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~ 362 (473)
+.++.|+.|..+ ...++.|.+.|.++.++-+.. .+.+.+.....++....---+...|..+++
T Consensus 13 ~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~~----------~~~~~~l~~~~~i~~~~~~~~~~~l~~~~l 75 (457)
T 1pjq_A 13 RDCLIVGGGDVA-------ERKARLLLEAGARLTVNALTF----------IPQFTVWANEGMLTLVEGPFDETLLDSCWL 75 (457)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESSC----------CHHHHHHHTTTSCEEEESSCCGGGGTTCSE
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCCC----------CHHHHHHHhcCCEEEEECCCCccccCCccE
Confidence 458888888765 445566667788877765421 112222222234443221122344555666
Q ss_pred ceeeeccCchh-----HHHHHhhCCce--eccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcch
Q 036520 363 GTSLFHAGWGS-----VIETLQFGHSL--VVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEG 435 (473)
Q Consensus 363 ~~~ItHGG~~s-----~~eal~~GvP~--l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~ 435 (473)
+|.--|.-. ..+|-..|+|+ +--|-..+...-| .+.+.++=+.+..+.....-+..|++.|.+++..+ -
T Consensus 76 --Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa-~~~~~~l~iaIsT~Gksp~la~~ir~~ie~~l~~~-~ 151 (457)
T 1pjq_A 76 --AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPS-IIDRSPLMVAVSSGGTSPVLARLLREKLESLLPQH-L 151 (457)
T ss_dssp --EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCE-EEEETTEEEEEECTTSCHHHHHHHHHHHHHHSCTT-H
T ss_pred --EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeee-EEEeCCeEEEEECCCCChHHHHHHHHHHHHhcchh-H
Confidence 887777654 34455678886 3333333332222 12334444444443111122567888888888621 2
Q ss_pred HHHHHHHHHHHHHhcc
Q 036520 436 EKLRVRAREAANTFND 451 (473)
Q Consensus 436 ~~~~~~a~~~~~~~~~ 451 (473)
..+.+.+.++++.++.
T Consensus 152 ~~~~~~~~~~R~~~~~ 167 (457)
T 1pjq_A 152 GQVARYAGQLRARVKK 167 (457)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4566666677766654
No 110
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=51.40 E-value=18 Score=27.89 Aligned_cols=33 Identities=15% Similarity=0.343 Sum_probs=24.6
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
.|||+++ +.|.+-. .+++.|.++||+|+++...
T Consensus 4 ~m~i~Ii---G~G~iG~--~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIA---GIGRVGY--TLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEE---CCSHHHH--HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEE---CCCHHHH--HHHHHHHhCCCeEEEEECC
Confidence 4788888 2366654 5789999999999988653
No 111
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=51.28 E-value=18 Score=32.95 Aligned_cols=56 Identities=11% Similarity=0.114 Sum_probs=36.1
Q ss_pred HhhCCCcceeeeccCchhHHHHHhh----CCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhc
Q 036520 356 ILAHPSIGTSLFHAGWGSVIETLQF----GHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATV 431 (473)
Q Consensus 356 ll~~~~~~~~ItHGG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~ 431 (473)
....+++ +|+-||-||+++++.. ++|+++++... .|. + . .+..+++.++++.+++
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G~-----------~gf---l--~---~~~~~~~~~~~~~i~~ 130 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNLGR-----------IGF---L--A---EAEAEAIDAVLEHVVA 130 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEECSS-----------CCS---S--C---SEEGGGHHHHHHHHHH
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeCCC-----------Ccc---C--c---ccCHHHHHHHHHHHHc
Confidence 3445666 9999999999999754 88999887421 111 0 0 2345677788888877
Q ss_pred C
Q 036520 432 S 432 (473)
Q Consensus 432 ~ 432 (473)
|
T Consensus 131 g 131 (307)
T 1u0t_A 131 Q 131 (307)
T ss_dssp T
T ss_pred C
Confidence 3
No 112
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=51.20 E-value=23 Score=31.36 Aligned_cols=38 Identities=18% Similarity=-0.026 Sum_probs=34.7
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
++.+|++.+.++-.|-....-++..|..+|++|.++..
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~ 159 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGR 159 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCC
Confidence 35689999999999999999999999999999998874
No 113
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=51.08 E-value=22 Score=27.55 Aligned_cols=42 Identities=7% Similarity=0.162 Sum_probs=29.0
Q ss_pred cEEEE-ecCCCcc--ChHHHHHHHHHHHhCCCeE-EEEeCCCcccc
Q 036520 5 LHVVM-LPWSAFG--HLMPFFQLSIALAKSGVKV-SFISTPKNIQR 46 (473)
Q Consensus 5 ~~vl~-~~~~~~g--H~~p~l~la~~L~~~Gh~V-t~~~~~~~~~~ 46 (473)
|++++ +..+.+| .....+.+|.++.+.||+| +++-..+....
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~~ 46 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGVNN 46 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGGG
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHHHH
Confidence 45544 3444443 4567899999999999999 87776655443
No 114
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=50.93 E-value=49 Score=28.20 Aligned_cols=106 Identities=10% Similarity=-0.023 Sum_probs=58.3
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKS--GVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEG 82 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~ 82 (473)
|||+++.++..+ -+..|.+++.+. +|+|..+.+.......... ....++.+..++. ..+.
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~----A~~~gIp~~~~~~---------~~~~-- 62 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLER----ARQAGIATHTLIA---------SAFD-- 62 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHH----HHHTTCEEEECCG---------GGCS--
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHH----HHHcCCcEEEeCc---------cccc--
Confidence 478887775553 366677777665 5888866554311111000 0113666655430 0110
Q ss_pred CccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCc-chHHHHHHHcCCCeEEEec
Q 036520 83 AEATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMS-HWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~-~~~~~~A~~lgiP~v~~~~ 145 (473)
+ -+...+++.+.+++.+||+||+=.+. .-...+-+...-.++-+++
T Consensus 63 -----~------------r~~~~~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 109 (212)
T 1jkx_A 63 -----S------------REAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHP 109 (212)
T ss_dssp -----S------------HHHHHHHHHHHHGGGCCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred -----c------------hhhccHHHHHHHHhcCCCEEEEeChhhhCCHHHHhhccCCEEEEcc
Confidence 0 01223456788899999999987653 3444555666666776654
No 115
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=50.87 E-value=26 Score=28.90 Aligned_cols=41 Identities=17% Similarity=0.198 Sum_probs=28.0
Q ss_pred CCCccEEEEecCC-CccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 1 MARKLHVVMLPWS-AFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 1 m~~~~~vl~~~~~-~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
|++..+++++... ++= -.=++...+.|.+.|++|++++...
T Consensus 4 m~~t~~~v~il~~~gFe-~~E~~~p~~~l~~ag~~V~~~s~~~ 45 (177)
T 4hcj_A 4 MGKTNNILYVMSGQNFQ-DEEYFESKKIFESAGYKTKVSSTFI 45 (177)
T ss_dssp -CCCCEEEEECCSEEEC-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cccCCCEEEEECCCCcc-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 7777777665543 332 2335667788999999999998654
No 116
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=49.82 E-value=76 Score=25.95 Aligned_cols=138 Identities=14% Similarity=0.071 Sum_probs=77.5
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcc
Q 036520 284 SVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIG 363 (473)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~ 363 (473)
+.|-|-+||.. +....+++...|+..|.++-+-+-+. ...|+.+.+.. -. .--...++
T Consensus 8 ~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~Sa-------HR~p~~~~~~~-----------~~-a~~~g~~V- 65 (174)
T 3lp6_A 8 PRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSA-------HRTPEAMFSYA-----------RG-AAARGLEV- 65 (174)
T ss_dssp CSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT-------TTCHHHHHHHH-----------HH-HHHHTCCE-
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECC-------CCCHHHHHHHH-----------HH-HHhCCCCE-
Confidence 35666678765 67778888888889888866555443 23344222211 00 00122344
Q ss_pred eeeeccCch----hHHHHHhhCCceeccccccccc-cce-ee-e--eecceEEEEecCCCCCcCHHHHHHHHHHHhcCcc
Q 036520 364 TSLFHAGWG----SVIETLQFGHSLVVLPLIIDQP-LNA-RL-L--VDKDLAVQVERKDDGSFTRDGIAKALRLATVSEE 434 (473)
Q Consensus 364 ~~ItHGG~~----s~~eal~~GvP~l~~P~~~DQ~-~na-~~-v--~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~ 434 (473)
+|.=.|.. ++..++ .-+|+|.+|...-.. ... .. + .-.|+.+..-.- ++-.++..++..|-.+ .
T Consensus 66 -iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I-~~~~nAa~lAa~Il~~-~--- 138 (174)
T 3lp6_A 66 -IIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSI-GGAGNAGLLAVRMLGA-A--- 138 (174)
T ss_dssp -EEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCT-TCHHHHHHHHHHHHHT-T---
T ss_pred -EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEc-CcchHHHHHHHHHHhC-C---
Confidence 88777753 444443 568999999753211 011 00 1 123643332211 1255666666665444 3
Q ss_pred hHHHHHHHHHHHHHhc
Q 036520 435 GEKLRVRAREAANTFN 450 (473)
Q Consensus 435 ~~~~~~~a~~~~~~~~ 450 (473)
+++++++.+.+++.++
T Consensus 139 d~~l~~kl~~~r~~~~ 154 (174)
T 3lp6_A 139 NPQLRARIVAFQDRLA 154 (174)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 5899999999988876
No 117
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=49.69 E-value=30 Score=28.28 Aligned_cols=140 Identities=14% Similarity=0.077 Sum_probs=75.8
Q ss_pred CcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCc
Q 036520 283 RSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSI 362 (473)
Q Consensus 283 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~ 362 (473)
.|.|-|-+||.. +....++....|+..|.++-+.+-+. ...|+.+.+..+ . ...-.+
T Consensus 12 ~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa-------HR~p~~l~~~~~-----------~---a~~~g~ 68 (173)
T 4grd_A 12 APLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA-------HRMPDEMFDYAE-----------K---ARERGL 68 (173)
T ss_dssp SCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-------TTSHHHHHHHHH-----------H---HTTTTC
T ss_pred CCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc-------ccCHHHHHHHHH-----------H---HHhcCC
Confidence 457888889875 77788888888999998866555443 234443222110 0 011123
Q ss_pred ceeeeccCch----hHHHHHhhCCceecccccccc---ccceeeeeec--ceEEEEecC-CCCCcCHHHHHHHHHHHhcC
Q 036520 363 GTSLFHAGWG----SVIETLQFGHSLVVLPLIIDQ---PLNARLLVDK--DLAVQVERK-DDGSFTRDGIAKALRLATVS 432 (473)
Q Consensus 363 ~~~ItHGG~~----s~~eal~~GvP~l~~P~~~DQ---~~na~~v~~~--G~G~~l~~~-~~~~~t~~~l~~~i~~ll~~ 432 (473)
+++|.-.|.- ++..+ ..-+|+|.+|....- .+--.-+.+. |+.+..-.- .++..++.-++..|-. +.
T Consensus 69 ~ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~~ILa-~~- 145 (173)
T 4grd_A 69 RAIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVSILS-GN- 145 (173)
T ss_dssp SEEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHT-TS-
T ss_pred eEEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHHHHHc-CC-
Confidence 3366665542 44444 457999999974321 1111111122 554433211 0113344445544422 24
Q ss_pred cchHHHHHHHHHHHHHhc
Q 036520 433 EEGEKLRVRAREAANTFN 450 (473)
Q Consensus 433 ~~~~~~~~~a~~~~~~~~ 450 (473)
+++++++.+.+++.++
T Consensus 146 --d~~l~~kl~~~r~~~~ 161 (173)
T 4grd_A 146 --SVDYANRLAAFRVRQN 161 (173)
T ss_dssp --CHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHH
Confidence 6889999988888765
No 118
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=48.88 E-value=1e+02 Score=25.44 Aligned_cols=138 Identities=15% Similarity=0.098 Sum_probs=77.2
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcc
Q 036520 284 SVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIG 363 (473)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~ 363 (473)
+.|-|-+||.. +....+++...|+..|.++-+-+-+. ...|+.+.+..+ + .....++
T Consensus 22 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa-------HR~p~~l~~~~~-----------~---a~~~g~~ 78 (182)
T 1u11_A 22 PVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSA-------HRTPDRLADYAR-----------T---AAERGLN 78 (182)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-------TTCHHHHHHHHH-----------H---TTTTTCC
T ss_pred CEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcc-------cCCHHHHHHHHH-----------H---HHhCCCc
Confidence 35666678765 77888888888889988866555443 233442222111 0 0011123
Q ss_pred eeeeccCch----hHHHHHhhCCceecccccccc--cccee-eeee--cceEEEEecCCC--CCcCHHHHHHHHHHHhcC
Q 036520 364 TSLFHAGWG----SVIETLQFGHSLVVLPLIIDQ--PLNAR-LLVD--KDLAVQVERKDD--GSFTRDGIAKALRLATVS 432 (473)
Q Consensus 364 ~~ItHGG~~----s~~eal~~GvP~l~~P~~~DQ--~~na~-~v~~--~G~G~~l~~~~~--~~~t~~~l~~~i~~ll~~ 432 (473)
++|.-.|.. ++..++ .-+|+|.+|..... -..+. -+.+ .|+.+..-.- + +-.++.-++..|. -+.
T Consensus 79 ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~I-~~a~~~nAallAaqIl-a~~- 154 (182)
T 1u11_A 79 VIIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAI-GASGAKNAALLAASIL-ALY- 154 (182)
T ss_dssp EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCS-SHHHHHHHHHHHHHHH-GGG-
T ss_pred EEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCceEEEec-CCccchHHHHHHHHHH-ccC-
Confidence 477776653 444444 47999999985421 11111 1233 4666322111 0 1355666665554 334
Q ss_pred cchHHHHHHHHHHHHHhc
Q 036520 433 EEGEKLRVRAREAANTFN 450 (473)
Q Consensus 433 ~~~~~~~~~a~~~~~~~~ 450 (473)
+++++++.+..++.+.
T Consensus 155 --d~~l~~kL~~~r~~~~ 170 (182)
T 1u11_A 155 --NPALAARLETWRALQT 170 (182)
T ss_dssp --CHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHH
Confidence 6899999999888775
No 119
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=48.61 E-value=56 Score=27.92 Aligned_cols=44 Identities=18% Similarity=0.195 Sum_probs=29.6
Q ss_pred EEecccch-HHHhhCCCcceeeeccCchhHHHHHh---------hCCceecccc
Q 036520 346 VSIGWAPQ-LEILAHPSIGTSLFHAGWGSVIETLQ---------FGHSLVVLPL 389 (473)
Q Consensus 346 ~~~~~~pq-~~ll~~~~~~~~ItHGG~~s~~eal~---------~GvP~l~~P~ 389 (473)
.+....++ ..++..-+-.+++--||.||+-|... +++|++.+-.
T Consensus 94 ~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 94 RAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 34455565 44444444457888899999988762 4899988764
No 120
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=48.31 E-value=26 Score=30.29 Aligned_cols=39 Identities=21% Similarity=0.223 Sum_probs=34.6
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
+++|++.--|+.|=..-++.+|..|+++|++|.++..+.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 578899999999999999999999999999998877543
No 121
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=48.23 E-value=55 Score=28.00 Aligned_cols=32 Identities=22% Similarity=0.240 Sum_probs=24.0
Q ss_pred CCcE-EEEcCCc-chHHHHHHHcCCCeEEEecch
Q 036520 116 SVDW-IIVDVMS-HWAGKIAQEYHVPLLLFSAFS 147 (473)
Q Consensus 116 ~pD~-vI~D~~~-~~~~~~A~~lgiP~v~~~~~~ 147 (473)
.||+ +|.|+.. .-++.=|.++|||.|.+.-+.
T Consensus 149 ~Pdllvv~Dp~~e~~ai~Ea~~l~IP~IalvDTn 182 (218)
T 3r8n_B 149 LPDALFVIDADHEHIAIKEANNLGIPVFAIVDTN 182 (218)
T ss_dssp CCCSCEEEETGGGHHHHHHHHHHTCCCEEECCSS
T ss_pred CCCeEEecCcccccHHHHHHHHhCCCEEEEEeCc
Confidence 6885 6788754 456667999999999886543
No 122
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=48.17 E-value=15 Score=29.30 Aligned_cols=32 Identities=22% Similarity=0.300 Sum_probs=25.0
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
.||+++ +.|++- ..+++.|.++||+|+++...
T Consensus 4 ~~vlI~---G~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVC---GHSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SCEEEE---CCSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CcEEEE---CCCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 478877 246555 67899999999999999864
No 123
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=47.84 E-value=1.3e+02 Score=27.33 Aligned_cols=99 Identities=14% Similarity=0.024 Sum_probs=0.0
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEG 82 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~ 82 (473)
.+|||+|+-.+..+- +.-++|.++||+|..+.+......-+. ..+...
T Consensus 1 ~~mrivf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~pd~~~grg---------------------------~~l~~~ 48 (314)
T 3tqq_A 1 MSLKIVFAGTPQFAV-----PTLRALIDSSHRVLAVYTQPDRPSGRG---------------------------QKIMES 48 (314)
T ss_dssp CCCEEEEEECSGGGH-----HHHHHHHHSSSEEEEEECCCC-------------------------------------CC
T ss_pred CCcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEeCCCCccccC---------------------------CccCCC
Q ss_pred CccCCCCChhhHHHHHHHHhhh-----------hhHHHHHHHhCCCcEEEEcCCc-chHHHHHHHcCCCeEEEecc
Q 036520 83 AEATVDIPSENIQYLKIAYDLL-----------QHPFKQFVAQQSVDWIIVDVMS-HWAGKIAQEYHVPLLLFSAF 146 (473)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~l~~ll~~~~pD~vI~D~~~-~~~~~~A~~lgiP~v~~~~~ 146 (473)
......... .+++.+.+++.+||++|+=.+. .-...+-+.....++-++++
T Consensus 49 -------------~v~~~A~~~gIpv~~~~~~~~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpS 111 (314)
T 3tqq_A 49 -------------PVKEIARQNEIPIIQPFSLRDEVEQEKLIAMNADVMVVVAYGLILPKKALNAFRLGCVNVHAS 111 (314)
T ss_dssp -------------HHHHHHHHTTCCEECCSCSSSHHHHHHHHTTCCSEEEEESCCSCCCHHHHTSSTTCEEEEESS
T ss_pred -------------HHHHHHHHcCCCEECcccCCCHHHHHHHHhcCCCEEEEcCcccccCHHHHhhCcCCEEEecCc
No 124
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=47.75 E-value=45 Score=26.95 Aligned_cols=136 Identities=13% Similarity=0.086 Sum_probs=75.2
Q ss_pred EEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcce
Q 036520 285 VVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGT 364 (473)
Q Consensus 285 ~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~ 364 (473)
.|-|-+||.. +....+++...|+..|.++-+-+-+. ...|+.+.+..+ =.....+++
T Consensus 5 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa-------HR~p~~~~~~~~--------------~a~~~g~~V 61 (163)
T 3ors_A 5 KVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSA-------HRTPKMMVQFAS--------------EARERGINI 61 (163)
T ss_dssp CEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT-------TTSHHHHHHHHH--------------HTTTTTCCE
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECC-------cCCHHHHHHHHH--------------HHHhCCCcE
Confidence 5666677765 67778888888888888866555442 234443222211 001112334
Q ss_pred eeeccCch----hHHHHHhhCCceeccccccccc-cceee--e--eecce--EEEEec-CCCCCcCHHHHHHHHHHHhcC
Q 036520 365 SLFHAGWG----SVIETLQFGHSLVVLPLIIDQP-LNARL--L--VDKDL--AVQVER-KDDGSFTRDGIAKALRLATVS 432 (473)
Q Consensus 365 ~ItHGG~~----s~~eal~~GvP~l~~P~~~DQ~-~na~~--v--~~~G~--G~~l~~-~~~~~~t~~~l~~~i~~ll~~ 432 (473)
+|.=.|.. ++..++ .-+|+|.+|....-. ..... + .-.|+ +..--- . +-.++..++..|-.+ .
T Consensus 62 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a--~~~nAa~lAa~Il~~-~- 136 (163)
T 3ors_A 62 IIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAA--GAKNAGILAARMLSI-Q- 136 (163)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSTHH--HHHHHHHHHHHHHHT-T-
T ss_pred EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEcCCc--ccHHHHHHHHHHHhC-C-
Confidence 88777753 444443 568999999754311 11101 1 23366 332211 0 134555555555443 3
Q ss_pred cchHHHHHHHHHHHHHhc
Q 036520 433 EEGEKLRVRAREAANTFN 450 (473)
Q Consensus 433 ~~~~~~~~~a~~~~~~~~ 450 (473)
|++++++.+.+++.++
T Consensus 137 --d~~l~~kl~~~r~~~~ 152 (163)
T 3ors_A 137 --NPSLVEKLNQYESSLI 152 (163)
T ss_dssp --CTHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHH
Confidence 5889999999888875
No 125
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=47.60 E-value=16 Score=35.55 Aligned_cols=34 Identities=21% Similarity=0.170 Sum_probs=28.2
Q ss_pred HHHHHHHhCCCcEEEEcCCcchHHHHHHHcCCCeEEE
Q 036520 107 PFKQFVAQQSVDWIIVDVMSHWAGKIAQEYHVPLLLF 143 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~ 143 (473)
.+++++++.+||++|.... +..+|+++|||++.+
T Consensus 366 ~le~~i~~~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARAGQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHHHTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHhcCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 3567788889999999854 567899999999976
No 126
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=47.57 E-value=18 Score=32.58 Aligned_cols=35 Identities=26% Similarity=0.450 Sum_probs=24.0
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
|.++|+|.|+=.+..|. .+++.|.+.||+|+++..
T Consensus 1 M~~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp ---CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 78889999995544443 457888899999987653
No 127
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=47.27 E-value=1.6e+02 Score=26.38 Aligned_cols=104 Identities=13% Similarity=0.073 Sum_probs=58.4
Q ss_pred CCccEEEEecCCCccChHHHHHHHHHHHhC--CCeEEEEeCCCc---cccCCCCCCCcccCCCeEEEEecCCcccccccc
Q 036520 2 ARKLHVVMLPWSAFGHLMPFFQLSIALAKS--GVKVSFISTPKN---IQRLPKPAPESEVAALINFVEFPLPASAALDDK 76 (473)
Q Consensus 2 ~~~~~vl~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~~---~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~ 76 (473)
.+++||+++.++. || .+..|..+.... ..+|..+.+... .+..++ .+|.+..+|
T Consensus 86 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a~~~~A~~--------~gIp~~~~~---------- 144 (287)
T 3nrb_A 86 TDRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPREALSVSLV--------GDIPFHYLP---------- 144 (287)
T ss_dssp TCCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGGGCCCCCC--------TTSCEEECC----------
T ss_pred CCCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHHHHHHHHH--------cCCCEEEEe----------
Confidence 4567998887755 54 344555554433 367776654332 222222 366666664
Q ss_pred CCCCCCCccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCc-chHHHHHHHcCCCeEEEec
Q 036520 77 LLLPEGAEATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMS-HWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 77 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~-~~~~~~A~~lgiP~v~~~~ 145 (473)
... . .-....+++.+.+++.+||+||.=.+. .-...+-+.+.-.++-+++
T Consensus 145 ~~~----------~---------~r~~~~~~~~~~l~~~~~Dlivlagym~il~~~~l~~~~~~~iNiHp 195 (287)
T 3nrb_A 145 VTP----------A---------TKAAQESQIKNIVTQSQADLIVLARYMQILSDDLSAFLSGRCINIHH 195 (287)
T ss_dssp CCG----------G---------GHHHHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHHTTSEEEEES
T ss_pred ccC----------c---------chhhHHHHHHHHHHHhCCCEEEhhhhhhhcCHHHHhhccCCeEEECc
Confidence 100 0 001123467788888999999887554 4455555666666676644
No 128
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=47.27 E-value=15 Score=28.23 Aligned_cols=37 Identities=22% Similarity=0.236 Sum_probs=25.1
Q ss_pred HHHHHHHhCCCcEEEEcCCcc--hHHHHH---HHcCCCeEEE
Q 036520 107 PFKQFVAQQSVDWIIVDVMSH--WAGKIA---QEYHVPLLLF 143 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~--~~~~~A---~~lgiP~v~~ 143 (473)
+-.+++++.+||+||.|...+ -|..++ +..++|.|.+
T Consensus 44 eAl~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 44 EALDIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp HHHHHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred HHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 334567888999999997542 444444 3568887655
No 129
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=47.06 E-value=57 Score=26.67 Aligned_cols=138 Identities=12% Similarity=0.038 Sum_probs=74.2
Q ss_pred EEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcce
Q 036520 285 VVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGT 364 (473)
Q Consensus 285 ~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~ 364 (473)
.|-|-+||.. +....+++...|+..|.++-+.+-+. ...|+.+.+..+ =.....+++
T Consensus 14 ~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~Sa-------HR~p~~~~~~~~--------------~a~~~g~~V 70 (174)
T 3kuu_A 14 KIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSA-------HRTPDRLFSFAE--------------QAEANGLHV 70 (174)
T ss_dssp CEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-------TTCHHHHHHHHH--------------HTTTTTCSE
T ss_pred cEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc-------cCCHHHHHHHHH--------------HHHhCCCcE
Confidence 5666677765 67778888888889988876655443 233443222211 001112334
Q ss_pred eeeccCch----hHHHHHhhCCceeccccccccc-cceee--ee--ecceEEEEecCC-CCCcCHHHHHHHHHHHhcCcc
Q 036520 365 SLFHAGWG----SVIETLQFGHSLVVLPLIIDQP-LNARL--LV--DKDLAVQVERKD-DGSFTRDGIAKALRLATVSEE 434 (473)
Q Consensus 365 ~ItHGG~~----s~~eal~~GvP~l~~P~~~DQ~-~na~~--v~--~~G~G~~l~~~~-~~~~t~~~l~~~i~~ll~~~~ 434 (473)
+|.=.|.. ++..++ .-+|+|.+|...-.. ..... +. -.|+.+..-.-+ .+-.++..++..|-.+ .
T Consensus 71 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa~-~--- 145 (174)
T 3kuu_A 71 IIAGNGGAAHLPGMLAAK-TLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILAL-H--- 145 (174)
T ss_dssp EEEEEESSCCHHHHHHHT-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHHT-T---
T ss_pred EEEECChhhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHcC-C---
Confidence 88777764 333332 458999999853211 11111 11 236532221110 0134455555555433 4
Q ss_pred hHHHHHHHHHHHHHhc
Q 036520 435 GEKLRVRAREAANTFN 450 (473)
Q Consensus 435 ~~~~~~~a~~~~~~~~ 450 (473)
|++++++.+.+++.++
T Consensus 146 d~~l~~kl~~~r~~~~ 161 (174)
T 3kuu_A 146 DTELAGRLAHWRQSQT 161 (174)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 6899999999888775
No 130
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=47.04 E-value=9 Score=36.17 Aligned_cols=36 Identities=14% Similarity=0.062 Sum_probs=29.5
Q ss_pred cEEEEecC-CCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 5 LHVVMLPW-SAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 5 ~~vl~~~~-~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
|+|+++.. ++.|-..-...+|..|+++|++|.++..
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 45766655 4568888899999999999999999887
No 131
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=46.68 E-value=32 Score=25.64 Aligned_cols=40 Identities=13% Similarity=0.248 Sum_probs=26.5
Q ss_pred HHHHHHhCCCcEEEEcCCcc--hHHHHHHHc-------CCCeEEEecch
Q 036520 108 FKQFVAQQSVDWIIVDVMSH--WAGKIAQEY-------HVPLLLFSAFS 147 (473)
Q Consensus 108 l~~ll~~~~pD~vI~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 147 (473)
..+.+++.+||+||.|.... .|..+.+.+ ++|.+.++...
T Consensus 38 al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 38 ALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 34556778999999997542 455555433 57888776543
No 132
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=46.67 E-value=13 Score=34.47 Aligned_cols=35 Identities=20% Similarity=0.115 Sum_probs=24.6
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
|.++|||+|+=.|..| ..+|..|+++||+|+++..
T Consensus 1 mm~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 1 MIESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 5567899998554444 3468889999999998864
No 133
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=46.07 E-value=70 Score=26.03 Aligned_cols=140 Identities=11% Similarity=0.081 Sum_probs=76.1
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcc
Q 036520 284 SVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIG 363 (473)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~ 363 (473)
+.|-|-+||.. +....+++...|+..|.++-+.+-+. ...|+.+.+..+ . .....++
T Consensus 7 ~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa-------HR~p~~~~~~~~-----------~---a~~~g~~ 63 (169)
T 3trh_A 7 IFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSA-------HRTPKETVEFVE-----------N---ADNRGCA 63 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT-------TTSHHHHHHHHH-----------H---HHHTTEE
T ss_pred CcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcc-------cCCHHHHHHHHH-----------H---HHhCCCc
Confidence 46777778765 67778888888889888876655443 234443222211 0 0112233
Q ss_pred eeeeccCchhHHHHH---hhCCceeccccccccc-cceee--ee--ecceEEEEe-cCCCCCcCHHHHHHHHHHHhcCcc
Q 036520 364 TSLFHAGWGSVIETL---QFGHSLVVLPLIIDQP-LNARL--LV--DKDLAVQVE-RKDDGSFTRDGIAKALRLATVSEE 434 (473)
Q Consensus 364 ~~ItHGG~~s~~eal---~~GvP~l~~P~~~DQ~-~na~~--v~--~~G~G~~l~-~~~~~~~t~~~l~~~i~~ll~~~~ 434 (473)
+||.=.|...-+-++ ..-+|+|.+|...-.. ..... +. -.|+.+..- ..+.+..++..++..|-.+ .
T Consensus 64 ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~-~--- 139 (169)
T 3trh_A 64 VFIAAAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQIIAL-Q--- 139 (169)
T ss_dssp EEEEEECSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHHHT-T---
T ss_pred EEEEECChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHHcC-C---
Confidence 488877764333222 2458999999853211 11111 12 246542221 1100134555555555433 4
Q ss_pred hHHHHHHHHHHHHHhc
Q 036520 435 GEKLRVRAREAANTFN 450 (473)
Q Consensus 435 ~~~~~~~a~~~~~~~~ 450 (473)
|+.++++.+..++.++
T Consensus 140 d~~l~~kl~~~r~~~~ 155 (169)
T 3trh_A 140 DKSIAQKLVQQRTAKR 155 (169)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 6899999999988876
No 134
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=45.98 E-value=29 Score=27.05 Aligned_cols=39 Identities=15% Similarity=0.315 Sum_probs=27.0
Q ss_pred HHHHHhCCCcEEEEcCCc--chHHHHHHHc-------CCCeEEEecch
Q 036520 109 KQFVAQQSVDWIIVDVMS--HWAGKIAQEY-------HVPLLLFSAFS 147 (473)
Q Consensus 109 ~~ll~~~~pD~vI~D~~~--~~~~~~A~~l-------giP~v~~~~~~ 147 (473)
.+++++.+||+||.|... .-|..+++.+ ++|.+.++...
T Consensus 50 l~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 50 LPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 455677799999999755 3566666543 58888776544
No 135
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=45.53 E-value=27 Score=36.22 Aligned_cols=110 Identities=10% Similarity=0.045 Sum_probs=73.9
Q ss_pred EecccchHHHhhCCCcceeeeccCchhHHHHHhhCCceeccccccccccceeeeeecceEEEEecCC--CC--CcCHHHH
Q 036520 347 SIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKD--DG--SFTRDGI 422 (473)
Q Consensus 347 ~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~--~~--~~t~~~l 422 (473)
+..+.+-.++|..+++ +||-- .+.+.|.+..++|+|....-.|++..- ..|+ ..+..+ .| .-|.++|
T Consensus 603 ~~~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~rg~--y~d~~~~~pg~~~~~~~eL 673 (729)
T 3l7i_A 603 VSNYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----LRGF--YMNYMEDLPGPIYTEPYGL 673 (729)
T ss_dssp CTTCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----CCSB--SSCTTSSSSSCEESSHHHH
T ss_pred CCCCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----cCCc--ccChhHhCCCCeECCHHHH
Confidence 3345566889988998 99995 567899999999999988777776542 1122 222210 01 3478899
Q ss_pred HHHHHHHhcCcchHHHHHHHHHHHHHhc---cCCCcHHHHHHHHHHHH
Q 036520 423 AKALRLATVSEEGEKLRVRAREAANTFN---DKKLHDDYSVRFVEYLK 467 (473)
Q Consensus 423 ~~~i~~ll~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~~~~~~ 467 (473)
.++|.+...+ +..++++.+++.+.+- ++..+++.++.+.+...
T Consensus 674 ~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 674 AKELKNLDKV--QQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHHTTHHHH--HHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHHHHH
T ss_pred HHHHhhhhcc--chhHHHHHHHHHHHhCCccCChHHHHHHHHHHhcCc
Confidence 9999888752 4578888888888864 33344555566655444
No 136
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=44.86 E-value=1.5e+02 Score=25.67 Aligned_cols=38 Identities=8% Similarity=0.051 Sum_probs=26.7
Q ss_pred ccEEEEecCCCccCh-HHHHHHHHHHHhCCCeEEEEeCC
Q 036520 4 KLHVVMLPWSAFGHL-MPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~-~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
.|||+++-.-+.-++ ..+...++.++.-|.+|.+++.+
T Consensus 1 ~mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 1 SVRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 378988777766555 46666788776667787777743
No 137
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=44.69 E-value=44 Score=28.55 Aligned_cols=41 Identities=5% Similarity=0.152 Sum_probs=28.1
Q ss_pred hhHHHHHHHhCCCcEEEEcCCc-chHHHHHHHcCCCeEEEec
Q 036520 105 QHPFKQFVAQQSVDWIIVDVMS-HWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 105 ~~~l~~ll~~~~pD~vI~D~~~-~~~~~~A~~lgiP~v~~~~ 145 (473)
.+++.+.+++.+||+||+=.+. .-...+-+...-.++-+++
T Consensus 72 d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 113 (215)
T 3tqr_A 72 ESTLQKTIDHYDPKLIVLAGFMRKLGKAFVSHYSGRMINIHP 113 (215)
T ss_dssp HHHHHHHHHTTCCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred HHHHHHHHHhcCCCEEEEccchhhCCHHHHhhccCCeEEeCc
Confidence 3467788899999999987653 4444555556656776654
No 138
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=43.75 E-value=57 Score=26.89 Aligned_cols=139 Identities=12% Similarity=0.113 Sum_probs=79.9
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcc
Q 036520 284 SVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIG 363 (473)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~ 363 (473)
|.|-|-+||.. +....+++...|+..|.++-+-+-+. -..|+.+.+..+ + .....++
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa-------HR~p~~l~~~~~-----------~---a~~~g~~ 70 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA-------HRTPDRMFEYAK-----------N---AEERGIE 70 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT-------TTCHHHHHHHHH-----------H---TTTTTCC
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc-------cCCHHHHHHHHH-----------H---HHhCCCc
Confidence 47888888875 77888888888989988866555432 233443222211 0 0011223
Q ss_pred eeeeccCch----hHHHHHhhCCceecccccccc--cccee-eeeec--ceEEEEecCCCCCcCHHHHHHHHHHHhcCcc
Q 036520 364 TSLFHAGWG----SVIETLQFGHSLVVLPLIIDQ--PLNAR-LLVDK--DLAVQVERKDDGSFTRDGIAKALRLATVSEE 434 (473)
Q Consensus 364 ~~ItHGG~~----s~~eal~~GvP~l~~P~~~DQ--~~na~-~v~~~--G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~ 434 (473)
++|.=.|.. ++..++ .-+|+|.+|....- -..+. -+.+. |+.+..-.- ++-.++.-++..|.. +.
T Consensus 71 ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~I-d~~~nAa~lAaqIla-~~--- 144 (183)
T 1o4v_A 71 VIIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAI-NNAKNAGILAASILG-IK--- 144 (183)
T ss_dssp EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCT-TCHHHHHHHHHHHHH-TT---
T ss_pred EEEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEec-CCchHHHHHHHHHHh-cC---
Confidence 477776653 444444 67999999985421 11111 12333 644222111 135677777766653 35
Q ss_pred hHHHHHHHHHHHHHhcc
Q 036520 435 GEKLRVRAREAANTFND 451 (473)
Q Consensus 435 ~~~~~~~a~~~~~~~~~ 451 (473)
+++++++.+..+..+.+
T Consensus 145 d~~l~~kL~~~r~~~~~ 161 (183)
T 1o4v_A 145 YPEIARKVKEYKERMKR 161 (183)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 68999999998888763
No 139
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=43.53 E-value=38 Score=31.51 Aligned_cols=26 Identities=23% Similarity=0.259 Sum_probs=20.8
Q ss_pred CCCcceeeeccCchhH---HHHHhhCCceec
Q 036520 359 HPSIGTSLFHAGWGSV---IETLQFGHSLVV 386 (473)
Q Consensus 359 ~~~~~~~ItHGG~~s~---~eal~~GvP~l~ 386 (473)
+|++ +|++||.-+. ..|-..|+|+++
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 6777 9999998764 556778999985
No 140
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=43.45 E-value=23 Score=31.94 Aligned_cols=37 Identities=19% Similarity=0.223 Sum_probs=25.8
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|+.+|+|++. |+.|.+- ..++++|.++||+|+.++-.
T Consensus 1 M~~~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 1 MDKKSRVLIV--GGTGYIG--KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp -CCCCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCS
T ss_pred CCCCCEEEEE--cCCcHHH--HHHHHHHHhCCCcEEEEECC
Confidence 6655666654 4556664 45788999999999988754
No 141
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=43.24 E-value=1.6e+02 Score=26.30 Aligned_cols=104 Identities=11% Similarity=0.116 Sum_probs=57.7
Q ss_pred CCccEEEEecCCCccChHHHHHHHHHHHhC--CCeEEEEeCCC---ccccCCCCCCCcccCCCeEEEEecCCcccccccc
Q 036520 2 ARKLHVVMLPWSAFGHLMPFFQLSIALAKS--GVKVSFISTPK---NIQRLPKPAPESEVAALINFVEFPLPASAALDDK 76 (473)
Q Consensus 2 ~~~~~vl~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~---~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~ 76 (473)
.+++||+++.++. || -+..|..+.... ..+|.++.+.. ..+.+++ .+|.+..+|
T Consensus 87 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~--------~gIp~~~~~---------- 145 (288)
T 3obi_A 87 ETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDF--------GDIPFYHFP---------- 145 (288)
T ss_dssp TSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTT--------TTCCEEECC----------
T ss_pred CCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHH--------cCCCEEEeC----------
Confidence 4567898887755 55 334444444332 24777665433 2222222 367777665
Q ss_pred CCCCCCCccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCc-chHHHHHHHcCCCeEEEec
Q 036520 77 LLLPEGAEATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMS-HWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 77 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~-~~~~~~A~~lgiP~v~~~~ 145 (473)
... . . -....+++.+.+++.+||+||.=.+. .-...+-+.+.-.++-+++
T Consensus 146 ~~~----------~-~--------r~~~~~~~~~~l~~~~~Dlivlagy~~il~~~~l~~~~~~~iNiHp 196 (288)
T 3obi_A 146 VNK----------D-T--------RRQQEAAITALIAQTHTDLVVLARYMQILSDEMSARLAGRCINIHH 196 (288)
T ss_dssp CCT----------T-T--------HHHHHHHHHHHHHHHTCCEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred CCc----------c-c--------HHHHHHHHHHHHHhcCCCEEEhhhhhhhCCHHHHhhhcCCeEEeCc
Confidence 110 0 0 01123466788888999999887544 4455555666656676644
No 142
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=43.20 E-value=1.2e+02 Score=24.45 Aligned_cols=135 Identities=10% Similarity=0.087 Sum_probs=76.5
Q ss_pred EEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCC-Ccc
Q 036520 285 VVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHP-SIG 363 (473)
Q Consensus 285 ~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~-~~~ 363 (473)
.|-|-+||.. +....+++...|+..|.++-+.+-+. ...|+.+.+.. .. .... .++
T Consensus 4 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~sa-------HR~p~~~~~~~-----------~~---a~~~~~~~ 60 (159)
T 3rg8_A 4 LVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSA-------HKTAEHVVSML-----------KE---YEALDRPK 60 (159)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT-------TTCHHHHHHHH-----------HH---HHTSCSCE
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc-------cCCHHHHHHHH-----------HH---hhhcCCCc
Confidence 5666678765 67778888888888888766555442 23444322221 10 0111 234
Q ss_pred eeeeccCch----hHHHHHhhCCceeccccccc---cc-cceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcch
Q 036520 364 TSLFHAGWG----SVIETLQFGHSLVVLPLIID---QP-LNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEG 435 (473)
Q Consensus 364 ~~ItHGG~~----s~~eal~~GvP~l~~P~~~D---Q~-~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~ 435 (473)
++|.=.|.. ++..++ .-+|+|.+|...- .. .++..=--.|+.+.-- . +-.++..++..|-.+ . |
T Consensus 61 ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dLlS~vqmp~GvpVatv-~--~~~nAa~lA~~Il~~-~---d 132 (159)
T 3rg8_A 61 LYITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGADIYSSLRMPSGISPALV-L--EPKNAALLAARIFSL-Y---D 132 (159)
T ss_dssp EEEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTHHHHHHCCCTTCCCEEC-C--SHHHHHHHHHHHHTT-T---C
T ss_pred EEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCccHHHHHhCCCCCceEEe-c--CchHHHHHHHHHHhC-C---C
Confidence 488877764 344443 5689999996431 11 1111111226554332 2 356666666555433 3 6
Q ss_pred HHHHHHHHHHHHHhc
Q 036520 436 EKLRVRAREAANTFN 450 (473)
Q Consensus 436 ~~~~~~a~~~~~~~~ 450 (473)
++++++.+..+..+.
T Consensus 133 ~~l~~kl~~~r~~~~ 147 (159)
T 3rg8_A 133 KEIADSVKSYMESNA 147 (159)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 899999998888765
No 143
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=43.16 E-value=87 Score=26.09 Aligned_cols=100 Identities=14% Similarity=0.011 Sum_probs=50.7
Q ss_pred hhhccccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEeccc
Q 036520 272 KIFQWLDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWA 351 (473)
Q Consensus 272 ~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~ 351 (473)
++-++|.++. ...|+-|.- .-.+....++..+.+-+++=++...... ...++.. - ...++.++.
T Consensus 35 ~lg~~la~~g---~~lv~GGG~----~GlM~a~~~ga~~~GG~viGv~p~~l~~----~e~~~~~----~-~~~i~~~~~ 98 (189)
T 3sbx_A 35 AVGAAIAARG---WTLVWGGGH----VSAMGAVSSAARAHGGWTVGVIPKMLVH----RELADHD----A-DELVVTETM 98 (189)
T ss_dssp HHHHHHHHTT---CEEEECCBC----SHHHHHHHHHHHTTTCCEEEEEETTTTT----TTTBCTT----C-SEEEEESSH
T ss_pred HHHHHHHHCC---CEEEECCCc----cCHHHHHHHHHHHcCCcEEEEcCchhhh----cccCCCC----C-CeeEEcCCH
Confidence 3445555443 444444321 1344556666666666666555432110 1111100 0 123334554
Q ss_pred ch-HHH-hhCCCcceeeeccCchhHHHHH---------hhCCceeccc
Q 036520 352 PQ-LEI-LAHPSIGTSLFHAGWGSVIETL---------QFGHSLVVLP 388 (473)
Q Consensus 352 pq-~~l-l~~~~~~~~ItHGG~~s~~eal---------~~GvP~l~~P 388 (473)
.. ..+ +.+++ .+++--||.||.-|.. .+++|++.+-
T Consensus 99 ~~Rk~~m~~~sd-a~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln 145 (189)
T 3sbx_A 99 WERKQVMEDRAN-AFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLD 145 (189)
T ss_dssp HHHHHHHHHHCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred HHHHHHHHHHCC-EEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEec
Confidence 43 333 44555 4577788899998874 3688988774
No 144
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=42.62 E-value=1.1e+02 Score=24.65 Aligned_cols=135 Identities=14% Similarity=0.102 Sum_probs=73.3
Q ss_pred EEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCccee
Q 036520 286 VFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTS 365 (473)
Q Consensus 286 V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ 365 (473)
|-|-+||.. +....+++...|+..|.++-+-+-+. ...|+.+.+ +...+.-+++
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~sa-------HR~p~~~~~-----------------~~~~a~~~Vi 55 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVASA-------HRTPELVEE-----------------IVKNSKADVF 55 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-------TTCHHHHHH-----------------HHHHCCCSEE
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc-------cCCHHHHHH-----------------HHHhcCCCEE
Confidence 345566654 67778888888888888865555432 233442222 2221111347
Q ss_pred eeccCchhHHHHH---hhCCceeccccccccccceee--eee--cceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHH
Q 036520 366 LFHAGWGSVIETL---QFGHSLVVLPLIIDQPLNARL--LVD--KDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKL 438 (473)
Q Consensus 366 ItHGG~~s~~eal---~~GvP~l~~P~~~DQ~~na~~--v~~--~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~ 438 (473)
|.=.|...-+-++ ..-+|+|.+|....-...... +.+ .|+.+..-.- ++-.++.-++..|. -+. ++++
T Consensus 56 Ia~AG~aa~Lpgvva~~t~~PVIgVP~~~~l~G~daLlS~vqmP~gvpVatV~I-~~~~nAa~lA~~Il-~~~---d~~l 130 (157)
T 2ywx_A 56 IAIAGLAAHLPGVVASLTTKPVIAVPVDAKLDGLDALLSSVQMPPGIPVATVGI-DRGENAAILALEIL-ALK---DENI 130 (157)
T ss_dssp EEEEESSCCHHHHHHTTCSSCEEEEEECSSGGGHHHHHHHHSCCTTSCCEECCT-TCHHHHHHHHHHHH-TTT---CHHH
T ss_pred EEEcCchhhhHHHHHhccCCCEEEecCCCccCcHHHHHHHhcCCCCCeeEEEec-CCcHHHHHHHHHHH-hcC---CHHH
Confidence 7776654333322 246899999982211011101 222 3644222110 12556666665554 334 6899
Q ss_pred HHHHHHHHHHhcc
Q 036520 439 RVRAREAANTFND 451 (473)
Q Consensus 439 ~~~a~~~~~~~~~ 451 (473)
+++.+..+..+.+
T Consensus 131 ~~kl~~~r~~~~~ 143 (157)
T 2ywx_A 131 AKKLIEYREKMKK 143 (157)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988763
No 145
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=41.93 E-value=32 Score=30.51 Aligned_cols=40 Identities=15% Similarity=0.156 Sum_probs=31.0
Q ss_pred hHHHHHHHhCCCcEEEEcCCcc------hHHHHHHHcCCCeEEEec
Q 036520 106 HPFKQFVAQQSVDWIIVDVMSH------WAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 106 ~~l~~ll~~~~pD~vI~D~~~~------~~~~~A~~lgiP~v~~~~ 145 (473)
..+.+++++.+||+||+-.-+. .+..+|.+||+|.++..+
T Consensus 102 ~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 102 RILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 3455666666899999875442 678899999999998765
No 146
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=41.55 E-value=32 Score=28.50 Aligned_cols=36 Identities=17% Similarity=0.244 Sum_probs=25.6
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|.. |+|++. ++.|.+- ..++++|.++||+|+.+...
T Consensus 1 M~~-~~ilVt--GatG~iG--~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 1 MAV-KKIAIF--GATGQTG--LTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CCC-CEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCC-CEEEEE--cCCcHHH--HHHHHHHHHCCCeEEEEEeC
Confidence 554 576664 4555443 56789999999999988754
No 147
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=41.40 E-value=81 Score=30.25 Aligned_cols=34 Identities=12% Similarity=0.164 Sum_probs=25.0
Q ss_pred CCccEEEEecCCCccChHHHHHHHHHHHhC-CCeEEEEeC
Q 036520 2 ARKLHVVMLPWSAFGHLMPFFQLSIALAKS-GVKVSFIST 40 (473)
Q Consensus 2 ~~~~~vl~~~~~~~gH~~p~l~la~~L~~~-Gh~Vt~~~~ 40 (473)
.++|+|+++-.++ .+..++..|+++ |++++++.+
T Consensus 19 ~~~~~iliiG~g~-----r~~a~a~~~~~~~g~~~v~~~~ 53 (451)
T 2yrx_A 19 QSHMNVLVIGRGG-----REHAIAWKAAQSPLVGKLYVAP 53 (451)
T ss_dssp CSSEEEEEEECSH-----HHHHHHHHHHTCTTEEEEEEEE
T ss_pred CCCCEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEEC
Confidence 4568999987763 467888888775 888777654
No 148
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=41.23 E-value=1.1e+02 Score=25.48 Aligned_cols=96 Identities=13% Similarity=0.090 Sum_probs=54.9
Q ss_pred hhhhccccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEe--
Q 036520 271 SKIFQWLDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSI-- 348 (473)
Q Consensus 271 ~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~-- 348 (473)
.++-++|.+.. ...|+-|.. -.+....++..+.+-++|-+++..... ... ..+.+.
T Consensus 48 ~~lg~~LA~~G---~~vVsGg~~-----GiM~aa~~gAl~~GG~~iGVlP~e~~~----~~~----------~~~~~~~~ 105 (195)
T 1rcu_A 48 LELGRTLAKKG---YLVFNGGRD-----GVMELVSQGVREAGGTVVGILPDEEAG----NPY----------LSVAVKTG 105 (195)
T ss_dssp HHHHHHHHHTT---CEEEECCSS-----HHHHHHHHHHHHTTCCEEEEESTTCCC----CTT----------CSEEEECC
T ss_pred HHHHHHHHHCC---CEEEeCCHH-----HHHHHHHHHHHHcCCcEEEEeCCcccC----CCC----------cceeeecC
Confidence 44556666544 555553433 344555666656666777777642111 100 123332
Q ss_pred cccc-hHHHhhCCCcceeeeccCchhHHHH---HhhCCceeccc
Q 036520 349 GWAP-QLEILAHPSIGTSLFHAGWGSVIET---LQFGHSLVVLP 388 (473)
Q Consensus 349 ~~~p-q~~ll~~~~~~~~ItHGG~~s~~ea---l~~GvP~l~~P 388 (473)
...+ -..++..-+-.+++--||.||+.|+ +.+|+|+++++
T Consensus 106 ~~f~~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln 149 (195)
T 1rcu_A 106 LDFQMRSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLR 149 (195)
T ss_dssp CCHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEET
T ss_pred CCHHHHHHHHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEEC
Confidence 2344 3555544444567888999987665 77999999996
No 149
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=41.00 E-value=1.6e+02 Score=25.02 Aligned_cols=69 Identities=9% Similarity=-0.019 Sum_probs=44.9
Q ss_pred ccCchhHHHHHhhCCceeccccc--cccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHH
Q 036520 368 HAGWGSVIETLQFGHSLVVLPLI--IDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREA 445 (473)
Q Consensus 368 HGG~~s~~eal~~GvP~l~~P~~--~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~ 445 (473)
..|...+..|+.+|....++-++ .+..+....+.+.- +.+.. .-|.++|.+.+.++ + ..-|.+..+.+
T Consensus 119 yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~~--v~I~~----~dt~~~L~~rl~~~-~---~~ll~~~l~~~ 188 (215)
T 3tqr_A 119 YTGLNTHERALAAGETEHGVSVHYVTEDLDAGPLICQAR--LSITP----QDTPETLKTRVHAL-E---HIIYPEVLSWF 188 (215)
T ss_dssp TCSSCHHHHHHHTTCSEEEEEEEECC-CTTCSCEEEEEE--EECCT----TCCHHHHHHHHHHH-H---HHHHHHHHHHH
T ss_pred CCChhHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEEEE--EecCC----CCCHHHHHHHHHHH-H---HHHHHHHHHHH
Confidence 35889999999999999888764 36666666655442 22332 45888888887765 3 24555555554
Q ss_pred H
Q 036520 446 A 446 (473)
Q Consensus 446 ~ 446 (473)
.
T Consensus 189 ~ 189 (215)
T 3tqr_A 189 A 189 (215)
T ss_dssp H
T ss_pred H
Confidence 4
No 150
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=39.86 E-value=1e+02 Score=27.21 Aligned_cols=39 Identities=13% Similarity=0.051 Sum_probs=22.5
Q ss_pred CCCccEEEEecCCCccChH-HH-HHHHHHHHhCCCeEEEEe
Q 036520 1 MARKLHVVMLPWSAFGHLM-PF-FQLSIALAKSGVKVSFIS 39 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~-p~-l~la~~L~~~Gh~Vt~~~ 39 (473)
|+++.+|+++.......+. .+ ..+-+++.++|+++.+..
T Consensus 1 ~s~~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~ 41 (305)
T 3g1w_A 1 MSLNETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRG 41 (305)
T ss_dssp ----CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeC
Confidence 6777788777765554433 33 345566667799988754
No 151
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=39.83 E-value=33 Score=25.59 Aligned_cols=42 Identities=14% Similarity=0.210 Sum_probs=29.3
Q ss_pred EEEEecCC---CccChHHHHHHHHHHHhC-CC-eEEEEeCCCccccC
Q 036520 6 HVVMLPWS---AFGHLMPFFQLSIALAKS-GV-KVSFISTPKNIQRL 47 (473)
Q Consensus 6 ~vl~~~~~---~~gH~~p~l~la~~L~~~-Gh-~Vt~~~~~~~~~~~ 47 (473)
+++++-.. +.......+.+|..+.+. || +|+++-..+.....
T Consensus 3 k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~ 49 (117)
T 1jx7_A 3 KIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAG 49 (117)
T ss_dssp EEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHH
Confidence 45554433 235566789999999999 99 99988766655444
No 152
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=39.82 E-value=16 Score=33.06 Aligned_cols=57 Identities=11% Similarity=0.092 Sum_probs=37.7
Q ss_pred HHhhCCCcceeeeccCchhHHHHHhh----CCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHh
Q 036520 355 EILAHPSIGTSLFHAGWGSVIETLQF----GHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLAT 430 (473)
Q Consensus 355 ~ll~~~~~~~~ItHGG~~s~~eal~~----GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll 430 (473)
.+-..+++ +|+=||-||+++++.. ++|+++++... .|.- . .+.++++.++++.++
T Consensus 59 ~~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~Gt-----------~gfl-----a---~~~~~~~~~al~~i~ 117 (292)
T 2an1_A 59 EIGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINRGN-----------LGFL-----T---DLDPDNALQQLSDVL 117 (292)
T ss_dssp HHHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCSSS-----------CCSS-----C---CBCTTSHHHHHHHHH
T ss_pred hcccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEECCC-----------cccC-----C---cCCHHHHHHHHHHHH
Confidence 34445666 9999999999999743 78999887421 0100 0 123456777888887
Q ss_pred cC
Q 036520 431 VS 432 (473)
Q Consensus 431 ~~ 432 (473)
+|
T Consensus 118 ~g 119 (292)
T 2an1_A 118 EG 119 (292)
T ss_dssp TT
T ss_pred cC
Confidence 74
No 153
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=39.75 E-value=37 Score=29.96 Aligned_cols=40 Identities=13% Similarity=0.148 Sum_probs=30.7
Q ss_pred hHHHHHHHhCCCcEEEEcCCcc------hHHHHHHHcCCCeEEEec
Q 036520 106 HPFKQFVAQQSVDWIIVDVMSH------WAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 106 ~~l~~ll~~~~pD~vI~D~~~~------~~~~~A~~lgiP~v~~~~ 145 (473)
..+.+++++.+||+|++-.-+. .+..+|.+||+|.++...
T Consensus 106 ~~La~~i~~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 106 RVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp HHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 3455666667899999875442 678899999999998765
No 154
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=39.65 E-value=19 Score=31.15 Aligned_cols=38 Identities=11% Similarity=0.011 Sum_probs=31.6
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
|||+|..-|+-|=..-...||..|+++|++|.++-.+.
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 67888666777888889999999999999999886443
No 155
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=39.64 E-value=35 Score=29.15 Aligned_cols=38 Identities=8% Similarity=-0.019 Sum_probs=34.7
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
+.+|++.+.++-.|-....=++..|..+|++|..+...
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 46899999999999999999999999999999998754
No 156
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=39.43 E-value=12 Score=33.07 Aligned_cols=52 Identities=19% Similarity=0.178 Sum_probs=37.7
Q ss_pred CCcceeeeccCchhHHHHHhh---CCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcC
Q 036520 360 PSIGTSLFHAGWGSVIETLQF---GHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVS 432 (473)
Q Consensus 360 ~~~~~~ItHGG~~s~~eal~~---GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~ 432 (473)
+++ +|+=||-||+++++.. ++|+++++... .|.-. .+.++++.++++.+++|
T Consensus 42 ~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G~-----------~Gfl~--------~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 42 ADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAGR-----------LGFLT--------SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CSE--EEEEECHHHHHHHHTTBCTTCEEEEEESSS-----------CCSSC--------CBCGGGHHHHHHHHHTT
T ss_pred CCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECCC-----------CCccC--------cCCHHHHHHHHHHHHcC
Confidence 455 9999999999999876 78888886321 11111 24567888999998884
No 157
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=39.37 E-value=31 Score=27.03 Aligned_cols=47 Identities=13% Similarity=0.215 Sum_probs=29.5
Q ss_pred CCCcc-EEEEe-cCCCccChH--HHHHHHHHHHhCCCeEEEEeCCCccccC
Q 036520 1 MARKL-HVVML-PWSAFGHLM--PFFQLSIALAKSGVKVSFISTPKNIQRL 47 (473)
Q Consensus 1 m~~~~-~vl~~-~~~~~gH~~--p~l~la~~L~~~Gh~Vt~~~~~~~~~~~ 47 (473)
|...| +++++ ..+-+|+.. -.+.+|..+...||+|.++-..+.....
T Consensus 1 ~~~~Mkk~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DGV~~~ 51 (136)
T 2hy5_B 1 MSEVVKKFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDGVYQL 51 (136)
T ss_dssp ----CCEEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGGGGGG
T ss_pred CccchhEEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHH
Confidence 55566 46554 444456544 4688899999999999988766655443
No 158
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=39.34 E-value=20 Score=33.73 Aligned_cols=31 Identities=29% Similarity=0.363 Sum_probs=24.8
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIS 39 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~ 39 (473)
.|||+|+=.+-.| +.+|..|+++||+|+++=
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 4889888555445 778899999999999984
No 159
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=39.23 E-value=51 Score=25.02 Aligned_cols=41 Identities=20% Similarity=0.221 Sum_probs=26.3
Q ss_pred HHHHHHHhCCCcEEEEcCCcc--hHHHHHHH-------cCCCeEEEecch
Q 036520 107 PFKQFVAQQSVDWIIVDVMSH--WAGKIAQE-------YHVPLLLFSAFS 147 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~--~~~~~A~~-------lgiP~v~~~~~~ 147 (473)
+..+.+++.+||+||.|.... .|..+++. -++|.+.++...
T Consensus 39 ~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 39 EALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 334556778999999997542 35544432 267888776543
No 160
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=39.18 E-value=79 Score=27.12 Aligned_cols=37 Identities=11% Similarity=0.037 Sum_probs=30.5
Q ss_pred EEEEecCC-CccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 6 HVVMLPWS-AFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 6 ~vl~~~~~-~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
.+.++..+ +.|=..-++.++..+..+|..|.++.+..
T Consensus 13 ~i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~~ 50 (223)
T 2b8t_A 13 WIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKI 50 (223)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEecc
Confidence 46666665 88999999999999999999999886543
No 161
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=39.02 E-value=1.7e+02 Score=24.81 Aligned_cols=69 Identities=14% Similarity=0.084 Sum_probs=45.5
Q ss_pred ccCchhHHHHHhhCCceeccccc--cccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHH
Q 036520 368 HAGWGSVIETLQFGHSLVVLPLI--IDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREA 445 (473)
Q Consensus 368 HGG~~s~~eal~~GvP~l~~P~~--~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~ 445 (473)
..|...+..|+.+|....++-++ .+..+....+.+.- +.+.. .-|.++|.+.+.++ + ..-|.+..+.+
T Consensus 118 yrG~~pi~~Ai~~G~~~tGvTvh~v~~~lD~G~Ii~Q~~--v~I~~----~dt~~~L~~rl~~~-e---~~ll~~~l~~~ 187 (215)
T 3kcq_A 118 FKGLNAQEQAYKAGVKIAGCTLHYVYQELDAGPIIMQAA--VPVLR----EDTAESLASRILAA-E---HVCYPKGVKLI 187 (215)
T ss_dssp TCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEE--EECCT----TCCHHHHHHHHHHH-H---HHHHHHHHHHH
T ss_pred CCCccHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEEEE--eecCC----CCCHHHHHHHHHHH-H---HHHHHHHHHHH
Confidence 45889999999999999888764 35666666655442 22332 45888888887765 3 24555555554
Q ss_pred H
Q 036520 446 A 446 (473)
Q Consensus 446 ~ 446 (473)
.
T Consensus 188 ~ 188 (215)
T 3kcq_A 188 A 188 (215)
T ss_dssp H
T ss_pred H
Confidence 4
No 162
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=38.94 E-value=25 Score=30.15 Aligned_cols=41 Identities=7% Similarity=-0.001 Sum_probs=26.3
Q ss_pred hhHHHHHHHhCCCcEEEEcCCc-chHHHHHHHcCCCeEEEec
Q 036520 105 QHPFKQFVAQQSVDWIIVDVMS-HWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 105 ~~~l~~ll~~~~pD~vI~D~~~-~~~~~~A~~lgiP~v~~~~ 145 (473)
.+++.+.+++.+||++|.=.+. .-...+-+...-.++-+++
T Consensus 78 d~~~~~~l~~~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHp 119 (215)
T 3da8_A 78 DVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHP 119 (215)
T ss_dssp HHHHHHHHHTTCCSEEEEEECCSCCCHHHHHHHTTTEEEEES
T ss_pred hHHHHHHHHhhCCCEEEEcCchhhCCHHHHhhccCCeEEeCc
Confidence 4567788899999998876443 3344444555555666544
No 163
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=38.89 E-value=47 Score=29.75 Aligned_cols=37 Identities=14% Similarity=0.104 Sum_probs=23.8
Q ss_pred CccEEEEe-cCCCccChHHH--HHHHHHHHhCCCeEEEEe
Q 036520 3 RKLHVVML-PWSAFGHLMPF--FQLSIALAKSGVKVSFIS 39 (473)
Q Consensus 3 ~~~~vl~~-~~~~~gH~~p~--l~la~~L~~~Gh~Vt~~~ 39 (473)
++||||++ ..|-..-++-. -.+.+.|.++||+|++.-
T Consensus 21 ~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 21 QSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp -CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 46898775 44444434432 346778888999999863
No 164
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=38.44 E-value=89 Score=26.28 Aligned_cols=100 Identities=11% Similarity=0.053 Sum_probs=51.4
Q ss_pred hhhccccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEeccc
Q 036520 272 KIFQWLDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWA 351 (473)
Q Consensus 272 ~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~ 351 (473)
++-++|.++. ...|+-|.- .-.+....++..+.+-+++=++...... ...|+. .-...++++..
T Consensus 44 ~lg~~La~~g---~~lV~GGG~----~GlM~a~~~gA~~~GG~viGv~p~~l~~----~e~~~~-----~~~~~i~~~~~ 107 (199)
T 3qua_A 44 EVGSSIAARG---WTLVSGGGN----VSAMGAVAQAARAKGGHTVGVIPKALVH----RELADV-----DAAELIVTDTM 107 (199)
T ss_dssp HHHHHHHHTT---CEEEECCBC----SHHHHHHHHHHHHTTCCEEEEEEGGGTT----TTTBCT-----TSSEEEEESSH
T ss_pred HHHHHHHHCC---CEEEECCCc----cCHHHHHHHHHHHcCCcEEEEeCchhhh----ccccCC-----CCCeeEEcCCH
Confidence 3455565544 444444331 1344556666666666666665432100 111110 00123444554
Q ss_pred ch-HHH-hhCCCcceeeeccCchhHHHHHh---------hCCceeccc
Q 036520 352 PQ-LEI-LAHPSIGTSLFHAGWGSVIETLQ---------FGHSLVVLP 388 (473)
Q Consensus 352 pq-~~l-l~~~~~~~~ItHGG~~s~~eal~---------~GvP~l~~P 388 (473)
.. ..+ ..++++ +++--||.||.-|... +++|++.+-
T Consensus 108 ~~Rk~~m~~~sda-~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln 154 (199)
T 3qua_A 108 RERKREMEHRSDA-FIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLD 154 (199)
T ss_dssp HHHHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred HHHHHHHHHhcCc-cEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEc
Confidence 43 333 344554 5777888999888743 589988774
No 165
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=38.42 E-value=51 Score=28.80 Aligned_cols=40 Identities=20% Similarity=0.283 Sum_probs=27.7
Q ss_pred CCCccEEEEecCCCcc-----------ChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 1 MARKLHVVMLPWSAFG-----------HLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 1 m~~~~~vl~~~~~~~g-----------H~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|+. .||+++.....+ ...=++.....|.+.|++|+++++.
T Consensus 1 m~m-~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 1 MTP-KRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp --C-CEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCC-CEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 553 378887775322 2245777888999999999999964
No 166
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=38.34 E-value=17 Score=32.89 Aligned_cols=35 Identities=9% Similarity=0.129 Sum_probs=24.8
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
|..+|+|.|+=.+..| ..+|+.|+++||+|+++..
T Consensus 12 M~~~~~I~vIG~G~mG-----~~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 12 TTEQLKLGYIGLGNMG-----APMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp ---CCCEEEECCSTTH-----HHHHHHHTTSTTCEEEECS
T ss_pred ccCCCeEEEECcCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 4446789988655555 3678999999999998753
No 167
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=38.05 E-value=35 Score=27.01 Aligned_cols=43 Identities=23% Similarity=0.250 Sum_probs=31.8
Q ss_pred EEEE-ecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCC
Q 036520 6 HVVM-LPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLP 48 (473)
Q Consensus 6 ~vl~-~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~ 48 (473)
+++| +..+..-.+++.+.+|...+..|++|+++.+......+.
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~ 52 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAIT 52 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTB
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHh
Confidence 4544 444456778899999999999999999888766554443
No 168
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=37.98 E-value=35 Score=29.25 Aligned_cols=44 Identities=11% Similarity=0.183 Sum_probs=29.7
Q ss_pred eEEecccch-HHHh-hCCCcceeeeccCchhHHHHH---------hhCCceecccc
Q 036520 345 IVSIGWAPQ-LEIL-AHPSIGTSLFHAGWGSVIETL---------QFGHSLVVLPL 389 (473)
Q Consensus 345 v~~~~~~pq-~~ll-~~~~~~~~ItHGG~~s~~eal---------~~GvP~l~~P~ 389 (473)
+.+.+..+. ..++ ..++ .+++--||.||+-|.. .+++|++.+-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sd-a~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAE-AFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCS-EEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCC-EEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 444455554 3333 4444 4678889999988876 57999998863
No 169
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=37.94 E-value=28 Score=22.14 Aligned_cols=31 Identities=6% Similarity=0.051 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHhccCCCcHHHHHHHHHHH
Q 036520 436 EKLRVRAREAANTFNDKKLHDDYSVRFVEYL 466 (473)
Q Consensus 436 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 466 (473)
.+|+++...++.+++..++++..+..+.+.+
T Consensus 5 aefkqrlaaiktrlqalggseaelaafekei 35 (73)
T 2a3d_A 5 AEFKQRLAAIKTRLQALGGSEAELAAFEKEI 35 (73)
T ss_dssp HHHHHHHHHHHHHHHHCSSGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 3688888899999888888876555555444
No 170
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=37.94 E-value=45 Score=26.28 Aligned_cols=42 Identities=19% Similarity=0.309 Sum_probs=29.1
Q ss_pred ccEEEEe-cCCCccChH--HHHHHHHHHHhCCCeE-EEEeCCCccc
Q 036520 4 KLHVVML-PWSAFGHLM--PFFQLSIALAKSGVKV-SFISTPKNIQ 45 (473)
Q Consensus 4 ~~~vl~~-~~~~~gH~~--p~l~la~~L~~~Gh~V-t~~~~~~~~~ 45 (473)
.|+++|+ ..+-+|+-. -.+.+|.++.+.||+| .++-..+...
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV~ 57 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGVY 57 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGGG
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechHHH
Confidence 4777664 444455544 5688899999999999 7766555443
No 171
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=37.94 E-value=33 Score=28.84 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=23.9
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|||++. |+.|.+- ..++++|.++||+|+.+.-.
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcC
Confidence 565544 4555554 47889999999999988754
No 172
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=37.76 E-value=37 Score=29.86 Aligned_cols=40 Identities=10% Similarity=0.061 Sum_probs=30.4
Q ss_pred hHHHHHHHhCCCcEEEEcCCc------chHHHHHHHcCCCeEEEec
Q 036520 106 HPFKQFVAQQSVDWIIVDVMS------HWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 106 ~~l~~ll~~~~pD~vI~D~~~------~~~~~~A~~lgiP~v~~~~ 145 (473)
..+.+++++.+||+|++-.-+ -.+..+|.+||+|.++...
T Consensus 103 ~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 103 KILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 345556666689999987544 2678899999999998765
No 173
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=37.75 E-value=30 Score=32.51 Aligned_cols=39 Identities=15% Similarity=0.099 Sum_probs=29.0
Q ss_pred CCCccEEEEecCCCcc-C---hHHHHHHHHHH-HhCCCeEEEEeC
Q 036520 1 MARKLHVVMLPWSAFG-H---LMPFFQLSIAL-AKSGVKVSFIST 40 (473)
Q Consensus 1 m~~~~~vl~~~~~~~g-H---~~p~l~la~~L-~~~Gh~Vt~~~~ 40 (473)
|. ||||+++..+..+ | +.....+.++| .++||+|+.+..
T Consensus 1 m~-k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 1 MT-KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp ---CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CC-CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 54 6899999776544 3 34578889999 999999998863
No 174
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=36.87 E-value=1.6e+02 Score=26.30 Aligned_cols=113 Identities=12% Similarity=0.008 Sum_probs=65.7
Q ss_pred HHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCC
Q 036520 303 EIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGH 382 (473)
Q Consensus 303 ~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~Gv 382 (473)
++++.+++.+..+++..+.. .-+|+.+....+.+-+-+ |+++ .=...|.+.+..|+.+|+
T Consensus 156 ~~~~~l~~~~~Dlivlagym-------~il~~~~l~~~~~~~iNi-----------HpSl--LP~~rG~~p~~~Ai~~G~ 215 (287)
T 3nrb_A 156 QIKNIVTQSQADLIVLARYM-------QILSDDLSAFLSGRCINI-----------HHSF--LPGFKGAKPYHQAHTRGV 215 (287)
T ss_dssp HHHHHHHHHTCSEEEESSCC-------SCCCHHHHHHHTTSEEEE-----------ESSC--TTTTCSSCHHHHHHHHTC
T ss_pred HHHHHHHHhCCCEEEhhhhh-------hhcCHHHHhhccCCeEEE-----------Cccc--ccCCCCchHHHHHHHcCC
Confidence 35566666666666665532 335555555444332222 2222 223458999999999999
Q ss_pred ceecccccc--ccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHH
Q 036520 383 SLVVLPLII--DQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREA 445 (473)
Q Consensus 383 P~l~~P~~~--DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~ 445 (473)
...++-.+. +..+..-.+.+.- +.+.. .-|.++|.+.+.++-. .-|.+..+.+
T Consensus 216 k~tG~Tvh~v~~~lD~GpIi~Q~~--v~i~~----~dt~~~L~~r~~~~e~----~~l~~av~~~ 270 (287)
T 3nrb_A 216 KLIGATAHFVTADLDEGPIIAQDV--EHVSH----RDSAEDLVRKGRDIER----RVLSRAVLLF 270 (287)
T ss_dssp SEEEEEEEECCSSSSCCCEEEEEE--EECCT----TCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CeEEEEEEEECCCCcCCCEEEEEE--EecCC----CCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 998888653 5555655555432 22333 4588889888876633 3444444443
No 175
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=36.82 E-value=57 Score=23.99 Aligned_cols=41 Identities=20% Similarity=0.413 Sum_probs=26.3
Q ss_pred HHHHHHHhCCCcEEEEcCCcc--hHHHHHH----HcCCCeEEEecch
Q 036520 107 PFKQFVAQQSVDWIIVDVMSH--WAGKIAQ----EYHVPLLLFSAFS 147 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~--~~~~~A~----~lgiP~v~~~~~~ 147 (473)
+..+.+++.+||+||.|.... .|..+.+ ..++|.+.++...
T Consensus 37 ~al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 37 EAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp HHHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred HHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 344566778999999997543 3444443 3478887775543
No 176
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=36.82 E-value=29 Score=27.89 Aligned_cols=36 Identities=11% Similarity=0.205 Sum_probs=28.3
Q ss_pred EEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCcc
Q 036520 6 HVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNI 44 (473)
Q Consensus 6 ~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~ 44 (473)
++++++.+. | +.|++.+++.|.++|.+|+++ .....
T Consensus 25 ~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 25 KILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTFE 60 (158)
T ss_dssp EEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECBG
T ss_pred eEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 677776654 3 899999999999999999998 55443
No 177
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=36.27 E-value=44 Score=25.77 Aligned_cols=40 Identities=20% Similarity=0.233 Sum_probs=26.1
Q ss_pred HHHHHHHhCCCcEEEEcCCc--chHHHHHHHc---------CCCeEEEecc
Q 036520 107 PFKQFVAQQSVDWIIVDVMS--HWAGKIAQEY---------HVPLLLFSAF 146 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~--~~~~~~A~~l---------giP~v~~~~~ 146 (473)
+..+.+++.+||+||.|... ..|..+++.+ .+|.+.++..
T Consensus 49 ~al~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 49 QVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 34455677899999999754 2455555443 3787777553
No 178
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=35.84 E-value=67 Score=28.07 Aligned_cols=37 Identities=19% Similarity=0.169 Sum_probs=27.8
Q ss_pred cEEEEecCCCc----------c-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 5 LHVVMLPWSAF----------G-HLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 5 ~~vl~~~~~~~----------g-H~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
.||+++..... | +..=++..-..|.++|++|+++++.
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 37888776632 2 2445788889999999999999964
No 179
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=35.59 E-value=45 Score=27.13 Aligned_cols=37 Identities=22% Similarity=0.364 Sum_probs=28.4
Q ss_pred EEEEecCCCc--c-ChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 6 HVVMLPWSAF--G-HLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 6 ~vl~~~~~~~--g-H~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
+|+++|.-+- . =-.+...|++.|.++|.+|.|+..|-
T Consensus 32 ~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 32 SVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp EEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred eEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 6777776433 2 23478899999999999999999754
No 180
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=35.57 E-value=2.4e+02 Score=25.43 Aligned_cols=68 Identities=12% Similarity=0.006 Sum_probs=44.4
Q ss_pred ccCchhHHHHHhhCCceeccccc--cccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHH
Q 036520 368 HAGWGSVIETLQFGHSLVVLPLI--IDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREA 445 (473)
Q Consensus 368 HGG~~s~~eal~~GvP~l~~P~~--~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~ 445 (473)
..|.+.+..|+.+|+...++-.+ .+..+..-.+.+.- +.+.. .-|.++|.+.+.++-. .-|.+..+.+
T Consensus 217 frG~~p~~~Ai~~G~k~tG~TvH~v~~~lD~GpII~Q~~--v~I~~----~dt~~~L~~r~~~~e~----~~l~~av~~~ 286 (302)
T 3o1l_A 217 FVGAKPYHQASLRGVKLIGATCHYVTEELDAGPIIEQDV--VRVSH----RDSIENMVRFGRDVEK----MVLARGLRAH 286 (302)
T ss_dssp SCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEE--EECCT----TCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CCCccHHHHHHHcCCCeEEEEEEEECCCCcCCCeEEEEE--EecCC----CCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 45899999999999999888864 35555655555432 22333 4588889888876532 4444444443
No 181
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=35.02 E-value=50 Score=28.60 Aligned_cols=26 Identities=31% Similarity=0.418 Sum_probs=20.7
Q ss_pred ccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 15 FGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 15 ~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
.|.+ -..+|++|+++|++|+++..+.
T Consensus 28 SG~m--G~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHL--GKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHH--HHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHH--HHHHHHHHHHCCCEEEEEeCCc
Confidence 4543 4568999999999999998765
No 182
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=34.99 E-value=37 Score=30.40 Aligned_cols=37 Identities=14% Similarity=0.213 Sum_probs=24.8
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|+.+++|++. |+.|.+-. .++++|.++||+|+.++-.
T Consensus 1 M~~~~~ilVt--GatG~iG~--~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 1 MGSRSRILLI--GATGYIGR--HVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp -CCCCCEEEE--STTSTTHH--HHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEEE--cCCcHHHH--HHHHHHHhCCCCEEEEECC
Confidence 6544566554 45555543 6789999999999987654
No 183
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=34.97 E-value=2.1e+02 Score=24.28 Aligned_cols=70 Identities=11% Similarity=0.130 Sum_probs=46.6
Q ss_pred ccCchhHHHHHhhCCceeccccc--cccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHH
Q 036520 368 HAGWGSVIETLQFGHSLVVLPLI--IDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREA 445 (473)
Q Consensus 368 HGG~~s~~eal~~GvP~l~~P~~--~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~ 445 (473)
..|.+.+..|+.+|....++-++ .+..+....+.+.-+ .+.. .-|.++|.+.+.++ + ..-|.+..+.+
T Consensus 125 yrG~~pi~~Ai~~G~~~tGvTvh~v~~~lD~G~Ii~Q~~v--~I~~----~dt~~~L~~rl~~~-~---~~ll~~~l~~~ 194 (215)
T 3da8_A 125 FPGTHGVADALAYGVKVTGATVHLVDAGTDTGPILAQQPV--PVLD----GDDEETLHERIKVT-E---RRLLVAAVAAL 194 (215)
T ss_dssp SCSTTHHHHHHHHTCSEEEEEEEECCSSSSCSCEEEEEEE--ECCT----TCCHHHHHHHHHHH-H---HHHHHHHHHHH
T ss_pred CCCchHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEEEEe--ecCC----CCCHHHHHHHHHHH-H---HHHHHHHHHHH
Confidence 35889999999999999888764 366666666554332 2332 45888888887765 3 34566666555
Q ss_pred HH
Q 036520 446 AN 447 (473)
Q Consensus 446 ~~ 447 (473)
.+
T Consensus 195 ~~ 196 (215)
T 3da8_A 195 AT 196 (215)
T ss_dssp HH
T ss_pred Hc
Confidence 43
No 184
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=34.96 E-value=36 Score=27.05 Aligned_cols=45 Identities=16% Similarity=0.148 Sum_probs=32.8
Q ss_pred CccEEEEecC--CCccChHHHHHHHHHHHhCCCeEEEEeCCCccccC
Q 036520 3 RKLHVVMLPW--SAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRL 47 (473)
Q Consensus 3 ~~~~vl~~~~--~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~ 47 (473)
..|+++++-. -...-+--.+=++..|..+||+|+++.++.....+
T Consensus 5 ~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLl 51 (157)
T 1kjn_A 5 STGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLV 51 (157)
T ss_dssp -CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred cceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhe
Confidence 3578766533 24456666888999999999999999988765444
No 185
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=34.64 E-value=34 Score=33.22 Aligned_cols=34 Identities=26% Similarity=0.515 Sum_probs=27.8
Q ss_pred HHHHHHHhCCCcEEEEcCCcchHHHHHHHcCCCeEEE
Q 036520 107 PFKQFVAQQSVDWIIVDVMSHWAGKIAQEYHVPLLLF 143 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~ 143 (473)
++.+++++.+||++|.+.. ...+|+++|||++.+
T Consensus 376 ~l~~~i~~~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 376 DVHQWIKNEGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHHSCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHHhcCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 3567788889999998853 467899999999976
No 186
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=34.58 E-value=57 Score=29.46 Aligned_cols=26 Identities=23% Similarity=0.388 Sum_probs=22.2
Q ss_pred eeeeccCchhHHHHHh------hCCceecccc
Q 036520 364 TSLFHAGWGSVIETLQ------FGHSLVVLPL 389 (473)
Q Consensus 364 ~~ItHGG~~s~~eal~------~GvP~l~~P~ 389 (473)
.+|.-||-||+.|++. .++|+.++|.
T Consensus 66 ~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 66 LIIVFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp EEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEEEEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 4999999999999864 5789999996
No 187
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=34.56 E-value=1.1e+02 Score=27.72 Aligned_cols=104 Identities=13% Similarity=0.151 Sum_probs=58.2
Q ss_pred CCccEEEEecCCCccChHHHHHHHHHHHhC--CCeEEEEeCCC--ccccCCCCCCCcccCCCeEEEEecCCccccccccC
Q 036520 2 ARKLHVVMLPWSAFGHLMPFFQLSIALAKS--GVKVSFISTPK--NIQRLPKPAPESEVAALINFVEFPLPASAALDDKL 77 (473)
Q Consensus 2 ~~~~~vl~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~--~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~ 77 (473)
.+++||+++.++. || .+..|..+.... +.+|..+.+.. ..+.+++ .+|.+..++.
T Consensus 103 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~--------~gIp~~~~~~---------- 161 (302)
T 3o1l_A 103 AQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEW--------HDIPYYHVPV---------- 161 (302)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHT--------TTCCEEECCC----------
T ss_pred CCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHH--------cCCCEEEcCC----------
Confidence 4577998888755 65 355555555432 46888766532 2222222 3666666641
Q ss_pred CCCCCCccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCc-chHHHHHHHcCCCeEEEec
Q 036520 78 LLPEGAEATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMS-HWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 78 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~-~~~~~~A~~lgiP~v~~~~ 145 (473)
.. .. . ....+++.+++++.+||+||.=.+. .-...+-+.+.-.++-+++
T Consensus 162 ~~-------~~-r-----------~~~~~~~~~~l~~~~~DliVlagym~IL~~~~l~~~~~~~INiHp 211 (302)
T 3o1l_A 162 DP-------KD-K-----------EPAFAEVSRLVGHHQADVVVLARYMQILPPQLCREYAHQVINIHH 211 (302)
T ss_dssp CS-------SC-C-----------HHHHHHHHHHHHHTTCSEEEESSCCSCCCTTHHHHTTTCEEEEES
T ss_pred Cc-------CC-H-----------HHHHHHHHHHHHHhCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCc
Confidence 10 00 0 0123467788899999999887543 3344445555555665544
No 188
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=34.43 E-value=77 Score=29.03 Aligned_cols=81 Identities=16% Similarity=0.039 Sum_probs=0.0
Q ss_pred CCcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCC
Q 036520 282 PRSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPS 361 (473)
Q Consensus 282 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~ 361 (473)
.+-.|+++-.+... +....+.+.+.+.+..+.+..... .+.... +-...+...++
T Consensus 30 ~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~------~~~~~~----------------~~~~~~~~~~d 84 (332)
T 2bon_A 30 PASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWE------KGDAAR----------------YVEEARKFGVA 84 (332)
T ss_dssp CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCS------TTHHHH----------------HHHHHHHHTCS
T ss_pred ceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecC------cchHHH----------------HHHHHHhcCCC
Q ss_pred cceeeeccCchhHHHHH--------hhCCceecccc
Q 036520 362 IGTSLFHAGWGSVIETL--------QFGHSLVVLPL 389 (473)
Q Consensus 362 ~~~~ItHGG~~s~~eal--------~~GvP~l~~P~ 389 (473)
+ +|.-||-||+.|++ ..++|+.++|.
T Consensus 85 ~--vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 85 T--VIAGGGDGTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp E--EEEEESHHHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred E--EEEEccchHHHHHHHHHhhcccCCCCeEEEecC
No 189
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=34.43 E-value=68 Score=26.74 Aligned_cols=103 Identities=13% Similarity=0.103 Sum_probs=55.9
Q ss_pred hhhhccccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecc
Q 036520 271 SKIFQWLDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGW 350 (473)
Q Consensus 271 ~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~ 350 (473)
.++-++|.+.. ...|+-|.-. -.+....++..+.+-+++=+++..... ...++. .-.+..+...
T Consensus 23 ~~lg~~La~~g---~~lV~GGg~~----GiM~aa~~gA~~~gG~~iGv~p~~l~~----~e~~~~-----~~~~~~~~~~ 86 (191)
T 1t35_A 23 AELGVYMAEQG---IGLVYGGSRV----GLMGTIADAIMENGGTAIGVMPSGLFS----GEVVHQ-----NLTELIEVNG 86 (191)
T ss_dssp HHHHHHHHHTT---CEEEECCCCS----HHHHHHHHHHHTTTCCEEEEEETTCCH----HHHTTC-----CCSEEEEESH
T ss_pred HHHHHHHHHCC---CEEEECCCcc----cHHHHHHHHHHHcCCeEEEEeCchhcc----cccccC-----CCCccccCCC
Confidence 34555666544 5556554321 234556666666677777666543110 001110 0112334455
Q ss_pred cch-HHHhhCCCcceeeeccCchhHHHH---H------hhCCceecccc
Q 036520 351 APQ-LEILAHPSIGTSLFHAGWGSVIET---L------QFGHSLVVLPL 389 (473)
Q Consensus 351 ~pq-~~ll~~~~~~~~ItHGG~~s~~ea---l------~~GvP~l~~P~ 389 (473)
.+. ..++..-+-.+++--||.||.-|. + .+++|++.+-.
T Consensus 87 ~~~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 87 MHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp HHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred HHHHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 554 444443444578888999998776 4 37899998854
No 190
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=33.64 E-value=32 Score=31.42 Aligned_cols=37 Identities=16% Similarity=0.059 Sum_probs=28.4
Q ss_pred EEEecCCCccChH--------------HHHHHHHHHHhCCCeEEEEeCCCc
Q 036520 7 VVMLPWSAFGHLM--------------PFFQLSIALAKSGVKVSFISTPKN 43 (473)
Q Consensus 7 vl~~~~~~~gH~~--------------p~l~la~~L~~~Gh~Vt~~~~~~~ 43 (473)
|++.+.|+.=.+. .-..+|+++.++|++|||+..+..
T Consensus 40 VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 40 VLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp EEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred EEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 6666666655552 567889999999999999987643
No 191
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=33.31 E-value=50 Score=27.74 Aligned_cols=38 Identities=16% Similarity=0.218 Sum_probs=27.5
Q ss_pred CCccEEEEecCCCccChHHHHH-HHHHHHhCCCeEEEEe
Q 036520 2 ARKLHVVMLPWSAFGHLMPFFQ-LSIALAKSGVKVSFIS 39 (473)
Q Consensus 2 ~~~~~vl~~~~~~~gH~~p~l~-la~~L~~~Gh~Vt~~~ 39 (473)
.+.|||+++-+...|+..-+.. +++.|.+.|++|.++.
T Consensus 4 ~~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~ 42 (211)
T 1ydg_A 4 TAPVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLK 42 (211)
T ss_dssp -CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEe
Confidence 3457898888777888776554 4666666899988765
No 192
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=32.87 E-value=53 Score=30.00 Aligned_cols=69 Identities=10% Similarity=0.119 Sum_probs=38.6
Q ss_pred hhcCCCeEEeeccCCCCCCCCCCCCchhhhhccccCCCCCcEEEEeecCcc---cCCHHHHHHHHHHHhcCCCCEEEEEc
Q 036520 244 KLTGKPVIPVGLLTPEPNSAKGRDHQISKIFQWLDEQKPRSVVFVGFGSEC---KLSKDQVYEIAYGLELSGLPFLWALR 320 (473)
Q Consensus 244 ~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~i~~~~ 320 (473)
...|..+..+|-+.+... +..-+++..+++..+ ++-|.+|+.. ......+..+++.+++.+..+++=.+
T Consensus 105 ~~~p~r~~~~~~l~~~~~-----~~a~~el~~~~~~~g---~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~~ 176 (336)
T 2wm1_A 105 VSYPRRFVGLGTLPMQAP-----ELAVKEMERCVKELG---FPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPW 176 (336)
T ss_dssp HHSTTTEEEEECCCTTSH-----HHHHHHHHHHHHTSC---CSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEEECC
T ss_pred HhccCceeEEEeCCCcCH-----HHHHHHHHHHHHccC---CeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEECCC
Confidence 344555777776654321 012355666665433 3333344432 24556788889999888887666443
No 193
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=32.84 E-value=43 Score=30.49 Aligned_cols=36 Identities=17% Similarity=0.227 Sum_probs=25.7
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
|..+|+|++. |+.|.+- ..++++|.++||+|+.+..
T Consensus 2 M~~~~~vlVT--GatG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 2 MSTKGTILVT--GGAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp CCSSCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CCCCcEEEEe--cCCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 6666776654 3445444 4688999999999998764
No 194
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=32.73 E-value=55 Score=29.23 Aligned_cols=38 Identities=8% Similarity=0.009 Sum_probs=27.6
Q ss_pred ccEEEEecCCCc-cChH---HHHHHHHHHHhCCCeEEEEeCC
Q 036520 4 KLHVVMLPWSAF-GHLM---PFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 4 ~~~vl~~~~~~~-gH~~---p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
+|+|+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 468988876433 2222 4468999999999999988765
No 195
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=32.73 E-value=30 Score=33.96 Aligned_cols=34 Identities=24% Similarity=0.280 Sum_probs=27.7
Q ss_pred HHHHHHHhCCCcEEEEcCCcchHHHHHHHcCCCeEEE
Q 036520 107 PFKQFVAQQSVDWIIVDVMSHWAGKIAQEYHVPLLLF 143 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~ 143 (473)
++.+++++.+||++|... ....+|+++|||++.+
T Consensus 408 el~~~i~~~~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 408 EFEEFVKRIKPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHHHHCCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred HHHHHHHhcCCcEEEeCc---chhHHHHHcCCCEEec
Confidence 466778888999999974 3467899999999964
No 196
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=32.59 E-value=42 Score=33.19 Aligned_cols=34 Identities=21% Similarity=0.371 Sum_probs=25.1
Q ss_pred HHHHHHHhCCCcEEEEcCCcchHHHHHHHc-------CCCeEEE
Q 036520 107 PFKQFVAQQSVDWIIVDVMSHWAGKIAQEY-------HVPLLLF 143 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~~~~~~A~~l-------giP~v~~ 143 (473)
++.+++++.+||++|..... ..+|+++ |||++.+
T Consensus 429 ~l~~~i~~~~pDLlig~s~~---k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 429 HLRSLVFTDKPDFMIGNSYG---KFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp HHHHHHHHTCCSEEEECTTH---HHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHHhcCCCEEEECccH---HHHHHHhhcccccCCCceEEe
Confidence 45566777899999999643 3456666 9999876
No 197
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=32.56 E-value=2.4e+02 Score=24.18 Aligned_cols=114 Identities=11% Similarity=0.064 Sum_probs=67.5
Q ss_pred HHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCC
Q 036520 303 EIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGH 382 (473)
Q Consensus 303 ~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~Gv 382 (473)
++++.++..+..++++.+.. .-+|+.+.+..+.+-+-+ |+++ .=...|...+..|+.+|.
T Consensus 92 ~~~~~l~~~~~Dliv~agy~-------~IL~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai~~G~ 151 (229)
T 3auf_A 92 ALAERLQAYGVDLVCLAGYM-------RLVRGPMLTAFPNRILNI-----------HPSL--LPAFPGLEAQRQALEHGV 151 (229)
T ss_dssp HHHHHHHHTTCSEEEESSCC-------SCCCHHHHHHSTTCEEEE-----------ESSC--TTSSCSSCHHHHHHHHTC
T ss_pred HHHHHHHhcCCCEEEEcChh-------HhCCHHHHhhccCCEEEE-----------ccCc--CcCCCCcCHHHHHHHcCC
Confidence 35666666666776666542 234554444443322222 2222 223458999999999999
Q ss_pred ceeccccc--cccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHH
Q 036520 383 SLVVLPLI--IDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAA 446 (473)
Q Consensus 383 P~l~~P~~--~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~ 446 (473)
...++-++ .+..+....+.+.-+ .+.. .-|.++|.+.+.++ + ..-+.+..+.+.
T Consensus 152 ~~tGvTvh~v~~~~D~G~Ii~Q~~v--~I~~----~dt~~~L~~rl~~~-~---~~ll~~~l~~l~ 207 (229)
T 3auf_A 152 KVAGCTVHFVTAGVDEGPIILQAAV--PVLE----GDTVEDLRRRILAE-E---HRIYPEAIRLFA 207 (229)
T ss_dssp SEEEEEEEECCSSTTCSCEEEEEEE--ECCT----TCCHHHHHHHHHHH-H---HHHHHHHHHHHH
T ss_pred CeEEEEEEEECCCCcCCCEEEEEEE--ecCC----CCCHHHHHHHHHHH-H---HHHHHHHHHHHH
Confidence 99888764 466677766655433 2332 45888888887665 3 244555555553
No 198
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=32.38 E-value=64 Score=26.08 Aligned_cols=49 Identities=12% Similarity=0.118 Sum_probs=36.0
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCccccCCC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPK 49 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~ 49 (473)
|+++--.+++..+..--+++.+-+|..-+..|++|+++.+-.....+++
T Consensus 2 m~~~kl~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~K 50 (160)
T 3pnx_A 2 MENKKMNLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLRD 50 (160)
T ss_dssp CTTCEEEEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGBC
T ss_pred CCCCcEEEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhcc
Confidence 5554334455556677888999999999999999998887666555554
No 199
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=32.38 E-value=47 Score=30.91 Aligned_cols=28 Identities=14% Similarity=0.099 Sum_probs=20.7
Q ss_pred CCCcceeeec-cCchhHHHHHhhCCceeccc
Q 036520 359 HPSIGTSLFH-AGWGSVIETLQFGHSLVVLP 388 (473)
Q Consensus 359 ~~~~~~~ItH-GG~~s~~eal~~GvP~l~~P 388 (473)
++++ +|+| .+......|-..|+|.+.+-
T Consensus 114 ~PD~--Vv~~~~~~~~~~aa~~~giP~v~~~ 142 (391)
T 3tsa_A 114 RPSV--LLVDVCALIGRVLGGLLDLPVVLHR 142 (391)
T ss_dssp CCSE--EEEETTCHHHHHHHHHTTCCEEEEC
T ss_pred CCCE--EEeCcchhHHHHHHHHhCCCEEEEe
Confidence 6777 7766 55566677778999988873
No 200
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=32.20 E-value=29 Score=33.99 Aligned_cols=34 Identities=21% Similarity=0.119 Sum_probs=27.5
Q ss_pred HHHHHHHhCCCcEEEEcCCcchHHHHHHHcCCCeEEE
Q 036520 107 PFKQFVAQQSVDWIIVDVMSHWAGKIAQEYHVPLLLF 143 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~ 143 (473)
++.+++++.+||++|... .+..+|+++|||++.+
T Consensus 392 el~~~i~~~~pDL~ig~~---~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 392 VLLKTVDEYQADILIAGG---RNMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHHTTCSEEECCG---GGHHHHHHTTCCBCCC
T ss_pred HHHHHHHhcCCCEEEECC---chhHHHHHcCCCEEEe
Confidence 566778889999999974 3557899999999854
No 201
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=32.09 E-value=1.8e+02 Score=26.03 Aligned_cols=113 Identities=12% Similarity=0.004 Sum_probs=64.7
Q ss_pred HHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCC
Q 036520 303 EIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGH 382 (473)
Q Consensus 303 ~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~Gv 382 (473)
++++.+++.+..+++..+.. .-+|+.+.+..+.+-+-+ |+++ .=...|.+.+..|+.+|+
T Consensus 157 ~~~~~l~~~~~Dlivlagy~-------~il~~~~l~~~~~~~iNi-----------HpSl--LP~~rG~~p~~~A~~~G~ 216 (288)
T 3obi_A 157 AITALIAQTHTDLVVLARYM-------QILSDEMSARLAGRCINI-----------HHSF--LPGFKGAKPYHQAFDRGV 216 (288)
T ss_dssp HHHHHHHHHTCCEEEESSCC-------SCCCHHHHHHTTTSEEEE-----------EEEC--SSCCCSSCHHHHHHHHTC
T ss_pred HHHHHHHhcCCCEEEhhhhh-------hhCCHHHHhhhcCCeEEe-----------Cccc--ccCCCCchHHHHHHHcCC
Confidence 35566666666666665532 335555544443322222 1221 222458999999999999
Q ss_pred ceeccccc--cccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHH
Q 036520 383 SLVVLPLI--IDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREA 445 (473)
Q Consensus 383 P~l~~P~~--~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~ 445 (473)
...++-.+ .+..+..-.+.+.- +.+.. .-|.++|.+.+.++-. .-|.+..+.+
T Consensus 217 ~~~G~Tvh~v~~~~D~GpIi~Q~~--v~i~~----~dt~~~L~~r~~~~e~----~~l~~av~~~ 271 (288)
T 3obi_A 217 KLIGATAHYVTSALDEGPIIDQDV--ERISH----RDTPADLVRKGRDIER----RVLSRALHYH 271 (288)
T ss_dssp SEEEEEEEECCSSTTCSCEEEEEE--EECCT----TCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CEEEEEEEEECCCCcCCCeEEEEE--EecCC----CCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 99888764 35556665555432 22333 4588889888876633 3444444443
No 202
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=31.73 E-value=54 Score=26.30 Aligned_cols=36 Identities=25% Similarity=0.340 Sum_probs=27.6
Q ss_pred cEEEEecCCCccChHHHHH-HHHHHHhCCCeEEEEeC
Q 036520 5 LHVVMLPWSAFGHLMPFFQ-LSIALAKSGVKVSFIST 40 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~-la~~L~~~Gh~Vt~~~~ 40 (473)
|+|+++-+..+|+..-+.. +++.|.+.|++|.++.-
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~ 37 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDL 37 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEET
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 5788877777899887654 68888888999887754
No 203
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=31.66 E-value=74 Score=24.05 Aligned_cols=40 Identities=15% Similarity=0.277 Sum_probs=25.5
Q ss_pred HHHHHHHhCCCcEEEEcCCcc--hHHHHHHHc-------CCCeEEEecc
Q 036520 107 PFKQFVAQQSVDWIIVDVMSH--WAGKIAQEY-------HVPLLLFSAF 146 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~--~~~~~A~~l-------giP~v~~~~~ 146 (473)
+..+.+++.+||+||.|.... .+..+.+.+ .+|.+.++..
T Consensus 38 ~al~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 38 ECLEALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 344556777899999997442 355444332 5788877553
No 204
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=31.57 E-value=66 Score=24.25 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=26.8
Q ss_pred HHHHHHHhCCCcEEEEcCCc---chHHHHHHH----cCCCeEEEecchh
Q 036520 107 PFKQFVAQQSVDWIIVDVMS---HWAGKIAQE----YHVPLLLFSAFSA 148 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~---~~~~~~A~~----lgiP~v~~~~~~~ 148 (473)
+..+.+++.+||+||.|... ..+..+++. .++|.+.+.....
T Consensus 45 ~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~ 93 (140)
T 3cg0_A 45 EAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQD 93 (140)
T ss_dssp HHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred HHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCC
Confidence 34455666789999999643 234444433 4789888766443
No 205
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=31.42 E-value=2.4e+02 Score=23.82 Aligned_cols=69 Identities=12% Similarity=0.032 Sum_probs=46.0
Q ss_pred ccCchhHHHHHhhCCceeccccc--cccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHH
Q 036520 368 HAGWGSVIETLQFGHSLVVLPLI--IDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREA 445 (473)
Q Consensus 368 HGG~~s~~eal~~GvP~l~~P~~--~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~ 445 (473)
..|...+..|+.+|....++-++ .+..+....+.+.-+ .+.. .-|.++|.+.+.++ + ..-+.+..+.+
T Consensus 115 yrG~~pi~~ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v--~I~~----~dt~~~L~~rl~~~-~---~~ll~~~l~~~ 184 (212)
T 1jkx_A 115 YPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKV--PVFA----GDSEDDITARVQTQ-E---HAIYPLVISWF 184 (212)
T ss_dssp CCSSCHHHHHHHTTCSEEEEEEEECCSSTTCSCEEEEEEE--ECCT----TCCHHHHHHHHHHH-H---HHHHHHHHHHH
T ss_pred CCCccHHHHHHHcCCCceEEEEEEEcccccCCCEEEEEEE--EcCC----CCCHHHHHHHHHHH-H---HHHHHHHHHHH
Confidence 35889999999999999888764 366666666655433 2332 45888888877665 3 24555555555
Q ss_pred H
Q 036520 446 A 446 (473)
Q Consensus 446 ~ 446 (473)
.
T Consensus 185 ~ 185 (212)
T 1jkx_A 185 A 185 (212)
T ss_dssp H
T ss_pred H
Confidence 3
No 206
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=31.20 E-value=76 Score=23.43 Aligned_cols=41 Identities=10% Similarity=0.255 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCcEEEEcCCcc--hHHHHHHH-----cCCCeEEEecch
Q 036520 107 PFKQFVAQQSVDWIIVDVMSH--WAGKIAQE-----YHVPLLLFSAFS 147 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~--~~~~~A~~-----lgiP~v~~~~~~ 147 (473)
+..+.+++.+||+||.|.... .+..+.+. -++|.+.++...
T Consensus 38 ~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 38 AFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp HHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred HHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 344556777899999996442 44444433 367888776543
No 207
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=31.04 E-value=31 Score=34.14 Aligned_cols=34 Identities=12% Similarity=0.217 Sum_probs=26.9
Q ss_pred HHHHHHHhCCCcEEEEcCCcchHHHHHHHcCCCeEEE
Q 036520 107 PFKQFVAQQSVDWIIVDVMSHWAGKIAQEYHVPLLLF 143 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~ 143 (473)
++.+++++.+||++|.+. ....+|+++|||++.+
T Consensus 340 el~~~i~~~~pDL~ig~~---~~~~~a~~~giP~~~i 373 (525)
T 3aek_B 340 EVEKAIEAAAPELILGTQ---MERNIAKKLGLPCAVI 373 (525)
T ss_dssp HHHHHHHHHCCSEEEECH---HHHHHHHHHTCCEEEC
T ss_pred HHHHHHhhcCCCEEEecc---hhHHHHHHcCCCEEEe
Confidence 355667777999999884 4567889999999975
No 208
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=31.03 E-value=1e+02 Score=25.48 Aligned_cols=41 Identities=17% Similarity=0.118 Sum_probs=30.3
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
|.+.+||+|+.+.+.. ..-+..+.+.|.+.|++|++++...
T Consensus 20 ~~~~~kV~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 20 AGLSKKIAVLITDEFE-DSEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp TTCCCEEEEECCTTBC-THHHHHHHHHHHHTTCEEEEEESST
T ss_pred hccCCEEEEEECCCCC-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3445689998887654 3345667778888999999998654
No 209
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=30.89 E-value=2.4e+02 Score=23.73 Aligned_cols=70 Identities=13% Similarity=0.167 Sum_probs=44.4
Q ss_pred ccCchhHHHHHhhCCceeccccc--cccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHH
Q 036520 368 HAGWGSVIETLQFGHSLVVLPLI--IDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREA 445 (473)
Q Consensus 368 HGG~~s~~eal~~GvP~l~~P~~--~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~ 445 (473)
..|.+.+..|+.+|....++-++ .+..+....+.+.-+ .+.. .-|.++|.+.+.++ + ..-+.+..+.+
T Consensus 115 yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v--~I~~----~dt~~~L~~rl~~~-~---~~ll~~~l~~~ 184 (209)
T 1meo_A 115 FKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAV--PVKR----GDTVATLSERVKLA-E---HKIFPAALQLV 184 (209)
T ss_dssp SCSSCHHHHHHHHTCSEEEEEEEECCC---CCCEEEEEEE--ECCT----TCCHHHHHHHHHHH-H---HHHHHHHHHHH
T ss_pred CCCccHHHHHHHcCCCcEEEEEEEECCCCcCCCEEEEEEE--ecCC----CCCHHHHHHHHHHH-H---HHHHHHHHHHH
Confidence 45889999999999999888764 466666666654332 2332 45888888887665 2 24555655555
Q ss_pred HH
Q 036520 446 AN 447 (473)
Q Consensus 446 ~~ 447 (473)
.+
T Consensus 185 ~~ 186 (209)
T 1meo_A 185 AS 186 (209)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 210
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=30.89 E-value=31 Score=33.98 Aligned_cols=35 Identities=9% Similarity=0.097 Sum_probs=26.8
Q ss_pred HHHHHHHhCCCcEEEEcCCcchHHHHHHHcCCCeEEEe
Q 036520 107 PFKQFVAQQSVDWIIVDVMSHWAGKIAQEYHVPLLLFS 144 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~ 144 (473)
++.+++++.+||++|.+. ....+|+++|||++.+.
T Consensus 363 el~~~i~~~~pDl~ig~~---~~r~~a~k~gip~~~i~ 397 (511)
T 2xdq_B 363 VVGDAIARVEPAAIFGTQ---MERHVGKRLNIPCGVIA 397 (511)
T ss_dssp HHHHHHHHHCCSEEEECH---HHHHHHHHHTCCEEECS
T ss_pred HHHHHHHhcCCCEEEecc---chHHHHHhcCCCeEecc
Confidence 455667777999999874 35567899999999763
No 211
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=30.87 E-value=69 Score=26.80 Aligned_cols=122 Identities=7% Similarity=-0.053 Sum_probs=64.7
Q ss_pred cChHHHHHHHHHHHhCCCeEEEEeCCCccccCCCCCCCcccCCCeEEEEecCCccccccccCCCCCCCc-----cCCCCC
Q 036520 16 GHLMPFFQLSIALAKSGVKVSFISTPKNIQRLPKPAPESEVAALINFVEFPLPASAALDDKLLLPEGAE-----ATVDIP 90 (473)
Q Consensus 16 gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~l~~~~~-----~~~~~~ 90 (473)
|.+.-.+.+|+++ ..|.+|.+.- ......+++. -++.++.++....++..-+........ .+.+..
T Consensus 36 ~~l~~~v~~a~~~-~~~~dVIISR-Ggta~~lr~~-------~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~~~~ 106 (196)
T 2q5c_A 36 ASLTRASKIAFGL-QDEVDAIISR-GATSDYIKKS-------VSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYKHSI 106 (196)
T ss_dssp CCHHHHHHHHHHH-TTTCSEEEEE-HHHHHHHHTT-------CSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEESSCS
T ss_pred CCHHHHHHHHHHh-cCCCeEEEEC-ChHHHHHHHh-------CCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcchh
Confidence 5566677777777 6777755443 3334444442 257777777655432211111000000 011111
Q ss_pred hhhHHHHHHHHh-----------hhhhHHHHHHHhCCCcEEEEcCCcchHHHHHHHcCCCeEEEecchhHH
Q 036520 91 SENIQYLKIAYD-----------LLQHPFKQFVAQQSVDWIIVDVMSHWAGKIAQEYHVPLLLFSAFSAAA 150 (473)
Q Consensus 91 ~~~~~~~~~~~~-----------~~~~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 150 (473)
. ....+...+. .-.+...+-+++.+.|+||.|. .+..+|+++|+|.+.+.++.-..
T Consensus 107 ~-~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~eSI 173 (196)
T 2q5c_A 107 V-DKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVSGK---TVTDEAIKQGLYGETINSGEESL 173 (196)
T ss_dssp S-CHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEECH---HHHHHHHHTTCEEEECCCCHHHH
T ss_pred h-HHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEECCH---HHHHHHHHcCCcEEEEecCHHHH
Confidence 1 1223333332 1123344445667999999985 35789999999999987754443
No 212
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=30.80 E-value=2.4e+02 Score=23.75 Aligned_cols=114 Identities=15% Similarity=0.093 Sum_probs=64.5
Q ss_pred HHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhC
Q 036520 302 YEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFG 381 (473)
Q Consensus 302 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~G 381 (473)
.++++.++..+..++++.+.. .-+|+.+.+..+.+-+-+ |+++ .=...|...+..|+.+|
T Consensus 76 ~~~~~~l~~~~~Dliv~agy~-------~il~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai~~G 135 (209)
T 4ds3_A 76 DAILAALDVLKPDIICLAGYM-------RLLSGRFIAPYEGRILNI-----------HPSL--LPLFPGLHTHQRALDAG 135 (209)
T ss_dssp HHHHHHHHHHCCSEEEESSCC-------SCCCHHHHGGGTTCEEEE-----------ESSC--TTSSCSSCHHHHHHHTT
T ss_pred HHHHHHHHhcCCCEEEEeccc-------cCcCHHHHhhccCCeEEE-----------CCcc--ccCCCChhHHHHHHHcC
Confidence 345666666666777666542 235554444443222222 3333 33446889999999999
Q ss_pred Cceeccccc--cccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHH
Q 036520 382 HSLVVLPLI--IDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREA 445 (473)
Q Consensus 382 vP~l~~P~~--~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~ 445 (473)
....++-++ .+..+....+.+.-+ .+.. .-|.++|.+.+.++ + ..-|.+..+.+
T Consensus 136 ~~~tGvTvh~v~~~~D~G~Ii~Q~~v--~I~~----~dt~~~L~~r~~~~-~---~~ll~~~l~~~ 191 (209)
T 4ds3_A 136 MKLAGCTVHLVTEGMDEGPILAQAAV--PVLD----GDTAETLAARVLKA-E---HRLYPLALQKF 191 (209)
T ss_dssp CSEEEEEEEECCC--CCCCEEEEEEE--ECCT----TCCHHHHHHHHHHH-H---HHHHHHHHHHH
T ss_pred CCeEEEEEEEEcCCCCCCCeEEEEEE--ecCC----CCCHHHHHHHHHHH-H---HHHHHHHHHHH
Confidence 999888764 366666666554422 2322 45788888777654 2 23445544444
No 213
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=30.69 E-value=22 Score=29.66 Aligned_cols=38 Identities=8% Similarity=0.003 Sum_probs=21.4
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHh---CCCeEEEEe
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAK---SGVKVSFIS 39 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~---~Gh~Vt~~~ 39 (473)
|+.+|||+++......+ .-...+++.+++ .|++|.++-
T Consensus 3 m~~~Mkilii~gS~r~~-g~t~~la~~i~~~l~~g~~v~~~d 43 (193)
T 1rtt_A 3 LSDDIKVLGISGSLRSG-SYNSAALQEAIGLVPPGMSIELAD 43 (193)
T ss_dssp ----CEEEEEESCCSTT-CHHHHHHHHHHTTCCTTCEEEECC
T ss_pred CCCCceEEEEECCCCCC-ChHHHHHHHHHHhccCCCeEEEEe
Confidence 56779999888766522 345556666654 367776643
No 214
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=30.55 E-value=47 Score=30.57 Aligned_cols=27 Identities=22% Similarity=0.310 Sum_probs=22.0
Q ss_pred ceeeeccCchhHHHHHh------hCCceecccc
Q 036520 363 GTSLFHAGWGSVIETLQ------FGHSLVVLPL 389 (473)
Q Consensus 363 ~~~ItHGG~~s~~eal~------~GvP~l~~P~ 389 (473)
+++|.=||-||+.|++. .++|+.++|.
T Consensus 82 d~vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 82 DVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp SEEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred CEEEEEcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 34999999999999853 4678999986
No 215
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=30.40 E-value=1e+02 Score=22.10 Aligned_cols=40 Identities=18% Similarity=0.225 Sum_probs=24.7
Q ss_pred HHHHHHHhCCCcEEEEcCCcc--hHHHHHHH-----cCCCeEEEecc
Q 036520 107 PFKQFVAQQSVDWIIVDVMSH--WAGKIAQE-----YHVPLLLFSAF 146 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~--~~~~~A~~-----lgiP~v~~~~~ 146 (473)
+..+.+++.+||+||.|.... .+..+.+. -++|.+.++..
T Consensus 36 ~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 36 EALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp HHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 344556677899999997442 34444432 25777776553
No 216
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=30.40 E-value=93 Score=29.18 Aligned_cols=35 Identities=23% Similarity=0.256 Sum_probs=26.2
Q ss_pred EEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcC
Q 036520 285 VVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRK 321 (473)
Q Consensus 285 ~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 321 (473)
+++++.||.+ .-.-+..++.+|.+.|.++.+..+.
T Consensus 3 Ili~~~gt~G--hv~p~~~La~~L~~~Gh~V~v~~~~ 37 (404)
T 3h4t_A 3 VLITGCGSRG--DTEPLVALAARLRELGADARMCLPP 37 (404)
T ss_dssp EEEEEESSHH--HHHHHHHHHHHHHHTTCCEEEEECG
T ss_pred EEEEeCCCCc--cHHHHHHHHHHHHHCCCeEEEEeCH
Confidence 6778888764 3344566889999999999888764
No 217
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=30.32 E-value=63 Score=25.18 Aligned_cols=38 Identities=21% Similarity=0.273 Sum_probs=27.8
Q ss_pred cEEEEecCCCccChHHHHH-HHHHHHhCCCeEEEEeCCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQ-LSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~-la~~L~~~Gh~Vt~~~~~~ 42 (473)
|+|+++-+..+|+..-+.. +++.|.++|++|.++.-..
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 4677777777888775444 6777878899999886544
No 218
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=30.24 E-value=45 Score=30.60 Aligned_cols=36 Identities=3% Similarity=0.075 Sum_probs=24.6
Q ss_pred HHHHhCCCcEEEEcCCcchHHHHHHHcCCCeEEEec
Q 036520 110 QFVAQQSVDWIIVDVMSHWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 110 ~ll~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~~~ 145 (473)
+.|.+.+||+||..........--++.|||.+.+..
T Consensus 110 E~i~al~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 110 EACVAATPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp HHHHHTCCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred HHHHhcCCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 445667999999875432333445678999998754
No 219
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus}
Probab=29.67 E-value=1.5e+02 Score=27.82 Aligned_cols=31 Identities=19% Similarity=0.158 Sum_probs=23.4
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhC-CCeEEEEeC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKS-GVKVSFIST 40 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~-Gh~Vt~~~~ 40 (473)
|+|+++-.++ ++..+++.|+++ |+++.++.+
T Consensus 1 mkililG~g~-----r~~a~a~~l~~~~g~~~v~~~~ 32 (417)
T 2ip4_A 1 MKVLVVGSGG-----REHALLWKAAQSPRVKRLYAAP 32 (417)
T ss_dssp CEEEEEESSH-----HHHHHHHHHHTCSSCCEEEEEE
T ss_pred CEEEEECCCH-----HHHHHHHHHHhCCCCCEEEEEC
Confidence 6788877763 478899999775 888877753
No 220
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=29.64 E-value=2.1e+02 Score=25.64 Aligned_cols=68 Identities=12% Similarity=0.048 Sum_probs=44.3
Q ss_pred ccCchhHHHHHhhCCceeccccc--cccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHH
Q 036520 368 HAGWGSVIETLQFGHSLVVLPLI--IDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREA 445 (473)
Q Consensus 368 HGG~~s~~eal~~GvP~l~~P~~--~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~ 445 (473)
..|.+.+..|+.+|+...++-.+ .+..+....+.+.- +.+.. .-|.++|.+.+.++-. .-|.+..+.+
T Consensus 207 ~rG~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~G~Ii~Q~~--v~i~~----~dt~~~L~~r~~~~e~----~~l~~av~~~ 276 (292)
T 3lou_A 207 FKGAKPYHQAHARGVKLIGATAHFVTDDLDEGPIIEQVV--ERVDH----SYRPEQLLAVGRDVEC----ITLARAVKAF 276 (292)
T ss_dssp CCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEE--EECCT----TCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CCCccHHHHHHHcCCCeEEEEEEEEcCCCcCCCEEEEEE--EEcCC----CCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 45889999999999999888865 35556666555432 22333 4588888888876532 3444444443
No 221
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=29.47 E-value=52 Score=26.01 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=24.3
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
.++|+++= .|.+- ..+++.|.++|++|+++...
T Consensus 19 ~~~v~IiG---~G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFG---CGRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEEC---CSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEC---CCHHH--HHHHHHHHhCCCeEEEEECC
Confidence 36888873 35554 45788999999999988753
No 222
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=29.47 E-value=2.3e+02 Score=25.26 Aligned_cols=69 Identities=10% Similarity=-0.020 Sum_probs=44.3
Q ss_pred ccCchhHHHHHhhCCceecccccc--ccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHH
Q 036520 368 HAGWGSVIETLQFGHSLVVLPLII--DQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREA 445 (473)
Q Consensus 368 HGG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~ 445 (473)
..|.+.+..|+.+|+...++-.+. +..+..-.+.+.- +.+.. .-|.++|.+.+.++-. .-|.+..+.+
T Consensus 202 ~rG~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~GpIi~Q~~--~~i~~----~dt~~~L~~r~~~~e~----~~l~~av~~~ 271 (286)
T 3n0v_A 202 FKGAKPYHQAYNKGVKMVGATAHYINNDLDEGPIIAQGV--EVVDH----SHYPEDLIAKGRDIEC----LTLARAVGYH 271 (286)
T ss_dssp CCCSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEE--EECCT----TCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CCCccHHHHHHHcCCCeEEEEEEEEcCCCCCCceeEEEE--EEcCC----CCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 358899999999999998888643 5555555555432 22332 4588888888876533 3444444443
Q ss_pred H
Q 036520 446 A 446 (473)
Q Consensus 446 ~ 446 (473)
.
T Consensus 272 ~ 272 (286)
T 3n0v_A 272 I 272 (286)
T ss_dssp H
T ss_pred H
Confidence 3
No 223
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=29.40 E-value=72 Score=29.33 Aligned_cols=30 Identities=3% Similarity=-0.088 Sum_probs=25.1
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEEcCCCCC
Q 036520 296 LSKDQVYEIAYGLELSGLPFLWALRKPEWA 325 (473)
Q Consensus 296 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 325 (473)
.+.++...+-+++.....+.||...++...
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~ 91 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGYNS 91 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSCG
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccccH
Confidence 456788889999999999999999987554
No 224
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=28.92 E-value=77 Score=24.62 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=26.1
Q ss_pred HHHHHHHhCCCcEEEEcCCc--chHHHHHHH-------cCCCeEEEecch
Q 036520 107 PFKQFVAQQSVDWIIVDVMS--HWAGKIAQE-------YHVPLLLFSAFS 147 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~--~~~~~~A~~-------lgiP~v~~~~~~ 147 (473)
+..+.+++.+||+||.|... ..+..+++. -++|.+.+....
T Consensus 42 ~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 42 EAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp HHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 34456677899999999643 234444432 367888776533
No 225
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=28.91 E-value=67 Score=24.12 Aligned_cols=64 Identities=14% Similarity=-0.009 Sum_probs=42.7
Q ss_pred hCCCcceeeeccCchh---------HHHHHhhCCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHH
Q 036520 358 AHPSIGTSLFHAGWGS---------VIETLQFGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRL 428 (473)
Q Consensus 358 ~~~~~~~~ItHGG~~s---------~~eal~~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ 428 (473)
..+++ +|--.|..| +..|...|+|++++=-.+.+. .-..+++.+.. +- ..+.+.|.++|..
T Consensus 37 ~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~a~~--iV-----~Wn~~~I~~aI~~ 106 (111)
T 1eiw_A 37 EDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAVSSE--VV-----GWNPHCIRDALED 106 (111)
T ss_dssp SSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHHCSE--EE-----CSCHHHHHHHHHH
T ss_pred ccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhhCce--ec-----cCCHHHHHHHHHh
Confidence 44666 888888887 677889999999886655441 11223333332 22 4688999999988
Q ss_pred Hhc
Q 036520 429 ATV 431 (473)
Q Consensus 429 ll~ 431 (473)
.+.
T Consensus 107 ~~~ 109 (111)
T 1eiw_A 107 ALD 109 (111)
T ss_dssp HHC
T ss_pred ccC
Confidence 764
No 226
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=28.86 E-value=13 Score=31.26 Aligned_cols=35 Identities=31% Similarity=0.168 Sum_probs=18.8
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHh---CCCeEE
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAK---SGVKVS 36 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~---~Gh~Vt 36 (473)
|.++|||+++....... .-...|++.+.+ .|++|+
T Consensus 1 m~~~mkil~I~GS~r~~-s~t~~l~~~~~~~~~~g~~v~ 38 (193)
T 3svl_A 1 MAEKLQVVTLLGSLRKG-SFNGMVARTLPKIAPASMEVN 38 (193)
T ss_dssp ---CEEEEEEECCCSTT-CHHHHHHHHGGGTSCTTEEEE
T ss_pred CCCCCEEEEEEccCCCC-CHHHHHHHHHHHHccCCCEEE
Confidence 88889999887765522 223456666544 355554
No 227
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=28.81 E-value=88 Score=22.69 Aligned_cols=40 Identities=13% Similarity=0.087 Sum_probs=24.9
Q ss_pred HHHHHHhCCCcEEEEcCCcc--hHHHHHHH-----cCCCeEEEecch
Q 036520 108 FKQFVAQQSVDWIIVDVMSH--WAGKIAQE-----YHVPLLLFSAFS 147 (473)
Q Consensus 108 l~~ll~~~~pD~vI~D~~~~--~~~~~A~~-----lgiP~v~~~~~~ 147 (473)
..+.+++.+||+||.|.... .+..+++. -++|.+.++...
T Consensus 39 a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 39 AVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp HHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred HHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 34455666899999997542 34444433 257877776543
No 228
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=28.79 E-value=56 Score=29.67 Aligned_cols=34 Identities=24% Similarity=0.358 Sum_probs=24.3
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
+|+|++. |+.|.+- ..|++.|.++||+|+.+...
T Consensus 13 ~M~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 13 HVKYAVL--GATGLLG--HHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEECT
T ss_pred CCEEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEecC
Confidence 4676654 4555554 46788999999999988753
No 229
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=28.78 E-value=48 Score=25.88 Aligned_cols=36 Identities=17% Similarity=0.119 Sum_probs=25.5
Q ss_pred cEEEEecCCCccChHHHHH-HHHHHHhCCCeEEEEeC
Q 036520 5 LHVVMLPWSAFGHLMPFFQ-LSIALAKSGVKVSFIST 40 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~-la~~L~~~Gh~Vt~~~~ 40 (473)
||++++-+..+|+..-+.. +++.|.+.|++|.++.-
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~ 37 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDA 37 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEG
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEeh
Confidence 5787777777788765543 46667777999987753
No 230
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=28.69 E-value=89 Score=26.01 Aligned_cols=38 Identities=16% Similarity=0.014 Sum_probs=27.1
Q ss_pred ccEEEEecCCC-c--cChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 4 KLHVVMLPWSA-F--GHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 4 ~~~vl~~~~~~-~--gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
+|+|.+++... . -+..-...|++.|+++|+.|..-..+
T Consensus 13 ~~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 13 RWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CeEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 47898888765 1 22345788899999999987765433
No 231
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=28.66 E-value=59 Score=28.69 Aligned_cols=32 Identities=19% Similarity=0.331 Sum_probs=24.1
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|+|++. |+ |.+- ..|+++|.++||+|+.+...
T Consensus 4 ~~ilVt--Ga-G~iG--~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 4 SKILIA--GC-GDLG--LELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCEEEE--CC-SHHH--HHHHHHHHHTTCCEEEEECT
T ss_pred CcEEEE--CC-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 577766 34 7554 46789999999999998754
No 232
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=28.62 E-value=57 Score=24.35 Aligned_cols=38 Identities=16% Similarity=0.020 Sum_probs=24.7
Q ss_pred CCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 036520 2 ARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIS 39 (473)
Q Consensus 2 ~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~ 39 (473)
.++|||+++|..+.|--.-.-.+-++..++|.+|.+..
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 36799999998876443333344444555798888755
No 233
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=28.62 E-value=77 Score=24.50 Aligned_cols=42 Identities=12% Similarity=0.135 Sum_probs=26.3
Q ss_pred HHHHHHHhCCCcEEEEcCCcc--hHHHHHHH-----cCCCeEEEecchh
Q 036520 107 PFKQFVAQQSVDWIIVDVMSH--WAGKIAQE-----YHVPLLLFSAFSA 148 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~--~~~~~A~~-----lgiP~v~~~~~~~ 148 (473)
...+.+++.+||+||.|.... .+..+.+. -++|.+.+.....
T Consensus 42 ~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 42 DALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYAD 90 (154)
T ss_dssp HHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGG
T ss_pred HHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 345566777899999996432 34444332 2678887765443
No 234
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=28.53 E-value=39 Score=29.27 Aligned_cols=34 Identities=18% Similarity=0.230 Sum_probs=27.8
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
.+|+|.|+=.|..|- .||+.|+++||+|+.+...
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 458999998887774 5889999999999987653
No 235
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=28.44 E-value=46 Score=29.38 Aligned_cols=33 Identities=24% Similarity=0.143 Sum_probs=24.7
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
|+|++. |+ |.+-. .|+++|.++||+|+.++...
T Consensus 6 ~~ilVt--Ga-G~iG~--~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSF--GH-GYTAR--VLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEE--TC-CHHHH--HHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEE--CC-cHHHH--HHHHHHHHCCCEEEEEEcCh
Confidence 577766 35 76654 67899999999999987543
No 236
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=28.40 E-value=1.1e+02 Score=22.38 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=28.7
Q ss_pred EEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCC
Q 036520 285 VVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKP 322 (473)
Q Consensus 285 ~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 322 (473)
.|||-|.| +++.+.+|...+...|.+++..++..
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 57777754 78999999999999999999998754
No 237
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=28.34 E-value=1e+02 Score=26.76 Aligned_cols=36 Identities=8% Similarity=0.144 Sum_probs=25.9
Q ss_pred EEEEecC-----CCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 6 HVVMLPW-----SAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 6 ~vl~~~~-----~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
||+|+.. .+ --..=+......|.+.|++|+++++..
T Consensus 25 kV~ill~~~~~~dG-~e~~E~~~p~~vL~~aG~~V~~~S~~~ 65 (242)
T 3l3b_A 25 NSAVILAGCGHMDG-SEIREAVLVMLELDRHNVNFKCFAPNK 65 (242)
T ss_dssp EEEEECCCSSTTTS-CCHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred EEEEEEecCCCCCC-eeHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 7888776 22 233346666788899999999999654
No 238
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=28.33 E-value=51 Score=29.54 Aligned_cols=37 Identities=5% Similarity=0.134 Sum_probs=28.1
Q ss_pred cEEEEecCCCcc---ChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 5 LHVVMLPWSAFG---HLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 5 ~~vl~~~~~~~g---H~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|||+++..+... .......++++|.++||+|.++...
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 589998887432 1345577999999999999988754
No 239
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=28.25 E-value=90 Score=26.20 Aligned_cols=35 Identities=11% Similarity=0.126 Sum_probs=27.3
Q ss_pred EEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 6 HVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 6 ~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
||+|+.+++.- ..-+......|.+.|++|++++..
T Consensus 11 ~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (208)
T 3ot1_A 11 RILVPVAHGSE-EMETVIIVDTLVRAGFQVTMAAVG 45 (208)
T ss_dssp EEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred eEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcC
Confidence 78888777654 455666678888899999999975
No 240
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=28.23 E-value=41 Score=31.39 Aligned_cols=35 Identities=14% Similarity=0.226 Sum_probs=24.5
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
|.++|+|.|+=.+..| ..+|+.|+++||+|+++..
T Consensus 19 Mm~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred hhcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 5566899988544333 4678999999999998864
No 241
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=28.22 E-value=60 Score=27.63 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=23.5
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|+|++. |+.|.+- ..++++|.++||+|+.+.-.
T Consensus 22 ~~ilVt--GatG~iG--~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 22 MRVLVV--GANGKVA--RYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEE--CCCChHH--HHHHHHHHhCCCeEEEEECC
Confidence 566554 4455554 46789999999999998754
No 242
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=28.21 E-value=33 Score=26.59 Aligned_cols=32 Identities=16% Similarity=0.107 Sum_probs=23.6
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
+||+++=. |.+ -..+++.|.++||+|+++...
T Consensus 7 ~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 46777643 443 357899999999999988753
No 243
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=28.13 E-value=91 Score=22.69 Aligned_cols=41 Identities=22% Similarity=0.322 Sum_probs=25.7
Q ss_pred HHHHHHHhCCCcEEEEcCCcc--hHHHHHHHc----CCCeEEEecch
Q 036520 107 PFKQFVAQQSVDWIIVDVMSH--WAGKIAQEY----HVPLLLFSAFS 147 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~--~~~~~A~~l----giP~v~~~~~~ 147 (473)
+..+.+++.+||+||.|.... .+..+++.+ .+|.+.++...
T Consensus 37 ~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 37 GLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRS 83 (122)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSC
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCC
Confidence 344566777899999996432 455444433 57777665543
No 244
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=28.11 E-value=60 Score=27.89 Aligned_cols=37 Identities=8% Similarity=0.050 Sum_probs=29.2
Q ss_pred CccEEEEecCC--CccChHHHHHHHHHHHhCCCeEEEEe
Q 036520 3 RKLHVVMLPWS--AFGHLMPFFQLSIALAKSGVKVSFIS 39 (473)
Q Consensus 3 ~~~~vl~~~~~--~~gH~~p~l~la~~L~~~Gh~Vt~~~ 39 (473)
.+|+.+|++.. +.|=..-...|++.|+++|++|.++=
T Consensus 2 ~~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 2 NAMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TTCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 45776666654 44788888999999999999999863
No 245
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=28.09 E-value=80 Score=23.73 Aligned_cols=41 Identities=15% Similarity=0.311 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCcEEEEcCCcc-------hHHHHHHH-----cCCCeEEEecch
Q 036520 107 PFKQFVAQQSVDWIIVDVMSH-------WAGKIAQE-----YHVPLLLFSAFS 147 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~-------~~~~~A~~-----lgiP~v~~~~~~ 147 (473)
+..+.+++.+||+||.|.... .+..+.+. -++|.+.+....
T Consensus 38 ~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 90 (140)
T 2qr3_A 38 SLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYA 90 (140)
T ss_dssp HHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGG
T ss_pred HHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCC
Confidence 344566777899999996432 34433332 368888876544
No 246
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=27.96 E-value=62 Score=29.29 Aligned_cols=42 Identities=7% Similarity=0.039 Sum_probs=23.7
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
|..+++||++...----..-+-.+...++++|++|++++-..
T Consensus 1 m~~~~~vL~v~AHPDDe~l~~ggtla~~~~~G~~V~vv~lT~ 42 (303)
T 1q74_A 1 MSETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCTL 42 (303)
T ss_dssp --CCCEEEEEESSTTHHHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCCeEEEEEeCCchHHHhHHHHHHHHHHCCCcEEEEEEcC
Confidence 655667766543222223334455566677899999887543
No 247
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=27.93 E-value=39 Score=31.03 Aligned_cols=36 Identities=19% Similarity=0.353 Sum_probs=26.9
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|.+..+|+|+=.+..| +..|..|+++|++|+++-..
T Consensus 1 M~~~~dvvIIG~G~~G-----l~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 1 MSTDIDCIVIGAGVVG-----LAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp --CCEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCCcCCEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 6666788888666555 77889999999999998754
No 248
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=27.93 E-value=30 Score=31.58 Aligned_cols=36 Identities=11% Similarity=0.250 Sum_probs=26.9
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCC-eEEEEeCC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGV-KVSFISTP 41 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh-~Vt~~~~~ 41 (473)
|.++|||.++=. |.+-.. +|..|+.+|| +|+++-..
T Consensus 1 M~~~~kI~VIGa---G~~G~~--ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 1 MIERRKIAVIGS---GQIGGN--IAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CCCCCEEEEECC---SHHHHH--HHHHHHHHTCCEEEEECSS
T ss_pred CCCCCEEEEECC---CHHHHH--HHHHHHhCCCceEEEEeCC
Confidence 788899988844 444433 8888999999 98887643
No 249
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=27.90 E-value=54 Score=28.47 Aligned_cols=35 Identities=6% Similarity=0.018 Sum_probs=24.6
Q ss_pred HHHHhCCCcEEEEcCCcc--hHHHHHHHcCCCeEEEe
Q 036520 110 QFVAQQSVDWIIVDVMSH--WAGKIAQEYHVPLLLFS 144 (473)
Q Consensus 110 ~ll~~~~pD~vI~D~~~~--~~~~~A~~lgiP~v~~~ 144 (473)
+.|.+.+||+||...... ....--+..|||++.+.
T Consensus 53 E~i~~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 53 EGILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp HHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 445677999999886542 23344567899999874
No 250
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=27.71 E-value=82 Score=23.60 Aligned_cols=41 Identities=10% Similarity=0.267 Sum_probs=25.7
Q ss_pred HHHHHHHhCCCcEEEEcCCcc--hHHHHHHH-----cCCCeEEEecch
Q 036520 107 PFKQFVAQQSVDWIIVDVMSH--WAGKIAQE-----YHVPLLLFSAFS 147 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~--~~~~~A~~-----lgiP~v~~~~~~ 147 (473)
+..+.+++.+||+||.|.... .+..+.+. -++|.+.++...
T Consensus 40 ~al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (133)
T 3b2n_A 40 DAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFK 87 (133)
T ss_dssp HHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCC
Confidence 344556677899999997542 34444433 257777775543
No 251
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=27.37 E-value=91 Score=28.88 Aligned_cols=34 Identities=9% Similarity=0.116 Sum_probs=24.1
Q ss_pred EEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEc
Q 036520 285 VVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALR 320 (473)
Q Consensus 285 ~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 320 (473)
++++++|+.+ .-..+..++++|.+.|+++.+...
T Consensus 7 il~~~~~~~G--hv~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 7 ILFANVQGHG--HVYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEECCSSHH--HHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEeCCCCc--ccccHHHHHHHHHhCCCEEEEEcC
Confidence 7777777554 234456688888888888888764
No 252
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=27.26 E-value=35 Score=31.41 Aligned_cols=39 Identities=13% Similarity=0.206 Sum_probs=27.2
Q ss_pred CCCccEEEEecCCCccC----hHHHHHHHHHHHhCCCeEEEEeC
Q 036520 1 MARKLHVVMLPWSAFGH----LMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH----~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
|. ||||+++..+..+- +.....++++|.+.||+|..+..
T Consensus 1 m~-~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 1 MN-RIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp -C-CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CC-CcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 54 57898887543322 22567789999989999998764
No 253
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=27.15 E-value=85 Score=26.19 Aligned_cols=36 Identities=22% Similarity=0.176 Sum_probs=29.2
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
..++++..+..|+-.....+++.|+++|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 356777777888888899999999999998877653
No 254
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=27.06 E-value=51 Score=27.73 Aligned_cols=34 Identities=9% Similarity=0.136 Sum_probs=24.1
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
|+|++. |+.|-+- ..++++|.++||+|+.+.-..
T Consensus 1 M~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MKIFIV--GSTGRVG--KSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CEEEEE--STTSHHH--HHHHHHHTTSSCEEEEEESSG
T ss_pred CeEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECCc
Confidence 466554 4445444 578899999999999987543
No 255
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=27.00 E-value=72 Score=26.33 Aligned_cols=37 Identities=19% Similarity=0.378 Sum_probs=29.3
Q ss_pred cEEEEecC--CCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 5 LHVVMLPW--SAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 5 ~~vl~~~~--~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|+++.+.. ++-|=..-...||..|+++|++|.++-.+
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 45555443 56688888999999999999999998765
No 256
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=26.94 E-value=1.1e+02 Score=22.28 Aligned_cols=40 Identities=18% Similarity=0.322 Sum_probs=25.3
Q ss_pred HHHHHHhCCCcEEEEcCCcc--hHHHHHHH----cCCCeEEEecch
Q 036520 108 FKQFVAQQSVDWIIVDVMSH--WAGKIAQE----YHVPLLLFSAFS 147 (473)
Q Consensus 108 l~~ll~~~~pD~vI~D~~~~--~~~~~A~~----lgiP~v~~~~~~ 147 (473)
..+.+++.+||+||.|.... .+..+++. -++|.+.++...
T Consensus 39 a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 84 (123)
T 1xhf_A 39 MHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRD 84 (123)
T ss_dssp HHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCC
T ss_pred HHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCC
Confidence 34556677899999997442 34444433 467777765543
No 257
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=26.92 E-value=1.6e+02 Score=26.39 Aligned_cols=104 Identities=12% Similarity=0.083 Sum_probs=58.3
Q ss_pred CCccEEEEecCCCccChHHHHHHHHHHHhC--CCeEEEEeCCC-c-cccCCCCCCCcccCCCeEEEEecCCccccccccC
Q 036520 2 ARKLHVVMLPWSAFGHLMPFFQLSIALAKS--GVKVSFISTPK-N-IQRLPKPAPESEVAALINFVEFPLPASAALDDKL 77 (473)
Q Consensus 2 ~~~~~vl~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~-~-~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~ 77 (473)
.+++||+++.++. || .+..|..+.... ..+|..+.+.. . ....++ .+|.+..+| .
T Consensus 88 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~--------~gIp~~~~~----------~ 146 (286)
T 3n0v_A 88 NHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHW--------HKIPYYHFA----------L 146 (286)
T ss_dssp TCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHH--------TTCCEEECC----------C
T ss_pred CCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHH--------cCCCEEEeC----------C
Confidence 4567998887765 54 444455554332 36888665432 2 122112 366666654 1
Q ss_pred CCCCCCccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCc-chHHHHHHHcCCCeEEEec
Q 036520 78 LLPEGAEATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMS-HWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 78 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~-~~~~~~A~~lgiP~v~~~~ 145 (473)
.. . + -....+++.+.+++.+||+||.=.+. .-...+-+.+.-.++-+++
T Consensus 147 ~~----------~-~--------r~~~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHp 196 (286)
T 3n0v_A 147 DP----------K-D--------KPGQERKVLQVIEETGAELVILARYMQVLSPELCRRLDGWAINIHH 196 (286)
T ss_dssp BT----------T-B--------HHHHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred Cc----------C-C--------HHHHHHHHHHHHHhcCCCEEEecccccccCHHHHhhhcCCeEEecc
Confidence 10 0 0 01123467788888999999887553 4455555666666776654
No 258
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=26.80 E-value=64 Score=29.47 Aligned_cols=35 Identities=17% Similarity=0.351 Sum_probs=25.6
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCC-eEEEEeC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGV-KVSFIST 40 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh-~Vt~~~~ 40 (473)
|++.|||.++= + |++... +|..|+.+|+ +|+++-.
T Consensus 1 m~~~~kI~VIG--a-G~vG~~--ia~~la~~g~~~v~L~Di 36 (322)
T 1t2d_A 1 MAPKAKIVLVG--S-GMIGGV--MATLIVQKNLGDVVLFDI 36 (322)
T ss_dssp -CCCCEEEEEC--C-SHHHHH--HHHHHHHTTCCEEEEECS
T ss_pred CCCCCEEEEEC--C-CHHHHH--HHHHHHhCCCCeEEEEeC
Confidence 77778998883 3 666655 8899999999 8776653
No 259
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=26.80 E-value=2.9e+02 Score=23.32 Aligned_cols=114 Identities=16% Similarity=0.098 Sum_probs=65.4
Q ss_pred HHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCC
Q 036520 303 EIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGH 382 (473)
Q Consensus 303 ~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~Gv 382 (473)
++++.++..+..++++.+.. .-+|+.+.+..+.+-+-+ |+++ .=..-|...+..|+.+|.
T Consensus 71 ~~~~~l~~~~~Dliv~a~y~-------~il~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~ai~~G~ 130 (216)
T 2ywr_A 71 RMALELKKKGVELVVLAGFM-------RILSHNFLKYFPNKVINI-----------HPSL--IPAFQGLHAQKQAVEFGV 130 (216)
T ss_dssp HHHHHHHHTTCCEEEESSCC-------SCCCHHHHTTSTTCEEEE-----------ESSC--TTTTCSTTHHHHHHHHTC
T ss_pred HHHHHHHhcCCCEEEEeCch-------hhCCHHHHhhccCCeEEE-----------cCCc--CcCCCCccHHHHHHHcCC
Confidence 35555666666666665532 234444443333222222 2222 222358899999999999
Q ss_pred ceeccccc--cccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHHH
Q 036520 383 SLVVLPLI--IDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREAA 446 (473)
Q Consensus 383 P~l~~P~~--~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~ 446 (473)
...++-++ .+..+....+.+.-+ .+.. .-|.++|.+.+.++ + ..-+.+..+.+.
T Consensus 131 ~~tGvTvh~v~~~~D~G~Ii~q~~~--~i~~----~dt~~~L~~rl~~~-~---~~ll~~~l~~~~ 186 (216)
T 2ywr_A 131 KFSGCTVHIVDESVDAGPVIVQAVV--PVLP----EDDENTLADRILKW-E---HKILPQTVQWFA 186 (216)
T ss_dssp SEEEEEEEECCSSSSCSCEEEEEEE--ECCT----TCCHHHHHHHHHHH-H---HHHHHHHHHHHH
T ss_pred CeEEEEEEEEcccCCCCCEEEEEEE--EcCC----CCCHHHHHHHHHHH-H---HHHHHHHHHHHH
Confidence 98888764 466677766655433 2332 45888888877665 3 245555555554
No 260
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=26.41 E-value=2.9e+02 Score=23.23 Aligned_cols=113 Identities=12% Similarity=0.057 Sum_probs=65.3
Q ss_pred HHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCcceeeeccCchhHHHHHhhCC
Q 036520 303 EIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSIGTSLFHAGWGSVIETLQFGH 382 (473)
Q Consensus 303 ~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ItHGG~~s~~eal~~Gv 382 (473)
++++.++..+..++++.+.. .-+|+.+.+..+.+-+-+ |+++ .=...|.+.+..|+.+|.
T Consensus 73 ~~~~~l~~~~~Dliv~a~y~-------~il~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai~~G~ 132 (212)
T 3av3_A 73 EILRELKGRQIDWIALAGYM-------RLIGPTLLSAYEGKIVNI-----------HPSL--LPAFPGKDAIGQAYRAGV 132 (212)
T ss_dssp HHHHHHHHTTCCEEEESSCC-------SCCCHHHHHHTTTCEEEE-----------ESSC--TTSSCSTTHHHHHHHHTC
T ss_pred HHHHHHHhcCCCEEEEchhh-------hhCCHHHHhhhcCCEEEE-----------ecCc--CCCCCCcCHHHHHHHcCC
Confidence 35555666666666665432 234544444433222222 2333 333468899999999999
Q ss_pred ceeccccc--cccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHH
Q 036520 383 SLVVLPLI--IDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREA 445 (473)
Q Consensus 383 P~l~~P~~--~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~ 445 (473)
...++-++ .+..+....+.+.-+ .+.. .-|.++|.+.+.++ + ..-+.+..+.+
T Consensus 133 ~~tGvTvh~v~~~~D~G~Ii~Q~~v--~I~~----~dt~~~L~~r~~~~-~---~~ll~~~l~~~ 187 (212)
T 3av3_A 133 SETGVTVHYVDEGMDTGPVIAQRVV--PIVP----GEPIEALEERIHQV-E---HELYPTVLRML 187 (212)
T ss_dssp SEEEEEEEECCSSSSCSCEEEEEEE--ECCT----TCCHHHHHHHHHHH-H---HHHHHHHHHHH
T ss_pred CeEEEEEEEECCCCCCCCEEEEEEE--ecCC----CCCHHHHHHHHHHH-H---HHHHHHHHHHH
Confidence 99888764 366666666655433 2332 45788888877654 3 24455544444
No 261
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=26.35 E-value=39 Score=31.91 Aligned_cols=60 Identities=13% Similarity=0.232 Sum_probs=40.0
Q ss_pred chHHHhhCCCcceeeeccCchhHHHHHhh----CC-ceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHH
Q 036520 352 PQLEILAHPSIGTSLFHAGWGSVIETLQF----GH-SLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKAL 426 (473)
Q Consensus 352 pq~~ll~~~~~~~~ItHGG~~s~~eal~~----Gv-P~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i 426 (473)
+..++-..+++ +|+=||-||++.|+.. ++ |+|++.... +|.= . .++.+++.+++
T Consensus 107 ~~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G~-----------lGFL-----t---~~~~~~~~~al 165 (388)
T 3afo_A 107 PEQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFALGT-----------LGFL-----S---PFDFKEHKKVF 165 (388)
T ss_dssp CHHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEECSS-----------CCSS-----C---CEEGGGHHHHH
T ss_pred chhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEECCC-----------cccC-----C---cCChHHHHHHH
Confidence 34455566777 9999999999999653 56 788876421 1111 1 23456788888
Q ss_pred HHHhcC
Q 036520 427 RLATVS 432 (473)
Q Consensus 427 ~~ll~~ 432 (473)
+++++|
T Consensus 166 ~~il~g 171 (388)
T 3afo_A 166 QEVISS 171 (388)
T ss_dssp HHHHTT
T ss_pred HHHhcC
Confidence 888874
No 262
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=26.34 E-value=37 Score=31.18 Aligned_cols=34 Identities=18% Similarity=0.203 Sum_probs=26.2
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
.|||+|+=.|..| ..+|..|+++||+|+++....
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~ 36 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARGA 36 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHH
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChH
Confidence 4789988655555 356889999999999998643
No 263
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=26.29 E-value=1.1e+02 Score=22.13 Aligned_cols=40 Identities=28% Similarity=0.304 Sum_probs=25.2
Q ss_pred HHHHHHhCCCcEEEEcCCcc--hHHHHHH----HcCCCeEEEecch
Q 036520 108 FKQFVAQQSVDWIIVDVMSH--WAGKIAQ----EYHVPLLLFSAFS 147 (473)
Q Consensus 108 l~~ll~~~~pD~vI~D~~~~--~~~~~A~----~lgiP~v~~~~~~ 147 (473)
..+.+++.+||+||.|.... .+..+++ .-.+|.+.++...
T Consensus 37 a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (120)
T 2a9o_A 37 ALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKD 82 (120)
T ss_dssp HHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCC
T ss_pred HHHHHHhCCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 33455667899999996432 3444433 3468888776544
No 264
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=26.27 E-value=1.5e+02 Score=24.90 Aligned_cols=46 Identities=17% Similarity=0.050 Sum_probs=31.3
Q ss_pred hhccccCCCCCcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEE
Q 036520 273 IFQWLDEQKPRSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWA 318 (473)
Q Consensus 273 ~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 318 (473)
+.+|+.+...+.++||..+|......+.+..+.+++++.|..+.++
T Consensus 18 ~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 18 FTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 3445533333558999888765444567788999999999876553
No 265
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=26.14 E-value=3.5e+02 Score=25.66 Aligned_cols=137 Identities=12% Similarity=0.025 Sum_probs=77.1
Q ss_pred CcEEEEeecCcccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcCCCceEEecccchHHHhhCCCc
Q 036520 283 RSVVFVGFGSECKLSKDQVYEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIRGKGIVSIGWAPQLEILAHPSI 362 (473)
Q Consensus 283 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~ll~~~~~ 362 (473)
.+.|-|-+||.. +....++++..|+..|.++-+-+.+. ...|+...+.. .+. ....+
T Consensus 265 ~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~sa-------HR~p~~~~~~~-----------~~~---~~~g~ 321 (425)
T 2h31_A 265 QCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSA-------HKGPDETLRIK-----------AEY---EGDGI 321 (425)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT-------TTCHHHHHHHH-----------HHH---HTTCC
T ss_pred CCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeec-------cCCHHHHHHHH-----------HHH---HHCCC
Confidence 357778788875 77788888888889888866555443 22344221111 000 01112
Q ss_pred -ceeeeccCch----hHHHHHhhCCceeccccccc-ccccee-eeee--cceEEEEecCCCCCcCHHHHHHHHHHHhcCc
Q 036520 363 -GTSLFHAGWG----SVIETLQFGHSLVVLPLIID-QPLNAR-LLVD--KDLAVQVERKDDGSFTRDGIAKALRLATVSE 433 (473)
Q Consensus 363 -~~~ItHGG~~----s~~eal~~GvP~l~~P~~~D-Q~~na~-~v~~--~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~ 433 (473)
.++|.-+|.. ++..++ .-+|+|.+|.... +-..|- -+.+ .|+.+..-.. -.++.-++..|. .+.
T Consensus 322 ~~viIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~g~pvatv~~---~~nAa~~A~~Il-~~~-- 394 (425)
T 2h31_A 322 PTVFVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLS---PEGSAQFAAQIF-GLS-- 394 (425)
T ss_dssp CEEEEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCSSCCCEECCC---HHHHHHHHHHHH-HTT--
T ss_pred CeEEEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCCCCceEEecC---chHHHHHHHHHH-ccC--
Confidence 1377776653 444444 4799999998421 110000 1223 3655433222 456666666664 345
Q ss_pred chHHHHHHHHHHHHHhc
Q 036520 434 EGEKLRVRAREAANTFN 450 (473)
Q Consensus 434 ~~~~~~~~a~~~~~~~~ 450 (473)
++.++++.+..+....
T Consensus 395 -~~~l~~kl~~~~~~~~ 410 (425)
T 2h31_A 395 -NHLVWSKLRASILNTW 410 (425)
T ss_dssp -CHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHH
Confidence 6888888888877664
No 266
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=25.98 E-value=1.1e+02 Score=30.54 Aligned_cols=78 Identities=9% Similarity=0.131 Sum_probs=45.4
Q ss_pred HHHHHHHhcCCCCEEEEEcCCCCCCCccccCchhhhhhcC-C-CceEEeccc-chHHHh-------hCCCcceeeeccC-
Q 036520 302 YEIAYGLELSGLPFLWALRKPEWATDDVDALPLGFADTIR-G-KGIVSIGWA-PQLEIL-------AHPSIGTSLFHAG- 370 (473)
Q Consensus 302 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~-~-~nv~~~~~~-pq~~ll-------~~~~~~~~ItHGG- 370 (473)
+.+++.|.+.|.+.++.++++... .+...+. . +.++...-. .|.+.+ ..-..+++++|.|
T Consensus 8 ~~lv~~L~~~GV~~vfg~PG~~~~---------~l~~al~~~~~~i~~i~~~~E~~Aa~~A~GyAr~tgk~~v~~~tsGp 78 (590)
T 1v5e_A 8 LAVMKILESWGADTIYGIPSGTLS---------SLMDAMGEEENNVKFLQVKHEEVGAMAAVMQSKFGGNLGVTVGSGGP 78 (590)
T ss_dssp HHHHHHHHHTTCCEEEECCCTTTH---------HHHTTSSSTTCCCEEEECSSHHHHHHHHHHHHHTTCCCCEEEECTTH
T ss_pred HHHHHHHHHcCCCEEEEecCCchH---------HHHHHHHhcCCCCeEEeeCCHHHHHHHHHHHHHHHCCCEEEEeCcCh
Confidence 557777778888888887765321 1111111 1 234332211 122211 1123445999988
Q ss_pred -----chhHHHHHhhCCceeccc
Q 036520 371 -----WGSVIETLQFGHSLVVLP 388 (473)
Q Consensus 371 -----~~s~~eal~~GvP~l~~P 388 (473)
.+.+.||.+.++|+|++-
T Consensus 79 G~~N~~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 79 GASHLINGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp HHHTTHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCEEEEc
Confidence 578999999999999984
No 267
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A*
Probab=25.85 E-value=1.6e+02 Score=27.72 Aligned_cols=31 Identities=19% Similarity=0.191 Sum_probs=23.5
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhC-CCeEEEEeC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKS-GVKVSFIST 40 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~-Gh~Vt~~~~ 40 (473)
|+|+++-.++ .+..++..|+++ |+++.++.+
T Consensus 1 m~ililG~g~-----r~~~~a~~~~~~~g~~~v~~~~ 32 (422)
T 2xcl_A 1 MNVLIIGKGG-----REHTLAWKAAQSSLVENVFAAP 32 (422)
T ss_dssp CEEEEEECSH-----HHHHHHHHHTTCTTCSEEEEEE
T ss_pred CEEEEECCCH-----HHHHHHHHHHhCCCCCEEEEeC
Confidence 6788886663 577889988775 899887764
No 268
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=25.81 E-value=1.1e+02 Score=22.53 Aligned_cols=40 Identities=13% Similarity=0.213 Sum_probs=24.8
Q ss_pred HHHHHHHhC-CCcEEEEcCCcc---hHHHHHHH-----cCCCeEEEecc
Q 036520 107 PFKQFVAQQ-SVDWIIVDVMSH---WAGKIAQE-----YHVPLLLFSAF 146 (473)
Q Consensus 107 ~l~~ll~~~-~pD~vI~D~~~~---~~~~~A~~-----lgiP~v~~~~~ 146 (473)
+..+.+++. +||+||.|.... .+..+++. -++|.+.+...
T Consensus 40 ~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~ 88 (132)
T 2rdm_A 40 KAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGH 88 (132)
T ss_dssp HHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESS
T ss_pred HHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 344556666 899999996432 34444432 26888877553
No 269
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=25.79 E-value=46 Score=26.10 Aligned_cols=35 Identities=9% Similarity=0.160 Sum_probs=27.8
Q ss_pred EEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCCc
Q 036520 6 HVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPKN 43 (473)
Q Consensus 6 ~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~ 43 (473)
++++++.+. =+.|++.+++.|.++|.+|+++ ....
T Consensus 20 ~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R~ 54 (142)
T 3lyu_A 20 KILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVTF 54 (142)
T ss_dssp EEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEEE
T ss_pred eEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 677766654 3899999999999999999988 5443
No 270
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=25.77 E-value=1.1e+02 Score=22.84 Aligned_cols=41 Identities=0% Similarity=0.028 Sum_probs=25.2
Q ss_pred HHHHHHHhCCCcEEEEcCCcc--hHHHHHHH-----cCCCeEEEecch
Q 036520 107 PFKQFVAQQSVDWIIVDVMSH--WAGKIAQE-----YHVPLLLFSAFS 147 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~--~~~~~A~~-----lgiP~v~~~~~~ 147 (473)
+..+.+++.+||+||.|.... .+..+.+. -++|.+.++...
T Consensus 38 ~al~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (132)
T 3crn_A 38 EGLAKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYA 85 (132)
T ss_dssp HHHHHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCC
T ss_pred HHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccc
Confidence 334556677899999996442 34444332 357777765543
No 271
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=25.67 E-value=95 Score=23.40 Aligned_cols=40 Identities=8% Similarity=0.170 Sum_probs=25.4
Q ss_pred HHHHHHhCCCcEEEEcCCcc--hHHHHHHHc----CCCeEEEecch
Q 036520 108 FKQFVAQQSVDWIIVDVMSH--WAGKIAQEY----HVPLLLFSAFS 147 (473)
Q Consensus 108 l~~ll~~~~pD~vI~D~~~~--~~~~~A~~l----giP~v~~~~~~ 147 (473)
..+.+++.+||+||.|.... .+..+++.+ .+|.+.+....
T Consensus 40 al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~ 85 (136)
T 2qzj_A 40 AIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYIN 85 (136)
T ss_dssp HHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCC
Confidence 34556677899999996432 345444332 67888775543
No 272
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=25.62 E-value=1e+02 Score=22.83 Aligned_cols=41 Identities=20% Similarity=0.225 Sum_probs=24.5
Q ss_pred HHHHHHHhCCCcEEEEcCCcc--hHHHHHH-----HcCCCeEEEecch
Q 036520 107 PFKQFVAQQSVDWIIVDVMSH--WAGKIAQ-----EYHVPLLLFSAFS 147 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~--~~~~~A~-----~lgiP~v~~~~~~ 147 (473)
+..+.+++.+||+||.|.... .+..+.+ .-++|.+.+....
T Consensus 42 ~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 42 DALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp HHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred HHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCC
Confidence 344566778999999996432 2333332 2357888776544
No 273
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=25.59 E-value=56 Score=29.60 Aligned_cols=33 Identities=24% Similarity=0.378 Sum_probs=25.6
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
|||+|+=.|+.|- .+|..|+++||+|+++....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc
Confidence 5799987777663 45788999999999998654
No 274
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=25.58 E-value=58 Score=28.95 Aligned_cols=37 Identities=24% Similarity=0.275 Sum_probs=24.4
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCC-CeEEEEeCC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSG-VKVSFISTP 41 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~G-h~Vt~~~~~ 41 (473)
|..+++|++. |+.|.+- ..++++|.++| |+|+.++..
T Consensus 2 M~~~~~ilVt--GatG~iG--~~l~~~L~~~g~~~V~~~~R~ 39 (299)
T 2wm3_A 2 MVDKKLVVVF--GGTGAQG--GSVARTLLEDGTFKVRVVTRN 39 (299)
T ss_dssp --CCCEEEEE--TTTSHHH--HHHHHHHHHHCSSEEEEEESC
T ss_pred CCCCCEEEEE--CCCchHH--HHHHHHHHhcCCceEEEEEcC
Confidence 5545566554 4556554 45788899888 999988754
No 275
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=25.46 E-value=54 Score=29.03 Aligned_cols=32 Identities=25% Similarity=0.230 Sum_probs=23.4
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|||+|+=.|..| ..+|..|+++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 577777544444 36789999999999998643
No 276
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=25.45 E-value=47 Score=29.83 Aligned_cols=32 Identities=25% Similarity=0.429 Sum_probs=23.8
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
.|+|+|+=.|..| ..+|..|+++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEEC
Confidence 4789888554444 3568899999999999865
No 277
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=25.26 E-value=76 Score=28.83 Aligned_cols=32 Identities=13% Similarity=0.282 Sum_probs=24.9
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
.|+|.|+=.|..| ..+|+.|+++||+|+++..
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 4689998555555 5688899999999998754
No 278
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=25.22 E-value=3.1e+02 Score=23.14 Aligned_cols=69 Identities=4% Similarity=0.071 Sum_probs=44.7
Q ss_pred ccCchhHHHHHhhCCceeccccc--cccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHH
Q 036520 368 HAGWGSVIETLQFGHSLVVLPLI--IDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREA 445 (473)
Q Consensus 368 HGG~~s~~eal~~GvP~l~~P~~--~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~ 445 (473)
..|...+..|+.+|....++-++ .+..+....+.+.-+ .+.. .-|.++|.+.+.++ + ..-|.+..+.+
T Consensus 117 yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v--~I~~----~dt~~~L~~rl~~~-~---~~ll~~~l~~l 186 (211)
T 3p9x_A 117 FPGLHAIEQAIRANVKVTGVTIHYVDEGMDTGPIIAQEAV--SIEE----EDTLETLTTKIQAV-E---HRLYPATLHKL 186 (211)
T ss_dssp SCSSCHHHHHHHTTCSEEEEEEEECCSSSSCSCEEEEEEE--ECCT----TCCHHHHHHHHHHH-H---HHHHHHHHHHH
T ss_pred CCCccHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEEEEEE--ecCC----CCCHHHHHHHHHHH-H---HHHHHHHHHHH
Confidence 34889999999999999888764 466666666654422 2332 45888888877764 3 24455544444
Q ss_pred H
Q 036520 446 A 446 (473)
Q Consensus 446 ~ 446 (473)
.
T Consensus 187 ~ 187 (211)
T 3p9x_A 187 L 187 (211)
T ss_dssp T
T ss_pred H
Confidence 3
No 279
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=25.22 E-value=1.6e+02 Score=21.60 Aligned_cols=35 Identities=11% Similarity=0.126 Sum_probs=27.0
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIS 39 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~ 39 (473)
+||+++|..+-|-=.-.-.+-+.+.++|.++.+-.
T Consensus 4 kkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a 38 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEA 38 (106)
T ss_dssp EEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEE
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEE
Confidence 48999999877555555688888888999887654
No 280
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=25.15 E-value=54 Score=29.85 Aligned_cols=33 Identities=30% Similarity=0.405 Sum_probs=25.9
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
|||+|+=.|+.|- .+|..|++.||+|+++....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh
Confidence 6899986665553 56788999999999998654
No 281
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=25.09 E-value=1.1e+02 Score=22.87 Aligned_cols=37 Identities=11% Similarity=0.041 Sum_probs=29.1
Q ss_pred CccEEEEecCCCccChHH-HHHHHHHHHhCCCeEEEEe
Q 036520 3 RKLHVVMLPWSAFGHLMP-FFQLSIALAKSGVKVSFIS 39 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p-~l~la~~L~~~Gh~Vt~~~ 39 (473)
+++||+++|..+.|.-.- .-.+-+.+.+.|.++.+-.
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 346899999999999774 6777788888999875543
No 282
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=25.07 E-value=91 Score=22.81 Aligned_cols=39 Identities=13% Similarity=0.296 Sum_probs=24.1
Q ss_pred HHHHHhCCCcEEEEcCCcc--hHHHHHHH-----cCCCeEEEecch
Q 036520 109 KQFVAQQSVDWIIVDVMSH--WAGKIAQE-----YHVPLLLFSAFS 147 (473)
Q Consensus 109 ~~ll~~~~pD~vI~D~~~~--~~~~~A~~-----lgiP~v~~~~~~ 147 (473)
.+.+++.+||+||.|.... .+..+++. -++|.+.++...
T Consensus 40 ~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (124)
T 1srr_A 40 LDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYG 85 (124)
T ss_dssp HHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccC
Confidence 3445566899999996442 34444433 357877775543
No 283
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=25.04 E-value=71 Score=28.55 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=24.4
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
+|+|++. |+.|.+-. .|+++|.++||+|+.+....
T Consensus 7 ~~~vlVt--GatG~iG~--~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 7 KHRILIT--GGAGFIGG--HLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp CCEEEEE--TTTSHHHH--HHHHHHHHTTCCEEEECCCS
T ss_pred CCeEEEE--CCCChHHH--HHHHHHHHCCCEEEEEecCC
Confidence 3466554 45565543 68899999999999987543
No 284
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=25.04 E-value=58 Score=30.00 Aligned_cols=35 Identities=14% Similarity=0.280 Sum_probs=23.4
Q ss_pred HHHHhCCCcEEEEcCCcc-hHHHHHHHcCCCeEEEe
Q 036520 110 QFVAQQSVDWIIVDVMSH-WAGKIAQEYHVPLLLFS 144 (473)
Q Consensus 110 ~ll~~~~pD~vI~D~~~~-~~~~~A~~lgiP~v~~~ 144 (473)
+.|.+.+||+||...... ......+.+|||++.+.
T Consensus 90 E~Ilal~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 90 ESLITLQPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp HHHHHHCCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred HHHhcCCCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 334556999999875432 22245678899999874
No 285
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=24.75 E-value=1.4e+02 Score=21.32 Aligned_cols=31 Identities=13% Similarity=0.018 Sum_probs=23.8
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIS 39 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~ 39 (473)
.+|+++|..+ ......+..|.+.|++|..+.
T Consensus 57 ~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~ 87 (100)
T 3foj_A 57 ETYYIICKAG----GRSAQVVQYLEQNGVNAVNVE 87 (100)
T ss_dssp SEEEEECSSS----HHHHHHHHHHHTTTCEEEEET
T ss_pred CcEEEEcCCC----chHHHHHHHHHHCCCCEEEec
Confidence 4688888543 457788999999999887665
No 286
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=24.57 E-value=2.3e+02 Score=25.31 Aligned_cols=104 Identities=9% Similarity=0.088 Sum_probs=58.4
Q ss_pred CCccEEEEecCCCccChHHHHHHHHHHHhC--CCeEEEEeCCC-c-cccCCCCCCCcccCCCeEEEEecCCccccccccC
Q 036520 2 ARKLHVVMLPWSAFGHLMPFFQLSIALAKS--GVKVSFISTPK-N-IQRLPKPAPESEVAALINFVEFPLPASAALDDKL 77 (473)
Q Consensus 2 ~~~~~vl~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~-~-~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~ 77 (473)
.+++||+++.++. || .+..|..+.... ..+|.++.+.. . ...+++ .+|.+..+| .
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~--------~gIp~~~~~----------~ 151 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQ--------HGLPFRHFP----------I 151 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHH--------TTCCEEECC----------C
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHH--------cCCCEEEeC----------C
Confidence 4567998887654 65 345555554433 36888666432 1 122112 366666665 1
Q ss_pred CCCCCCccCCCCChhhHHHHHHHHhhhhhHHHHHHHhCCCcEEEEcCCc-chHHHHHHHcCCCeEEEec
Q 036520 78 LLPEGAEATVDIPSENIQYLKIAYDLLQHPFKQFVAQQSVDWIIVDVMS-HWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 78 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~pD~vI~D~~~-~~~~~~A~~lgiP~v~~~~ 145 (473)
.. . .. ....+++.+.+++.+||+||.=.+. .-...+-+.+.-.++-+++
T Consensus 152 ~~-------~--~r----------~~~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHp 201 (292)
T 3lou_A 152 TA-------D--TK----------AQQEAQWLDVFETSGAELVILARYMQVLSPEASARLANRAINIHH 201 (292)
T ss_dssp CS-------S--CH----------HHHHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred Cc-------C--CH----------HHHHHHHHHHHHHhCCCEEEecCchhhCCHHHHhhhcCCeEEeCC
Confidence 10 0 00 0123467788888999998887554 4445555666666676644
No 287
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=24.54 E-value=40 Score=26.19 Aligned_cols=33 Identities=21% Similarity=0.338 Sum_probs=24.3
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
.||+++=++..| ..+++.|.++||+|+++....
T Consensus 8 ~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 467777543333 478899999999999988643
No 288
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=24.49 E-value=1e+02 Score=23.58 Aligned_cols=42 Identities=19% Similarity=0.259 Sum_probs=26.8
Q ss_pred hHHHHHHHhCCCcEEEEcCCc--chHHHHHHH-----cCCCeEEEecch
Q 036520 106 HPFKQFVAQQSVDWIIVDVMS--HWAGKIAQE-----YHVPLLLFSAFS 147 (473)
Q Consensus 106 ~~l~~ll~~~~pD~vI~D~~~--~~~~~~A~~-----lgiP~v~~~~~~ 147 (473)
.+..+.+++.+||+||.|... ..+..+++. -++|.+.++...
T Consensus 56 ~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 104 (150)
T 4e7p_A 56 QEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFK 104 (150)
T ss_dssp HHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 345566778899999999643 234444432 357777776543
No 289
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=24.47 E-value=51 Score=29.99 Aligned_cols=35 Identities=26% Similarity=0.413 Sum_probs=25.4
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
.+|||+|+=.|+.| ..+|..|++.||+|+++..+.
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~ 52 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQ 52 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHH
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHh
Confidence 45789988666656 457888999999999984433
No 290
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=24.43 E-value=87 Score=28.32 Aligned_cols=33 Identities=18% Similarity=0.110 Sum_probs=24.0
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhC-C-CeEEEEeCC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKS-G-VKVSFISTP 41 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~-G-h~Vt~~~~~ 41 (473)
++|+|+++..+.. +++++.|++. | ++|..+...
T Consensus 3 ~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 3 QKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred ccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 4579999855544 4789999886 6 888777543
No 291
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=24.43 E-value=57 Score=28.52 Aligned_cols=33 Identities=15% Similarity=0.064 Sum_probs=26.5
Q ss_pred cEEEEecCCCc--cChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 5 LHVVMLPWSAF--GHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 5 ~~vl~~~~~~~--gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
.+|++++.++. |+ -+.+|+.|+.+|++|+++..
T Consensus 59 ~~v~VlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~ 93 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGD---GLVCARHLKLFGYNPVVFYP 93 (246)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCCEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEc
Confidence 48999998765 33 37899999999999998764
No 292
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=24.36 E-value=21 Score=18.38 Aligned_cols=17 Identities=29% Similarity=0.599 Sum_probs=13.5
Q ss_pred CchhHHHHHhhCCceec
Q 036520 370 GWGSVIETLQFGHSLVV 386 (473)
Q Consensus 370 G~~s~~eal~~GvP~l~ 386 (473)
|.|+++..+..|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 66888888888888764
No 293
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=24.32 E-value=1.1e+02 Score=26.17 Aligned_cols=36 Identities=11% Similarity=0.124 Sum_probs=26.6
Q ss_pred EEEEecCCCccC----hHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 6 HVVMLPWSAFGH----LMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 6 ~vl~~~~~~~gH----~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
+|.+++....+- ..-...|++.|+++|+.|+.-...
T Consensus 15 ~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~ 54 (215)
T 2a33_A 15 RICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGS 54 (215)
T ss_dssp EEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred eEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCCh
Confidence 688887776642 345788999999999988765543
No 294
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=24.29 E-value=94 Score=27.74 Aligned_cols=39 Identities=21% Similarity=0.373 Sum_probs=29.2
Q ss_pred CCccEEEEecCCCccChHH--HHHHHHHHHhCC-CeEEEEeCC
Q 036520 2 ARKLHVVMLPWSAFGHLMP--FFQLSIALAKSG-VKVSFISTP 41 (473)
Q Consensus 2 ~~~~~vl~~~~~~~gH~~p--~l~la~~L~~~G-h~Vt~~~~~ 41 (473)
.++.|||++ .+..+|-.+ .-.|++.|.+.| .+|++...+
T Consensus 2 ~~~~kvLiv-~G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLI-TGQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEE-ESCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEE-cCCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 367899999 445588644 356788888888 999999764
No 295
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=24.29 E-value=69 Score=30.77 Aligned_cols=37 Identities=19% Similarity=0.169 Sum_probs=30.3
Q ss_pred EEEecCCCccChHHHHHHHHHHHh-CCCeEEEEeCCCc
Q 036520 7 VVMLPWSAFGHLMPFFQLSIALAK-SGVKVSFISTPKN 43 (473)
Q Consensus 7 vl~~~~~~~gH~~p~l~la~~L~~-~Gh~Vt~~~~~~~ 43 (473)
+++...|+.|=..-++.+|...+. .|..|.+++....
T Consensus 203 ~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~ 240 (444)
T 2q6t_A 203 NIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMP 240 (444)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSC
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 566677788999999999999887 4899999987654
No 296
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=24.19 E-value=79 Score=25.61 Aligned_cols=37 Identities=24% Similarity=0.392 Sum_probs=28.0
Q ss_pred EEEEecCCCc---cChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 6 HVVMLPWSAF---GHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 6 ~vl~~~~~~~---gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
+|+++|.-+- ---.+...|++.|.++|.+|.|+..|-
T Consensus 25 ~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 25 KVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp EEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred eEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 6777775332 123478899999999999999999654
No 297
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=24.13 E-value=70 Score=27.75 Aligned_cols=35 Identities=9% Similarity=-0.045 Sum_probs=23.5
Q ss_pred HHHHhCCCcEEEEcCCc--chHHHHHHHcCCCeEEEe
Q 036520 110 QFVAQQSVDWIIVDVMS--HWAGKIAQEYHVPLLLFS 144 (473)
Q Consensus 110 ~ll~~~~pD~vI~D~~~--~~~~~~A~~lgiP~v~~~ 144 (473)
+.|.+.+||+||..... .....--++.|||++.+.
T Consensus 53 E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 53 EGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp HHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 44566799999987542 223344467899998773
No 298
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=24.10 E-value=1.4e+02 Score=21.42 Aligned_cols=41 Identities=17% Similarity=0.211 Sum_probs=25.6
Q ss_pred HHHHHHHhCCCcEEEEcCCcc--hHHHHHHH-----cCCCeEEEecch
Q 036520 107 PFKQFVAQQSVDWIIVDVMSH--WAGKIAQE-----YHVPLLLFSAFS 147 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~--~~~~~A~~-----lgiP~v~~~~~~ 147 (473)
+..+.+++.+||++|.|.... .+..+.+. -.+|.+.++...
T Consensus 35 ~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 82 (121)
T 2pl1_A 35 EADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARE 82 (121)
T ss_dssp HHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCC
T ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCC
Confidence 344556777899999996442 34444332 357888776543
No 299
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=23.89 E-value=1e+02 Score=23.75 Aligned_cols=42 Identities=14% Similarity=0.093 Sum_probs=26.4
Q ss_pred hHHHHHHHhCCCcEEEEcCCc--chHHHHHHH-----cCCCeEEEecch
Q 036520 106 HPFKQFVAQQSVDWIIVDVMS--HWAGKIAQE-----YHVPLLLFSAFS 147 (473)
Q Consensus 106 ~~l~~ll~~~~pD~vI~D~~~--~~~~~~A~~-----lgiP~v~~~~~~ 147 (473)
.+..+.+++.+||+||.|... ..+..+.+. -++|.|.+....
T Consensus 48 ~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 48 TQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
Confidence 344566677899999999643 234444332 367877765543
No 300
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=23.88 E-value=1.2e+02 Score=27.22 Aligned_cols=38 Identities=13% Similarity=-0.013 Sum_probs=29.3
Q ss_pred ccEEEEecCCCcc-C---hHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 4 KLHVVMLPWSAFG-H---LMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 4 ~~~vl~~~~~~~g-H---~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
++||+++..+..+ | +.....++++|.+.||+|..+.+.
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689888876443 2 456788999999999999998743
No 301
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=23.84 E-value=59 Score=29.53 Aligned_cols=34 Identities=18% Similarity=0.075 Sum_probs=27.0
Q ss_pred cEEEEecCCCc--cChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 5 LHVVMLPWSAF--GHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 5 ~~vl~~~~~~~--gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
.+|+++|.++- |+ -+.+|+.|+.+|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEec
Confidence 37999998765 43 378999999999999987643
No 302
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=23.76 E-value=81 Score=25.64 Aligned_cols=37 Identities=24% Similarity=0.369 Sum_probs=28.0
Q ss_pred EEEEecCCCc--c-ChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 6 HVVMLPWSAF--G-HLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 6 ~vl~~~~~~~--g-H~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
+|+++|.-+- . --.+...|++.|.++|.+|.|+..|-
T Consensus 24 ~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 24 SIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp EEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred eEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 6777775432 2 23478899999999999999999654
No 303
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=23.76 E-value=97 Score=22.57 Aligned_cols=38 Identities=16% Similarity=0.254 Sum_probs=23.1
Q ss_pred HHHHHHhCCCcEEEEcCCcc--hHHHHHHH-------cCCCeEEEec
Q 036520 108 FKQFVAQQSVDWIIVDVMSH--WAGKIAQE-------YHVPLLLFSA 145 (473)
Q Consensus 108 l~~ll~~~~pD~vI~D~~~~--~~~~~A~~-------lgiP~v~~~~ 145 (473)
..+.+++.+||+||.|.... .+..+++. -.+|.+.++.
T Consensus 37 a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 83 (124)
T 1mb3_A 37 ALSIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTA 83 (124)
T ss_dssp HHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC-
T ss_pred HHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEEC
Confidence 34455667899999996442 34444432 2577777644
No 304
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=23.70 E-value=31 Score=29.30 Aligned_cols=32 Identities=13% Similarity=0.189 Sum_probs=23.4
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|||+++=. |.+ -..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECC
Confidence 56666643 433 457899999999999998754
No 305
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=23.65 E-value=1.7e+02 Score=23.24 Aligned_cols=39 Identities=15% Similarity=0.236 Sum_probs=29.2
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
++|||+|+.+++.-. .-+....+.|.+.|++|++++...
T Consensus 1 ~~~ki~il~~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~~ 39 (168)
T 3l18_A 1 ASMKVLFLSADGFED-LELIYPLHRIKEEGHEVYVASFQR 39 (168)
T ss_dssp CCCEEEEECCTTBCH-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCcEEEEEeCCCccH-HHHHHHHHHHHHCCCEEEEEECCC
Confidence 467999988876533 445566788888999999998654
No 306
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=23.59 E-value=61 Score=28.19 Aligned_cols=36 Identities=3% Similarity=-0.022 Sum_probs=23.9
Q ss_pred HHHHhCCCcEEEEcCCc-chHHHHHHHcCCCeEEEec
Q 036520 110 QFVAQQSVDWIIVDVMS-HWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 110 ~ll~~~~pD~vI~D~~~-~~~~~~A~~lgiP~v~~~~ 145 (473)
+.|.+.+||+||..... ......-++.|||++.+..
T Consensus 54 E~i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 54 EAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp HHHHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred HHHHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 34566799999986432 1223445678999988754
No 307
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=23.58 E-value=49 Score=32.77 Aligned_cols=35 Identities=11% Similarity=0.059 Sum_probs=28.5
Q ss_pred hHHHHHHHhCCCcEEEEcCCcchHHHHHHHcCCCeEEE
Q 036520 106 HPFKQFVAQQSVDWIIVDVMSHWAGKIAQEYHVPLLLF 143 (473)
Q Consensus 106 ~~l~~ll~~~~pD~vI~D~~~~~~~~~A~~lgiP~v~~ 143 (473)
.++.+++++.+||++|... ....+|+++|||++.+
T Consensus 446 ~el~~~i~~~~pDl~ig~~---~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 446 HDMEVVLEKLKPDMFFAGI---KEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHHHHCCSEEEECH---HHHHHHHHTTCEEEET
T ss_pred HHHHHHHHhcCCCEEEccc---chhHHHHhcCCCEEEe
Confidence 3577888999999999874 3567899999999854
No 308
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=23.50 E-value=82 Score=27.56 Aligned_cols=37 Identities=14% Similarity=0.291 Sum_probs=29.2
Q ss_pred CccEEEEecCCC--ccChHHHHHHHHHHHhCCCeEEEEe
Q 036520 3 RKLHVVMLPWSA--FGHLMPFFQLSIALAKSGVKVSFIS 39 (473)
Q Consensus 3 ~~~~vl~~~~~~--~gH~~p~l~la~~L~~~Gh~Vt~~~ 39 (473)
++|+.+|++... .|=..-...|++.|+++|++|.++=
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 457777666543 4778888999999999999999873
No 309
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=23.49 E-value=56 Score=29.92 Aligned_cols=33 Identities=15% Similarity=0.271 Sum_probs=25.3
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
+|||.|+=.|..| ..+|..|+++||+|+++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 3688888665555 46789999999999998753
No 310
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=23.44 E-value=89 Score=25.71 Aligned_cols=36 Identities=11% Similarity=0.236 Sum_probs=26.6
Q ss_pred cEEEEecCCCccChHHHHH-HHHHHHhCCCeEEEEeC
Q 036520 5 LHVVMLPWSAFGHLMPFFQ-LSIALAKSGVKVSFIST 40 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~-la~~L~~~Gh~Vt~~~~ 40 (473)
|||+++-+...|+..-+.. +++.|.+.|++|.++.-
T Consensus 6 ~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 42 (200)
T 2a5l_A 6 PYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTV 42 (200)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBC
T ss_pred ceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 4888887777888776554 46667778999988764
No 311
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=23.30 E-value=1.1e+02 Score=22.46 Aligned_cols=39 Identities=10% Similarity=0.082 Sum_probs=24.4
Q ss_pred HHHHHHHhCCCcEEEEcCCc--chHHHHHH-------HcCCCeEEEec
Q 036520 107 PFKQFVAQQSVDWIIVDVMS--HWAGKIAQ-------EYHVPLLLFSA 145 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~--~~~~~~A~-------~lgiP~v~~~~ 145 (473)
+..+.+++.+||+||.|... ..+..+++ ..++|.+.+..
T Consensus 38 ~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 85 (127)
T 3i42_A 38 DALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSG 85 (127)
T ss_dssp HHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEEC
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEEC
Confidence 44556677899999999643 23444433 23567776654
No 312
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=23.22 E-value=38 Score=31.53 Aligned_cols=39 Identities=15% Similarity=0.099 Sum_probs=26.9
Q ss_pred CCCccEEEEecCCCccCh----HHHHHHHHHHHhCCCeEEEEeC
Q 036520 1 MARKLHVVMLPWSAFGHL----MPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~----~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
|. ||||+++..+..+-- .....++++|.++||+|..+..
T Consensus 1 m~-~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (364)
T 2i87_A 1 MT-KENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYI 43 (364)
T ss_dssp ---CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEE
T ss_pred CC-CcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEE
Confidence 53 579988886533322 3457788999889999998763
No 313
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=23.13 E-value=1.4e+02 Score=22.92 Aligned_cols=41 Identities=10% Similarity=0.152 Sum_probs=25.5
Q ss_pred HHHHHHHhCCCcEEEEcCCcc--hHHHHHHH-----cCCCeEEEecch
Q 036520 107 PFKQFVAQQSVDWIIVDVMSH--WAGKIAQE-----YHVPLLLFSAFS 147 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~--~~~~~A~~-----lgiP~v~~~~~~ 147 (473)
+..+.+++.+||+||.|.... .+..+.+. -++|.+.+....
T Consensus 42 ~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 42 EAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp HHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred HHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 344566777899999996432 34433332 367888776543
No 314
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=23.05 E-value=1.1e+02 Score=26.59 Aligned_cols=37 Identities=16% Similarity=0.091 Sum_probs=25.9
Q ss_pred CCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 2 ARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 2 ~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
..+||.++++.++. -+ -..++++|+++|++|.++...
T Consensus 4 ~~~~k~vlVTGas~-gI--G~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 4 GRFVRHALITAGTK-GL--GKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp --CCCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEESS
T ss_pred ccccCEEEEeCCCc-hh--HHHHHHHHHHCCCEEEEEcCC
Confidence 34567777776554 23 257899999999999987543
No 315
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=23.01 E-value=1.5e+02 Score=25.49 Aligned_cols=37 Identities=19% Similarity=0.177 Sum_probs=27.2
Q ss_pred EEEEecCCCc-----------cChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 6 HVVMLPWSAF-----------GHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 6 ~vl~~~~~~~-----------gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
||+|+..... -...=+......|.++|++|++++...
T Consensus 5 kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 5 KVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp EEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred eEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 7888776422 134567777888999999999998643
No 316
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=22.95 E-value=65 Score=29.62 Aligned_cols=35 Identities=26% Similarity=0.428 Sum_probs=27.2
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
|....+|+|+=.+..| +.+|.+|+++|++|+++-.
T Consensus 3 m~~~~dVvVIG~Gi~G-----ls~A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIG-----LSSALILARKGYSVHILAR 37 (363)
T ss_dssp CCCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCEEEECCCHHH-----HHHHHHHHhCCCEEEEEec
Confidence 5556788888666545 6788899999999999964
No 317
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=22.88 E-value=62 Score=28.54 Aligned_cols=34 Identities=18% Similarity=0.075 Sum_probs=26.8
Q ss_pred cEEEEecCCCc--cChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 5 LHVVMLPWSAF--GHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 5 ~~vl~~~~~~~--gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
.+|++++.++. |+ -+.+|+.|+.+|++|+++...
T Consensus 86 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEec
Confidence 37999988665 33 378999999999999987643
No 318
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=22.87 E-value=1.3e+02 Score=21.51 Aligned_cols=31 Identities=6% Similarity=-0.016 Sum_probs=23.5
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIS 39 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~ 39 (473)
..|+++|..+ ......+..|.+.|++|..+.
T Consensus 57 ~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~ 87 (103)
T 3eme_A 57 EIYYIVCAGG----VRSAKVVEYLEANGIDAVNVE 87 (103)
T ss_dssp SEEEEECSSS----SHHHHHHHHHHTTTCEEEEET
T ss_pred CeEEEECCCC----hHHHHHHHHHHHCCCCeEEeC
Confidence 4688888644 356778899999999887665
No 319
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=22.84 E-value=1.1e+02 Score=22.45 Aligned_cols=40 Identities=15% Similarity=0.105 Sum_probs=24.4
Q ss_pred HHHHHHHhCCCcEEEEcCCcc--hHHHHHHHc-------CCCeEEEecc
Q 036520 107 PFKQFVAQQSVDWIIVDVMSH--WAGKIAQEY-------HVPLLLFSAF 146 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~--~~~~~A~~l-------giP~v~~~~~ 146 (473)
+..+.+++.+||+||.|.... .+..+++.+ ++|.+.++..
T Consensus 42 ~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 90 (129)
T 1p6q_A 42 QGMKIMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQ 90 (129)
T ss_dssp HHHHHHHTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSC
T ss_pred HHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCC
Confidence 344566777899999996442 455554433 4566655443
No 320
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=22.81 E-value=1.5e+02 Score=22.40 Aligned_cols=40 Identities=20% Similarity=0.219 Sum_probs=25.2
Q ss_pred HHHHHHHhCCCcEEEEcCCcc--hHHHHHH-------HcCCCeEEEecc
Q 036520 107 PFKQFVAQQSVDWIIVDVMSH--WAGKIAQ-------EYHVPLLLFSAF 146 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~--~~~~~A~-------~lgiP~v~~~~~ 146 (473)
+..+.+++.+||+||.|.... .+..+.+ .-++|.+.+...
T Consensus 42 ~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (144)
T 3kht_A 42 KALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDN 90 (144)
T ss_dssp HHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETT
T ss_pred HHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCC
Confidence 344566778999999997542 3444332 235788877654
No 321
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=22.80 E-value=84 Score=23.37 Aligned_cols=39 Identities=13% Similarity=0.064 Sum_probs=27.0
Q ss_pred ccEEEEe--cCCCccChHHHH-HHHHHHHhCCCeEEEEeCCC
Q 036520 4 KLHVVML--PWSAFGHLMPFF-QLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 4 ~~~vl~~--~~~~~gH~~p~l-~la~~L~~~Gh~Vt~~~~~~ 42 (473)
+|+|+.+ |..+-.|.+-.- .|-++-.++||++.+=+...
T Consensus 2 ~mkivaVtaCptGiAhTymAAeaLekaA~~~G~~ikVEtqgs 43 (106)
T 2m1z_A 2 KRKIIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGA 43 (106)
T ss_dssp CCEEEEEEECSSCHHHHHHHHHHHHHHHHHHTCEEEEEEEET
T ss_pred CccEEEEEECCCcHHHHHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 3677766 777788988744 45555556799999877443
No 322
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=22.79 E-value=76 Score=28.93 Aligned_cols=37 Identities=19% Similarity=0.279 Sum_probs=26.4
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCC-------eEEEEeCC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGV-------KVSFISTP 41 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh-------~Vt~~~~~ 41 (473)
|.++|||++. |+.|++-.. ++..|..+|+ +|+++-..
T Consensus 1 m~~~mkVlVt--GaaGfIG~~--l~~~L~~~g~~~~~~~~ev~l~D~~ 44 (327)
T 1y7t_A 1 MKAPVRVAVT--GAAGQIGYS--LLFRIAAGEMLGKDQPVILQLLEIP 44 (327)
T ss_dssp CCCCEEEEES--STTSHHHHH--HHHHHHTTTTTCTTCCEEEEEECCG
T ss_pred CCCCCEEEEE--CCCCHHHHH--HHHHHHhCCCCCCCCCCEEEEEeCC
Confidence 7888997654 556777664 5667888896 88887543
No 323
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=22.79 E-value=77 Score=28.51 Aligned_cols=32 Identities=16% Similarity=0.329 Sum_probs=25.0
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIS 39 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~ 39 (473)
|.+ ||.|+=.+.-| .++|+.|.++||+|+++.
T Consensus 4 Ms~--kIgfIGLG~MG-----~~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 4 MSE--KIAFLGLGNLG-----TPIAEILLEAGYELVVWN 35 (297)
T ss_dssp CCC--EEEEECCSTTH-----HHHHHHHHHTTCEEEEC-
T ss_pred CCC--cEEEEecHHHH-----HHHHHHHHHCCCeEEEEe
Confidence 554 69988776666 478999999999999764
No 324
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=22.70 E-value=82 Score=28.73 Aligned_cols=33 Identities=15% Similarity=0.072 Sum_probs=26.9
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
.+||.|+=.++.| |-.+|+-|.++||+|+..=.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 4588888888777 55799999999999998643
No 325
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=22.69 E-value=62 Score=28.52 Aligned_cols=38 Identities=13% Similarity=0.026 Sum_probs=25.3
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|..++++++++.++. -+- .+++++|+++|++|.++...
T Consensus 1 M~~~~k~vlVTGas~-gIG--~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 1 MSESAKVWLVTGASS-GFG--RAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp ---CCCEEEETTTTS-HHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCcEEEEECCCC-hHH--HHHHHHHHHCCCEEEEEeCC
Confidence 555556777776553 333 47889999999999887643
No 326
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=22.68 E-value=99 Score=27.71 Aligned_cols=34 Identities=9% Similarity=0.187 Sum_probs=25.9
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIS 39 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~ 39 (473)
|-+.|+|+++... .......+.|.+.||+|.+..
T Consensus 4 ~~~~mki~v~~~~-----~~~~~~~~~L~~~g~~v~~~~ 37 (300)
T 2rir_A 4 MLTGLKIAVIGGD-----ARQLEIIRKLTEQQADIYLVG 37 (300)
T ss_dssp CCCSCEEEEESBC-----HHHHHHHHHHHHTTCEEEEES
T ss_pred cccCCEEEEECCC-----HHHHHHHHHHHhCCCEEEEEe
Confidence 5567899888442 466677899999999998763
No 327
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=22.65 E-value=51 Score=29.64 Aligned_cols=31 Identities=19% Similarity=0.311 Sum_probs=23.1
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
++|.|+=.|..|+ .+|..|+++||+|+++..
T Consensus 16 ~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 16 KHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHHH-----HHHHHHHhCCCeEEEEEC
Confidence 3688876555554 578889999999998764
No 328
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=22.60 E-value=47 Score=30.82 Aligned_cols=38 Identities=11% Similarity=0.011 Sum_probs=27.0
Q ss_pred CCCccEEEEecCCCcc-C---hHHHHHHHHHHHhCCCeEEEEe
Q 036520 1 MARKLHVVMLPWSAFG-H---LMPFFQLSIALAKSGVKVSFIS 39 (473)
Q Consensus 1 m~~~~~vl~~~~~~~g-H---~~p~l~la~~L~~~Gh~Vt~~~ 39 (473)
|.+| ||+++..|..+ | +.....+.++|.+.||+|+.+.
T Consensus 1 M~kk-kv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~ 42 (357)
T 4fu0_A 1 MQNK-KIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIG 42 (357)
T ss_dssp -CCE-EEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCC-EEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEE
Confidence 7765 89888665433 3 3455678899988999999774
No 329
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=22.60 E-value=1.1e+02 Score=22.96 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=24.2
Q ss_pred HHHHHHhCCCcEEEEcCCcc--hHHHHHHH-----cCCCeEEEecch
Q 036520 108 FKQFVAQQSVDWIIVDVMSH--WAGKIAQE-----YHVPLLLFSAFS 147 (473)
Q Consensus 108 l~~ll~~~~pD~vI~D~~~~--~~~~~A~~-----lgiP~v~~~~~~ 147 (473)
..+.+++.+||+||.|.... .+..+++. ..+|.+.++...
T Consensus 40 a~~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~ 86 (137)
T 3cfy_A 40 AIQFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHG 86 (137)
T ss_dssp HHHHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSC
T ss_pred HHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecC
Confidence 34455667899999996442 34444433 356777665543
No 330
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=22.50 E-value=1.1e+02 Score=24.55 Aligned_cols=46 Identities=15% Similarity=0.215 Sum_probs=32.3
Q ss_pred HHhhhhhHHHHHHHhCCCcEEEEcCCcc--------------h-HHHHHHHcCCCeEEEec
Q 036520 100 AYDLLQHPFKQFVAQQSVDWIIVDVMSH--------------W-AGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 100 ~~~~~~~~l~~ll~~~~pD~vI~D~~~~--------------~-~~~~A~~lgiP~v~~~~ 145 (473)
......+.+.+++++.+||.+..+..++ + +..++...|||+.-+.+
T Consensus 43 Rl~~i~~~l~~~i~~~~Pd~vaiE~vf~~~n~~s~~~lgqarGv~~~a~~~~~ipv~eytp 103 (158)
T 1hjr_A 43 RLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAA 103 (158)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEeecccccChHHHHHHHHHHHHHHHHHHHcCCCEEEECH
Confidence 3445677788999999999888774321 1 13467788999887755
No 331
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=22.49 E-value=1.1e+02 Score=23.11 Aligned_cols=37 Identities=11% Similarity=0.146 Sum_probs=23.1
Q ss_pred HHHHHhCCCcEEEEcCCc--chHHHHHHH-----cCCCeEEEec
Q 036520 109 KQFVAQQSVDWIIVDVMS--HWAGKIAQE-----YHVPLLLFSA 145 (473)
Q Consensus 109 ~~ll~~~~pD~vI~D~~~--~~~~~~A~~-----lgiP~v~~~~ 145 (473)
.+.+++.+||+||.|... ..+..+++. -++|.+.++.
T Consensus 42 l~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~ 85 (141)
T 3cu5_A 42 IQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSG 85 (141)
T ss_dssp HHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECC
T ss_pred HHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeC
Confidence 445566789999999644 245544433 2567776644
No 332
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=22.41 E-value=38 Score=30.44 Aligned_cols=40 Identities=10% Similarity=0.078 Sum_probs=30.3
Q ss_pred CccEEEEecCCCcc----ChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 3 RKLHVVMLPWSAFG----HLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 3 ~~~~vl~~~~~~~g----H~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
.+|||+++..+..+ -+.....++++|.++||+|..+....
T Consensus 2 ~~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~ 45 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNE 45 (307)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSS
T ss_pred CCcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccC
Confidence 47899998876432 24556788999999999999887654
No 333
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=22.37 E-value=66 Score=27.00 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=23.7
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|||++. |+.|.+- ..++++|.++||+|+.+.-.
T Consensus 1 MkilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVL--GATGRAG--SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEec
Confidence 565443 4555554 57889999999999998754
No 334
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=22.37 E-value=1e+02 Score=26.02 Aligned_cols=37 Identities=14% Similarity=0.103 Sum_probs=23.4
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
|....+.++++.+ .|-+- ..+++.|+++||+|+++..
T Consensus 1 M~~~~k~vlVtGa-sggiG--~~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 1 MEGMKGAVLITGA-SRGIG--EATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp ---CCCEEEESST-TSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCEEEEECC-CcHHH--HHHHHHHHHCCCEEEEEEC
Confidence 5443345555554 34333 5789999999999998764
No 335
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=22.35 E-value=91 Score=27.63 Aligned_cols=45 Identities=13% Similarity=0.163 Sum_probs=34.2
Q ss_pred CccEEEEecCCCc---cChHHHHHHHHHHHhCCCeEEEEeCCCccccC
Q 036520 3 RKLHVVMLPWSAF---GHLMPFFQLSIALAKSGVKVSFISTPKNIQRL 47 (473)
Q Consensus 3 ~~~~vl~~~~~~~---gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~ 47 (473)
.+||.+|++.+-- |-=.-...++.-|..||++||..=-+.+...-
T Consensus 21 ~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlNvD 68 (295)
T 2vo1_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINID 68 (295)
T ss_dssp CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSCCC
T ss_pred ccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccceecC
Confidence 3578999888633 55567889999999999999998655554433
No 336
>1q5z_A SIPA, SIPA; cell invasion; 1.80A {Salmonella typhimurium} SCOP: a.196.1.1
Probab=22.35 E-value=1.5e+02 Score=22.41 Aligned_cols=51 Identities=2% Similarity=0.065 Sum_probs=38.2
Q ss_pred CcCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHh
Q 036520 416 SFTRDGIAKALRLATVSEEGEKLRVRAREAANTFNDKKLHDDYSVRFVEYLKIN 469 (473)
Q Consensus 416 ~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (473)
.+..+.|...+.++-. +++.+.+...+++.+...|..++.++.-.++..+.
T Consensus 87 ~iks~alkaqcsdi~~---~~elk~kidtlke~it~hpqkeklaevalqf~rea 137 (177)
T 1q5z_A 87 TIKSAALKAQCSDIDK---HPELKAKMETLKEVITHHPQKEKLAEIALQFAREA 137 (177)
T ss_dssp HHHHHHHHHHHTTGGG---CHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhhhccc---CHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHh
Confidence 5667777777777766 78999999999999887887777666555555543
No 337
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=22.29 E-value=49 Score=30.67 Aligned_cols=36 Identities=25% Similarity=0.391 Sum_probs=27.0
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|....+|+|+=.+..| +.+|..|+++|++|+++-..
T Consensus 2 m~~~~dVvIIGgGi~G-----l~~A~~La~~G~~V~lle~~ 37 (382)
T 1y56_B 2 LPEKSEIVVIGGGIVG-----VTIAHELAKRGEEVTVIEKR 37 (382)
T ss_dssp CCSBCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCCcCCEEEECCCHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 4445678887665445 77899999999999998754
No 338
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=22.15 E-value=1.1e+02 Score=25.24 Aligned_cols=34 Identities=15% Similarity=0.097 Sum_probs=27.4
Q ss_pred EEEEecCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 036520 6 HVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIS 39 (473)
Q Consensus 6 ~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~ 39 (473)
.++++..+..|.......+++.|+++|+.|..+-
T Consensus 29 p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 62 (236)
T 1zi8_A 29 PVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPD 62 (236)
T ss_dssp EEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecc
Confidence 4666666777777788999999999999887765
No 339
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=22.02 E-value=77 Score=30.84 Aligned_cols=36 Identities=14% Similarity=0.094 Sum_probs=28.0
Q ss_pred CCccEEEEecCCCccChHHHHHHHHHHHhC-CC-eEEEEeCCC
Q 036520 2 ARKLHVVMLPWSAFGHLMPFFQLSIALAKS-GV-KVSFISTPK 42 (473)
Q Consensus 2 ~~~~~vl~~~~~~~gH~~p~l~la~~L~~~-Gh-~Vt~~~~~~ 42 (473)
.+.|+|.|+=.|..| .++|..|+++ || +|+++....
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECCh
Confidence 445789988666666 5789999999 99 999886543
No 340
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=22.02 E-value=61 Score=31.27 Aligned_cols=32 Identities=22% Similarity=0.331 Sum_probs=24.3
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|||.|+=.|..| ..+|..|+++||+|+++...
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECC
Confidence 788888443333 57899999999999988654
No 341
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=21.97 E-value=79 Score=28.54 Aligned_cols=33 Identities=27% Similarity=0.385 Sum_probs=24.3
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
+.|+|.|+=.|..| ..+|+.|+++||+|+++..
T Consensus 20 ~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 20 HMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 34788888444333 5688999999999998754
No 342
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=21.92 E-value=68 Score=31.65 Aligned_cols=33 Identities=21% Similarity=0.443 Sum_probs=25.6
Q ss_pred HHHHHHhCCCcEEEEcCCcchHHHHHHHc-------CCCeEEE
Q 036520 108 FKQFVAQQSVDWIIVDVMSHWAGKIAQEY-------HVPLLLF 143 (473)
Q Consensus 108 l~~ll~~~~pD~vI~D~~~~~~~~~A~~l-------giP~v~~ 143 (473)
+.+++++.+||++|.+.. +..+|+++ |||++.+
T Consensus 426 l~~~i~~~~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 426 FRSLMFTRQPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHHCCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHhhcCCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 456667778999999853 46678888 9999865
No 343
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=21.86 E-value=1.6e+02 Score=21.66 Aligned_cols=39 Identities=8% Similarity=-0.025 Sum_probs=23.0
Q ss_pred HHHHHHhCCCcEEEEcCCcc--hHHHHHHHc------CCCeEEEecc
Q 036520 108 FKQFVAQQSVDWIIVDVMSH--WAGKIAQEY------HVPLLLFSAF 146 (473)
Q Consensus 108 l~~ll~~~~pD~vI~D~~~~--~~~~~A~~l------giP~v~~~~~ 146 (473)
..+.+++.+||+||.|.... .+..+.+.+ ..|.+.+.+.
T Consensus 42 a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~ 88 (132)
T 3lte_A 42 AGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSG 88 (132)
T ss_dssp HHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECC
T ss_pred HHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeC
Confidence 34556778999999997542 344444322 3455555443
No 344
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=21.65 E-value=92 Score=25.86 Aligned_cols=37 Identities=24% Similarity=0.392 Sum_probs=27.8
Q ss_pred EEEEecCCCc---cChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 6 HVVMLPWSAF---GHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 6 ~vl~~~~~~~---gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
+|+++|.-+- ---.+...|++.|.++|.+|.|+.+|-
T Consensus 48 ~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 48 KVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp EEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 5777775322 223478899999999999999999654
No 345
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=21.63 E-value=61 Score=28.47 Aligned_cols=31 Identities=19% Similarity=0.208 Sum_probs=24.5
Q ss_pred EEecCCCccChHHHHHHHHHHHhCCCeEEEE
Q 036520 8 VMLPWSAFGHLMPFFQLSIALAKSGVKVSFI 38 (473)
Q Consensus 8 l~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~ 38 (473)
+++..|..|+-.-+..+++.|+++|++|..+
T Consensus 54 VlllHG~~~s~~~~~~la~~La~~Gy~Via~ 84 (281)
T 4fbl_A 54 VLVSHGFTGSPQSMRFLAEGFARAGYTVATP 84 (281)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEEEC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 3445676778778889999999999998653
No 346
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=21.62 E-value=84 Score=27.01 Aligned_cols=36 Identities=8% Similarity=0.007 Sum_probs=23.2
Q ss_pred HHHHhCCCcEEEEcCC--cchHHHHHHHcCCCeEEEec
Q 036520 110 QFVAQQSVDWIIVDVM--SHWAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 110 ~ll~~~~pD~vI~D~~--~~~~~~~A~~lgiP~v~~~~ 145 (473)
+.|.+.+||+||.... ......--++.|||++.+..
T Consensus 51 E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~ 88 (245)
T 1n2z_A 51 ERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDA 88 (245)
T ss_dssp HHHHHTCCSEEEECTTTSCHHHHHHHHHHTCCEEECCC
T ss_pred HHHhccCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCC
Confidence 4445679999998532 22233445678999987643
No 347
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=21.61 E-value=77 Score=28.16 Aligned_cols=35 Identities=23% Similarity=0.240 Sum_probs=25.0
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
|...++|.|+=.+..| ..+|..|+++||+|+++..
T Consensus 1 Mm~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 1 MTGITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CCSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 5455689888443333 4688999999999998753
No 348
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=21.57 E-value=1.2e+02 Score=27.75 Aligned_cols=30 Identities=10% Similarity=-0.007 Sum_probs=24.8
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEEcCCCCC
Q 036520 296 LSKDQVYEIAYGLELSGLPFLWALRKPEWA 325 (473)
Q Consensus 296 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 325 (473)
.+.++...+-+++.....+.||...++...
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~ 91 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGGFNS 91 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSCG
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCchhH
Confidence 356788889999999999999999887554
No 349
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=21.52 E-value=96 Score=30.99 Aligned_cols=39 Identities=8% Similarity=-0.060 Sum_probs=35.3
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
+.+|++.+.++-.|-....-++..|..+|++|..+....
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~v 136 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMV 136 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSB
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCC
Confidence 568999999999999999999999999999999887543
No 350
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=21.51 E-value=85 Score=28.16 Aligned_cols=33 Identities=9% Similarity=0.056 Sum_probs=23.8
Q ss_pred cEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 5 LHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 5 ~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|+|++. |+.|.+-. .++++|.++||+|+.++..
T Consensus 5 ~~ilVt--GatG~iG~--~l~~~L~~~g~~V~~~~R~ 37 (321)
T 3c1o_A 5 EKIIIY--GGTGYIGK--FMVRASLSFSHPTFIYARP 37 (321)
T ss_dssp CCEEEE--TTTSTTHH--HHHHHHHHTTCCEEEEECC
T ss_pred cEEEEE--cCCchhHH--HHHHHHHhCCCcEEEEECC
Confidence 445543 55666654 6789999999999998754
No 351
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=21.43 E-value=1.4e+02 Score=27.01 Aligned_cols=32 Identities=9% Similarity=0.298 Sum_probs=26.1
Q ss_pred ccCCHHHHHHHHHHHhcCCCCEEEEEcCCCCC
Q 036520 294 CKLSKDQVYEIAYGLELSGLPFLWALRKPEWA 325 (473)
Q Consensus 294 ~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 325 (473)
...+.++...+-+++.....+.||..+++...
T Consensus 62 agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga 93 (311)
T 1zl0_A 62 AGTVEQRLEDLHNAFDMPDITAVWCLRGGYGC 93 (311)
T ss_dssp SSCHHHHHHHHHHHHHSTTEEEEEESCCSSCG
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEccCCcCH
Confidence 33467888889999999999999999987543
No 352
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=21.36 E-value=77 Score=28.07 Aligned_cols=33 Identities=12% Similarity=0.005 Sum_probs=26.6
Q ss_pred cEEEEecCCCc--cChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 5 LHVVMLPWSAF--GHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 5 ~~vl~~~~~~~--gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
.+|++++.++. |+ -+.+|+.|+.+|++|+++..
T Consensus 80 ~~VlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~ 114 (265)
T 2o8n_A 80 PTVLVICGPGNNGGD---GLVCARHLKLFGYQPTIYYP 114 (265)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEe
Confidence 38999998765 43 37899999999999998764
No 353
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=21.36 E-value=1.6e+02 Score=22.05 Aligned_cols=28 Identities=18% Similarity=0.057 Sum_probs=18.1
Q ss_pred HHHHHHHhCCCcEEEEcCCcc--hHHHHHH
Q 036520 107 PFKQFVAQQSVDWIIVDVMSH--WAGKIAQ 134 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~--~~~~~A~ 134 (473)
+..+.+++.+||+||.|.... .+..+++
T Consensus 45 ~al~~l~~~~~dlvllD~~lp~~~g~~~~~ 74 (140)
T 3c97_A 45 QALQAYQNRQFDVIIMDIQMPVMDGLEAVS 74 (140)
T ss_dssp HHHHHHHHSCCSEEEECTTCCSSCHHHHHH
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCcHHHHHH
Confidence 344556677899999997442 4554444
No 354
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=21.22 E-value=94 Score=25.87 Aligned_cols=37 Identities=24% Similarity=0.350 Sum_probs=27.8
Q ss_pred EEEEecCCCc---cChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 6 HVVMLPWSAF---GHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 6 ~vl~~~~~~~---gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
+|+++|.-+- ---.+...|++.|.++|.+|.|+..|-
T Consensus 47 ~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 47 SIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp EEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred eEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 5777775322 223478899999999999999999654
No 355
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=21.17 E-value=57 Score=30.55 Aligned_cols=41 Identities=22% Similarity=0.164 Sum_probs=29.3
Q ss_pred CCCccEEEEecCCCccC----hHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 1 MARKLHVVMLPWSAFGH----LMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH----~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|.+||||+++..|..+- +.....+.++|.+.||+|+.+...
T Consensus 1 ~~~~~~v~vl~GG~S~E~evSl~Sa~~v~~~l~~~~~~v~~i~i~ 45 (372)
T 3tqt_A 1 MAEKLHISVLCGGQSTEHEISIQSAKNIVNTLDAAKYLISVIFID 45 (372)
T ss_dssp -CCSEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCCCCEEEEEeccCCCccHhHHHHHHHHHHHHhhcCceEEEEEEC
Confidence 88899999998875543 334556677777779999977643
No 356
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=21.11 E-value=53 Score=29.59 Aligned_cols=33 Identities=12% Similarity=0.192 Sum_probs=24.4
Q ss_pred CccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 3 RKLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
++|+|.|+=.+..| ..+|+.|+++||+|+++..
T Consensus 6 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 45789988544434 4678999999999998854
No 357
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=21.00 E-value=84 Score=28.47 Aligned_cols=36 Identities=14% Similarity=0.116 Sum_probs=24.1
Q ss_pred HHHHhCCCcEEEEcCCcc-hHHHHHHHcCCCeEEEec
Q 036520 110 QFVAQQSVDWIIVDVMSH-WAGKIAQEYHVPLLLFSA 145 (473)
Q Consensus 110 ~ll~~~~pD~vI~D~~~~-~~~~~A~~lgiP~v~~~~ 145 (473)
+.|.+.+||+||...... ....--++.|||++.+..
T Consensus 78 E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~ 114 (326)
T 3psh_A 78 ESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISL 114 (326)
T ss_dssp HHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECS
T ss_pred HHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEec
Confidence 445567999999875432 233444678999998744
No 358
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=21.00 E-value=60 Score=27.90 Aligned_cols=39 Identities=10% Similarity=0.066 Sum_probs=24.8
Q ss_pred HHHHHHHhC--CCcEEEEcCCcch---H----HHHHHHcCCCeEEEec
Q 036520 107 PFKQFVAQQ--SVDWIIVDVMSHW---A----GKIAQEYHVPLLLFSA 145 (473)
Q Consensus 107 ~l~~ll~~~--~pD~vI~D~~~~~---~----~~~A~~lgiP~v~~~~ 145 (473)
.+.+++++. +||+|++|..... . .-+...+|+|+|.+.=
T Consensus 92 ~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK 139 (225)
T 2w36_A 92 LFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAK 139 (225)
T ss_dssp HHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEES
T ss_pred HHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEe
Confidence 344444443 7999999975432 2 2345667999998743
No 359
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=20.99 E-value=1.3e+02 Score=25.34 Aligned_cols=41 Identities=15% Similarity=0.203 Sum_probs=26.2
Q ss_pred CCCccEEEEecCCCccChHH----HHHHHHHHHhCCCeEEEEeCC
Q 036520 1 MARKLHVVMLPWSAFGHLMP----FFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p----~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
|.++...+++..+..|.-.- +..+++.|.++|++|.++..+
T Consensus 1 ~~~~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p 45 (243)
T 1ycd_A 1 MTVQIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAP 45 (243)
T ss_dssp --CCCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCS
T ss_pred CCCcCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCC
Confidence 55554445555555555443 347899999889999887755
No 360
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=20.75 E-value=1.2e+02 Score=27.78 Aligned_cols=30 Identities=3% Similarity=-0.067 Sum_probs=25.0
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEEcCCCCC
Q 036520 296 LSKDQVYEIAYGLELSGLPFLWALRKPEWA 325 (473)
Q Consensus 296 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 325 (473)
.+.++...+-+++.....+.||..+++...
T Consensus 63 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~ 92 (336)
T 3sr3_A 63 SIQERAKELNALIRNPNVSCIMSTIGGMNS 92 (336)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSCG
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccccH
Confidence 456788889999999999999999987554
No 361
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=20.71 E-value=85 Score=30.39 Aligned_cols=35 Identities=11% Similarity=0.128 Sum_probs=26.0
Q ss_pred CCCccEEEEecCCCccChHHHHHHHHHHHhC--CCeEEEEeC
Q 036520 1 MARKLHVVMLPWSAFGHLMPFFQLSIALAKS--GVKVSFIST 40 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~ 40 (473)
|.+.|+|.|+=.|..| ..+|..|+++ ||+|+++..
T Consensus 2 M~~~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~d~ 38 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVVDV 38 (467)
T ss_dssp CCCCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECS
T ss_pred CCCccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEEC
Confidence 6666899988544444 4678888888 899998854
No 362
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=20.71 E-value=1.4e+02 Score=21.09 Aligned_cols=40 Identities=18% Similarity=0.020 Sum_probs=24.5
Q ss_pred HHHHHHHhCCCcEEEEcCCcc--hHHHHHHH-------cCCCeEEEecc
Q 036520 107 PFKQFVAQQSVDWIIVDVMSH--WAGKIAQE-------YHVPLLLFSAF 146 (473)
Q Consensus 107 ~l~~ll~~~~pD~vI~D~~~~--~~~~~A~~-------lgiP~v~~~~~ 146 (473)
...+.+++.+||+||.|.... .+..+.+. -++|.+.+...
T Consensus 36 ~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~ 84 (119)
T 2j48_A 36 TALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGE 84 (119)
T ss_dssp HHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESS
T ss_pred HHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCC
Confidence 344555667899999996432 33333322 46888877653
No 363
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=20.59 E-value=95 Score=28.07 Aligned_cols=40 Identities=10% Similarity=0.148 Sum_probs=28.2
Q ss_pred CCCccEEEEecCCCccChHH-HHHHHHHHHhCCCeEEEEeC
Q 036520 1 MARKLHVVMLPWSAFGHLMP-FFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 1 m~~~~~vl~~~~~~~gH~~p-~l~la~~L~~~Gh~Vt~~~~ 40 (473)
|...+||+++.-+..++... ...+.+.|.++|++|.+..+
T Consensus 1 m~~m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~ 41 (307)
T 1u0t_A 1 MTAHRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSA 41 (307)
T ss_dssp ----CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-
T ss_pred CCCCCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 55555899999888877554 67788899999999887543
No 364
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=20.57 E-value=55 Score=28.01 Aligned_cols=19 Identities=21% Similarity=0.366 Sum_probs=16.7
Q ss_pred HHHHHHHHhCCCeEEEEeC
Q 036520 22 FQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 22 l~la~~L~~~Gh~Vt~~~~ 40 (473)
+.+|..|+++|++|+++=-
T Consensus 15 L~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp HHHHHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHCCCCEEEEEC
Confidence 7889999999999999853
No 365
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=20.53 E-value=2.3e+02 Score=21.15 Aligned_cols=41 Identities=7% Similarity=0.033 Sum_probs=28.8
Q ss_pred EEecCCCccCh--HHHHHHHHHHHhCCCeEEEEeCCCccccCC
Q 036520 8 VMLPWSAFGHL--MPFFQLSIALAKSGVKVSFISTPKNIQRLP 48 (473)
Q Consensus 8 l~~~~~~~gH~--~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~ 48 (473)
+++..+-+|+- .-.+.+|.++...||+|.++-..+..-...
T Consensus 6 ~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DGV~~~~ 48 (119)
T 2d1p_B 6 FVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGVFQLL 48 (119)
T ss_dssp EEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGGGGGGC
T ss_pred EEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHHHHHHh
Confidence 33444555665 667899999999999999877666554443
No 366
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=20.53 E-value=1.5e+02 Score=21.60 Aligned_cols=39 Identities=13% Similarity=0.101 Sum_probs=24.4
Q ss_pred HHHHHHhCCCcEEEEcCCcc--hHHHHHHHc-------CCCeEEEecc
Q 036520 108 FKQFVAQQSVDWIIVDVMSH--WAGKIAQEY-------HVPLLLFSAF 146 (473)
Q Consensus 108 l~~ll~~~~pD~vI~D~~~~--~~~~~A~~l-------giP~v~~~~~ 146 (473)
..+.+++.+||+||.|.... .+..+++.+ .+|.+.++..
T Consensus 41 a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~ 88 (128)
T 1jbe_A 41 ALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAE 88 (128)
T ss_dssp HHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESS
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecC
Confidence 34556677899999997542 455444432 4677766554
No 367
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=20.49 E-value=1.6e+02 Score=24.63 Aligned_cols=38 Identities=13% Similarity=-0.055 Sum_probs=26.4
Q ss_pred ccEEEEecCCCc---cChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 4 KLHVVMLPWSAF---GHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 4 ~~~vl~~~~~~~---gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
.++|.+++.... -+..-...|++.|+++|+.|..-..+
T Consensus 22 ~~~v~Vfggs~~~~~~~~~~A~~lg~~La~~g~~lV~GGG~ 62 (199)
T 3qua_A 22 QWAVCVYCASGPTHPELLELAAEVGSSIAARGWTLVSGGGN 62 (199)
T ss_dssp CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 357888876541 22456788999999999987665433
No 368
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=20.43 E-value=72 Score=27.72 Aligned_cols=39 Identities=21% Similarity=0.288 Sum_probs=30.0
Q ss_pred ccEEEEecC--CCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 4 KLHVVMLPW--SAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 4 ~~~vl~~~~--~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
+|+++.+.. ++-|=..-...||..|+++|++|.++-.+.
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 466655543 456778889999999999999999986543
No 369
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=20.38 E-value=83 Score=24.33 Aligned_cols=58 Identities=14% Similarity=0.104 Sum_probs=36.3
Q ss_pred hCCceeccccccccccceeeeeecceEEEEecCCCCCcCHHHHHHHHHHHhcCcchHHHHHHHHHH
Q 036520 380 FGHSLVVLPLIIDQPLNARLLVDKDLAVQVERKDDGSFTRDGIAKALRLATVSEEGEKLRVRAREA 445 (473)
Q Consensus 380 ~GvP~l~~P~~~DQ~~na~~v~~~G~G~~l~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~a~~~ 445 (473)
..+|+|++--..+ ......+.+.|+--.+.+ .++.++|.++|++++. ....+...+++
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~g~~~~l~k----P~~~~~L~~~i~~~~~---~~~~~~~~~~~ 131 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQDGAYDFIAK----PFAADRLVQSARRAEE---KRRLVMENRSL 131 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHHTTCCEEEES----SCCHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHhcCCCeEEeC----CCCHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 4678877754433 233344445676555554 5799999999999998 44444433333
No 370
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=20.37 E-value=97 Score=27.35 Aligned_cols=40 Identities=15% Similarity=0.218 Sum_probs=31.3
Q ss_pred CccEEEEecC--CCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 3 RKLHVVMLPW--SAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 3 ~~~~vl~~~~--~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
+++++++++. ++-|=..-...||..|+++|.+|.++-.+.
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~ 121 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDM 121 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 4566666654 566888889999999999999999986553
No 371
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=20.36 E-value=85 Score=26.39 Aligned_cols=32 Identities=9% Similarity=0.302 Sum_probs=22.9
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
.|+|.|+=.+..| ..+|..|+++||+|+++..
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 4678877544333 5678899999999998854
No 372
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=20.34 E-value=57 Score=30.33 Aligned_cols=39 Identities=15% Similarity=0.071 Sum_probs=28.3
Q ss_pred CCccEEEEecCCCccCh----HHHHHHHHHHHhCCCeEEEEeC
Q 036520 2 ARKLHVVMLPWSAFGHL----MPFFQLSIALAKSGVKVSFIST 40 (473)
Q Consensus 2 ~~~~~vl~~~~~~~gH~----~p~l~la~~L~~~Gh~Vt~~~~ 40 (473)
.+||||+++..|..+-- .....++++|.+.||+|+.+..
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i 43 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGI 43 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEE
Confidence 04679999888755443 3455788888888999998764
No 373
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=20.34 E-value=1.2e+02 Score=23.20 Aligned_cols=42 Identities=17% Similarity=0.162 Sum_probs=26.0
Q ss_pred hHHHHHHHhCCCcEEEEcCCc--chHHHHHHH-----cCCCeEEEecch
Q 036520 106 HPFKQFVAQQSVDWIIVDVMS--HWAGKIAQE-----YHVPLLLFSAFS 147 (473)
Q Consensus 106 ~~l~~ll~~~~pD~vI~D~~~--~~~~~~A~~-----lgiP~v~~~~~~ 147 (473)
.+..+.+++.+||+||.|... ..+..+.+. -++|.+.++...
T Consensus 51 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 99 (152)
T 3eul_A 51 AAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHD 99 (152)
T ss_dssp HHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccC
Confidence 345566777899999999643 234444332 357777765543
No 374
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=20.17 E-value=1.4e+02 Score=25.16 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=26.2
Q ss_pred EEEEecCCCccC--hHHHHHHHHHHHhCCCeEEEEe
Q 036520 6 HVVMLPWSAFGH--LMPFFQLSIALAKSGVKVSFIS 39 (473)
Q Consensus 6 ~vl~~~~~~~gH--~~p~l~la~~L~~~Gh~Vt~~~ 39 (473)
..+++..+..|+ ..-...+++.|.++|++|..+-
T Consensus 28 p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D 63 (251)
T 2wtm_A 28 PLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRAD 63 (251)
T ss_dssp EEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEec
Confidence 456666777777 6677889999999999987654
No 375
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=20.15 E-value=1e+02 Score=29.67 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=25.6
Q ss_pred CCCcc--EEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCCC
Q 036520 1 MARKL--HVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTPK 42 (473)
Q Consensus 1 m~~~~--~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 42 (473)
|+.+| +||++-. |. -.+.+++++.+.|++|..+.+..
T Consensus 1 m~~~~~k~ILI~g~---g~--~~~~i~~a~~~~G~~vv~v~~~~ 39 (461)
T 2dzd_A 1 METRRIRKVLVANR---GE--IAIRVFRACTELGIRTVAIYSKE 39 (461)
T ss_dssp --CCCCSEEEECSC---HH--HHHHHHHHHHHHTCEEEEEECGG
T ss_pred CCCCcCcEEEEECC---cH--HHHHHHHHHHHcCCEEEEEECCc
Confidence 66665 7888732 32 35788999999999999887543
No 376
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=20.15 E-value=1e+02 Score=27.26 Aligned_cols=35 Identities=17% Similarity=-0.117 Sum_probs=23.5
Q ss_pred HHHHhCCCcEEEEcCCc--chHHHHHHHcCCCeEEEe
Q 036520 110 QFVAQQSVDWIIVDVMS--HWAGKIAQEYHVPLLLFS 144 (473)
Q Consensus 110 ~ll~~~~pD~vI~D~~~--~~~~~~A~~lgiP~v~~~ 144 (473)
+.|.+.+||+||+.... .....--++.|||++.+.
T Consensus 53 E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (283)
T 2r79_A 53 EGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLS 89 (283)
T ss_dssp HHHHTTCCSEEEECTTCCCHHHHHHHHHTTCCEEECC
T ss_pred HHHHhcCCCEEEEeCccCcHHHHHHHHHcCCcEEEec
Confidence 34566799999987532 223344567899988763
No 377
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=20.14 E-value=59 Score=30.21 Aligned_cols=33 Identities=30% Similarity=0.432 Sum_probs=26.1
Q ss_pred ccEEEEecCCCccChHHHHHHHHHHHhCCCeEEEEeCC
Q 036520 4 KLHVVMLPWSAFGHLMPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 4 ~~~vl~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
+|||.|+=.|..| ..+|..|+++||+|++....
T Consensus 29 ~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 5789888766655 35889999999999998764
No 378
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=20.08 E-value=58 Score=30.63 Aligned_cols=39 Identities=15% Similarity=0.047 Sum_probs=28.6
Q ss_pred CccEEEEecCCCccCh----HHHHHHHHHHHhCCCeEEEEeCC
Q 036520 3 RKLHVVMLPWSAFGHL----MPFFQLSIALAKSGVKVSFISTP 41 (473)
Q Consensus 3 ~~~~vl~~~~~~~gH~----~p~l~la~~L~~~Gh~Vt~~~~~ 41 (473)
++|||+++..|..+-- .....++++|.+.||+|+.+...
T Consensus 21 ~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 21 RKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 4679999888755443 34557888888889999987643
Done!