BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036531
(317 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2
SV=1
Length = 320
Score = 253 bits (647), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 164/342 (47%), Positives = 206/342 (60%), Gaps = 47/342 (13%)
Query: 1 MALEAVVYQQDFLSYNGSKDINNLLGCPFDDHHFLENQTESFLDGDYWNNNSTSSSPPAP 60
MALEAVVY QD SY KD PF D +F E + D D + +
Sbjct: 1 MALEAVVYPQDPFSYISCKDF------PFYDLYFQEEE-----DQDPQDTKNNIKLGQGQ 49
Query: 61 TPSIMVPNFNEF---YSEDANANV-------NANVSSILDADHPLHQMDITLPNNRPKRR 110
N+N YS+D N N + S +D + D+ R KRR
Sbjct: 50 GHGFASNNYNGRTGDYSDDYNYNEEDLQWPRDLPYGSAVDTESQPPPSDVAAGGGRRKRR 109
Query: 111 RAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINF 170
R +S KN+EEIENQRMTHIAVERNRRKQMNEYL+VLRSLMP Y QRGDQASI+GGAIN+
Sbjct: 110 RTRSSKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINY 169
Query: 171 VKELEQRLQSL------------GARKEIKENSESGSTLFAEFFAFPQYS---TSSSRSE 215
+KELE LQS+ + K S S S F++FFAFPQYS TS++ +E
Sbjct: 170 LKELEHHLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAAE 229
Query: 216 SEAIMSNETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTA 275
+A+IEV MVESHA+LKI +K+RP+QLLKLVS +QS+RLT+LH NVTT
Sbjct: 230 -----------GMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTR 278
Query: 276 DEIVLYSLSVKVEDDCNLTSGDDIATAVYQLLGRIQEDASLN 317
D+ VLYS+SVKVE+ L + +DIA AV Q+L RI+E++S +
Sbjct: 279 DDSVLYSISVKVEEGSQLNTVEDIAAAVNQILRRIEEESSFS 320
>sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2
SV=2
Length = 304
Score = 229 bits (584), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 203/332 (61%), Gaps = 46/332 (13%)
Query: 1 MALEAVVYQQDFLSY-NGSKDINNLLGCPFDDHHFLENQT----------ESFLDGDYWN 49
M LEAVVY QD Y + KD + + F+ T +SF++ +
Sbjct: 1 MPLEAVVYPQDPFGYLSNCKDF--MFHDLYSQEEFVAQDTKNNIDKLGHEQSFVEQGKED 58
Query: 50 NNSTSSSPPAPTPSIMVPNFNEFYSEDANANVNANVSSILDADHPLHQMDITLPNNRPKR 109
++ P +++P+ E +++I HP P +R KR
Sbjct: 59 DHQWRDYHQYP---LLIPSLGE----------ELGLTAIDVESHP-------PPQHRRKR 98
Query: 110 RRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAIN 169
RR ++ KN+EEIENQRMTHIAVERNRRKQMNEYL+VLRSLMP SY QRGDQASI+GGAIN
Sbjct: 99 RRTRNCKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAIN 158
Query: 170 FVKELEQRLQSLGARK----EIKENSESGSTL---FAEFFAFPQYSTSSSRSESEAIMSN 222
+VKELE LQS+ ++ + K + S S+L F +FF+FPQYST SS E+ S
Sbjct: 159 YVKELEHILQSMEPKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPESSSSP 218
Query: 223 ETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYS 282
A+IEV + ESHAN+KI +K++P+QLLKL++ LQS+RLT+LH NVTT +LYS
Sbjct: 219 ------AEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYS 272
Query: 283 LSVKVEDDCNLTSGDDIATAVYQLLGRIQEDA 314
+SV+VE+ L + DDIATA+ Q + RIQE+
Sbjct: 273 ISVRVEEGSQLNTVDDIATALNQTIRRIQEET 304
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 184 bits (467), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 149/234 (63%), Gaps = 17/234 (7%)
Query: 99 DITLPNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRG 158
++T + KR+RA++ K EE+E+QRMTHIAVERNRRKQMNE+L VLRSLMP SYVQRG
Sbjct: 170 NVTKKEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRG 229
Query: 159 DQASIIGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYSTSSSRSESEA 218
DQASIIGGAI FV+ELEQ LQ L ++K + E+G + + T+ +
Sbjct: 230 DQASIIGGAIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPL 289
Query: 219 IMSN----------------ETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQS 262
I++ E ++ +AD+EV ++ A +KI S+RRP QL+K ++ L+
Sbjct: 290 IITGNVTELEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALED 349
Query: 263 MRLTILHFNVTTADEIVLYSLSVKVEDDCNLTSGDDIATAVYQLLGRIQEDASL 316
+ L+ILH N+TT ++ VLYS +VK+ + T+ +DIA+++ Q+ I + ++
Sbjct: 350 LHLSILHTNITTMEQTVLYSFNVKITSETRFTA-EDIASSIQQIFSFIHANTNI 402
>sp|Q9FKQ6|BH099_ARATH Transcription factor bHLH99 OS=Arabidopsis thaliana GN=BHLH99 PE=2
SV=1
Length = 296
Score = 178 bits (452), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 147/199 (73%), Gaps = 8/199 (4%)
Query: 122 ENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSL 181
ENQRM HIAVERNRRKQMN +LS+L+S+MP SY Q DQASII G I+++K+LEQRLQSL
Sbjct: 98 ENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLEQRLQSL 157
Query: 182 GARKEIKENSESGSTLFAEFFAFPQYSTSSSRSESEAIMSNETQNS------IADIEVNM 235
A+ + + ++S + +F++FF FPQYST+++ + + A S+ + + +AD+EV M
Sbjct: 158 EAQLKATKLNQSPN-IFSDFFMFPQYSTATATATATASSSSSSHHHHKRLEVVADVEVTM 216
Query: 236 VESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVKVEDDCNLT- 294
VE HAN+K+ +K +P+ L K+++ S+ L+ LH N+TT+ ++ L++ SVKVE DC LT
Sbjct: 217 VERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFTFSVKVEADCQLTP 276
Query: 295 SGDDIATAVYQLLGRIQED 313
SG+++A V++++ R+ ++
Sbjct: 277 SGNEVANTVHEVVRRVHKE 295
>sp|Q9M128|BH057_ARATH Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2
SV=1
Length = 315
Score = 177 bits (450), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 137/199 (68%), Gaps = 4/199 (2%)
Query: 116 KNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELE 175
KN++E+ENQRMTHIAVERNRR+QMNE+L+ LRSLMP S++QRGDQASI+GGAI+F+KELE
Sbjct: 105 KNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELE 164
Query: 176 QRLQSLGARKE---IKENSESGSTLFAEFFAFPQYSTSSSRSESE-AIMSNETQNSIADI 231
Q LQSL A K E ++ S + A S SS + SE + ++
Sbjct: 165 QLLQSLEAEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDTTEV 224
Query: 232 EVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVKVEDDC 291
E ++++H +LK+R KR +Q+LK + ++ ++L ILH ++++ + V+YS ++K+ED C
Sbjct: 225 EATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKMEDGC 284
Query: 292 NLTSGDDIATAVYQLLGRI 310
L S D+IATAV+Q+ +I
Sbjct: 285 KLGSADEIATAVHQIFEQI 303
>sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2
SV=1
Length = 371
Score = 172 bits (436), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 136/193 (70%), Gaps = 9/193 (4%)
Query: 117 NQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQ 176
N EEIE+QRMTHIAVERNRR+QMN +L+ LRS++P SY+QRGDQASI+GGAI+FVK LEQ
Sbjct: 184 NIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQ 243
Query: 177 RLQSLGARKEIKENSESGSTLFAEFFAFPQYSTSSSRSESEAIMSN-ETQNSIADIEVNM 235
+LQSL A+K +++ ++ + P+ ++ + S ++ SN E Q+S IE +
Sbjct: 244 QLQSLEAQKRSQQSDDNKEQI-------PEDNSLRNISSNKLRASNKEEQSSKLKIEATV 296
Query: 236 VESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTT-ADEIVLYSLSVKVEDDCNLT 294
+ESH NLKI+ R+ QLL+ + L+ +R T+LH N+T+ + V YS ++K+ED+CNL
Sbjct: 297 IESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDECNLG 356
Query: 295 SGDDIATAVYQLL 307
S D+I A+ Q+
Sbjct: 357 SADEITAAIRQIF 369
>sp|Q56XR0|BH071_ARATH Transcription factor bHLH71 OS=Arabidopsis thaliana GN=BHLH71 PE=1
SV=1
Length = 327
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 146/229 (63%), Gaps = 35/229 (15%)
Query: 116 KNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELE 175
KN+EE ENQRMTHIAVERNRR+QMN++LSVLRSLMP + +GDQASI+GGAI+F+KELE
Sbjct: 78 KNEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELE 137
Query: 176 QRLQSLGARKEI-------------------KENSESGSTL-FAEFFAFPQYSTSSSRSE 215
+L SL A+K +EN S+L ++FF + +R+
Sbjct: 138 HKLLSLEAQKHHNAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQFFLHSYDPSQENRNG 197
Query: 216 SEAIMSNETQNSIADIEVNMVESHANLKIRSKRR-----------PKQLLKLVSGLQSMR 264
S ++ + + D+EV ++E+HAN++I S+RR P QL KLV+ LQS+
Sbjct: 198 S----TSSVKTPMEDLEVTLIETHANIRILSRRRGFRWSTLATTKPPQLSKLVASLQSLS 253
Query: 265 LTILHFNVTTADEIVLYSLSVKVEDDCNLTSGDDIATAVYQLLGRIQED 313
L+ILH +VTT D +YS+S KVE+ C L+S DDIA AV+ +L I+E+
Sbjct: 254 LSILHLSVTTLDNYAIYSISAKVEESCQLSSVDDIAGAVHHMLSIIEEE 302
>sp|Q700E4|BH067_ARATH Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2
SV=1
Length = 358
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 133/193 (68%), Gaps = 8/193 (4%)
Query: 116 KNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELE 175
KN EEIENQR+ HIAVERNRR+QMNE+++ LR+L+P SY+QRGDQASI+GGAIN+VK LE
Sbjct: 168 KNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLE 227
Query: 176 QRLQSLGARKEIKENSESGSTLFAEFFAFPQYSTSSSRSESEAIMSNETQNSIADIEVNM 235
Q +QSL ++K ++ S S A + S S ++ + E Q I IE +
Sbjct: 228 QIIQSLESQKRTQQQSNSEVVENA-------LNHLSGISSNDLWTTLEDQTCIPKIEATV 280
Query: 236 VESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTT-ADEIVLYSLSVKVEDDCNLT 294
+++H +LK++ +++ QLLK + L+ ++LT+LH N+TT + V YS ++K+ED+C+L
Sbjct: 281 IQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKMEDECDLE 340
Query: 295 SGDDIATAVYQLL 307
S D+I AV+++
Sbjct: 341 SADEITAAVHRIF 353
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1
Length = 202
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 108/184 (58%), Gaps = 19/184 (10%)
Query: 126 MTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARK 185
M+HIAVERNRR+QMNE+L LRSL P Y++RGDQASIIGG I F+KEL+Q +Q L ++K
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
Query: 186 E---------------IKENSESGSTLFAEFFAFPQYSTSSSRSESEAIMSNETQNSIAD 230
I+ +S +T F T+S+ E A ++ A+
Sbjct: 61 RRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPH----AN 116
Query: 231 IEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVKVEDD 290
+E + S+ L++ S+R QL+K++S L+ + +LH N+++ +E VLY VK+ +
Sbjct: 117 VEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKIGLE 176
Query: 291 CNLT 294
C+L+
Sbjct: 177 CHLS 180
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH
PE=1 SV=1
Length = 364
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 58/69 (84%)
Query: 124 QRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGA 183
Q+M+H+ VERNRRKQMNE+L+VLRSLMP YV+RGDQASIIGG + ++ EL+Q LQSL A
Sbjct: 100 QKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEA 159
Query: 184 RKEIKENSE 192
+K+ K +E
Sbjct: 160 KKQRKTYAE 168
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 224 TQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSL 283
+++++AD+EV ++ LK S + P Q++K+++ L+ + L IL N+ T DE +L S
Sbjct: 281 SKSALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINTVDETMLNSF 340
Query: 284 SVKVEDDCNLTSGDDIATAVYQ 305
++K+ +C L S +++A + Q
Sbjct: 341 TIKIGIECQL-SAEELAQQIQQ 361
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 106 RPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIG 165
RPK+R K +EE N H+ ER RR+++N+ LR+++P+ V + D+AS++G
Sbjct: 435 RPKKRGRKPANGREEPLN----HVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLG 488
Query: 166 GAINFVKELEQRLQSLGARK-EIKENSESGSTLFAEFFAFPQYSTSSSRSESEAIMSNET 224
AI ++ EL+ ++ + K +IK E A A SS S + E
Sbjct: 489 DAIAYINELKSKVVKTESEKLQIKNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGME- 547
Query: 225 QNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLS 284
IEV ++ A +++ S +R +L+S L + L + H +++ +++++ +
Sbjct: 548 ------IEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQAT 601
Query: 285 VKV 287
VK+
Sbjct: 602 VKM 604
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 99/190 (52%), Gaps = 17/190 (8%)
Query: 100 ITLPNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGD 159
+ P +P++R K +EE + H+ ER RR+++N+ LR+++P+ V + D
Sbjct: 393 VVEPEKKPRKRGRKPANGREE----PLNHVEAERQRREKLNQRFYSLRAVVPN--VSKMD 446
Query: 160 QASIIGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYSTSSSRSESEAI 219
+AS++G AI+++ EL+ +LQ + KE L + + + ++ S +
Sbjct: 447 KASLLGDAISYISELKSKLQKAESDKE---------ELQKQIDVMNKEAGNAKSSVKDRK 497
Query: 220 MSNETQNSIADIEVN--MVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADE 277
N+ + + ++EV+ ++ A ++I+ +R K + L+ + L + H +++ ++
Sbjct: 498 CLNQESSVLIEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVND 557
Query: 278 IVLYSLSVKV 287
+++ +VK+
Sbjct: 558 LMIQQATVKM 567
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 76/144 (52%), Gaps = 11/144 (7%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEI 187
++ ER RRK++N+ L +LRS++P + + D+ASI+G AI+++KEL QR+ L E+
Sbjct: 268 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDL--HTEL 323
Query: 188 KENSESGSTLFAEFFAFPQYSTSSSRSESEAIMSNETQNSIAD---IEVNMVESHA-NLK 243
+ S S+L P T S R + E S+ + +EV + E A N+
Sbjct: 324 ESTPPSSSSLHP---LTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVNIH 380
Query: 244 IRSKRRPKQLLKLVSGLQSMRLTI 267
+ RRP LL + L ++ L +
Sbjct: 381 MFCGRRPGLLLSTMRALDNLGLDV 404
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 103 PNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQAS 162
P +P++R K +EE + H+ ER RR+++N+ LR+++P+ V + D+AS
Sbjct: 395 PEKKPRKRGRKPANGREE----PLNHVEAERQRREKLNQRFYSLRAVVPN--VSKMDKAS 448
Query: 163 IIGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYSTSSSRSESEAIMSN 222
++G AI+++ EL+ +LQ + KE + G + S E ++ +
Sbjct: 449 LLGDAISYINELKSKLQQAESDKEEIQKKLDGMSKEGN----NGKGCGSRAKERKSSNQD 504
Query: 223 ETQNSI-ADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLY 281
T +SI +I+V ++ ++++ ++ + + L+ + L + H +++ +++++
Sbjct: 505 STASSIEMEIDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQ 564
Query: 282 SLSVKV 287
+VK+
Sbjct: 565 QATVKM 570
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 15/148 (10%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEI 187
++ ER RRK++N+ L +LRS++P + + D+ASI+G AI+++KEL QR+ L E+
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDL--HNEL 363
Query: 188 KENSESG-----STLFAEFFAFPQYSTSSSRSESEAIMSN--ETQNSIADIEVNMVESHA 240
E++ G S+ F PQ T S R + E S+ + A +EV + E A
Sbjct: 364 -ESTPPGSLPPTSSSFHPLTPTPQ--TLSCRVKEELCPSSLPSPKGQQARVEVRLREGRA 420
Query: 241 -NLKIRSKRRPKQLLKLVSGLQSMRLTI 267
N+ + RRP LL + L ++ L +
Sbjct: 421 VNIHMFCGRRPGLLLATMKALDNLGLDV 448
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 98/199 (49%), Gaps = 31/199 (15%)
Query: 106 RPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIG 165
RP++R K +EE N H+ ER RR+++N+ LRS++P+ + + D+AS++G
Sbjct: 378 RPRKRGRKPANGREEPLN----HVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLG 431
Query: 166 GAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYSTSSSRSESEAIMSNETQ 225
AI+++KEL+++++ I E+ G T S SES I E+
Sbjct: 432 DAISYIKELQEKVK-------IMEDERVG--------------TDKSLSESNTITVEES- 469
Query: 226 NSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSV 285
++++ + +++ S +++ +++ ++++ ++ A++ + ++ +
Sbjct: 470 ---PEVDIQAMNEEVVVRVISPLDSHPASRIIQAMRNSNVSLMEAKLSLAEDTMFHTFVI 526
Query: 286 KVEDDCNLTSGDDIATAVY 304
K + + + + + A Y
Sbjct: 527 KSNNGSDPLTKEKLIAAFY 545
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 104 NNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASI 163
NNRP++R + + E N H+ ER RR+++N+ LRS++P+ + + D+AS+
Sbjct: 414 NNRPRKRGRRPANGRAEALN----HVEAERQRREKLNQRFYALRSVVPN--ISKMDKASL 467
Query: 164 IGGAINFVKELEQRLQSLGARKE 186
+G A++++ EL +L+ + A +E
Sbjct: 468 LGDAVSYINELHAKLKVMEAERE 490
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEI 187
++ ER RRK++N+ L LRSL+P + + D+ASI+G AIN+VKEL+ + L + E+
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVP--RITKLDRASILGDAINYVKELQNEAKEL--QDEL 370
Query: 188 KENSES 193
+ENSE+
Sbjct: 371 EENSET 376
>sp|Q9FXA3|BH095_ARATH Transcription factor bHLH95 OS=Arabidopsis thaliana GN=BHLH95 PE=2
SV=2
Length = 308
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 4/114 (3%)
Query: 93 HPLHQMDITLPNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPD 152
HP ++ T + K+R ++ KN EE HI ER RRK+M + S L +L+P
Sbjct: 40 HPSPEIQTTT-VKKGKKRTKRNDKNHEEESPDHEIHIWTERERRKKMRDMFSKLHALLPQ 98
Query: 153 SYVQRGDQASIIGGAINFVKELEQRLQSLGARK--EIKENSESGSTLFAEFFAF 204
+ D+++I+ A++ +K LEQ LQ L +K +++ +S S +T FA+
Sbjct: 99 -LPPKADKSTIVDEAVSSIKSLEQTLQKLEMQKLEKLQYSSASTNTTPTTTFAY 151
>sp|Q9FLI0|BH120_ARATH Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120
PE=2 SV=2
Length = 204
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Query: 103 PNNRPKRRRAKSRKNQEEIENQR---MTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGD 159
P+N PK+ R +S QE E ++ + H +ER RR++M + LRS +P Y+ +G
Sbjct: 3 PSNNPKKTRHQSHMPQERDETKKEKKLLHRNIERQRRQEMAILFASLRSQLPLKYI-KGK 61
Query: 160 QA--SIIGGAINFVKELEQRLQSLGARKE 186
+A + GA++F+K+ + R++ L AR++
Sbjct: 62 RAMSDHVNGAVSFIKDTQTRIKDLSARRD 90
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 90/166 (54%), Gaps = 6/166 (3%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEI 187
+I ERNRR+++N+ L LRS++P+ + + D+ASII AI++++ L+ + L A
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 188 KENSESGSTLFAEFFAFPQYSTSSSRSESEAIMSNETQNSIADIEVN---MVESHANLKI 244
E++ S F++ F +S+ + + + S + + I +E+ M E + +
Sbjct: 114 LESTPKSSLSFSKDFDRDLLVPVTSK-KMKQLDSGSSTSLIEVLELKVTFMGERTMVVSV 172
Query: 245 RSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVKVEDD 290
+R ++KL +S+ L IL N+T+ ++ +++ ++ +++
Sbjct: 173 TCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEE 218
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKE 186
H+ ER RR+++NE VL+SL+P + R ++ASI+ I ++KEL++R+Q L + +E
Sbjct: 419 HVMSERKRREKLNEMFLVLKSLLPS--IHRVNKASILAETIAYLKELQRRVQELESSRE 475
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKE 186
H+ ER RR+++NE VL+SL+P + R ++ASI+ I ++KEL++R+Q L + +E
Sbjct: 417 HVMSERKRREKLNEMFLVLKSLLPS--IHRVNKASILAETIAYLKELQRRVQELESSRE 473
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 106 RPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIG 165
+P++R K +EE N H+ ER RR+++N+ LR+++P+ + + D+AS++
Sbjct: 303 KPRKRGRKPANGREEALN----HVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLA 356
Query: 166 GAINFVKELEQRLQSLGARKEIKENSESGSTLFAE 200
AI ++ +++++++ K+I + ES AE
Sbjct: 357 DAITYITDMQKKIRVYETEKQIMKRRESNQITPAE 391
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 31/153 (20%)
Query: 126 MTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARK 185
++H+ ER RR+++NE LRS++P +V + D+ SI+G I +V L +R+ L
Sbjct: 362 LSHVVAERRRREKLNEKFITLRSMVP--FVTKMDKVSILGDTIAYVNHLRKRVHEL---- 415
Query: 186 EIKENSESGSTLFAEFFAFPQYSTSSSRSESEAIMSNETQNSIADIEVNMVESHANLKIR 245
EN+ + + + R SE ++EV+++E+ L++R
Sbjct: 416 ---ENTHHEQQ--------HKRTRTCKRKTSE------------EVEVSIIENDVLLEMR 452
Query: 246 SKRRPKQLLKLVSGLQSMRL--TILHFNVTTAD 276
+ R LL ++ L + + T +H +V D
Sbjct: 453 CEYRDGLLLDILQVLHELGIETTAVHTSVNDHD 485
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 97/196 (49%), Gaps = 18/196 (9%)
Query: 115 RKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKEL 174
+K +++E Q ++ ER RRK++N+ LS+LRS++P + + D+ SI+G AI+++KEL
Sbjct: 166 KKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPK--ISKMDRTSILGDAIDYMKEL 223
Query: 175 EQRLQSLGARKEIKENSESG--STLFAEFFAFPQYSTSSSRSESEAIMSNETQNSIADIE 232
++ L ++ NS + S LF + + +E ++ N + E
Sbjct: 224 LDKINKLQDEEQELGNSNNSHHSKLFGDL---------KDLNANEPLVRNSPK-----FE 269
Query: 233 VNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVKVEDDCN 292
++ + + I +P LL V+ L+++ L I ++ + L + + + +
Sbjct: 270 IDRRDEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSLQASCSEGAEQRD 329
Query: 293 LTSGDDIATAVYQLLG 308
+ +DI A+++ G
Sbjct: 330 FITSEDIKQALFRNAG 345
>sp|O81900|DYT1_ARATH Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis
thaliana GN=DYT1 PE=2 SV=1
Length = 207
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 8/197 (4%)
Query: 110 RRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAIN 169
RR + K +EE EN + ++ ER RR++++ L LRS +P V +ASI+ AI
Sbjct: 15 RRKQVTKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVP--IVTNMTKASIVEDAIT 72
Query: 170 FVKELEQRLQS-LGARKEIKENSESGSTLFAEFFAFPQYSTSSSRSESEAIMSNETQNSI 228
++ EL+ +++ L E++E + P+ TS E + + E
Sbjct: 73 YIGELQNNVKNLLETFHEMEEAPPEIDEEQTDPMIKPEVETSDLNEEMKKLGIEENVQL- 131
Query: 229 ADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVKVE 288
+ E LKI +++R K + ++ + I+ ++TT++ +L S SV+ +
Sbjct: 132 ----CKIGERKFWLKIITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNGAILISASVQTQ 187
Query: 289 DDCNLTSGDDIATAVYQ 305
+ C++ D V +
Sbjct: 188 ELCDVEQTKDFLLEVMR 204
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 22/164 (13%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEI 187
++ ERNRR+++N+ L LRS++P+ + + D+AS+I +I++++EL + ++L A EI
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPN--ISKLDKASVIKDSIDYMQELIDQEKTLEA--EI 110
Query: 188 KENSESGSTL-----------FAEFFAFPQYSTSSSRSESEAIMSNETQNSIADIEV--- 233
+E ES STL FAE + RS+ M T+ IEV
Sbjct: 111 RE-LESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEM 169
Query: 234 ---NMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTT 274
M E + I ++ + +++L L+S+ L IL N ++
Sbjct: 170 KVTWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSS 213
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 105 NRPKRRRAKS-RKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASI 163
NR +RA+ +NQ ++ HI ER RR+++ + L +L+P +++ D+AS+
Sbjct: 133 NRKGTKRAQPFSRNQSNAQD----HIIAERKRREKLTQRFVALSALVPG--LKKMDKASV 186
Query: 164 IGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYSTSSSRSESEAIMSNE 223
+G A+ +K L++R+ L +K KE L + + S S E S+
Sbjct: 187 LGDALKHIKYLQERVGELEEQK--KERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSDL 244
Query: 224 TQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSL 283
+ +IEV + +KI +++ L K+++ ++ + + I + +V + ++
Sbjct: 245 ---DLPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSVLNFGPTLDITI 301
Query: 284 SVKVEDDCNLTSGDDIAT 301
K E D ++T D + +
Sbjct: 302 IAKKESDFDMTLMDVVKS 319
>sp|Q9STJ6|BH126_ARATH Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126
PE=2 SV=1
Length = 221
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQA--SIIGGAINFVKELEQRLQSLGARK 185
H +ER RR++M + LR+ +P Y+ +G +A + GA+NF+K+ E R++ L AR+
Sbjct: 47 HRDIERQRRQEMATLFATLRTHLPLKYI-KGKRAVSDHVNGAVNFIKDTEARIKELSARR 105
Query: 186 E 186
+
Sbjct: 106 D 106
>sp|Q9LQ08|BH125_ARATH Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125
PE=2 SV=1
Length = 259
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 116 KNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQ-RGDQASIIGGAINFVKEL 174
KN ++ E+++M H +ER RR++++ LR+L+P Y+Q + + I A+N++K+L
Sbjct: 66 KNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNYIKDL 125
Query: 175 EQRLQSLGARK 185
+ +++ L ++
Sbjct: 126 QIKIKELNEKR 136
>sp|Q9LND0|BH089_ARATH Transcription factor bHLH89 OS=Arabidopsis thaliana GN=BHLH89 PE=2
SV=1
Length = 420
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 74/156 (47%), Gaps = 29/156 (18%)
Query: 131 VERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQS---LGARKEI 187
ER RR + L++L+P+ + D+ASI+G AI+++KEL + + L +K +
Sbjct: 220 TERERRVHFKDRFGDLKNLIPNP--TKNDRASIVGEAIDYIKELLRTIDEFKLLVEKKRV 277
Query: 188 KENSESGSTLFAEFFAFPQYSTSSSRSESEAI---MSNETQNSI-----------ADIEV 233
K+ + G + E F +++SE + + N+ N++ D++V
Sbjct: 278 KQRNREGDDVVDENF----------KAQSEVVEQCLINKKNNALRCSWLKRKSKFTDVDV 327
Query: 234 NMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTILH 269
+++ +KI K++ LL + + + L + H
Sbjct: 328 RIIDDEVTIKIVQKKKINCLLFVSKVVDQLELDLHH 363
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 84/166 (50%), Gaps = 21/166 (12%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEI 187
H+ ER RR++++E L +L+P +++ D+ +I+ AI+ +K+L+++L++L KE
Sbjct: 120 HVLAERKRREKLSEKFIALSALLPG--LKKADKVTILDDAISRMKQLQEQLRTLKEEKEA 177
Query: 188 KENSES-----GSTLFAEFFAFPQYSTSSSRSESEAIMSNETQNSIADIEVNMVESHANL 242
ES S +F F P S S S + E ++ +IE + ++ +
Sbjct: 178 TRQMESMILVKKSKVF--FDEEPNLSCSPS-------VHIEFDQALPEIEAKISQNDILI 228
Query: 243 KIRSKRRPKQLLKLVSGLQSMRLTI-----LHFNVTTADEIVLYSL 283
+I ++ ++ +++ +++ +L I L F +T D VL +
Sbjct: 229 RILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDITVLAQM 274
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 120 EIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQ 179
E ++ H +E+ RR+++NE LR ++P + + D+ SI+ I +++ELE+R+Q
Sbjct: 434 EARDETGNHAVLEKKRREKLNERFMTLRKIIPS--INKIDKVSILDDTIEYLQELERRVQ 491
Query: 180 SLGARKEIKENSESGS 195
L + +E + G+
Sbjct: 492 ELESCRESTDTETRGT 507
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 83/155 (53%), Gaps = 27/155 (17%)
Query: 115 RKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKEL 174
+++ +++E Q ++ ER RRK++N+ LS+LRS++P + + D+ SI+G AI+++KEL
Sbjct: 139 KRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPK--ITKMDRTSILGDAIDYMKEL 196
Query: 175 EQRLQSLGARKEIKENSESGSTLFAEFFAFPQYSTSSSRSESEAIMSNET--QNSIADIE 232
++ L ++ E G S S +++NE+ +NS+ E
Sbjct: 197 LDKINKLQ-----EDEQELG-----------------SNSHLSTLITNESMVRNSLK-FE 233
Query: 233 VNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTI 267
V+ E + ++ I +P ++ VS L+++ L I
Sbjct: 234 VDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEI 268
>sp|Q9LN95|BH055_ARATH Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2
SV=1
Length = 257
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 116 KNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQ-RGDQASIIGGAINFVKEL 174
K +E +N+R H +ER RR++ +LR L+P Y++ + A + A+N++K+L
Sbjct: 67 KGDDEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDL 126
Query: 175 EQRLQSLGARKE 186
+++++ + +++
Sbjct: 127 QKKIKEVSEKRD 138
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSL 181
H+ ER RR+++NE L L +L+P +++ D+A+++ AI +K+L++R++ L
Sbjct: 133 HVLAERKRRQKLNERLIALSALLPG--LKKTDKATVLEDAIKHLKQLQERVKKL 184
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 125 RMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELE---QRLQSL 181
R + ER RR +M + L LRSL+P+ + + D+ASI+G A+ +V+EL+ ++L+S
Sbjct: 129 RSRTLISERRRRGRMKDKLYALRSLVPN--ITKMDKASIVGDAVLYVQELQSQAKKLKSD 186
Query: 182 GARKEIKENSESG 194
A E NS G
Sbjct: 187 IAGLEASLNSTGG 199
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 86/167 (51%), Gaps = 15/167 (8%)
Query: 123 NQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLG 182
++ + H+ ER RR+++N LR+++P+ V + D+ S++ A+ ++ EL+ + +++
Sbjct: 339 DKPLNHVEAERMRREKLNHRFYALRAVVPN--VSKMDKTSLLEDAVCYINELKSKAENVE 396
Query: 183 ARKEIKENSESGSTLFAEFFAFPQYSTSSSRSESEAIMSNETQNS-IADIEVNMVES-HA 240
K E F E + R+ ++ E + S + IEV ++ES A
Sbjct: 397 LEKHAIE------IQFNEL-----KEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDA 445
Query: 241 NLKIRSKRRPKQLLKLVSGLQSMRLTILHFNVTTADEIVLYSLSVKV 287
+++ S++ +L++ L + L + H +++ +++++ +VK+
Sbjct: 446 MVRVESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVKM 492
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 128 HIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKE 186
H E+ RR+++NE LRS++P + + D+ SI+ I ++++L++R+Q L + +E
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPS--ISKIDKVSILDDTIEYLQDLQKRVQELESCRE 462
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 106 RPKRRRAKSRK----NQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQA 161
R +RR+ ++ + +E+ ++H+ E+ RR+++N LR+++P V R D+A
Sbjct: 224 RKRRRKLETTRVAAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPK--VSRMDKA 281
Query: 162 SIIGGAINFVKELEQRLQSL 181
S++ A+++++ L+ ++ L
Sbjct: 282 SLLSDAVSYIESLKSKIDDL 301
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 127 THIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKE 186
H E+ RR ++NE + L+SL+P+S + D+AS++ AI ++K+L+ ++Q L R
Sbjct: 201 VHNLSEKRRRSRINEKMKALQSLIPNS--NKTDKASMLDEAIEYLKQLQLQVQMLTMRNG 258
Query: 187 I 187
I
Sbjct: 259 I 259
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 115 RKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKEL 174
RK + + +N+ T ER RR +NE L+ L+P +GD+ASI+ I+++ EL
Sbjct: 205 RKGRGKRKNKPFT---TERERRCHLNERYEALKLLIPSP--SKGDRASILQDGIDYINEL 259
Query: 175 EQRLQSL 181
+R+ L
Sbjct: 260 RRRVSEL 266
>sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis thaliana GN=BIM2 PE=1 SV=1
Length = 311
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 125 RMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQ 179
R H E+ RR ++NE +LR L+P+S +R D AS + I++V+ L++++Q
Sbjct: 47 RSKHSVTEQRRRSKINERFQILRELIPNSEQKR-DTASFLLEVIDYVQYLQEKVQ 100
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 108 KRRRAKSRKN-QEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGG 166
KR AK R + + I+ Q H E+ RR ++NE + L+ L+P+S + D+AS++
Sbjct: 79 KRSGAKQRNSLKRNIDAQ--FHNLSEKKRRSKINEKMKALQKLIPNS--NKTDKASMLDE 134
Query: 167 AINFVKELEQRLQSLG 182
AI ++K+L+ ++Q+L
Sbjct: 135 AIEYLKQLQLQVQTLA 150
>sp|Q9M1K1|ORG2_ARATH Transcription factor ORG2 OS=Arabidopsis thaliana GN=ORG2 PE=1 SV=1
Length = 253
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 124 QRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASI---IGGAINFVKELEQRLQS 180
+++ H A ER+RRK++N S LRS +P S + + SI + ++ ++ EL+Q+++
Sbjct: 72 KKLNHNASERDRRKKINTLFSSLRSCLPAS--DQSKKLSIPETVSKSLKYIPELQQQVKR 129
Query: 181 LGARKE 186
L +KE
Sbjct: 130 LIQKKE 135
>sp|Q9FYE6|BH101_ARATH Transcription factor bHLH101 OS=Arabidopsis thaliana GN=BHLH101
PE=2 SV=1
Length = 240
Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 124 QRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASI-IGGAINFVKELEQRLQSLG 182
+++ H A ER+RR+++N S LR+L+P S +R + + + ++ E +Q LQ L
Sbjct: 66 KKLNHNASERDRRRKLNALYSSLRALLPLSDQKRKLSIPMTVARVVKYIPEQKQELQRLS 125
Query: 183 ARKE 186
RKE
Sbjct: 126 RRKE 129
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 112 AKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFV 171
A++RK + + H ER RR + N+ + L+ L+P+ Y + D+AS++ AI ++
Sbjct: 218 ARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCY--KDDKASLLDEAIKYM 275
Query: 172 KELEQRLQSL 181
+ L+ ++Q +
Sbjct: 276 RTLQLQVQMM 285
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 111 RAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINF 170
+ KS+ +E+ ++ H ER RR ++N + LR+++P+ Q D+AS++G + +
Sbjct: 81 KPKSKTESKEVAAKK--HSDAERRRRLRINSQFATLRTILPNLVKQ--DKASVLGETVRY 136
Query: 171 VKELEQRLQSLGARKEIKEN 190
EL++ +Q + +++N
Sbjct: 137 FNELKKMVQDIPTTPSLEDN 156
>sp|Q9FLI1|BH036_ARATH Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2
SV=1
Length = 174
Score = 39.3 bits (90), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 124 QRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASI--IGGAINFVKELEQRLQSL 181
++M H ER RR++M + LRSL+P ++ +G +++ + A+N++K L+++++ L
Sbjct: 2 EKMMHRETERQRRQEMASLYASLRSLLPLHFI-KGKRSTSDQVNEAVNYIKYLQRKIKEL 60
Query: 182 GARKE 186
R++
Sbjct: 61 SVRRD 65
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.128 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,305,019
Number of Sequences: 539616
Number of extensions: 4379467
Number of successful extensions: 12952
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 192
Number of HSP's that attempted gapping in prelim test: 12751
Number of HSP's gapped (non-prelim): 322
length of query: 317
length of database: 191,569,459
effective HSP length: 117
effective length of query: 200
effective length of database: 128,434,387
effective search space: 25686877400
effective search space used: 25686877400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)