Your job contains 1 sequence.
>036531
MALEAVVYQQDFLSYNGSKDINNLLGCPFDDHHFLENQTESFLDGDYWNNNSTSSSPPAP
TPSIMVPNFNEFYSEDANANVNANVSSILDADHPLHQMDITLPNNRPKRRRAKSRKNQEE
IENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQS
LGARKEIKENSESGSTLFAEFFAFPQYSTSSSRSESEAIMSNETQNSIADIEVNMVESHA
NLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVKVEDDCNLTSGDDIA
TAVYQLLGRIQEDASLN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036531
(317 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q6YTU1 - symbol:P0419H09.4 "cDNA clone:002-131-... 367 2.4e-64 3
UNIPROTKB|Q6K4B1 - symbol:OJ1595_D08.4 "Os09g0468700 prot... 371 3.3e-63 2
TAIR|locus:2207061 - symbol:AT1G72210 "AT1G72210" species... 639 1.4e-62 1
TAIR|locus:2009537 - symbol:AT1G22490 "AT1G22490" species... 593 3.3e-61 2
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 321 8.8e-57 2
UNIPROTKB|Q7XLY9 - symbol:OSJNBa0086O06.20 "OSJNBa0086O06... 320 1.3e-54 3
TAIR|locus:2168235 - symbol:AT5G65320 "AT5G65320" species... 479 1.3e-45 1
TAIR|locus:2116977 - symbol:AT4G01460 "AT4G01460" species... 462 8.1e-44 1
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 456 3.5e-43 1
TAIR|locus:2093746 - symbol:FMA "AT3G24140" species:3702 ... 444 6.6e-42 1
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 442 1.1e-41 1
UNIPROTKB|Q8H7N8 - symbol:OJ1217B09.8 "BHLH transcription... 357 2.2e-36 2
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 234 5.0e-32 2
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 222 6.9e-32 2
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 225 7.2e-29 2
UNIPROTKB|Q8H8H9 - symbol:OJ1126B12.2 "Helix-loop-helix D... 311 8.2e-28 1
UNIPROTKB|Q653A4 - symbol:OSJNBa0043B22.14 "Basic helix-l... 219 8.3e-28 2
TAIR|locus:2178560 - symbol:bHLH071 "AT5G46690" species:3... 310 1.0e-27 1
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 274 6.8e-24 1
UNIPROTKB|Q6Z7U5 - symbol:P0471A11.43 "Putative uncharact... 215 1.2e-17 1
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 162 4.5e-09 1
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 157 1.5e-08 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 153 3.9e-08 1
TAIR|locus:2012146 - symbol:RGE1 "AT1G49770" species:3702... 145 9.1e-08 1
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 144 1.6e-07 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 146 2.5e-07 1
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 136 6.6e-07 2
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 134 1.9e-06 1
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 134 3.5e-06 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 113 3.5e-06 2
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 135 4.2e-06 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 133 5.7e-06 1
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 132 5.8e-06 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 131 5.9e-06 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 132 9.2e-06 1
UNIPROTKB|Q7X8R0 - symbol:OSJNBa0083N12.3 "OSJNBa0083N12.... 129 1.5e-05 1
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 125 1.9e-05 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 126 2.1e-05 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 125 2.1e-05 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 124 2.9e-05 1
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 119 3.0e-05 1
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 125 4.2e-05 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 123 4.4e-05 1
TAIR|locus:504956298 - symbol:AT1G62975 "AT1G62975" speci... 118 8.4e-05 1
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 110 0.00014 2
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 121 0.00014 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 119 0.00014 1
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 109 0.00016 2
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 119 0.00019 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 117 0.00020 1
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 99 0.00021 2
UNIPROTKB|Q941Z7 - symbol:P0431G06.13-1 "BHLH transcripti... 113 0.00028 1
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 117 0.00039 1
UNIPROTKB|Q2QMN2 - symbol:LOC_Os12g40590 "Helix-loop-heli... 112 0.00044 1
TAIR|locus:2038510 - symbol:AT1G06170 "AT1G06170" species... 114 0.00062 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 114 0.00068 1
TAIR|locus:2040287 - symbol:BHLH100 "basic helix-loop-hel... 109 0.00079 1
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 104 0.00097 2
>UNIPROTKB|Q6YTU1 [details] [associations]
symbol:P0419H09.4 "cDNA clone:002-131-D10, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP004213
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:HQ858861 EMBL:AP005918 EMBL:AK107626
RefSeq:NP_001062077.1 UniGene:Os.55174
EnsemblPlants:LOC_Os08g37730.1 GeneID:4345867 KEGG:osa:4345867
eggNOG:NOG250596 ProtClustDB:CLSN2919896 Uniprot:Q6YTU1
Length = 363
Score = 367 (134.2 bits), Expect = 2.4e-64, Sum P(3) = 2.4e-64
Identities = 78/129 (60%), Positives = 95/129 (73%)
Query: 106 RPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIG 165
R KRRRA++ KN+EE+E+QRMTHIAVERNRRKQMNEYL+VLRSLMP SYVQRGDQASIIG
Sbjct: 120 RRKRRRARTVKNREEVESQRMTHIAVERNRRKQMNEYLAVLRSLMPASYVQRGDQASIIG 179
Query: 166 GAINFVKELEQRLQSLGARKEIKE-NSESGSTL-FAEFFAFPQYXXXX---XXXXXXAIM 220
GAIN+VKE+EQ LQSL A + + +++ + L FA FF FPQY A
Sbjct: 180 GAINYVKEMEQLLQSLEAHRHARRARTDAAAALPFAGFFTFPQYSMSAVPTTTTTTVAAA 239
Query: 221 SNETQNSIA 229
+ E N++A
Sbjct: 240 ATENGNAVA 248
Score = 282 (104.3 bits), Expect = 2.4e-64, Sum P(3) = 2.4e-64
Identities = 55/96 (57%), Positives = 75/96 (78%)
Query: 218 AIMSNETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADE 277
A +S +S+ADIEV MVESHANLK+ S+RRP+QLL++V+GLQ RL +LH NV +A
Sbjct: 258 ADVSGSKPSSVADIEVTMVESHANLKVLSRRRPRQLLRMVAGLQHHRLAVLHLNVASAGH 317
Query: 278 IVLYSLSVKVEDDCNLTSGDDIATAVYQLLGRIQED 313
+ LYSLS+KVE+DC LTS DDIA AV+ ++ I+++
Sbjct: 318 MALYSLSLKVEEDCQLTSVDDIAAAVHGIVETIEQE 353
Score = 37 (18.1 bits), Expect = 2.4e-64, Sum P(3) = 2.4e-64
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 1 MALEAVVYQQDF 12
MALEAVV+ + +
Sbjct: 1 MALEAVVFSEGY 12
>UNIPROTKB|Q6K4B1 [details] [associations]
symbol:OJ1595_D08.4 "Os09g0468700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008215 EMBL:CM000146 eggNOG:NOG281753 EMBL:AP005399
EMBL:AP005574 RefSeq:NP_001175879.1 UniGene:Os.98668
EnsemblPlants:LOC_Os09g29360.1 GeneID:9267272 KEGG:osa:9267272
Uniprot:Q6K4B1
Length = 351
Score = 371 (135.7 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 75/108 (69%), Positives = 89/108 (82%)
Query: 104 NNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASI 163
+ R KRRRA++ KN+EE+E+QRMTHIAVERNRRKQMNEYL+VLRSLMP SY QRGDQASI
Sbjct: 112 SGRRKRRRARAAKNKEEVESQRMTHIAVERNRRKQMNEYLAVLRSLMPPSYAQRGDQASI 171
Query: 164 IGGAINFVKELEQRLQSLGARKEIKE----NSESGSTLFAEFFAFPQY 207
+GGAINFVKELEQ LQSL ARK ++ ++ + + FA FF FPQY
Sbjct: 172 VGGAINFVKELEQLLQSLEARKSSRQCAAHDAAAAAAPFASFFTFPQY 219
Score = 292 (107.8 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 55/93 (59%), Positives = 75/93 (80%)
Query: 221 SNETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVL 280
S +++AD+EV MVESHANL++ S+RRP+QLL+LV LQ RLT+LH N+T+A +VL
Sbjct: 253 SGSKPSAVADVEVTMVESHANLRVLSRRRPRQLLRLVVALQGHRLTVLHLNMTSAGHMVL 312
Query: 281 YSLSVKVEDDCNLTSGDDIATAVYQLLGRIQED 313
YS S+KVEDDC LTS D+IATA +Q++ +IQE+
Sbjct: 313 YSFSLKVEDDCQLTSVDEIATAAHQIIEKIQEE 345
>TAIR|locus:2207061 [details] [associations]
symbol:AT1G72210 "AT1G72210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC067754 HOGENOM:HOG000238962 eggNOG:NOG281753
ProtClustDB:CLSN2679534 EMBL:AJ459771 EMBL:BT003871 EMBL:BT006086
IPI:IPI00538709 PIR:F96745 RefSeq:NP_177366.1 UniGene:At.35130
ProteinModelPortal:Q9C7T4 SMR:Q9C7T4 EnsemblPlants:AT1G72210.1
GeneID:843553 KEGG:ath:AT1G72210 TAIR:At1g72210 InParanoid:Q9C7T4
OMA:PQDPFSY PhylomeDB:Q9C7T4 Genevestigator:Q9C7T4 Uniprot:Q9C7T4
Length = 320
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 157/334 (47%), Positives = 198/334 (59%)
Query: 1 MALEAVVYQQDFLSYNGSKDINNLLGCPFDDHHFLENQTESFLD--GDYWXXXXXXXXXX 58
MALEAVVY QD SY KD PF D +F E + + D +
Sbjct: 1 MALEAVVYPQDPFSYISCKDF------PFYDLYFQEEEDQDPQDTKNNIKLGQGQGHGFA 54
Query: 59 XXXXXIMVPNFNEFYS---EDXXXXXXXXXSSILDADHPLHQMDITLPNNRPKRRRAKSR 115
++++ Y+ ED S +D + D+ R KRRR +S
Sbjct: 55 SNNYNGRTGDYSDDYNYNEEDLQWPRDLPYGSAVDTESQPPPSDVAAGGGRRKRRRTRSS 114
Query: 116 KNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELE 175
KN+EEIENQRMTHIAVERNRRKQMNEYL+VLRSLMP Y QRGDQASI+GGAIN++KELE
Sbjct: 115 KNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELE 174
Query: 176 QRLQSL-----------GA-RKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSNE 223
LQS+ GA + K S S S F++FFAFPQY
Sbjct: 175 HHLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAA------ 228
Query: 224 TQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSL 283
+A+IEV MVESHA+LKI +K+RP+QLLKLVS +QS+RLT+LH NVTT D+ VLYS+
Sbjct: 229 --EGMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSI 286
Query: 284 SVKVEDDCNLTSGDDIATAVYQLLGRIQEDASLN 317
SVKVE+ L + +DIA AV Q+L RI+E++S +
Sbjct: 287 SVKVEEGSQLNTVEDIAAAVNQILRRIEEESSFS 320
>TAIR|locus:2009537 [details] [associations]
symbol:AT1G22490 "AT1G22490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006551
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AY088234 EMBL:AF488622 IPI:IPI00545534 PIR:B86358
RefSeq:NP_564171.1 UniGene:At.19247 ProteinModelPortal:Q9SK91
SMR:Q9SK91 EnsemblPlants:AT1G22490.1 GeneID:838855
KEGG:ath:AT1G22490 TAIR:At1g22490 eggNOG:NOG281753
InParanoid:Q8L9T3 OMA:ESHANIK PhylomeDB:Q9SK91
ProtClustDB:CLSN2679534 Genevestigator:Q9SK91 Uniprot:Q9SK91
Length = 304
Score = 593 (213.8 bits), Expect = 3.3e-61, Sum P(2) = 3.3e-61
Identities = 125/218 (57%), Positives = 161/218 (73%)
Query: 103 PNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQAS 162
P +R KRRR ++ KN+EEIENQRMTHIAVERNRRKQMNEYL+VLRSLMP SY QRGDQAS
Sbjct: 92 PQHRRKRRRTRNCKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQAS 151
Query: 163 IIGGAINFVKELEQRLQSLGARK----EIKENSESGSTL---FAEFFAFPQYXXXXXXXX 215
I+GGAIN+VKELE LQS+ ++ + K + S S+L F +FF+FPQY
Sbjct: 152 IVGGAINYVKELEHILQSMEPKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDV 211
Query: 216 XXAIMSNETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTA 275
E+ +S A+IEV + ESHAN+KI +K++P+QLLKL++ LQS+RLT+LH NVTT
Sbjct: 212 P------ESSSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTL 265
Query: 276 DEIVLYSLSVKVEDDCNLTSGDDIATAVYQLLGRIQED 313
+LYS+SV+VE+ L + DDIATA+ Q + RIQE+
Sbjct: 266 HNSILYSISVRVEEGSQLNTVDDIATALNQTIRRIQEE 303
Score = 51 (23.0 bits), Expect = 3.3e-61, Sum P(2) = 3.3e-61
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 1 MALEAVVYQQDFLSY-NGSKDINNLLGCPFDDHHFLENQTESFLD 44
M LEAVVY QD Y + KD + + F+ T++ +D
Sbjct: 1 MPLEAVVYPQDPFGYLSNCKDF--MFHDLYSQEEFVAQDTKNNID 43
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 321 (118.1 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
Identities = 63/83 (75%), Positives = 74/83 (89%)
Query: 103 PNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQAS 162
P + +RRRAKS K++EE E QRMTHIAVERNRR+QMNEYL++LRSLMP+ YVQRGDQAS
Sbjct: 67 PPRKKRRRRAKSCKSREETETQRMTHIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQAS 126
Query: 163 IIGGAINFVKELEQRLQSLGARK 185
I+GGAI FVKELEQ+LQSL A+K
Sbjct: 127 IVGGAIEFVKELEQQLQSLEAQK 149
Score = 281 (104.0 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
Identities = 52/98 (53%), Positives = 80/98 (81%)
Query: 218 AIMSNETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADE 277
A + +E ++ +ADIEV++VE+HA++++ S RRP QLLK+++GLQ++RLT+LH NVTT D
Sbjct: 248 AALQSEHRSGLADIEVSLVETHASVRVMSPRRPGQLLKMIAGLQALRLTVLHLNVTTLDS 307
Query: 278 IVLYSLSVKVEDDCNLTSGDDIATAVYQLLGRIQEDAS 315
+VLY+LSVKVE+ C+LT+ DDIA AV+ +L + +A+
Sbjct: 308 LVLYTLSVKVEEGCSLTTVDDIAAAVHHVLCIVDAEAA 345
Score = 53 (23.7 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 21/85 (24%), Positives = 39/85 (45%)
Query: 130 AVE--RNRRKQMNEYLSVLRSLMPDSYVQRGDQASII----GGAINFVKELEQRLQSLGA 183
A+E + +Q+ + R+L+P + R D A+ + G + +E +
Sbjct: 131 AIEFVKELEQQLQSLEAQKRTLLPH-HKARCDDATPMHNASGSNVGAGGCMEPTTTTSNC 189
Query: 184 RKEIKENSESGSTL-FAEFFAFPQY 207
+ E++ S FA+FFA+PQY
Sbjct: 190 SSSVTEDAPSADAPPFAQFFAYPQY 214
>UNIPROTKB|Q7XLY9 [details] [associations]
symbol:OSJNBa0086O06.20 "OSJNBa0086O06.20 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL662981 UniGene:Os.52382 HOGENOM:HOG000238962
ProteinModelPortal:Q7XLY9 EnsemblPlants:LOC_Os04g50090.1
Gramene:Q7XLY9 OMA:RFFTYPQ Uniprot:Q7XLY9
Length = 362
Score = 320 (117.7 bits), Expect = 1.3e-54, Sum P(3) = 1.3e-54
Identities = 63/83 (75%), Positives = 75/83 (90%)
Query: 103 PNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQAS 162
P R +RRRA+S K++E+ E+QRMTHIAVERNRR+QMNEYL+VLRSLMP+SYV RGDQAS
Sbjct: 72 PGRRKRRRRARSCKSREDAESQRMTHIAVERNRRRQMNEYLAVLRSLMPESYVHRGDQAS 131
Query: 163 IIGGAINFVKELEQRLQSLGARK 185
I+GGAI+FVKELEQ LQSL A+K
Sbjct: 132 IVGGAIDFVKELEQLLQSLEAQK 154
Score = 209 (78.6 bits), Expect = 1.3e-54, Sum P(3) = 1.3e-54
Identities = 42/92 (45%), Positives = 61/92 (66%)
Query: 198 FAEFFAFPQYX---XXXXXXXXXAIMSNETQNSIADIEVNMVESHANLKIRSKRRPKQLL 254
FA FF +PQY + E + +ADIEV++VE+HA++++ + RRP QLL
Sbjct: 201 FARFFTYPQYVWCHNPAQDGGGGGGAAAENRAGVADIEVSLVETHASIRVMAARRPGQLL 260
Query: 255 KLVSGLQSMRLTILHFNVTTADEIVLYSLSVK 286
K+V+GLQ++RLT+LH NVT + LYS+SVK
Sbjct: 261 KMVAGLQALRLTVLHLNVTALGSLALYSISVK 292
Score = 64 (27.6 bits), Expect = 1.3e-54, Sum P(3) = 1.3e-54
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 281 YSLSVKVEDDCNLTSGDDIATAVYQLLGRIQEDAS 315
YS +V VE+ C + + DDIA AV+ +L I +A+
Sbjct: 318 YSTTV-VEEGCGMATVDDIAAAVHHVLCIIDAEAA 351
>TAIR|locus:2168235 [details] [associations]
symbol:AT5G65320 "AT5G65320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB011479 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 EMBL:AY070095 EMBL:AY096704
EMBL:AF488625 IPI:IPI00548412 RefSeq:NP_201335.1 UniGene:At.28395
ProteinModelPortal:Q9FKQ6 SMR:Q9FKQ6 EnsemblPlants:AT5G65320.1
GeneID:836657 KEGG:ath:AT5G65320 TAIR:At5g65320 eggNOG:NOG237691
InParanoid:Q9FKQ6 OMA:PNDQASI PhylomeDB:Q9FKQ6
ProtClustDB:CLSN2916276 Genevestigator:Q9FKQ6 Uniprot:Q9FKQ6
Length = 296
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 96/213 (45%), Positives = 148/213 (69%)
Query: 108 KRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGA 167
++RR +S K + ENQRM HIAVERNRRKQMN +LS+L+S+MP SY Q DQASII G
Sbjct: 84 RKRRRRSEKTIVDKENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGT 143
Query: 168 INFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSNETQNS 227
I+++K+LEQRLQSL A+ + + ++S + +F++FF FPQY A S+ + +
Sbjct: 144 ISYLKKLEQRLQSLEAQLKATKLNQSPN-IFSDFFMFPQYSTATATATATASSSSSSHHH 202
Query: 228 ------IADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLY 281
+AD+EV MVE HAN+K+ +K +P+ L K+++ S+ L+ LH N+TT+ ++ L+
Sbjct: 203 HKRLEVVADVEVTMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLF 262
Query: 282 SLSVKVEDDCNLT-SGDDIATAVYQLLGRIQED 313
+ SVKVE DC LT SG+++A V++++ R+ ++
Sbjct: 263 TFSVKVEADCQLTPSGNEVANTVHEVVRRVHKE 295
>TAIR|locus:2116977 [details] [associations]
symbol:AT4G01460 "AT4G01460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488590 EMBL:AF096370 EMBL:AL161492 EMBL:AY099780
EMBL:AY128881 IPI:IPI00528581 PIR:A85019 PIR:T01948
RefSeq:NP_192055.1 UniGene:At.34425 ProteinModelPortal:Q9M128
SMR:Q9M128 EnsemblPlants:AT4G01460.1 GeneID:828089
KEGG:ath:AT4G01460 TAIR:At4g01460 eggNOG:NOG293017
HOGENOM:HOG000238962 InParanoid:Q9M128 OMA:QINGEVM PhylomeDB:Q9M128
ProtClustDB:CLSN2685500 Genevestigator:Q9M128 Uniprot:Q9M128
Length = 315
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 93/215 (43%), Positives = 140/215 (65%)
Query: 100 ITLPNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGD 159
+T+ R KR+R ++ KN++E+ENQRMTHIAVERNRR+QMNE+L+ LRSLMP S++QRGD
Sbjct: 90 VTVKEKR-KRKRTRAPKNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGD 148
Query: 160 QASIIGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAI 219
QASI+GGAI+F+KELEQ LQSL A K E+ T +
Sbjct: 149 QASIVGGAIDFIKELEQLLQSLEAEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTS 208
Query: 220 MSNETQN----SIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTA 275
+ T ++E ++++H +LK+R KR +Q+LK + ++ ++L ILH ++++
Sbjct: 209 ENGFTARFGGGDTTEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSS 268
Query: 276 DEIVLYSLSVKVEDDCNLTSGDDIATAVYQLLGRI 310
+ V+YS ++K+ED C L S D+IATAV+Q+ +I
Sbjct: 269 FDFVIYSFNLKMEDGCKLGSADEIATAVHQIFEQI 303
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 98/207 (47%), Positives = 138/207 (66%)
Query: 102 LPNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQA 161
+ + KRRR K KN EEIE+QRMTHIAVERNRR+QMN +L+ LRS++P SY+QRGDQA
Sbjct: 169 MTREKRKRRRTKPTKNIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQA 228
Query: 162 SIIGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMS 221
SI+GGAI+FVK LEQ+LQSL A+K +++ ++ + P+ S
Sbjct: 229 SIVGGAIDFVKILEQQLQSLEAQKRSQQSDDNKEQI-------PEDNSLRNISSNKLRAS 281
Query: 222 N-ETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTT-ADEIV 279
N E Q+S IE ++ESH NLKI+ R+ QLL+ + L+ +R T+LH N+T+ + V
Sbjct: 282 NKEEQSSKLKIEATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSV 341
Query: 280 LYSLSVKVEDDCNLTSGDDIATAVYQL 306
YS ++K+ED+CNL S D+I A+ Q+
Sbjct: 342 SYSFNLKMEDECNLGSADEITAAIRQI 368
>TAIR|locus:2093746 [details] [associations]
symbol:FMA "AT3G24140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010052
"guard cell differentiation" evidence=IMP] [GO:0045597 "positive
regulation of cell differentiation" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0051782 "negative regulation of cell
division" evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0003677 GO:GO:0045597 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
GO:GO:0051782 EMBL:AB028621 GO:GO:0010052 EMBL:AK221324
EMBL:BT028961 EMBL:AF488624 IPI:IPI00523995 RefSeq:NP_189056.2
UniGene:At.37586 ProteinModelPortal:Q56YJ8 SMR:Q56YJ8 IntAct:Q56YJ8
STRING:Q56YJ8 PRIDE:Q56YJ8 EnsemblPlants:AT3G24140.1 GeneID:822000
KEGG:ath:AT3G24140 TAIR:At3g24140 eggNOG:NOG326823
InParanoid:Q56YJ8 OMA:KRRRLYG PhylomeDB:Q56YJ8
ProtClustDB:CLSN2680105 Genevestigator:Q56YJ8 Uniprot:Q56YJ8
Length = 414
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 99/235 (42%), Positives = 147/235 (62%)
Query: 99 DITLPNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRG 158
++T + KR+RA++ K EE+E+QRMTHIAVERNRRKQMNE+L VLRSLMP SYVQRG
Sbjct: 170 NVTKKEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRG 229
Query: 159 DQASIIGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXA 218
DQASIIGGAI FV+ELEQ LQ L ++K + E+G + +
Sbjct: 230 DQASIIGGAIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPL 289
Query: 219 IMSN----------------ETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQS 262
I++ E ++ +AD+EV ++ A +KI S+RRP QL+K ++ L+
Sbjct: 290 IITGNVTELEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALED 349
Query: 263 MRLTILHFNVTTADEIVLYSLSVKVEDDCNLTSGDDIATAVYQLLGRIQEDASLN 317
+ L+ILH N+TT ++ VLYS +VK+ + T+ +DIA+++ Q+ I + +++
Sbjct: 350 LHLSILHTNITTMEQTVLYSFNVKITSETRFTA-EDIASSIQQIFSFIHANTNIS 403
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 91/212 (42%), Positives = 139/212 (65%)
Query: 96 HQMDITLPNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYV 155
H + + + KRR+ K KN EEIENQR+ HIAVERNRR+QMNE+++ LR+L+P SY+
Sbjct: 148 HLLPQEMTREKRKRRKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYI 207
Query: 156 QRGDQASIIGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYXXXXXXXX 215
QRGDQASI+GGAIN+VK LEQ +QSL ++K ++ +S S + A
Sbjct: 208 QRGDQASIVGGAINYVKVLEQIIQSLESQKRTQQ--QSNSEVVEN--ALNHLSGISSNDL 263
Query: 216 XXAIMSNETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTA 275
+ E Q I IE ++++H +LK++ +++ QLLK + L+ ++LT+LH N+TT+
Sbjct: 264 WTTL---EDQTCIPKIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTS 320
Query: 276 DEI-VLYSLSVKVEDDCNLTSGDDIATAVYQL 306
V YS ++K+ED+C+L S D+I AV+++
Sbjct: 321 SHSSVSYSFNLKMEDECDLESADEITAAVHRI 352
>UNIPROTKB|Q8H7N8 [details] [associations]
symbol:OJ1217B09.8 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC121489
EMBL:HQ858866 EMBL:AK107555 RefSeq:NP_001049217.1 UniGene:Os.31303
STRING:Q8H7N8 EnsemblPlants:LOC_Os03g08930.1 GeneID:4331887
KEGG:dosa:Os10t0376900-01 KEGG:osa:4331887 OMA:RIPPLHL
ProtClustDB:CLSN2693619 Uniprot:Q8H7N8
Length = 329
Score = 357 (130.7 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 90/216 (41%), Positives = 127/216 (58%)
Query: 106 RPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIG 165
R KRRR K KN+EEIE QRMTHIAVERNRR+QMNEYL+VLRSLMP SY QRGDQASI+G
Sbjct: 91 RRKRRRTKVVKNKEEIECQRMTHIAVERNRRRQMNEYLAVLRSLMPASYSQRGDQASIVG 150
Query: 166 GAINFVKELEQRLQSLGARKEIKENS----ESGSTLFAEFFAFPQYXXXXXXXXXXAIMS 221
GAIN+VKELEQ LQSL +K +K S +G + FA FF+FPQY A +
Sbjct: 151 GAINYVKELEQLLQSLEVQKSLKNRSGAMDAAGDSPFAGFFSFPQYSTSPRTGCSAAASA 210
Query: 222 NETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLY 281
+ S + + ++ A +S + +V G S+++ + ++V+
Sbjct: 211 GSS-GSASSVVMDDTAGSAESGRQSAAIADIEVTMVEGHASLKV-LARRRPKQLLKLVVG 268
Query: 282 SLSVKVED-DCNLTSGDDIATAVYQLLGRIQEDASL 316
+++ N+T+ D A +Y ++++D+ L
Sbjct: 269 LQQLRIPPLHLNVTTVD--AMVLYSFSLKVEDDSKL 302
Score = 284 (105.0 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 58/96 (60%), Positives = 73/96 (76%)
Query: 221 SNETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVL 280
S +IADIEV MVE HA+LK+ ++RRPKQLLKLV GLQ +R+ LH NVTT D +VL
Sbjct: 230 SGRQSAAIADIEVTMVEGHASLKVLARRRPKQLLKLVVGLQQLRIPPLHLNVTTVDAMVL 289
Query: 281 YSLSVKVEDDCNLTSGDDIATAVYQLLGRIQEDASL 316
YS S+KVEDD L S +DIATAV+Q+LG IQ+ ++
Sbjct: 290 YSFSLKVEDDSKLGSVEDIATAVHQILGSIQQQEAV 325
Score = 51 (23.0 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 1 MALEAVVYQQDFLSYNGSKDINNLLGCPFDD 31
MALEAVV+ Q Y +D + G P+ D
Sbjct: 1 MALEAVVFPQGHFGYGCGRD-SPAYGMPWCD 30
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 234 (87.4 bits), Expect = 5.0e-32, Sum P(2) = 5.0e-32
Identities = 45/80 (56%), Positives = 64/80 (80%)
Query: 113 KSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVK 172
++ ++ ++ Q+M+H+ VERNRRKQMNE+L+VLRSLMP YV+RGDQASIIGG + ++
Sbjct: 89 EAEEDNKQDGQQKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYIS 148
Query: 173 ELEQRLQSLGARKEIKENSE 192
EL+Q LQSL A+K+ K +E
Sbjct: 149 ELQQVLQSLEAKKQRKTYAE 168
Score = 135 (52.6 bits), Expect = 5.0e-32, Sum P(2) = 5.0e-32
Identities = 27/87 (31%), Positives = 56/87 (64%)
Query: 219 IMSNETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEI 278
+++N +++++AD+EV ++ LK S + P Q++K+++ L+ + L IL N+ T DE
Sbjct: 277 LVAN-SKSALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINTVDET 335
Query: 279 VLYSLSVKVEDDCNLTSGDDIATAVYQ 305
+L S ++K+ +C L S +++A + Q
Sbjct: 336 MLNSFTIKIGIECQL-SAEELAQQIQQ 361
Score = 43 (20.2 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 104 NNRPKRR--RAKSRKNQEEIENQRMTHIAVERNRR--KQMNEYLSVLRS 148
N+ PKR+ R ++RK ++E E + A E N++ +Q +++V R+
Sbjct: 63 NSSPKRKKQRLETRKEEDE-EEEDGDGEAEEDNKQDGQQKMSHVTVERN 110
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 222 (83.2 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 43/68 (63%), Positives = 58/68 (85%)
Query: 126 MTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARK 185
M+HIAVERNRR+QMN++L VLRSL P Y++RGDQASIIGGAI+F+KEL+ LQSL A+K
Sbjct: 1 MSHIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQTLLQSLEAQK 60
Query: 186 EIKENSES 193
+ ++ ++
Sbjct: 61 KRRQQPQA 68
Score = 143 (55.4 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 226 NS-IADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLS 284
NS +AD+E + ++ L+ S+R P +++++ L+S+ L +LH N+TT D+ VLYS
Sbjct: 134 NSPMADVEARISGANVLLRTLSRRAPP--VRIIALLESLHLEVLHLNITTMDDTVLYSFV 191
Query: 285 VKVEDDCNLTSGDDIATAVYQ 305
+K+ DC+L S DD+A V+Q
Sbjct: 192 LKIGLDCHL-SVDDLAMEVHQ 211
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 225 (84.3 bits), Expect = 7.2e-29, Sum P(2) = 7.2e-29
Identities = 44/64 (68%), Positives = 56/64 (87%)
Query: 125 RMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGAR 184
+M+HI VERNRRKQMNE+L+VLRSLMP YV+RGDQASIIGG ++++KEL+Q L+SL A+
Sbjct: 131 KMSHITVERNRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLEAK 190
Query: 185 KEIK 188
K K
Sbjct: 191 KNRK 194
Score = 121 (47.7 bits), Expect = 7.2e-29, Sum P(2) = 7.2e-29
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 228 IADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVKV 287
+ D+ V + LK S R P Q LK+++ L+S+ L ILH ++ T D+ + S ++K+
Sbjct: 336 VPDVRVEFAGPNLVLKTVSHRAPGQALKIIAALESLSLEILHVSICTVDDATVLSFTIKI 395
Query: 288 EDDCNLTSGDDIATAVYQ 305
+C L S +++ + Q
Sbjct: 396 GIECEL-SAEELVQEIQQ 412
>UNIPROTKB|Q8H8H9 [details] [associations]
symbol:OJ1126B12.2 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC098695
EnsemblPlants:LOC_Os03g03000.1 KEGG:dosa:Os03t0122100-00
OMA:GAIDYVK Uniprot:Q8H8H9
Length = 291
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 75/197 (38%), Positives = 115/197 (58%)
Query: 106 RPKRRRA---KSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQAS 162
RP+ R A + RK EE ENQRMTHIAVERNRR+ MN++L+ LRSL+P +Y+ RGDQA+
Sbjct: 94 RPRPRAAPPPEKRKKPEEAENQRMTHIAVERNRRRLMNDHLASLRSLIPSNYIPRGDQAT 153
Query: 163 IIGGAINFVKELEQRLQSLGA----RKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXA 218
++GGAI++VK+LEQ+L +L A R + + + + F PQY
Sbjct: 154 VVGGAIDYVKQLEQQLVALQAAAAERSGVGVVAAAATAASDGVFVSPQYTSY-------- 205
Query: 219 IMSNETQNSIADIEVNM-VESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTAD- 276
S S D+E V H +++ +R +L++ V+ ++ +RLT+LH VT+
Sbjct: 206 --SEARGGSGVDVEATAAVGGHVRVRVAGRRWTGRLVRAVAAMEDLRLTVLHLAVTSVGH 263
Query: 277 EIVLYSLSVKVEDDCNL 293
+ V+Y ++KV+ L
Sbjct: 264 DAVVYCFNLKVKTTTTL 280
>UNIPROTKB|Q653A4 [details] [associations]
symbol:OSJNBa0043B22.14 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP005470 RefSeq:NP_001174827.1
UniGene:Os.73031 EnsemblPlants:LOC_Os06g33450.2 GeneID:9268477
KEGG:osa:9268477 OMA:YASPAMT Uniprot:Q653A4
Length = 396
Score = 219 (82.2 bits), Expect = 8.3e-28, Sum P(2) = 8.3e-28
Identities = 44/64 (68%), Positives = 54/64 (84%)
Query: 125 RMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGAR 184
+ HIAVERNRRKQMNE L+VLRSLMP YV+RGDQASIIGG ++++KEL+Q L SL A+
Sbjct: 136 KTAHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAK 195
Query: 185 KEIK 188
K+ K
Sbjct: 196 KQRK 199
Score = 116 (45.9 bits), Expect = 8.3e-28, Sum P(2) = 8.3e-28
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 228 IADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVKV 287
+ D++V ++ LK S+R P Q +K+++ L+ L ILH ++T D+ + S +VK+
Sbjct: 317 LPDVKVEFAGANLVLKTVSQRSPGQAVKIIAALEGRSLEILHAKISTVDDTAVNSFTVKI 376
Query: 288 EDDCNLTSGDDIATAVYQ 305
+C L S +++ + Q
Sbjct: 377 GIECEL-SAEELVQVIQQ 393
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 96/249 (38%), Positives = 136/249 (54%)
Query: 87 SILDADHPLHQMDITLPNNRPKRRRAKSR--KNQEEIENQRMTHIAVERNRRKQMNEYLS 144
S + P Q N KRRR K R KN+EE ENQRMTHIAVERNRR+QMN++LS
Sbjct: 47 SEISNQEPPPQRQPPATNRGKKRRRRKPRVCKNEEEAENQRMTHIAVERNRRRQMNQHLS 106
Query: 145 VLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKE--IKEN-SESGSTLF--- 198
VLRSLMP + +GDQASI+GGAI+F+KELE +L SL A+K K N S + ST
Sbjct: 107 VLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQKHHNAKLNQSVTSSTSQDSN 166
Query: 199 --AEFFAFPQYXXXXXXXXXXAIMSNETQNS--------IADIEVNMVESHANLKIRSKR 248
E P S E +N + D+EV ++E+HAN++I S+R
Sbjct: 167 GEQENPHQPSSLSLSQFFLHSYDPSQENRNGSTSSVKTPMEDLEVTLIETHANIRILSRR 226
Query: 249 RPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVKVEDDCNLTSGDDIATAVYQLLG 308
R + L + + +L+ L V + L SLS+ + ++T+ D+ A +Y +
Sbjct: 227 RGFRWSTLAT-TKPPQLSKL---VAS-----LQSLSLSILH-LSVTTLDNYA--IYSISA 274
Query: 309 RIQEDASLN 317
+++E L+
Sbjct: 275 KVEESCQLS 283
Score = 216 (81.1 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 46/104 (44%), Positives = 69/104 (66%)
Query: 221 SNETQNSIADIEVNMVESHANLKIRSKRR-----------PKQLLKLVSGLQSMRLTILH 269
++ + + D+EV ++E+HAN++I S+RR P QL KLV+ LQS+ L+ILH
Sbjct: 199 TSSVKTPMEDLEVTLIETHANIRILSRRRGFRWSTLATTKPPQLSKLVASLQSLSLSILH 258
Query: 270 FNVTTADEIVLYSLSVKVEDDCNLTSGDDIATAVYQLLGRIQED 313
+VTT D +YS+S KVE+ C L+S DDIA AV+ +L I+E+
Sbjct: 259 LSVTTLDNYAIYSISAKVEESCQLSSVDDIAGAVHHMLSIIEEE 302
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 71/180 (39%), Positives = 103/180 (57%)
Query: 126 MTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARK 185
M+HIAVERNRR+QMNE+L LRSL P Y++RGDQASIIGG I F+KEL+Q +Q L ++K
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
Query: 186 EIKE-NSES---------GSTLFAEFFAFPQYXXXXXXXXXXAIMSNETQNSI-ADIEVN 234
K N S S+L A P NS A++E
Sbjct: 61 RRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAK 120
Query: 235 MVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVKVEDDCNLT 294
+ S+ L++ S+R QL+K++S L+ + +LH N+++ +E VLY VK+ +C+L+
Sbjct: 121 ISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKIGLECHLS 180
>UNIPROTKB|Q6Z7U5 [details] [associations]
symbol:P0471A11.43 "Putative uncharacterized protein
P0471A11.43" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] GO:GO:0005634 EMBL:AP004814
Gramene:Q6Z7U5 Uniprot:Q6Z7U5
Length = 83
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 42/77 (54%), Positives = 60/77 (77%)
Query: 235 MVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTT-ADEIVLYSLSVKVEDDCNL 293
M ESHAN+++ + RRP+QLL++V LQ + LT+LH NVTT AD + LYS S+K+ED+C L
Sbjct: 1 MAESHANVRVLAPRRPRQLLRMVVALQCLGLTVLHLNVTTTADHLALYSFSLKMEDECRL 60
Query: 294 TSGDDIATAVYQLLGRI 310
+S D+IA AV Q++ +I
Sbjct: 61 SSVDEIAGAVNQMVTKI 77
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 162 (62.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 51/200 (25%), Positives = 100/200 (50%)
Query: 106 RPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIG 165
RP++R K +EE N H+ ER RR+++N+ LR+++P+ V + D+AS++G
Sbjct: 507 RPRKRGRKPANGREEPLN----HVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLG 560
Query: 166 GAINFVKELEQRLQSLGARKE-IKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSNET 224
AI+++ EL +L +L KE ++ ES L E A P + E
Sbjct: 561 DAISYINELRGKLTALETDKETLQSQMES---LKKERDARPPAPSGGGGDGGARCHAVEI 617
Query: 225 QNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLS 284
+ I +E A ++++ +R +L++ L+ + L + H +V+ ++++ ++
Sbjct: 618 EAKILGLE-------AMIRVQCHKRNHPAARLMTALRELDLDVYHASVSVVKDLMIQQVA 670
Query: 285 VKVEDDCNLTSGDDIATAVY 304
VK+ + S D + A+Y
Sbjct: 671 VKMAS--RVYSQDQLNAALY 688
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 157 (60.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 45/183 (24%), Positives = 91/183 (49%)
Query: 106 RPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIG 165
RPK+R K +EE N H+ ER RR+++N+ LR+++P+ V + D+AS++G
Sbjct: 435 RPKKRGRKPANGREEPLN----HVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLG 488
Query: 166 GAINFVKELEQRLQSLGARK-EIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSNET 224
AI ++ EL+ ++ + K +IK E A + + S +
Sbjct: 489 DAIAYINELKSKVVKTESEKLQIKNQLEEVKLELAG-----RKASASGGDMSSSCSSIKP 543
Query: 225 QNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLS 284
+IEV ++ A +++ S +R +L+S L + L + H +++ +++++ +
Sbjct: 544 VGM--EIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQAT 601
Query: 285 VKV 287
VK+
Sbjct: 602 VKM 604
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 153 (58.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 46/207 (22%), Positives = 103/207 (49%)
Query: 103 PNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQAS 162
P +P++R K +EE N H+ ER RR+++N+ LR+++P+ V + D+AS
Sbjct: 396 PEKKPRKRGRKPANGREEPLN----HVEAERQRREKLNQRFYSLRAVVPN--VSKMDKAS 449
Query: 163 IIGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSN 222
++G AI+++ EL+ +LQ + KE E + + E ++
Sbjct: 450 LLGDAISYISELKSKLQKAESDKE--ELQKQIDVMNKEA------GNAKSSVKDRKCLNQ 501
Query: 223 ETQNSIA-DIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLY 281
E+ I +++V ++ A ++I+ +R K + L+ + L + H +++ +++++
Sbjct: 502 ESSVLIEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQ 561
Query: 282 SLSVKVEDDCNLTSGDDIATAVYQLLG 308
+VK+ + + D + A+ + +G
Sbjct: 562 QATVKMGNQ--FFTQDQLKVALTEKVG 586
>TAIR|locus:2012146 [details] [associations]
symbol:RGE1 "AT1G49770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009790 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011807 EMBL:AF488623 IPI:IPI00539453 PIR:D96534
RefSeq:NP_175399.2 UniGene:At.38170 ProteinModelPortal:Q9FXA3
SMR:Q9FXA3 EnsemblPlants:AT1G49770.1 GeneID:841400
KEGG:ath:AT1G49770 TAIR:At1g49770 eggNOG:NOG272533
HOGENOM:HOG000272699 InParanoid:Q9FXA3 OMA:DHEIHIW PhylomeDB:Q9FXA3
ProtClustDB:CLSN2918353 Genevestigator:Q9FXA3 Uniprot:Q9FXA3
Length = 308
Score = 145 (56.1 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 39/116 (33%), Positives = 63/116 (54%)
Query: 93 HPLHQM-DI-TLPNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLM 150
HP H +I T + K+R ++ KN EE HI ER RRK+M + S L +L+
Sbjct: 37 HPSHPSPEIQTTTVKKGKKRTKRNDKNHEEESPDHEIHIWTERERRKKMRDMFSKLHALL 96
Query: 151 PDSYVQRGDQASIIGGAINFVKELEQRLQSLGARK--EIKENSESGSTLFAEFFAF 204
P + D+++I+ A++ +K LEQ LQ L +K +++ +S S +T FA+
Sbjct: 97 PQ-LPPKADKSTIVDEAVSSIKSLEQTLQKLEMQKLEKLQYSSASTNTTPTTTFAY 151
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 144 (55.7 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 47/197 (23%), Positives = 99/197 (50%)
Query: 114 SRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKE 173
++K +++E Q ++ ER RRK++N+ LS+LRS++P + + D+ SI+G AI+++KE
Sbjct: 165 NKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPK--ISKMDRTSILGDAIDYMKE 222
Query: 174 LEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSNE--TQNSIADI 231
L ++ L + E +E S ++ ++ F + +NE +NS
Sbjct: 223 LLDKINKL--QDEEQELGNSNNSHHSKLFG-----------DLKDLNANEPLVRNS-PKF 268
Query: 232 EVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVKVEDDC 291
E++ + + I +P LL V+ L+++ L I ++ + L + + +
Sbjct: 269 EIDRRDEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSLQASCSEGAEQR 328
Query: 292 NLTSGDDIATAVYQLLG 308
+ + +DI A+++ G
Sbjct: 329 DFITSEDIKQALFRNAG 345
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 146 (56.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 40/186 (21%), Positives = 93/186 (50%)
Query: 103 PNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQAS 162
P +P++R K +EE N H+ ER RR+++N+ LR+++P+ V + D+AS
Sbjct: 395 PEKKPRKRGRKPANGREEPLN----HVEAERQRREKLNQRFYSLRAVVPN--VSKMDKAS 448
Query: 163 IIGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSN 222
++G AI+++ EL+ +LQ + KE + G + + +
Sbjct: 449 LLGDAISYINELKSKLQQAESDKEEIQKKLDGMSKEGN----NGKGCGSRAKERKSSNQD 504
Query: 223 ETQNSIA-DIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLY 281
T +SI +I+V ++ ++++ ++ + + L+ + L + H +++ +++++
Sbjct: 505 STASSIEMEIDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQ 564
Query: 282 SLSVKV 287
+VK+
Sbjct: 565 QATVKM 570
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 136 (52.9 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 27/83 (32%), Positives = 52/83 (62%)
Query: 104 NNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASI 163
NNRP++R + + E N H+ ER RR+++N+ LRS++P+ + + D+AS+
Sbjct: 414 NNRPRKRGRRPANGRAEALN----HVEAERQRREKLNQRFYALRSVVPN--ISKMDKASL 467
Query: 164 IGGAINFVKELEQRLQSLGARKE 186
+G A++++ EL +L+ + A +E
Sbjct: 468 LGDAVSYINELHAKLKVMEAERE 490
Score = 47 (21.6 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 12/69 (17%), Positives = 30/69 (43%)
Query: 221 SNETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVL 280
SN + +DI V ++I ++ + ++ +++ N+ + + VL
Sbjct: 496 SNPPISLDSDINVQTSGEDVTVRINCPLESHPASRIFHAFEESKVEVINSNLEVSQDTVL 555
Query: 281 YSLSVKVED 289
++ VK E+
Sbjct: 556 HTFVVKSEE 564
Score = 43 (20.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 13/57 (22%), Positives = 27/57 (47%)
Query: 223 ETQNSIADIEVNM-VESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEI 278
+T + +N +ESH +I ++ + S L+ + T+LH V ++E+
Sbjct: 509 QTSGEDVTVRINCPLESHPASRIFHAFEESKVEVINSNLEVSQDTVLHTFVVKSEEL 565
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 134 (52.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/86 (38%), Positives = 55/86 (63%)
Query: 113 KSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVK 172
K R N++ +E Q ++ ER RRK++N+ LS+LRS++P + + D+ SI+G AI+++K
Sbjct: 138 KKRSNKK-LEGQPSKNLMAERRRRKRLNDRLSLLRSIVPK--ITKMDRTSILGDAIDYMK 194
Query: 173 ELEQRLQSLGA-RKEIKENSESGSTL 197
EL ++ L +E+ NS STL
Sbjct: 195 ELLDKINKLQEDEQELGSNSHL-STL 219
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 134 (52.2 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 46/181 (25%), Positives = 86/181 (47%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEI 187
++ ER RRK++N+ LS+LRS++P + + D+ SI+G I++VKEL +R+++L +EI
Sbjct: 183 NLMAERRRRKRLNDRLSMLRSIVPK--ISKMDRTSILGDTIDYVKELTERIKTL--EEEI 238
Query: 188 KENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSNETQNSIADIEVNMVESHANLKIRSK 247
E E ++ N T+ D+E N + ++I
Sbjct: 239 GVTPE-------ELDLLNTMKDSSSGNNNEMLVRNSTK---FDVE-NRGSGNTRIEICCP 287
Query: 248 RRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVKVEDDCNLTSGDDIATAVYQLL 307
P LL VS L+ + L I V+ + + + ++ + + S D+I +++
Sbjct: 288 ANPGVLLSTVSALEVLGLEIEQCVVSCFSDFGMQASCLQEDGKRQVVSTDEIKQTLFRSA 347
Query: 308 G 308
G
Sbjct: 348 G 348
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 113 (44.8 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 24/69 (34%), Positives = 49/69 (71%)
Query: 122 ENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSL 181
+ Q+ ++ ER RRK++N +L LRSL+P+ + + D+ASI+G AI+++ L+++++ L
Sbjct: 280 KRQQCKNLEAERKRRKKLNGHLYKLRSLVPN--ITKMDRASILGDAIDYIVGLQKQVKEL 337
Query: 182 GARKEIKEN 190
+ E+++N
Sbjct: 338 --QDELEDN 344
Score = 65 (27.9 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 16/77 (20%), Positives = 39/77 (50%)
Query: 231 IEVNMVESHAN-LKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVKVED 289
+EV V+ + +++ + +P ++L+ + ++ L +++ NVTT +VL V V D
Sbjct: 418 LEVRQVQGNELFVQVLWEHKPGGFVRLMDAMNALGLEVINVNVTTYKTLVLNVFRVMVRD 477
Query: 290 DCNLTSGDDIATAVYQL 306
D + ++ ++
Sbjct: 478 SEVAVQADRVRDSLLEV 494
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 135 (52.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 30/66 (45%), Positives = 47/66 (71%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEI 187
++ ER RRK++N+ L LRSL+P + + D+ASI+G AIN+VKEL+ + L + E+
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPR--ITKLDRASILGDAINYVKELQNEAKEL--QDEL 370
Query: 188 KENSES 193
+ENSE+
Sbjct: 371 EENSET 376
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 133 (51.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 44/146 (30%), Positives = 73/146 (50%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEI 187
++ ER RRK++N+ L +LRS++P + + D+ASI+G AI+++KEL QR+ L E+
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDL--HNEL 363
Query: 188 KENSESGS-----TLFAEFFAFPQYXXXXXXXXXXAIMSNETQNSIADIEVNMVESHA-N 241
E++ GS + F PQ + A +EV + E A N
Sbjct: 364 -ESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVN 422
Query: 242 LKIRSKRRPKQLLKLVSGLQSMRLTI 267
+ + RRP LL + L ++ L +
Sbjct: 423 IHMFCGRRPGLLLATMKALDNLGLDV 448
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 132 (51.5 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 42/208 (20%), Positives = 98/208 (47%)
Query: 104 NNRPKRRRAKSRK----NQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGD 159
+ R +RR+ ++ + +E+ ++H+ E+ RR+++N LR+++P V R D
Sbjct: 222 SERKRRRKLETTRVAAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPK--VSRMD 279
Query: 160 QASIIGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAI 219
+AS++ A+++++ L+ ++ L EIK+ + + +
Sbjct: 280 KASLLSDAVSYIESLKSKIDDL--ETEIKKMKMTETDKLDNSSSNTSPSSVEYQVNQKPS 337
Query: 220 MSNETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIV 279
SN + S +++V +V A ++++++ L+S L M + H N + +++
Sbjct: 338 KSN--RGSDLEVQVKIVGEEAIIRVQTENVNHPTSALMSALMEMDCRVQHANASRLSQVM 395
Query: 280 LYSLSVKVEDDCNLTSGDDIATAVYQLL 307
+ + V V + L S D + T + + L
Sbjct: 396 VQDVVVLVPE--GLRSEDRLRTTLVRTL 421
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 131 (51.2 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 34/163 (20%), Positives = 82/163 (50%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEI 187
H+ ER RR+++NE +L+SL+P + + D+ASI+ I ++KELE+R+Q L + K++
Sbjct: 189 HVMSERRRREKLNEMFLILKSLVPS--IDKVDKASILSETIAYLKELERRVQELESGKKV 246
Query: 188 KENSES---GSTLFAEFFAFPQYXXXXXXXXXXAIMSNETQNSIADIEVNMVES-HANLK 243
++ T+ ++S + + +D+ V +++ +L+
Sbjct: 247 SRPAKRKPCSETIIGG--GGGGGGAGAVKEHHHWVLSESQEGTPSDVRVIVMDKDELHLE 304
Query: 244 IRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVK 286
++ + + + ++ ++S+RL ++ + D ++ + K
Sbjct: 305 VQCRWKELMMTRVFDAIKSLRLDVVSVQASAPDGLLGLKIRAK 347
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 132 (51.5 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 29/91 (31%), Positives = 57/91 (62%)
Query: 106 RPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIG 165
RP++R K +EE N H+ ER RR+++N+ LRS++P+ + + D+AS++G
Sbjct: 378 RPRKRGRKPANGREEPLN----HVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLG 431
Query: 166 GAINFVKELEQRL-----QSLGARKEIKENS 191
AI+++KEL++++ + +G K + E++
Sbjct: 432 DAISYIKELQEKVKIMEDERVGTDKSLSESN 462
>UNIPROTKB|Q7X8R0 [details] [associations]
symbol:OSJNBa0083N12.3 "OSJNBa0083N12.3 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 EMBL:CM000141 eggNOG:NOG254981 EMBL:AL606683
RefSeq:NP_001053749.1 UniGene:Os.49995
EnsemblPlants:LOC_Os04g51070.1 GeneID:4336865 KEGG:osa:4336865
OMA:RASIVGD ProtClustDB:CLSN2695079 Uniprot:Q7X8R0
Length = 464
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 54/215 (25%), Positives = 85/215 (39%)
Query: 68 NFNEFYSEDXXXXXXXXXSSILDADHPLHQMDITLPNNRPKRRRAKSRKNQEEIENQRMT 127
N+ F SED S L + Q D L R K K +
Sbjct: 215 NYGLFPSEDERDVIIGVGSGDLFQEIDDRQFDSVLECRRGKGEFGKGKGK---------A 265
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKEL-----------EQ 176
+ A ER RR+Q+N LR L P+ + D+ASI+G AI ++ EL EQ
Sbjct: 266 NFATERERREQLNVKFRTLRMLFPNP--TKNDRASIVGDAIEYIDELNRTVKELKILVEQ 323
Query: 177 RLQSLGARKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSNETQNSIAD--IEVN 234
+ RK +K + E+ + E + AI S+ Q + ++V
Sbjct: 324 KRHGNNRRKVLKLDQEAAAD--GESSSMRPVRDDQDNQLHGAIRSSWVQRRSKECHVDVR 381
Query: 235 MVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILH 269
+V+ N+K+ K++ LL L +L ++H
Sbjct: 382 IVDDEVNIKLTEKKKANSLLHAAKVLDEFQLELIH 416
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 125 (49.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 36/177 (20%), Positives = 83/177 (46%)
Query: 99 DITLPNNRPKRRRAKSRKNQEEI---ENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYV 155
+I LP ++ + K + + ++ HI ER RR+++ + L +L+P +
Sbjct: 95 EIGLPEHKKAELIIRGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPG--L 152
Query: 156 QRGDQASIIGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYXXXXXXXX 215
++ D+AS++G AI +K L++ ++ +K KE + L +
Sbjct: 153 KKMDKASVLGDAIKHIKYLQESVKEYEEQK--KEKTMESVVLVKKSSLVLDENHQPSSSS 210
Query: 216 XXAIMSNETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNV 272
N + +++ +IEV + +KI +++ ++K++ ++ + L+I + NV
Sbjct: 211 SSDGNRNSSSSNLPEIEVRVSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNV 267
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 126 (49.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 41/195 (21%), Positives = 92/195 (47%)
Query: 123 NQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLG 182
+Q HI ER RR+++++ L ++P +++ D+AS++G AI +VK+L+ +++ G
Sbjct: 177 SQNQEHILAERKRREKLSQRFIALSKIVPG--LKKMDKASVLGDAIKYVKQLQDQVK--G 232
Query: 183 ARKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSNETQNSIADIEVNMVESHANL 242
+E + + L + + E + +IE + E +
Sbjct: 233 LEEEARRRPVEAAVLVKK--SQLSADDDDGSSCDENFDGGEATAGLPEIEARVSERTVLV 290
Query: 243 KIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVKVEDDCNLTSGDDIATA 302
KI + R L+ +S ++++ LTI++ NV SL + + T+G++ + +
Sbjct: 291 KIHCENRKGALITALSEVETIGLTIMNTNVLP---FTSSSLDITIM----ATAGENFSLS 343
Query: 303 VYQLLGRIQEDASLN 317
V ++ ++ + L+
Sbjct: 344 VKDIVKKLNQAFKLS 358
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 125 (49.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 33/171 (19%), Positives = 86/171 (50%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEI 187
H+ ER RR+++NE L L +L+P +++ D+A+++ AI +K+L++R++ L + +
Sbjct: 133 HVLAERKRRQKLNERLIALSALLPG--LKKTDKATVLEDAIKHLKQLQERVKKLEEERVV 190
Query: 188 KENSESGSTLFAEFFAFPQYXXXXXXXXXXA---IMSNETQNSIADIEVNMVESHAN--- 241
+ + L + A + S+ + SI + M+E+ +
Sbjct: 191 TKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEARVSDRD 250
Query: 242 --LKIRSKRRPKQLLKLVSGLQSMRLTILH-FNVTTADEIVLYSLSVKVED 289
+++ ++ ++K++S L+ RL +++ F + + ++ ++ K+++
Sbjct: 251 LLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTLVITILTKMDN 301
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 124 (48.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 46/209 (22%), Positives = 92/209 (44%)
Query: 89 LDADHPLHQMDITLPNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRS 148
L+A HQ KR + SR NQ ++ HI ER RR+++ + L +
Sbjct: 119 LEAQVQPHQKSDEFNRKGTKRAQPFSR-NQSNAQD----HIIAERKRREKLTQRFVALSA 173
Query: 149 LMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYX 208
L+P +++ D+AS++G A+ +K L++R+ L +K KE L +
Sbjct: 174 LVPG--LKKMDKASVLGDALKHIKYLQERVGELEEQK--KERRLESMVLVKKSKLI---L 226
Query: 209 XXXXXXXXXAIMSNETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTIL 268
+ + + +IEV + +KI +++ L K+++ ++ + + I
Sbjct: 227 DDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILIT 286
Query: 269 HFNVTTADEIVLYSLSVKVEDDCNLTSGD 297
+ +V + ++ K E D ++T D
Sbjct: 287 NSSVLNFGPTLDITIIAKKESDFDMTLMD 315
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 119 (46.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 47/197 (23%), Positives = 92/197 (46%)
Query: 110 RRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAIN 169
RR + K +EE EN + ++ ER RR++++ L LRS +P V +ASI+ AI
Sbjct: 15 RRKQVTKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVP--IVTNMTKASIVEDAIT 72
Query: 170 FVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSNETQNSIA 229
++ EL+ +++L + E E+ + E Q + ++ E +
Sbjct: 73 YIGELQNNVKNL--LETFHEMEEAPPEIDEE-----QTDPMIKPEVETSDLNEEMKKLGI 125
Query: 230 DIEVNMV---ESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVK 286
+ V + E LKI +++R K + ++ + I+ ++TT++ +L S SV+
Sbjct: 126 EENVQLCKIGERKFWLKIITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNGAILISASVQ 185
Query: 287 VEDDCNLTSGDDIATAV 303
++ C++ D V
Sbjct: 186 TQELCDVEQTKDFLLEV 202
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 125 (49.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 26/95 (27%), Positives = 55/95 (57%)
Query: 106 RPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIG 165
+P++R K +EE N H+ ER RR+++N+ LR+++P+ + + D+AS++
Sbjct: 303 KPRKRGRKPANGREEALN----HVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLA 356
Query: 166 GAINFVKELEQRLQSLGARKEIKENSESGSTLFAE 200
AI ++ +++++++ K+I + ES AE
Sbjct: 357 DAITYITDMQKKIRVYETEKQIMKRRESNQITPAE 391
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 123 (48.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 41/180 (22%), Positives = 81/180 (45%)
Query: 103 PNNRPKRRRAKSRKN------QEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQ 156
P+ + RRA S+ N HI ER RR+++N+ L +++P ++
Sbjct: 162 PSPSAQTRRASSKGNGGGGSGSSSAAPYAQEHIIAERKRREKINQRFIELSTVIPG--LK 219
Query: 157 RGDQASIIGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYXX---XXXX 213
+ D+A+I+ A+ +VKE++++L L + ES L A
Sbjct: 220 KMDKATILSDAVRYVKEMQEKLSELEQHQN--GGVESAILLKKPCIATSSSDGGCPAASS 277
Query: 214 XXXXAIMSNETQNSIADIEVNMVESHANLKIRSKRRPK-QLLKLVSGLQSMRLTILHFNV 272
+ S ++S+ +IE + + ++I + K L++L++ ++ + L I H NV
Sbjct: 278 AVAGSSSSGTARSSLPEIEAKISHGNVMVRIHGENNGKGSLVRLLAAVEGLHLGITHTNV 337
>TAIR|locus:504956298 [details] [associations]
symbol:AT1G62975 "AT1G62975" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC011000
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000090029 EMBL:AF506369 EMBL:BT006408
EMBL:AK228036 IPI:IPI00535945 PIR:F96654 RefSeq:NP_683462.1
UniGene:At.70486 ProteinModelPortal:Q9LQ08 SMR:Q9LQ08
EnsemblPlants:AT1G62975.1 GeneID:842600 KEGG:ath:AT1G62975
TAIR:At1g62975 eggNOG:NOG241874 InParanoid:Q9LQ08 OMA:YGANEAN
PhylomeDB:Q9LQ08 ProtClustDB:CLSN2690474 Genevestigator:Q9LQ08
Uniprot:Q9LQ08
Length = 259
Score = 118 (46.6 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 23/79 (29%), Positives = 50/79 (63%)
Query: 113 KSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQ-RGDQASIIGGAINFV 171
++ KN ++ E+++M H +ER RR++++ LR+L+P Y+Q + + I A+N++
Sbjct: 63 EANKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNYI 122
Query: 172 KELEQRLQSLGA-RKEIKE 189
K+L+ +++ L R +K+
Sbjct: 123 KDLQIKIKELNEKRNRVKK 141
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 110 (43.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 119 EEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRL 178
+ + + ++H+ ER RR+++NE LRS++P +V + D+ SI+G I +V L +R+
Sbjct: 355 KRLPREDLSHVVAERRRREKLNEKFITLRSMVP--FVTKMDKVSILGDTIAYVNHLRKRV 412
Query: 179 QSL 181
L
Sbjct: 413 HEL 415
Score = 52 (23.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 16/80 (20%), Positives = 41/80 (51%)
Query: 230 DIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRL--TILHFNVTTADEIVLYSLSVKV 287
++EV+++E+ L++R + R LL ++ L + + T +H +V D + ++
Sbjct: 437 EVEVSIIENDVLLEMRCEYRDGLLLDILQVLHELGIETTAVHTSVNDHD----FEAEIRA 492
Query: 288 EDDCNLTSGDDIATAVYQLL 307
+ S ++ A++Q++
Sbjct: 493 KVRGKKASIAEVKRAIHQVI 512
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 40/147 (27%), Positives = 73/147 (49%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEI 187
++ ER RRK++N+ L +LRS++P + + D+ASI+G AI ++KEL Q++ L + E+
Sbjct: 337 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIEYLKELLQKINDL--QNEL 392
Query: 188 KENSESGS-----TLFAEFF-AFPQYXXXXXXXXXXAIMSNETQNSIADIEVNMVESHA- 240
+ + + S T F P + + + T +EV + E A
Sbjct: 393 ESSPATSSLPPTPTSFHPLTPTLPTLPSRIKEEICPSALPSPTGQQ-PRVEVRLREGRAV 451
Query: 241 NLKIRSKRRPKQLLKLVSGLQSMRLTI 267
N+ + RRP LL + ++ + L +
Sbjct: 452 NIHMFCARRPGLLLSAMRAVEGLGLDV 478
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 25/68 (36%), Positives = 44/68 (64%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEI 187
++ ER RRK++N+ LS+LRS++P + + D+ SI+G I +VKEL R+++L
Sbjct: 197 NLMAERRRRKRLNDRLSMLRSVVPR--ISKMDRTSILGDTIGYVKELMDRIKNLQVEAAT 254
Query: 188 KENSESGS 195
++S S +
Sbjct: 255 GDSSSSST 262
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 109 (43.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 28/70 (40%), Positives = 50/70 (71%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEI 187
++ ERNRR+++N+ L LRS++P+ + + D+AS+I +I++++EL + ++L A EI
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPN--ISKLDKASVIKDSIDYMQELIDQEKTLEA--EI 110
Query: 188 KENSESGSTL 197
+E ES STL
Sbjct: 111 RE-LESRSTL 119
Score = 43 (20.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 20/72 (27%), Positives = 33/72 (45%)
Query: 225 QNSIADIEVNMVESHA-----NLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADE-- 277
+N + D + N E+H N +RSK+ KQ+ + +Q + +L VT E
Sbjct: 121 ENPVRDYDCNFAETHLQDFSDNNDMRSKKF-KQM-DYSTRVQHYPIEVLEMKVTWMGEKT 178
Query: 278 -IVLYSLSVKVE 288
+V + S K E
Sbjct: 179 VVVCITCSKKRE 190
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 47/188 (25%), Positives = 89/188 (47%)
Query: 106 RPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIG 165
+P RR++ N +E H+ ER RR+++ + L +++P +++ D+ S++G
Sbjct: 273 QPPERRSRPPANAQE-------HVIAERKRREKLQQQFVALATIVPG--LKKTDKISLLG 323
Query: 166 GAINFVKELEQRLQSLGARKEIKENSESGSTLFAE-FFAFPQYXXXXXXXXXXAIMSNET 224
I++VK+LE+++++L E GS AE AF S+ T
Sbjct: 324 STIDYVKQLEEKVKAL----------EEGSRRTAEPTTAFESKCRITVDDDDGGSASSGT 373
Query: 225 QNSIADIEVNMVES--HAN---LKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTT-ADEI 278
+ + VE+ H N LKI K R L+ ++S L+ L+I++ +V D
Sbjct: 374 DDGSSSSSSPTVEASIHGNTVLLKICCKERRGLLVMILSELEKQGLSIINTSVVPFTDSC 433
Query: 279 VLYSLSVK 286
+ +++ K
Sbjct: 434 LNITITAK 441
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 117 (46.2 bits), Expect = 0.00020, P = 0.00020
Identities = 35/145 (24%), Positives = 73/145 (50%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEI 187
HI ER RR+++N+ L +++P +++ D+A+I+G A+ +VKEL++++++L
Sbjct: 168 HIIAERRRREKINQRFIELSTVIPG--LKKMDKATILGDAVKYVKELQEKVKTL------ 219
Query: 188 KENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSNETQNSIADIEVNMVESHANLKIRSK 247
E + G A A + + + +IEV + E ++++
Sbjct: 220 -EEEDGGGRPAAMVVR-----KSSCSGRQSAAGDGDGEGRVPEIEVRVWERSVLVRVQCG 273
Query: 248 RRPKQLLKLVSGLQSMRLTILHFNV 272
L++L+S ++ +RL I H +V
Sbjct: 274 NSRGLLVRLLSEVEELRLGITHTSV 298
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 99 (39.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 21/54 (38%), Positives = 38/54 (70%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSL 181
+I +ER+RR+++NE L LRS++P+ + + D+ASII AI +++ L+ Q +
Sbjct: 94 NILMERDRRRKLNEKLYALRSVVPN--ITKMDKASIIKDAIEYIQRLQAEEQQM 145
Score = 56 (24.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 15/62 (24%), Positives = 34/62 (54%)
Query: 246 SKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVKVEDDCNLTSGDDIATAVYQ 305
SKRR + ++ L+ +RL ++ N+T+ +++L V+V+ ++ + A+ Q
Sbjct: 239 SKRRDA-MARVCRALEELRLRVITANITSVAGCPMHTLFVEVDHMDSVQMKQMVEAALSQ 297
Query: 306 LL 307
L+
Sbjct: 298 LV 299
>UNIPROTKB|Q941Z7 [details] [associations]
symbol:P0431G06.13-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634
GO:GO:0003677 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
OMA:HNASERE EMBL:AP003683 STRING:Q941Z7
EnsemblPlants:LOC_Os01g72370.1 EnsemblPlants:LOC_Os01g72370.2
Uniprot:Q941Z7
Length = 248
Score = 113 (44.8 bits), Expect = 0.00028, P = 0.00028
Identities = 23/75 (30%), Positives = 51/75 (68%)
Query: 123 NQRMTHIAVERNRRKQMNEYLSVLRSLMPDS-YVQRGDQASIIGGAINFVKELEQRLQSL 181
+++++H A ER+RRKQ+NE S LR+L+PD+ + ++ + + + ++ EL++++++L
Sbjct: 68 HRKLSHNAYERDRRKQLNELYSSLRALLPDADHTKKLSIPTTVSRVLKYIPELQKQVENL 127
Query: 182 GARKEIKENSESGST 196
+K KE + + +T
Sbjct: 128 ERKK--KELTTTSTT 140
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 117 (46.2 bits), Expect = 0.00039, P = 0.00039
Identities = 36/181 (19%), Positives = 87/181 (48%)
Query: 108 KRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGA 167
K+ + + RK ++ + H+ ER RR+++N LR+++P+ V + D+ S++ A
Sbjct: 325 KKGKKRGRKPAHG-RDKPLNHVEAERMRREKLNHRFYALRAVVPN--VSKMDKTSLLEDA 381
Query: 168 INFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSNETQNS 227
+ ++ EL+ + +++ K E F E + E +
Sbjct: 382 VCYINELKSKAENVELEKHAIEIQ------FNEL----KEIAGQRNAIPSVCKYEEKASE 431
Query: 228 IADIEVNMVESH-ANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVK 286
+ IEV ++ES A +++ S++ +L++ L + L + H +++ +++++ +VK
Sbjct: 432 MMKIEVKIMESDDAMVRVESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVK 491
Query: 287 V 287
+
Sbjct: 492 M 492
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 112 (44.5 bits), Expect = 0.00044, P = 0.00044
Identities = 31/91 (34%), Positives = 51/91 (56%)
Query: 94 PL-HQMDITLPNNRPKRRRAK--SRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLM 150
PL +MD LP +RRR K +R+N E TH E+ RR ++NE +L+ L+
Sbjct: 124 PLTEKMDKKLPTRTEERRRVKHKARRNPGYAE----THGLTEKRRRSRINEKFKMLQRLV 179
Query: 151 PDSYVQRGDQASIIGGAINFVKELEQRLQSL 181
P + Q+S + I+++K L+Q+LQ++
Sbjct: 180 PGC--DKCSQSSTLDRTIHYMKSLQQQLQAM 208
>TAIR|locus:2038510 [details] [associations]
symbol:AT1G06170 "AT1G06170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P61244 HOGENOM:HOG000083787 ProtClustDB:CLSN2716481
EMBL:AF488619 EMBL:AC025290 EMBL:BT004262 IPI:IPI00518401
PIR:C86197 RefSeq:NP_172107.1 RefSeq:NP_973769.1 UniGene:At.42353
ProteinModelPortal:Q9LND0 SMR:Q9LND0 EnsemblPlants:AT1G06170.1
EnsemblPlants:AT1G06170.2 GeneID:837126 KEGG:ath:AT1G06170
TAIR:At1g06170 eggNOG:NOG264433 InParanoid:Q9LND0 OMA:YASAIAD
PhylomeDB:Q9LND0 Genevestigator:Q9LND0 Uniprot:Q9LND0
Length = 420
Score = 114 (45.2 bits), Expect = 0.00062, P = 0.00062
Identities = 42/194 (21%), Positives = 87/194 (44%)
Query: 132 ERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQS---LGARKEIK 188
ER RR + L++L+P+ + D+ASI+G AI+++KEL + + L +K +K
Sbjct: 221 ERERRVHFKDRFGDLKNLIPNP--TKNDRASIVGEAIDYIKELLRTIDEFKLLVEKKRVK 278
Query: 189 ENSESGSTLFAEFFAFPQYXXXX--XXXXXXAIMSN--ETQNSIADIEVNMVESHANLKI 244
+ + G + E F A+ + + ++ D++V +++ +KI
Sbjct: 279 QRNREGDDVVDENFKAQSEVVEQCLINKKNNALRCSWLKRKSKFTDVDVRIIDDEVTIKI 338
Query: 245 RSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVKVEDDCNLTSGDDIATAVY 304
K++ LL + + + L + H E + + K+ + ++ + IA V
Sbjct: 339 VQKKKINCLLFVSKVVDQLELDLHHVAGAQIGEHHSFLFNAKISEGSSVYASA-IADRVM 397
Query: 305 QLLGR-IQEDASLN 317
++L + E S N
Sbjct: 398 EVLKKQYMEALSAN 411
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 114 (45.2 bits), Expect = 0.00068, P = 0.00068
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 88 ILDADHP-LHQMDITLPNNRPKRRRAKSRKNQEEIENQRMT--HIAVERNRRKQMNEYLS 144
++DAD + Q DI L + + KS + R H ER RR ++NE +
Sbjct: 218 VMDADQESVSQSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMK 277
Query: 145 VLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQ 179
L+ L+P + R D+ASI+ AI+++K L+ +LQ
Sbjct: 278 ALQELIP--HCSRTDKASILDEAIDYLKSLQMQLQ 310
>TAIR|locus:2040287 [details] [associations]
symbol:BHLH100 "basic helix-loop-helix protein 100"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010106 "cellular response to iron
ion starvation" evidence=IEP] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0055072 "iron ion homeostasis"
evidence=IGI] InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005662 GO:GO:0055072 HSSP:P61244 EMBL:AY074635 EMBL:AF488626
IPI:IPI00522524 IPI:IPI00548751 PIR:E84839 RefSeq:NP_181657.1
RefSeq:NP_850349.1 UniGene:At.37027 ProteinModelPortal:Q9ZVB5
SMR:Q9ZVB5 EnsemblPlants:AT2G41240.1 GeneID:818723
KEGG:ath:AT2G41240 TAIR:At2g41240 eggNOG:NOG256140
HOGENOM:HOG000238662 InParanoid:Q9ZVB5 OMA:HNASERE PhylomeDB:Q9ZVB5
ProtClustDB:CLSN2683761 Genevestigator:Q9ZVB5 Uniprot:Q9ZVB5
Length = 242
Score = 109 (43.4 bits), Expect = 0.00079, P = 0.00079
Identities = 26/94 (27%), Positives = 51/94 (54%)
Query: 98 MDITLPNNRPKRRRAKSRKNQEEIEN----QRMTHIAVERNRRKQMNEYLSVLRS-LMPD 152
+D LP+ S N+ ++N +++ H A ER RRK++N S LRS L P
Sbjct: 32 LDFPLPDLTVTHENVSSENNRTLLDNPVVMKKLNHNASERERRKKINTMFSSLRSCLPPT 91
Query: 153 SYVQRGDQASIIGGAINFVKELEQRLQSLGARKE 186
+ ++ ++ + A+ ++ EL+++++ L +KE
Sbjct: 92 NQTKKLSVSATVSQALKYIPELQEQVKKLMKKKE 125
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 104 (41.7 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 20/54 (37%), Positives = 37/54 (68%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSL 181
H+ ER RR+++ E +L+S++P + + D+ASI+ I ++KELE+R++ L
Sbjct: 245 HVMSERRRREKLKEMFLILKSVVPS--IHKVDKASILAETIAYLKELEKRVEEL 296
Score = 49 (22.3 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 16/84 (19%), Positives = 42/84 (50%)
Query: 223 ETQNSIADIEVNMVESHANLKIRSKRRPKQLL--KLVSGLQSMRLTILHFNVTTADEIVL 280
E ++ ++++ V ++++ L + + + K+LL ++ ++ + L +L +T+D ++
Sbjct: 341 ERRHCVSNVNVTIMDNK-ELLLELQCQWKELLMTRVFDAIKGVSLDVLSVQASTSDGLLG 399
Query: 281 YSLSVKVEDDCNLTSGDDIATAVY 304
+ KV S I + VY
Sbjct: 400 LKIQAKVVVSA-AKSSQQICSIVY 422
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.367 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 317 283 0.00084 115 3 11 22 0.38 34
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 58
No. of states in DFA: 588 (63 KB)
Total size of DFA: 182 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.63u 0.10s 23.73t Elapsed: 00:00:01
Total cpu time: 23.64u 0.10s 23.74t Elapsed: 00:00:01
Start: Mon May 20 16:37:09 2013 End: Mon May 20 16:37:10 2013