Query 036538
Match_columns 299
No_of_seqs 191 out of 765
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 04:21:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036538.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036538hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2plc_A PI-PLC, phosphatidylino 100.0 3.5E-36 1.2E-40 276.0 5.5 241 3-272 13-273 (274)
2 3ea1_A 1-phosphatidylinositol 100.0 9.3E-32 3.2E-36 247.8 12.9 143 2-163 19-166 (298)
3 3v1h_A 1-phosphatidylinositol 100.0 1.5E-31 5E-36 247.8 8.8 142 3-163 16-167 (306)
4 3h4x_A Phosphatidylinositol-sp 99.8 4.3E-19 1.5E-23 162.9 10.0 141 3-162 25-196 (339)
5 1djx_A PLC-D1, phosphoinositid 97.9 1.9E-05 6.7E-10 79.5 8.6 137 3-159 167-307 (624)
6 2zkm_X 1-phosphatidylinositol- 97.9 3.4E-05 1.1E-09 79.8 9.6 139 3-159 315-462 (799)
7 3qr0_A Phospholipase C-beta (P 97.7 9.3E-05 3.2E-09 76.6 9.9 138 3-159 326-470 (816)
8 3ohm_B 1-phosphatidylinositol- 97.5 0.00021 7E-09 74.5 8.7 138 3-158 319-465 (885)
9 3rlg_A Sphingomyelin phosphodi 85.8 1.1 3.8E-05 40.7 5.7 70 38-107 39-116 (302)
10 1xx1_A Smase I, sphingomyelina 70.2 6.4 0.00022 34.6 5.7 68 40-108 19-94 (285)
11 1rbl_M Ribulose 1,5 bisphospha 41.8 27 0.00093 26.7 4.0 28 81-108 65-92 (109)
12 1svd_M Ribulose bisphosphate c 41.3 27 0.00094 26.8 3.9 28 81-108 67-94 (110)
13 3zxw_B Ribulose bisphosphate c 38.5 33 0.0011 26.7 4.0 28 81-108 64-91 (118)
14 2pz0_A Glycerophosphoryl diest 36.8 14 0.00049 31.8 2.0 36 34-69 25-61 (252)
15 1vd6_A Glycerophosphoryl diest 36.4 17 0.00058 30.7 2.3 35 35-69 22-57 (224)
16 1bwv_S Rubisco, protein (ribul 36.4 36 0.0012 27.2 4.0 28 81-108 59-86 (138)
17 2otd_A Glycerophosphodiester p 36.1 18 0.0006 31.1 2.4 35 35-69 21-56 (247)
18 3ks6_A Glycerophosphoryl diest 35.8 17 0.00059 31.3 2.3 34 36-69 18-52 (250)
19 1bxn_I Rubisco, protein (ribul 35.7 36 0.0012 27.2 3.9 28 81-108 59-86 (139)
20 1zcc_A Glycerophosphodiester p 35.1 19 0.00064 31.1 2.4 35 35-69 16-51 (248)
21 3qvq_A Phosphodiesterase OLEI0 34.7 19 0.00065 31.1 2.4 35 35-69 24-59 (252)
22 3m91_B Prokaryotic ubiquitin-l 34.5 26 0.00088 22.3 2.3 26 82-107 15-40 (44)
23 2o55_A Putative glycerophospho 34.3 19 0.00066 31.0 2.4 32 38-69 26-58 (258)
24 4f0h_B Ribulose bisphosphate c 34.1 41 0.0014 26.8 4.0 28 81-108 59-86 (138)
25 3no3_A Glycerophosphodiester p 33.9 20 0.00068 30.8 2.3 68 36-108 22-106 (238)
26 2dt7_A Splicing factor 3A subu 33.6 23 0.0008 21.8 2.0 21 81-101 13-33 (38)
27 1gk8_I Ribulose bisphosphate c 32.9 44 0.0015 26.7 4.0 28 81-108 84-111 (140)
28 1wdd_S Ribulose bisphosphate c 32.0 47 0.0016 26.1 4.0 26 81-106 77-102 (128)
29 1o1z_A GDPD, glycerophosphodie 30.0 33 0.0011 29.2 3.2 36 34-69 26-62 (234)
30 2k7r_A Primosomal protein DNAI 29.8 19 0.00065 27.1 1.3 13 89-101 33-45 (106)
31 3l12_A Putative glycerophospho 26.7 30 0.001 30.8 2.3 35 35-69 32-67 (313)
32 3ch0_A Glycerophosphodiester p 26.3 39 0.0013 29.2 2.9 35 35-69 23-58 (272)
33 3mz2_A Glycerophosphoryl diest 24.9 33 0.0011 30.5 2.2 35 35-69 47-82 (292)
34 2oog_A Glycerophosphoryl diest 24.0 37 0.0013 29.8 2.3 32 38-69 41-74 (287)
35 1ydy_A Glycerophosphoryl diest 23.5 37 0.0013 30.9 2.3 35 35-69 45-80 (356)
No 1
>2plc_A PI-PLC, phosphatidylinositol-specific phospholipase C; hydrolase, phospholipid degradation, virulence factor of human pathogen; 2.00A {Listeria monocytogenes} SCOP: c.1.18.2 PDB: 1aod_A*
Probab=100.00 E-value=3.5e-36 Score=275.98 Aligned_cols=241 Identities=17% Similarity=0.239 Sum_probs=153.5
Q ss_pred CccCCCcceeccCccCCCCCCCcccccccccCCCccccHHHHHhcCcceeecccceeCCceEEEecCCCCCCCCCCcccc
Q 036538 3 GLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDFQNDIWLCHSFDGRCYGSTTAFQP 82 (299)
Q Consensus 3 ~lpl~~lt~pGTHNS~~~~~~~~~~g~~~~~~~nQ~~si~~QL~~GVR~ldlrv~~~~~~l~~~H~~~~~C~~~~~~~~~ 82 (299)
++||++|+||||||||++..+.. ..+...++.||+.+|++||++|||+||||++ +++++||+. |.. ..+
T Consensus 13 ~~~l~~l~ipGtHdS~~~~~~~~-~~~~~~~~~~Q~~~i~~QL~~GvR~ldlr~~---~~~~~~H~~---~~~----~~~ 81 (274)
T 2plc_A 13 TTNLAALSIPGTHDTMSYNGDIT-WTLTKPLAQTQTMSLYQQLEAGIRYIDIRAK---DNLNIYHGP---IFL----NAS 81 (274)
T ss_dssp TCBGGGSEEEEETTTTTTSCSHH-HHHTHHHHCCCSSCHHHHHHTTCCEEEEEEC---TTSEEEETT---EEE----EEE
T ss_pred CCeeeeeeeeeecchhhccCCCc-cccccccccCCCcCHHHHHHhCCcEEEEEEC---CcEEEEEcC---CCC----CCC
Confidence 68999999999999999865311 0111247899999999999999999999999 789999997 532 368
Q ss_pred HHHHHHHHHHHHhcCCCCeEEEeecc-cccCcchh----hhhhhccCcCceeeeCCCCCCCCCCCCcHHHHHhcCcEEEE
Q 036538 83 AKNVLEEVQAFLEANPAEIVTLFIED-YVTSPNGL----TKVFDAADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLVV 157 (299)
Q Consensus 83 l~~~L~eI~~fL~~nP~EvViL~l~d-~~~~~~~l----~~~f~~~~l~~~~~~p~~~~~~~~~wPTL~el~~~gkrvvv 157 (299)
++++|.+|++||++||+|||||.+++ +. ....+ ..++ +++++++|+|+.. .....||||+|| +|||||+
T Consensus 82 ~~~~L~~i~~fL~~~P~EvVil~~~~~~~-~~~~~~~~~~~l~--~~l~~~~~~~~~~-~~~~~~pTL~e~--rGK~vlv 155 (274)
T 2plc_A 82 LSGVLETITQFLKKNPKETIIMRLKDEQN-SNDSFDYRIQPLI--NIYKDYFYTTPRT-DTSNKIPTLKDV--RGKILLL 155 (274)
T ss_dssp HHHHHHHHHHHHHHSTTCCEEEEEEETTC-SCSHHHHHHHHHH--HHTGGGBCEEESS-CCCCCCCBTTTT--TTCEEEE
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEEeCCC-CCCcHHHHHHHHH--HHhhceeecCccc-ccCCCCCCHHHh--CCCEEEE
Confidence 99999999999999999999999996 43 22222 2233 5789999987533 234689999999 6999999
Q ss_pred EEeCCccc---cccCccccc---ceeeeCCCCCCCC-CcC---CCC-CCCCCCCCCccCccceeeccCCCC---CC-ccc
Q 036538 158 FTSKSAKE---ASEGIAYQW---RYVVENQYGDGGM-KVG---SCP-NRAESSPMNTRSKSLVLVNYFPDM---PV-LPL 222 (299)
Q Consensus 158 f~~~~~~~---~~~~~~~~~---~~~~e~~~~~~~~-~~~---~C~-~R~~~~~~~~~~~~l~l~Nhf~~~---P~-~~~ 222 (299)
+....... ....+.+.| ....++.|...+. ..+ .+. .+.. .....+.+||.-.. +. +..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~w~~~~~~iqD~y~~~~~~~K~~~i~~~l~~a~------~~~~~~~iN~~S~~~~~~~p~~~ 229 (274)
T 2plc_A 156 SENHTKKPLVINSRKFGMQFGAPNQVIQDDYNGPSVKTKFKEIVQTAYQAS------KADNKLFLNHISATSLTFTPRQY 229 (274)
T ss_dssp EESTTCSCEEETTEEESEETTCTTEEEECCCBSCCHHHHHHHHHHHHHHHH------HCSSSEEEEECCCBCSSSCHHHH
T ss_pred EeCCCCCCCCcCcccccccCCCCCccccccCCCCcHHHHHHHHHHHHHHhh------cCCCCeEEEEEcccCCCCCHHHH
Confidence 87542110 000000011 1113444432210 000 011 1110 01223566774431 11 122
Q ss_pred cccCCChhHHHHHHHhHhhhCCCCceEEEEeccccCCCCChHHHHHHhcC
Q 036538 223 ACKDNSAPLASMVSTCYEAAGKRWPNFIAVDFYKSSNGRGAPEAVDEVNG 272 (299)
Q Consensus 223 a~~~n~~~L~~~~~~C~~~~g~r~pNfv~vDf~~~~~~g~~~~~v~~lN~ 272 (299)
|...|. .+...+..|... +.+.+|||++||++ ++++++|+++|.
T Consensus 230 A~~~n~-~l~~~l~~~~~~-~~~~~gIV~~DFv~----~~~i~~vI~~N~ 273 (274)
T 2plc_A 230 AAALNN-KVEQFVLNLTSE-KVRGLGILIMDFPE----KQTIKNIIKNNK 273 (274)
T ss_dssp HHHHHH-HHHHHHHHHHHT-TCCCCEEEEESSCC----HHHHHHHHTTSC
T ss_pred HHHHhH-HHHHHHHHHhcC-CCCcccEEEEeCCC----chhHHHHHhccC
Confidence 222222 122333334433 34579999999996 368999999996
No 2
>3ea1_A 1-phosphatidylinositol phosphodiesterase; phosphatidylinositol-specific phospholipase C, PI-PLC, dimer, interfacially impaired; 1.75A {Bacillus thuringiensis} SCOP: c.1.18.2 PDB: 3ea2_A* 3ea3_A 1t6m_A 2or2_A 1gym_A* 1ptd_A 1ptg_A* 7ptd_A 2ptd_A 4ptd_A 3ptd_A 6ptd_A 5ptd_A
Probab=99.97 E-value=9.3e-32 Score=247.80 Aligned_cols=143 Identities=20% Similarity=0.235 Sum_probs=107.9
Q ss_pred CCccCCCcceeccCccCCCCCCCcccccccccCCCccccHHHHHhcCcceeeccccee-CCceEEEecCCCCCCCCCCcc
Q 036538 2 KGLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDF-QNDIWLCHSFDGRCYGSTTAF 80 (299)
Q Consensus 2 ~~lpl~~lt~pGTHNS~~~~~~~~~~g~~~~~~~nQ~~si~~QL~~GVR~ldlrv~~~-~~~l~~~H~~~~~C~~~~~~~ 80 (299)
.++||++|+||||||||++....+. ...|+.||+.+|++||++||||||||++.. ++++++||+. |.+ .
T Consensus 19 d~~pl~~lsiPGTHdS~a~~~~~~~---~~~~~~tQ~~si~~QL~~GIR~lDlRv~~~~~~~l~~~Hg~---~~~----~ 88 (298)
T 3ea1_A 19 DNIPLARISIPGTHDSGTFKLQNPI---KQVWGMTQEYDFRYQMDHGARIFDIRGRLTDDNTIVLHHGP---LYL----Y 88 (298)
T ss_dssp TTSBTTTSCEEEETTTTCTTCCSHH---HHHHHCCCSSCHHHHHHTTCCEEEEEEEECTTSCEEEEETT---EEE----E
T ss_pred cCCeeeeeeeccccccccccCCCch---hhhcccCccccHHHHHhcCCeEEEEEeEecCCCcEEEECCc---ccc----c
Confidence 3789999999999999998754211 124789999999999999999999999876 4689999997 654 3
Q ss_pred ccHHHHHHHHHHHHhcCCCCeEEEeecc-ccc---CcchhhhhhhccCcCceeeeCCCCCCCCCCCCcHHHHHhcCcEEE
Q 036538 81 QPAKNVLEEVQAFLEANPAEIVTLFIED-YVT---SPNGLTKVFDAADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLV 156 (299)
Q Consensus 81 ~~l~~~L~eI~~fL~~nP~EvViL~l~d-~~~---~~~~l~~~f~~~~l~~~~~~p~~~~~~~~~wPTL~el~~~gkrvv 156 (299)
.+++++|.+|++||++||+|||||+|++ +.. ....|...+...-+.+..+. ....||||+|+| || ||
T Consensus 89 ~~l~dvL~ei~~FL~~hP~EvVil~ik~e~~~~~~~~~~f~~~~~~~~~~~~~~~------~~~~~ptLge~R--GK-iv 159 (298)
T 3ea1_A 89 VTLHEFINEAKQFLKDNPSETIIMSLKKEYEDMKGAEGSFSSTFEKNYFVDPIFL------KTEGNIKLGDAR--GK-IV 159 (298)
T ss_dssp EEHHHHHHHHHHHHHHCTTCCEEEEEEECSCCCTTCSSCHHHHHHHHTTTSTTBC------CCCSSCBHHHHT--TS-EE
T ss_pred CCHHHHHHHHHHHHHHCCCeEEEEEEEecCCCcCcchHHHHHHHHHHHhcCcccc------cCCCCCcHHHhc--CC-EE
Confidence 6899999999999999999999999985 421 12245555532222222221 235789999996 76 67
Q ss_pred EEEeCCc
Q 036538 157 VFTSKSA 163 (299)
Q Consensus 157 vf~~~~~ 163 (299)
++-+...
T Consensus 160 ll~rf~~ 166 (298)
T 3ea1_A 160 LLKRYSG 166 (298)
T ss_dssp EEEESSC
T ss_pred EEEecCC
Confidence 7777654
No 3
>3v1h_A 1-phosphatidylinositol phosphodiesterase; PI-cation, TIM barrel, phospholipase, lyase; HET: INS; 1.90A {Staphylococcus aureus subsp} PDB: 4f2b_A* 4f2u_A* 4f2t_A 3v18_A 3v16_A*
Probab=99.97 E-value=1.5e-31 Score=247.81 Aligned_cols=142 Identities=16% Similarity=0.256 Sum_probs=110.0
Q ss_pred CccCCCcceeccCccCCCCCCCcccccccccCCCccccHHHHHhcCcceeeccccee-CCceEEEecCCCCCCCCCCccc
Q 036538 3 GLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDF-QNDIWLCHSFDGRCYGSTTAFQ 81 (299)
Q Consensus 3 ~lpl~~lt~pGTHNS~~~~~~~~~~g~~~~~~~nQ~~si~~QL~~GVR~ldlrv~~~-~~~l~~~H~~~~~C~~~~~~~~ 81 (299)
++||++|+||||||||++....+. ...|+.||+.+|++||++||||||||++.. ++.+++||+. |.+ ..
T Consensus 16 ~~~l~~lsiPGTHdS~~~~~~~p~---~~~~~~tQ~~si~~QL~~GVR~lDlRv~~~~~~~l~~~Hg~---~~~----~~ 85 (306)
T 3v1h_A 16 GKHLTEINIPGSHDSGSFTLKDPV---KSVWAKTQDKDYLTQMKSGVRFFDIRGRASADNMISVHHGM---VYL----HH 85 (306)
T ss_dssp TSBGGGSCEEEETTGGGGGCCCHH---HHHHHCCCSSCHHHHHHTTCCEEEEEEEEEETTEEEEEETT---EEE----EE
T ss_pred CCEeecceeccccchhhccCCCcc---cchhhccCCCCHHHHHHhCcceEEEEeeecCCCcEEEEccC---ccc----CC
Confidence 689999999999999998644211 123789999999999999999999999864 6789999997 654 37
Q ss_pred cHHHHHHHHHHHHhcCCCCeEEEeecccccC----cchhhhhhhc-----cCcCceeeeCCCCCCCCCCCCcHHHHHhcC
Q 036538 82 PAKNVLEEVQAFLEANPAEIVTLFIEDYVTS----PNGLTKVFDA-----ADLRKYWFPVSSMPKNGESWPTVDDMIHEN 152 (299)
Q Consensus 82 ~l~~~L~eI~~fL~~nP~EvViL~l~d~~~~----~~~l~~~f~~-----~~l~~~~~~p~~~~~~~~~wPTL~el~~~g 152 (299)
+++++|.+|++||++||+|||||+|+++... ...|.++|.. .+..+++|.. ...+|||+|+| |
T Consensus 86 ~l~dvL~~i~~FL~~hP~EvVil~l~~e~~~~~~~~~~f~~~~~~~~~~~~~~~~~~y~~------~~~~PtLge~R--G 157 (306)
T 3v1h_A 86 ELGKFLDDAKYYLSAYPNETIVMSMKKDYDSDSKVTKTFEEIFREYYYNNPQYQNLFYTG------SNANPTLKETK--G 157 (306)
T ss_dssp EHHHHHHHHHHHHHHSTTCCEEEEEEECSCCCTTCCSCHHHHHHHHTTTCGGGTTTBCCC------SCSSCBHHHHT--T
T ss_pred cHHHHHHHHHHHHHHCCCeEEEEEEEeCCCCCccchHHHHHHHHHHhhcCcccccceecC------CCCCCchHHhc--C
Confidence 8999999999999999999999999954311 2356666642 2334556532 23689999997 7
Q ss_pred cEEEEEEeCCc
Q 036538 153 QRLVVFTSKSA 163 (299)
Q Consensus 153 krvvvf~~~~~ 163 (299)
| ||++-+.+.
T Consensus 158 K-Ivll~rf~~ 167 (306)
T 3v1h_A 158 K-IVLFNRMGG 167 (306)
T ss_dssp S-EEEEEESSS
T ss_pred c-EEEEEecCC
Confidence 7 666667654
No 4
>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A
Probab=99.78 E-value=4.3e-19 Score=162.90 Aligned_cols=141 Identities=18% Similarity=0.293 Sum_probs=98.5
Q ss_pred CccCCCcceeccCccCCCCCCCcccccccccCCCccccHHHHHhcCcceeeccccee--CCceEEEecC----CCCCCCC
Q 036538 3 GLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDF--QNDIWLCHSF----DGRCYGS 76 (299)
Q Consensus 3 ~lpl~~lt~pGTHNS~~~~~~~~~~g~~~~~~~nQ~~si~~QL~~GVR~ldlrv~~~--~~~l~~~H~~----~~~C~~~ 76 (299)
+.||++++++|+||||.... ..+|.+||+.|||.||||||.. .+++.+||+. ...|.+-
T Consensus 25 ~~pls~~T~~g~HNSY~~g~---------------~~~i~~qLd~GVR~LELDIw~n~~~g~~~V~Hg~~l~~~nnC~~a 89 (339)
T 3h4x_A 25 ATTYGTSTSVGVHNAYEKEK---------------YRYFADALDSGAALLELDLWSNALGRSWRVSHSNPLGNNSNCEGA 89 (339)
T ss_dssp CCBTTSEEEEEETTTTCTTT---------------CSSHHHHHTTCCSEEEEEEESSSSSSSCEECSSSCSSCCSSCCCC
T ss_pred cCccccceEeeccccccccC---------------cccHHHHHHhCCCEEEEEeecCCCCCCeEEeCCCccccccccccc
Confidence 68999999999999998642 3589999999999999999975 6689999975 1247530
Q ss_pred ------C--CccccHHHHHHHHHHHHhcCCCCe-EEEeeccccc-------CcchhhhhhhccCcCceeeeCCCC-----
Q 036538 77 ------T--TAFQPAKNVLEEVQAFLEANPAEI-VTLFIEDYVT-------SPNGLTKVFDAADLRKYWFPVSSM----- 135 (299)
Q Consensus 77 ------~--~~~~~l~~~L~eI~~fL~~nP~Ev-ViL~l~d~~~-------~~~~l~~~f~~~~l~~~~~~p~~~----- 135 (299)
. +...+|.++|++||+|+++||+|+ |+|.+++... .++.+.+.++ +-|++.+|.|+..
T Consensus 90 s~~~dL~t~Tt~~tL~~CL~~IK~WsdahPsh~PViI~LE~K~t~~~~~g~~p~~lDaeI~-~vFGd~L~tPddvrG~~~ 168 (339)
T 3h4x_A 90 ANASELRTKSRDQDFAGCLSDMRAWHDAHPGHRPILLKIEMKDGFNAKGGRGPAEFDALIR-QKLGDAVYGPGDLTGGHA 168 (339)
T ss_dssp SSGGGTTCSCCCCCHHHHHHHHHHHHHHSTTCCCEEEEEEETTCCBGGGTBSHHHHHHHHH-HHHGGGBCCHHHHHTTSS
T ss_pred ccccccccCCCCcCHHHHHHHHHHHHHhCCCCCceEEEEecccCcccccCcCHHHHHHHHH-HHhccceEcchhhccccc
Confidence 1 123689999999999999999996 5566663210 1233443333 2236777876421
Q ss_pred C----CCCCCCCcHHHHHhcCcEEEEEEeCC
Q 036538 136 P----KNGESWPTVDDMIHENQRLVVFTSKS 162 (299)
Q Consensus 136 ~----~~~~~wPTL~el~~~gkrvvvf~~~~ 162 (299)
. .....||||++++ || ||+..+.+
T Consensus 169 TL~eAVla~GWPSl~slR--GK-Vlf~Ld~G 196 (339)
T 3h4x_A 169 TADEAVRAGGWPSRADLA--GK-FLFELIPG 196 (339)
T ss_dssp SHHHHHHHHCCCBTGGGT--TC-EEEEEEEC
T ss_pred CHHHHHhcCCCCChHHhC--CC-EEEEEeCC
Confidence 0 0124699999996 76 55455544
No 5
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=97.93 E-value=1.9e-05 Score=79.50 Aligned_cols=137 Identities=18% Similarity=0.211 Sum_probs=91.7
Q ss_pred CccCCCcceeccCccCCCCCCCcccccccccCCCccccHHHHHhcCcceeeccccee-CCceEEEecCCCCCCCCCCccc
Q 036538 3 GLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDF-QNDIWLCHSFDGRCYGSTTAFQ 81 (299)
Q Consensus 3 ~lpl~~lt~pGTHNS~~~~~~~~~~g~~~~~~~nQ~~si~~QL~~GVR~ldlrv~~~-~~~l~~~H~~~~~C~~~~~~~~ 81 (299)
+.||+++=|-.+||+|-.. +- +.+..=.....+-|..|+|-++||++.. +++..++||. . ++...
T Consensus 167 ~~pLs~Yfi~SsHNTYL~G-~Q-------l~~~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~----t--lts~i 232 (624)
T 1djx_A 167 DQPLSHYLVSSSHNTYLLE-DQ-------LTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGY----T--FTSKI 232 (624)
T ss_dssp TSCGGGEEECEESSTTBSS-CS-------SSCCBCHHHHHHHHHTTCCEEEEEEECCGGGCCEECCTT----S--CCCCE
T ss_pred cCcchhheeecccchhhhc-Cc-------ccCCcCHHHHHHHHHhCCcEEEEEeecCCCCCeEEecCC----c--ccccc
Confidence 4699999999999998763 21 1222223567889999999999999874 5678899985 1 34457
Q ss_pred cHHHHHHHHHHHHhcCCCCeEEEeecccccCcc---hhhhhhhccCcCceeeeCCCCCCCCCCCCcHHHHHhcCcEEEEE
Q 036538 82 PAKNVLEEVQAFLEANPAEIVTLFIEDYVTSPN---GLTKVFDAADLRKYWFPVSSMPKNGESWPTVDDMIHENQRLVVF 158 (299)
Q Consensus 82 ~l~~~L~eI~~fL~~nP~EvViL~l~d~~~~~~---~l~~~f~~~~l~~~~~~p~~~~~~~~~wPTL~el~~~gkrvvvf 158 (299)
+|.+++..|+++--..-.=-|||.|++.- +++ .+.++++ .-|+++|+.+.... ....+|+.++|+ | ||||=
T Consensus 233 ~f~~v~~~I~~~AF~~s~yPvilslE~Hc-~~~qQ~~ma~~~~-~~~gd~L~~~~~~~-~~~~lpsp~~Lk--~-kilik 306 (624)
T 1djx_A 233 LFCDVLRAIRDYAFKASPYPVILSLENHC-SLEQQRVMARHLR-AILGPILLDQPLDG-VTTSLPSPEQLK--G-KILLK 306 (624)
T ss_dssp EHHHHHHHHHHHTTTSCSSCEEEEEEEEC-CHHHHHHHHHHHH-HHHGGGBCCSCCTT-CCSSCCCTTTTT--T-CEEEE
T ss_pred cHHHHHHHHHHhcccCCCCCEEEEecccC-CHHHHHHHHHHHH-HHHhhhhcCCCccC-CcCCCCCHHHHC--C-CEEEE
Confidence 89999999999754332224889998654 222 1223332 23488888643211 236789999995 4 46654
Q ss_pred E
Q 036538 159 T 159 (299)
Q Consensus 159 ~ 159 (299)
.
T Consensus 307 ~ 307 (624)
T 1djx_A 307 G 307 (624)
T ss_dssp E
T ss_pred e
Confidence 3
No 6
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=97.88 E-value=3.4e-05 Score=79.84 Aligned_cols=139 Identities=19% Similarity=0.266 Sum_probs=92.2
Q ss_pred CccCCCcceeccCccCCCCCCCcccccccccCCCccccHHHHHhcCcceeeccccee---CCceEEEecCCCCCCCCCCc
Q 036538 3 GLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDF---QNDIWLCHSFDGRCYGSTTA 79 (299)
Q Consensus 3 ~lpl~~lt~pGTHNS~~~~~~~~~~g~~~~~~~nQ~~si~~QL~~GVR~ldlrv~~~---~~~l~~~H~~~~~C~~~~~~ 79 (299)
+.||+++=|-.|||+|-...- +.+..=...+.+-|..|+|-++||++.. +++..++||. . ++.
T Consensus 315 ~~PLshYfI~SSHNTYL~g~Q--------l~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~ep~v~HG~----T--lts 380 (799)
T 2zkm_X 315 TQPLNHYFINSSHNTYLTAGQ--------FSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGF----T--MTT 380 (799)
T ss_dssp CSCGGGEEECBBSSTTBSSCS--------SSSCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEECCTT----S--SCC
T ss_pred CCchhhheEeccccceeecCc--------ccCcccHHHHHHHHHhCCCEEEEEeecCCCCCCCCEEEeCC----c--ccc
Confidence 579999999999999875321 1222223478889999999999999875 4678899985 1 344
Q ss_pred cccHHHHHHHHHHHHhcCCCCeEEEeecccccCcc---hhhhhhhccCcCceeeeCCCC--C-CCCCCCCcHHHHHhcCc
Q 036538 80 FQPAKNVLEEVQAFLEANPAEIVTLFIEDYVTSPN---GLTKVFDAADLRKYWFPVSSM--P-KNGESWPTVDDMIHENQ 153 (299)
Q Consensus 80 ~~~l~~~L~eI~~fL~~nP~EvViL~l~d~~~~~~---~l~~~f~~~~l~~~~~~p~~~--~-~~~~~wPTL~el~~~gk 153 (299)
..+|.++|..|++.--..-.=-|||.|++.-.+++ .+.+.++ .-||++|+.+... + ......|+.++|+ |
T Consensus 381 ~i~f~~v~~~I~~~AF~~S~yPvIlslE~Hc~s~~qQ~~ma~~~~-~~~Gd~L~~~~~~~~~~~~~~~lPSP~~Lk--~- 456 (799)
T 2zkm_X 381 DIFFKEAIEAIAESAFKTSPYPIILSFENHVDSPRQQAKMAEYCR-TIFGDMLLTEPLEKFPLKPGVPLPSPEDLR--G- 456 (799)
T ss_dssp CEEHHHHHHHHHHHTTSSCCSCEEEEEEECCCCHHHHHHHHHHHH-HHHGGGBCCSCCTTSCSSTTCCCCCTTTTT--T-
T ss_pred cccHHHHHHHHHHhcccCCCCCEEEEccccCCCHHHHHHHHHHHH-HHhhhheecCCccccccccCCCCCCHHHHC--C-
Confidence 57899999999986543322238899986541121 2223332 2348888854321 1 1235789999995 4
Q ss_pred EEEEEE
Q 036538 154 RLVVFT 159 (299)
Q Consensus 154 rvvvf~ 159 (299)
||||-.
T Consensus 457 kIlik~ 462 (799)
T 2zkm_X 457 KILIKN 462 (799)
T ss_dssp CEEEEC
T ss_pred CEEEEe
Confidence 466543
No 7
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=97.73 E-value=9.3e-05 Score=76.57 Aligned_cols=138 Identities=20% Similarity=0.203 Sum_probs=91.6
Q ss_pred CccCCCcceeccCccCCCCCCCcccccccccCCCccccHHHHHhcCcceeeccccee-CCceEEEecCCCCCCCCCCccc
Q 036538 3 GLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDF-QNDIWLCHSFDGRCYGSTTAFQ 81 (299)
Q Consensus 3 ~lpl~~lt~pGTHNS~~~~~~~~~~g~~~~~~~nQ~~si~~QL~~GVR~ldlrv~~~-~~~l~~~H~~~~~C~~~~~~~~ 81 (299)
+.||+++=|-.|||+|-...- +.+..=......-|..|+|-++||++.. +++-.++||. - ++...
T Consensus 326 ~~Pl~~YfI~sshntyL~g~q--------l~g~ss~~~y~~aL~~gcRcvEld~wdg~~~ePvv~HG~---T---lts~i 391 (816)
T 3qr0_A 326 KLTLAAYYINSSHNTYLTGHQ--------LTGKSSVEIYRQVLLTGCRCLELDCWDGKDGEPIITHGF---T---MCTEV 391 (816)
T ss_dssp CSCGGGEEECBBSSTTBSSCT--------TTSCBCSHHHHHHHHTTCCEEEEEEECCTTSSCEECCTT---S---SCCCE
T ss_pred CCchhhheecccccchhcccc--------ccCcccHHHHHHHHHhCCcEEEEEEecCCCCCceEccCC---c---ccccc
Confidence 479999999999999875321 1122223467788999999999999875 4678899985 1 34457
Q ss_pred cHHHHHHHHHHHHhcCCCCeEEEeecccccCcc---hhhhhhhccCcCceeeeCCCC--C-CCCCCCCcHHHHHhcCcEE
Q 036538 82 PAKNVLEEVQAFLEANPAEIVTLFIEDYVTSPN---GLTKVFDAADLRKYWFPVSSM--P-KNGESWPTVDDMIHENQRL 155 (299)
Q Consensus 82 ~l~~~L~eI~~fL~~nP~EvViL~l~d~~~~~~---~l~~~f~~~~l~~~~~~p~~~--~-~~~~~wPTL~el~~~gkrv 155 (299)
+|.++++.|+++--..-.=-|||.|++.- +++ .+.+.++ .-|++.|+.+... + ......|+.++|+ | ||
T Consensus 392 ~f~~v~~~I~~~AF~~S~yPvIlslE~Hc-~~~qQ~~ma~~~~-~~~Gd~L~~~~~~~~~~~~~~~lpsP~~Lk--~-kI 466 (816)
T 3qr0_A 392 LFKDVVYAIAESAFKVSDYPVILSFENHC-SVAQQKLLAQYCN-EAFGELLLDKPIDGHPLKPGVPLPTPYDLR--K-KI 466 (816)
T ss_dssp EHHHHHHHHHHHTTSSCCSCEEEEEEECC-CHHHHHHHHHHHH-HHHGGGBCCSCCTTCCSSTTCCCCCTTTTT--T-CE
T ss_pred cHHHHHHHHHHhcccCCCCCEEEEEecCC-CHHHHHHHHHHHH-HHhhhhhccCCccccccccCCcCCCHHHHc--C-CE
Confidence 89999999998765433334888998654 221 1222222 2348888853211 1 1235789999995 4 46
Q ss_pred EEEE
Q 036538 156 VVFT 159 (299)
Q Consensus 156 vvf~ 159 (299)
||-.
T Consensus 467 lik~ 470 (816)
T 3qr0_A 467 LIKN 470 (816)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 6554
No 8
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=97.50 E-value=0.00021 Score=74.53 Aligned_cols=138 Identities=21% Similarity=0.304 Sum_probs=90.6
Q ss_pred CccCCCcceeccCccCCCCCCCcccccccccCCCccccHHHHHhcCcceeeccccee---CCceEEEecCCCCCCCCCCc
Q 036538 3 GLPFNRYSWLVTHNSFAKLGAKSAFGHLALAPENQQDSITNQLHNGVRGLMLDMYDF---QNDIWLCHSFDGRCYGSTTA 79 (299)
Q Consensus 3 ~lpl~~lt~pGTHNS~~~~~~~~~~g~~~~~~~nQ~~si~~QL~~GVR~ldlrv~~~---~~~l~~~H~~~~~C~~~~~~ 79 (299)
+.||+++=|-.+||+|-...- +.+..=......-|..|+|-++||++.. +++..++||. - ++.
T Consensus 319 ~~Pls~YfI~ssHNtYL~g~Q--------l~~~ss~~~y~~aL~~gcRcvEld~wdg~~~~~ep~v~hg~---t---~t~ 384 (885)
T 3ohm_B 319 TQPLSAYFINSSHNTYLTAGQ--------LAGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFITHGF---T---MTT 384 (885)
T ss_dssp CSCGGGEEECCBSSTTBSSCS--------SEECBCSHHHHHHHHTTCCEEEEEEECCCSSSCCCEECSTT---S---EEC
T ss_pred Ccchhhheeeccccceecccc--------ccCcCcHHHHHHHHHhCCCEEEEEeeCCCCCCCCCEEeeCC---c---ccC
Confidence 479999999999999875321 1112223457788999999999999864 5689999985 1 234
Q ss_pred cccHHHHHHHHHHHHhcCCCCeEEEeecccccCc---chhhhhhhccCcCceeeeCCC--CC-CCCCCCCcHHHHHhcCc
Q 036538 80 FQPAKNVLEEVQAFLEANPAEIVTLFIEDYVTSP---NGLTKVFDAADLRKYWFPVSS--MP-KNGESWPTVDDMIHENQ 153 (299)
Q Consensus 80 ~~~l~~~L~eI~~fL~~nP~EvViL~l~d~~~~~---~~l~~~f~~~~l~~~~~~p~~--~~-~~~~~wPTL~el~~~gk 153 (299)
..+|.+++..|+++--..-.=-|||.|++.-.++ ..+.++++ .-|+++|+.+.. .+ ......|+.++|+ ||
T Consensus 385 ~i~f~~v~~~i~~~af~~s~yPvilsle~h~~~~~qq~~~a~~~~-~~~g~~L~~~~~~~~~~~~~~~lpsp~~Lk--~k 461 (885)
T 3ohm_B 385 EVPLRDVLEAIAETAFKTSPYPVILSFENHVDSAKQQAKMAEYCR-SIFGDALLIEPLDKYPLAPGVPLPSPQDLM--GR 461 (885)
T ss_dssp CEEHHHHHHHHHHHTTSSCCSCEEEEEEEECCCTTHHHHHHHHHH-HHHGGGBCCSCBTTBCSSSSCCCCCTTTTT--TC
T ss_pred cccHHHHHHHHHHhhccCCCCCEEEEEecCCCCHHHHHHHHHHHH-HHhhHhhccCcccccccccCCcCCCHHHHc--Cc
Confidence 5789999999999765432334888888543122 12233332 334888885321 11 1235789999995 44
Q ss_pred EEEEE
Q 036538 154 RLVVF 158 (299)
Q Consensus 154 rvvvf 158 (299)
|||-
T Consensus 462 -ilik 465 (885)
T 3ohm_B 462 -ILVK 465 (885)
T ss_dssp -EEEE
T ss_pred -EEEE
Confidence 5554
No 9
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=85.83 E-value=1.1 Score=40.74 Aligned_cols=70 Identities=10% Similarity=0.168 Sum_probs=46.0
Q ss_pred cccHHHHHhcCcceeeccccee-CCc-eEEEecCCCCCCCCCCccccHHHHHHHHHHHHh----cCCCCe--EEEeec
Q 036538 38 QDSITNQLHNGVRGLMLDMYDF-QND-IWLCHSFDGRCYGSTTAFQPAKNVLEEVQAFLE----ANPAEI--VTLFIE 107 (299)
Q Consensus 38 ~~si~~QL~~GVR~ldlrv~~~-~~~-l~~~H~~~~~C~~~~~~~~~l~~~L~eI~~fL~----~nP~Ev--ViL~l~ 107 (299)
-..|.+-++.|+..+|+||+.. +|. ++++|+....|.........+.++|++|++=.. ..++++ |+|+++
T Consensus 39 l~~~~~a~~~GAn~IE~DV~~~~dg~~v~~hhg~pcdc~r~C~~~~~~~~~l~~lr~~ttpg~~k~~~~l~lv~~DlK 116 (302)
T 3rlg_A 39 IGQIDEFVNLGANSIETDVSFDDNANPEYTYHGIPCDCGRNCKKYENFNDFLKGLRSATTPGNSKYQEKLVLVVFDLK 116 (302)
T ss_dssp HHHHHHHHHTTCSEEEEEECBCTTSCBCBCCCCSSCCTTCCSCCCCBHHHHHHHHHHHHSTTSTTCCTTCCEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEEEEECCCCCEEEEECCCCcchhccCCCCccHHHHHHHHHHhcCCCCCccccceEEEEEEcC
Confidence 3468888889999999999874 444 566666422243211223578999999988775 344454 555666
No 10
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=70.21 E-value=6.4 Score=34.65 Aligned_cols=68 Identities=13% Similarity=0.067 Sum_probs=45.6
Q ss_pred cHHHHHhcCcceeecccceeCCceEEEecCCCCCCCCC--CccccHHHHHHHHHHHHh-cCC---C--CeEEEeecc
Q 036538 40 SITNQLHNGVRGLMLDMYDFQNDIWLCHSFDGRCYGST--TAFQPAKNVLEEVQAFLE-ANP---A--EIVTLFIED 108 (299)
Q Consensus 40 si~~QL~~GVR~ldlrv~~~~~~l~~~H~~~~~C~~~~--~~~~~l~~~L~eI~~fL~-~nP---~--EvViL~l~d 108 (299)
++..-++.|+.++|+||+..+|.+.+.|... .|.+.. ++.+.+.+.|.||++.-. .+| + +.+.|.++.
T Consensus 19 Af~~A~~~Gad~IE~DV~lkDG~lVv~HD~~-~~~l~Rtt~~~g~v~d~l~eL~~l~~~~~~~~~~~L~~l~iEiK~ 94 (285)
T 1xx1_A 19 QIPDFLDLGANALEADVTFKGSVPTYTYHGT-PCDFGRDCIRWEYFNVFLKTLREYTTPGNAKYRDGFILFVLDLKT 94 (285)
T ss_dssp HHHHHHHHTCSEEEEEEEEETTEEEEEECCS-SCCTTSCSCCEEEHHHHHHHHHHHTSTTCTTCCTTCCEEEEEECC
T ss_pred HHHHHHHhCCCEEEEEEEEECCEEEEEcCCc-ccccccccCCCccHHHHHHHHHHcccCCCCcccccccEEEEecCC
Confidence 6788889999999999988667889999751 122211 123568888999998642 111 2 256667764
No 11
>1rbl_M Ribulose 1,5 bisphosphate carboxylase/oxygenase ( chain); lyase(carbon-carbon), lyase; HET: CAP; 2.20A {Synechococcus elongatus} SCOP: d.73.1.1 PDB: 1rsc_M*
Probab=41.81 E-value=27 Score=26.73 Aligned_cols=28 Identities=18% Similarity=0.122 Sum_probs=23.6
Q ss_pred ccHHHHHHHHHHHHhcCCCCeEEEeecc
Q 036538 81 QPAKNVLEEVQAFLEANPAEIVTLFIED 108 (299)
Q Consensus 81 ~~l~~~L~eI~~fL~~nP~EvViL~l~d 108 (299)
....++|.||.+-+++||+|-|-|.==|
T Consensus 65 ~d~~~Vl~Ele~C~k~~p~~yVRligfD 92 (109)
T 1rbl_M 65 AAPQQVLDEVRECRSEYGDCYIRVAGFD 92 (109)
T ss_dssp CCHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 4678999999999999999988765433
No 12
>1svd_M Ribulose bisphosphate carboxylase small chain; beta-alpha-barrel, lyase; 1.80A {Halothiobacillus neapolitanus} SCOP: d.73.1.1
Probab=41.33 E-value=27 Score=26.76 Aligned_cols=28 Identities=39% Similarity=0.455 Sum_probs=23.5
Q ss_pred ccHHHHHHHHHHHHhcCCCCeEEEeecc
Q 036538 81 QPAKNVLEEVQAFLEANPAEIVTLFIED 108 (299)
Q Consensus 81 ~~l~~~L~eI~~fL~~nP~EvViL~l~d 108 (299)
....++|.||.+-+++||+|-|-|.==|
T Consensus 67 ~d~~~Vl~El~~C~k~~p~~yVRligfD 94 (110)
T 1svd_M 67 QNVDNVLAEIEACRSAYPTHQVKLVAYD 94 (110)
T ss_dssp CCHHHHHHHHHHHHHHSTTSEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 4578999999999999999988765433
No 13
>3zxw_B Ribulose bisphosphate carboxylase small chain; CO2/O2 specificity, carbon dioxide fixation, photosynthesis, thermostability; HET: KCX CAP; 2.10A {Thermosynechococcus elongatus} PDB: 2ybv_B*
Probab=38.46 E-value=33 Score=26.68 Aligned_cols=28 Identities=29% Similarity=0.345 Sum_probs=23.8
Q ss_pred ccHHHHHHHHHHHHhcCCCCeEEEeecc
Q 036538 81 QPAKNVLEEVQAFLEANPAEIVTLFIED 108 (299)
Q Consensus 81 ~~l~~~L~eI~~fL~~nP~EvViL~l~d 108 (299)
....++|.||.+-+++||+|-|-|.==|
T Consensus 64 ~d~~~Vl~Ele~C~k~~p~~yVRliGfD 91 (118)
T 3zxw_B 64 TNAQDVLNEVQQCRSEYPNCFIRVVAFD 91 (118)
T ss_dssp CCHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCceEEEEEEe
Confidence 5678999999999999999998866443
No 14
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=36.80 E-value=14 Score=31.83 Aligned_cols=36 Identities=22% Similarity=0.331 Sum_probs=29.4
Q ss_pred CCCccccHHHHHhcCcceeecccce-eCCceEEEecC
Q 036538 34 PENQQDSITNQLHNGVRGLMLDMYD-FQNDIWLCHSF 69 (299)
Q Consensus 34 ~~nQ~~si~~QL~~GVR~ldlrv~~-~~~~l~~~H~~ 69 (299)
..|=-.++..-++.|+.++|+||+. .+|.+.++|..
T Consensus 25 PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~ 61 (252)
T 2pz0_A 25 PENTIAAFKRAMELGADGIELDVQLTKDGHLVVIHDE 61 (252)
T ss_dssp CTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSS
T ss_pred CcchHHHHHHHHHcCCCEEEEEEEEecCCeEEEEcCC
Confidence 3454567888999999999999997 57889999964
No 15
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=36.43 E-value=17 Score=30.74 Aligned_cols=35 Identities=26% Similarity=0.349 Sum_probs=28.8
Q ss_pred CCccccHHHHHhcCcceeeccccee-CCceEEEecC
Q 036538 35 ENQQDSITNQLHNGVRGLMLDMYDF-QNDIWLCHSF 69 (299)
Q Consensus 35 ~nQ~~si~~QL~~GVR~ldlrv~~~-~~~l~~~H~~ 69 (299)
.|=-.++..-++.|+.++++||+.. +|.+.++|..
T Consensus 22 ENTl~Af~~A~~~G~d~iE~DV~lT~Dg~lVv~HD~ 57 (224)
T 1vd6_A 22 ENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDP 57 (224)
T ss_dssp TTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSCS
T ss_pred cchHHHHHHHHHcCCCEEEEEeeEecCCcEEEECCC
Confidence 3444578889999999999999974 6789999974
No 16
>1bwv_S Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: d.73.1.1 PDB: 1iwa_B
Probab=36.40 E-value=36 Score=27.19 Aligned_cols=28 Identities=18% Similarity=0.071 Sum_probs=23.7
Q ss_pred ccHHHHHHHHHHHHhcCCCCeEEEeecc
Q 036538 81 QPAKNVLEEVQAFLEANPAEIVTLFIED 108 (299)
Q Consensus 81 ~~l~~~L~eI~~fL~~nP~EvViL~l~d 108 (299)
....++|.||.+-+++||++-|-|.==|
T Consensus 59 td~~~Vl~Ele~C~k~~p~~YVRliGfD 86 (138)
T 1bwv_S 59 TDPAAVLFEINACRKARSNFYIKVVGFS 86 (138)
T ss_dssp CCHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 4678999999999999999988765443
No 17
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=36.06 E-value=18 Score=31.08 Aligned_cols=35 Identities=23% Similarity=0.223 Sum_probs=28.6
Q ss_pred CCccccHHHHHhcCcceeeccccee-CCceEEEecC
Q 036538 35 ENQQDSITNQLHNGVRGLMLDMYDF-QNDIWLCHSF 69 (299)
Q Consensus 35 ~nQ~~si~~QL~~GVR~ldlrv~~~-~~~l~~~H~~ 69 (299)
.|=-.++..-++.|+.++++||+.. +|.+.++|..
T Consensus 21 ENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~ 56 (247)
T 2otd_A 21 ENTLAAIDVGAKYGHKMIEFDAKLSKDGEIFLLHDD 56 (247)
T ss_dssp SSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSS
T ss_pred chhHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCC
Confidence 3444578889999999999999974 7789999964
No 18
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=35.84 E-value=17 Score=31.35 Aligned_cols=34 Identities=12% Similarity=0.121 Sum_probs=28.1
Q ss_pred CccccHHHHHhcCcceeecccce-eCCceEEEecC
Q 036538 36 NQQDSITNQLHNGVRGLMLDMYD-FQNDIWLCHSF 69 (299)
Q Consensus 36 nQ~~si~~QL~~GVR~ldlrv~~-~~~~l~~~H~~ 69 (299)
|=-.++..-++.|++++++||+. .+|.+.++|..
T Consensus 18 NTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~ 52 (250)
T 3ks6_A 18 STPHGFTATAAMALEEVEFDLHPTADGAIVVHHDP 52 (250)
T ss_dssp TCHHHHHHHHTSSSSEEEEEEEECTTSCEEECSSS
T ss_pred chHHHHHHHHHcCCCEEEEEEeEccCCCEEEECCC
Confidence 33457888999999999999997 57789999964
No 19
>1bxn_I Rubisco, protein (ribulose bisphosphate carboxylase small; lyase (carbon-carbon), lyase; 2.70A {Cupriavidus necator} SCOP: d.73.1.1
Probab=35.68 E-value=36 Score=27.20 Aligned_cols=28 Identities=18% Similarity=0.226 Sum_probs=23.8
Q ss_pred ccHHHHHHHHHHHHhcCCCCeEEEeecc
Q 036538 81 QPAKNVLEEVQAFLEANPAEIVTLFIED 108 (299)
Q Consensus 81 ~~l~~~L~eI~~fL~~nP~EvViL~l~d 108 (299)
....++|.||.+-+++||++-|-|.==|
T Consensus 59 td~~~Vl~Ele~C~k~~p~~YVRliGfD 86 (139)
T 1bxn_I 59 RDAAGILMEINNARNTFPNHYIRVTAFD 86 (139)
T ss_dssp CCHHHHHHHHHHHHHHCSSSEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 4678999999999999999988765444
No 20
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=35.11 E-value=19 Score=31.06 Aligned_cols=35 Identities=20% Similarity=0.270 Sum_probs=28.6
Q ss_pred CCccccHHHHHhcCcceeecccce-eCCceEEEecC
Q 036538 35 ENQQDSITNQLHNGVRGLMLDMYD-FQNDIWLCHSF 69 (299)
Q Consensus 35 ~nQ~~si~~QL~~GVR~ldlrv~~-~~~~l~~~H~~ 69 (299)
.|=-.++..-++.|+.++|+||+. .+|.+.++|..
T Consensus 16 ENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~ 51 (248)
T 1zcc_A 16 ENTFAAADLALQQGADYIELDVRESADGVLYVIHDE 51 (248)
T ss_dssp SSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSS
T ss_pred chHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEECCC
Confidence 343457888999999999999997 47789999974
No 21
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=34.66 E-value=19 Score=31.08 Aligned_cols=35 Identities=17% Similarity=0.085 Sum_probs=28.5
Q ss_pred CCccccHHHHHhcCcceeecccce-eCCceEEEecC
Q 036538 35 ENQQDSITNQLHNGVRGLMLDMYD-FQNDIWLCHSF 69 (299)
Q Consensus 35 ~nQ~~si~~QL~~GVR~ldlrv~~-~~~~l~~~H~~ 69 (299)
.|=-.++..-++.|+.++++||+. .+|.+.++|..
T Consensus 24 ENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~ 59 (252)
T 3qvq_A 24 ENTLASLHLAGQQGIKWVEIDVMLSGDGIPVIFHDD 59 (252)
T ss_dssp TTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECCCS
T ss_pred ccHHHHHHHHHHcCCCEEEEEEEECCCCcEEEECCC
Confidence 344457888999999999999997 57789999964
No 22
>3m91_B Prokaryotic ubiquitin-like protein PUP; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis}
Probab=34.48 E-value=26 Score=22.27 Aligned_cols=26 Identities=23% Similarity=0.590 Sum_probs=15.9
Q ss_pred cHHHHHHHHHHHHhcCCCCeEEEeec
Q 036538 82 PAKNVLEEVQAFLEANPAEIVTLFIE 107 (299)
Q Consensus 82 ~l~~~L~eI~~fL~~nP~EvViL~l~ 107 (299)
.+.++|.+|-.-|+.|..|+|-=+++
T Consensus 15 ~~D~lLDeId~vLE~NAeeFV~~fVQ 40 (44)
T 3m91_B 15 ETDDLLDEIDDVLEENAEDFVRAYVQ 40 (44)
T ss_dssp HHHHHHHHHHHHHHHTC---------
T ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 47899999999999999998865544
No 23
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=34.33 E-value=19 Score=31.02 Aligned_cols=32 Identities=16% Similarity=0.095 Sum_probs=27.3
Q ss_pred cccHHHHHhcCcceeecccce-eCCceEEEecC
Q 036538 38 QDSITNQLHNGVRGLMLDMYD-FQNDIWLCHSF 69 (299)
Q Consensus 38 ~~si~~QL~~GVR~ldlrv~~-~~~~l~~~H~~ 69 (299)
-.++..-++.|+.++++||+. .+|.+.++|..
T Consensus 26 l~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~ 58 (258)
T 2o55_A 26 LRSFVLCMERNIPYIETDLRVCKTGEIVLFHGT 58 (258)
T ss_dssp HHHHHHHHHTTCCEEEEEEEECTTSCEEECCCS
T ss_pred HHHHHHHHHcCcCEEEEEEEEecCCeEEEEeCC
Confidence 357888999999999999997 56789999975
No 24
>4f0h_B Ribulose bisphosphate carboxylase small chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_B 4f0m_B 1iwa_B 1bwv_S*
Probab=34.12 E-value=41 Score=26.85 Aligned_cols=28 Identities=18% Similarity=0.070 Sum_probs=23.8
Q ss_pred ccHHHHHHHHHHHHhcCCCCeEEEeecc
Q 036538 81 QPAKNVLEEVQAFLEANPAEIVTLFIED 108 (299)
Q Consensus 81 ~~l~~~L~eI~~fL~~nP~EvViL~l~d 108 (299)
.....+|.||.+-+++||++-|-|.==|
T Consensus 59 ~d~~~Vl~Ele~C~k~~p~~YVRliGfD 86 (138)
T 4f0h_B 59 TDPAPVLFEINACRKAKSNFYIKVVGFS 86 (138)
T ss_dssp CSHHHHHHHHHHHHHHTTTSEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 5678999999999999999988765533
No 25
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=33.85 E-value=20 Score=30.76 Aligned_cols=68 Identities=16% Similarity=0.126 Sum_probs=44.0
Q ss_pred CccccHHHHHhcCcceeecccce-eCCceEEEecCC--C--------------CCCCCCCccccHHHHHHHHHHHHhcCC
Q 036538 36 NQQDSITNQLHNGVRGLMLDMYD-FQNDIWLCHSFD--G--------------RCYGSTTAFQPAKNVLEEVQAFLEANP 98 (299)
Q Consensus 36 nQ~~si~~QL~~GVR~ldlrv~~-~~~~l~~~H~~~--~--------------~C~~~~~~~~~l~~~L~eI~~fL~~nP 98 (299)
|=-.++..-++.|+.++++||+. .+|.+.++|... + .+..+. ...+ |+|+-+++..+|
T Consensus 22 NTl~Af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~~~~v~~~t~~el~~l~~~~~~-~ipt----L~evl~~~~~~~ 96 (238)
T 3no3_A 22 NSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQGKHIQSCTYDELKDLQLSNGE-KLPT----LEQYLKRAKKLK 96 (238)
T ss_dssp TSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEETTEEGGGSCHHHHTTCBCTTSC-BCCB----HHHHHHHHHHCT
T ss_pred cHHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCCCCCCChHhCCHHHHhhCCCCCCC-cCCc----HHHHHHHHhhcC
Confidence 33457888999999999999997 567888899640 0 000000 0123 445555666677
Q ss_pred CCeEEEeecc
Q 036538 99 AEIVTLFIED 108 (299)
Q Consensus 99 ~EvViL~l~d 108 (299)
+-.+.|.++.
T Consensus 97 ~~~l~iEiK~ 106 (238)
T 3no3_A 97 NIRLIFELKS 106 (238)
T ss_dssp TCEEEEEECC
T ss_pred CceEEEEeCC
Confidence 7677788884
No 26
>2dt7_A Splicing factor 3A subunit 3; structure genomics, SF3A120, SF3A60, SURP domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.56 E-value=23 Score=21.79 Aligned_cols=21 Identities=29% Similarity=0.468 Sum_probs=18.6
Q ss_pred ccHHHHHHHHHHHHhcCCCCe
Q 036538 81 QPAKNVLEEVQAFLEANPAEI 101 (299)
Q Consensus 81 ~~l~~~L~eI~~fL~~nP~Ev 101 (299)
..+-+-|++|++|=+.+|+|+
T Consensus 13 ~~FY~rlk~Ike~Hrr~P~~~ 33 (38)
T 2dt7_A 13 AEFYNRLKQIKEFHRKHPNEI 33 (38)
T ss_dssp HHHHHHHHHHHHHHHSCCSSC
T ss_pred HHHHHHHHHHHHHHHhCCCcc
Confidence 457788999999999999997
No 27
>1gk8_I Ribulose bisphosphate carboxylase small chain 1; lyase, rubisco, photosynthesis; HET: KCX CAP; 1.4A {Chlamydomonas reinhardtii} SCOP: d.73.1.1 PDB: 2v63_I* 2v67_I* 2v68_I* 2v69_I* 2v6a_I* 2vdh_I* 2vdi_I* 1uw9_C* 1uwa_C* 1ir2_I* 1uzd_C* 1uzh_C*
Probab=32.86 E-value=44 Score=26.73 Aligned_cols=28 Identities=32% Similarity=0.336 Sum_probs=23.4
Q ss_pred ccHHHHHHHHHHHHhcCCCCeEEEeecc
Q 036538 81 QPAKNVLEEVQAFLEANPAEIVTLFIED 108 (299)
Q Consensus 81 ~~l~~~L~eI~~fL~~nP~EvViL~l~d 108 (299)
....++|.||.+-+++||++.|-|.==|
T Consensus 84 td~~qVl~El~~C~k~~P~~YVRligfD 111 (140)
T 1gk8_I 84 RDPMQVLREIVACTKAFPDAYVRLVAFD 111 (140)
T ss_dssp CCHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 4578999999999999999988765433
No 28
>1wdd_S Ribulose bisphosphate carboxylase small chain C; rubisco, photosynthesis, alpha/beta barrel, N-methylmethioni translational modification, lyase; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: d.73.1.1 PDB: 3axm_S* 3axk_S* 8ruc_I* 1aus_S 1rbo_S* 1rco_S* 1rcx_S* 1rxo_S* 1upm_C* 1upp_I* 1aa1_S* 3rub_S 1rlc_S* 1rld_S 1ej7_S 1ir1_S* 4rub_S*
Probab=32.01 E-value=47 Score=26.15 Aligned_cols=26 Identities=27% Similarity=0.345 Sum_probs=22.6
Q ss_pred ccHHHHHHHHHHHHhcCCCCeEEEee
Q 036538 81 QPAKNVLEEVQAFLEANPAEIVTLFI 106 (299)
Q Consensus 81 ~~l~~~L~eI~~fL~~nP~EvViL~l 106 (299)
....++|.||.+-+++||++-|-|.=
T Consensus 77 td~~~Vl~El~~C~k~~P~~YVRlig 102 (128)
T 1wdd_S 77 TDATQVLKELEEAKKAYPDAFVRIIG 102 (128)
T ss_dssp CCHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCeEEEEE
Confidence 45789999999999999999887654
No 29
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=30.03 E-value=33 Score=29.18 Aligned_cols=36 Identities=19% Similarity=0.303 Sum_probs=29.4
Q ss_pred CCCccccHHHHHhcCcceeecccce-eCCceEEEecC
Q 036538 34 PENQQDSITNQLHNGVRGLMLDMYD-FQNDIWLCHSF 69 (299)
Q Consensus 34 ~~nQ~~si~~QL~~GVR~ldlrv~~-~~~~l~~~H~~ 69 (299)
..|=-.++..-++.|+.++|+||+. .+|.+.++|..
T Consensus 26 PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~ 62 (234)
T 1o1z_A 26 LENTLEAFMKAIEAGANGVELDVRLSKDGKVVVSHDE 62 (234)
T ss_dssp CTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSS
T ss_pred CCchHHHHHHHHHcCCCEEEEEeeEecCCCEEEEcCC
Confidence 3444568889999999999999997 56789999964
No 30
>2k7r_A Primosomal protein DNAI; DNAI N-terminal domain, helicase-loading protein, ATP- binding, DNA replication, nucleotide-binding, primosome; NMR {Bacillus subtilis}
Probab=29.81 E-value=19 Score=27.12 Aligned_cols=13 Identities=54% Similarity=0.739 Sum_probs=11.2
Q ss_pred HHHHHHhcCCCCe
Q 036538 89 EVQAFLEANPAEI 101 (299)
Q Consensus 89 eI~~fL~~nP~Ev 101 (299)
+|++||.+||+|+
T Consensus 33 ~V~~Fl~~h~~~l 45 (106)
T 2k7r_A 33 DVQAFLKENEEVI 45 (106)
T ss_dssp HHHHHHHHSTTTC
T ss_pred HHHHHHHHChhhC
Confidence 6899999999875
No 31
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=26.65 E-value=30 Score=30.81 Aligned_cols=35 Identities=26% Similarity=0.294 Sum_probs=28.4
Q ss_pred CCccccHHHHHhcCcceeecccce-eCCceEEEecC
Q 036538 35 ENQQDSITNQLHNGVRGLMLDMYD-FQNDIWLCHSF 69 (299)
Q Consensus 35 ~nQ~~si~~QL~~GVR~ldlrv~~-~~~~l~~~H~~ 69 (299)
.|=-.++..-++.|+.++|+||+. .+|.+.++|..
T Consensus 32 ENTl~Af~~A~~~G~d~iE~DV~lTkDg~~Vv~HD~ 67 (313)
T 3l12_A 32 ENTLEGFAFTLAAGVRALEFDVVMTADGVPVVTHNH 67 (313)
T ss_dssp TTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECSSS
T ss_pred ccHHHHHHHHHHcCCCEEEEEEEECCCCCEEEECCc
Confidence 344457888999999999999997 56788888964
No 32
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=26.27 E-value=39 Score=29.23 Aligned_cols=35 Identities=29% Similarity=0.312 Sum_probs=28.4
Q ss_pred CCccccHHHHHhcCcceeecccce-eCCceEEEecC
Q 036538 35 ENQQDSITNQLHNGVRGLMLDMYD-FQNDIWLCHSF 69 (299)
Q Consensus 35 ~nQ~~si~~QL~~GVR~ldlrv~~-~~~~l~~~H~~ 69 (299)
.|=-.++..-++.|+.++|+||+. .+|.+.++|..
T Consensus 23 ENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~ 58 (272)
T 3ch0_A 23 ENTIAAFTKALLLGVTTLEFDLVISKDNRVVVSHDT 58 (272)
T ss_dssp TTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSS
T ss_pred cccHHHHHHHHHcCCCEEEEeeeEcCCCcEEEeCCC
Confidence 444457888999999999999997 46788889974
No 33
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=24.86 E-value=33 Score=30.51 Aligned_cols=35 Identities=23% Similarity=0.143 Sum_probs=28.3
Q ss_pred CCccccHHHHHhcCcceeecccce-eCCceEEEecC
Q 036538 35 ENQQDSITNQLHNGVRGLMLDMYD-FQNDIWLCHSF 69 (299)
Q Consensus 35 ~nQ~~si~~QL~~GVR~ldlrv~~-~~~~l~~~H~~ 69 (299)
.|=-.++..-++.|+.++++||+. .+|.+.++|..
T Consensus 47 ENTl~af~~A~~~g~d~iE~Dv~~TkDg~~Vv~HD~ 82 (292)
T 3mz2_A 47 ENSMETFENTLSYTPATFEIDPRLTKDSVIVLFHDD 82 (292)
T ss_dssp TTCHHHHHHHHHHCCCEEEECEEECTTCCEEECCSS
T ss_pred ccHHHHHHHHHHcCCCEEEEEEeECCCCcEEEECCc
Confidence 343457788899999999999998 56789999964
No 34
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=24.04 E-value=37 Score=29.80 Aligned_cols=32 Identities=6% Similarity=-0.016 Sum_probs=25.8
Q ss_pred cccHHHH-HhcCcceeeccccee-CCceEEEecC
Q 036538 38 QDSITNQ-LHNGVRGLMLDMYDF-QNDIWLCHSF 69 (299)
Q Consensus 38 ~~si~~Q-L~~GVR~ldlrv~~~-~~~l~~~H~~ 69 (299)
-.++..- ++.|+.++++||+.. +|.+.++|..
T Consensus 41 l~Af~~A~~~~Gad~iE~DV~lTkDG~lVv~HD~ 74 (287)
T 2oog_A 41 FQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDE 74 (287)
T ss_dssp HHHHHHHHHTSCCSEEEEEEEECTTCCEEECSSS
T ss_pred HHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCC
Confidence 3467676 689999999999974 6789999964
No 35
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=23.51 E-value=37 Score=30.86 Aligned_cols=35 Identities=14% Similarity=0.142 Sum_probs=28.1
Q ss_pred CCccccHHHHHhcCcceeecccce-eCCceEEEecC
Q 036538 35 ENQQDSITNQLHNGVRGLMLDMYD-FQNDIWLCHSF 69 (299)
Q Consensus 35 ~nQ~~si~~QL~~GVR~ldlrv~~-~~~~l~~~H~~ 69 (299)
.|=-.++..-++.|+.++|+||+. .+|.+.+.|..
T Consensus 45 ENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~ 80 (356)
T 1ydy_A 45 EHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDH 80 (356)
T ss_dssp TTCHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSS
T ss_pred cchHHHHHHHHHcCCCEEEeeeEECCCCcEEEeCCC
Confidence 444457888999999999999997 46788888864
Done!