Query 036522
Match_columns 70
No_of_seqs 53 out of 55
Neff 2.8
Searched_HMMs 13730
Date Mon Mar 25 04:05:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036522.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036522hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1yqfa1 d.25.1.1 (A:14-195) Hy 32.2 20 0.0014 22.2 3.2 38 15-52 5-48 (182)
2 d2fdbp2 b.1.1.4 (P:2252-2360) 28.0 15 0.0011 19.0 1.8 34 30-67 3-38 (109)
3 d1z21a1 a.243.1.2 (A:42-145) Y 24.1 10 0.00075 23.4 0.6 15 11-25 87-101 (104)
4 d1oj4a2 d.58.26.5 (A:164-283) 23.2 15 0.0011 21.2 1.2 14 56-69 72-85 (120)
5 d1ik6a2 c.48.1.2 (A:192-326) E 19.4 19 0.0014 20.8 1.2 19 34-52 4-22 (135)
6 d2p92a1 d.64.2.1 (A:1-106) Hyp 18.3 12 0.00085 21.8 -0.0 15 34-48 18-32 (106)
7 d2idla1 d.64.2.1 (A:1-112) Hyp 14.9 14 0.001 21.7 -0.3 15 34-48 18-32 (112)
8 d1qs0b2 c.48.1.2 (B:206-339) 2 14.6 29 0.0021 20.4 1.2 19 34-52 4-22 (134)
9 d1y14b2 d.230.1.1 (B:1-80) N-t 14.6 74 0.0054 17.0 2.9 44 15-68 21-72 (80)
10 d3c9ua2 d.139.1.1 (A:138-300) 14.6 28 0.0021 21.0 1.1 9 45-53 122-130 (163)
No 1
>d1yqfa1 d.25.1.1 (A:14-195) Hypothetical protein Lmaj011689 {Leishmania major [TaxId: 5664]}
Probab=32.18 E-value=20 Score=22.19 Aligned_cols=38 Identities=29% Similarity=0.350 Sum_probs=23.8
Q ss_pred cHHHHHhHHhhhhhh-----cCcchhhhhhhccccCCc-eEEee
Q 036522 15 PLAALISREMRNEKM-----EKPNVSFGQAAQSRKGED-YFLIK 52 (70)
Q Consensus 15 pLa~Ll~rEl~~e~~-----ErP~v~~Gqa~qsKKgED-f~Llk 52 (70)
.|+.+|++|++.|+. ++|..--|=.-..+.|+. ++|-|
T Consensus 5 ~L~~~l~~Ei~~E~~~~~~~~~p~~~~gf~i~d~~g~~~v~L~r 48 (182)
T d1yqfa1 5 ALADATRRELEEEMGRSDKPEQPTPPAGWQVVRKPGTCTFDLTK 48 (182)
T ss_dssp HHHHHHHHHHHHHHTCSSCCCCCCCCTTCEEEECTTSSEEEEEE
T ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCCCEEEEcCCceEEEEEE
Confidence 588999999999874 445433344444455664 44444
No 2
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor, FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Probab=28.01 E-value=15 Score=19.03 Aligned_cols=34 Identities=21% Similarity=0.370 Sum_probs=24.3
Q ss_pred cCcchhhh--hhhccccCCceEEeecCCccccCCCCCcee
Q 036522 30 EKPNVSFG--QAAQSRKGEDYFLIKTDCQRVPGNPSSTFS 67 (70)
Q Consensus 30 ErP~v~~G--qa~qsKKgEDf~Llk~dC~Rvpgd~sstfs 67 (70)
.||.|..| +....+.||+..| .| ++-|+|..++.
T Consensus 3 ~~P~i~~~~P~~~tv~~G~~v~l---~C-~v~g~P~p~v~ 38 (109)
T d2fdbp2 3 HRPILQAGLPANASTVVGGDVEF---VC-KVYSDAQPHIQ 38 (109)
T ss_dssp SCCEECTTCSCCEEECTTCCEEE---EE-EEECSSCCEEE
T ss_pred CCCEEcCCCCCCEEEecCCcEEE---EE-EEEEcCCCeEE
Confidence 57888877 4567889999887 46 46788766553
No 3
>d1z21a1 a.243.1.2 (A:42-145) Yop proteins translocation protein H, YscH (IcrP) {Yersinia pestis [TaxId: 632]}
Probab=24.12 E-value=10 Score=23.40 Aligned_cols=15 Identities=33% Similarity=0.414 Sum_probs=11.7
Q ss_pred CCcccHHHHHhHHhh
Q 036522 11 HDLVPLAALISREMR 25 (70)
Q Consensus 11 ~~~VpLa~Ll~rEl~ 25 (70)
.+..+|+.|++|||.
T Consensus 87 ~~~~yL~dLiR~EL~ 101 (104)
T d1z21a1 87 VGLPYLSELINKELM 101 (104)
T ss_dssp --CHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHH
Confidence 366889999999986
No 4
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=23.22 E-value=15 Score=21.21 Aligned_cols=14 Identities=29% Similarity=0.636 Sum_probs=12.6
Q ss_pred ccccCCCCCceeee
Q 036522 56 QRVPGNPSSTFSVF 69 (70)
Q Consensus 56 ~Rvpgd~sstfsvF 69 (70)
-|+-|.|||-|++|
T Consensus 72 ~~MSGSGstvF~~f 85 (120)
T d1oj4a2 72 SRLTGTGACVFAEF 85 (120)
T ss_dssp EEECTTSSCEEEEE
T ss_pred ceecCCCCEEEEEe
Confidence 47899999999998
No 5
>d1ik6a2 c.48.1.2 (A:192-326) E1-beta subunit of pyruvate dehydrogenase, C-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=19.36 E-value=19 Score=20.81 Aligned_cols=19 Identities=37% Similarity=0.665 Sum_probs=16.1
Q ss_pred hhhhhhhccccCCceEEee
Q 036522 34 VSFGQAAQSRKGEDYFLIK 52 (70)
Q Consensus 34 v~~Gqa~qsKKgEDf~Llk 52 (70)
+-+|++-.-|+|+|-+++=
T Consensus 4 ~~~Gk~~ilr~G~dvtIi~ 22 (135)
T d1ik6a2 4 VEIGKARVAREGDDVTLVT 22 (135)
T ss_dssp CCTTCCEEEECCSSEEEEE
T ss_pred eeCCEEEEEEeCCcEEEEE
Confidence 5679999999999998874
No 6
>d2p92a1 d.64.2.1 (A:1-106) Hypothetical protein SAV1646 {Staphylococcus aureus [TaxId: 1280]}
Probab=18.34 E-value=12 Score=21.82 Aligned_cols=15 Identities=27% Similarity=0.401 Sum_probs=3.0
Q ss_pred hhhhhhhccccCCce
Q 036522 34 VSFGQAAQSRKGEDY 48 (70)
Q Consensus 34 v~~Gqa~qsKKgEDf 48 (70)
..-|||+.+.+|+|-
T Consensus 18 ~v~GHA~~a~~G~DI 32 (106)
T d2p92a1 18 IMDGHADHGEYGHDI 32 (106)
T ss_dssp EEEC----------C
T ss_pred EEEecCCCCCCCCcE
Confidence 456999999999994
No 7
>d2idla1 d.64.2.1 (A:1-112) Hypothetical protein SP1106 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=14.86 E-value=14 Score=21.68 Aligned_cols=15 Identities=27% Similarity=0.237 Sum_probs=12.4
Q ss_pred hhhhhhhccccCCce
Q 036522 34 VSFGQAAQSRKGEDY 48 (70)
Q Consensus 34 v~~Gqa~qsKKgEDf 48 (70)
..-|||+.+.+|+|-
T Consensus 18 ~v~GHA~~ae~G~DI 32 (112)
T d2idla1 18 EITGHAESGEYGLDV 32 (112)
T ss_dssp EEESCSSCCCSSHHH
T ss_pred EEEecCCCCCCCCcE
Confidence 456999999999985
No 8
>d1qs0b2 c.48.1.2 (B:206-339) 2-oxoisovalerate dehydrogenase E1b, C-domain {Pseudomonas putida [TaxId: 303]}
Probab=14.60 E-value=29 Score=20.43 Aligned_cols=19 Identities=32% Similarity=0.508 Sum_probs=15.3
Q ss_pred hhhhhhhccccCCceEEee
Q 036522 34 VSFGQAAQSRKGEDYFLIK 52 (70)
Q Consensus 34 v~~Gqa~qsKKgEDf~Llk 52 (70)
+-.|++-.-|+|+|.+++-
T Consensus 4 ~piGk~~v~~~G~Ditiis 22 (134)
T d1qs0b2 4 VPLDKAAITRPGNDVSVLT 22 (134)
T ss_dssp CCTTCCCEEECCSSCEEEE
T ss_pred ecCCEEEEEEeCCCEEEEE
Confidence 3458888889999999873
No 9
>d1y14b2 d.230.1.1 (B:1-80) N-terminal, heterodimerisation domain of RBP7 (RpoE) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=14.55 E-value=74 Score=17.01 Aligned_cols=44 Identities=25% Similarity=0.401 Sum_probs=20.5
Q ss_pred cHHHHHhHHhhhhhhcCcchhhhhhhccccCCceEEeecCC--c-----c-ccCCCCCceee
Q 036522 15 PLAALISREMRNEKMEKPNVSFGQAAQSRKGEDYFLIKTDC--Q-----R-VPGNPSSTFSV 68 (70)
Q Consensus 15 pLa~Ll~rEl~~e~~ErP~v~~Gqa~qsKKgEDf~Llk~dC--~-----R-vpgd~sstfsv 68 (70)
|+..-+.++|..+-..|-.-.+| |+|..++. . + +||||+..|-|
T Consensus 21 ~~~~~i~~~L~~~~egkv~~~~G----------~vi~V~~~~~~~i~~G~I~~gdG~~~~~V 72 (80)
T d1y14b2 21 RMKQYLKTKLLEEVEGSCTGKFG----------YILCVLDYDNIDIQRGRILPTDGSAEFNV 72 (80)
T ss_dssp THHHHHHHHHHHHHTTEEETTTE----------EEEEECCGGGCBCC------------CEE
T ss_pred hHHHHHHHHHHHHhCCcCcCCcC----------EEEEEEEEeeeeccCCEEECCCCCEEEEE
Confidence 56677777777766666443333 55554433 2 2 37999887754
No 10
>d3c9ua2 d.139.1.1 (A:138-300) Thiamine monophosphate kinase (ThiL) C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=14.55 E-value=28 Score=20.98 Aligned_cols=9 Identities=67% Similarity=0.966 Sum_probs=7.9
Q ss_pred CCceEEeec
Q 036522 45 GEDYFLIKT 53 (70)
Q Consensus 45 gEDf~Llk~ 53 (70)
||||.||=|
T Consensus 122 GEDyellft 130 (163)
T d3c9ua2 122 GEDYQLLFT 130 (163)
T ss_dssp CCCCEEEEE
T ss_pred CCceeEEEE
Confidence 999999866
Done!