BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036523
(387 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q00IB6|CPL4_ARATH RNA polymerase II C-terminal domain phosphatase-like 4
OS=Arabidopsis thaliana GN=CPL4 PE=1 SV=1
Length = 440
Score = 293 bits (749), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/371 (44%), Positives = 234/371 (63%), Gaps = 14/371 (3%)
Query: 23 SHFKESCSHPQTFNGVCLSCAQTVGEGYGLSFNYMLEGLEFGKDEVTRLKRMNSEIVFGQ 82
S K C HP +F +C C Q + E G+SF Y+ + + +DE++RL+ +S + Q
Sbjct: 62 SSSKGECEHPGSFGNMCFVCGQKLEET-GVSFRYIHKEMRLNEDEISRLRDSDSRFLQRQ 120
Query: 83 RKLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDG-----GGLFMMDGGLLLVKL 137
RKL LVLDLDHTLL+ T L L P++ +YL S DG G LF+++ ++ KL
Sbjct: 121 RKLYLVLDLDHTLLNTTILRDLKPEE-EYLKSHTHSLQDGCNVSGGSLFLLEFMQMMTKL 179
Query: 138 RPYIRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLITCEDFKDTGKKN 197
RP++ SFLKEA +M+ +YI TMG+R+YA +AKLLDPK EY+ R+I+ +D +K+
Sbjct: 180 RPFVHSFLKEASEMFVMYIYTMGDRNYARQMAKLLDPKGEYF-GDRVISRDDGTVRHEKS 238
Query: 198 LDLVLGQERGVVIVDDTAEVWKDHKENLILVGKYNYFKERIRKSKNNDQKSYSERKSDES 257
LD+VLGQE V+I+DDT W HK+NLI++ +Y++F R+ ++ KS SE KSDES
Sbjct: 239 LDVVLGQESAVLILDDTENAWPKHKDNLIVIERYHFFSSSCRQF-DHRYKSLSELKSDES 297
Query: 258 ELNGALVNVLRVLKRVHELFFEN-PENLVWGDVRSFLAKIRRQILAGCTLFFNM---GDV 313
E +GAL VL+VLK+ H LFFEN E + DVR L ++R++IL GC + F+
Sbjct: 298 EPDGALATVLKVLKQAHALFFENVDEGISNRDVRLMLKQVRKEILKGCKIVFSRVFPTKA 357
Query: 314 GPQEFPLLRRRAEELGAACTDVHDSSVTHVVSTRQATEGRRLAEQHNNFLVHPRWIYAAY 373
P++ PL + AEELGA C D+SVTHVV+ TE R A + ++VH WI AA
Sbjct: 358 KPEDHPLW-KMAEELGATCATEVDASVTHVVAMDVGTEKARWAVREKKYVVHRGWIDAAN 416
Query: 374 YLWSRQAENDY 384
YLW +Q E ++
Sbjct: 417 YLWMKQPEENF 427
>sp|Q8LL04|CPL3_ARATH RNA polymerase II C-terminal domain phosphatase-like 3 OS=Arabidopsis
thaliana GN=CPL3 PE=1 SV=2
Length = 1241
Score = 177 bits (450), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 185/341 (54%), Gaps = 20/341 (5%)
Query: 58 LEGLEFGKDEVTRLKRMNSEIVFGQRKLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRES 117
++ + ++ V RL+ N +F +KL LVLD+DHTLL++ + + + L K+E
Sbjct: 903 IQRVAIQRERVRRLEEQNK--MFASQKLSLVLDIDHTLLNSAKFNEVESRHEEILRKKEE 960
Query: 118 SASDGG--GLFMMDGGLLLVKLRPYIRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDPK 175
+ LF + KLRP I +FL++A K+Y++++ TMGN+ YA +AKLLDPK
Sbjct: 961 QDREKPYRHLFRFLHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKLLDPK 1020
Query: 176 CEYYISSRLITCEDF--------KDTGKKNLDLVLGQERGVVIVDDTAEVWKDHKENLIL 227
+ + R+I+ D + K+L+ V+G E VVI+DD+ VW HK NLI
Sbjct: 1021 GVLF-NGRVISKGDDGDPLDGDERVPKSKDLEGVMGMESSVVIIDDSVRVWPQHKMNLIA 1079
Query: 228 VGKYNYFKERIRKSKNNDQKSYSERKSDESELNGALVNVLRVLKRVHELFFENPENLVWG 287
V +Y YF R+ S E DE G L + L V++++H+ FF + +L
Sbjct: 1080 VERYLYFPCS-RRQFGLLGPSLLELDRDEVPEEGTLASSLAVIEKIHQNFFSH-TSLDEV 1137
Query: 288 DVRSFLAKIRRQILAGCTLFFN----MGDVGPQEFPLLRRRAEELGAACTDVHDSSVTHV 343
DVR+ LA +R+ILAGC + F+ +G+ P PL + AE+ GA CT D VTHV
Sbjct: 1138 DVRNILASEQRKILAGCRIVFSRIIPVGEAKPHLHPLWQT-AEQFGAVCTTQVDEHVTHV 1196
Query: 344 VSTRQATEGRRLAEQHNNFLVHPRWIYAAYYLWSRQAENDY 384
V+ T+ A F+VHP W+ A+ +L+ R EN Y
Sbjct: 1197 VTNSLGTDKVNWALTRGRFVVHPGWVEASAFLYQRANENLY 1237
>sp|Q8SV03|FCP1_ENCCU RNA polymerase II subunit A C-terminal domain phosphatase
OS=Encephalitozoon cuniculi (strain GB-M1) GN=FCP1 PE=1
SV=1
Length = 411
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 25/256 (9%)
Query: 29 CSHPQTFNGVCLSCAQTVGE-GYGLSFNYMLEGLEFGKDEVTRLKRMNSEIVFGQRKLQL 87
C+HP +C C + E + Y + ++ +E + + E + Q KL L
Sbjct: 4 CNHPIRLGTLCGVCGMEIQEESHLFCALYNTDNVKITHEEAVAIHKEKMEALEMQMKLIL 63
Query: 88 VLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLLLVKLRPYIRSFLKE 147
VLDLD T+LH T +S+ +G F++D VKLRP + L+
Sbjct: 64 VLDLDQTVLHTT---------------YGTSSLEGTVKFVIDRCRYCVKLRPNLDYMLRR 108
Query: 148 ACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLITCEDFKDTGKKNLDLVLGQE-R 206
K+Y+I++ TMG R YAE I +++DP +Y+ R+IT ++ + K L + + R
Sbjct: 109 ISKLYEIHVYTMGTRAYAERIVEIIDPSGKYF-DDRIITRDENQGVLVKRLSRLFPHDHR 167
Query: 207 GVVIVDDTAEVWKDHKENLILVGKYNYFKERIRKSKNNDQKSYSERKSDESELNGALVNV 266
+VI+DD +VW D+ ENL+L+ + YF + ND + E+ N AL
Sbjct: 168 NIVILDDRPDVW-DYCENLVLIRPFWYFN----RVDINDPLRLKRKIEKEAGENKALEEF 222
Query: 267 LRVLKRVHELFFENPE 282
+ K++ ++ NPE
Sbjct: 223 VSKRKKIEDI--RNPE 236
>sp|Q7TSG2|CTDP1_MOUSE RNA polymerase II subunit A C-terminal domain phosphatase OS=Mus
musculus GN=Ctdp1 PE=1 SV=1
Length = 960
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 38/229 (16%)
Query: 27 ESCSHPQTFNGVCLSCAQTVGE-------------GYGLSFNYMLEGLEFGKDEVTRLKR 73
E CSHP G+C C Q + + +S + + L ++ +L R
Sbjct: 112 EGCSHPVVMKGLCAECGQDLTQLQSKNGRQQVPLSTATVSMVHSVPELMVSSEQAEKLGR 171
Query: 74 MNSEIVFGQRKLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGG-- 131
+ + + RKL L++DLD TL+H T+ + G+F G
Sbjct: 172 EDQQRLHRNRKLVLMVDLDQTLIHTTE--------------QHCPQMSNKGIFHFQLGRG 217
Query: 132 --LLLVKLRPYIRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYY---ISSRLIT 186
+L +LRP+ + FL++ K+Y++++ T G+R YA IA LDP+ + + I SR
Sbjct: 218 EPMLHTRLRPHCKDFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDEC 277
Query: 187 CEDFKDTGKKNL-DLVLGQERGVVIVDDTAEVWKDHKENLILVGKYNYF 234
+ F TG NL +L + V I+DD +VWK NLI V KY YF
Sbjct: 278 IDPFSKTG--NLRNLFPCGDSMVCIIDDREDVWK-FAPNLITVKKYVYF 323
>sp|Q9Y5B0|CTDP1_HUMAN RNA polymerase II subunit A C-terminal domain phosphatase OS=Homo
sapiens GN=CTDP1 PE=1 SV=3
Length = 961
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 38/230 (16%)
Query: 27 ESCSHPQTFNGVCLSCAQTVGE-------------GYGLSFNYMLEGLEFGKDEVTRLKR 73
E CSHP G+C C Q + + +S + + L ++ +L R
Sbjct: 112 EGCSHPVVMKGLCAECGQDLTQLQSKNGKQQVPLSTATVSMVHSVPELMVSSEQAEQLGR 171
Query: 74 MNSEIVFGQRKLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGG-- 131
+ + + RKL L++DLD TL+H T+ + G+F G
Sbjct: 172 EDQQRLHRNRKLVLMVDLDQTLIHTTE--------------QHCQQMSNKGIFHFQLGRG 217
Query: 132 --LLLVKLRPYIRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYY---ISSRLIT 186
+L +LRP+ + FL++ K+Y++++ T G+R YA IA LDP+ + + I SR
Sbjct: 218 EPMLHTRLRPHCKDFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDEC 277
Query: 187 CEDFKDTGKKNL-DLVLGQERGVVIVDDTAEVWKDHKENLILVGKYNYFK 235
+ F TG NL +L + V I+DD +VWK NLI V KY YF+
Sbjct: 278 IDPFSKTG--NLRNLFPCGDSMVCIIDDREDVWK-FAPNLITVKKYVYFQ 324
>sp|Q9P376|FCP1_SCHPO RNA polymerase II subunit A C-terminal domain phosphatase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=fcp1 PE=1 SV=1
Length = 723
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 120/239 (50%), Gaps = 26/239 (10%)
Query: 16 EQLAPCFSHFKESCSHPQTFNGVCLSCAQTVGE----GYG------LSFNYMLEGLEFGK 65
E + + E C+H + G+C C + + GY +S + L
Sbjct: 86 ENFSKIVAKLHEPCTHEVNYGGLCAICGKNITSQDYMGYSDMARANISMTHNTGDLTVSL 145
Query: 66 DEVTRLKRMNSEIVFGQRKLQLVLDLDHTLLHATDLD------MLAPDDRDYLMKRESSA 119
+E +RL+ N + + +++L L++DLD T++HAT +D M P + +Y + R+ +
Sbjct: 146 EEASRLESENVKRLRQEKRLSLIVDLDQTIIHAT-VDPTVGEWMSDPGNVNYDVLRDVRS 204
Query: 120 ---SDGGGLFMMDGGLLLVKLRPYIRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDPKC 176
+G + +K RP + FL++ ++Y+++I TMG + YA+ +AK++DP
Sbjct: 205 FNLQEGPSGYT---SCYYIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTG 261
Query: 177 EYYISSRLITCEDFKDTGKKNLDLVLGQERG-VVIVDDTAEVWKDHKENLILVGKYNYF 234
+ + R+++ +D +K+L + + VV++DD +VW D NLI V Y +F
Sbjct: 262 KLF-QDRVLSRDDSGSLAQKSLRRLFPCDTSMVVVIDDRGDVW-DWNPNLIKVVPYEFF 318
>sp|Q03254|FCP1_YEAST RNA polymerase II subunit A C-terminal domain phosphatase
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=FCP1 PE=1 SV=1
Length = 732
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 26/236 (11%)
Query: 24 HFKESCSHPQTFNGVCLSCAQTVGEGY--GLSFNYMLE-GLEFGKDEVTRLKRMNSEIVF 80
K C+H + G+C C + V G+ + + + L+ + E R + E +
Sbjct: 111 EIKRPCNHDIVYGGLCTQCGKEVSADAFDGVPLDVVGDVDLQISETEAIRTGKALKEHLR 170
Query: 81 GQRKLQLVLDLDHTLLHATDLDMLA-----PDDRDYLMKRESSASDGGG------LFMMD 129
+KL LV+DLD T++H +A P++ ++ R+ + ++M D
Sbjct: 171 RDKKLILVVDLDQTIIHCGVDPTIAEWKNDPNNPNFETLRDVKSFTLDEELVLPLMYMND 230
Query: 130 GGLLL-----------VKLRPYIRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEY 178
G +L VK+RP ++ F + +++++I TM R YA IAK++DP E
Sbjct: 231 DGSMLRPPPVRKCWYYVKVRPGLKEFFAKVAPLFEMHIYTMATRAYALQIAKIVDPTGEL 290
Query: 179 YISSRLITCEDFKDTGKKNLDLVLGQERGVVIVDDTAEVWKDHKENLILVGKYNYF 234
+ L E+ T K L + VV++DD +VW + NLI V YN+F
Sbjct: 291 FGDRILSRDENGSLTTKSLAKLFPTDQSMVVVIDDRGDVW-NWCPNLIKVVPYNFF 345
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 266 VLRVLKRVHELFFE--NPENLVWGDVRSFLAKIRRQILAGCTLFFNMGDVGPQEFPLLRR 323
++ L +H+ +++ + +N ++ + +++++ C +F + P + R
Sbjct: 467 LMGTLSNIHKTYYDMLSQQNEPEPNLMEIIPSLKQKVFQNC--YFVFSGLIPLGTDIQRS 524
Query: 324 R----AEELGAACTDVHDSSVTHVVSTRQATEGRRLAEQHNNFL--VHPRWIYAAYYLWS 377
GA T D TH+++ +T RLA++ N + VHP WI+ W
Sbjct: 525 DIVIWTSTFGATSTPDIDYLTTHLITKNPSTYKARLAKKFNPQIKIVHPDWIFECLVNWK 584
Query: 378 RQAENDY 384
+ E Y
Sbjct: 585 KVDEKPY 591
>sp|Q05D32|CTSL2_HUMAN CTD small phosphatase-like protein 2 OS=Homo sapiens GN=CTDSPL2
PE=1 SV=2
Length = 466
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 84 KLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLLLVKLRPYIRS 143
+ LVLDLD TL+H + L + E +A LF + V+LRP+ R
Sbjct: 287 EFSLVLDLDETLVHCS------------LNELEDAALTFPVLFQDVIYQVYVRLRPFFRE 334
Query: 144 FLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLIT--CEDFKDTGKKNLDLV 201
FL+ +MY+I + T + YA+ + +LDPK + + RL C + K+L+++
Sbjct: 335 FLERMSQMYEIILFTASKKVYADKLLNILDPKKQ-LVRHRLFREHCVCVQGNYIKDLNIL 393
Query: 202 LGQERGVVIVDDTAEVW 218
+I+D++ + +
Sbjct: 394 GRDLSKTIIIDNSPQAF 410
>sp|Q5XIK8|CTSL2_RAT CTD small phosphatase-like protein 2 OS=Rattus norvegicus
GN=Ctdspl2 PE=2 SV=1
Length = 465
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 84 KLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLLLVKLRPYIRS 143
+ LVLDLD TL+H + L + E +A LF + V+LRP+ R
Sbjct: 286 EFSLVLDLDETLVHCS------------LNELEDAALTFPVLFQDVIYQVYVRLRPFFRE 333
Query: 144 FLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLIT--CEDFKDTGKKNLDLV 201
FL+ +MY+I + T + YA+ + +LDPK + + RL C + K+L+++
Sbjct: 334 FLERMSQMYEIILFTASKKVYADKLLNILDPKKQ-LVRHRLFREHCVCVQGNYIKDLNIL 392
Query: 202 LGQERGVVIVDDTAEVWKDHKENLILV 228
+I+D++ + + N I +
Sbjct: 393 GRDLSKTIIIDNSPQAFAYQLSNGIPI 419
>sp|Q8BG15|CTSL2_MOUSE CTD small phosphatase-like protein 2 OS=Mus musculus GN=Ctdspl2
PE=1 SV=1
Length = 465
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 84 KLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLLLVKLRPYIRS 143
+ LVLDLD TL+H + L + E +A LF + V+LRP+ R
Sbjct: 286 EFSLVLDLDETLVHCS------------LNELEDAALTFPVLFQDVIYQVYVRLRPFFRE 333
Query: 144 FLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLIT--CEDFKDTGKKNLDLV 201
FL+ +MY+I + T + YA+ + +LDPK + + RL C + K+L+++
Sbjct: 334 FLERMSQMYEIILFTASKKVYADKLLNILDPKKQ-LVRHRLFREHCVCVQGNYIKDLNIL 392
Query: 202 LGQERGVVIVDDTAEVWKDHKENLILV 228
+I+D++ + + N I +
Sbjct: 393 GRDLSKTIIIDNSPQAFAYQLSNGIPI 419
>sp|Q08BB5|CTL2A_DANRE CTD small phosphatase-like protein 2-A OS=Danio rerio GN=ctdspl2a
PE=2 SV=1
Length = 469
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
Query: 84 KLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLLLVKLRPYIRS 143
+ LVLDLD TL+H + L + E +A LF + V+LRP+ R
Sbjct: 290 EFSLVLDLDETLVHCS------------LNELEDAALTFPVLFQDVIYQVYVRLRPFFRE 337
Query: 144 FLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLIT--CEDFKDTGKKNLDLV 201
FL+ ++Y+I + T + YA+ + +LDPK + + RL C + K+L+++
Sbjct: 338 FLERMSQIYEIILFTASKKVYADKLLNILDPK-KQLVRHRLFREHCVCVQGNYIKDLNIL 396
Query: 202 LGQERGVVIVDDTAEVWKDHKENLILVGKY 231
VI+D++ + + N I + +
Sbjct: 397 GRDLSKTVIIDNSPQAFAYQLSNGIPIESW 426
>sp|Q3KQB6|CTL2B_XENLA CTD small phosphatase-like protein 2-B OS=Xenopus laevis
GN=ctdspl2-b PE=2 SV=1
Length = 466
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
Query: 84 KLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLLLVKLRPYIRS 143
+ LVLDLD TL+H + L + E +A LF + V+LRP+ R
Sbjct: 287 EFSLVLDLDETLVHCS------------LNELEDAALTFPVLFQDVIYQVYVRLRPFFRE 334
Query: 144 FLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLIT--CEDFKDTGKKNLDLV 201
FL+ ++Y+I + T + YA+ + +LDPK + + RL C + K+L+++
Sbjct: 335 FLERMSQIYEIILFTASKKVYADKLLNILDPK-KRLVRHRLFREHCVCVQGNYIKDLNIL 393
Query: 202 LGQERGVVIVDDTAEVWKDHKENLILVGKY 231
+I+D++ + + N I + +
Sbjct: 394 GRDLSKTIIIDNSPQAFAYQLSNGIPIESW 423
>sp|Q5YDB5|CPL2_ARATH RNA polymerase II C-terminal domain phosphatase-like 2
OS=Arabidopsis thaliana GN=CPL2 PE=1 SV=3
Length = 770
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 13/107 (12%)
Query: 133 LLVKLRPY---IRSFLKEAC-KMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRL---I 185
+LVKLRP +RS+L K +++Y+CTM R YA + +LLDP+ L I
Sbjct: 254 VLVKLRPAWEELRSYLTAKTRKRFEVYVCTMAERDYALEMWRLLDPEAHLISLKELRDRI 313
Query: 186 TCEDFKDTGKKNLDLVLG----QERGVVIVDDTAEVWKDHKENLILV 228
C K KK+L V + +++DD +VW+D + + V
Sbjct: 314 VC--VKPDAKKSLLSVFNGGICHPKMAMVIDDRMKVWEDKDQPRVHV 358
>sp|Q801R4|CTL2A_XENLA CTD small phosphatase-like protein 2-A OS=Xenopus laevis
GN=ctdspl2-a PE=2 SV=1
Length = 466
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
Query: 84 KLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLLLVKLRPYIRS 143
+ LVLDLD TL+H + L + E +A LF + V+LRP+ R
Sbjct: 287 EFSLVLDLDETLVHCS------------LNELEDAALTFPVLFQDVIYQVYVRLRPFFRE 334
Query: 144 FLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLIT--CEDFKDTGKKNLDLV 201
FL+ ++Y+I + T + YA+ + +LDPK + + RL C + K+L+++
Sbjct: 335 FLERMSQIYEIILFTASKKVYADKLLNILDPK-KRLVRHRLFREHCVCVQGNYIKDLNIL 393
Query: 202 LGQERGVVIVDDTAEVWKDHKENLILVGKY 231
+I+D++ + + N I + +
Sbjct: 394 GRDLSKTIIIDNSPQAFAYQLSNGIPIESW 423
>sp|Q66KM5|CTSL2_XENTR CTD small phosphatase-like protein 2 OS=Xenopus tropicalis
GN=ctdspl2 PE=2 SV=1
Length = 466
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
Query: 84 KLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLLLVKLRPYIRS 143
+ LVLDLD TL+H + L + E +A LF + V+LRP+ R
Sbjct: 287 EFSLVLDLDETLVHCS------------LNELEDAALTFPVLFQDVIYQVYVRLRPFFRE 334
Query: 144 FLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLIT--CEDFKDTGKKNLDLV 201
FL+ ++Y+I + T + YA+ + +LDPK + + RL C + K+L+++
Sbjct: 335 FLERMSQIYEIILFTASKKVYADKLLNILDPK-KRLVRHRLFREHCVCVQGNYIKDLNIL 393
Query: 202 LGQERGVVIVDDTAEVWKDHKENLILVGKY 231
+I+D++ + + N I + +
Sbjct: 394 GRDLSKTIIIDNSPQAFAYQLSNGIPIESW 423
>sp|Q5F3Z7|CTSL2_CHICK CTD small phosphatase-like protein 2 OS=Gallus gallus GN=CTDSPL2
PE=2 SV=2
Length = 466
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 84 KLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLLLVKLRPYIRS 143
+ LVLDLD TL+H + L + E +A LF + V+LRP+ R
Sbjct: 287 EFSLVLDLDETLVHCS------------LNELEDAALTFPVLFQDVIYQVYVRLRPFFRE 334
Query: 144 FLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLIT--CEDFKDTGKKNLDLV 201
FL+ ++Y+I + T + YA+ + +LDPK + + RL C + K+L+++
Sbjct: 335 FLERMSQIYEIILFTASKKVYADKLLNILDPKKQ-LVRHRLFREHCVCVQGNYIKDLNIL 393
Query: 202 LGQERGVVIVDDTAEVW 218
+I+D++ + +
Sbjct: 394 GRDLSKTIIIDNSPQAF 410
>sp|A4QNX6|CTL2B_DANRE CTD small phosphatase-like protein 2-B OS=Danio rerio GN=ctdspl2b
PE=2 SV=1
Length = 460
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
Query: 84 KLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLLLVKLRPYIRS 143
+ LVLDLD TL+H + L + + +A LF + V+LRP+ R
Sbjct: 281 EFSLVLDLDETLVHCS------------LNELDDAALTFPVLFQDVIYQVYVRLRPFFRE 328
Query: 144 FLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLIT--CEDFKDTGKKNLDLV 201
FL+ ++Y+I + T + YA+ + +LDP+ + + RL C + K+L+++
Sbjct: 329 FLERMSQIYEIILFTASKKVYADKLLNILDPR-KQLVRHRLFREHCVCVQGNYIKDLNIL 387
Query: 202 LGQERGVVIVDDTAEVWKDHKENLILVGKY 231
+I+D++ + + N I + +
Sbjct: 388 GRDLSKTIIIDNSPQAFAYQLSNGIPIESW 417
>sp|Q5S7T7|TIM50_PHYIN Mitochondrial import inner membrane translocase subunit TIM50
OS=Phytophthora infestans GN=TIM50 PE=2 SV=1
Length = 409
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 138 RPYIRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDPK-CEYYI----SSRLITCEDFKD 192
RP + FL+ C+ Y+I I + AE I + LDPK C +I ++R + KD
Sbjct: 195 RPGVDEFLETLCQYYEIVI--FSQNYGAEEIVQKLDPKQCALHILSRDATRYLNGAHVKD 252
Query: 193 TGKKNLDLVLGQERGVVIVDDTAEVWKDHKENLILVGKYNYFKER 237
N DL R VVI+DD ++ EN I V + ++R
Sbjct: 253 LSNLNRDL-----RQVVILDDDPAAYQLQPENAIPVTPFTNGRDR 292
>sp|Q9N4V4|SCPL3_CAEEL CTD small phosphatase-like protein 3 OS=Caenorhabditis elegans
GN=scpl-3 PE=3 SV=1
Length = 287
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 12/89 (13%)
Query: 87 LVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLLLVKLRPYIRSFLK 146
LVLDLD TL+H + L P D ++ +F + V+LRP++R+FL
Sbjct: 67 LVLDLDETLVHCS----LTPLDNATMV--------FPVVFQNITYQVYVRLRPHLRTFLS 114
Query: 147 EACKMYDIYICTMGNRHYAEMIAKLLDPK 175
K ++I I T + YA + +LDP+
Sbjct: 115 RMAKTFEIIIFTASKKVYANKLCDILDPR 143
>sp|Q9XYL0|CTDS_DICDI Probable C-terminal domain small phosphatase OS=Dictyostelium
discoideum GN=fcpA PE=3 SV=1
Length = 306
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 30/154 (19%)
Query: 87 LVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGL--LLVKLRPYIRSF 144
LVLDLD TL+H++ + PD +++ E ++G + + V RP++ F
Sbjct: 139 LVLDLDETLVHSSFKPVHNPD---FIVPVE-----------IEGTIHQVYVVKRPFVDDF 184
Query: 145 LKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLI-------TCEDFKDTGKKN 197
L+ + ++I + T +AK DP ++ + R+I +C + K K+
Sbjct: 185 LRAIAEKFEIVVFTAS-------LAKYADPVLDFLDTGRVIHYRLFRESCHNHKGNYVKD 237
Query: 198 LDLVLGQERGVVIVDDTAEVWKDHKENLILVGKY 231
L + + +IVD++ + H EN I + +
Sbjct: 238 LSRLGRDLKSTIIVDNSPSSYLFHPENAIPIDSW 271
>sp|Q5YDB6|CPL1_ARATH RNA polymerase II C-terminal domain phosphatase-like 1
OS=Arabidopsis thaliana GN=CPL1 PE=1 SV=1
Length = 967
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 13/113 (11%)
Query: 127 MMDGGLLLVKLRPY---IRSFLK-EACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISS 182
M+ +LV++RP +RS+L + K +++Y+CTM R YA + +LLDP+ ++
Sbjct: 265 MIRDTSVLVRMRPSWEELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPEGNLINTN 324
Query: 183 RL---ITCEDFKDTGKKNLDLVL----GQERGVVIVDDTAEVWKDHKENLILV 228
L I C K KK+L V + +++DD +VW + + + V
Sbjct: 325 DLLARIVC--VKSGFKKSLFNVFLDGTCHPKMALVIDDRLKVWDEKDQPRVHV 375
>sp|P38757|NEM1_YEAST Nuclear envelope morphology protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NEM1 PE=1 SV=1
Length = 446
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 22/131 (16%)
Query: 63 FGKDEVTRL----KRMNSEIVFGQRKLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESS 118
FG + R K + ++ Q+K +LV+DLD TL+H+ S
Sbjct: 226 FGTKRMGRFLFPKKLIPKSVLNTQKKKKLVIDLDETLIHSAS------------RSTTHS 273
Query: 119 ASDGGGLFMMDGGL------LLVKLRPYIRSFLKEACKMYDIYICTMGNRHYAEMIAKLL 172
S G L + GL + RPY FL + K YD+ I T + YA+ + L
Sbjct: 274 NSSQGHLVEVKFGLSGIRTLYFIHKRPYCDLFLTKVSKWYDLIIFTASMKEYADPVIDWL 333
Query: 173 DPKCEYYISSR 183
+ S R
Sbjct: 334 ESSFPSSFSKR 344
>sp|Q5U3T3|CNEPB_DANRE CTD nuclear envelope phosphatase 1B OS=Danio rerio GN=ctdnep1b PE=2
SV=1
Length = 245
Score = 40.4 bits (93), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Query: 82 QRKLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLL--LVKLRP 139
+RK+ LVLDLD TL+H+ +L P R + D ++D + V RP
Sbjct: 61 KRKI-LVLDLDETLIHSHHDGVLRP------TVRPGTPPDFILKVVIDKHPVRFFVHKRP 113
Query: 140 YIRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLITCEDFKDTGK--KN 197
++ FL+ + Y++ + T Y +A LD + + R D+G K+
Sbjct: 114 HVDFFLEVVSQWYELVVFTASMEIYGSAVADKLD-NNKAILKRRYYRQHCTLDSGSYIKD 172
Query: 198 LDLVLGQERGVVIVDDTAEVWKDHKENLILVGKY 231
L +V VVI+D++ ++ H +N I + +
Sbjct: 173 LSVVHDDLSSVVILDNSPGAYRSHPDNAIPIKSW 206
>sp|Q54GB2|CTSL2_DICDI CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum
GN=ctdspl2 PE=3 SV=1
Length = 567
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 18/138 (13%)
Query: 84 KLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLLLVKLRPYIRS 143
K+ LVLDLD TL+H + P ++ +L F + K RP+
Sbjct: 390 KISLVLDLDETLVHCS----TEPLEQPHLT--------FPVFFNNTEYQVFAKKRPFFEE 437
Query: 144 FLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLI--TCEDFKDTGKKNLDLV 201
FL + ++++ I T YA + ++DP + I RL +C K+L V
Sbjct: 438 FLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNK--IKYRLYRDSCVYVDGNYLKDLS-V 494
Query: 202 LGQE-RGVVIVDDTAEVW 218
LG++ + VVI+D++ + +
Sbjct: 495 LGRDLKQVVIIDNSPQSF 512
>sp|Q09695|YA22_SCHPO Uncharacterized protein C2F7.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2F7.02c PE=1 SV=1
Length = 325
Score = 39.3 bits (90), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 37/210 (17%)
Query: 24 HFKESCSHPQTFNGVCLSCAQTVGEGYGLSFNYMLEGLEFGKDEVTRLKRMNSEIVFGQR 83
HF E + P F L + GEG N++L + K++ +
Sbjct: 118 HFGEQPTEPIDFADPPLPEVKRYGEG-----NWLLPPI--AKED--------------EG 156
Query: 84 KLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLLLVKLRPYIRS 143
K L+LDLD TL+H++ + P D+++ E DG + + +VK RP +
Sbjct: 157 KKCLILDLDETLVHSS-FKYIEP--ADFVVSIEI---DG-----LQHDVRVVK-RPGVDE 204
Query: 144 FLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLI--TCEDFKDTGKKNLDLV 201
FLK+ M++I + T YA+ + +LD + I RL C +++ K+L +
Sbjct: 205 FLKKMGDMFEIVVFTASLAKYADPVLDMLD--HSHVIRHRLFREACCNYEGNFVKDLSQL 262
Query: 202 LGQERGVVIVDDTAEVWKDHKENLILVGKY 231
+I+D++ + H + + + +
Sbjct: 263 GRNLEDSIIIDNSPSSYIFHPSHAVPISSW 292
>sp|Q9GZU7|CTDS1_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Homo sapiens GN=CTDSP1 PE=1 SV=1
Length = 261
Score = 39.3 bits (90), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 16/150 (10%)
Query: 84 KLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGL--LLVKLRPYI 141
K+ +V+DLD TL+H++ ++ D+++ E +DG + + V RP++
Sbjct: 90 KICVVIDLDETLVHSS---FKPVNNADFIIPVE-----------IDGVVHQVYVLKRPHV 135
Query: 142 RSFLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLITCEDFKDTGKKNLDLV 201
FL+ ++++ + T YA+ +A LLD + +C + K+L +
Sbjct: 136 DEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHRGNYVKDLSRL 195
Query: 202 LGQERGVVIVDDTAEVWKDHKENLILVGKY 231
R V+I+D++ + H +N + V +
Sbjct: 196 GRDLRRVLILDNSPASYVFHPDNAVPVASW 225
>sp|P58466|CTDS1_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Mus musculus GN=Ctdsp1 PE=1 SV=1
Length = 261
Score = 39.3 bits (90), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 16/150 (10%)
Query: 84 KLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGL--LLVKLRPYI 141
K+ +V+DLD TL+H++ ++ D+++ E +DG + + V RP++
Sbjct: 90 KICVVIDLDETLVHSS---FKPVNNADFIIPVE-----------IDGVVHQVYVLKRPHV 135
Query: 142 RSFLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLITCEDFKDTGKKNLDLV 201
FL+ ++++ + T YA+ +A LLD + +C + K+L +
Sbjct: 136 DEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHRGNYVKDLSRL 195
Query: 202 LGQERGVVIVDDTAEVWKDHKENLILVGKY 231
R V+I+D++ + H +N + V +
Sbjct: 196 GRDLRRVLILDNSPASYVFHPDNAVPVASW 225
>sp|Q8BX07|CTDS2_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 2 OS=Mus musculus GN=Ctdsp2 PE=2 SV=1
Length = 270
Score = 39.3 bits (90), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 18/153 (11%)
Query: 82 QRKLQLVLDLDHTLLHATDLDMLAP-DDRDYLMKRESSASDGGGLFMMDGGLLLVKLRPY 140
Q ++ +V+DLD TL+H++ P ++ D+++ E + + V RPY
Sbjct: 98 QGRICVVIDLDETLVHSS----FKPINNADFIVPVEIEGTTHQ---------VYVLKRPY 144
Query: 141 IRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLI--TCEDFKDTGKKNL 198
+ FL+ ++++ + T YA+ + LLD +C + +RL C + K+L
Sbjct: 145 VDEFLRRMGELFECVLFTASLAKYADPVTDLLD-RCGVF-RARLFREACVFHQGCYVKDL 202
Query: 199 DLVLGQERGVVIVDDTAEVWKDHKENLILVGKY 231
+ R VI+D++ + H EN + V +
Sbjct: 203 SRLGRDLRKTVILDNSPASYIFHPENAVPVQSW 235
>sp|Q1RMV9|CNEP1_BOVIN CTD nuclear envelope phosphatase 1 OS=Bos taurus GN=CTDNEP1 PE=2
SV=1
Length = 244
Score = 39.3 bits (90), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 82 QRKLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLL--LVKLRP 139
+RK+ LVLDLD TL+H+ +L P R + D ++D + V RP
Sbjct: 60 KRKI-LVLDLDETLIHSHHDGVLRP------TVRPGTPPDFILKVVIDKHPVRFFVHKRP 112
Query: 140 YIRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDP-----KCEYYISSRLITCEDFKDTG 194
++ FL+ + Y++ + T Y +A LD K YY C +
Sbjct: 113 HVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQH----CTLELGSY 168
Query: 195 KKNLDLVLGQERGVVIVDDTAEVWKDHKENLILVGKY 231
K+L +V +VI+D++ ++ H +N I + +
Sbjct: 169 IKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSW 205
>sp|O95476|CNEP1_HUMAN CTD nuclear envelope phosphatase 1 OS=Homo sapiens GN=CTDNEP1 PE=1
SV=2
Length = 244
Score = 39.3 bits (90), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 82 QRKLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLL--LVKLRP 139
+RK+ LVLDLD TL+H+ +L P R + D ++D + V RP
Sbjct: 60 KRKI-LVLDLDETLIHSHHDGVLRP------TVRPGTPPDFILKVVIDKHPVRFFVHKRP 112
Query: 140 YIRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDP-----KCEYYISSRLITCEDFKDTG 194
++ FL+ + Y++ + T Y +A LD K YY C +
Sbjct: 113 HVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQH----CTLELGSY 168
Query: 195 KKNLDLVLGQERGVVIVDDTAEVWKDHKENLILVGKY 231
K+L +V +VI+D++ ++ H +N I + +
Sbjct: 169 IKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSW 205
>sp|Q3B7T6|CNEP1_RAT CTD nuclear envelope phosphatase 1 OS=Rattus norvegicus GN=Ctdnep1
PE=2 SV=2
Length = 244
Score = 38.9 bits (89), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 82 QRKLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLL--LVKLRP 139
+RK+ LVLDLD TL+H+ +L P R + D ++D + V RP
Sbjct: 60 KRKI-LVLDLDETLIHSHHDGVLRP------TVRPGTPPDFILKVVIDKHPVRFFVHKRP 112
Query: 140 YIRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDP-----KCEYYISSRLITCEDFKDTG 194
++ FL+ + Y++ + T Y +A LD K YY C +
Sbjct: 113 HVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQH----CTLELGSY 168
Query: 195 KKNLDLVLGQERGVVIVDDTAEVWKDHKENLILVGKY 231
K+L +V +VI+D++ ++ H +N I + +
Sbjct: 169 IKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSW 205
>sp|Q3TP92|CNEP1_MOUSE CTD nuclear envelope phosphatase 1 OS=Mus musculus GN=Ctdnep1 PE=2
SV=2
Length = 244
Score = 38.9 bits (89), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 82 QRKLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLL--LVKLRP 139
+RK+ LVLDLD TL+H+ +L P R + D ++D + V RP
Sbjct: 60 KRKI-LVLDLDETLIHSHHDGVLRP------TVRPGTPPDFILKVVIDKHPVRFFVHKRP 112
Query: 140 YIRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDP-----KCEYYISSRLITCEDFKDTG 194
++ FL+ + Y++ + T Y +A LD K YY C +
Sbjct: 113 HVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQH----CTLELGSY 168
Query: 195 KKNLDLVLGQERGVVIVDDTAEVWKDHKENLILVGKY 231
K+L +V +VI+D++ ++ H +N I + +
Sbjct: 169 IKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSW 205
>sp|Q07949|PSR2_YEAST Probable phosphatase PSR2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PSR2 PE=1 SV=1
Length = 397
Score = 38.9 bits (89), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 82 QRKLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGL--LLVKLRP 139
Q+K L+LDLD TL+H++ M + D+++ E +D + + V RP
Sbjct: 225 QQKKCLILDLDETLVHSSFKYMHS---ADFVLPVE-----------IDDQVHNVYVIKRP 270
Query: 140 YIRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLI--TCEDFKDTGKKN 197
+ FL ++Y++ + T YA + LDP I RL C +++ KN
Sbjct: 271 GVDEFLNRVSQLYEVVVFTASVSRYANPLLDTLDPNGT--IHHRLFREACYNYEGNYIKN 328
Query: 198 LDLVLGQERGVVIVDDTAEVWKDHKENLILVGKY 231
L + +I+D++ + H ++ + + +
Sbjct: 329 LSQIGRPLSETIILDNSPASYIFHPQHAVPISSW 362
>sp|Q5U395|CNEPA_DANRE CTD nuclear envelope phosphatase 1A OS=Danio rerio GN=ctdnep1a PE=2
SV=1
Length = 245
Score = 38.9 bits (89), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 82 QRKLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLL--LVKLRP 139
+RK+ LVLDLD TL+H+ +L P R + D ++D + V RP
Sbjct: 61 KRKI-LVLDLDETLIHSHHDGVLRP------TVRPGTPPDFILKVVIDKHPVRFFVHKRP 113
Query: 140 YIRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDP-----KCEYYISSRLITCEDFKDTG 194
++ FL+ + Y++ + T Y +A LD K YY C +
Sbjct: 114 HVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRGILKRRYYRQH----CTLDLGSY 169
Query: 195 KKNLDLVLGQERGVVIVDDTAEVWKDHKENLILVGKY 231
K+L +V +VI+D++ ++ H +N I + +
Sbjct: 170 IKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSW 206
>sp|O14595|CTDS2_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 2 OS=Homo sapiens GN=CTDSP2 PE=1 SV=2
Length = 271
Score = 38.5 bits (88), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 82 QRKLQLVLDLDHTLLHATDLDMLAP-DDRDYLMKRESSASDGGGLFMMDGGLLLVKLRPY 140
Q ++ +V+DLD TL+H++ P ++ D+++ E + + V RPY
Sbjct: 99 QGRICVVIDLDETLVHSS----FKPINNADFIVPIEIEGTTHQ---------VYVLKRPY 145
Query: 141 IRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLI--TCEDFKDTGKKNL 198
+ FL+ ++++ + T YA+ + LLD +C + +RL +C + K+L
Sbjct: 146 VDEFLRRMGELFECVLFTASLAKYADPVTDLLD-RCGVF-RARLFRESCVFHQGCYVKDL 203
Query: 199 DLVLGQERGVVIVDDTAEVWKDHKENLILVGKY 231
+ R +I+D++ + H EN + V +
Sbjct: 204 SRLGRDLRKTLILDNSPASYIFHPENAVPVQSW 236
>sp|P58465|CTDSL_MOUSE CTD small phosphatase-like protein OS=Mus musculus GN=Ctdspl PE=2
SV=3
Length = 276
Score = 38.5 bits (88), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 16/147 (10%)
Query: 87 LVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGL--LLVKLRPYIRSF 144
+V+DLD TL+H++ + + D+++ E +DG + + V RP++ F
Sbjct: 109 VVIDLDETLVHSSFKPI---SNADFIVPVE-----------IDGTIHQVYVLKRPHVDEF 154
Query: 145 LKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLITCEDFKDTGKKNLDLVLGQ 204
L+ ++++ + T YA+ +A LLD + +C + K+L + +
Sbjct: 155 LQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHRGNYVKDLSRLGRE 214
Query: 205 ERGVVIVDDTAEVWKDHKENLILVGKY 231
V+IVD++ + H EN + V +
Sbjct: 215 LSKVIIVDNSPASYIFHPENAVPVQSW 241
>sp|Q9H8V3|ECT2_HUMAN Protein ECT2 OS=Homo sapiens GN=ECT2 PE=1 SV=4
Length = 914
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 323 RRAEELGAACTDVH----------DSSVTHVVSTRQATEGRRLAEQHNNFLVHPRWIYAA 372
R+ EEL T VH +S VTH+V+ E R+A ++ P WIY A
Sbjct: 187 RKKEELVRLVTLVHHMGGVIRKDFNSKVTHLVANCTQGEKFRVAVSLGTPIMKPEWIYKA 246
Query: 373 YYLWSRQAENDYF 385
W R+ E D++
Sbjct: 247 ---WERRNEQDFY 256
>sp|O15194|CTDSL_HUMAN CTD small phosphatase-like protein OS=Homo sapiens GN=CTDSPL PE=1
SV=2
Length = 276
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 87 LVLDLDHTLLHATDLDMLAP-DDRDYLMKRESSASDGGGLFMMDGGL--LLVKLRPYIRS 143
+V+DLD TL+H++ P + D+++ E +DG + + V RP++
Sbjct: 109 VVIDLDETLVHSS----FKPISNADFIVPVE-----------IDGTIHQVYVLKRPHVDE 153
Query: 144 FLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLITCEDFKDTGKKNLDLVLG 203
FL+ ++++ + T YA+ +A LLD + +C + K+L +
Sbjct: 154 FLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHRGNYVKDLSRLGR 213
Query: 204 QERGVVIVDDTAEVWKDHKENLILVGKY 231
+ V+IVD++ + H EN + V +
Sbjct: 214 ELSKVIIVDNSPASYIFHPENAVPVQSW 241
>sp|Q8JIL9|CNEP1_XENLA CTD nuclear envelope phosphatase 1 OS=Xenopus laevis GN=ctdnep1
PE=1 SV=1
Length = 244
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 82 QRKLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLL--LVKLRP 139
+RK+ LVLDLD TL+H+ +L P R + D ++D + V RP
Sbjct: 60 KRKV-LVLDLDETLIHSHHDGVLRP------TVRPGTPPDFILKVVIDKHPVRFFVHKRP 112
Query: 140 YIRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLITCEDFKDTGK--KN 197
++ FL+ + Y++ + T Y +A LD + + R + G K+
Sbjct: 113 HVDFFLEVVSQWYELVVFTASMEIYGSAVADKLD-NNKGVLRRRFYRQHCTLELGSYIKD 171
Query: 198 LDLVLGQERGVVIVDDTAEVWKDHKENLILVGKY 231
L +V VVI+D++ ++ H +N I + +
Sbjct: 172 LSVVHSDLSSVVILDNSPGAYRSHPDNAIPIKSW 205
>sp|O59718|NEM1_SCHPO Nuclear envelope morphology protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nem1 PE=3 SV=1
Length = 476
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 29/152 (19%)
Query: 87 LVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGG----LLLVKLRPYIR 142
LVLDLD TL+H+ + R S + G + + G L + RP++
Sbjct: 306 LVLDLDETLIHS--------------VSRGSRTTSGQPIEVHVPGEHPILYYIHKRPHLD 351
Query: 143 SFLKEACKMYDIYICTMGNRHYAEMIAKLLD------PKCEYYISSRLITCEDFKDTGKK 196
FL + + + + T + YA+ I L+ K Y L+ KD
Sbjct: 352 YFLSNVSQWFRLILFTASVQPYADPIIDYLERDKKIFAKRYYRQHCALVDSSFVKDISIC 411
Query: 197 NLDLVLGQERGVVIVDDTAEVWKDHKENLILV 228
N+ L ++I+D++ + HKEN I +
Sbjct: 412 NIHL-----SRIMIIDNSPASYNAHKENAIPI 438
>sp|Q9PTJ6|CTDSL_CHICK CTD small phosphatase-like protein OS=Gallus gallus GN=NFI1 PE=2
SV=2
Length = 275
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 87 LVLDLDHTLLHATDLDMLAP-DDRDYLMKRESSASDGGGLFMMDGGL--LLVKLRPYIRS 143
+V+DLD TL+H++ P + D+++ E +DG + + V RP++
Sbjct: 108 VVIDLDETLVHSS----FKPISNADFIVPVE-----------IDGTIHQVYVLKRPHVDE 152
Query: 144 FLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLITCEDFKDTGKKNLDLVLG 203
FL+ ++++ + T YA+ +A LLD + +C + K+L +
Sbjct: 153 FLQRMGELFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHRGNYVKDLSRLGR 212
Query: 204 QERGVVIVDDTAEVWKDHKENLILVGKY 231
+ V+IVD++ + H EN + V +
Sbjct: 213 ELSKVIIVDNSPASYIFHPENAVPVQSW 240
>sp|Q6GZT9|037R_FRG3G uncharacterized protein 037R OS=Frog virus 3 (isolate Goorha)
GN=FV3-037R PE=4 SV=1
Length = 209
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 65/165 (39%), Gaps = 34/165 (20%)
Query: 85 LQLVLDLDHTLLHATDLDMLA-PDDRDYLMKRESSASDGGGLFMMDGG------------ 131
+Q+ LDLD TL+H+ + L + Y +K + G L +M G
Sbjct: 1 MQVFLDLDETLIHSIPVSRLGWTKSKPYPVKPFTVQDAGTPLSVMMGSSKAVNDGRKRLA 60
Query: 132 --LLLVK----------LRPYIRSFLKEA-CKMYDIYICTMGNRHYAEMIAKLLDPKCEY 178
L L K RP +R+FL Y I + T ++ YA + K L+ K
Sbjct: 61 TRLSLFKRTVLTDHIMCWRPTLRTFLNGLFASGYKINVWTAASKPYALEVVKALNLKS-- 118
Query: 179 YISSRLITCEDFKDTGKKNLDLVLGQE------RGVVIVDDTAEV 217
Y L+T +D+ K L + G + IVDD EV
Sbjct: 119 YGMGLLVTAQDYPKGSVKRLKYLTGLDAVKIPLSNTAIVDDREEV 163
>sp|Q28HW9|CNEP1_XENTR CTD nuclear envelope phosphatase 1 OS=Xenopus tropicalis GN=ctdnep1
PE=2 SV=1
Length = 244
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 82 QRKLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLL--LVKLRP 139
+RK+ LVLDLD TL+H+ +L P R + D ++D + V RP
Sbjct: 60 KRKV-LVLDLDETLIHSHHDGVLRP------TVRPGTPPDFILKVVIDKHPVRFFVHKRP 112
Query: 140 YIRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLITCEDFKDTGK--KN 197
++ FL+ + Y++ + T Y +A LD + R + G K+
Sbjct: 113 HVDFFLEVVSQWYELVVFTASMEIYGSAVADKLD-NNRGVLRRRFYRQHCTLELGSYIKD 171
Query: 198 LDLVLGQERGVVIVDDTAEVWKDHKENLILVGKY 231
L +V VVI+D++ ++ H +N I + +
Sbjct: 172 LSVVHSDLSSVVILDNSPGAYRSHPDNAIPIKSW 205
>sp|Q913V3|POLG_HCVR6 Genome polyprotein OS=Hepatitis C virus genotype 1b (isolate HCR6)
PE=1 SV=1
Length = 3010
Score = 36.6 bits (83), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 109 RDYLMKRESSASDGGGLFMMDGGLLLVKLRPYIRSFL 145
R Y M+RE +AS GG +F+ GL+L+ L PY + FL
Sbjct: 806 RAYAMEREMAASCGGAVFV---GLVLLTLSPYYKEFL 839
>sp|Q196V6|VF355_IIV3 Putative CTD phosphatase-like protein 355R OS=Invertebrate
iridescent virus 3 GN=IIV3-104L PE=3 SV=1
Length = 186
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 81 GQRKLQLVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGLLLVKLRPY 140
+K ++LDLD+TL+ A DLD + KR S A M+ + + RP+
Sbjct: 3 NNKKKLILLDLDNTLICAEDLDTVKD------KKRLSQAQKQFRTVRMEDYYDIFE-RPH 55
Query: 141 IRSFLKEACKMYDIYICTMGNRHYAEMIAKLL----------DPKCEYYISSRL--ITCE 188
++ FL K + + + T ++ YA + K D K E ++ S ++ +
Sbjct: 56 LQEFLDYLFKNFKVGVWTASSKDYAIFVIKNFITAPQNKVKPDRKIEIFLCSHHCNVSKK 115
Query: 189 DFKDTGKKNLDLVLGQER-----GVVIVDDTAEVWKDHKENLILVGKYNY 233
FK K+L LV Q + V +VDD ++ EN+I V + Y
Sbjct: 116 YFKGIS-KDLKLVTDQWKIIDLSQVKLVDDLEKLANHQPENVIHVKPFFY 164
>sp|P26663|POLG_HCVBK Genome polyprotein OS=Hepatitis C virus genotype 1b (isolate BK)
PE=1 SV=3
Length = 3010
Score = 35.8 bits (81), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 109 RDYLMKRESSASDGGGLFMMDGGLLLVKLRPYIRSFL 145
R Y M RE +AS GG +F+ GL+L+ L PY + FL
Sbjct: 806 RAYAMDREMAASCGGAVFV---GLVLLTLSPYYKVFL 839
>sp|P26662|POLG_HCVJA Genome polyprotein OS=Hepatitis C virus genotype 1b (isolate
Japanese) PE=1 SV=3
Length = 3010
Score = 35.8 bits (81), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 109 RDYLMKRESSASDGGGLFMMDGGLLLVKLRPYIRSFL 145
R Y M RE +AS GG +F+ GL+L+ L PY + FL
Sbjct: 806 RAYAMDREMAASCGGAVFV---GLVLLTLSPYYKVFL 839
>sp|A7TJ85|KFA_VANPO Kynurenine formamidase OS=Vanderwaltozyma polyspora (strain ATCC
22028 / DSM 70294) GN=BNA7 PE=3 SV=1
Length = 261
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 35 FNGVCLSCAQTVGEGYGLSFNYMLEGLEFGKDEVTRLKRMNSEIVFGQRKL--QLVLDLD 92
F G+ ++ + FN + G+E+ + ++++ KL + +D+
Sbjct: 47 FKGIAGEISKVIENNNTQGFNISMFGIEYRLSPSVKHPIHITDVITNTYKLINEYKIDIL 106
Query: 93 HTLLHATDLDM---LAPDDRDYLMKRESSA----SDGGGLFMMDGGLLLVKL---RPYIR 142
+ + H+ + LA D+RDYL+K S S GLF++DG L +L P
Sbjct: 107 YIVGHSVGATLGLQLATDNRDYLIKYSSQLHLIRSTIQGLFLLDGIYSLQELLKEYPTYD 166
Query: 143 SFLKEACKMYDI 154
SF+ +A Y++
Sbjct: 167 SFISKAFTNYEL 178
>sp|Q07800|PSR1_YEAST Phosphatase PSR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PSR1 PE=1 SV=1
Length = 427
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 69/149 (46%), Gaps = 20/149 (13%)
Query: 87 LVLDLDHTLLHATDLDMLAPDDRDYLMKRESSASDGGGLFMMDGGL--LLVKLRPYIRSF 144
L+LDLD TL+H++ + + D +++ E +D + + V RP + F
Sbjct: 260 LILDLDETLVHSSFKYLRSAD---FVLSVE-----------IDDQVHNVYVIKRPGVEEF 305
Query: 145 LKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLI--TCEDFKDTGKKNLDLVL 202
L+ K++++ + T Y + + +LD + I RL C +++ KNL +
Sbjct: 306 LERVGKLFEVVVFTASVSRYGDPLLDILD--TDKVIHHRLFREACYNYEGNYIKNLSQIG 363
Query: 203 GQERGVVIVDDTAEVWKDHKENLILVGKY 231
++I+D++ + H ++ I + +
Sbjct: 364 RPLSDIIILDNSPASYIFHPQHAIPISSW 392
>sp|Q9W4V8|TI50C_DROME Mitochondrial import inner membrane translocase subunit TIM50-C
OS=Drosophila melanogaster GN=ttm50 PE=2 SV=2
Length = 428
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 136 KLRPYIRSFLKEACKMYDIYICTMGNRHYAEMIAKLLDPKCEYYISSRLI-TCEDFKDTG 194
K RP + FL E K ++I + T I LDP YI RL+ F D
Sbjct: 253 KKRPGVDHFLAECAKDFEIVVFTAEQGMTVFPILDALDPNG--YIMYRLVRDATHFVDGH 310
Query: 195 K-KNLDLVLGQERGVVIVDDTAEVWKDHKENLILVGKYN 232
KNLD + + V++VD A K H +N + +++
Sbjct: 311 HVKNLDNLNRDLKKVIVVDWDANATKMHPDNTFGLARWH 349
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 146,382,137
Number of Sequences: 539616
Number of extensions: 6189342
Number of successful extensions: 16402
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 16313
Number of HSP's gapped (non-prelim): 65
length of query: 387
length of database: 191,569,459
effective HSP length: 119
effective length of query: 268
effective length of database: 127,355,155
effective search space: 34131181540
effective search space used: 34131181540
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)