Query 036539
Match_columns 749
No_of_seqs 396 out of 3631
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 03:03:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036539.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036539hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00142 sucrose synthase 100.0 8E-186 2E-190 1605.2 66.3 748 1-749 43-790 (815)
2 TIGR02470 sucr_synth sucrose s 100.0 2E-184 5E-189 1593.3 70.3 748 1-749 19-767 (784)
3 PF00862 Sucrose_synth: Sucros 100.0 3E-162 6E-167 1308.6 29.6 515 1-516 36-550 (550)
4 TIGR02468 sucrsPsyn_pln sucros 100.0 1.9E-58 4E-63 547.3 40.4 456 237-730 168-671 (1050)
5 KOG0853 Glycosyltransferase [C 100.0 9.5E-59 2.1E-63 510.9 24.3 486 155-749 1-487 (495)
6 TIGR02472 sucr_P_syn_N sucrose 100.0 2.8E-51 6.1E-56 463.3 40.5 426 239-727 1-438 (439)
7 PRK00654 glgA glycogen synthas 100.0 4.6E-44 9.9E-49 407.5 37.9 427 239-729 1-462 (466)
8 TIGR03449 mycothiol_MshA UDP-N 100.0 3E-43 6.5E-48 392.3 39.9 399 241-729 1-401 (405)
9 PLN02939 transferase, transfer 100.0 1.9E-42 4.1E-47 405.5 42.5 460 216-730 455-967 (977)
10 TIGR02095 glgA glycogen/starch 100.0 1.9E-42 4E-47 395.0 38.9 430 239-729 1-472 (473)
11 cd03800 GT1_Sucrose_synthase T 100.0 2.1E-41 4.6E-46 373.7 40.8 397 240-724 1-397 (398)
12 PLN02316 synthase/transferase 100.0 1.4E-41 3E-46 405.0 40.9 407 237-729 586-1033(1036)
13 PRK14098 glycogen synthase; Pr 100.0 1.5E-41 3.2E-46 388.0 38.6 440 236-729 4-485 (489)
14 PRK10307 putative glycosyl tra 100.0 3.4E-41 7.3E-46 377.5 38.1 396 239-729 1-407 (412)
15 cd03796 GT1_PIG-A_like This fa 100.0 9.5E-41 2.1E-45 372.5 37.5 366 240-730 1-368 (398)
16 cd03791 GT1_Glycogen_synthase_ 100.0 1.6E-40 3.4E-45 379.0 37.5 432 240-728 1-475 (476)
17 PRK14099 glycogen synthase; Pr 100.0 4E-40 8.7E-45 375.8 39.2 437 238-730 3-479 (485)
18 PRK15427 colanic acid biosynth 100.0 1.9E-39 4E-44 363.3 38.8 281 365-729 116-405 (406)
19 cd04962 GT1_like_5 This family 100.0 8.1E-39 1.7E-43 350.5 39.6 366 239-729 1-370 (371)
20 PLN02871 UDP-sulfoquinovose:DA 100.0 3E-39 6.5E-44 367.9 37.1 375 236-730 56-435 (465)
21 TIGR02149 glgA_Coryne glycogen 100.0 5.9E-39 1.3E-43 354.7 38.3 379 239-729 1-386 (388)
22 PRK15484 lipopolysaccharide 1, 100.0 5.9E-38 1.3E-42 348.3 38.2 375 237-730 1-378 (380)
23 cd03818 GT1_ExpC_like This fam 100.0 3.6E-37 7.7E-42 343.4 38.5 366 278-725 15-396 (396)
24 TIGR03088 stp2 sugar transfera 100.0 2.9E-37 6.2E-42 340.4 36.2 365 240-729 3-372 (374)
25 KOG1111 N-acetylglucosaminyltr 100.0 2.5E-38 5.5E-43 329.3 24.4 363 239-728 1-365 (426)
26 cd03805 GT1_ALG2_like This fam 100.0 3.2E-37 7E-42 341.3 34.1 386 239-723 1-392 (392)
27 cd05844 GT1_like_7 Glycosyltra 100.0 8.1E-37 1.8E-41 334.2 34.0 280 366-725 81-366 (367)
28 cd04955 GT1_like_6 This family 100.0 5E-36 1.1E-40 326.4 38.0 361 240-728 1-363 (363)
29 PRK15179 Vi polysaccharide bio 100.0 1.7E-36 3.6E-41 355.0 36.0 291 366-728 399-692 (694)
30 PRK15490 Vi polysaccharide bio 100.0 3E-36 6.6E-41 338.8 34.7 392 259-729 171-575 (578)
31 cd03792 GT1_Trehalose_phosphor 100.0 9.8E-36 2.1E-40 328.8 35.5 287 365-729 83-371 (372)
32 cd03819 GT1_WavL_like This fam 100.0 1.4E-35 3.1E-40 322.2 33.1 347 260-719 8-355 (355)
33 cd03821 GT1_Bme6_like This fam 100.0 5.3E-35 1.2E-39 315.3 36.3 372 240-724 1-374 (375)
34 cd03799 GT1_amsK_like This is 100.0 2.5E-34 5.5E-39 311.7 36.3 272 365-723 77-355 (355)
35 cd03802 GT1_AviGT4_like This f 100.0 2.5E-34 5.3E-39 310.0 35.5 333 239-728 1-335 (335)
36 cd03795 GT1_like_4 This family 100.0 3.2E-34 7E-39 311.1 36.3 354 240-720 1-357 (357)
37 cd03794 GT1_wbuB_like This fam 100.0 6.2E-34 1.3E-38 308.1 37.0 387 240-724 1-394 (394)
38 cd03814 GT1_like_2 This family 100.0 6.7E-34 1.5E-38 307.3 36.4 363 240-728 1-364 (364)
39 cd03813 GT1_like_3 This family 100.0 4E-35 8.8E-40 334.9 27.8 295 365-728 171-475 (475)
40 cd04951 GT1_WbdM_like This fam 100.0 1.1E-33 2.3E-38 307.3 36.3 281 366-728 78-359 (360)
41 cd03801 GT1_YqgM_like This fam 100.0 1.5E-33 3.2E-38 301.2 36.8 374 240-728 1-374 (374)
42 cd03807 GT1_WbnK_like This fam 100.0 9.9E-34 2.1E-38 304.2 35.1 363 240-728 1-365 (365)
43 cd03822 GT1_ecORF704_like This 100.0 2.1E-33 4.5E-38 304.2 37.7 358 240-728 1-366 (366)
44 PRK09922 UDP-D-galactose:(gluc 100.0 3.3E-34 7.2E-39 315.5 30.2 268 365-728 82-354 (359)
45 cd03817 GT1_UGDG_like This fam 100.0 2.2E-33 4.8E-38 303.1 35.6 370 240-728 1-372 (374)
46 cd03812 GT1_CapH_like This fam 100.0 6.4E-34 1.4E-38 309.6 30.9 346 240-711 1-347 (358)
47 PLN02846 digalactosyldiacylgly 100.0 1.9E-33 4.2E-38 315.0 34.9 372 237-730 3-392 (462)
48 cd03816 GT1_ALG1_like This fam 100.0 3.9E-33 8.5E-38 313.3 36.3 391 236-724 1-411 (415)
49 cd03825 GT1_wcfI_like This fam 100.0 3.5E-33 7.6E-38 303.9 33.6 343 239-729 1-364 (365)
50 cd03808 GT1_cap1E_like This fa 100.0 2.2E-32 4.7E-37 292.6 35.8 356 240-724 1-358 (359)
51 cd03809 GT1_mtfB_like This fam 100.0 6.3E-33 1.4E-37 300.3 30.5 364 240-724 1-364 (365)
52 cd03823 GT1_ExpE7_like This fa 100.0 2.7E-32 5.9E-37 293.8 35.2 356 240-728 1-358 (359)
53 cd03820 GT1_amsD_like This fam 100.0 2.7E-32 5.9E-37 290.6 34.6 345 240-724 1-347 (348)
54 PLN02949 transferase, transfer 100.0 2.9E-32 6.4E-37 308.8 36.3 395 233-729 28-456 (463)
55 PRK10125 putative glycosyl tra 100.0 5.9E-33 1.3E-37 310.5 29.8 278 365-729 92-404 (405)
56 cd03806 GT1_ALG11_like This fa 100.0 2.6E-32 5.7E-37 306.9 34.6 374 241-721 3-418 (419)
57 cd03798 GT1_wlbH_like This fam 100.0 1.2E-31 2.6E-36 287.9 37.8 284 365-728 91-375 (377)
58 TIGR03087 stp1 sugar transfera 100.0 8.3E-33 1.8E-37 308.5 27.8 284 365-728 102-395 (397)
59 cd03811 GT1_WabH_like This fam 100.0 1.3E-31 2.7E-36 285.5 33.8 351 240-715 1-352 (353)
60 TIGR02918 accessory Sec system 100.0 1.1E-31 2.4E-36 306.8 30.0 279 365-728 209-498 (500)
61 cd04946 GT1_AmsK_like This fam 100.0 3.4E-31 7.5E-36 296.8 30.1 276 365-724 125-406 (407)
62 COG0297 GlgA Glycogen synthase 100.0 3.5E-30 7.7E-35 288.9 32.6 438 239-730 1-478 (487)
63 PLN02275 transferase, transfer 100.0 2.8E-29 6E-34 278.0 31.1 249 365-687 98-369 (371)
64 PLN02501 digalactosyldiacylgly 100.0 2.8E-29 6.1E-34 284.9 29.1 273 366-730 433-710 (794)
65 cd03804 GT1_wbaZ_like This fam 100.0 9.7E-30 2.1E-34 278.1 24.5 264 365-723 81-350 (351)
66 cd04949 GT1_gtfA_like This fam 100.0 3.1E-29 6.8E-34 276.0 28.5 273 366-723 98-372 (372)
67 PHA01630 putative group 1 glyc 100.0 1.1E-28 2.4E-33 268.7 27.6 258 373-730 52-331 (331)
68 cd03793 GT1_Glycogen_synthase_ 100.0 2.3E-27 5E-32 267.3 31.6 333 365-729 146-586 (590)
69 PRK00726 murG undecaprenyldiph 99.9 6.8E-26 1.5E-30 248.9 30.1 344 239-728 2-356 (357)
70 cd03788 GT1_TPS Trehalose-6-Ph 99.9 4.9E-26 1.1E-30 258.7 23.9 321 355-725 120-457 (460)
71 PHA01633 putative glycosyl tra 99.9 2.6E-25 5.7E-30 240.7 26.2 224 431-724 89-334 (335)
72 cd03785 GT1_MurG MurG is an N- 99.9 1.6E-24 3.4E-29 236.7 29.9 324 260-721 8-349 (350)
73 TIGR01133 murG undecaprenyldip 99.9 3.5E-24 7.6E-29 233.8 28.7 326 262-721 8-346 (348)
74 TIGR02400 trehalose_OtsA alpha 99.9 2.5E-24 5.4E-29 243.6 27.4 321 355-726 116-453 (456)
75 PRK05749 3-deoxy-D-manno-octul 99.9 2.2E-23 4.7E-28 234.9 29.1 285 367-729 124-419 (425)
76 PRK13609 diacylglycerol glucos 99.9 4.5E-23 9.8E-28 228.7 24.9 262 366-728 103-370 (380)
77 PF00534 Glycos_transf_1: Glyc 99.9 1.3E-23 2.8E-28 206.2 15.4 160 529-709 12-172 (172)
78 PLN03063 alpha,alpha-trehalose 99.9 3E-22 6.5E-27 239.8 25.8 321 355-729 136-477 (797)
79 cd04950 GT1_like_1 Glycosyltra 99.9 7.8E-21 1.7E-25 210.7 32.3 267 364-728 99-370 (373)
80 PRK14501 putative bifunctional 99.9 2.7E-21 5.8E-26 231.4 23.3 323 355-730 122-463 (726)
81 PLN02605 monogalactosyldiacylg 99.9 2.3E-20 5E-25 207.6 27.6 264 366-728 99-380 (382)
82 cd01635 Glycosyltransferase_GT 99.9 2.8E-20 6.1E-25 187.5 25.0 120 537-673 109-229 (229)
83 TIGR02094 more_P_ylases alpha- 99.9 6.9E-20 1.5E-24 212.5 29.6 343 361-727 155-598 (601)
84 COG0438 RfaG Glycosyltransfera 99.8 5.8E-19 1.3E-23 185.8 27.7 291 368-730 84-377 (381)
85 PRK13608 diacylglycerol glucos 99.8 2.6E-19 5.7E-24 199.8 26.4 262 366-728 103-370 (391)
86 TIGR02398 gluc_glyc_Psyn gluco 99.8 9.2E-18 2E-22 189.8 28.0 324 356-726 122-479 (487)
87 TIGR00236 wecB UDP-N-acetylglu 99.8 4.6E-18 9.9E-23 187.8 22.4 275 366-725 85-363 (365)
88 PRK09814 beta-1,6-galactofuran 99.8 2.4E-17 5.2E-22 180.1 25.9 245 367-722 63-324 (333)
89 KOG1387 Glycosyltransferase [C 99.8 2.6E-16 5.6E-21 164.1 27.4 389 238-727 43-456 (465)
90 cd04299 GT1_Glycogen_Phosphory 99.8 2.6E-16 5.6E-21 185.9 28.9 341 362-726 243-686 (778)
91 PRK00025 lpxB lipid-A-disaccha 99.8 1.4E-16 3.1E-21 176.5 25.0 250 365-710 83-356 (380)
92 cd03786 GT1_UDP-GlcNAc_2-Epime 99.8 1.2E-16 2.5E-21 175.7 23.9 267 366-725 87-360 (363)
93 PLN03064 alpha,alpha-trehalose 99.7 4.7E-16 1E-20 186.1 25.0 320 355-727 220-559 (934)
94 TIGR03713 acc_sec_asp1 accesso 99.7 6.5E-15 1.4E-19 169.1 25.8 169 532-726 319-518 (519)
95 PF05693 Glycogen_syn: Glycoge 99.6 2.3E-14 5E-19 161.5 21.8 330 366-730 142-582 (633)
96 PF13692 Glyco_trans_1_4: Glyc 99.6 3.7E-15 8.1E-20 140.3 10.0 130 532-689 2-133 (135)
97 KOG2941 Beta-1,4-mannosyltrans 99.6 1.4E-12 3.1E-17 136.6 25.6 389 280-725 33-437 (444)
98 TIGR00215 lpxB lipid-A-disacch 99.5 3.1E-12 6.8E-17 142.7 25.0 249 366-708 88-364 (385)
99 PF13524 Glyco_trans_1_2: Glyc 99.4 2.4E-12 5.3E-17 113.7 10.4 92 628-725 1-92 (92)
100 PF00982 Glyco_transf_20: Glyc 99.3 1.8E-10 3.8E-15 131.0 23.3 321 356-727 131-472 (474)
101 PRK10117 trehalose-6-phosphate 99.3 6.2E-10 1.3E-14 125.4 24.8 324 355-728 112-452 (474)
102 PF13439 Glyco_transf_4: Glyco 99.2 4.3E-11 9.3E-16 116.1 11.4 169 259-494 9-177 (177)
103 PF13579 Glyco_trans_4_4: Glyc 99.2 2.4E-11 5.3E-16 115.8 8.5 160 262-487 1-160 (160)
104 COG0707 MurG UDP-N-acetylgluco 99.2 1.9E-08 4E-13 110.7 32.0 251 366-724 90-352 (357)
105 PRK12446 undecaprenyldiphospho 99.2 6E-09 1.3E-13 115.0 28.2 248 365-726 89-348 (352)
106 COG0380 OtsA Trehalose-6-phosp 99.2 4.4E-09 9.5E-14 118.1 24.1 329 355-727 136-477 (486)
107 PLN02205 alpha,alpha-trehalose 99.1 4.9E-09 1.1E-13 126.8 24.5 325 355-726 189-548 (854)
108 TIGR02919 accessory Sec system 99.1 1.2E-08 2.7E-13 115.0 23.9 141 533-708 283-424 (438)
109 cd03784 GT1_Gtf_like This fami 99.0 5.4E-08 1.2E-12 108.8 22.5 124 529-689 237-370 (401)
110 PF08323 Glyco_transf_5: Starc 99.0 2.1E-09 4.5E-14 112.7 10.1 183 240-448 1-229 (245)
111 TIGR01426 MGT glycosyltransfer 98.9 1.2E-06 2.7E-11 97.8 29.0 112 599-727 273-390 (392)
112 TIGR03492 conserved hypothetic 98.8 8E-07 1.7E-11 99.7 26.0 166 530-725 203-394 (396)
113 PF09314 DUF1972: Domain of un 98.8 7.1E-08 1.5E-12 96.1 14.3 177 238-489 1-185 (185)
114 TIGR03568 NeuC_NnaA UDP-N-acet 98.7 3E-06 6.4E-11 94.2 24.6 268 366-726 92-364 (365)
115 PF13528 Glyco_trans_1_3: Glyc 98.7 1.2E-06 2.7E-11 94.6 20.9 116 530-686 191-315 (318)
116 COG1519 KdtA 3-deoxy-D-manno-o 98.7 1.5E-05 3.2E-10 87.6 27.2 170 532-729 231-417 (419)
117 PF13477 Glyco_trans_4_2: Glyc 98.5 1.5E-06 3.3E-11 82.1 12.7 123 278-442 15-139 (139)
118 PF02350 Epimerase_2: UDP-N-ac 98.3 3.7E-05 8E-10 84.8 20.7 271 367-727 67-345 (346)
119 TIGR00661 MJ1255 conserved hyp 98.3 5.7E-05 1.2E-09 82.3 22.0 69 600-678 228-302 (321)
120 TIGR03590 PseG pseudaminic aci 98.3 6.9E-05 1.5E-09 80.2 21.4 97 532-657 171-268 (279)
121 PF13844 Glyco_transf_41: Glyc 98.3 1.7E-05 3.7E-10 89.5 16.9 184 519-729 274-466 (468)
122 KOG3742 Glycogen synthase [Car 98.3 3.6E-06 7.7E-11 91.4 10.0 104 620-725 496-608 (692)
123 PHA03392 egt ecdysteroid UDP-g 98.2 0.00048 1E-08 79.8 27.4 139 532-709 297-446 (507)
124 PF02684 LpxB: Lipid-A-disacch 98.0 0.00043 9.4E-09 76.8 21.0 241 365-701 80-346 (373)
125 COG1819 Glycosyl transferases, 98.0 0.00043 9.4E-09 78.0 21.0 158 530-728 236-400 (406)
126 COG0763 LpxB Lipid A disacchar 97.9 0.00063 1.4E-08 74.4 19.1 200 365-656 83-290 (381)
127 PF04007 DUF354: Protein of un 97.8 0.0025 5.4E-08 69.8 22.2 61 619-687 243-306 (335)
128 PLN02448 UDP-glycosyltransfera 97.7 0.028 6.2E-07 64.5 29.1 140 531-707 274-428 (459)
129 COG3914 Spy Predicted O-linked 97.6 0.0017 3.6E-08 73.8 16.5 181 521-728 421-612 (620)
130 COG4641 Uncharacterized protei 97.6 0.005 1.1E-07 67.1 18.9 117 601-728 237-360 (373)
131 PRK01021 lpxB lipid-A-disaccha 97.5 0.008 1.7E-07 70.0 20.7 197 365-655 308-513 (608)
132 COG0381 WecB UDP-N-acetylgluco 97.5 0.07 1.5E-06 58.8 26.6 277 365-730 90-371 (383)
133 cd04300 GT1_Glycogen_Phosphory 97.4 0.002 4.4E-08 77.0 15.1 150 523-682 521-688 (797)
134 COG0058 GlgP Glucan phosphoryl 97.4 0.0037 7.9E-08 74.0 15.9 143 524-675 479-630 (750)
135 PLN02208 glycosyltransferase f 97.3 0.54 1.2E-05 53.8 31.8 93 601-708 311-415 (442)
136 PRK14986 glycogen phosphorylas 97.2 0.0027 5.8E-08 76.0 12.0 151 523-683 534-702 (815)
137 PRK02797 4-alpha-L-fucosyltran 96.9 0.21 4.6E-06 53.6 22.4 168 533-729 146-316 (322)
138 PF12000 Glyco_trans_4_3: Gkyc 96.8 0.0076 1.6E-07 59.6 10.0 110 355-493 55-170 (171)
139 PLN02863 UDP-glucoronosyl/UDP- 96.8 1.6 3.4E-05 50.5 32.4 118 601-731 343-473 (477)
140 PRK10017 colanic acid biosynth 96.7 1.3 2.9E-05 50.3 28.2 133 548-701 260-398 (426)
141 PRK14985 maltodextrin phosphor 96.7 0.0049 1.1E-07 73.5 8.7 149 523-681 520-686 (798)
142 TIGR02093 P_ylase glycogen/sta 96.6 0.011 2.5E-07 70.5 11.1 150 523-682 518-685 (794)
143 PLN00414 glycosyltransferase f 96.6 2 4.4E-05 49.2 31.5 88 612-709 319-417 (446)
144 PLN02554 UDP-glycosyltransfera 96.6 2.2 4.8E-05 49.4 31.3 88 601-701 342-447 (481)
145 PLN02173 UDP-glucosyl transfer 96.6 2.1 4.5E-05 49.1 31.3 79 601-689 317-406 (449)
146 PRK14089 ipid-A-disaccharide s 96.5 0.043 9.3E-07 60.6 14.0 90 533-655 168-260 (347)
147 PF07429 Glyco_transf_56: 4-al 96.5 0.55 1.2E-05 51.2 21.7 121 532-666 184-306 (360)
148 COG4671 Predicted glycosyl tra 96.4 1.5 3.2E-05 47.9 24.4 132 530-688 218-362 (400)
149 PLN03007 UDP-glucosyltransfera 96.3 3.1 6.8E-05 48.2 33.7 78 600-689 344-438 (482)
150 PLN02410 UDP-glucoronosyl/UDP- 96.3 3 6.4E-05 47.9 29.9 79 601-689 324-408 (451)
151 PLN02210 UDP-glucosyl transfer 96.3 3.1 6.7E-05 47.9 33.2 165 531-725 269-451 (456)
152 PLN02562 UDP-glycosyltransfera 96.2 3.2 7E-05 47.6 31.5 88 600-701 327-419 (448)
153 KOG1050 Trehalose-6-phosphate 96.0 0.27 5.9E-06 59.1 18.4 189 479-689 239-438 (732)
154 PF11440 AGT: DNA alpha-glucos 95.8 0.43 9.2E-06 50.2 16.3 140 536-687 187-349 (355)
155 PF08288 PIGA: PIGA (GPI ancho 95.8 0.029 6.4E-07 48.7 6.7 71 320-401 14-86 (90)
156 PF06258 Mito_fiss_Elm1: Mitoc 95.6 0.79 1.7E-05 49.9 18.6 110 530-659 145-259 (311)
157 PF00343 Phosphorylase: Carboh 95.6 0.19 4.2E-06 59.7 14.4 149 523-681 435-601 (713)
158 COG3980 spsG Spore coat polysa 95.5 0.73 1.6E-05 48.8 16.7 139 532-707 159-305 (318)
159 PLN02152 indole-3-acetate beta 94.8 9.8 0.00021 43.7 28.9 140 531-689 261-415 (455)
160 PF04464 Glyphos_transf: CDP-G 94.0 0.53 1.1E-05 52.2 12.4 165 522-726 184-366 (369)
161 PF04101 Glyco_tran_28_C: Glyc 93.8 0.002 4.3E-08 63.1 -6.6 91 601-706 55-155 (167)
162 PF05159 Capsule_synth: Capsul 93.2 5.1 0.00011 42.4 17.6 103 529-655 114-224 (269)
163 COG1817 Uncharacterized protei 93.1 8 0.00017 41.7 18.3 54 626-686 253-309 (346)
164 PLN02992 coniferyl-alcohol glu 92.2 28 0.0006 40.4 28.8 79 601-689 338-425 (481)
165 COG3660 Predicted nucleoside-d 90.3 13 0.00029 39.2 15.8 112 529-660 159-276 (329)
166 cd03789 GT1_LPS_heptosyltransf 89.8 2.3 5E-05 45.1 10.7 98 534-655 124-223 (279)
167 PF00201 UDPGT: UDP-glucoronos 89.1 1.1 2.4E-05 51.8 8.1 131 531-702 276-416 (500)
168 PLN02670 transferase, transfer 86.4 23 0.0005 40.9 16.5 113 603-730 341-466 (472)
169 PLN03015 UDP-glucosyl transfer 85.9 74 0.0016 36.8 31.5 72 612-689 342-424 (470)
170 PRK10422 lipopolysaccharide co 85.0 8.3 0.00018 42.5 11.7 103 531-655 183-287 (352)
171 TIGR02195 heptsyl_trn_II lipop 84.5 9.7 0.00021 41.5 11.9 101 530-655 172-276 (334)
172 PF10087 DUF2325: Uncharacteri 83.9 2.5 5.5E-05 37.6 5.7 83 566-663 2-89 (97)
173 PLN02167 UDP-glycosyltransfera 83.3 28 0.0006 40.3 15.5 79 601-689 340-432 (475)
174 PF01075 Glyco_transf_9: Glyco 83.2 7.7 0.00017 40.1 10.0 103 530-655 104-208 (247)
175 PF03401 TctC: Tripartite tric 81.7 24 0.00051 37.7 13.2 151 533-708 79-245 (274)
176 PLN02764 glycosyltransferase f 81.6 62 0.0013 37.3 17.2 91 603-707 319-420 (453)
177 PLN03004 UDP-glycosyltransfera 80.8 36 0.00077 39.2 14.9 84 601-700 334-429 (451)
178 PLN02555 limonoid glucosyltran 80.1 49 0.0011 38.4 15.9 80 600-689 336-427 (480)
179 COG2327 WcaK Polysaccharide py 79.9 1.1E+02 0.0024 34.4 24.3 87 600-701 265-357 (385)
180 PRK05562 precorrin-2 dehydroge 79.8 59 0.0013 33.7 14.7 152 563-743 48-206 (223)
181 TIGR02201 heptsyl_trn_III lipo 79.7 19 0.00041 39.4 12.0 101 533-655 183-285 (344)
182 KOG0853 Glycosyltransferase [C 78.5 7.2 0.00016 44.9 8.2 100 430-563 205-304 (495)
183 TIGR02193 heptsyl_trn_I lipopo 78.3 22 0.00047 38.4 11.8 99 531-655 179-279 (319)
184 COG0859 RfaF ADP-heptose:LPS h 77.5 17 0.00038 39.8 10.8 98 532-655 176-276 (334)
185 PLN00164 glucosyltransferase; 76.8 43 0.00093 38.8 14.2 77 603-689 341-429 (480)
186 PLN02207 UDP-glycosyltransfera 74.6 82 0.0018 36.5 15.6 79 601-689 332-424 (468)
187 PF10933 DUF2827: Protein of u 74.1 35 0.00077 37.7 11.6 167 523-716 180-350 (364)
188 TIGR03609 S_layer_CsaB polysac 74.1 99 0.0021 33.0 15.4 86 547-655 190-275 (298)
189 PF12038 DUF3524: Domain of un 73.6 9.8 0.00021 37.5 6.6 77 365-449 57-134 (168)
190 KOG4626 O-linked N-acetylgluco 71.3 58 0.0013 38.5 12.8 191 522-740 751-949 (966)
191 PRK10964 ADP-heptose:LPS hepto 70.3 34 0.00073 37.1 10.8 96 534-655 181-278 (322)
192 PF03033 Glyco_transf_28: Glyc 69.9 2.3 4.9E-05 39.8 1.3 28 261-300 8-35 (139)
193 PRK10916 ADP-heptose:LPS hepto 69.4 46 0.001 36.5 11.7 98 533-654 182-285 (348)
194 PF01975 SurE: Survival protei 69.0 35 0.00075 34.7 9.7 39 239-303 1-39 (196)
195 PF03016 Exostosin: Exostosin 68.4 13 0.00027 39.7 6.9 70 615-685 227-299 (302)
196 PF04413 Glycos_transf_N: 3-De 68.2 16 0.00034 36.7 7.0 65 367-447 95-162 (186)
197 PF06925 MGDG_synth: Monogalac 67.2 27 0.00058 34.2 8.4 59 365-447 87-150 (169)
198 PF11997 DUF3492: Domain of un 66.4 6 0.00013 42.2 3.8 80 366-445 171-256 (268)
199 PF08660 Alg14: Oligosaccharid 64.4 22 0.00049 35.1 7.1 64 365-447 90-159 (170)
200 COG1703 ArgK Putative periplas 63.1 1.2E+02 0.0026 32.9 12.6 105 278-400 70-176 (323)
201 TIGR01470 cysG_Nterm siroheme 62.1 1.9E+02 0.0041 29.5 14.4 137 551-714 22-166 (205)
202 COG1618 Predicted nucleotide k 60.6 1.3E+02 0.0029 29.8 11.3 43 235-301 2-44 (179)
203 COG1647 Esterase/lipase [Gener 60.5 28 0.0006 36.1 7.0 44 352-397 71-114 (243)
204 KOG1192 UDP-glucuronosyl and U 59.8 2.1E+02 0.0046 32.7 15.3 139 532-704 278-431 (496)
205 PRK02122 glucosamine-6-phospha 56.7 27 0.00059 42.0 7.3 44 235-301 366-409 (652)
206 TIGR00087 surE 5'/3'-nucleotid 56.1 1.4E+02 0.003 31.5 11.6 38 239-303 1-38 (244)
207 PLN02534 UDP-glycosyltransfera 55.2 3.8E+02 0.0081 31.3 16.1 45 601-657 344-390 (491)
208 KOG1021 Acetylglucosaminyltran 54.4 95 0.0021 35.9 11.1 97 616-718 335-434 (464)
209 PRK13932 stationary phase surv 53.7 1.9E+02 0.0041 30.8 12.2 41 236-303 3-43 (257)
210 COG2910 Putative NADH-flavin r 52.9 12 0.00026 37.6 2.9 33 239-300 1-33 (211)
211 TIGR02990 ectoine_eutA ectoine 50.9 1.2E+02 0.0027 31.7 10.3 35 365-399 179-215 (239)
212 PF05686 Glyco_transf_90: Glyc 49.8 62 0.0013 36.6 8.4 62 666-731 257-319 (395)
213 TIGR00715 precor6x_red precorr 48.3 54 0.0012 34.7 7.2 83 592-686 165-252 (256)
214 PF15024 Glyco_transf_18: Glyc 45.9 2.5E+02 0.0054 33.1 12.4 156 531-732 276-458 (559)
215 PRK03359 putative electron tra 43.7 1.1E+02 0.0024 32.5 8.6 34 367-400 112-149 (256)
216 smart00672 CAP10 Putative lipo 43.4 1.2E+02 0.0027 32.0 9.0 48 680-731 203-250 (256)
217 PRK06988 putative formyltransf 42.6 1E+02 0.0022 33.6 8.5 19 278-299 16-34 (312)
218 PRK04020 rps2P 30S ribosomal p 40.8 1.7E+02 0.0036 30.0 9.0 113 542-677 47-161 (204)
219 COG1832 Predicted CoA-binding 40.3 2.1E+02 0.0046 27.4 8.9 118 223-393 4-123 (140)
220 PRK13934 stationary phase surv 39.5 2.8E+02 0.0061 29.6 10.9 38 239-303 1-38 (266)
221 PRK13933 stationary phase surv 39.2 3.4E+02 0.0073 28.8 11.4 38 239-303 1-38 (253)
222 PF09752 DUF2048: Uncharacteri 39.1 1.6E+02 0.0034 32.7 9.1 33 366-398 173-205 (348)
223 KOG0780 Signal recognition par 38.9 6.3E+02 0.014 28.7 13.6 176 534-729 156-342 (483)
224 PF10649 DUF2478: Protein of u 37.3 64 0.0014 31.7 5.2 40 616-655 84-129 (159)
225 PRK13935 stationary phase surv 35.6 4.2E+02 0.0092 28.1 11.4 35 364-398 83-128 (253)
226 PRK10840 transcriptional regul 34.9 4.7E+02 0.01 26.0 11.7 110 563-689 3-124 (216)
227 COG0496 SurE Predicted acid ph 34.5 3.1E+02 0.0067 29.1 10.1 38 239-303 1-38 (252)
228 PF13380 CoA_binding_2: CoA bi 33.8 3.7E+02 0.008 24.6 9.5 89 278-394 18-106 (116)
229 KOG0832 Mitochondrial/chloropl 33.8 5.5E+02 0.012 26.9 11.3 46 626-677 174-220 (251)
230 COG0569 TrkA K+ transport syst 33.3 1.2E+02 0.0026 31.3 6.9 34 366-399 65-102 (225)
231 TIGR01012 Sa_S2_E_A ribosomal 31.0 1.7E+02 0.0038 29.7 7.4 112 542-677 41-155 (196)
232 PF05728 UPF0227: Uncharacteri 30.9 3.6E+02 0.0079 27.0 9.7 31 370-400 61-91 (187)
233 PRK06718 precorrin-2 dehydroge 30.6 5.8E+02 0.013 25.8 15.5 92 621-713 67-165 (202)
234 KOG2452 Formyltetrahydrofolate 30.5 42 0.00091 37.9 3.0 38 239-307 1-38 (881)
235 COG4088 Predicted nucleotide k 30.3 1.1E+02 0.0025 31.5 5.8 51 348-398 56-108 (261)
236 PF13407 Peripla_BP_4: Peripla 30.2 3.9E+02 0.0084 27.1 10.2 73 586-658 16-89 (257)
237 COG4195 Phage-related replicat 29.8 66 0.0014 32.2 3.9 32 239-283 37-68 (208)
238 COG2204 AtoC Response regulato 29.2 6.1E+02 0.013 29.4 12.1 108 564-690 5-121 (464)
239 COG3171 Uncharacterized protei 29.2 49 0.0011 30.3 2.7 32 192-223 25-60 (119)
240 cd01020 TroA_b Metal binding p 29.0 2.7E+02 0.0059 29.3 8.9 89 619-712 47-136 (264)
241 PLN00016 RNA-binding protein; 28.9 49 0.0011 36.8 3.4 20 278-301 71-90 (378)
242 PLN02670 transferase, transfer 28.8 4.2E+02 0.0091 30.7 11.0 37 239-300 7-43 (472)
243 PRK12342 hypothetical protein; 28.5 1.4E+02 0.0031 31.6 6.5 34 367-400 109-146 (254)
244 PRK00676 hemA glutamyl-tRNA re 27.8 8.7E+02 0.019 26.9 13.3 125 562-710 173-305 (338)
245 PF04230 PS_pyruv_trans: Polys 27.2 6.5E+02 0.014 25.2 16.2 94 544-656 189-283 (286)
246 PRK11519 tyrosine kinase; Prov 27.1 6.5E+02 0.014 30.8 12.8 44 356-399 624-669 (719)
247 PLN02764 glycosyltransferase f 26.2 5.8E+02 0.013 29.5 11.4 38 239-301 6-43 (453)
248 PRK09213 pur operon repressor; 26.1 6.7E+02 0.014 26.9 11.1 43 356-398 118-161 (271)
249 PF03668 ATP_bind_2: P-loop AT 25.8 2.2E+02 0.0047 30.8 7.3 118 139-291 123-275 (284)
250 PRK04531 acetylglutamate kinas 25.7 1.7E+02 0.0036 33.2 6.9 55 530-602 35-91 (398)
251 PRK10360 DNA-binding transcrip 25.7 5.9E+02 0.013 24.3 10.7 74 616-689 37-116 (196)
252 TIGR00732 dprA DNA protecting 25.2 4.7E+02 0.01 26.9 9.6 121 544-682 82-217 (220)
253 PF04392 ABC_sub_bind: ABC tra 25.0 4.3E+02 0.0093 28.1 9.7 84 584-674 146-233 (294)
254 PF06258 Mito_fiss_Elm1: Mitoc 24.9 8.8E+02 0.019 26.4 12.1 139 530-677 111-259 (311)
255 cd07944 DRE_TIM_HOA_like 4-hyd 24.9 8.4E+02 0.018 25.8 15.8 154 543-716 104-265 (266)
256 PRK08229 2-dehydropantoate 2-r 24.9 73 0.0016 34.7 3.8 19 278-300 16-34 (341)
257 COG1519 KdtA 3-deoxy-D-manno-o 24.7 5.2E+02 0.011 29.5 10.2 102 533-656 51-153 (419)
258 PF02374 ArsA_ATPase: Anion-tr 24.6 1.3E+02 0.0027 32.8 5.5 66 239-328 1-70 (305)
259 CHL00200 trpA tryptophan synth 24.4 8.7E+02 0.019 25.8 14.9 122 531-674 91-231 (263)
260 COG2236 Predicted phosphoribos 24.3 1.3E+02 0.0028 30.5 5.1 46 346-392 9-54 (192)
261 PTZ00254 40S ribosomal protein 24.1 1.8E+02 0.0038 30.8 6.1 113 542-677 50-165 (249)
262 COG0300 DltE Short-chain dehyd 24.0 1.2E+02 0.0026 32.3 5.0 19 278-300 21-39 (265)
263 COG0482 TrmU Predicted tRNA(5- 23.2 1.9E+02 0.0041 32.2 6.4 33 367-400 94-126 (356)
264 COG4567 Response regulator con 23.2 2.4E+02 0.0053 27.6 6.3 107 562-687 8-123 (182)
265 PRK13288 pyrophosphatase PpaX; 23.0 6.2E+02 0.014 25.2 10.0 120 543-685 83-210 (214)
266 PRK08057 cobalt-precorrin-6x r 22.5 3.4E+02 0.0074 28.6 8.0 34 626-659 191-225 (248)
267 PLN03228 methylthioalkylmalate 22.3 6.6E+02 0.014 29.4 10.9 110 93-219 18-144 (503)
268 PF03568 Peptidase_C50: Peptid 22.3 2.9E+02 0.0063 31.0 7.9 102 535-656 262-374 (383)
269 PLN02327 CTP synthase 22.3 8.3E+02 0.018 29.0 11.6 107 546-659 280-401 (557)
270 PRK15408 autoinducer 2-binding 22.2 8.8E+02 0.019 26.4 11.7 42 618-659 73-115 (336)
271 PF03308 ArgK: ArgK protein; 22.2 4E+02 0.0086 28.5 8.3 102 278-399 48-153 (266)
272 PLN02534 UDP-glycosyltransfera 22.2 8.2E+02 0.018 28.5 11.8 37 239-300 9-45 (491)
273 PF06377 Adipokin_hormo: Adipo 22.0 32 0.0007 26.7 0.2 14 196-209 2-15 (48)
274 PF03358 FMN_red: NADPH-depend 21.9 1.5E+02 0.0032 28.0 4.9 39 239-299 1-39 (152)
275 COG3181 Uncharacterized protei 21.9 9E+02 0.02 26.6 11.2 144 546-708 133-288 (319)
276 TIGR03642 cas_csx13 CRISPR-ass 21.8 2.9E+02 0.0063 26.0 6.5 98 278-390 9-116 (124)
277 TIGR01568 A_thal_3678 uncharac 21.6 1.6E+02 0.0034 24.6 4.1 50 182-232 7-58 (66)
278 PF02601 Exonuc_VII_L: Exonucl 21.6 1E+03 0.022 25.6 13.5 44 530-573 40-87 (319)
279 PRK05380 pyrG CTP synthetase; 21.1 8.8E+02 0.019 28.6 11.5 107 546-659 271-382 (533)
280 PLN02657 3,8-divinyl protochlo 20.4 75 0.0016 35.6 2.8 51 221-300 43-93 (390)
No 1
>PLN00142 sucrose synthase
Probab=100.00 E-value=7.5e-186 Score=1605.23 Aligned_cols=748 Identities=70% Similarity=1.167 Sum_probs=725.7
Q ss_pred CccchHHHHHHhhhcchhhhhhhccCcHHHHHhhcceeeeeCCeEEEEEcCCCceEEEEEEecCCcceeecCHhHhhhhh
Q 036539 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVKVNSDDLSVEAITVTDFLKFK 80 (749)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (749)
||+|||++||++++++..+++++.+|+||++|++||||||.|||||||||||||+|||||||++||+||+|||+|||+||
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~yl~~k 122 (815)
T PLN00142 43 LQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAIVLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKFK 122 (815)
T ss_pred ccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhhhccCCeeEEEEcCCCcceEEEEEEhhhCceeeecHHHhhhhh
Confidence 68999999999999888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCceeeecccccCCCCccCCCCCCCcchhhhhhhhhhcccCCCCCCchHHHHHhhcccCCceeeccccc
Q 036539 81 ELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGISFVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNL 160 (749)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (749)
|+|||+++ +++++|||||+|||++|||+|+|+||||||+|||||||||||+|++++++||||||.|+|+|++|||||||
T Consensus 123 e~~~~~~~-~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~ 201 (815)
T PLN00142 123 EELVDGSW-NDNFVLELDFEPFNASFPRPTLSSSIGNGVQFLNRHLSSKLFRDKESLEPLLDFLRAHNHKGETLMLNDRI 201 (815)
T ss_pred HhhcCccc-CCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHhhccCchhhhhHHHHHHHhhcCCceeeecCCC
Confidence 99999965 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCChhhHHHHHhhcCCccccCccHHHHHHHHHHHHHhhcCCCcchHHHhhhcCCceeE
Q 036539 161 NTAEKLQMALIVAEVSLSTLPKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240 (749)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~pm~~r 240 (749)
+|+++|++||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+|+|++|||++||+|++||||+||
T Consensus 202 ~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p~~~~~e~f~~~~p~~~~ 281 (815)
T PLN00142 202 QTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEKGWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFN 281 (815)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCCChhHHHHHHhhhhHhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCcc
Q 036539 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTK 320 (749)
Q Consensus 241 Ivivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~ 320 (749)
|+|||+||||+|.+++|.||||||++||+|||||||++|+++|+++||+|+|+|+|+||.+++..+++|+++++.+.+++
T Consensus 282 i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~ 361 (815)
T PLN00142 282 VVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTE 361 (815)
T ss_pred hheecccccccccccCCCCCCCCceehHHHHHHHHHHHHHHHHHhcCCCccceeEEEEeccCCccCCcccCcceeccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCC
Q 036539 321 HSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHAL 400 (749)
Q Consensus 321 ~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l 400 (749)
+++|+|+|+++.++++++|++|+++|||+..|+.++.+.+.+..+++||+||+|||++|++|.++++++|+|+|+|+|++
T Consensus 362 ~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL 441 (815)
T PLN00142 362 HSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHAL 441 (815)
T ss_pred ceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccc
Confidence 99999999999778999999999999999999999999988777789999999999999999999999999999999999
Q ss_pred cccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCc
Q 036539 401 EKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480 (749)
Q Consensus 401 ~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~k 480 (749)
++.|+..++.+|+..+..|+|++|+++|.++++.||+||++|+++++++++.++||++|.+|+||++|++++|++++.+|
T Consensus 442 ~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~k 521 (815)
T PLN00142 442 EKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK 521 (815)
T ss_pred hhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHcc
Q 036539 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRL 560 (749)
Q Consensus 481 i~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~ 560 (749)
++|||||+|...|.|+.....+++.+++.|++++|++.+.++++|++.++++++|+++||+++.||++.|++|++++.+.
T Consensus 522 i~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l 601 (815)
T PLN00142 522 FNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRL 601 (815)
T ss_pred eeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHh
Confidence 99999999999999999888888899999999999999999999988788899999999999999999999999999877
Q ss_pred CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcH
Q 036539 561 RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGL 640 (749)
Q Consensus 561 ~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGL 640 (749)
+++++|+|+|++.++..+.+.++.++++++.++++++++.++|+|+|.+.+..+.+++++++++++|+||+||.+|+||+
T Consensus 602 ~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGL 681 (815)
T PLN00142 602 RELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGL 681 (815)
T ss_pred CCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCH
Confidence 78899999999855456667788888899999999999999999999888788889999999976899999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 036539 641 TVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720 (749)
Q Consensus 641 tvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a 720 (749)
+++|||+||+|||||+.||+.|+|.+|++|++++|+|++++|++|.+++++|..||+.|++|+++|++++.++|||+.++
T Consensus 682 vvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A 761 (815)
T PLN00142 682 TVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYA 761 (815)
T ss_pred HHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred HHHHHHHHHhHhHHhhhhhhhHHhhhccC
Q 036539 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749 (749)
Q Consensus 721 ~~ll~ly~~~~~~~~~~~~~~~~~~~~~~ 749 (749)
++++++..+||||+++|+++|+|++||||
T Consensus 762 ~rll~L~~~~~~~~~~~~~~~~~~~~y~~ 790 (815)
T PLN00142 762 ERLLTLGGVYGFWKYVSKLERRETRRYLE 790 (815)
T ss_pred HHHHHHHhhcchhhhcchHhHHHHHHHHH
Confidence 99999999999999999999999999996
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=2.4e-184 Score=1593.34 Aligned_cols=748 Identities=61% Similarity=1.047 Sum_probs=724.7
Q ss_pred CccchHHHHHHhhhcchhhhhhhccCcHHHHHhhcceeeeeCCeEEEEEcCCCceEEEEEEecCCcceeecCHhHhhhhh
Q 036539 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVKVNSDDLSVEAITVTDFLKFK 80 (749)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (749)
||+|||++||+++|.+..+++++.+|+||++|++||||||.|||||||||||||+|||||||++||+||+||++|||+||
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~yl~~k 98 (784)
T TIGR02470 19 LLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVNVEELSVEELTISEYLDFK 98 (784)
T ss_pred ccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEEhhhCceeeecHHHHhhhh
Confidence 68999999999999887778899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCceeeecccccCCCCccCCCCCCCcchhhhhhhhhhcccCCCCCCchHHHHHhhcccCCceeeccccc
Q 036539 81 ELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGISFVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNL 160 (749)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (749)
|+|||++ .+++++|||||+|||++|||+|+||||||||+|||||||||||+|++++++||||||.|+|+|++|||||||
T Consensus 99 e~~~~~~-~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~ 177 (784)
T TIGR02470 99 EQLVNGH-PNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNFLRVHNYNGIQLMINDRI 177 (784)
T ss_pred HhhcCcc-cCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHHHHHHhccCCceeeecCCC
Confidence 9999995 489999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCChhhHHHHHhhcCCccccCccHHHHHHHHHHHHHhhcCCCcchHHHhhhcCCceeE
Q 036539 161 NTAEKLQMALIVAEVSLSTLPKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240 (749)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~pm~~r 240 (749)
+|+++|++||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+|+|++|||++||+|++||||+||
T Consensus 178 ~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p~~~~~e~f~~~~p~~~r 257 (784)
T TIGR02470 178 QSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAPDPSVLEAFLGRIPMVFN 257 (784)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCCChhHHHHHHhhCCccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCcc
Q 036539 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTK 320 (749)
Q Consensus 241 Ivivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~ 320 (749)
|+|||+|||++|.+++|.||||||++||++||||||++|+++|+++||+|+|+|+|+||.+++..+++|+++.+.+.+++
T Consensus 258 Ia~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~~~~~ 337 (784)
T TIGR02470 258 VVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEKVYGTE 337 (784)
T ss_pred EEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccccccccccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCccCCc-cccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecC
Q 036539 321 HSNILRVPFKTDKG-ILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHA 399 (749)
Q Consensus 321 ~~~I~rvp~~~~~~-~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~ 399 (749)
+++|+|+|+++..+ .+++|++|+++|||+..|+.++.+.+.+..+++||+||+|||+++++|.++++++|+|+|+|+|+
T Consensus 338 ~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~lgVP~v~t~Hs 417 (784)
T TIGR02470 338 HAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLGVTQCTIAHA 417 (784)
T ss_pred ceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhcCCCEEEECCc
Confidence 99999999999877 79999999999999999999999998877778999999999999999999999999999999999
Q ss_pred CcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCC
Q 036539 400 LEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479 (749)
Q Consensus 400 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ 479 (749)
++++|+..++.+|...+.+|++++++++|.++++.||+|||+|+++++++++.++||++|..||||++|++++|++++++
T Consensus 418 L~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~ 497 (784)
T TIGR02470 418 LEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDP 497 (784)
T ss_pred chhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHc
Q 036539 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKR 559 (749)
Q Consensus 480 ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~ 559 (749)
|++|||||+|.+.|+|++....+....++.+++++|++.+.++++|++.++++|+|+++||+++.||++.|++|+++++.
T Consensus 498 Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~ 577 (784)
T TIGR02470 498 KFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPK 577 (784)
T ss_pred CeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHh
Confidence 99999999999999999988888888899999999999999999999888999999999999999999999999999877
Q ss_pred cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCc
Q 036539 560 LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFG 639 (749)
Q Consensus 560 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fG 639 (749)
+.++++|+|+|++..+..+.|+++.+++++++++++++++.++|+|+|++.+.....++++++++++|+||+||++|+||
T Consensus 578 l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFG 657 (784)
T TIGR02470 578 LRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFG 657 (784)
T ss_pred hCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCC
Confidence 77789999999987767788888888999999999999999999999987666778899999987789999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 036539 640 LTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719 (749)
Q Consensus 640 LtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 719 (749)
++++|||+||+|||||+.||+.|+|.++.+|++++|+|++++|++|.+++++|..||+.|++|+++|++++.++|||+.+
T Consensus 658 LvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~ 737 (784)
T TIGR02470 658 LTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIY 737 (784)
T ss_pred HHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHHHHHHHHHhHhHHhhhhhhhHHhhhccC
Q 036539 720 ANKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749 (749)
Q Consensus 720 a~~ll~ly~~~~~~~~~~~~~~~~~~~~~~ 749 (749)
+++++++.++||||+++|+++|+|++||||
T Consensus 738 A~~ll~l~~~~~~~~~~~~~~~~~~~~y~~ 767 (784)
T TIGR02470 738 SERLLTLAGIYGFWKFVSKLEREETRRYLE 767 (784)
T ss_pred HHHHHHHHhhhhHhhhccHHHHHHHHHHHH
Confidence 999999999999999999999999999996
No 3
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=100.00 E-value=2.8e-162 Score=1308.61 Aligned_cols=515 Identities=62% Similarity=1.035 Sum_probs=446.4
Q ss_pred CccchHHHHHHhhhcchhhhhhhccCcHHHHHhhcceeeeeCCeEEEEEcCCCceEEEEEEecCCcceeecCHhHhhhhh
Q 036539 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVKVNSDDLSVEAITVTDFLKFK 80 (749)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (749)
||+|||++||+++|+++.++.+..+|+||++|++||||||.|||||||||||||+|||||||+++|+||+|||+|||+||
T Consensus 36 l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v~lavRPrpg~WeyvRv~~~~L~vE~ltvseyL~fK 115 (550)
T PF00862_consen 36 LLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWVALAVRPRPGVWEYVRVNVDDLSVEELTVSEYLKFK 115 (550)
T ss_dssp EEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEEEEEEEEETTEEEEEEEESSSSEEEEE-HHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeEEEEEcCCCccEEEEEEEhhhCcceecCHHHHHHHH
Confidence 68999999999999887777788899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCceeeecccccCCCCccCCCCCCCcchhhhhhhhhhcccCCCCCCchHHHHHhhcccCCceeeccccc
Q 036539 81 ELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGISFVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNL 160 (749)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (749)
|+|||+ .++++++|||||+|||++||+|++||||||||+|||||||||||+|++++++||+|||.|+|+|++|||||||
T Consensus 116 E~LV~~-~~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~LSsklf~d~e~~~~Ll~fL~~h~~~G~~Lmlndri 194 (550)
T PF00862_consen 116 ERLVDG-SANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHLSSKLFQDKESLEPLLDFLRVHNYNGQQLMLNDRI 194 (550)
T ss_dssp HHHHHS-S-SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHHHHHHTT-HHHHHHHHHHHHH-EETTEEBSB-TT-
T ss_pred HHHcCC-ccCCCCeeeeecccccccCCCCCCcccccccHHHHHHHHHHHhcCChHHHHHHHHHHHHhccCCeEeeecCCC
Confidence 999999 5789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCChhhHHHHHhhcCCccccCccHHHHHHHHHHHHHhhcCCCcchHHHhhhcCCceeE
Q 036539 161 NTAEKLQMALIVAEVSLSTLPKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240 (749)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~pm~~r 240 (749)
+|+++||+||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+|+|+||||++||+|++||||+++
T Consensus 195 ~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta~rv~et~~lL~dll~aPdp~~LE~Fl~RiPmvf~ 274 (550)
T PF00862_consen 195 QSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTAERVLETMHLLSDLLEAPDPSTLEKFLSRIPMVFN 274 (550)
T ss_dssp -SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBHHHHHHHHHHHHHHHHS--HHHHHHHHHHS---SE
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHhCCCchHHHHHhhhcceeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCcc
Q 036539 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTK 320 (749)
Q Consensus 241 Ivivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~ 320 (749)
||++|+||||+|+||+|.||||||++||+|||||||++|..+++.+|.+|.|+|+|+|+.+|++.|++|+++++++.+++
T Consensus 275 vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~gt~ 354 (550)
T PF00862_consen 275 VVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAKGTTCNQRLEKVSGTE 354 (550)
T ss_dssp EEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTTCGGGTSSEEEETTES
T ss_pred EEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCcCCCccccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCC
Q 036539 321 HSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHAL 400 (749)
Q Consensus 321 ~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l 400 (749)
|++|+|+||++.+|++++|+||+++|||+++|+.++.+++.++++++||+||+||+++|++|+++++++|+|+|+|+|++
T Consensus 355 ~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsL 434 (550)
T PF00862_consen 355 NARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSL 434 (550)
T ss_dssp SEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-
T ss_pred CcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhhcCCceehhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCc
Q 036539 401 EKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480 (749)
Q Consensus 401 ~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~k 480 (749)
+++||+.++++|++++.+|||+||+++|.++|+.||+|||||+|+++|+++++|||++|.+||||++|++++||++|+||
T Consensus 435 ek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI~g~~~~~gqyes~~~ftlpgLyrvv~Gi~vFdPk 514 (550)
T PF00862_consen 435 EKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEIAGQKDTVGQYESHKAFTLPGLYRVVNGIDVFDPK 514 (550)
T ss_dssp HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHHHB-SSSBHTTGGGSSEEETTTEEEEES--TT-TT
T ss_pred ccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhhcCCccccCCccchhhcchHhHHhhhccccccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCCCCCCCchHHhhhhccchhhHHhhcc
Q 036539 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYN 516 (749)
Q Consensus 481 i~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~ 516 (749)
|+|||||+|.++|+|++++++|++.+|++||++||+
T Consensus 515 fNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llfs 550 (550)
T PF00862_consen 515 FNIVSPGADESIYFPYTEKERRLTSLHPEIEELLFS 550 (550)
T ss_dssp EEE------TTTS--TT-TTTS-GGGHHHHHHHHH-
T ss_pred ccccCCCCCcceecCCccccccchhhhHHHHHHhcC
Confidence 999999999999999999999999999999999985
No 4
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=1.9e-58 Score=547.35 Aligned_cols=456 Identities=26% Similarity=0.448 Sum_probs=354.2
Q ss_pred ceeEEEEEcccccCCCccc-CC-CCCcCcceehhHHHHHHHHHHHHHHHHHcC--CcccceEEEEeCCCCCC-CCCccCC
Q 036539 237 ILFNVVIFSPHGYFGQADV-LG-LPDTGGQVVYILDQVKALEEELLLRIKQQG--LYIKPQIVVVTRLIPDA-RGTKCNQ 311 (749)
Q Consensus 237 m~~rIvivs~h~~~~~~~~-~g-~p~tGG~~vyvld~araL~~eLa~~L~~~G--~eV~~~i~V~T~~~p~~-~g~~~~~ 311 (749)
+-|+|++||+||+|..+++ +| .+|||||.+||. +||++|++.| |+|+ |+|+.+.+. .+..|.+
T Consensus 168 ~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~--------ELAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~ 235 (1050)
T TIGR02468 168 KKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVV--------ELARALGSMPGVYRVD----LLTRQVSSPDVDWSYGE 235 (1050)
T ss_pred CceEEEEEccccCccccCcccCCCCCCCChHHHHH--------HHHHHHHhCCCCCEEE----EEeCCcCccccccccCC
Confidence 3589999999999987765 88 599999999999 5666678888 7888 999997643 3455666
Q ss_pred ccccc------------cCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHH-------c----CCCc
Q 036539 312 ELEPI------------EGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEF-------L----GGKP 368 (749)
Q Consensus 312 ~~e~i------------~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~-------l----~~~p 368 (749)
+.|.+ ...+|++|+|+|+++.. +++++..+|||+..|...+...+.+. . ...|
T Consensus 236 p~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~----~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~p 311 (1050)
T TIGR02468 236 PTEMLTPRSSENDGDEMGESSGAYIIRIPFGPRD----KYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWP 311 (1050)
T ss_pred ccccccccccccccccccCCCCeEEEEeccCCCC----CCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCC
Confidence 65443 24468999999999863 36788999999999999888876531 1 1249
Q ss_pred eEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccC----CCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 369 DLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYE----DSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 369 DIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~----~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
||||+|||+++.++.++++.+|+|+|+|.|++...|+. .+...+...+..|++..++.+|..++..||.|||+|.+
T Consensus 312 DvIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~q 391 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQ 391 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHH
Confidence 99999999999999999999999999999999877653 23345666777888899999999999999999999999
Q ss_pred HHhhcCCCCCccccccccccccchhh-----hccCCC---CCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhcc
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRV-----VKGIDV---LDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYN 516 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v-----~~Gi~~---~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~ 516 (749)
+++ +||..|.+|. |.+|++ .+|++. +.+|+.|||||||++.|.|......+... ..++....
T Consensus 392 E~~------eq~~lY~~~~-~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~---~~~~~~~~ 461 (1050)
T TIGR02468 392 EIE------EQWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETE---GNEEHPAK 461 (1050)
T ss_pred HHH------HHHHHhccCC-chhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhc---cccccccc
Confidence 998 3454444444 444433 334442 46799999999999999986432211000 00000000
Q ss_pred ccc--hhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC--CeEEEEEeccCCCCCCcchhHHHHHHHHHH
Q 036539 517 KED--NNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRN--LVNLVIVGAFFDPSKSKDREETAEIKKMHA 592 (749)
Q Consensus 517 ~~~--~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~--~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~ 592 (749)
+.. .......+.++++|+|+++||+++.||++.|++|++++++..+ ++. +|+|+++. .+........+...+.+
T Consensus 462 ~~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd-~d~l~~~~~~~l~~L~~ 539 (1050)
T TIGR02468 462 PDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDD-IDEMSSGSSSVLTSVLK 539 (1050)
T ss_pred ccchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCch-hhhhhccchHHHHHHHH
Confidence 000 0001112236789999999999999999999999999975433 444 46677643 11111112234677889
Q ss_pred HHHHcCCCCcEEEecCccCcCChHHHHHHHHccC----cEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCc
Q 036539 593 LMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTK----GAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGV 668 (749)
Q Consensus 593 li~~~~L~~~V~flG~~~~~~~~~el~~~la~aa----dvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~ 668 (749)
+++++++.++|.|+| .++.+++..+|+. + |+||+||.+|+||++++||||||+|||||+.||+.|+|.++.
T Consensus 540 li~~lgL~g~V~FlG----~v~~edvp~lYr~-Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~ 614 (1050)
T TIGR02468 540 LIDKYDLYGQVAYPK----HHKQSDVPDIYRL-AAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLD 614 (1050)
T ss_pred HHHHhCCCCeEEecC----CCCHHHHHHHHHH-hhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCC
Confidence 999999999999999 6778899999884 4 799999999999999999999999999999999999999999
Q ss_pred eEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 669 SGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 669 ~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
+|++++|.|++++|++|.+ +++|++.|++|+++|++++ ++|||+.++++|++.+...
T Consensus 615 nGlLVdP~D~eaLA~AL~~----LL~Dpelr~~m~~~gr~~v-~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 615 NGLLVDPHDQQAIADALLK----LVADKQLWAECRQNGLKNI-HLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred cEEEECCCCHHHHHHHHHH----HhhCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHH
Confidence 9999999999999999965 4589999999999999998 5799999999999998876
No 5
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=9.5e-59 Score=510.92 Aligned_cols=486 Identities=38% Similarity=0.581 Sum_probs=427.5
Q ss_pred ecccccCCHHHHHHHHHHHHHHhccCCCCCChhhHHHHHhhcCCccccCccHHHHHHHHHHHHHhhcCCCcchHHHhhhc
Q 036539 155 MINDNLNTAEKLQMALIVAEVSLSTLPKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSS 234 (749)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 234 (749)
|.||++++...+|+++.+|+..++.. .+||+..|.+.++..++++|||.++.+|.+++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999998
Q ss_pred CCceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccc
Q 036539 235 LPILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELE 314 (749)
Q Consensus 235 ~pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e 314 (749)
++. ++|.||+||+++|+++++++|+.++..+..+.+.+++++|.|++...|...| +..+
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 565 8999999999999999999999999999999999999999999999988765 3455
Q ss_pred cccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEE
Q 036539 315 PIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQA 394 (749)
Q Consensus 315 ~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v 394 (749)
...+..+++|+++|++ ++.+|+ +.+||++..|+ .+...+.+.+++ ||++|.++++.+..+.+++.+.|++.+
T Consensus 122 ~~~~~~~~~il~~~~~----~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPFG----ILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEeccc----hhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 6666778999999984 445677 88899999998 677788888777 999999999999999999999999999
Q ss_pred EEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCcccccccccccc-chhhhcc
Q 036539 395 TIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPG-LCRVVKG 473 (749)
Q Consensus 395 ~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~-ly~v~~G 473 (749)
.+.|.++..+++..+.+|+.+...|+++++|.++...++.+| ++++++++++.....++|+++..+++|. .++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 8999999999999999999999999999 9999999
Q ss_pred CCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHH
Q 036539 474 IDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEW 553 (749)
Q Consensus 474 i~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA 553 (749)
+++|.++++++++|-|.+.+.+.-. .+++. + ++
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~~------~~~~~----------------i---~~---------------------- 304 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAFT------LLHDS----------------I---PE---------------------- 304 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhHH------hhhcc----------------c---CC----------------------
Confidence 9999999999999999988776211 11000 0 00
Q ss_pred HHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECC
Q 036539 554 YGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPA 633 (749)
Q Consensus 554 ~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS 633 (749)
...++.+++++|+.- .+++++|+.++.++|+++++++++.++++|.-. .....+.|++++++..++++|+
T Consensus 305 -----~~~~~~hl~~~g~~G--~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~---s~~~~~~yrl~adt~~v~~qPa 374 (495)
T KOG0853|consen 305 -----PSISSEHLVVAGSRG--YDERDSENVEYLKELLSLIEEYDLLGQFVWFLP---STTRVAKYRLAADTKGVLYQPA 374 (495)
T ss_pred -----CCCCceEEEEecCCC--ccccchhhHHHHHHHHHHHHHhCccCceEEEec---CCchHHHHHHHHhcceEEecCC
Confidence 122456777777321 457899999999999999999999766655532 4445677999999888999999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 036539 634 LYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINEC 713 (749)
Q Consensus 634 ~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ 713 (749)
. |.||++.+|||+||+|||||+.||+.|+|.++.+|++++| +.+ ....+.+++.+|..||++|.+|+++|+++|++.
T Consensus 375 ~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e-~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~ 451 (495)
T KOG0853|consen 375 N-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQE-AVAELADALLKLRRDPELWARMGKNGLKRVKEM 451 (495)
T ss_pred C-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 8 9999999999999999999999999999999999999999 444 333344444678899999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhHhHHhhhhhhhHHhhhccC
Q 036539 714 YTWKIYANKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749 (749)
Q Consensus 714 ysw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~~~~~ 749 (749)
|||+++.+++.++...|.+|+.++..++.+.+||++
T Consensus 452 fs~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (495)
T KOG0853|consen 452 FSWQHYSERIASVLGKYLQWEKVSSLDSLEDRRYIS 487 (495)
T ss_pred HhHHHHHHHHHHHhHhcCCcccccccccccccccHH
Confidence 999999999999999999999999999999998864
No 6
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=2.8e-51 Score=463.33 Aligned_cols=426 Identities=29% Similarity=0.529 Sum_probs=314.2
Q ss_pred eEEEEEcccccCCCcc-cCC-CCCcCcceehhHHHHHHHHHHHHHHHHHcCC--cccceEEEEeCCCCCCC-CCccCCcc
Q 036539 239 FNVVIFSPHGYFGQAD-VLG-LPDTGGQVVYILDQVKALEEELLLRIKQQGL--YIKPQIVVVTRLIPDAR-GTKCNQEL 313 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~-~~g-~p~tGG~~vyvld~araL~~eLa~~L~~~G~--eV~~~i~V~T~~~p~~~-g~~~~~~~ 313 (749)
++|+++|+||+|+|.+ ++| .|+.||+++|+. +|+++|+++|| +|+ |+|+.++... +..+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4799999999999998 777 499999999999 77777899997 899 9998765421 12232223
Q ss_pred ccccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcE
Q 036539 314 EPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQ 393 (749)
Q Consensus 314 e~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~ 393 (749)
+.+ ..++.++|+|+... .|.++...++|+..+...+.+.+.+. ..+|||||+|++.++.++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHLRQQ-GHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHHHHc-CCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 222 24789999997643 23455667788777776666655432 34799999999888889999999999999
Q ss_pred EEEecCCcccccC---CCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhh
Q 036539 394 ATIAHALEKTKYE---DSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRV 470 (749)
Q Consensus 394 v~t~H~l~~~k~~---~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v 470 (749)
|+|.|++...+.. .....+..+...|.+......++..++.+|.||++|.+++.. + +..
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~------~------------~~~ 202 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEE------Q------------YAL 202 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHH------H------------HHh
Confidence 9999986432210 011111222223344444445778899999999999765441 1 111
Q ss_pred hccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHH
Q 036539 471 VKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGL 550 (749)
Q Consensus 471 ~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~L 550 (749)
..|++ ..|+.+||||+|.+.|.|........ .+.. ..+.++. ++++++|+++||+.+.||++.|
T Consensus 203 ~~~~~--~~ki~vIpnGvd~~~f~~~~~~~~~~-----~~~~-------~~~~~~~--~~~~~~i~~vGrl~~~Kg~~~l 266 (439)
T TIGR02472 203 YDSYQ--PERMQVIPPGVDLSRFYPPQSSEETS-----EIDN-------LLAPFLK--DPEKPPILAISRPDRRKNIPSL 266 (439)
T ss_pred ccCCC--ccceEEECCCcChhhcCCCCccccch-----hHHH-------HHHhhcc--ccCCcEEEEEcCCcccCCHHHH
Confidence 12344 67999999999999987753221100 0000 0011232 4567899999999999999999
Q ss_pred HHHHHHhHccCCCeEEE-EEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHcc---C
Q 036539 551 TEWYGKNKRLRNLVNLV-IVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADT---K 626 (749)
Q Consensus 551 ieA~~~l~~~~~~v~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~a---a 626 (749)
++|++++....+..+++ |+|+|++ ......+..++.+++.++++++++.++|+|+| .++.+++..+|+.+ +
T Consensus 267 i~A~~~l~~~~~~~~l~li~G~g~~-~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g----~~~~~~~~~~~~~a~~~~ 341 (439)
T TIGR02472 267 VEAYGRSPKLQEMANLVLVLGCRDD-IRKMESQQREVLQKVLLLIDRYDLYGKVAYPK----HHRPDDVPELYRLAARSR 341 (439)
T ss_pred HHHHHhChhhhhhccEEEEeCCccc-cccccHHHHHHHHHHHHHHHHcCCCceEEecC----CCCHHHHHHHHHHHhhcC
Confidence 99998754332334554 5576654 11111222334566778899999999999999 67788999998842 2
Q ss_pred cEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 036539 627 GAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEG 706 (749)
Q Consensus 627 dvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a 706 (749)
|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++++|+|++++|++|.++ ++||+.+++|+++|
T Consensus 342 Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~l----l~~~~~~~~~~~~a 417 (439)
T TIGR02472 342 GIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDA----LSDSSQWQLWSRNG 417 (439)
T ss_pred CEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHH----HhCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999654 47999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHHHH
Q 036539 707 LKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 707 ~~~v~~~ysw~~~a~~ll~ly 727 (749)
++++.++|||+.++++|+++.
T Consensus 418 ~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 418 IEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999999999875
No 7
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=4.6e-44 Score=407.51 Aligned_cols=427 Identities=18% Similarity=0.225 Sum_probs=289.8
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccC-Cccccc-
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCN-QELEPI- 316 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~-~~~e~i- 316 (749)
|||+|||.+.+|- ..+||...++. .|+++|+++||+|. |+|+.++........ .....+
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999998874 35899999999 77777899999999 999887543211000 000000
Q ss_pred --------cCccceEEEEecCccCCccccccccccccccch---HH---HHHHHHHHHHHHcCCCceEEEEcCCCchHHH
Q 036539 317 --------EGTKHSNILRVPFKTDKGILHRWVSRFDVYPYL---EG---FAQDATTMILEFLGGKPDLIIGNYSDGNLVA 382 (749)
Q Consensus 317 --------~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl---~~---f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva 382 (749)
....++.+++++.... ..+..++.+. .+ |...+. ++...+..+|||||+|+|.+++++
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~~-------~~~~~~y~~~d~~~r~~~f~~~~~-~~~~~~~~~pDiiH~h~w~~~~~~ 133 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPHL-------FDRPSGYGYPDNGERFAFFSWAAA-EFAEGLDPRPDIVHAHDWHTGLIP 133 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHHH-------cCCCCCCCCcChHHHHHHHHHHHH-HHHHhcCCCCceEEECCcHHHHHH
Confidence 0123567776664221 2223333332 22 333333 333444669999999999999998
Q ss_pred HHHHHcC-----CCcEEEEecCCcccc-cCC-----Ccchhhhc-CcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcC
Q 036539 383 SVMASKL-----GITQATIAHALEKTK-YED-----SDVKWKEL-DPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSK 450 (749)
Q Consensus 383 ~lla~~~-----gvp~v~t~H~l~~~k-~~~-----s~~~~~~~-~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~ 450 (749)
.++++.. ++|+|+|+|++.... ++. ..+.+..+ .....+...+...+.+++.||.|+|+|...++...
T Consensus 134 ~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~ 213 (466)
T PRK00654 134 ALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREIT 213 (466)
T ss_pred HHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhc
Confidence 8888653 799999999985321 100 00011100 01111111233345678999999999988776432
Q ss_pred CCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccc-hhhHHhhccccchhhhcCccCC
Q 036539 451 DRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFH-PEIEELLYNKEDNNEHIGYLAD 529 (749)
Q Consensus 451 ~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~-~~~~~~l~~~~~~~~~~g~l~~ 529 (749)
... + ++.+.+.+ .....|+.+||||+|.+.|.|.++..... .+. ..++.+.-+....++++|+. +
T Consensus 214 ~~~--~----~~gl~~~~------~~~~~ki~vI~NGid~~~~~p~~~~~~~~-~~~~~~~~~k~~~k~~l~~~~gl~-~ 279 (466)
T PRK00654 214 TPE--F----GYGLEGLL------RARSGKLSGILNGIDYDIWNPETDPLLAA-NYSADDLEGKAENKRALQERFGLP-D 279 (466)
T ss_pred ccc--C----CcChHHHH------HhcccCceEecCCCCccccCCccCccccc-ccChhhhhchHHHHHHHHHHhCCC-C
Confidence 210 0 00111000 11256899999999999998864321000 000 00011111122345667873 3
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCc
Q 036539 530 RKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQ 609 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~ 609 (749)
++.++|+++||+.+.||++.|++|++++.+. +++|+|+|+|.. .+.+.+++++++++ .++.+.+
T Consensus 280 ~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~----------~~~~~l~~l~~~~~--~~v~~~~-- 343 (466)
T PRK00654 280 DDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQLVLLGTGDP----------ELEEAFRALAARYP--GKVGVQI-- 343 (466)
T ss_pred CCCcEEEEeeccccccChHHHHHHHHHHHhc--CCEEEEEecCcH----------HHHHHHHHHHHHCC--CcEEEEE--
Confidence 4688999999999999999999999998753 799999998854 23567888888886 4566543
Q ss_pred cCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------ceEEEECCCCHHHHHH
Q 036539 610 SDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDG------VSGFHIDPYNGDESSD 683 (749)
Q Consensus 610 ~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg------~~G~lv~p~d~e~lA~ 683 (749)
..+.+.+..+++ ++|++|+||.+|+||++++|||+||+|+|+|+.||+.|+|.++ .+|++++|+|++++++
T Consensus 344 --g~~~~~~~~~~~-~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~ 420 (466)
T PRK00654 344 --GYDEALAHRIYA-GADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLR 420 (466)
T ss_pred --eCCHHHHHHHHh-hCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHH
Confidence 223445667788 5999999999999999999999999999999999999999988 8999999999999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 684 KIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 684 aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+|.+++. +..+++.|.+|++++++ ++|||+.++++|+++|+.
T Consensus 421 ~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 421 ALRRALE-LYRQPPLWRALQRQAMA---QDFSWDKSAEEYLELYRR 462 (466)
T ss_pred HHHHHHH-HhcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHHH
Confidence 9988763 34578889999988863 689999999999999974
No 8
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=3e-43 Score=392.35 Aligned_cols=399 Identities=21% Similarity=0.278 Sum_probs=296.3
Q ss_pred EEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCcc
Q 036539 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTK 320 (749)
Q Consensus 241 Ivivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~ 320 (749)
|++++.|..|.. +++..+.||.++|+. +|+++|+++||+|+ |+|+......+. ......
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~~-------~~~~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPLQ--QPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQPP-------VVEVAP 59 (405)
T ss_pred CeEEeccCCccc--cCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCCC-------ccccCC
Confidence 678899998753 355566799999999 77778899999999 999764322111 111123
Q ss_pred ceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCC
Q 036539 321 HSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHAL 400 (749)
Q Consensus 321 ~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l 400 (749)
++.+.+++..+..+ .....+..++..|.....+.+......+||+||+|++.+++++.++++..++|+|+|.|++
T Consensus 60 ~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEG-----LDKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCccc-----CCHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 67888887654321 1111111222233333443444433458999999998888888888888999999999987
Q ss_pred cccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCc
Q 036539 401 EKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480 (749)
Q Consensus 401 ~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~k 480 (749)
...+ ..++..... .........+...++.+|.++++|....+... ...|.+ ..+
T Consensus 135 ~~~~----~~~~~~~~~-~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~-------------------~~~~~~--~~k 188 (405)
T TIGR03449 135 AAVK----NAALADGDT-PEPEARRIGEQQLVDNADRLIANTDEEARDLV-------------------RHYDAD--PDR 188 (405)
T ss_pred HHHH----HHhccCCCC-CchHHHHHHHHHHHHhcCeEEECCHHHHHHHH-------------------HHcCCC--hhh
Confidence 4211 001100000 00011122355678999999999987655211 112333 678
Q ss_pred eEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHcc
Q 036539 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRL 560 (749)
Q Consensus 481 i~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~ 560 (749)
+.+||||+|.+.|.+...... ++++++ ++++++|+|+||+.+.||++.|++|+.++.+.
T Consensus 189 i~vi~ngvd~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~ 247 (405)
T TIGR03449 189 IDVVAPGADLERFRPGDRATE-------------------RARLGL--PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDR 247 (405)
T ss_pred EEEECCCcCHHHcCCCcHHHH-------------------HHhcCC--CCCCcEEEEecCCCcccCHHHHHHHHHHHHhh
Confidence 999999999988876532221 134565 56788999999999999999999999999776
Q ss_pred CCC--eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCC
Q 036539 561 RNL--VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAF 638 (749)
Q Consensus 561 ~~~--v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~f 638 (749)
.++ ++|+|+|++.. +. ..+.+.++++++++++.++|+|+| .++.+++..+|+. +|++|+||..|+|
T Consensus 248 ~~~~~~~l~ivG~~~~-----~g--~~~~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~l~~-ad~~v~ps~~E~~ 315 (405)
T TIGR03449 248 DPDRNLRVIVVGGPSG-----SG--LATPDALIELAAELGIADRVRFLP----PRPPEELVHVYRA-ADVVAVPSYNESF 315 (405)
T ss_pred CCCcceEEEEEeCCCC-----Cc--chHHHHHHHHHHHcCCCceEEECC----CCCHHHHHHHHHh-CCEEEECCCCCCc
Confidence 666 99999997532 00 112567888899999999999999 7778999999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 036539 639 GLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKI 718 (749)
Q Consensus 639 GLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~ 718 (749)
|++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++.+ ++|||+.
T Consensus 316 g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l----~~~~~~~~~~~~~~~~~-~~fsw~~ 390 (405)
T TIGR03449 316 GLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLL----DDPRTRIRMGAAAVEHA-AGFSWAA 390 (405)
T ss_pred ChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HhCCHHH
Confidence 999999999999999999999999999999999999999999999996654 79999999999999987 7899999
Q ss_pred HHHHHHHHHHH
Q 036539 719 YANKMLNMGCM 729 (749)
Q Consensus 719 ~a~~ll~ly~~ 729 (749)
++++++++|..
T Consensus 391 ~~~~~~~~y~~ 401 (405)
T TIGR03449 391 TADGLLSSYRD 401 (405)
T ss_pred HHHHHHHHHHH
Confidence 99999999874
No 9
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.9e-42 Score=405.46 Aligned_cols=460 Identities=16% Similarity=0.187 Sum_probs=311.8
Q ss_pred HHHhhcCCCcchHHHhhh--cC--CceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCccc
Q 036539 216 LSEVLQAPDPLHMEKFLS--SL--PILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIK 291 (749)
Q Consensus 216 ~~~~~~~p~~~~~~~~~~--~~--pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~ 291 (749)
-.++.+.+|...+..|+. +- .+.|||++||....|- ..+||..-++- .|.++|+++||+|.
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~-------aKtGGLaDVv~--------sLPkAL~~~GhdV~ 519 (977)
T PLN02939 455 YLSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEMAPV-------AKVGGLADVVS--------GLGKALQKKGHLVE 519 (977)
T ss_pred HHHHhcCchHHHHHHHHHhccCCCCCCCEEEEEEcccccc-------cccccHHHHHH--------HHHHHHHHcCCeEE
Confidence 345667788777777764 22 2459999999988764 47999998888 66777899999999
Q ss_pred ceEEEEeCCCCCCCCCccC-Cc-----cc-cccC-----------ccceEEEEecCccCCccccccccccccccc---hH
Q 036539 292 PQIVVVTRLIPDARGTKCN-QE-----LE-PIEG-----------TKHSNILRVPFKTDKGILHRWVSRFDVYPY---LE 350 (749)
Q Consensus 292 ~~i~V~T~~~p~~~g~~~~-~~-----~e-~i~~-----------~~~~~I~rvp~~~~~~~~~~~isr~~i~py---l~ 350 (749)
|+++.++........ .. .. .+.+ .+|+.++.+...... .+..|..++.+ .+
T Consensus 520 ----VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~----~fF~R~~iYg~~Dn~~ 591 (977)
T PLN02939 520 ----IVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPS----KFFWRAQYYGEHDDFK 591 (977)
T ss_pred ----EEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCch----hccCCCCCCCCccHHH
Confidence 999987643200000 00 00 0101 012222222110000 01223333322 12
Q ss_pred H--HHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHH------cCCCcEEEEecCCcccc-cCCCc-----chhhhcC
Q 036539 351 G--FAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMAS------KLGITQATIAHALEKTK-YEDSD-----VKWKELD 416 (749)
Q Consensus 351 ~--f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~------~~gvp~v~t~H~l~~~k-~~~s~-----~~~~~~~ 416 (749)
+ |...++-++....+.+|||||||.|..++++.++.+ ..++++|+|+|++.... ++... +.+..+.
T Consensus 592 RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~ 671 (977)
T PLN02939 592 RFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLD 671 (977)
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHcc
Confidence 2 222333344444467999999999999987655443 23578999999985332 11111 1111110
Q ss_pred --ccc--ccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCC
Q 036539 417 --PKY--HFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSV 492 (749)
Q Consensus 417 --~~y--~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~ 492 (749)
... .+..++..-+.++..||.|+|+|+..+..+... + +..|.+. +.....|+.+|+||||.+.
T Consensus 672 ~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te---~----G~GL~~~------L~~~~~Kl~gIlNGID~e~ 738 (977)
T PLN02939 672 RPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSE---G----GRGLQDT------LKFHSKKFVGILNGIDTDT 738 (977)
T ss_pred ChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHH---h----ccchHHH------hccccCCceEEecceehhh
Confidence 000 011222223345667999999999888743321 1 1111111 1223679999999999999
Q ss_pred CCCCchHHhhhhccchhhHHhhccccchhhhcCccCC-CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEec
Q 036539 493 YFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLAD-RKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGA 571 (749)
Q Consensus 493 f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~-~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~ 571 (749)
|.|.++..-...--...++.+.-+....++++|+..+ ++.|+|+++||+.+.||++.|++|+..+.+ ++++|+|+|+
T Consensus 739 wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvGd 816 (977)
T PLN02939 739 WNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLGS 816 (977)
T ss_pred cCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEeC
Confidence 9987542100000001122233344556778898432 467999999999999999999999998864 4789999999
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCc
Q 036539 572 FFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP 651 (749)
Q Consensus 572 g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlP 651 (749)
|+.+ .+.+.+.++++++++.++|.|+| ..+......+|+ ++|+||+||.+|+||++++|||+||+|
T Consensus 817 Gp~~---------~~e~eL~~La~~l~l~drV~FlG----~~de~lah~IYA-aADIFLmPSr~EPfGLvqLEAMAyGtP 882 (977)
T PLN02939 817 SPVP---------HIQREFEGIADQFQSNNNIRLIL----KYDEALSHSIYA-ASDMFIIPSMFEPCGLTQMIAMRYGSV 882 (977)
T ss_pred CCcH---------HHHHHHHHHHHHcCCCCeEEEEe----ccCHHHHHHHHH-hCCEEEECCCccCCcHHHHHHHHCCCC
Confidence 9751 23467888999999999999999 566666778999 599999999999999999999999999
Q ss_pred EEEcCcccccccccc---------CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 036539 652 TFATNQGGPAEIIVD---------GVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANK 722 (749)
Q Consensus 652 VVat~~GG~~EiI~d---------g~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ 722 (749)
+|++++||+.|+|.+ +.+||+|++.|+++++++|.+++..+..||+.|++|+++++ .++|||+.++++
T Consensus 883 PVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~q 959 (977)
T PLN02939 883 PIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSASQ 959 (977)
T ss_pred EEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHHH
Confidence 999999999999875 57999999999999999999887766789999999998775 378999999999
Q ss_pred HHHHHHHh
Q 036539 723 MLNMGCMY 730 (749)
Q Consensus 723 ll~ly~~~ 730 (749)
|+++|+..
T Consensus 960 YeeLY~~l 967 (977)
T PLN02939 960 YEELYQRA 967 (977)
T ss_pred HHHHHHHH
Confidence 99998754
No 10
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=1.9e-42 Score=395.02 Aligned_cols=430 Identities=18% Similarity=0.223 Sum_probs=294.3
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCC-----cc
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQ-----EL 313 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~-----~~ 313 (749)
|||++||...+|- -.+||...++. .|+++|+++||+|. |+|+.++......... ..
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999998863 25899999999 67777899999999 9999876532110000 00
Q ss_pred c-cc-----------cCccceEEEEecCccCCccccccccc-ccccc--c---h---HHHHHHHHHHHHHHcCCCceEEE
Q 036539 314 E-PI-----------EGTKHSNILRVPFKTDKGILHRWVSR-FDVYP--Y---L---EGFAQDATTMILEFLGGKPDLII 372 (749)
Q Consensus 314 e-~i-----------~~~~~~~I~rvp~~~~~~~~~~~isr-~~i~p--y---l---~~f~~~~~~~l~~~l~~~pDIIh 372 (749)
. .+ ...+++.++++..... ..| ..++. + . ..|...+...+ ...+.+|||||
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~~-------~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~-~~~~~~~DiiH 133 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPSL-------FDRPGGIYGDDYPDNAERFAFFSRAAAELL-SGLGWQPDVVH 133 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHHH-------cCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-HhcCCCCCEEE
Confidence 0 00 0112455555543210 111 01221 1 1 22333343333 33467999999
Q ss_pred EcCCCchHHHHHHHHcCC---CcEEEEecCCcccc-cCCCcch-----hhhcC-cccccchhhhHHHHHhhhCCEEEeCC
Q 036539 373 GNYSDGNLVASVMASKLG---ITQATIAHALEKTK-YEDSDVK-----WKELD-PKYHFSCQFIADTIAMNATDFIIAST 442 (749)
Q Consensus 373 ~h~~~~~lva~lla~~~g---vp~v~t~H~l~~~k-~~~s~~~-----~~~~~-~~y~f~~~~~~e~~a~~~aD~IIt~S 442 (749)
+|+|.+++++.++++..+ +|+|+|+|++.... ++..... +..+. ..+.+...+...+.++..||.|+|+|
T Consensus 134 ~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS 213 (473)
T TIGR02095 134 AHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVS 213 (473)
T ss_pred ECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecC
Confidence 999999999998888776 99999999985322 1111110 01010 11111112334566889999999999
Q ss_pred HHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhh
Q 036539 443 FQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNE 522 (749)
Q Consensus 443 ~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 522 (749)
...++.+... .+ ++.+.+.. .....++.+|+||+|.+.|.|..+..-...--....+....+....++
T Consensus 214 ~~~~~ei~~~--~~----~~~l~~~l------~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~ 281 (473)
T TIGR02095 214 PTYAREILTP--EF----GYGLDGVL------KARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQE 281 (473)
T ss_pred HhHHHHhcCC--cC----CccchhHH------HhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHH
Confidence 8877643321 01 11111110 112568999999999999987543210000000000111112233456
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
++|+..++++++|+++||+.+.||++.|++|+.++.+. +++|+|+|+|.. .+.+.+++++.+++ .+
T Consensus 282 ~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~l~~~~~~~~--~~ 347 (473)
T TIGR02095 282 ELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDP----------ELEEALRELAERYP--GN 347 (473)
T ss_pred HcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCH----------HHHHHHHHHHHHCC--Cc
Confidence 78884445889999999999999999999999999753 599999999853 23456777777664 67
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------ceEEEECCC
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDG------VSGFHIDPY 676 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg------~~G~lv~p~ 676 (749)
+.+.+ ..+.+++..+++ ++|++|+||.+|+||++++|||+||+|||+|+.||+.|+|.++ .+|+++++.
T Consensus 348 v~~~~----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~ 422 (473)
T TIGR02095 348 VRVII----GYDEALAHLIYA-GADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEY 422 (473)
T ss_pred EEEEE----cCCHHHHHHHHH-hCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCC
Confidence 88887 566777888999 5999999999999999999999999999999999999999998 899999999
Q ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 677 NGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 677 d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
|+++++++|.+++....+|++.|++|+++++ .++|||+.++++|+++|+.
T Consensus 423 d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 423 DPGALLAALSRALRLYRQDPSLWEALQKNAM---SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh---ccCCCcHHHHHHHHHHHHh
Confidence 9999999998877555559999999999886 3689999999999999974
No 11
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=2.1e-41 Score=373.69 Aligned_cols=397 Identities=32% Similarity=0.517 Sum_probs=300.7
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+|++.|+.|.. -.|.|+.||.+.++. +|++.|+++||+|+ |+|...+..... . ....
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~~-----~--~~~~ 59 (398)
T cd03800 1 RIALISLHGSPLA--QPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALPP-----I--VELA 59 (398)
T ss_pred CeEEEeccccccc--cCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccCC-----c--cccc
Confidence 5889999987632 245689999999999 66777799999999 888654332111 0 1112
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecC
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHA 399 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~ 399 (749)
.++.+.+++..+.. ..++..+++++..|...+.+.+... ..+||+||+|++..+.++..+++..++|++++.|+
T Consensus 60 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAE-----YLPKEELWPYLDEFADDLLRFLRRE-GGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEeccccccc-----CCChhhcchhHHHHHHHHHHHHHhc-CCCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 35777777764321 1233445666666666666665543 23899999999888888888899999999999998
Q ss_pred CcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCC
Q 036539 400 LEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479 (749)
Q Consensus 400 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ 479 (749)
+...........|. +........++..++.+|.++++|.......... .+.+ ..
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~~~~--~~ 187 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSL-------------------YGAY--PR 187 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH-------------------cccc--cc
Confidence 75433221111111 1122233456678899999999998765521111 1111 45
Q ss_pred ceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHc
Q 036539 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKR 559 (749)
Q Consensus 480 ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~ 559 (749)
++.+||||+|.+.|.+....... ++.++. +.++++|+|+||+++.||++.+++++..+.+
T Consensus 188 ~~~vi~ng~~~~~~~~~~~~~~~------------------~~~~~~--~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~ 247 (398)
T cd03800 188 RIRVVPPGVDLERFTPYGRAEAR------------------RARLLR--DPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247 (398)
T ss_pred ccEEECCCCCccceecccchhhH------------------HHhhcc--CCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence 68999999999888665432211 112333 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCc
Q 036539 560 LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFG 639 (749)
Q Consensus 560 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fG 639 (749)
..++++|+++|++..... ..+...++++++++++.++|.|+| .++.+++..+++. +|++++||..|+||
T Consensus 248 ~~~~~~l~i~G~~~~~~~------~~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adi~l~ps~~e~~~ 316 (398)
T cd03800 248 LRERANLVIVGGPRDDIL------AMDEEELRELARELGVIDRVDFPG----RVSREDLPALYRA-ADVFVNPALYEPFG 316 (398)
T ss_pred hCCCeEEEEEECCCCcch------hhhhHHHHHHHHhcCCCceEEEec----cCCHHHHHHHHHh-CCEEEecccccccC
Confidence 788999999999876211 112344777888899999999999 7788999999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 036539 640 LTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719 (749)
Q Consensus 640 LtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 719 (749)
++++|||+||+|||+++.||..|++.++.+|++++++|+++++++|.++ .+|++.+++|++++++++.++|||+.+
T Consensus 317 ~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l----~~~~~~~~~~~~~a~~~~~~~~s~~~~ 392 (398)
T cd03800 317 LTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRL----LTDPALRRRLSRAGLRRARARYTWERV 392 (398)
T ss_pred cHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHH----HhCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999999999999999999999999999999999654 479999999999999999999999999
Q ss_pred HHHHH
Q 036539 720 ANKML 724 (749)
Q Consensus 720 a~~ll 724 (749)
+++++
T Consensus 393 ~~~~~ 397 (398)
T cd03800 393 AARLL 397 (398)
T ss_pred HHHHh
Confidence 99986
No 12
>PLN02316 synthase/transferase
Probab=100.00 E-value=1.4e-41 Score=404.98 Aligned_cols=407 Identities=16% Similarity=0.119 Sum_probs=281.4
Q ss_pred ceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCcc-CCcc-c
Q 036539 237 ILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKC-NQEL-E 314 (749)
Q Consensus 237 m~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~-~~~~-e 314 (749)
.+|||++||.+..|- ..+||...+|. .|+++|+++||+|. |+|+.++....... .... .
T Consensus 586 ~pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~ 646 (1036)
T PLN02316 586 PPMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQR 646 (1036)
T ss_pred CCcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEE
Confidence 359999999999864 35899999999 67777899999999 99998764210000 0000 0
Q ss_pred cc--cC---------ccceEEEEecCccCCccccccccccccccc---hH---HHHHHHHHHHHHHcCCCceEEEEcCCC
Q 036539 315 PI--EG---------TKHSNILRVPFKTDKGILHRWVSRFDVYPY---LE---GFAQDATTMILEFLGGKPDLIIGNYSD 377 (749)
Q Consensus 315 ~i--~~---------~~~~~I~rvp~~~~~~~~~~~isr~~i~py---l~---~f~~~~~~~l~~~l~~~pDIIh~h~~~ 377 (749)
.+ .+ .+++.++.+.... + +..+..++.| .. .|...++ ++......+|||||+|+|.
T Consensus 647 ~~~~~~~~~~v~~~~~~GV~vyfl~~~~--~----~F~r~~~Yg~~Dd~~RF~~F~~Aal-e~l~~~~~~PDIIHaHDW~ 719 (1036)
T PLN02316 647 SYSWGGTEIKVWFGKVEGLSVYFLEPQN--G----MFWAGCVYGCRNDGERFGFFCHAAL-EFLLQSGFHPDIIHCHDWS 719 (1036)
T ss_pred EeccCCEEEEEEEEEECCcEEEEEeccc--c----ccCCCCCCCchhHHHHHHHHHHHHH-HHHHhcCCCCCEEEECCCh
Confidence 00 00 1133444333110 1 1122222221 12 2333333 3333446699999999999
Q ss_pred chHHHHHHHHc------CCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCC
Q 036539 378 GNLVASVMASK------LGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKD 451 (749)
Q Consensus 378 ~~lva~lla~~------~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~ 451 (749)
+++++.++++. .++|+|+|+|++.... . .-..++..||.|+|+|...+..+..
T Consensus 720 talva~llk~~~~~~~~~~~p~V~TiHnl~~~~---------------n------~lk~~l~~AD~ViTVS~tya~EI~~ 778 (1036)
T PLN02316 720 SAPVAWLFKDHYAHYGLSKARVVFTIHNLEFGA---------------N------HIGKAMAYADKATTVSPTYSREVSG 778 (1036)
T ss_pred HHHHHHHHHHhhhhhccCCCCEEEEeCCcccch---------------h------HHHHHHHHCCEEEeCCHHHHHHHHh
Confidence 99998888764 3589999999863210 0 0124678999999999987663221
Q ss_pred CCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhcc-chhhHHhhccccchhhhcCccCCC
Q 036539 452 RPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKF-HPEIEELLYNKEDNNEHIGYLADR 530 (749)
Q Consensus 452 ~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~-~~~~~~~l~~~~~~~~~~g~l~~~ 530 (749)
. .++.....|+.+|+||||.+.|.|.++.......- ...++.+.......++.+|+. +.
T Consensus 779 ~-------------------~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~-~~ 838 (1036)
T PLN02316 779 N-------------------SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLK-QA 838 (1036)
T ss_pred c-------------------cCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCC-cc
Confidence 1 01222246999999999999998764321000000 000000111222345678883 24
Q ss_pred CCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCC--CCcEEEecC
Q 036539 531 KKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL--KGQMRWIAA 608 (749)
Q Consensus 531 ~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L--~~~V~flG~ 608 (749)
+.|+|+++|||.++||++.|++|+.++.+ .+++|+|+|+|+++ .+.+.+.+++.++++ +++|.|.|
T Consensus 839 d~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd~---------~~e~~l~~La~~Lg~~~~~rV~f~g- 906 (1036)
T PLN02316 839 DLPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQVVLLGSAPDP---------RIQNDFVNLANQLHSSHHDRARLCL- 906 (1036)
T ss_pred cCeEEEEEeccccccCHHHHHHHHHHHhh--cCcEEEEEeCCCCH---------HHHHHHHHHHHHhCccCCCeEEEEe-
Confidence 68999999999999999999999999865 36999999999751 235678888998865 57899988
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC-------------ceEEEECC
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDG-------------VSGFHIDP 675 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg-------------~~G~lv~p 675 (749)
..+......+|+ ++|+||+||++|+||++++|||+||+|+|++++||++|+|.++ .+||+|++
T Consensus 907 ---~~de~lah~iya-aADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~ 982 (1036)
T PLN02316 907 ---TYDEPLSHLIYA-GADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDG 982 (1036)
T ss_pred ---cCCHHHHHHHHH-hCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCC
Confidence 333333347888 5999999999999999999999999999999999999999884 68999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 676 YNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 676 ~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
.|+++++.+|.+++... ++....+++.+++.+.++|||+.++++|+++|+.
T Consensus 983 ~d~~aLa~AL~raL~~~---~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 983 ADAAGVDYALNRAISAW---YDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred CCHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 99999999998776422 3344556777777777899999999999999975
No 13
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=1.5e-41 Score=388.00 Aligned_cols=440 Identities=17% Similarity=0.171 Sum_probs=295.8
Q ss_pred CceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCc--cCC--
Q 036539 236 PILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTK--CNQ-- 311 (749)
Q Consensus 236 pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~--~~~-- 311 (749)
|| |||+++|....|- -.|||..-++- .|.++|+++||+|. |+++.+..-.... ...
T Consensus 4 ~~-~~il~v~~E~~p~-------~k~Ggl~dv~~--------~Lp~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSPF-------VRVSALADFMA--------SFPQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchhh-------cccchHHHHHH--------HHHHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 66 9999999988864 57999887777 66667899999999 9999875532110 000
Q ss_pred ccccc--cCccceEEEEec--CccCCc----cc--ccccccccccc-------c---hHHHH--HHHHHHHHHHcCCCce
Q 036539 312 ELEPI--EGTKHSNILRVP--FKTDKG----IL--HRWVSRFDVYP-------Y---LEGFA--QDATTMILEFLGGKPD 369 (749)
Q Consensus 312 ~~e~i--~~~~~~~I~rvp--~~~~~~----~~--~~~isr~~i~p-------y---l~~f~--~~~~~~l~~~l~~~pD 369 (749)
....+ .-.....+.++- ..+..+ ++ ..+..|..++. | .++|+ ..+..++......+||
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pD 143 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPD 143 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 00000 000011122110 000000 01 01122333321 1 12222 2223233344456899
Q ss_pred EEEEcCCCchHHHHHHHHcC-------CCcEEEEecCCcccccCCCc-----chhhhcCcccccchhhhHHHHHhhhCCE
Q 036539 370 LIIGNYSDGNLVASVMASKL-------GITQATIAHALEKTKYEDSD-----VKWKELDPKYHFSCQFIADTIAMNATDF 437 (749)
Q Consensus 370 IIh~h~~~~~lva~lla~~~-------gvp~v~t~H~l~~~k~~~s~-----~~~~~~~~~y~f~~~~~~e~~a~~~aD~ 437 (749)
|||+|+|.+++++.+++++. ++|+|+|+|++......... ..+........+...+...+.++..||.
T Consensus 144 iiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad~ 223 (489)
T PRK14098 144 IIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHADL 223 (489)
T ss_pred EEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcCc
Confidence 99999999999998887654 79999999997532211000 0001000000111123345668899999
Q ss_pred EEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccc
Q 036539 438 IIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNK 517 (749)
Q Consensus 438 IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~ 517 (749)
|+|+|+..++.+.... . .++.+++..+ ....|+.+|+||||.+.|.|.++..-+..--...++.+.-++
T Consensus 224 VitVS~~~a~ei~~~~-~----~~~gl~~~l~------~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k 292 (489)
T PRK14098 224 LTTTSPRYAEEIAGDG-E----EAFGLDKVLE------ERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENK 292 (489)
T ss_pred ceeeCHHHHHHhCcCC-C----CCcChHHHHH------hcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHH
Confidence 9999998887543310 0 1112221111 115689999999999999886542111000001111122223
Q ss_pred cchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHc
Q 036539 518 EDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKY 597 (749)
Q Consensus 518 ~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~ 597 (749)
...++.+|+..++++++|+++||+++.||++.|++|+.++.+ ++++|+|+|+|+. .+.+.++++++++
T Consensus 293 ~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~~ 360 (489)
T PRK14098 293 KALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQLVICGSGDK----------EYEKRFQDFAEEH 360 (489)
T ss_pred HHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCH----------HHHHHHHHHHHHC
Confidence 344567888666788999999999999999999999999875 3799999999864 2456788888887
Q ss_pred CCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc----CceEEEE
Q 036539 598 QLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD----GVSGFHI 673 (749)
Q Consensus 598 ~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d----g~~G~lv 673 (749)
+++|.|+| .++.+++..+|+ ++|+||+||.+|+||++.+|||+||+|+|+++.||..|++.+ +.+|+++
T Consensus 361 --~~~V~~~g----~~~~~~~~~~~a-~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~ 433 (489)
T PRK14098 361 --PEQVSVQT----EFTDAFFHLAIA-GLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIF 433 (489)
T ss_pred --CCCEEEEE----ecCHHHHHHHHH-hCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEe
Confidence 47899999 677888899999 599999999999999999999999999999999999998864 6799999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 674 DPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 674 ~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
++.|+++++++|.++++ +..|++.|++++++++ .++|||+.++++|+++|+.
T Consensus 434 ~~~d~~~la~ai~~~l~-~~~~~~~~~~~~~~~~---~~~fsw~~~a~~y~~lY~~ 485 (489)
T PRK14098 434 HDYTPEALVAKLGEALA-LYHDEERWEELVLEAM---ERDFSWKNSAEEYAQLYRE 485 (489)
T ss_pred CCCCHHHHHHHHHHHHH-HHcCHHHHHHHHHHHh---cCCCChHHHHHHHHHHHHH
Confidence 99999999999988763 5578999999988764 4789999999999999974
No 14
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=3.4e-41 Score=377.50 Aligned_cols=396 Identities=13% Similarity=0.087 Sum_probs=284.8
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCC--CCCC-CCccCCcccc
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLI--PDAR-GTKCNQELEP 315 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~--p~~~-g~~~~~~~e~ 315 (749)
|||+++|.+++| +.||.+.++. +|+++|.++||+|+ |+|+.. |... ...+......
T Consensus 1 mkIlii~~~~~P---------~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYAP---------ELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCCC---------CccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 799999988764 5689999998 77777899999999 999752 2210 0000100001
Q ss_pred ccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHcCCCcE
Q 036539 316 IEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG--NLVASVMASKLGITQ 393 (749)
Q Consensus 316 i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~--~lva~lla~~~gvp~ 393 (749)
.....+++++|+|...... ...+. .+.. ...|.......+.+....+||+||+|.+.. ...+.+++++.++|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLH-LGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHH-HHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1112468899988643210 00000 1111 122333444444443346899999998654 456777888899999
Q ss_pred EEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhcc
Q 036539 394 ATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKG 473 (749)
Q Consensus 394 v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~G 473 (749)
++++|+....... .................++.+++.+|.||++|....+.. ...|
T Consensus 135 v~~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~--------------------~~~~ 190 (412)
T PRK10307 135 WLHIQDYEVDAAF----GLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKA--------------------REKG 190 (412)
T ss_pred EEEeccCCHHHHH----HhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHH--------------------HHcC
Confidence 9999976421110 000000000000011246678899999999998877621 1224
Q ss_pred CCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHH
Q 036539 474 IDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEW 553 (749)
Q Consensus 474 i~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA 553 (749)
++ ..++.+||||+|.+.|.|....... ..++.+|+ ++++++|+|+||+.+.||++.|++|
T Consensus 191 ~~--~~~i~vi~ngvd~~~~~~~~~~~~~----------------~~~~~~~~--~~~~~~i~~~G~l~~~kg~~~li~a 250 (412)
T PRK10307 191 VA--AEKVIFFPNWSEVARFQPVADADVD----------------ALRAQLGL--PDGKKIVLYSGNIGEKQGLELVIDA 250 (412)
T ss_pred CC--cccEEEECCCcCHhhcCCCCccchH----------------HHHHHcCC--CCCCEEEEEcCccccccCHHHHHHH
Confidence 44 6789999999999888764321100 01234565 5677899999999999999999999
Q ss_pred HHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECC
Q 036539 554 YGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPA 633 (749)
Q Consensus 554 ~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS 633 (749)
+.++.+ .++++|+|+|+|+. .+.++++++++++. +|+|+| .++.+++..+++. +|++|+||
T Consensus 251 ~~~l~~-~~~~~l~ivG~g~~------------~~~l~~~~~~~~l~-~v~f~G----~~~~~~~~~~~~~-aDi~v~ps 311 (412)
T PRK10307 251 ARRLRD-RPDLIFVICGQGGG------------KARLEKMAQCRGLP-NVHFLP----LQPYDRLPALLKM-ADCHLLPQ 311 (412)
T ss_pred HHHhcc-CCCeEEEEECCChh------------HHHHHHHHHHcCCC-ceEEeC----CCCHHHHHHHHHh-cCEeEEee
Confidence 998854 57899999999976 67788899999986 799999 7778999999995 99999999
Q ss_pred CCCC----CcHHHHHHHHcCCcEEEcCccc--cccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 036539 634 LYEA----FGLTVIEAMNCGLPTFATNQGG--PAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGL 707 (749)
Q Consensus 634 ~~E~----fGLtvlEAMa~GlPVVat~~GG--~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~ 707 (749)
..|+ +|.+++|||+||+|||+|+.|| ..|++. .+|++++++|++++|++|.+ +.+|++.+++|+++|+
T Consensus 312 ~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~----l~~~~~~~~~~~~~a~ 385 (412)
T PRK10307 312 KAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAA----LARQALLRPKLGTVAR 385 (412)
T ss_pred ccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHH
Confidence 9998 5778999999999999999887 458886 59999999999999999965 4589999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHH
Q 036539 708 KRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 708 ~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
++++++|||+.++++|+++|+.
T Consensus 386 ~~~~~~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 386 EYAERTLDKENVLRQFIADIRG 407 (412)
T ss_pred HHHHHHcCHHHHHHHHHHHHHH
Confidence 9999999999999999999874
No 15
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=9.5e-41 Score=372.47 Aligned_cols=366 Identities=17% Similarity=0.197 Sum_probs=272.5
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+++++.++| ..||.+.++. +|++.|+++||+|+ |+|+..+...+. + ...
T Consensus 1 kI~~v~~~~~p---------~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~------~--~~~ 51 (398)
T cd03796 1 RICMVSDFFYP---------NLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVGI------R--YLT 51 (398)
T ss_pred CeeEEeecccc---------ccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCCc------c--ccc
Confidence 69999977764 5699999999 77777899999999 999764332111 0 112
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHcCCCcEEEEe
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGN--LVASVMASKLGITQATIA 397 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~--lva~lla~~~gvp~v~t~ 397 (749)
.++.+.++|...... .........+...+.+.+. +.+|||||+|.+.+. ..+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~--------~~~~~~~~~~~~~l~~~~~---~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN--------QSTLPTFFGTFPLLRNILI---RERITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC--------CccccchhhhHHHHHHHHH---hcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 356788887643210 0011111112222222222 348999999987653 346677888999999999
Q ss_pred cCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCC
Q 036539 398 HALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVL 477 (749)
Q Consensus 398 H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~ 477 (749)
|+.... .+.. ... . .......++.+|.+|++|....+. .....+++
T Consensus 121 h~~~~~----~~~~-~~~---~-----~~~~~~~~~~~d~ii~~s~~~~~~-------------------~~~~~~~~-- 166 (398)
T cd03796 121 HSLFGF----ADAS-SIH---T-----NKLLRFSLADVDHVICVSHTSKEN-------------------TVLRASLD-- 166 (398)
T ss_pred cccccc----cchh-hHH---h-----hHHHHHhhccCCEEEEecHhHhhH-------------------HHHHhCCC--
Confidence 986311 1100 000 0 011234578899999999865441 01112343
Q ss_pred CCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHh
Q 036539 478 DPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKN 557 (749)
Q Consensus 478 ~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l 557 (749)
..++.+||||+|.+.|.|.... .++++++|+++||+.+.||++.|++|+.++
T Consensus 167 ~~k~~vi~ngvd~~~f~~~~~~----------------------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 167 PERVSVIPNAVDSSDFTPDPSK----------------------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred hhhEEEEcCccCHHHcCCCccc----------------------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 5689999999999877654321 035678999999999999999999999999
Q ss_pred HccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCC
Q 036539 558 KRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEA 637 (749)
Q Consensus 558 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~ 637 (749)
.+..++++|+|+|+|+. .+.+.++++++++.++|.|+| .++.+++..+++. +|++|+||..|+
T Consensus 219 ~~~~~~~~l~i~G~g~~------------~~~l~~~~~~~~l~~~v~~~G----~~~~~~~~~~l~~-ad~~v~pS~~E~ 281 (398)
T cd03796 219 CKKHPNVRFIIGGDGPK------------RILLEEMREKYNLQDRVELLG----AVPHERVRDVLVQ-GHIFLNTSLTEA 281 (398)
T ss_pred HhhCCCEEEEEEeCCch------------HHHHHHHHHHhCCCCeEEEeC----CCCHHHHHHHHHh-CCEEEeCChhhc
Confidence 88788999999999876 567889999999999999999 7778999999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWK 717 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 717 (749)
||++++|||+||+|||+|+.||..|++.++. ++++ +.|+++++++|.+++ +++.....+++++++++.++|||+
T Consensus 282 ~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~-~~~~~~l~~~l~~~l----~~~~~~~~~~~~~~~~~~~~fs~~ 355 (398)
T cd03796 282 FCIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLA-EPDVESIVRKLEEAI----SILRTGKHDPWSFHNRVKKMYSWE 355 (398)
T ss_pred cCHHHHHHHHcCCCEEECCCCCchhheeCCc-eeec-CCCHHHHHHHHHHHH----hChhhhhhHHHHHHHHHHhhCCHH
Confidence 9999999999999999999999999998764 4444 448999999997655 566666678899999999999999
Q ss_pred HHHHHHHHHHHHh
Q 036539 718 IYANKMLNMGCMY 730 (749)
Q Consensus 718 ~~a~~ll~ly~~~ 730 (749)
.++++++++|+..
T Consensus 356 ~~~~~~~~~y~~l 368 (398)
T cd03796 356 DVAKRTEKVYDRI 368 (398)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999754
No 16
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=1.6e-40 Score=378.97 Aligned_cols=432 Identities=19% Similarity=0.170 Sum_probs=293.6
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCC--ccc---
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQ--ELE--- 314 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~--~~e--- 314 (749)
||++||+..+|- ..+||...++. .|+++|+++||+|. |+|+.++......... ...
T Consensus 1 ~Il~v~~E~~p~-------~k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~~~~~~~~~~~~~ 61 (476)
T cd03791 1 KVLFVASEVAPF-------AKTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDELRGQLLVLRLFG 61 (476)
T ss_pred CEEEEEcccccc-------ccCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhHhccCeEEEEEEe
Confidence 699999987763 36899999999 66777799999999 9998876532110000 000
Q ss_pred ------------cccCccceEEEEecCccCCccccccc--cccccccc-h---HHHHHHHHHHHHHHcCCCceEEEEcCC
Q 036539 315 ------------PIEGTKHSNILRVPFKTDKGILHRWV--SRFDVYPY-L---EGFAQDATTMILEFLGGKPDLIIGNYS 376 (749)
Q Consensus 315 ------------~i~~~~~~~I~rvp~~~~~~~~~~~i--sr~~i~py-l---~~f~~~~~~~l~~~l~~~pDIIh~h~~ 376 (749)
......++.+++++...... +..+ +....|.. . ..|...+...+ ..+..+|||||+|.|
T Consensus 62 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l-~~~~~~pDviH~hd~ 138 (476)
T cd03791 62 VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFD--RPGLYDDSGYDYEDNAERFALFSRAALELL-RRLGWKPDIIHCHDW 138 (476)
T ss_pred eccCCceeEEEEEEEEeCCceEEEEcChHHcC--CCCCCCccCCCCccHHHHHHHHHHHHHHHH-HhcCCCCcEEEECch
Confidence 00011245566554322110 0000 00111111 1 12333344333 333679999999999
Q ss_pred CchHHHHHHHHc------CCCcEEEEecCCcccccCCCc------chh--hhcCcccccchhhhHHHHHhhhCCEEEeCC
Q 036539 377 DGNLVASVMASK------LGITQATIAHALEKTKYEDSD------VKW--KELDPKYHFSCQFIADTIAMNATDFIIAST 442 (749)
Q Consensus 377 ~~~lva~lla~~------~gvp~v~t~H~l~~~k~~~s~------~~~--~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S 442 (749)
.+++++.++++. .++|+|+|+|++......... ..| ......+.+...+..++.++..||.|+++|
T Consensus 139 ~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS 218 (476)
T cd03791 139 HTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVS 218 (476)
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecC
Confidence 998888888776 389999999998543211000 001 000111223334556778899999999999
Q ss_pred HHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhh
Q 036539 443 FQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNE 522 (749)
Q Consensus 443 ~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 522 (749)
...++.+....+ ++.+..+ +.....|+.+|+||+|.+.|.|.........-.....+....+....++
T Consensus 219 ~~~~~~i~~~~~------~~gl~~~------~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~ 286 (476)
T cd03791 219 PTYAREILTPEF------GEGLDGL------LRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQE 286 (476)
T ss_pred HhHHHHhCCCCC------CcchHHH------HHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHH
Confidence 887764332210 0000000 1112579999999999999987654321100000011112223334456
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
++|+..++++++|+|+||+.+.||++.|++++.++.+. +++|+|+|+|.. ...+.+.++++++ .++
T Consensus 287 ~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~~~~~~~~~--~~~ 352 (476)
T cd03791 287 ELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDP----------EYEEALRELAARY--PGR 352 (476)
T ss_pred HcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCH----------HHHHHHHHHHHhC--CCc
Confidence 78875457899999999999999999999999998764 499999999854 2345677777765 567
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCc------eEEEECCC
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGV------SGFHIDPY 676 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~------~G~lv~p~ 676 (749)
+.+++ ..+.+++..+++ ++|++++||.+|+||++++|||+||+|||+|+.||+.|+|.++. +|+++++.
T Consensus 353 v~~~~----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~ 427 (476)
T cd03791 353 VAVLI----GYDEALAHLIYA-GADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGY 427 (476)
T ss_pred EEEEE----eCCHHHHHHHHH-hCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCC
Confidence 88776 455666778888 59999999999999999999999999999999999999999988 99999999
Q ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 677 NGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 677 d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
|+++++++|.++++ +..+++.|.++++++++ +.|||+.++++|+++|+
T Consensus 428 ~~~~l~~~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 428 NADALLAALRRALA-LYRDPEAWRKLQRNAMA---QDFSWDRSAKEYLELYR 475 (476)
T ss_pred CHHHHHHHHHHHHH-HHcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHh
Confidence 99999999988763 44679999999988865 57999999999999986
No 17
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=4e-40 Score=375.81 Aligned_cols=437 Identities=17% Similarity=0.177 Sum_probs=284.1
Q ss_pred eeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCc--ccc
Q 036539 238 LFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQE--LEP 315 (749)
Q Consensus 238 ~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~--~e~ 315 (749)
.|||++||....|- -.|||..-++- .|.++|+++||+|. |+++.+..-... .... ...
T Consensus 3 ~~~il~v~~E~~p~-------~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~-~~~~~~~~~ 62 (485)
T PRK14099 3 PLRVLSVASEIFPL-------IKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAG-IEDAEQVHS 62 (485)
T ss_pred CcEEEEEEeccccc-------cCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhh-hcCceEEEE
Confidence 48999999888764 47999887777 66777899999999 999987543110 1100 000
Q ss_pred ccC--ccceEEEEecCccCCc-cc--cccccccc-cc------c---chHHH--HHHHHHHHHHHc--CCCceEEEEcCC
Q 036539 316 IEG--TKHSNILRVPFKTDKG-IL--HRWVSRFD-VY------P---YLEGF--AQDATTMILEFL--GGKPDLIIGNYS 376 (749)
Q Consensus 316 i~~--~~~~~I~rvp~~~~~~-~~--~~~isr~~-i~------p---yl~~f--~~~~~~~l~~~l--~~~pDIIh~h~~ 376 (749)
+.. ...+++.......-.- ++ ..+..|.. ++ + ..++| ...++-++...+ +.+|||||+|.|
T Consensus 63 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw 142 (485)
T PRK14099 63 FPDLFGGPARLLAARAGGLDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDW 142 (485)
T ss_pred EeeeCCceEEEEEEEeCCceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCc
Confidence 100 0011121111000000 00 01112221 11 1 11232 223333444332 468999999999
Q ss_pred CchHHHHHHHH--cCCCcEEEEecCCcccc-cCCC-----cchhhhcC-cccccchhhhHHHHHhhhCCEEEeCCHHHHh
Q 036539 377 DGNLVASVMAS--KLGITQATIAHALEKTK-YEDS-----DVKWKELD-PKYHFSCQFIADTIAMNATDFIIASTFQEIA 447 (749)
Q Consensus 377 ~~~lva~lla~--~~gvp~v~t~H~l~~~k-~~~s-----~~~~~~~~-~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~ 447 (749)
.+++++.++.. ..++|.|+|+|++.... ++.. ...+..+. ....+.......+.++..||.|+|+|...++
T Consensus 143 ~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ 222 (485)
T PRK14099 143 QAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYAL 222 (485)
T ss_pred HHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHH
Confidence 99888877764 34689999999985322 1100 01111110 0011111112345678999999999988776
Q ss_pred hcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCcc
Q 036539 448 GSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYL 527 (749)
Q Consensus 448 ~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l 527 (749)
...+.. .++.+.+.+ .....|+.+|+||||.+.|.|.++.......-...++.+..+....++++|+.
T Consensus 223 ei~~~~------~g~gl~~~l------~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~ 290 (485)
T PRK14099 223 EIQGPE------AGMGLDGLL------RQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLD 290 (485)
T ss_pred HHhccc------CCcChHHHH------HhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCC
Confidence 432210 001111100 11256899999999999998865421000000000111111223345678884
Q ss_pred CCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcE-EEe
Q 036539 528 ADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM-RWI 606 (749)
Q Consensus 528 ~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V-~fl 606 (749)
.+++.++|+++||+.++||++.|++|+.++.+ .+++|+|+|+|.. ...+.+++++++++ +++ .|+
T Consensus 291 ~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~~~--~~v~~~~ 356 (485)
T PRK14099 291 PDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQLALLGSGDA----------ELEARFRAAAQAYP--GQIGVVI 356 (485)
T ss_pred cccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEEEEEecCCH----------HHHHHHHHHHHHCC--CCEEEEe
Confidence 44568899999999999999999999999875 3689999999864 23466777787764 455 788
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------ceEEEECCCC
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDG---------VSGFHIDPYN 677 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg---------~~G~lv~p~d 677 (749)
|+ .+++..+|..++|+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++|.|
T Consensus 357 G~------~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d 430 (485)
T PRK14099 357 GY------DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVT 430 (485)
T ss_pred CC------CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCC
Confidence 84 45888887435999999999999999999999999999999999999999875 6899999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 678 GDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 678 ~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
+++++++|.+++ .+.+|++.|++|+++++ .++|||+.++++|+++|+..
T Consensus 431 ~~~La~ai~~a~-~l~~d~~~~~~l~~~~~---~~~fSw~~~a~~y~~lY~~l 479 (485)
T PRK14099 431 ADALAAALRKTA-ALFADPVAWRRLQRNGM---TTDVSWRNPAQHYAALYRSL 479 (485)
T ss_pred HHHHHHHHHHHH-HHhcCHHHHHHHHHHhh---hhcCChHHHHHHHHHHHHHH
Confidence 999999998754 35589999999999986 37899999999999998754
No 18
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=1.9e-39 Score=363.34 Aligned_cols=281 Identities=18% Similarity=0.229 Sum_probs=231.1
Q ss_pred CCCceEEEEcCCCchHHHHHHHH--cCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCC
Q 036539 365 GGKPDLIIGNYSDGNLVASVMAS--KLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIAST 442 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lva~lla~--~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S 442 (749)
+.+||+||+|++..+..+..+++ ..+.+.++|.|+..... ......+. ......++++|+|+++|
T Consensus 116 ~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~--------~~~~~~~~-----~~~~~~~~~ad~vv~~S 182 (406)
T PRK15427 116 PFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISS--------REVLNHYT-----PEYQQLFRRGDLMLPIS 182 (406)
T ss_pred cCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEccccccc--------chhhhhhh-----HHHHHHHHhCCEEEECC
Confidence 45899999999887777777665 44557788999753211 00001111 11233678999999999
Q ss_pred HHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhh
Q 036539 443 FQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNE 522 (749)
Q Consensus 443 ~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 522 (749)
....+.. ...|++ ..|+.+||||+|.+.|.+.....
T Consensus 183 ~~~~~~l--------------------~~~g~~--~~ki~vi~nGvd~~~f~~~~~~~---------------------- 218 (406)
T PRK15427 183 DLWAGRL--------------------QKMGCP--PEKIAVSRMGVDMTRFSPRPVKA---------------------- 218 (406)
T ss_pred HHHHHHH--------------------HHcCCC--HHHEEEcCCCCCHHHcCCCcccc----------------------
Confidence 8766511 112444 67899999999998886532110
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
+.++..|+|+||+.+.||++.+++|++.+.+..++++|+|+|+|+. .++++++++++++.++
T Consensus 219 ------~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~------------~~~l~~~~~~~~l~~~ 280 (406)
T PRK15427 219 ------PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW------------ERRLRTLIEQYQLEDV 280 (406)
T ss_pred ------CCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 2345679999999999999999999999988778999999999976 6789999999999999
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCC
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALY------EAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPY 676 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~------E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~ 676 (749)
|.|+| .++.+++..+|+. +|++|+||.. ||||++++|||+||+|||+|+.||..|+|.++.+|++++++
T Consensus 281 V~~~G----~~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~ 355 (406)
T PRK15427 281 VEMPG----FKPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEN 355 (406)
T ss_pred EEEeC----CCCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCC
Confidence 99999 7788999999995 9999999974 99999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 677 NGDESSDKIADFFEACKV-DPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 677 d~e~lA~aI~~~l~~l~~-dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
|++++|++|.++ .+ ||+.+++|+++|++++.++|||+.+++++.++|+.
T Consensus 356 d~~~la~ai~~l----~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 356 DAQALAQRLAAF----SQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred CHHHHHHHHHHH----HhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999999654 47 99999999999999999999999999999999864
No 19
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=8.1e-39 Score=350.55 Aligned_cols=366 Identities=19% Similarity=0.264 Sum_probs=266.1
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
|||++++. |..||.+.++. +|++.|+++||+|+ |+|...+... . ..
T Consensus 1 mki~~~~~------------p~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~~~-------~---~~ 46 (371)
T cd04962 1 MKIGIVCY------------PTYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPFRL-------D---EY 46 (371)
T ss_pred CceeEEEE------------eCCCCccchHH--------HHHHHHHhcCCceE----EEecCCCcch-------h---hh
Confidence 68999962 34599999999 77777899999999 8886532210 0 01
Q ss_pred ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHc----CCCcEE
Q 036539 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASK----LGITQA 394 (749)
Q Consensus 319 ~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~----~gvp~v 394 (749)
..+..+..++.... +......+.......+.+.+. +.+||+||+|++.+...+.+++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~i~---~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQY--------PLFQYPPYDLALASKIAEVAK---RYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEeccccc--------chhhcchhHHHHHHHHHHHHh---cCCccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 11233333322111 001111111122222333332 348999999987654444333322 389999
Q ss_pred EEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccC
Q 036539 395 TIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGI 474 (749)
Q Consensus 395 ~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi 474 (749)
++.|+...... .....+. ...+..++.+|.|+++|....+...+. +
T Consensus 116 ~~~h~~~~~~~--------~~~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~--------------------~- 161 (371)
T cd04962 116 TTLHGTDITLV--------GQDPSFQ-----PATRFSIEKSDGVTAVSESLRQETYEL--------------------F- 161 (371)
T ss_pred EEEcCCccccc--------cccccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHh--------------------c-
Confidence 99997532110 0011111 123557889999999998766521110 1
Q ss_pred CCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHH
Q 036539 475 DVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWY 554 (749)
Q Consensus 475 ~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~ 554 (749)
....++.+||||+|...|.+...... ++.++. ++++++++++||+.+.||++.+++++
T Consensus 162 -~~~~~i~vi~n~~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~il~~g~l~~~K~~~~li~a~ 219 (371)
T cd04962 162 -DITKEIEVIPNFVDEDRFRPKPDEAL-------------------KRRLGA--PEGEKVLIHISNFRPVKRIDDVIRIF 219 (371)
T ss_pred -CCcCCEEEecCCcCHhhcCCCchHHH-------------------HHhcCC--CCCCeEEEEecccccccCHHHHHHHH
Confidence 12568999999999887765433221 123454 56778999999999999999999999
Q ss_pred HHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC
Q 036539 555 GKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL 634 (749)
Q Consensus 555 ~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~ 634 (749)
..+.+. .+++|+|+|+|++ .+.++++++++++.++|.|+|.+ +++..+++. +|++|+||.
T Consensus 220 ~~l~~~-~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~v~ps~ 279 (371)
T cd04962 220 AKVRKE-VPARLLLVGDGPE------------RSPAERLARELGLQDDVLFLGKQ------DHVEELLSI-ADLFLLPSE 279 (371)
T ss_pred HHHHhc-CCceEEEEcCCcC------------HHHHHHHHHHcCCCceEEEecCc------ccHHHHHHh-cCEEEeCCC
Confidence 998765 4689999999977 56788888999999999999943 268899995 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhC
Q 036539 635 YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECY 714 (749)
Q Consensus 635 ~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~y 714 (749)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+ +.+||+.+.+|++++++.+.++|
T Consensus 280 ~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~----l~~~~~~~~~~~~~~~~~~~~~f 355 (371)
T cd04962 280 KESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALS----LLEDDELWQEFSRAARNRAAERF 355 (371)
T ss_pred cCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999965 44799999999999999988999
Q ss_pred CHHHHHHHHHHHHHH
Q 036539 715 TWKIYANKMLNMGCM 729 (749)
Q Consensus 715 sw~~~a~~ll~ly~~ 729 (749)
||+.+++++.++|+.
T Consensus 356 s~~~~~~~~~~~y~~ 370 (371)
T cd04962 356 DSERIVPQYEALYRR 370 (371)
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999999863
No 20
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=3e-39 Score=367.93 Aligned_cols=375 Identities=18% Similarity=0.204 Sum_probs=264.4
Q ss_pred CceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCcccc
Q 036539 236 PILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEP 315 (749)
Q Consensus 236 pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~ 315 (749)
-++|||++++ +..|- +..||.+.++. +|+++|+++||+|+ |+|...... +.
T Consensus 56 ~~~mrI~~~~-~~~~~-------~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~~---------~~ 106 (465)
T PLN02871 56 SRPRRIALFV-EPSPF-------SYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGVP---------QE 106 (465)
T ss_pred CCCceEEEEE-CCcCC-------cccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCC---------cc
Confidence 4568999996 43321 45799999998 67777899999999 888653211 01
Q ss_pred ccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHcCCCcEE
Q 036539 316 IEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG-NLVASVMASKLGITQA 394 (749)
Q Consensus 316 i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~-~lva~lla~~~gvp~v 394 (749)
. .++.+++++.... ++ ..... +.+ .+...+.+.+. +.+|||||+|.+.. ...+.++++..++|++
T Consensus 107 ~---~g~~v~~~~~~~~-~~----~~~~~-~~~--~~~~~l~~~i~---~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V 172 (465)
T PLN02871 107 F---HGAKVIGSWSFPC-PF----YQKVP-LSL--ALSPRIISEVA---RFKPDLIHASSPGIMVFGALFYAKLLCVPLV 172 (465)
T ss_pred c---cCceeeccCCcCC-cc----CCCce-eec--cCCHHHHHHHH---hCCCCEEEECCCchhHHHHHHHHHHhCCCEE
Confidence 1 1234443322111 00 00000 000 01112223333 24899999998654 3455567788899999
Q ss_pred EEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccC
Q 036539 395 TIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGI 474 (749)
Q Consensus 395 ~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi 474 (749)
++.|+......+... +..... ......+...+.+|.|+++|....+... ..|.
T Consensus 173 ~~~h~~~~~~~~~~~--~~~~~~-----~~~~~~r~~~~~ad~ii~~S~~~~~~l~--------------------~~~~ 225 (465)
T PLN02871 173 MSYHTHVPVYIPRYT--FSWLVK-----PMWDIIRFLHRAADLTLVTSPALGKELE--------------------AAGV 225 (465)
T ss_pred EEEecCchhhhhccc--chhhHH-----HHHHHHHHHHhhCCEEEECCHHHHHHHH--------------------HcCC
Confidence 999976322111111 110000 0012245567889999999987766211 1121
Q ss_pred CCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHH
Q 036539 475 DVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWY 554 (749)
Q Consensus 475 ~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~ 554 (749)
. ...++.+||||+|.+.|.|....... +..+.. ..+++++|+|+||+.+.||++.|++++
T Consensus 226 ~-~~~kv~vi~nGvd~~~f~p~~~~~~~------------------~~~~~~-~~~~~~~i~~vGrl~~~K~~~~li~a~ 285 (465)
T PLN02871 226 T-AANRIRVWNKGVDSESFHPRFRSEEM------------------RARLSG-GEPEKPLIVYVGRLGAEKNLDFLKRVM 285 (465)
T ss_pred C-CcCeEEEeCCccCccccCCccccHHH------------------HHHhcC-CCCCCeEEEEeCCCchhhhHHHHHHHH
Confidence 1 15689999999999988775332211 011211 134678999999999999999999999
Q ss_pred HHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC
Q 036539 555 GKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL 634 (749)
Q Consensus 555 ~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~ 634 (749)
+++ ++++|+|+|+|+. .+.++++++. .+|.|+| .++.+++..+|+. +|++|+||.
T Consensus 286 ~~~----~~~~l~ivG~G~~------------~~~l~~~~~~----~~V~f~G----~v~~~ev~~~~~~-aDv~V~pS~ 340 (465)
T PLN02871 286 ERL----PGARLAFVGDGPY------------REELEKMFAG----TPTVFTG----MLQGDELSQAYAS-GDVFVMPSE 340 (465)
T ss_pred HhC----CCcEEEEEeCChH------------HHHHHHHhcc----CCeEEec----cCCHHHHHHHHHH-CCEEEECCc
Confidence 876 4799999999876 4566666653 3699999 7778899999995 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCcccccccccc---CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 036539 635 YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD---GVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRIN 711 (749)
Q Consensus 635 ~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d---g~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~ 711 (749)
.|+||++++|||+||+|||+|+.||..|++.+ +.+|++++|+|+++++++|.++ ++|++.+++|++++++++
T Consensus 341 ~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~l----l~~~~~~~~~~~~a~~~~- 415 (465)
T PLN02871 341 SETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETL----LADPELRERMGAAAREEV- 415 (465)
T ss_pred ccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHH----HhCHHHHHHHHHHHHHHH-
Confidence 99999999999999999999999999999999 9999999999999999999654 479999999999999998
Q ss_pred HhCCHHHHHHHHHH-HHHHh
Q 036539 712 ECYTWKIYANKMLN-MGCMY 730 (749)
Q Consensus 712 ~~ysw~~~a~~ll~-ly~~~ 730 (749)
++|||+.+++++++ .|+..
T Consensus 416 ~~fsw~~~a~~l~~~~Y~~~ 435 (465)
T PLN02871 416 EKWDWRAATRKLRNEQYSAA 435 (465)
T ss_pred HhCCHHHHHHHHHHHHHHHH
Confidence 68999999999998 57654
No 21
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=5.9e-39 Score=354.74 Aligned_cols=379 Identities=22% Similarity=0.269 Sum_probs=271.0
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
|||++++..++|. ..||.++++. +|++.|+++ |+|+ |+|..... ..
T Consensus 1 mkI~~i~~~~~p~--------~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~~~-------------~~ 46 (388)
T TIGR02149 1 MKVTVLTREYPPN--------VYGGAGVHVE--------ELTRELARL-MDVD----VRCFGDQR-------------FD 46 (388)
T ss_pred CeeEEEecccCcc--------ccccHhHHHH--------HHHHHHHHh-cCee----EEcCCCch-------------hc
Confidence 7999998766531 2499999999 666666666 7777 66643111 01
Q ss_pred ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEec
Q 036539 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAH 398 (749)
Q Consensus 319 ~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H 398 (749)
..++.+.+++..... ......+..+..++. ......+||+||+|.+..++.+.++++..++|++++.|
T Consensus 47 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~h 114 (388)
T TIGR02149 47 SEGLTVKGYRPWSEL---------KEANKALGTFSVDLA---MANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTAH 114 (388)
T ss_pred CCCeEEEEecChhhc---------cchhhhhhhhhHHHH---HhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEee
Confidence 124566666532210 011111222222211 11113479999999988777777777778999999999
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
++..... .........+.+. ...++..++.+|.||++|....+...+. ..|++ .
T Consensus 115 ~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~ad~vi~~S~~~~~~~~~~------------------~~~~~--~ 168 (388)
T TIGR02149 115 SLEPLRP----WKEEQLGGGYKLS--SWAEKTAIEAADRVIAVSGGMREDILKY------------------YPDLD--P 168 (388)
T ss_pred ccccccc----ccccccccchhHH--HHHHHHHHhhCCEEEEccHHHHHHHHHH------------------cCCCC--c
Confidence 8743210 0000111112111 1245678899999999998766522111 01333 5
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.+||||+|.+.|.|...... ++++|+ ++++++|+|+||+.+.||++.|++|+.++.
T Consensus 169 ~~i~vi~ng~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~ 227 (388)
T TIGR02149 169 EKVHVIYNGIDTKEYKPDDGNVV-------------------LDRYGI--DRSRPYILFVGRITRQKGVPHLLDAVHYIP 227 (388)
T ss_pred ceEEEecCCCChhhcCCCchHHH-------------------HHHhCC--CCCceEEEEEcccccccCHHHHHHHHHHHh
Confidence 68999999999988876533221 234565 667889999999999999999999999885
Q ss_pred ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCC-CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCC
Q 036539 559 RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL-KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEA 637 (749)
Q Consensus 559 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L-~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~ 637 (749)
++++++++|+++. ..+..+.+++.+.+++. .++|.|++. .++.+++..+++. +|++|+||.+|+
T Consensus 228 ---~~~~l~i~g~g~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~~~~~~-aDv~v~ps~~e~ 292 (388)
T TIGR02149 228 ---KDVQVVLCAGAPD--------TPEVAEEVRQAVALLDRNRTGIIWINK---MLPKEELVELLSN-AEVFVCPSIYEP 292 (388)
T ss_pred ---hcCcEEEEeCCCC--------cHHHHHHHHHHHHHhccccCceEEecC---CCCHHHHHHHHHh-CCEEEeCCccCC
Confidence 3689999988765 11224556666777665 345787651 6778999999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNG------DESSDKIADFFEACKVDPTYWNKFSTEGLKRIN 711 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~------e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~ 711 (749)
||++++|||+||+|||+|+.||..|++.++.+|++++++|+ ++++++|.+ +.+||+.+++|++++++++.
T Consensus 293 ~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~----l~~~~~~~~~~~~~a~~~~~ 368 (388)
T TIGR02149 293 LGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINI----LLADPELAKKMGIAGRKRAE 368 (388)
T ss_pred CChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988 788888854 55899999999999999999
Q ss_pred HhCCHHHHHHHHHHHHHH
Q 036539 712 ECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 712 ~~ysw~~~a~~ll~ly~~ 729 (749)
++|||+.+++++.++|+.
T Consensus 369 ~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 369 EEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HhCCHHHHHHHHHHHHHh
Confidence 999999999999999874
No 22
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=5.9e-38 Score=348.35 Aligned_cols=375 Identities=15% Similarity=0.212 Sum_probs=272.3
Q ss_pred ceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccc
Q 036539 237 ILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPI 316 (749)
Q Consensus 237 m~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i 316 (749)
|+-||+|++.--+|-|. ...||+++++. +++++|+. +|+ |+|...+.-. ..+..
T Consensus 1 ~~~~~~~~~~~~~~~p~-----~~~g~ve~~~~--------~~~~~l~~---~~~----~~~~~~~~~~------~~~~~ 54 (380)
T PRK15484 1 MIDKIIFTVTPIFSIPP-----RGAAAVETWIY--------QVAKRTSI---PNR----IACIKNPGYP------EYTKV 54 (380)
T ss_pred CCceEEEEeccCCCCCC-----ccccHHHHHHH--------HhhhhccC---Cee----EEEecCCCCC------chhhc
Confidence 77899998877776542 24699999999 66666643 899 9998755310 11111
Q ss_pred cCccceEEEEecCccCCc-cccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEE
Q 036539 317 EGTKHSNILRVPFKTDKG-ILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQAT 395 (749)
Q Consensus 317 ~~~~~~~I~rvp~~~~~~-~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~ 395 (749)
.+|+.+.++++....+ ...+|.+. .- ..|.......+......++||||+|... .+...+..+..+.+.+.
T Consensus 55 --~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~vi~v~~~~-~~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 55 --NDNCDIHYIGFSRIYKRLFQKWTRL-DP----LPYSQRILNIAHKFTITKDSVIVIHNSM-KLYRQIRERAPQAKLVM 126 (380)
T ss_pred --cCCCceEEEEeccccchhhhhhhcc-Cc----hhHHHHHHHHHHhcCCCCCcEEEEeCcH-HhHHHHHhhCCCCCEEE
Confidence 1245666666543211 11122221 11 2333334333333324579999999755 34444555556789999
Q ss_pred EecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCC
Q 036539 396 IAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGID 475 (749)
Q Consensus 396 t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~ 475 (749)
+.|.... ...+..++.||++|....+. + ..+.+
T Consensus 127 ~~h~~~~--------------------------~~~~~~~~~ii~~S~~~~~~-------~--------------~~~~~ 159 (380)
T PRK15484 127 HMHNAFE--------------------------PELLDKNAKIIVPSQFLKKF-------Y--------------EERLP 159 (380)
T ss_pred EEecccC--------------------------hhHhccCCEEEEcCHHHHHH-------H--------------HhhCC
Confidence 9995411 01245679999999776651 1 11122
Q ss_pred CCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHH
Q 036539 476 VLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYG 555 (749)
Q Consensus 476 ~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~ 555 (749)
..++.+||||+|.+.|.+...... ++.+|+ ++++++|+|+||+.+.||++.|++|+.
T Consensus 160 --~~~i~vIpngvd~~~~~~~~~~~~-------------------~~~~~~--~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 160 --NADISIVPNGFCLETYQSNPQPNL-------------------RQQLNI--SPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred --CCCEEEecCCCCHHHcCCcchHHH-------------------HHHhCC--CCCCeEEEEeccCccccCHHHHHHHHH
Confidence 568999999999988876433211 133555 556789999999999999999999999
Q ss_pred HhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCC
Q 036539 556 KNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALY 635 (749)
Q Consensus 556 ~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~ 635 (749)
++.+..|+++|+|+|++... ...+...+.+.+++++++++ .+|.|+| .++.+++..+|+. +|++|+||.+
T Consensus 217 ~l~~~~p~~~lvivG~g~~~---~~~~~~~~~~~l~~~~~~l~--~~v~~~G----~~~~~~l~~~~~~-aDv~v~pS~~ 286 (380)
T PRK15484 217 KLATAHSNLKLVVVGDPTAS---SKGEKAAYQKKVLEAAKRIG--DRCIMLG----GQPPEKMHNYYPL-ADLVVVPSQV 286 (380)
T ss_pred HHHHhCCCeEEEEEeCCccc---cccchhHHHHHHHHHHHhcC--CcEEEeC----CCCHHHHHHHHHh-CCEEEeCCCC
Confidence 99888899999999998652 11223345567777777765 5799999 7778899999994 9999999975
Q ss_pred -CCCcHHHHHHHHcCCcEEEcCccccccccccCceEE-EECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 036539 636 -EAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGF-HIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINEC 713 (749)
Q Consensus 636 -E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~-lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ 713 (749)
|+||++++|||+||+|||+|+.||..|++.++.+|+ +++|.|++++|++|.+ +++|++. .+|+++|++.+.++
T Consensus 287 ~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~----ll~d~~~-~~~~~~ar~~~~~~ 361 (380)
T PRK15484 287 EEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINR----TLADPEL-TQIAEQAKDFVFSK 361 (380)
T ss_pred ccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHH----HHcCHHH-HHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999 5688999999999955 4588885 78999999999999
Q ss_pred CCHHHHHHHHHHHHHHh
Q 036539 714 YTWKIYANKMLNMGCMY 730 (749)
Q Consensus 714 ysw~~~a~~ll~ly~~~ 730 (749)
|||+.++++++++|+.|
T Consensus 362 fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 362 YSWEGVTQRFEEQIHNW 378 (380)
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999998764
No 23
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=3.6e-37 Score=343.38 Aligned_cols=366 Identities=16% Similarity=0.184 Sum_probs=248.1
Q ss_pred HHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCccccccccccccccchHHHHH---
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQ--- 354 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~--- 354 (749)
+||++|+++||+|+ ++|....... .+ ++++++++...... ...++|...+..
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~~~-----------~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAAPP-----------PG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCCCC-----------CC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 67888899999999 9987732210 11 57888887553311 123334333322
Q ss_pred ---HHHHHHHH--HcCCCceEEEEcCCCchHHHHHHHHc-CCCcEEEEecCCcccccCCCcchhh-hcCcc----cccch
Q 036539 355 ---DATTMILE--FLGGKPDLIIGNYSDGNLVASVMASK-LGITQATIAHALEKTKYEDSDVKWK-ELDPK----YHFSC 423 (749)
Q Consensus 355 ---~~~~~l~~--~l~~~pDIIh~h~~~~~lva~lla~~-~gvp~v~t~H~l~~~k~~~s~~~~~-~~~~~----y~f~~ 423 (749)
.+.+.+.. ..+.+|||||+|...+ .+..+++. .++|++...|.+..... ++.... ..... .+...
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~--~~~~l~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 145 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWG--ETLFLKDVWPDAPLIGYFEFYYRAEG--ADVGFDPEFPPSLDDALRLRN 145 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccc--hhhhHHHhCCCCCEEEEEeeeecCCC--CCCCCCCCCCCchhHHHHHHH
Confidence 22222222 1245899999997554 22334444 35888876654322111 110000 00000 00000
Q ss_pred hhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhh
Q 036539 424 QFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRL 503 (749)
Q Consensus 424 ~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl 503 (749)
........++.+|.+|++|....+... ..+..|+.|||||+|.+.|.|........
T Consensus 146 ~~~~~~~~~~~ad~vi~~s~~~~~~~~------------------------~~~~~ki~vI~ngvd~~~f~~~~~~~~~~ 201 (396)
T cd03818 146 RNALILLALAQADAGVSPTRWQRSTFP------------------------AELRSRISVIHDGIDTDRLRPDPQARLRL 201 (396)
T ss_pred hhhHhHHHHHhCCEEECCCHHHHhhCc------------------------HhhccceEEeCCCccccccCCCchhhhcc
Confidence 111134578999999999987765211 11146899999999999988764432211
Q ss_pred hccchhhHHhhccccchhhhcCccCCCCCcEEEEEec-ccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchh
Q 036539 504 TKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMAR-LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDRE 582 (749)
Q Consensus 504 ~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~e 582 (749)
. ...++ .+++++|+|+|| +.+.||++.|++|++++.+..++++|+|+|++..........
T Consensus 202 ~-----------------~~~~~--~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~ 262 (396)
T cd03818 202 P-----------------NGRVL--TPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPD 262 (396)
T ss_pred c-----------------ccccC--CCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCC
Confidence 1 11122 456789999998 999999999999999998888999999999853200000000
Q ss_pred HHHHHHHHHH-HHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccc
Q 036539 583 ETAEIKKMHA-LMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPA 661 (749)
Q Consensus 583 e~~~~~~l~~-li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~ 661 (749)
...+.+.+.+ +..+++ .++|.|+| .++.+++..+|+ ++|++|+||..|++|++++||||||+|||+|+.||..
T Consensus 263 ~~~~~~~~~~~~~~~~~-~~~V~f~G----~v~~~~~~~~l~-~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~ 336 (396)
T cd03818 263 GESWKQHMLDELGGRLD-LSRVHFLG----RVPYDQYLALLQ-VSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVR 336 (396)
T ss_pred cccHHHHHHHHhhcccC-cceEEEeC----CCCHHHHHHHHH-hCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCch
Confidence 0011222222 222222 47899999 778899999999 4999999999999999999999999999999999999
Q ss_pred cccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 662 EIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 662 EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
|++.++.+|++++++|++++|++|.+ +++||+.+.+|+++|++++.++|||+.+++++++
T Consensus 337 e~i~~~~~G~lv~~~d~~~la~~i~~----ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 337 EVITDGENGLLVDFFDPDALAAAVIE----LLDDPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred hhcccCCceEEcCCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 99999999999999999999999965 4489999999999999999889999999999863
No 24
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=2.9e-37 Score=340.42 Aligned_cols=365 Identities=17% Similarity=0.186 Sum_probs=261.0
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+++..+. +.||.+.++. .|++.|.++|+++. |++....+. .. .... .
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~~~----~~---~~~~-~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEVSA----FR---KRIQ-R 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCCCh----hH---HHHH-h
Confidence 677775443 3599999999 66667788899987 776321111 11 1111 1
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcE-EEEec
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQ-ATIAH 398 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~-v~t~H 398 (749)
.++.+++++.... . . ..+...+.+.+.+ .+|||||+|...+ ..+.++++..++|. +.+.|
T Consensus 52 ~~i~~~~~~~~~~----------~-~----~~~~~~l~~~l~~---~~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPG----------K-D----VAVYPQLYRLLRQ---LRPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCC----------C-C----hHHHHHHHHHHHH---hCCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 2456666653321 0 0 1122233444444 3899999997544 33445566677774 34445
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
+...... ....| .+. ...+.....+|.+|++|....+...+ ..|++ .
T Consensus 113 ~~~~~~~--~~~~~-----~~~-----~~~~~~~~~~~~~i~vs~~~~~~~~~-------------------~~~~~--~ 159 (374)
T TIGR03088 113 GRDVFDL--DGSNW-----KYR-----WLRRLYRPLIHHYVAVSRDLEDWLRG-------------------PVKVP--P 159 (374)
T ss_pred Ccccccc--hhhHH-----HHH-----HHHHHHHhcCCeEEEeCHHHHHHHHH-------------------hcCCC--h
Confidence 3211100 00011 011 12334456789999999876652111 11333 6
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.+||||+|.+.|.+......... +.... +.++++|+++||+++.||++.|++|+.++.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~~~~~~~-----------------~~~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRGDRSPIL-----------------PPDFF--ADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred hhEEEeccCccccccCCCccchhhhh-----------------HhhcC--CCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 78999999999988876532211100 00111 456789999999999999999999999987
Q ss_pred ccCC----CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC
Q 036539 559 RLRN----LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL 634 (749)
Q Consensus 559 ~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~ 634 (749)
+..+ +++|+++|+|+. .+.+++.++++++..++.|+|.+ +++..+++. +|++|+||.
T Consensus 221 ~~~~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~pS~ 281 (374)
T TIGR03088 221 RQLPEGAERLRLVIVGDGPA------------RGACEQMVRAAGLAHLVWLPGER------DDVPALMQA-LDLFVLPSL 281 (374)
T ss_pred HhCcccccceEEEEecCCch------------HHHHHHHHHHcCCcceEEEcCCc------CCHHHHHHh-cCEEEeccc
Confidence 6544 689999999876 56788899999999999999943 378899994 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhC
Q 036539 635 YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECY 714 (749)
Q Consensus 635 ~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~y 714 (749)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.++ .+|++.+.+++++|++++.++|
T Consensus 282 ~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l----~~~~~~~~~~~~~a~~~~~~~f 357 (374)
T TIGR03088 282 AEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPY----VSDPAARRAHGAAGRARAEQQF 357 (374)
T ss_pred cccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHH----HhCHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999654 4799999999999999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 036539 715 TWKIYANKMLNMGCM 729 (749)
Q Consensus 715 sw~~~a~~ll~ly~~ 729 (749)
||+.++++++++|+.
T Consensus 358 s~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 358 SINAMVAAYAGLYDQ 372 (374)
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999974
No 25
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=2.5e-38 Score=329.34 Aligned_cols=363 Identities=17% Similarity=0.226 Sum_probs=280.3
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
++|+|+|+|+|| .+||++.++. .|++.|.+.||.|. ++|..+.+..|-.+-
T Consensus 1 ~~i~mVsdff~P---------~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~giryl-------- 51 (426)
T KOG1111|consen 1 SRILMVSDFFYP---------STGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVGIRYL-------- 51 (426)
T ss_pred CcceeeCccccc---------CCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCccceeee--------
Confidence 579999999995 5799999999 99999999999998 999998887654322
Q ss_pred ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchH--HHHHHHHcCCCcEEEE
Q 036539 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNL--VASVMASKLGITQATI 396 (749)
Q Consensus 319 ~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~l--va~lla~~~gvp~v~t 396 (749)
+.+..++.+|+... .+....|.+...+.-+...++ +++..|||+|.+.+.+ -+.+.++.+|...|+|
T Consensus 52 t~glkVyylp~~v~--------~n~tT~ptv~~~~Pllr~i~l---rE~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVVG--------YNQTTFPTVFSDFPLLRPILL---RERIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeeee--------ecccchhhhhccCcccchhhh---hhceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 22477787776532 122222222211111122223 3489999999988743 4667788999999999
Q ss_pred ecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCC
Q 036539 397 AHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDV 476 (749)
Q Consensus 397 ~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~ 476 (749)
-|++ |...++.-....... .+.+...|.+||+|+...+.+. +...++
T Consensus 121 dHSl----fGfad~~si~~n~ll---------~~sL~~id~~IcVshtskentv-------------------lr~~L~- 167 (426)
T KOG1111|consen 121 DHSL----FGFADIGSILTNKLL---------PLSLANIDRIICVSHTSKENTV-------------------LRGALA- 167 (426)
T ss_pred cccc----ccccchhhhhhccee---------eeeecCCCcEEEEeecCCCceE-------------------EEeccC-
Confidence 9997 333333222222221 1256789999999976554211 111234
Q ss_pred CCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHH
Q 036539 477 LDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGK 556 (749)
Q Consensus 477 ~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~ 556 (749)
..|+.+|||.++...|.|...... +.+...|..++||-.+||+|.|++++++
T Consensus 168 -p~kvsvIPnAv~~~~f~P~~~~~~---------------------------S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 168 -PAKVSVIPNAVVTHTFTPDAADKP---------------------------SADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred -HhHeeeccceeeccccccCccccC---------------------------CCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 779999999999999999654310 2344789999999999999999999999
Q ss_pred hHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCC
Q 036539 557 NKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYE 636 (749)
Q Consensus 557 l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E 636 (749)
+.+++|+++|+|+|+||. ...+++..+++.+.++|.++| .++.+++.+.|.+ .|+|+.||+.|
T Consensus 220 vc~~~p~vrfii~GDGPk------------~i~lee~lEk~~l~~rV~~lG----~v~h~~Vr~vl~~-G~IFlntSlTE 282 (426)
T KOG1111|consen 220 VCDKHPEVRFIIIGDGPK------------RIDLEEMLEKLFLQDRVVMLG----TVPHDRVRDVLVR-GDIFLNTSLTE 282 (426)
T ss_pred HHhcCCCeeEEEecCCcc------------cchHHHHHHHhhccCceEEec----ccchHHHHHHHhc-CcEEeccHHHH
Confidence 999999999999999998 677888999999999999999 8889999999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCH
Q 036539 637 AFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTW 716 (749)
Q Consensus 637 ~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw 716 (749)
+||++++|||+||+|||+|++||.+|++.++ -......+++++++++.+++.++...|.. -.+++.+-|+|
T Consensus 283 afc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~p~~-------~h~~v~~~y~w 353 (426)
T KOG1111|consen 283 AFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTLPLE-------FHDRVKKMYSW 353 (426)
T ss_pred HHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccCchh-------HHHHHHHhccH
Confidence 9999999999999999999999999999764 23344557999999999999888777543 34567788999
Q ss_pred HHHHHHHHHHHH
Q 036539 717 KIYANKMLNMGC 728 (749)
Q Consensus 717 ~~~a~~ll~ly~ 728 (749)
+.++++.+++|.
T Consensus 354 ~dVa~rTekvy~ 365 (426)
T KOG1111|consen 354 KDVAERTEKVYD 365 (426)
T ss_pred HHHHHHHHHHHH
Confidence 999999999863
No 26
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=3.2e-37 Score=341.35 Aligned_cols=386 Identities=18% Similarity=0.237 Sum_probs=261.0
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
|||+++.+... .||.++++. +|+++|+++||+|+ |+|...+.. .+. .+...+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~---~~~--~~~~~~ 52 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDPS---HCF--EETKDG 52 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCch---hcc--hhccCC
Confidence 79999976543 589999999 67777899999999 998642211 000 011111
Q ss_pred ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHH--HHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEE
Q 036539 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMIL--EFLGGKPDLIIGNYSDGNLVASVMASKLGITQATI 396 (749)
Q Consensus 319 ~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~--~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t 396 (749)
++.+...+.....++ ..+. ..+..+.......+. .....++|+||+|....+..+ +....+.|++++
T Consensus 53 --~~~i~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~--~~~~~~~~~i~~ 121 (392)
T cd03805 53 --TLPVRVRGDWLPRSI----FGRF---HILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVPL--LKLFSPSKILFY 121 (392)
T ss_pred --eeEEEEEeEEEcchh----hHhH---HHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHHH--HHHhcCCcEEEE
Confidence 122222211100000 0000 011112111111111 112468999999875543322 223334889999
Q ss_pred ecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCC
Q 036539 397 AHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDV 476 (749)
Q Consensus 397 ~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~ 476 (749)
.|..... . .....+. ...++. .....++..++.+|.|+++|....+...+. .....
T Consensus 122 ~h~~~~~-~-~~~~~~~--~~~~~~-~~~~~e~~~~~~ad~ii~~s~~~~~~~~~~------------------~~~~~- 177 (392)
T cd03805 122 CHFPDQL-L-AQRGSLL--KRLYRK-PFDWLEEFTTGMADKIVVNSNFTASVFKKT------------------FPSLA- 177 (392)
T ss_pred EecChHH-h-cCCCcHH--HHHHHH-HHHHHHHHHhhCceEEEEcChhHHHHHHHH------------------hcccc-
Confidence 9943211 0 0000000 001110 011246678899999999997765521111 01111
Q ss_pred CCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHH
Q 036539 477 LDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGK 556 (749)
Q Consensus 477 ~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~ 556 (749)
..++.+|+||+|.+.|.+....... +..+. .+++++|+++||+.+.||++.+++|+.+
T Consensus 178 -~~~~~vi~n~vd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~grl~~~Kg~~~ll~a~~~ 235 (392)
T cd03805 178 -KNPREVVYPCVDTDSFESTSEDPDP-------------------GLLIP--KSGKKTFLSINRFERKKNIALAIEAFAI 235 (392)
T ss_pred -cCCcceeCCCcCHHHcCcccccccc-------------------ccccc--CCCceEEEEEeeecccCChHHHHHHHHH
Confidence 2344699999999888664332100 11122 4677899999999999999999999999
Q ss_pred hHccC---CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHH-cCCCCcEEEecCccCcCChHHHHHHHHccCcEEEEC
Q 036539 557 NKRLR---NLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEK-YQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQP 632 (749)
Q Consensus 557 l~~~~---~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~-~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~P 632 (749)
+.+.. ++++|+++|+++.. ..++..+.+++++++++ +++.++|.|+| .++.+++..+++. +|++++|
T Consensus 236 l~~~~~~~~~~~l~i~G~~~~~----~~~~~~~~~~l~~~~~~~~~l~~~V~f~g----~~~~~~~~~~l~~-ad~~l~~ 306 (392)
T cd03805 236 LKDKLAEFKNVRLVIAGGYDPR----VAENVEYLEELQRLAEELLLLEDQVIFLP----SISDSQKELLLSS-ARALLYT 306 (392)
T ss_pred HHhhcccccCeEEEEEcCCCCC----CchhHHHHHHHHHHHHHhcCCCceEEEeC----CCChHHHHHHHhh-CeEEEEC
Confidence 98765 78999999998651 22334556788999999 99999999999 7778899999995 9999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 036539 633 ALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINE 712 (749)
Q Consensus 633 S~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~ 712 (749)
|..|+||++++|||+||+|||+|+.||..|++.++.+|+++++ |+++++++|.+ +.++++.+++|+++|++++.+
T Consensus 307 s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~----l~~~~~~~~~~~~~a~~~~~~ 381 (392)
T cd03805 307 PSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLK----LANDPDLADRMGAAGRKRVKE 381 (392)
T ss_pred CCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHH----HHhChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999976 89999999965 447999999999999999999
Q ss_pred hCCHHHHHHHH
Q 036539 713 CYTWKIYANKM 723 (749)
Q Consensus 713 ~ysw~~~a~~l 723 (749)
+|||+.+++++
T Consensus 382 ~~s~~~~~~~~ 392 (392)
T cd03805 382 KFSTEAFAERL 392 (392)
T ss_pred hcCHHHHhhhC
Confidence 99999998864
No 27
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=8.1e-37 Score=334.20 Aligned_cols=280 Identities=20% Similarity=0.291 Sum_probs=229.9
Q ss_pred CCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHH
Q 036539 366 GKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQE 445 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~ 445 (749)
.+||+||+|+...+..+..++++.|+|++++.|+........ +..... + ......+...++.+|.|+++|...
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~----~~~~~~-~--~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLA----LLLRSR-W--ALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccch----hhcccc-h--hHHHHHHHHHHHhcCEEEECCHHH
Confidence 489999999877777778888999999999999754322111 000000 1 111123455678999999999877
Q ss_pred HhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcC
Q 036539 446 IAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIG 525 (749)
Q Consensus 446 ~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g 525 (749)
.+.. ...|++ ..++.++|||+|.+.|.+...
T Consensus 154 ~~~~--------------------~~~~~~--~~~i~vi~~g~d~~~~~~~~~--------------------------- 184 (367)
T cd05844 154 RDRL--------------------LALGFP--PEKVHVHPIGVDTAKFTPATP--------------------------- 184 (367)
T ss_pred HHHH--------------------HHcCCC--HHHeEEecCCCCHHhcCCCCC---------------------------
Confidence 6521 112444 678999999999887754311
Q ss_pred ccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEE
Q 036539 526 YLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRW 605 (749)
Q Consensus 526 ~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~f 605 (749)
..++++++++|++.+.||++.+++|+..+.+..++++|+|+|+++. .++++++++++++.++|+|
T Consensus 185 ---~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~ 249 (367)
T cd05844 185 ---ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPL------------LAALEALARALGLGGRVTF 249 (367)
T ss_pred ---CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchH------------HHHHHHHHHHcCCCCeEEE
Confidence 2356789999999999999999999999988788999999998865 5678888999999999999
Q ss_pred ecCccCcCChHHHHHHHHccCcEEEECCC------CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 036539 606 IAAQSDRLRNGELYRCIADTKGAFVQPAL------YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGD 679 (749)
Q Consensus 606 lG~~~~~~~~~el~~~la~aadvfV~PS~------~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e 679 (749)
+| .++.+++..+++. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|+++++.|++
T Consensus 250 ~g----~~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~ 324 (367)
T cd05844 250 LG----AQPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVA 324 (367)
T ss_pred CC----CCCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHH
Confidence 99 7778999999995 999999997 599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 680 ESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 680 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
+++++|.++ .+|++.+++|+.++++++.++|||+.+++++.+
T Consensus 325 ~l~~~i~~l----~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 325 ALAAALGRL----LADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred HHHHHHHHH----HcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 999999654 489999999999999999999999999999876
No 28
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=5e-36 Score=326.40 Aligned_cols=361 Identities=17% Similarity=0.168 Sum_probs=254.1
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+|++.+++| |..||++.++. +|+++|.++||+|+ |+|........ ....
T Consensus 1 ~i~~i~~~~~~--------~~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~~~---------~~~~ 51 (363)
T cd04955 1 KIAIIGTRGIP--------AKYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPKQK---------ETEY 51 (363)
T ss_pred CeEEEecCcCC--------cccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCCCc---------cccc
Confidence 69999999987 45799999999 77777899999999 88875322210 1112
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecC
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHA 399 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~ 399 (749)
.++.+.++|.....+ . .........+...+. .+.++|+||...+.. ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGG--------L---GTIIYDILAILHALF--VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccc--------h---hhhHHHHHHHHHHHh--ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 356777777543111 0 000000011111111 134566666655544 33344455669999999998
Q ss_pred CcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCC
Q 036539 400 LEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479 (749)
Q Consensus 400 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ 479 (749)
..... ..|..... . .....++..++.+|.||++|....+... ...|.+
T Consensus 118 ~~~~~-----~~~~~~~~--~--~~~~~~~~~~~~ad~ii~~s~~~~~~~~-------------------~~~~~~---- 165 (363)
T cd04955 118 LEWKR-----AKWGRPAK--R--YLKFGEKLAVKFADRLIADSPGIKEYLK-------------------EKYGRD---- 165 (363)
T ss_pred cceee-----cccccchh--H--HHHHHHHHHHhhccEEEeCCHHHHHHHH-------------------HhcCCC----
Confidence 64321 11211110 0 1123456678899999999987766211 111222
Q ss_pred ceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHc
Q 036539 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKR 559 (749)
Q Consensus 480 ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~ 559 (749)
+ .+||||+|...+.+..... +..+. .+++.++++||+.+.||++.+++|++++..
T Consensus 166 ~-~~i~ngv~~~~~~~~~~~~---------------------~~~~~---~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 220 (363)
T cd04955 166 S-TYIPYGADHVVSSEEDEIL---------------------KKYGL---EPGRYYLLVGRIVPENNIDDLIEAFSKSNS 220 (363)
T ss_pred C-eeeCCCcChhhcchhhhhH---------------------HhcCC---CCCcEEEEEecccccCCHHHHHHHHHhhcc
Confidence 2 7999999987765411110 11332 334578899999999999999999998864
Q ss_pred cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHH-HcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCC-CC
Q 036539 560 LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALME-KYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALY-EA 637 (749)
Q Consensus 560 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~-~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~-E~ 637 (749)
+++|+|+|+++. ...+.+.+. .+++.++|+|+| .++.+++..+++. +|++++||.. |+
T Consensus 221 ---~~~l~ivG~~~~------------~~~~~~~~~~~~~~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~e~ 280 (363)
T cd04955 221 ---GKKLVIVGNADH------------NTPYGKLLKEKAAADPRIIFVG----PIYDQELLELLRY-AALFYLHGHSVGG 280 (363)
T ss_pred ---CceEEEEcCCCC------------cchHHHHHHHHhCCCCcEEEcc----ccChHHHHHHHHh-CCEEEeCCccCCC
Confidence 799999999865 122333333 677889999999 7778899999995 9999999998 99
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWK 717 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 717 (749)
||++++|||+||+|||+|+.|+..|++.+ +|+++++.|. ++++|. ++.+|++.+.++++++++++.++|||+
T Consensus 281 ~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~----~l~~~~~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 281 TNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLE----ELEADPEEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred CChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHH----HHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999976 7999988775 888885 455899999999999999998899999
Q ss_pred HHHHHHHHHHH
Q 036539 718 IYANKMLNMGC 728 (749)
Q Consensus 718 ~~a~~ll~ly~ 728 (749)
.++++++++|+
T Consensus 353 ~~~~~~~~~y~ 363 (363)
T cd04955 353 KIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHhC
Confidence 99999999884
No 29
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=1.7e-36 Score=354.95 Aligned_cols=291 Identities=12% Similarity=0.166 Sum_probs=220.1
Q ss_pred CCceEEEEcCCCchHHHHHHHHcCCCcEEE-EecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 366 GKPDLIIGNYSDGNLVASVMASKLGITQAT-IAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~~~gvp~v~-t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
.+|||||+|.+..+.++.++++..++|+++ +.|++..... .. .|+. .| ......+....++.+|++|..
T Consensus 399 ~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~--~~-~~~~---~~----~~l~~~l~~~~~~i~Vs~S~~ 468 (694)
T PRK15179 399 SVPSVVHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDR--PD-RYRV---EY----DIIYSELLKMRGVALSSNSQF 468 (694)
T ss_pred cCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEEeCCCccccc--hh-HHHH---HH----HHHHHHHHhcCCeEEEeCcHH
Confidence 489999999999888888888889999865 5676522111 00 1100 01 011111222234566666655
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
..+. +....|++ ..|+.|||||||...|.+......... .+
T Consensus 469 ~~~~-------------------l~~~~g~~--~~kI~VI~NGVd~~~f~~~~~~~~~~~------------------~~ 509 (694)
T PRK15179 469 AAHR-------------------YADWLGVD--ERRIPVVYNGLAPLKSVQDDACTAMMA------------------QF 509 (694)
T ss_pred HHHH-------------------HHHHcCCC--hhHEEEECCCcCHHhcCCCchhhHHHH------------------hh
Confidence 4431 11112444 679999999999887765332211100 01
Q ss_pred CccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE
Q 036539 525 GYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR 604 (749)
Q Consensus 525 g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 604 (749)
....+.+.++|+++||+++.||++.|++|+.++.+..++++|+|+|+|+. .+.++++++++++.++|.
T Consensus 510 ~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~------------~~~L~~l~~~lgL~~~V~ 577 (694)
T PRK15179 510 DARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPL------------LESVREFAQRLGMGERIL 577 (694)
T ss_pred ccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcc------------hHHHHHHHHHcCCCCcEE
Confidence 11113456789999999999999999999999988889999999999977 678999999999999999
Q ss_pred EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH--HHHH
Q 036539 605 WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNG--DESS 682 (749)
Q Consensus 605 flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~--e~lA 682 (749)
|+|++. ++..+|+ ++|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++++++|. ++++
T Consensus 578 flG~~~------dv~~ll~-aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La 650 (694)
T PRK15179 578 FTGLSR------RVGYWLT-QFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVA 650 (694)
T ss_pred EcCCcc------hHHHHHH-hcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHH
Confidence 999543 6888888 599999999999999999999999999999999999999999999999998874 6899
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 683 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
++|.+++..+..++ .+++++++++.++|||+.++++++++|+
T Consensus 651 ~aL~~ll~~l~~~~----~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 651 EALARIHDMCAADP----GIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred HHHHHHHhChhccH----HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99987775444454 5678899999899999999999999995
No 30
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=3e-36 Score=338.76 Aligned_cols=392 Identities=14% Similarity=0.092 Sum_probs=267.6
Q ss_pred CCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCc----
Q 036539 259 PDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKG---- 334 (749)
Q Consensus 259 p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~---- 334 (749)
-..||.++.+..+|-++.....+.=+-.|+.|..+|-++++......|.++--..-.-.+.+...+-+++-..+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (578)
T PRK15490 171 LGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDATIE 250 (578)
T ss_pred CCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhcccc
Confidence 4569999999977776554433333446788888888999997666554332111111333344555555221111
Q ss_pred --cccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEE-EecCCcccccCCCcch
Q 036539 335 --ILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQAT-IAHALEKTKYEDSDVK 411 (749)
Q Consensus 335 --~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~-t~H~l~~~k~~~s~~~ 411 (749)
.++.+++ ..|-...+.......+.+ ..+|||||+|...+++.+.++++..|+|+++ +.|+... ..
T Consensus 251 ~~~~~~~~~---~~~~~~~~~~~~l~~~ir--~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~----~~--- 318 (578)
T PRK15490 251 SPELRLLLS---HLPPVCKYGIKHLVPHLC--ERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPP----VV--- 318 (578)
T ss_pred chHHHHHHh---cCChHHHHHHHHHHHHHH--HcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCC----cc---
Confidence 0011000 011111122222222232 3499999999988888888888889999864 4665211 00
Q ss_pred hhhcCcccccchhhhHHHHHhhhCCE------EEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEec
Q 036539 412 WKELDPKYHFSCQFIADTIAMNATDF------IIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAA 485 (749)
Q Consensus 412 ~~~~~~~y~f~~~~~~e~~a~~~aD~------IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIp 485 (749)
... ....+...+..++. +++.|....+. +....|++ ..|+.|||
T Consensus 319 ~~r---------~~~~e~~~~~~a~~i~~~sd~v~~s~~v~~~-------------------l~~~lgip--~~KI~VIy 368 (578)
T PRK15490 319 RKR---------LFKPEYEPLYQALAVVPGVDFMSNNHCVTRH-------------------YADWLKLE--AKHFQVVY 368 (578)
T ss_pred hhh---------HHHHHHHHhhhhceeEecchhhhccHHHHHH-------------------HHHHhCCC--HHHEEEEe
Confidence 000 00011112233333 33444333220 11112444 77999999
Q ss_pred CCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeE
Q 036539 486 PGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVN 565 (749)
Q Consensus 486 nGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~ 565 (749)
||+|.+.|.|........+. ....++ +++.++|+++||+.+.||...+++++.++.+..++++
T Consensus 369 NGVD~~rf~p~~~~~~~~r~---------------~~~~~l--~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdir 431 (578)
T PRK15490 369 NGVLPPSTEPSSEVPHKIWQ---------------QFTQKT--QDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATR 431 (578)
T ss_pred CCcchhhcCccchhhHHHHH---------------Hhhhcc--CCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeE
Confidence 99999988775432111000 001222 3456799999999999999999999999887778999
Q ss_pred EEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHH
Q 036539 566 LVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEA 645 (749)
Q Consensus 566 LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEA 645 (749)
|+|+|+|+. .++++++++++++.++|.|+|+ .+++..+|+. +|+||+||.+|+||++++||
T Consensus 432 LvIVGdG~~------------~eeLk~la~elgL~d~V~FlG~------~~Dv~~~Laa-ADVfVlPS~~EGfp~vlLEA 492 (578)
T PRK15490 432 FVLVGDGDL------------RAEAQKRAEQLGILERILFVGA------SRDVGYWLQK-MNVFILFSRYEGLPNVLIEA 492 (578)
T ss_pred EEEEeCchh------------HHHHHHHHHHcCCCCcEEECCC------hhhHHHHHHh-CCEEEEcccccCccHHHHHH
Confidence 999999976 6789999999999999999994 3478889994 99999999999999999999
Q ss_pred HHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 646 MNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 646 Ma~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
|+||+|||+|+.||..|+|.++.+|++++++|++++++++..+ ..+..+...+..|+++|++++.++|||+.++++|++
T Consensus 493 MA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA-~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~k 571 (578)
T PRK15490 493 QMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYA-EKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVK 571 (578)
T ss_pred HHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999998877432 334455556678999999999999999999999999
Q ss_pred HHHH
Q 036539 726 MGCM 729 (749)
Q Consensus 726 ly~~ 729 (749)
+|..
T Consensus 572 i~~~ 575 (578)
T PRK15490 572 TIAS 575 (578)
T ss_pred HHHh
Confidence 9864
No 31
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=9.8e-36 Score=328.77 Aligned_cols=287 Identities=20% Similarity=0.196 Sum_probs=213.4
Q ss_pred CCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 365 GGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
..+|||||+|++....+. .+.+..++|++.+.|+..... ....| . ..+..++.+|.+++.|..
T Consensus 83 ~~~~Dvv~~h~~~~~~~~-~~~~~~~~~~i~~~H~~~~~~---~~~~~-----------~--~~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 83 DLDADVVVIHDPQPLALP-LFKKKRGRPWIWRCHIDLSSP---NRRVW-----------D--FLQPYIEDYDAAVFHLPE 145 (372)
T ss_pred cCCCCEEEECCCCchhHH-HhhhcCCCeEEEEeeeecCCC---cHHHH-----------H--HHHHHHHhCCEEeecHHH
Confidence 458999999987753332 223334899999999742110 00111 1 113356789998888844
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCC--CCchHHhhhhccchhhHHhhccccchhh
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYF--PYTEKQRRLTKFHPEIEELLYNKEDNNE 522 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~--p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 522 (749)
.+. .+++ ..++ +||||+|..... +....... ..++
T Consensus 146 ~~~------------------------~~~~--~~~~-vipngvd~~~~~~~~~~~~~~~----------------~~~~ 182 (372)
T cd03792 146 YVP------------------------PQVP--PRKV-IIPPSIDPLSGKNRELSPADIE----------------YILE 182 (372)
T ss_pred hcC------------------------CCCC--CceE-EeCCCCCCCccccCCCCHHHHH----------------HHHH
Confidence 322 1222 3455 999999975322 22111110 1123
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
.+|+ ++++++|+++||+++.||++.|++|++.+.+..++++|+|+|+|+. .+++. .+.++++.+..++.++
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~----~~~~~---~~~~~~~~~~~~~~~~ 253 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGAT----DDPEG---WIVYEEVLEYAEGDPD 253 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCC----CCchh---HHHHHHHHHHhCCCCC
Confidence 4666 6788999999999999999999999999987778999999999965 11111 2234455556677889
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHH
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESS 682 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA 682 (749)
|.|+|... ++.+++..+++ ++|+||+||.+|+||++++|||+||+|||+|+.||..++|.++.+|++++ ++++++
T Consensus 254 v~~~~~~~--~~~~~~~~~~~-~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a 328 (372)
T cd03792 254 IHVLTLPP--VSDLEVNALQR-ASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAA 328 (372)
T ss_pred eEEEecCC--CCHHHHHHHHH-hCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHH
Confidence 99998421 26789999999 59999999999999999999999999999999999999999999999987 467788
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 683 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
.+|.+ ++.|++.+++|+++|++++.++|||+.++++++++|+.
T Consensus 329 ~~i~~----ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 329 VRILY----LLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHH----HHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 88854 55899999999999999998999999999999999864
No 32
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=1.4e-35 Score=322.16 Aligned_cols=347 Identities=19% Similarity=0.227 Sum_probs=258.3
Q ss_pred CcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCcccccc
Q 036539 260 DTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRW 339 (749)
Q Consensus 260 ~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~ 339 (749)
+.||.++++. +|+++|+++||+|. +++...+.. ...+ ..++.+++++......
T Consensus 8 ~~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~------~~~~----~~~~~~~~~~~~~~~~----- 60 (355)
T cd03819 8 ESGGVERGTL--------ELARALVERGHRSL----VASAGGRLV------AELE----AEGSRHIKLPFISKNP----- 60 (355)
T ss_pred ccCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCchH------HHHH----hcCCeEEEccccccch-----
Confidence 3599999999 77777899999998 887542111 1111 1234556665443211
Q ss_pred ccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCccc
Q 036539 340 VSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKY 419 (749)
Q Consensus 340 isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y 419 (749)
+..+ .+...+.+.+. +.+||+||+|+....+.+.++++..++|++.+.|+......
T Consensus 61 ------~~~~-~~~~~l~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-------------- 116 (355)
T cd03819 61 ------LRIL-LNVARLRRLIR---EEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF-------------- 116 (355)
T ss_pred ------hhhH-HHHHHHHHHHH---HcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH--------------
Confidence 1111 12222233333 34899999998877777777888889999999997632110
Q ss_pred ccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchH
Q 036539 420 HFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEK 499 (749)
Q Consensus 420 ~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~ 499 (749)
.....+..+|.++++|....+... ...|++ ..++.+||||+|...|.+....
T Consensus 117 -------~~~~~~~~~~~vi~~s~~~~~~~~-------------------~~~~~~--~~k~~~i~ngi~~~~~~~~~~~ 168 (355)
T cd03819 117 -------RYNAIMARGDRVIAVSNFIADHIR-------------------ENYGVD--PDRIRVIPRGVDLDRFDPGAVP 168 (355)
T ss_pred -------HHHHHHHhcCEEEEeCHHHHHHHH-------------------HhcCCC--hhhEEEecCCccccccCccccc
Confidence 112346789999999987665211 112343 6789999999999888654322
Q ss_pred HhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCc
Q 036539 500 QRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSK 579 (749)
Q Consensus 500 ~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~ 579 (749)
..... ..++.++. ++++++|+++||+++.||++.+++++.++.+..++++|+|+|+++.
T Consensus 169 ~~~~~--------------~~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~----- 227 (355)
T cd03819 169 PERIL--------------ALAREWPL--PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQG----- 227 (355)
T ss_pred hHHHH--------------HHHHHcCC--CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcc-----
Confidence 11100 01233444 5677899999999999999999999999988778899999999865
Q ss_pred chhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECC-CCCCCcHHHHHHHHcCCcEEEcCcc
Q 036539 580 DREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPA-LYEAFGLTVIEAMNCGLPTFATNQG 658 (749)
Q Consensus 580 d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS-~~E~fGLtvlEAMa~GlPVVat~~G 658 (749)
+....+.+.+.+.++++.++|.|+|+ .+++..+++. +|++++|| ..|+||++++|||+||+|||+|+.|
T Consensus 228 ---~~~~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~l~~-ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~ 297 (355)
T cd03819 228 ---RRFYYAELLELIKRLGLQDRVTFVGH------CSDMPAAYAL-ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG 297 (355)
T ss_pred ---cchHHHHHHHHHHHcCCcceEEEcCC------cccHHHHHHh-CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC
Confidence 11234556677888899899999994 4489999995 99999999 7999999999999999999999999
Q ss_pred ccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 036539 659 GPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719 (749)
Q Consensus 659 G~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 719 (749)
|..|++.++.+|++++++|+++++++|...+ ..+++.+.+++++|++.+.++|||+.+
T Consensus 298 ~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~---~~~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 298 GARETVRPGETGLLVPPGDAEALAQALDQIL---SLLPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred CcHHHHhCCCceEEeCCCCHHHHHHHHHHHH---hhCHHHHHHHHHHHHHHHHHhhhhccC
Confidence 9999999999999999999999999996443 368999999999999999999999863
No 33
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=5.3e-35 Score=315.29 Aligned_cols=372 Identities=20% Similarity=0.204 Sum_probs=261.5
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||++++++.+ |..||.+.++. +|++.|+++||+|+ ++|......... ....
T Consensus 1 kIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~~~-- 51 (375)
T cd03821 1 KILHVIPSFD---------PKYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGDPLL------VALN-- 51 (375)
T ss_pred CeEEEcCCCC---------cccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCccch------hhcc--
Confidence 6889987765 45799999999 77777889999999 887653221100 0000
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHcCCCcEEEEe
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG--NLVASVMASKLGITQATIA 397 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~--~lva~lla~~~gvp~v~t~ 397 (749)
+........... ....... ..+.... .........+||+||+|.... ...+...+++.++|++.+.
T Consensus 52 -~~~~~~~~~~~~-------~~~~~~~---~~~~~~~-~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 119 (375)
T cd03821 52 -GVPVKLFSINVA-------YGLNLAR---YLFPPSL-LAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSP 119 (375)
T ss_pred -Cceeeecccchh-------hhhhhhh---hccChhH-HHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEc
Confidence 000000000000 0000000 0000011 111222245899999997433 4555666777899999999
Q ss_pred cCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCC
Q 036539 398 HALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVL 477 (749)
Q Consensus 398 H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~ 477 (749)
|+....... ....+. +....+..+....+.++.++++|....... ..+. .
T Consensus 120 ~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~---------------------~~~~--~ 169 (375)
T cd03821 120 HGMLDPWAL-PHKALK------KRLAWFLFERRLLQAAAAVHATSEQEAAEI---------------------RRLG--L 169 (375)
T ss_pred ccccccccc-ccchhh------hHHHHHHHHHHHHhcCCEEEECCHHHHHHH---------------------HhhC--C
Confidence 986332110 000011 111112234556788999999986655411 1111 2
Q ss_pred CCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHh
Q 036539 478 DPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKN 557 (749)
Q Consensus 478 ~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l 557 (749)
..++.+||||+|.+.+.+......+ +.++. +.++++|+++||+.+.||++.+++++.++
T Consensus 170 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l 228 (375)
T cd03821 170 KAPIAVIPNGVDIPPFAALPSRGRR-------------------RKFPI--LPDKRIILFLGRLHPKKGLDLLIEAFAKL 228 (375)
T ss_pred cccEEEcCCCcChhccCcchhhhhh-------------------hhccC--CCCCcEEEEEeCcchhcCHHHHHHHHHHh
Confidence 6689999999999888664432211 22333 56788999999999999999999999999
Q ss_pred HccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCC
Q 036539 558 KRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEA 637 (749)
Q Consensus 558 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~ 637 (749)
.+..++++|+++|.+.. .+...+..+++++++.++|.|+| .++.+++..+++. +|++|+||..|+
T Consensus 229 ~~~~~~~~l~i~G~~~~----------~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~ 293 (375)
T cd03821 229 AERFPDWHLVIAGPDEG----------GYRAELKQIAAALGLEDRVTFTG----MLYGEDKAAALAD-ADLFVLPSHSEN 293 (375)
T ss_pred hhhcCCeEEEEECCCCc----------chHHHHHHHHHhcCccceEEEcC----CCChHHHHHHHhh-CCEEEeccccCC
Confidence 88888999999998765 22345556678899999999999 7778899999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWK 717 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 717 (749)
||++++|||+||+|||+|+.||..|++.+ .+|++++. +.++++++|.+ +.+|++.++++++++++.+.++|||+
T Consensus 294 ~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~----l~~~~~~~~~~~~~~~~~~~~~~s~~ 367 (375)
T cd03821 294 FGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRR----ALELPQRLKAMGENGRALVEERFSWT 367 (375)
T ss_pred CCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHhcCHH
Confidence 99999999999999999999999999988 78998865 55999999955 55899999999999999999999999
Q ss_pred HHHHHHH
Q 036539 718 IYANKML 724 (749)
Q Consensus 718 ~~a~~ll 724 (749)
.++++++
T Consensus 368 ~~~~~~~ 374 (375)
T cd03821 368 AIAQQLL 374 (375)
T ss_pred HHHHHhh
Confidence 9999886
No 34
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=2.5e-34 Score=311.68 Aligned_cols=272 Identities=22% Similarity=0.273 Sum_probs=224.0
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCH
Q 036539 365 GGKPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTF 443 (749)
Q Consensus 365 ~~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~ 443 (749)
..+||+||+|+... ..++.+.++..++|++.+.|+..... .... ......++.+|.++++|.
T Consensus 77 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---------------~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 77 RLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFR--SPDA---------------IDLDEKLARADFVVAISE 139 (355)
T ss_pred hcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccc--cCch---------------HHHHHHHhhCCEEEECCH
Confidence 45899999998754 45555555566899999999653211 0000 123456889999999998
Q ss_pred HHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhh
Q 036539 444 QEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEH 523 (749)
Q Consensus 444 ~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 523 (749)
...+..... .|.. ..++.++|||+|.+.+.+....
T Consensus 140 ~~~~~l~~~-------------------~~~~--~~~~~vi~~~~d~~~~~~~~~~------------------------ 174 (355)
T cd03799 140 YNRQQLIRL-------------------LGCD--PDKIHVVHCGVDLERFPPRPPP------------------------ 174 (355)
T ss_pred HHHHHHHHh-------------------cCCC--cccEEEEeCCcCHHHcCCcccc------------------------
Confidence 877622111 1333 6789999999998877544300
Q ss_pred cCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcE
Q 036539 524 IGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM 603 (749)
Q Consensus 524 ~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 603 (749)
...+++.|+++||+.+.||++.+++++.++.+..++++|+++|.++. .+.+.+.++++++.++|
T Consensus 175 ----~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v 238 (355)
T cd03799 175 ----PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL------------RDELEALIAELGLEDRV 238 (355)
T ss_pred ----ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc------------HHHHHHHHHHcCCCCeE
Confidence 03456789999999999999999999999988778999999999977 56788889999999999
Q ss_pred EEecCccCcCChHHHHHHHHccCcEEEECCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCC
Q 036539 604 RWIAAQSDRLRNGELYRCIADTKGAFVQPALY------EAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYN 677 (749)
Q Consensus 604 ~flG~~~~~~~~~el~~~la~aadvfV~PS~~------E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d 677 (749)
+|.| .++.+++..+++. +|++++||.. |+||++++|||+||+|||+++.|+..|++.++.+|++++++|
T Consensus 239 ~~~g----~~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~ 313 (355)
T cd03799 239 TLLG----AKSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGD 313 (355)
T ss_pred EECC----cCChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCC
Confidence 9999 7778899999995 9999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 036539 678 GDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKM 723 (749)
Q Consensus 678 ~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~l 723 (749)
+++++++|.+++ +|++.+.+|+++|++++.++|||+..++++
T Consensus 314 ~~~l~~~i~~~~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l 355 (355)
T cd03799 314 PEALADAIERLL----DDPELRREMGEAGRARVEEEFDIRKQAARL 355 (355)
T ss_pred HHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHHHhhcC
Confidence 999999996654 799999999999999999999999998763
No 35
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=2.5e-34 Score=309.96 Aligned_cols=333 Identities=17% Similarity=0.163 Sum_probs=238.0
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
|||+++++..+| .+.|..||.++++. +|++.|.++||+|+ +++........ ..
T Consensus 1 MkI~~i~~~~~~-----~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~~----- 53 (335)
T cd03802 1 MRIALVAPPREP-----VPPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKTAA-----PL----- 53 (335)
T ss_pred CeEEEEcCCccc-----CCCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCccc-----ce-----
Confidence 799999987665 23367899999999 67777789999999 88865322100 00
Q ss_pred ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEec
Q 036539 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAH 398 (749)
Q Consensus 319 ~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H 398 (749)
......+.. ................+. .+.+ ..+|||||+|.+..... +++..++|++++.|
T Consensus 54 ---~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~~~--~~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 54 ---VPVVPEPLR---------LDAPGRDRAEAEALALAE-RALA--AGDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred ---eeccCCCcc---------cccchhhHhhHHHHHHHH-HHHh--cCCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 000000000 000000000111111222 2222 45899999998887554 56778999999999
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
+...... .+ ........+.++++|...... + .. .
T Consensus 116 ~~~~~~~-----~~---------------~~~~~~~~~~~~~~s~~~~~~-------~-----------------~~--~ 149 (335)
T cd03802 116 GPPDPEL-----LK---------------LYYAARPDVPFVSISDAQRRP-------W-----------------PP--L 149 (335)
T ss_pred CCCCccc-----ch---------------HHHhhCcCCeEEEecHHHHhh-------c-----------------cc--c
Confidence 7632110 00 122456778888888766541 0 01 1
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.+||||+|.+.|.+. +.+++.|+|+||+.+.||++.+++++.+
T Consensus 150 ~~~~vi~ngvd~~~~~~~--------------------------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~-- 195 (335)
T cd03802 150 PWVATVHNGIDLDDYPFR--------------------------------GPKGDYLLFLGRISPEKGPHLAIRAARR-- 195 (335)
T ss_pred cccEEecCCcChhhCCCC--------------------------------CCCCCEEEEEEeeccccCHHHHHHHHHh--
Confidence 578899999999877541 2345689999999999999999999865
Q ss_pred ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcC-CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC-CC
Q 036539 559 RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQ-LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL-YE 636 (749)
Q Consensus 559 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~-L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~-~E 636 (749)
.+++|+|+|++.. .+.+...+.+.. +.++|.|+| .++..++..+++. +|++|+||. .|
T Consensus 196 ---~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~G----~~~~~~~~~~~~~-~d~~v~ps~~~E 255 (335)
T cd03802 196 ---AGIPLKLAGPVSD------------PDYFYREIAPELLDGPDIEYLG----EVGGAEKAELLGN-ARALLFPILWEE 255 (335)
T ss_pred ---cCCeEEEEeCCCC------------HHHHHHHHHHhcccCCcEEEeC----CCCHHHHHHHHHh-CcEEEeCCcccC
Confidence 3689999999976 233444444443 568999999 7778899999995 999999998 59
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCH
Q 036539 637 AFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTW 716 (749)
Q Consensus 637 ~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw 716 (749)
+||++++|||+||+|||+|+.||..|++.++.+|+++++ +++++++|.++. ..+ .+++++++.++|||
T Consensus 256 ~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~----~~~------~~~~~~~~~~~~s~ 323 (335)
T cd03802 256 PFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARAD----RLD------RAACRRRAERRFSA 323 (335)
T ss_pred CcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHh----ccH------HHHHHHHHHHhCCH
Confidence 999999999999999999999999999999999999986 999999996543 332 35678888899999
Q ss_pred HHHHHHHHHHHH
Q 036539 717 KIYANKMLNMGC 728 (749)
Q Consensus 717 ~~~a~~ll~ly~ 728 (749)
+.++++|+++|+
T Consensus 324 ~~~~~~~~~~y~ 335 (335)
T cd03802 324 ARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHHhC
Confidence 999999999884
No 36
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.2e-34 Score=311.07 Aligned_cols=354 Identities=20% Similarity=0.204 Sum_probs=255.7
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+++++..+ |+.||.+.++. +|+++|.++||+|+ |++........ ....
T Consensus 1 kil~i~~~~~---------p~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~------~~~~--- 50 (357)
T cd03795 1 RVLHVGKFYP---------PDRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPKGR------DEER--- 50 (357)
T ss_pred CeeEecCCCC---------CCCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCcch------hhhc---
Confidence 6899986665 45699999999 77777899999999 88765322211 1111
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecC
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHA 399 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~ 399 (749)
.+..+.+++.... ....+... .....+. ....+||+||+|++.............++|.+.+.|+
T Consensus 51 ~~~~~~~~~~~~~----------~~~~~~~~----~~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLN----------VASTPFSP----SFFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeecccc----------cccccccH----HHHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 1234455443211 00111111 1111111 2255899999998765333333333468899999996
Q ss_pred CcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCC
Q 036539 400 LEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479 (749)
Q Consensus 400 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ 479 (749)
..... ... +.+.. ..+...++.+|.|+++|......... +..+..
T Consensus 116 ~~~~~----~~~-------~~~~~--~~~~~~~~~~d~vi~~s~~~~~~~~~----------------------~~~~~~ 160 (357)
T cd03795 116 DIVKQ----KLL-------LKLYR--PLQRRFLRRADAIVATSPNYAETSPV----------------------LRRFRD 160 (357)
T ss_pred hhhcc----chh-------hhhhh--HHHHHHHHhcCEEEeCcHHHHHHHHH----------------------hcCCcc
Confidence 42111 000 01111 12345788999999999876541110 111146
Q ss_pred ceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHc
Q 036539 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKR 559 (749)
Q Consensus 480 ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~ 559 (749)
++.+||||+|.+.+.+...... ..... +.++++|+++||+.+.||++.+++|+.++.
T Consensus 161 ~~~~i~~gi~~~~~~~~~~~~~--------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 161 KVRVIPLGLDPARYPRPDALEE--------------------AIWRR--AAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ceEEecCCCChhhcCCcchhhh--------------------HhhcC--CCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 8899999999988765433211 00111 456789999999999999999999999986
Q ss_pred cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCC
Q 036539 560 LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEA 637 (749)
Q Consensus 560 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~ 637 (749)
+++|+|+|+|+. ...+.+.+++.++..+|.|+| .++.+++..+++. ||++++||. .|+
T Consensus 218 ---~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~V~~~g----~v~~~~~~~~~~~-ad~~i~ps~~~~e~ 277 (357)
T cd03795 218 ---DAPLVIVGEGPL------------EAELEALAAALGLLDRVRFLG----RLDDEEKAALLAA-CDVFVFPSVERSEA 277 (357)
T ss_pred ---CcEEEEEeCChh------------HHHHHHHHHhcCCcceEEEcC----CCCHHHHHHHHHh-CCEEEeCCcccccc
Confidence 699999999876 567888888899999999999 7778899999995 999999996 599
Q ss_pred CcHHHHHHHHcCCcEEEcCcccccccccc-CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVD-GVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTW 716 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG~~EiI~d-g~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw 716 (749)
||++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.++ .+|++.+++|+++|++.+.++|||
T Consensus 278 ~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l----~~~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 278 FGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRL----LEDPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred cchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHH----HHCHHHHHHHHHHHHHHHHHhcch
Confidence 99999999999999999999999999886 8999999999999999999654 489999999999999999999999
Q ss_pred HHHH
Q 036539 717 KIYA 720 (749)
Q Consensus 717 ~~~a 720 (749)
+.++
T Consensus 354 ~~~~ 357 (357)
T cd03795 354 DRMV 357 (357)
T ss_pred HhhC
Confidence 9864
No 37
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=6.2e-34 Score=308.06 Aligned_cols=387 Identities=18% Similarity=0.199 Sum_probs=272.1
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+++|.+.+| ..||.+.++. .++++|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~~---------~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFPP---------ELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccCC---------ccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 68999977764 3488999999 67777889999999 8886533221110000 001122
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHcCCCcEEEEe
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG--NLVASVMASKLGITQATIA 397 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~--~lva~lla~~~gvp~v~t~ 397 (749)
.++.+.+++...... ..++.+ +..+ ..|.......+.. ...+||+||++.+.. ...+..+++..++|++.++
T Consensus 58 ~~~~~~~~~~~~~~~--~~~~~~--~~~~-~~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKK--NGLLKR--LLNY-LSFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCc--cchHHH--HHhh-hHHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 356777766543211 000000 0111 1233333333331 256899999997432 4555666677799999999
Q ss_pred cCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCC
Q 036539 398 HALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVL 477 (749)
Q Consensus 398 H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~ 477 (749)
|+............... ...+. .....++..++.+|.++++|....+... ..+++
T Consensus 132 h~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~d~vi~~s~~~~~~~~--------------------~~~~~-- 186 (394)
T cd03794 132 RDLWPESAVALGLLKNG-SLLYR--LLRKLERLIYRRADAIVVISPGMREYLV--------------------RRGVP-- 186 (394)
T ss_pred hhhcchhHHHccCcccc-chHHH--HHHHHHHHHHhcCCEEEEECHHHHHHHH--------------------hcCCC--
Confidence 98743221111000000 00001 1112355678899999999988776211 12333
Q ss_pred CCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHh
Q 036539 478 DPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKN 557 (749)
Q Consensus 478 ~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l 557 (749)
..++.++|||+|...+.+......+ ..... +.++++|+++|++.+.||++.+++++.++
T Consensus 187 ~~~~~~i~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~l 245 (394)
T cd03794 187 PEKISVIPNGVDLELFKPPPADESL-------------------RKELG--LDDKFVVLYAGNIGRAQGLDTLLEAAALL 245 (394)
T ss_pred cCceEEcCCCCCHHHcCCccchhhh-------------------hhccC--CCCcEEEEEecCcccccCHHHHHHHHHHH
Confidence 6789999999998877655432211 11121 45678999999999999999999999999
Q ss_pred HccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCC
Q 036539 558 KRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEA 637 (749)
Q Consensus 558 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~ 637 (749)
.+. ++++|+|+|++.. .+.+.+.+...++ ++|.++| .++.+++..+|+. +|++++||..|+
T Consensus 246 ~~~-~~~~l~i~G~~~~------------~~~~~~~~~~~~~-~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~ 306 (394)
T cd03794 246 KDR-PDIRFLIVGDGPE------------KEELKELAKALGL-DNVTFLG----RVPKEELPELLAA-ADVGLVPLKPGP 306 (394)
T ss_pred hhc-CCeEEEEeCCccc------------HHHHHHHHHHcCC-CcEEEeC----CCChHHHHHHHHh-hCeeEEeccCcc
Confidence 876 7899999999876 5566666666665 6799999 7778999999995 999999999887
Q ss_pred C-----cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 036539 638 F-----GLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINE 712 (749)
Q Consensus 638 f-----GLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~ 712 (749)
+ |++++|||+||+|||+|+.+|..+++.++.+|++++++|+++++++|.++ ..|++.+++|++++++.+.+
T Consensus 307 ~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~----~~~~~~~~~~~~~~~~~~~~ 382 (394)
T cd03794 307 AFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILEL----LDDPEERAEMGENGRRYVEE 382 (394)
T ss_pred cccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHH----HhChHHHHHHHHHHHHHHHH
Confidence 5 88899999999999999999999999998999999999999999999654 48999999999999999988
Q ss_pred hCCHHHHHHHHH
Q 036539 713 CYTWKIYANKML 724 (749)
Q Consensus 713 ~ysw~~~a~~ll 724 (749)
+|||+.++++++
T Consensus 383 ~~s~~~~~~~~~ 394 (394)
T cd03794 383 KFSREKLAERLL 394 (394)
T ss_pred hhcHHHHHHhcC
Confidence 999999998863
No 38
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=6.7e-34 Score=307.34 Aligned_cols=363 Identities=20% Similarity=0.272 Sum_probs=259.3
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||++++.... |..||.+.++. .|+++|+++||+|+ ++|......... . .
T Consensus 1 kIl~i~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~--~---~----- 49 (364)
T cd03814 1 RIAIVTDTFL---------PQVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESEG--P---A----- 49 (364)
T ss_pred CeEEEecccC---------ccccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhccC--C---C-----
Confidence 6899986665 34589999999 77777899999999 888763322110 0 0
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEec
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG-NLVASVMASKLGITQATIAH 398 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H 398 (749)
....+...+...... . +..+ .......+.+. ..+||+||++.... +..+..++++.++|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~-----~-~~~~-----~~~~~~~~~~~---~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPE-----I-RLAL-----PPRRRVRRLLD---AFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccc-----e-Eecc-----cchhhHHHHHH---hcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 112222222111100 0 0000 01111222222 34899999986654 46667778889999999999
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
+......... .... ...+ .....+...+.+|.+++.|....+. + .... .
T Consensus 116 ~~~~~~~~~~---~~~~--~~~~--~~~~~~~~~~~~d~i~~~s~~~~~~-------~---------------~~~~--~ 164 (364)
T cd03814 116 TDFPEYLRYY---GLGP--LSWL--AWAYLRWFHNRADRVLVPSPSLADE-------L---------------RARG--F 164 (364)
T ss_pred cChHHHhhhc---ccch--HhHh--hHHHHHHHHHhCCEEEeCCHHHHHH-------H---------------hccC--C
Confidence 7532110000 0000 0000 0122344678899999999876551 0 0111 4
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.+++||+|.+.|.+........ +.++ +.++++|+++||+.+.||++.+++++.++.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~~~~~------------------~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~ 223 (364)
T cd03814 165 RRVRLWPRGVDTELFHPRRRDEALR------------------ARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLR 223 (364)
T ss_pred CceeecCCCccccccCcccccHHHH------------------HHhC---CCCCeEEEEEeccccccCHHHHHHHHHHhh
Confidence 5789999999998887654322111 1222 345778999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCC
Q 036539 559 RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAF 638 (749)
Q Consensus 559 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~f 638 (749)
.. ++++|+|+|+++. .+.++ +...+|.|+| .++.+++..+++. +|++++||..|+|
T Consensus 224 ~~-~~~~l~i~G~~~~------------~~~~~------~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~~s~~e~~ 279 (364)
T cd03814 224 RR-PPVRLVIVGDGPA------------RARLE------ARYPNVHFLG----FLDGEELAAAYAS-ADVFVFPSRTETF 279 (364)
T ss_pred hc-CCceEEEEeCCch------------HHHHh------ccCCcEEEEe----ccCHHHHHHHHHh-CCEEEECcccccC
Confidence 76 8899999999876 22332 4567899999 7778999999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 036539 639 GLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKI 718 (749)
Q Consensus 639 GLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~ 718 (749)
|++++|||+||+|||+++.|+..|++.++.+|+++++.|.++++++|.+ +..||+.+++|++++++.+ ++|||+.
T Consensus 280 ~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~----l~~~~~~~~~~~~~~~~~~-~~~~~~~ 354 (364)
T cd03814 280 GLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAA----LLADPELRRRMAARARAEA-ERRSWEA 354 (364)
T ss_pred CcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHH----HHcCHHHHHHHHHHHHHHH-hhcCHHH
Confidence 9999999999999999999999999999999999999999999999965 4489999999999999998 8899999
Q ss_pred HHHHHHHHHH
Q 036539 719 YANKMLNMGC 728 (749)
Q Consensus 719 ~a~~ll~ly~ 728 (749)
++++++++|+
T Consensus 355 ~~~~~~~~~~ 364 (364)
T cd03814 355 FLDNLLEAYR 364 (364)
T ss_pred HHHHHHHhhC
Confidence 9999999873
No 39
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=4e-35 Score=334.85 Aligned_cols=295 Identities=16% Similarity=0.222 Sum_probs=232.7
Q ss_pred CCCceEEEEcCCC-chHHHHHHHHcCCCcEEEEecCCcccccC--CCcchhhhc-CcccccchhhhHHHHHhhhCCEEEe
Q 036539 365 GGKPDLIIGNYSD-GNLVASVMASKLGITQATIAHALEKTKYE--DSDVKWKEL-DPKYHFSCQFIADTIAMNATDFIIA 440 (749)
Q Consensus 365 ~~~pDIIh~h~~~-~~lva~lla~~~gvp~v~t~H~l~~~k~~--~s~~~~~~~-~~~y~f~~~~~~e~~a~~~aD~IIt 440 (749)
..++||||+|... .++++.+++++.|+|++.|.|+....... .....|... ............++.+++.||.|++
T Consensus 171 ~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~ 250 (475)
T cd03813 171 LPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITT 250 (475)
T ss_pred CCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEe
Confidence 3578999999754 46778888899999999999986321100 000001000 0000000011235667899999999
Q ss_pred CCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccch
Q 036539 441 STFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDN 520 (749)
Q Consensus 441 ~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 520 (749)
+|....+ +....|++ ..|+.|||||+|.+.|.+....
T Consensus 251 ~s~~~~~--------------------~~~~~g~~--~~ki~vIpNgid~~~f~~~~~~--------------------- 287 (475)
T cd03813 251 LYEGNRE--------------------RQIEDGAD--PEKIRVIPNGIDPERFAPARRA--------------------- 287 (475)
T ss_pred cCHHHHH--------------------HHHHcCCC--HHHeEEeCCCcCHHHcCCcccc---------------------
Confidence 9987654 11223444 6799999999999888664321
Q ss_pred hhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC
Q 036539 521 NEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600 (749)
Q Consensus 521 ~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 600 (749)
+ .+.++++|+++||+.+.||++.+++|+..+.+..++++|+|+|+++. +..+.++++++++++++.
T Consensus 288 ----~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~--------~~~~~~e~~~li~~l~l~ 353 (475)
T cd03813 288 ----R--PEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDE--------DPEYAEECRELVESLGLE 353 (475)
T ss_pred ----c--cCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCc--------ChHHHHHHHHHHHHhCCC
Confidence 0 03567899999999999999999999999988889999999999853 124567888999999999
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc------CceEEEEC
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD------GVSGFHID 674 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d------g~~G~lv~ 674 (749)
++|+|+| ..++..+|+ ++|++|+||..|+||++++|||+||+|||+|+.||..|++.+ |.+|++++
T Consensus 354 ~~V~f~G-------~~~v~~~l~-~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~ 425 (475)
T cd03813 354 DNVKFTG-------FQNVKEYLP-KLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVP 425 (475)
T ss_pred CeEEEcC-------CccHHHHHH-hCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEEC
Confidence 9999999 236788888 499999999999999999999999999999999999999988 67999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 675 PYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 675 p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+.|+++++++|.+ +++|++.+++|+++|++++.+.|+|+.++++|.++|+
T Consensus 426 ~~d~~~la~ai~~----ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 426 PADPEALARAILR----LLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred CCCHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999965 4589999999999999999999999999999999984
No 40
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=1.1e-33 Score=307.35 Aligned_cols=281 Identities=18% Similarity=0.247 Sum_probs=218.9
Q ss_pred CCceEEEEcCCCchHHHHHHHHc-CCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 366 GKPDLIIGNYSDGNLVASVMASK-LGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~~-~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
.+||+||+|....+.++.+++.. .++|++.+.|+..... .. .. .........++.++++|..
T Consensus 78 ~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~------~~------~~-----~~~~~~~~~~~~~~~~s~~ 140 (360)
T cd04951 78 FKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGG------RL------RM-----LAYRLTDFLSDLTTNVSKE 140 (360)
T ss_pred cCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchh------HH------HH-----HHHHHHhhccCceEEEcHH
Confidence 48999999988776666665554 3678899999763210 00 00 1112233456777777766
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
..+... ...+++ ..++.+||||+|...|.+....... .++.+
T Consensus 141 ~~~~~~-------------------~~~~~~--~~~~~~i~ng~~~~~~~~~~~~~~~-----------------~~~~~ 182 (360)
T cd04951 141 ALDYFI-------------------ASKAFN--ANKSFVVYNGIDTDRFRKDPARRLK-----------------IRNAL 182 (360)
T ss_pred HHHHHH-------------------hccCCC--cccEEEEccccchhhcCcchHHHHH-----------------HHHHc
Confidence 554111 111223 5689999999998887654432221 12345
Q ss_pred CccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE
Q 036539 525 GYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR 604 (749)
Q Consensus 525 g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 604 (749)
++ ++++++++++||+.+.||++.+++++.++.+..++++|+|+|+|+. .+.+.+.++++++.++|.
T Consensus 183 ~~--~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~ 248 (360)
T cd04951 183 GV--KNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPL------------RATLERLIKALGLSNRVK 248 (360)
T ss_pred Cc--CCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCc------------HHHHHHHHHhcCCCCcEE
Confidence 55 5678899999999999999999999999988778999999999987 567888888899989999
Q ss_pred EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHH
Q 036539 605 WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDK 684 (749)
Q Consensus 605 flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~a 684 (749)
|+|.+ +++..+|+. +|++++||..|+||++++|||+||+|||+++.|+..|++.+ +|+.++++|+++++++
T Consensus 249 ~~g~~------~~~~~~~~~-ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~ 319 (360)
T cd04951 249 LLGLR------DDIAAYYNA-ADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANK 319 (360)
T ss_pred Eeccc------ccHHHHHHh-hceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHH
Confidence 99943 368888985 99999999999999999999999999999999999999977 8999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 685 IADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 685 I~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
|.++++ .+++.++.++++ ++.+.++|||+.++++++++|+
T Consensus 320 i~~ll~---~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 320 IDEILK---MSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHh---CCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence 976542 577777778777 8888899999999999999985
No 41
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=1.5e-33 Score=301.18 Aligned_cols=374 Identities=23% Similarity=0.306 Sum_probs=271.7
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+++++...| ..||...++. .|++.|.+.||+|. +++............ ..
T Consensus 1 kI~ii~~~~~~---------~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~~~~------~~- 52 (374)
T cd03801 1 KILLVTPEYPP---------SVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDEEEV------GG- 52 (374)
T ss_pred CeeEEecccCC---------ccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCceeee------cC-
Confidence 68999876653 3589999999 67777888999999 888764332111000 00
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecC
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHA 399 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~ 399 (749)
.......... ..........+....... .. ..+||+||++.+.........++..++|++.+.|+
T Consensus 53 --~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~-~~--~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 53 --IVVVRPPPLL----------RVRRLLLLLLLALRLRRL-LR--RERFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred --cceecCCccc----------ccchhHHHHHHHHHHHHH-hh--hcCCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 0000000000 000000111122222222 22 34899999999887655557778889999999998
Q ss_pred CcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCC
Q 036539 400 LEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479 (749)
Q Consensus 400 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ 479 (749)
......... ...........+...++.+|.+++.|....+...+. .+.. ..
T Consensus 118 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~~--~~ 168 (374)
T cd03801 118 LEFGRPGNE--------LGLLLKLARALERRALRRADRIIAVSEATREELREL-------------------GGVP--PE 168 (374)
T ss_pred chhhccccc--------hhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-------------------CCCC--CC
Confidence 744321111 000011112335567889999999998776622111 1111 35
Q ss_pred ceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHc
Q 036539 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKR 559 (749)
Q Consensus 480 ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~ 559 (749)
++.++|||+|...+.+.. ...+ ..... ..+++.|+++|++.+.||++.+++++..+.+
T Consensus 169 ~~~~i~~~~~~~~~~~~~-~~~~-------------------~~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~ 226 (374)
T cd03801 169 KITVIPNGVDTERFRPAP-RAAR-------------------RRLGI--PEDEPVILFVGRLVPRKGVDLLLEALAKLRK 226 (374)
T ss_pred cEEEecCcccccccCccc-hHHH-------------------hhcCC--cCCCeEEEEecchhhhcCHHHHHHHHHHHhh
Confidence 899999999998876543 1100 01111 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCc
Q 036539 560 LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFG 639 (749)
Q Consensus 560 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fG 639 (749)
..++++|+++|++.. .+.+.+.+++.+...+|.++| .++.+++..+++. +|++++|+..|++|
T Consensus 227 ~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~ 289 (374)
T cd03801 227 EYPDVRLVIVGDGPL------------REELEALAAELGLGDRVTFLG----FVPDEDLPALYAA-ADVFVLPSLYEGFG 289 (374)
T ss_pred hcCCeEEEEEeCcHH------------HHHHHHHHHHhCCCcceEEEe----ccChhhHHHHHHh-cCEEEecchhcccc
Confidence 778999999997755 667778888889999999999 7778899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 036539 640 LTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719 (749)
Q Consensus 640 LtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 719 (749)
++++|||+||+|||+++.++..|++.++.+|+++++.|+++++++|.+ +..|++.+.++++++++.+.++|||+.+
T Consensus 290 ~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (374)
T cd03801 290 LVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILR----LLDDPELRRRLGEAARERVAERFSWDRV 365 (374)
T ss_pred chHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHH----HHcChHHHHHHHHHHHHHHHHhcCHHHH
Confidence 999999999999999999999999998999999999999999999965 4589999999999999999999999999
Q ss_pred HHHHHHHHH
Q 036539 720 ANKMLNMGC 728 (749)
Q Consensus 720 a~~ll~ly~ 728 (749)
++++.++|+
T Consensus 366 ~~~~~~~~~ 374 (374)
T cd03801 366 AARTEEVYY 374 (374)
T ss_pred HHHHHHhhC
Confidence 999999763
No 42
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=9.9e-34 Score=304.23 Aligned_cols=363 Identities=18% Similarity=0.196 Sum_probs=264.2
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+++++-.. .||.+.++. .|++.|++.|++|. +++....... ..... .
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~~~----~~~~~----~ 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRGEL----GEELE----E 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcchhh----hHHHH----h
Confidence 5777765443 389999999 77777888999998 7775422211 11111 1
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHc-CCCcEEEEec
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASK-LGITQATIAH 398 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~-~gvp~v~t~H 398 (749)
.++.+..++.... +.. ..+...+.+.+. +.+||+||++.......+.+.++. .+.+.+.+.|
T Consensus 50 ~~i~v~~~~~~~~-------------~~~-~~~~~~~~~~~~---~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPG-------------RPD-PGALLRLYKLIR---RLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEecccc-------------ccc-HHHHHHHHHHHH---hhCCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 2455555543321 011 112222333333 348999999987776666666665 6889999999
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
....... .|. .. ..........+.+|.++++|....+.. ...|++ .
T Consensus 113 ~~~~~~~-----~~~--~~-----~~~~~~~~~~~~~~~~i~~s~~~~~~~--------------------~~~~~~--~ 158 (365)
T cd03807 113 HSDLDLG-----KKS--TR-----LVARLRRLLSSFIPLIVANSAAAAEYH--------------------QAIGYP--P 158 (365)
T ss_pred CCccccc-----chh--Hh-----HHHHHHHHhccccCeEEeccHHHHHHH--------------------HHcCCC--h
Confidence 8643211 011 00 011223445677899899998766511 111343 6
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.++|||+|...+.+........ ++.+++ ++++++|+++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 159 KKIVVIPNGVDTERFSPDLDARARL-----------------REELGL--PEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred hheeEeCCCcCHHhcCCcccchHHH-----------------HHhcCC--CCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 7899999999988776554322211 133555 567789999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHH-HcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCC
Q 036539 559 RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALME-KYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEA 637 (749)
Q Consensus 559 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~-~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~ 637 (749)
+..++++|+|+|.+.. ......... ++++.++|.|+|.+ +++..+++. +|++++||.+|+
T Consensus 220 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~ps~~e~ 280 (365)
T cd03807 220 KKFPNARLLLVGDGPD------------RANLELLALKELGLEDKVILLGER------SDVPALLNA-LDVFVLSSLSEG 280 (365)
T ss_pred HhCCCeEEEEecCCcc------------hhHHHHHHHHhcCCCceEEEcccc------ccHHHHHHh-CCEEEeCCcccc
Confidence 8788999999999876 334444454 78888999999932 368889985 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWK 717 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 717 (749)
||++++|||+||+|||+++.||..|++.+ +|++++++|+++++++|.+++ +|++.+.++++++++++.++|||+
T Consensus 281 ~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 354 (365)
T cd03807 281 FPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALL----ADPALRQALGEAARERIEENFSIE 354 (365)
T ss_pred CCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999977 899999999999999996544 799999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 036539 718 IYANKMLNMGC 728 (749)
Q Consensus 718 ~~a~~ll~ly~ 728 (749)
.++++++++|+
T Consensus 355 ~~~~~~~~~y~ 365 (365)
T cd03807 355 AMVEAYEELYR 365 (365)
T ss_pred HHHHHHHHHhC
Confidence 99999999874
No 43
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=2.1e-33 Score=304.22 Aligned_cols=358 Identities=17% Similarity=0.179 Sum_probs=250.3
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||++|++.. |..||.+.++. .|+++|+++||+|+ +++........... ...
T Consensus 1 kI~~v~~~~----------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~-------~~~ 51 (366)
T cd03822 1 RIALVSPYP----------PRKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYPSLLYG-------GEQ 51 (366)
T ss_pred CeEEecCCC----------CCCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccCcccCC-------Ccc
Confidence 689998643 34699999999 77777899999998 77654322110000 000
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc---hHHHH---HHHHcCCCcE
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG---NLVAS---VMASKLGITQ 393 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~---~lva~---lla~~~gvp~ 393 (749)
...... .. .. ......+.+.+. ..+||+||++.+.+ ...+. ...+..++|+
T Consensus 52 ~~~~~~-~~--------------~~-----~~~~~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVI-VL--------------DN-----PLDYRRAARAIR---LSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeee-ec--------------CC-----chhHHHHHHHHh---hcCCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 000000 00 00 001111222222 34899999887432 12222 2223589999
Q ss_pred EEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhcc
Q 036539 394 ATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKG 473 (749)
Q Consensus 394 v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~G 473 (749)
+.+.|+... . .. . ..........++.+|.|+++|...... + +
T Consensus 109 i~~~h~~~~-~---~~-~----------~~~~~~~~~~~~~~d~ii~~s~~~~~~-------~-----------~----- 150 (366)
T cd03822 109 VVTLHTVLL-H---EP-R----------PGDRALLRLLLRRADAVIVMSSELLRA-------L-----------L----- 150 (366)
T ss_pred EEEEecCCc-c---cc-c----------hhhhHHHHHHHhcCCEEEEeeHHHHHH-------H-----------H-----
Confidence 999998610 0 00 0 001122345678999999997333320 1 0
Q ss_pred CCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHH
Q 036539 474 IDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEW 553 (749)
Q Consensus 474 i~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA 553 (749)
......++.+||||+|...+.+..... ..+. +.++++|+++||+.+.||++.+++|
T Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~~~~~~----------------------~~~~--~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 151 LRAYPEKIAVIPHGVPDPPAEPPESLK----------------------ALGG--LDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred hhcCCCcEEEeCCCCcCcccCCchhhH----------------------hhcC--CCCCeEEEEEeeccCCCCHHHHHHH
Confidence 011146899999999987665432211 0111 4567899999999999999999999
Q ss_pred HHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECC
Q 036539 554 YGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPA 633 (749)
Q Consensus 554 ~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS 633 (749)
+.++.+..++++|+|+|++.... ........++++++++.++|.|+|. .++.+++..+|+. +|++++||
T Consensus 207 ~~~~~~~~~~~~l~i~G~~~~~~-------~~~~~~~~~~i~~~~~~~~v~~~~~---~~~~~~~~~~~~~-ad~~v~ps 275 (366)
T cd03822 207 LPLLVAKHPDVRLLVAGETHPDL-------ERYRGEAYALAERLGLADRVIFINR---YLPDEELPELFSA-ADVVVLPY 275 (366)
T ss_pred HHHHHhhCCCeEEEEeccCccch-------hhhhhhhHhHHHhcCCCCcEEEecC---cCCHHHHHHHHhh-cCEEEecc
Confidence 99998888899999999986510 0000111145788899999999982 2778999999995 99999999
Q ss_pred CCC--CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 036539 634 LYE--AFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRIN 711 (749)
Q Consensus 634 ~~E--~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~ 711 (749)
.+| +||++++|||+||+|||+|+.|| .+.+.++.+|++++++|+++++++|.+ +.+|++.+.+|++++++.+.
T Consensus 276 ~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~----l~~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 276 RSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRR----LLADPELAQALRARAREYAR 350 (366)
T ss_pred cccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHH----HHcChHHHHHHHHHHHHHHh
Confidence 999 99999999999999999999999 777778889999999999999999965 45899999999999999996
Q ss_pred HhCCHHHHHHHHHHHHH
Q 036539 712 ECYTWKIYANKMLNMGC 728 (749)
Q Consensus 712 ~~ysw~~~a~~ll~ly~ 728 (749)
+ |||+.+++++.++|+
T Consensus 351 ~-~s~~~~~~~~~~~~~ 366 (366)
T cd03822 351 A-MSWERVAERYLRLLA 366 (366)
T ss_pred h-CCHHHHHHHHHHHhC
Confidence 5 999999999999874
No 44
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=3.3e-34 Score=315.47 Aligned_cols=268 Identities=20% Similarity=0.252 Sum_probs=203.3
Q ss_pred CCCceEEEEcCCCchHHHHHHHHcCCCc--EEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCC
Q 036539 365 GGKPDLIIGNYSDGNLVASVMASKLGIT--QATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIAST 442 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lva~lla~~~gvp--~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S 442 (749)
+.+||+||+|.+.....+.++++..+.| ++.+.|...... ..+ ....+..+|.++++|
T Consensus 82 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~--------------~~~------~~~~~~~~d~~i~~S 141 (359)
T PRK09922 82 ETQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHK--------------KHA------ECKKITCADYHLAIS 141 (359)
T ss_pred hcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCccccc--------------chh------hhhhhhcCCEEEEcC
Confidence 3489999999876666667777766655 444555321100 000 011237899999999
Q ss_pred HHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhh
Q 036539 443 FQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNE 522 (749)
Q Consensus 443 ~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 522 (749)
....+.. ..+|++ ..++.+||||+|.+.+.....
T Consensus 142 ~~~~~~~--------------------~~~~~~--~~ki~vi~N~id~~~~~~~~~------------------------ 175 (359)
T PRK09922 142 SGIKEQM--------------------MARGIS--AQRISVIYNPVEIKTIIIPPP------------------------ 175 (359)
T ss_pred HHHHHHH--------------------HHcCCC--HHHEEEEcCCCCHHHccCCCc------------------------
Confidence 8766511 123554 668999999999654421110
Q ss_pred hcCccCCCCCcEEEEEeccc--CCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC
Q 036539 523 HIGYLADRKKPIIFSMARLD--VVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~--~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 600 (749)
...++++|+++||+. +.||++.+++++.++.. +++|+|+|+|+. .+.++++++++++.
T Consensus 176 -----~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~---~~~l~ivG~g~~------------~~~l~~~~~~~~l~ 235 (359)
T PRK09922 176 -----ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTTG---EWQLHIIGDGSD------------FEKCKAYSRELGIE 235 (359)
T ss_pred -----ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhCC---CeEEEEEeCCcc------------HHHHHHHHHHcCCC
Confidence 023467899999996 46999999999998743 799999999987 67789999999999
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCceEEEECCCCHH
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN-QGGPAEIIVDGVSGFHIDPYNGD 679 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~-~GG~~EiI~dg~~G~lv~p~d~e 679 (749)
++|.|+|++.+ +.+++..+|+. +|++|+||.+|+||++++|||+||+|||+|+ .||+.|+|.++.+|++++++|++
T Consensus 236 ~~v~f~G~~~~--~~~~~~~~~~~-~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~ 312 (359)
T PRK09922 236 QRIIWHGWQSQ--PWEVVQQKIKN-VSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNID 312 (359)
T ss_pred CeEEEecccCC--cHHHHHHHHhc-CcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHH
Confidence 99999996542 34788888885 9999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 680 ESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 680 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
++|++|.+++ +|++.+ +.++......+|+-+.+.+++.++|.
T Consensus 313 ~la~~i~~l~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (359)
T PRK09922 313 EFVGKLNKVI----SGEVKY---QHDAIPNSIERFYEVLYFKNLNNALF 354 (359)
T ss_pred HHHHHHHHHH----hCcccC---CHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999996544 787654 22333334477888888888888775
No 45
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=2.2e-33 Score=303.06 Aligned_cols=370 Identities=21% Similarity=0.279 Sum_probs=263.0
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||++++...+ |..||...++. .++++|+++||+|+ ++|...+..... ....
T Consensus 1 kil~~~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~~~-- 51 (374)
T cd03817 1 KIGIFTDTYL---------PQVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPEE------EEVV-- 51 (374)
T ss_pred CeeEeehhcc---------CCCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCcc------cccc--
Confidence 6889986654 56799999998 77778899999999 888764332111 0000
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEec
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG-NLVASVMASKLGITQATIAH 398 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H 398 (749)
.....+.+... ..+.... ..+...+ ..... ..+||+||++.+.. +..+..++++.++|++.+.|
T Consensus 52 -~~~~~~~~~~~--------~~~~~~~---~~~~~~~-~~~~~--~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 116 (374)
T cd03817 52 -VVRPFRVPTFK--------YPDFRLP---LPIPRAL-IIILK--ELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYH 116 (374)
T ss_pred -cccccccccch--------hhhhhcc---ccHHHHH-HHHHh--hcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEec
Confidence 11111111110 0001000 0111111 12122 35899999997654 45667778889999999999
Q ss_pred CCcccccCCCcchhhhcCcccccchhh-hHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQF-IADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVL 477 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~-~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~ 477 (749)
+......... ............ ..++..++.+|.+++.|....+... ..+.
T Consensus 117 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~--------------------~~~~--- 168 (374)
T cd03817 117 TMYEDYTHYV-----PLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLR--------------------EYGV--- 168 (374)
T ss_pred CCHHHHHHHH-----hcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHH--------------------hcCC---
Confidence 8643110000 000000000011 2455678899999999987655111 1122
Q ss_pred CCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHh
Q 036539 478 DPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKN 557 (749)
Q Consensus 478 ~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l 557 (749)
..++.++|||+|...+.+......+ +.++. +.++++|+++||+.+.||++.+++++.++
T Consensus 169 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~~ 227 (374)
T cd03817 169 KRPIEVIPTGIDLDRFEPVDGDDER-------------------RKLGI--PEDEPVLLYVGRLAKEKNIDFLIRAFARL 227 (374)
T ss_pred CCceEEcCCccchhccCccchhHHH-------------------HhcCC--CCCCeEEEEEeeeecccCHHHHHHHHHHH
Confidence 3468999999999887665432211 22333 45678999999999999999999999999
Q ss_pred HccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCC
Q 036539 558 KRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEA 637 (749)
Q Consensus 558 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~ 637 (749)
.+..++++|+++|+++. .+.+.++++++++.++|.|+| .++.+++..+++. +|++++||..|+
T Consensus 228 ~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~l~~s~~e~ 290 (374)
T cd03817 228 LKEEPDVKLVIVGDGPE------------REELEELARELGLADRVIFTG----FVPREELPDYYKA-ADLFVFASTTET 290 (374)
T ss_pred HHhCCCeEEEEEeCCch------------HHHHHHHHHHcCCCCcEEEec----cCChHHHHHHHHH-cCEEEecccccC
Confidence 87778999999999876 567888888999999999999 7778999999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWK 717 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 717 (749)
+|++++|||+||+|||+++.|+..|++.++.+|+++++.+. +++++|.+ +.++++.+++|++++++.+.+ ++
T Consensus 291 ~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~----l~~~~~~~~~~~~~~~~~~~~-~~-- 362 (374)
T cd03817 291 QGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLR----LLQDPELRRRLSKNAEESAEK-FS-- 362 (374)
T ss_pred cChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHH----HHhChHHHHHHHHHHHHHHHH-HH--
Confidence 99999999999999999999999999999999999998887 88888854 558999999999999999854 44
Q ss_pred HHHHHHHHHHH
Q 036539 718 IYANKMLNMGC 728 (749)
Q Consensus 718 ~~a~~ll~ly~ 728 (749)
.++++.++|+
T Consensus 363 -~~~~~~~~~~ 372 (374)
T cd03817 363 -FAKKVEKLYE 372 (374)
T ss_pred -HHHHHHHHHh
Confidence 6666766665
No 46
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=6.4e-34 Score=309.61 Aligned_cols=346 Identities=15% Similarity=0.184 Sum_probs=246.6
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+++++.. ..||.+.++. ++++.|++.||+|+ +++...... ..... . ..
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~---~~~~~---~-~~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEG---DYDDE---I-EK 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCc---chHHH---H-HH
Confidence 578887543 2599999999 66666778999999 887653221 00111 1 11
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcE-EEEec
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQ-ATIAH 398 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~-v~t~H 398 (749)
.++.+++++.... . ...+...+.+.+. ..+||+||+|......++.++++..+.|. +...|
T Consensus 51 ~~~~~~~~~~~~~-----------~----~~~~~~~~~~~~~---~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK-----------N----PLKYFKKLYKLIK---KNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc-----------c----HHHHHHHHHHHHh---cCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 2455665543321 1 1122222222222 35899999999877666667777777775 45677
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
........ .+.. .. ....+....+.+|.++++|....+.... . +. .
T Consensus 113 ~~~~~~~~----~~~~----~~---~~~~~~~~~~~~~~~i~~s~~~~~~~~~--------------------~-~~--~ 158 (358)
T cd03812 113 NTSDSHDK----KKKI----LK---YKVLRKLINRLATDYLACSEEAGKWLFG--------------------K-VK--N 158 (358)
T ss_pred cccccccc----cchh----hH---HHHHHHHHHhcCCEEEEcCHHHHHHHHh--------------------C-CC--c
Confidence 65322110 0000 00 0123455678899999999876652110 0 12 5
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.+||||+|.+.|.+....... ++..+. ..++++|+|+||+.+.||++.+++++..+.
T Consensus 159 ~~~~vi~ngvd~~~~~~~~~~~~~------------------~~~~~~--~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~ 218 (358)
T cd03812 159 KKFKVIPNGIDLEKFIFNEEIRKK------------------RRELGI--LEDKFVIGHVGRFSEQKNHEFLIEIFAELL 218 (358)
T ss_pred ccEEEEeccCcHHHcCCCchhhhH------------------HHHcCC--CCCCEEEEEEeccccccChHHHHHHHHHHH
Confidence 789999999999887654332211 112233 567889999999999999999999999999
Q ss_pred ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCC
Q 036539 559 RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAF 638 (749)
Q Consensus 559 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~f 638 (749)
+..++++++|+|+|+. .+.+++.++++++.++|.|+|. .+++..+++. ||++|+||.+|+|
T Consensus 219 ~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~E~~ 279 (358)
T cd03812 219 KKNPNAKLLLVGDGEL------------EEEIKKKVKELGLEDKVIFLGV------RNDVPELLQA-MDVFLFPSLYEGL 279 (358)
T ss_pred HhCCCeEEEEEeCCch------------HHHHHHHHHhcCCCCcEEEecc------cCCHHHHHHh-cCEEEecccccCC
Confidence 8889999999999976 5678888889999999999994 3478889995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 036539 639 GLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRIN 711 (749)
Q Consensus 639 GLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~ 711 (749)
|++++|||+||+|||+|+.||..|++.+ ..|++..+++++++|++|.+ +.+||+.++.++..+.....
T Consensus 280 ~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~----l~~~~~~~~~~~~~~~~~~~ 347 (358)
T cd03812 280 PLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILK----LKSEDRRERSSESIKKKGLD 347 (358)
T ss_pred CHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHH----HHhCcchhhhhhhhhhccch
Confidence 9999999999999999999999999988 46777777788999999965 55899999988888776653
No 47
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=1.9e-33 Score=314.99 Aligned_cols=372 Identities=14% Similarity=0.121 Sum_probs=242.0
Q ss_pred ceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcC-CcccceEEEEeCCCCCCCCC-------c
Q 036539 237 ILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQG-LYIKPQIVVVTRLIPDARGT-------K 308 (749)
Q Consensus 237 m~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G-~eV~~~i~V~T~~~p~~~g~-------~ 308 (749)
+.|||+|++.-+. |..+|+.+.++ .++.+|+++| |+|+ |+++..+..... +
T Consensus 3 ~~mrIaivTdt~l---------P~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~ 61 (462)
T PLN02846 3 KKQHIAIFTTASL---------PWMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKIT 61 (462)
T ss_pred CCCEEEEEEcCCC---------CCCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCcccccccccccccc
Confidence 3599999997776 56799999999 7777899999 7999 998876532110 0
Q ss_pred cCCcc--c-cccCccceEEEEecCccCCcccccccc--ccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHH-
Q 036539 309 CNQEL--E-PIEGTKHSNILRVPFKTDKGILHRWVS--RFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG-NLV- 381 (749)
Q Consensus 309 ~~~~~--e-~i~~~~~~~I~rvp~~~~~~~~~~~is--r~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~-~lv- 381 (749)
..... + .+....+.++.++|..+... .+..++ +..+++ ..++.+.+.+ .+|||||.+.+.. ++.
T Consensus 62 f~~~~~~e~~~~~~~~~~v~r~~s~~~p~-yp~r~~~~~r~~~~-----~~~i~~~l~~---~~pDVIHv~tP~~LG~~~ 132 (462)
T PLN02846 62 FSSPSEQEAYVRQWLEERISFLPKFSIKF-YPGKFSTDKRSILP-----VGDISETIPD---EEADIAVLEEPEHLTWYH 132 (462)
T ss_pred ccCchhhhhhhhhhccCeEEEeccccccc-CcccccccccccCC-----hHHHHHHHHh---cCCCEEEEcCchhhhhHH
Confidence 00000 0 01111123455555332110 000000 011111 1233333333 4899999998875 554
Q ss_pred -HHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCcccccc
Q 036539 382 -ASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHT 460 (749)
Q Consensus 382 -a~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~ 460 (749)
+...++++++ ++.+.|+-.. .|. . +++. .....+............++|.+++.|....+ +
T Consensus 133 ~g~~~~~k~~~-vV~tyHT~y~-~Y~--~-~~~~-g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~--------l---- 194 (462)
T PLN02846 133 HGKRWKTKFRL-VIGIVHTNYL-EYV--K-REKN-GRVKAFLLKYINSWVVDIYCHKVIRLSAATQD--------Y---- 194 (462)
T ss_pred HHHHHHhcCCc-EEEEECCChH-HHH--H-Hhcc-chHHHHHHHHHHHHHHHHhcCEEEccCHHHHH--------H----
Confidence 5666667766 8889998321 110 0 0000 00000001111111222458999999964332 0
Q ss_pred ccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCC--CcEEEEE
Q 036539 461 AFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRK--KPIIFSM 538 (749)
Q Consensus 461 ~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~--k~vIl~v 538 (749)
.....+.++|||.+.|.|....... ..+ ..+ .+.++|+
T Consensus 195 -----------------~~~~i~~v~GVd~~~f~~~~~~~~~--------------------~~~---~~~~~~~~~l~v 234 (462)
T PLN02846 195 -----------------PRSIICNVHGVNPKFLEIGKLKLEQ--------------------QKN---GEQAFTKGAYYI 234 (462)
T ss_pred -----------------hhCEEecCceechhhcCCCcccHhh--------------------hcC---CCCCcceEEEEE
Confidence 1122334589999988766432111 011 122 3579999
Q ss_pred ecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHH
Q 036539 539 ARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGEL 618 (749)
Q Consensus 539 GRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el 618 (749)
|||.+.||++.|++|+.++.+..++++|+|+|+|++ .++++++++++++..++ |.| ....+
T Consensus 235 GRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~------------~~~L~~~a~~l~l~~~v-f~G----~~~~~-- 295 (462)
T PLN02846 235 GKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGED------------SDEVKAAAEKLELDVRV-YPG----RDHAD-- 295 (462)
T ss_pred ecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCcc------------HHHHHHHHHhcCCcEEE-ECC----CCCHH--
Confidence 999999999999999999987778899999999998 78899999999886544 777 33333
Q ss_pred HHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHH
Q 036539 619 YRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTY 698 (749)
Q Consensus 619 ~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~ 698 (749)
.+++ ++|+||+||..|+||++++||||||+|||+++.++ .+++.++.+|+.++ |.++++++|..++. .++
T Consensus 296 -~~~~-~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~---~~~-- 365 (462)
T PLN02846 296 -PLFH-DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALA---EEP-- 365 (462)
T ss_pred -HHHH-hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHc---cCc--
Confidence 4555 58999999999999999999999999999999998 59999999999985 89999999976552 233
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 699 WNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 699 ~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
..++.+++ ++|||+.++++++++|+.-
T Consensus 366 -~~~~~~a~----~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 366 -APLTDAQR----HELSWEAATERFLRVADLD 392 (462)
T ss_pred -hhHHHHHH----HhCCHHHHHHHHHHHhccC
Confidence 22333332 5899999999999999865
No 48
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=3.9e-33 Score=313.26 Aligned_cols=391 Identities=12% Similarity=0.054 Sum_probs=255.1
Q ss_pred CceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCcccc
Q 036539 236 PILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEP 315 (749)
Q Consensus 236 pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~ 315 (749)
|...||++++.-. +|.+..+. +++++|+++||+|+ |++...+.. .+.
T Consensus 1 ~~~~~~~~~~~~~-------------~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~~--------~~~ 47 (415)
T cd03816 1 PKRKRVCVLVLGD-------------IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETPP--------HDE 47 (415)
T ss_pred CCccEEEEEEecc-------------cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCCC--------CHH
Confidence 4457888887422 35566667 67778899999999 888653221 111
Q ss_pred ccCccceEEEEecCcc-CCccccccccccccccchHHHHH---HHHHHHHHHcCCCceEEEEcCCCc---hHHHHHHHHc
Q 036539 316 IEGTKHSNILRVPFKT-DKGILHRWVSRFDVYPYLEGFAQ---DATTMILEFLGGKPDLIIGNYSDG---NLVASVMASK 388 (749)
Q Consensus 316 i~~~~~~~I~rvp~~~-~~~~~~~~isr~~i~pyl~~f~~---~~~~~l~~~l~~~pDIIh~h~~~~---~lva~lla~~ 388 (749)
.....++.+.+++... ..+. ......+...... .+...+.. ..+||+||+|.+.. ..++.++++.
T Consensus 48 ~~~~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~--~~~~Dvi~~~~~~~~~~~~~a~~~~~~ 119 (415)
T cd03816 48 ILSNPNITIHPLPPPPQRLNK------LPFLLFAPLKVLWQFFSLLWLLYK--LRPADYILIQNPPSIPTLLIAWLYCLL 119 (415)
T ss_pred HhcCCCEEEEECCCCcccccc------chHHHHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 1112357777776553 1100 0011111111111 11111222 35899999987553 3456666777
Q ss_pred CCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccch
Q 036539 389 LGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLC 468 (749)
Q Consensus 389 ~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly 468 (749)
.++|+|++.|+....... ........... .....++...+.+|.||++|....+...
T Consensus 120 ~~~~~V~~~h~~~~~~~~---~~~~~~~~~~~--~~~~~e~~~~~~ad~ii~vS~~~~~~l~------------------ 176 (415)
T cd03816 120 RRTKLIIDWHNYGYTILA---LKLGENHPLVR--LAKWYEKLFGRLADYNLCVTKAMKEDLQ------------------ 176 (415)
T ss_pred hCCeEEEEcCCchHHHHh---cccCCCCHHHH--HHHHHHHHHhhcCCEeeecCHHHHHHHH------------------
Confidence 899999999986321110 00000000011 1112466778899999999988766211
Q ss_pred hhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhcccc-chhhhcCccCCCCCcEEEEEecccCCCCH
Q 036539 469 RVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKE-DNNEHIGYLADRKKPIIFSMARLDVVKNL 547 (749)
Q Consensus 469 ~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~-~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl 547 (749)
..|++ ..|+.|||||. ...|.|........... . ...-+.+. ......+. .+++..+++++||+.+.||+
T Consensus 177 --~~~~~--~~ki~vI~Ng~-~~~f~p~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~-~~~~~~vi~~~grl~~~K~~ 247 (415)
T cd03816 177 --QFNNW--KIRATVLYDRP-PEQFRPLPLEEKHELFL-K--LAKTFLTRELRIGAVQL-SEERPALLVSSTSWTPDEDF 247 (415)
T ss_pred --hhhcc--CCCeeecCCCC-HHHceeCcHHHHHHHHH-h--cccccccccccccccee-cCCCceEEEEeccccCCCCH
Confidence 12343 78999999994 45666654322110000 0 00000000 00001122 12345678889999999999
Q ss_pred HHHHHHHHHhHc------cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHH
Q 036539 548 TGLTEWYGKNKR------LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRC 621 (749)
Q Consensus 548 ~~LieA~~~l~~------~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~ 621 (749)
+.|++|+..+.+ .+|+++|+|+|+|+. .+.++++++++++.+.+.+.| +++.+++..+
T Consensus 248 ~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~------------~~~l~~~~~~~~l~~~~~~~g----~~~~~~~~~~ 311 (415)
T cd03816 248 GILLDALVAYEKSAATGPKLPKLLCIITGKGPL------------KEKYLERIKELKLKKVTIRTP----WLSAEDYPKL 311 (415)
T ss_pred HHHHHHHHHHHHhhcccccCCCEEEEEEecCcc------------HHHHHHHHHHcCCCcEEEEcC----cCCHHHHHHH
Confidence 999999999864 246899999999987 678999999999965444446 6778999999
Q ss_pred HHccCcEEEECCC---CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCC---
Q 036539 622 IADTKGAFVQPAL---YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVD--- 695 (749)
Q Consensus 622 la~aadvfV~PS~---~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~d--- 695 (749)
|+ ++|++|+|+. .|+||++++|||+||+|||+|+.||..|+|+++.+|++++ |++++|++|..+ ++|
T Consensus 312 l~-~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~l----l~~~~~ 384 (415)
T cd03816 312 LA-SADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDL----LSNFPN 384 (415)
T ss_pred HH-hCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHH----HhcCCC
Confidence 99 5999997533 5789999999999999999999999999999999999994 899999999654 467
Q ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 036539 696 PTYWNKFSTEGLKRINECYTWKIYANKML 724 (749)
Q Consensus 696 p~~~~~ms~~a~~~v~~~ysw~~~a~~ll 724 (749)
|+.+++|+++|+++. .++|+...++.+
T Consensus 385 ~~~~~~m~~~~~~~~--~~~~~~~~~~~~ 411 (415)
T cd03816 385 RGKLNSLKKGAQEES--ELRWDENWDRVV 411 (415)
T ss_pred HHHHHHHHHHHHHhh--hcCHHHHHHHHh
Confidence 999999999999987 678877665544
No 49
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=3.5e-33 Score=303.88 Aligned_cols=343 Identities=19% Similarity=0.224 Sum_probs=245.3
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
|||++++... ..||.+.++. .+++.|+++||+|+ +++....
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~~---------------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEKK---------------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeecc----------------
Confidence 7999997542 2489999999 66777899999999 7774411
Q ss_pred ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC--CCcEEEE
Q 036539 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL--GITQATI 396 (749)
Q Consensus 319 ~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~--gvp~v~t 396 (749)
. +.+.+. ..+|||||+|++..+.+......+. ++|.+++
T Consensus 42 ---------~---------------------------~~~~~~---~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ---------A---------------------------LISKIE---IINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ---------h---------------------------hhhChh---cccCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 0 000111 2389999999866544443333444 9999999
Q ss_pred ecCCccccc----CCCcchhh-h-----cCcccc---cchhhh-HHHHHh-hhCCEEEeCCHHHHhhcCCCCCccccccc
Q 036539 397 AHALEKTKY----EDSDVKWK-E-----LDPKYH---FSCQFI-ADTIAM-NATDFIIASTFQEIAGSKDRPGQYESHTA 461 (749)
Q Consensus 397 ~H~l~~~k~----~~s~~~~~-~-----~~~~y~---f~~~~~-~e~~a~-~~aD~IIt~S~~~~~~~~~~~~qye~~~~ 461 (749)
+|+...... ......|. . ....+. +..... .....+ ..++.++++|....+...+.
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~--------- 153 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSS--------- 153 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhc---------
Confidence 998643211 00000000 0 000000 111111 111112 45677888886554411110
Q ss_pred cccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecc
Q 036539 462 FTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARL 541 (749)
Q Consensus 462 ~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL 541 (749)
..++ ..++.++|||+|.+.|.|......+ +.+++ +++++++++.|+.
T Consensus 154 ----------~~~~--~~~~~vi~ngi~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~~~~ 200 (365)
T cd03825 154 ----------SLFK--GIPIEVIPNGIDTTIFRPRDKREAR-------------------KRLGL--PADKKIILFGAVG 200 (365)
T ss_pred ----------cccC--CCceEEeCCCCcccccCCCcHHHHH-------------------HHhCC--CCCCeEEEEEecC
Confidence 0122 5789999999999988765433211 23454 5566778777777
Q ss_pred cC--CCCHHHHHHHHHHhHcc-CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCC-hHH
Q 036539 542 DV--VKNLTGLTEWYGKNKRL-RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLR-NGE 617 (749)
Q Consensus 542 ~~--~Kgl~~LieA~~~l~~~-~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~-~~e 617 (749)
.. .||++.+++++..+.+. .++++++++|++.. ... .++..+|.|+| +++ .++
T Consensus 201 ~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~------------~~~-------~~~~~~v~~~g----~~~~~~~ 257 (365)
T cd03825 201 GTDPRKGFDELIEALKRLAERWKDDIELVVFGASDP------------EIP-------PDLPFPVHYLG----SLNDDES 257 (365)
T ss_pred CCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCch------------hhh-------ccCCCceEecC----CcCCHHH
Confidence 65 89999999999998764 57899999999865 111 14567899999 555 778
Q ss_pred HHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHH
Q 036539 618 LYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPT 697 (749)
Q Consensus 618 l~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~ 697 (749)
+..+|+. +|++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|.+++ +|++
T Consensus 258 ~~~~~~~-ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~----~~~~ 332 (365)
T cd03825 258 LALIYSA-ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLL----ADPD 332 (365)
T ss_pred HHHHHHh-CCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHH----hCHH
Confidence 9999994 9999999999999999999999999999999999999999999999999999999999996544 7999
Q ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 698 YWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 698 ~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
.+.+|++++++.+.++|||+.++++|+++|+.
T Consensus 333 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 333 EREELGEAARELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999863
No 50
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=2.2e-32 Score=292.64 Aligned_cols=356 Identities=20% Similarity=0.261 Sum_probs=256.3
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||++++.. .||.+.++. .|++.|.++||+|+ +++....... ....
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~----------~~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDELE----------ELEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCccc----------cccc
Confidence 57788754 278888888 67777888999999 8886532211 0111
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHH-cCCCcEEEEec
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMAS-KLGITQATIAH 398 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~-~~gvp~v~t~H 398 (749)
.++.+..+|..... .+ .+..+ .....+.+.+. +.+||+||+|...+...+.+.++ ..+.+++.+.|
T Consensus 46 ~~~~~~~~~~~~~~------~~---~~~~~-~~~~~~~~~~~---~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------IN---PFKDL-KALLRLYRLLR---KERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------cC---hHhHH-HHHHHHHHHHH---hcCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 24566666654310 00 11111 11112222222 35899999998777777777766 45566777888
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
+........ ... . ......++..++.+|.+++.|....+...+ ..+.+ ..
T Consensus 113 ~~~~~~~~~-~~~-------~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~-------------------~~~~~-~~ 162 (359)
T cd03808 113 GLGFVFTSG-GLK-------R--RLYLLLERLALRFTDKVIFQNEDDRDLALK-------------------LGIIK-KK 162 (359)
T ss_pred Ccchhhccc-hhH-------H--HHHHHHHHHHHhhccEEEEcCHHHHHHHHH-------------------hcCCC-cC
Confidence 763322110 000 0 001123456778899999999877662111 11111 13
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.+++||+|.+.+.+.... .+.++++|+++||+.+.||++.+++++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 214 (359)
T cd03808 163 KTVLIPGSGVDLDRFSPSPEP----------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILK 214 (359)
T ss_pred ceEEecCCCCChhhcCccccc----------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 577788999998776543211 0356789999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHH-HHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCC
Q 036539 559 RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHA-LMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEA 637 (749)
Q Consensus 559 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~-li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~ 637 (749)
+..++++|+|+|.+.. ...... .+.+.+...+|.|+|. .+++..+++. +|++++||..|+
T Consensus 215 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~i~ps~~e~ 275 (359)
T cd03808 215 AKGPNVRLLLVGDGDE------------ENPAAILEIEKLGLEGRVEFLGF------RDDVPELLAA-ADVFVLPSYREG 275 (359)
T ss_pred hcCCCeEEEEEcCCCc------------chhhHHHHHHhcCCcceEEEeec------cccHHHHHHh-ccEEEecCcccC
Confidence 7778999999999976 111112 3667778889999994 4478899995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWK 717 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 717 (749)
||++++|||+||+|||+|+.+|..|++.++.+|++++++|+++++++|.+ +..|++.+.++++++++++.++|||+
T Consensus 276 ~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~----l~~~~~~~~~~~~~~~~~~~~~~s~~ 351 (359)
T cd03808 276 LPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIER----LIEDPELRARMGQAARKRAEEEFDEE 351 (359)
T ss_pred cchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHhcCHH
Confidence 99999999999999999999999999999999999999999999999965 45899999999999999999999999
Q ss_pred HHHHHHH
Q 036539 718 IYANKML 724 (749)
Q Consensus 718 ~~a~~ll 724 (749)
.++++++
T Consensus 352 ~~~~~~~ 358 (359)
T cd03808 352 IVVKKLL 358 (359)
T ss_pred HHHHHhh
Confidence 9999886
No 51
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=6.3e-33 Score=300.28 Aligned_cols=364 Identities=20% Similarity=0.203 Sum_probs=255.2
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||++++.+..++ ..||.+.|+. +|+++|++.||+|+ +++......... ......
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~~-----~~~~~~- 54 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLLL-----LPLRAA- 54 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCcccccc-----ccchhc-
Confidence 578887666531 4699999999 77777899999998 777653222110 000000
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecC
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHA 399 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~ 399 (749)
... ... ......+.............+. ..+||+||++++..... +..++|+++++|+
T Consensus 55 --~~~---~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 55 --LRL---LLR---------LPRRLLWGLLFLLRAGDRLLLL---LLGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred --ccc---ccc---------cccccccchhhHHHHHHHHHhh---hcCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 000 000 0001111111111111111111 35899999998776443 6679999999998
Q ss_pred CcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCC
Q 036539 400 LEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479 (749)
Q Consensus 400 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ 479 (749)
+.....+...... .........+..++.+|.++++|...++...+ ..+++ ..
T Consensus 113 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~-------------------~~~~~--~~ 164 (365)
T cd03809 113 LIPLRFPEYFSPG-------FRRYFRRLLRRALRRADAIITVSEATKRDLLR-------------------YLGVP--PD 164 (365)
T ss_pred chhhhCcccCCHH-------HHHHHHHHHHHHHHHcCEEEEccHHHHHHHHH-------------------HhCcC--HH
Confidence 7443322111110 00111123456789999999999877662111 11222 56
Q ss_pred ceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHc
Q 036539 480 KFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKR 559 (749)
Q Consensus 480 ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~ 559 (749)
++.++|||+|...+.+..... + ..... ..++++|+++||+.+.||++.+++++.++.+
T Consensus 165 ~~~vi~~~~~~~~~~~~~~~~-~-------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~ 222 (365)
T cd03809 165 KIVVIPLGVDPRFRPPPAEAE-V-------------------LRALY--LLPRPYFLYVGTIEPRKNLERLLEAFARLPA 222 (365)
T ss_pred HEEeeccccCccccCCCchHH-H-------------------HHHhc--CCCCCeEEEeCCCccccCHHHHHHHHHHHHH
Confidence 899999999998876654322 1 00111 4567899999999999999999999999998
Q ss_pred cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCc
Q 036539 560 LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFG 639 (749)
Q Consensus 560 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fG 639 (749)
..++++|+++|.+... .....+.+++.++.++|.|+| .++.+++..+++. +|++++||.+|+||
T Consensus 223 ~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~ps~~e~~~ 286 (365)
T cd03809 223 KGPDPKLVIVGKRGWL-----------NEELLARLRELGLGDRVRFLG----YVSDEELAALYRG-ARAFVFPSLYEGFG 286 (365)
T ss_pred hcCCCCEEEecCCccc-----------cHHHHHHHHHcCCCCeEEECC----CCChhHHHHHHhh-hhhhcccchhccCC
Confidence 7778999999987651 122223336678889999999 7778899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 036539 640 LTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719 (749)
Q Consensus 640 LtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 719 (749)
++++|||++|+|||+|+.|+..|++. .+|+++++.|+++++++|.+ +++|++.+.++++++++.+ ++|||+.+
T Consensus 287 ~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~----l~~~~~~~~~~~~~~~~~~-~~~sw~~~ 359 (365)
T cd03809 287 LPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIER----LLEDPALREELRERGLARA-KRFSWEKT 359 (365)
T ss_pred CCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHH----HhcCHHHHHHHHHHHHHHH-HhCCHHHH
Confidence 99999999999999999999999984 47999999999999999965 4589999999999999665 88999999
Q ss_pred HHHHH
Q 036539 720 ANKML 724 (749)
Q Consensus 720 a~~ll 724 (749)
+++++
T Consensus 360 ~~~~~ 364 (365)
T cd03809 360 ARRTL 364 (365)
T ss_pred HHHHh
Confidence 99886
No 52
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=2.7e-32 Score=293.81 Aligned_cols=356 Identities=18% Similarity=0.174 Sum_probs=245.5
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||++++++..| ..+||.+.++. .|+++|+++||+|+ +++.......... . .
T Consensus 1 kIl~i~~~~~~--------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~-~--------~ 51 (359)
T cd03823 1 RILVVNHLYPP--------RSVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQDK-E--------V 51 (359)
T ss_pred CeeEEcccCCc--------ccccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCccc-c--------c
Confidence 68999866654 24699999999 66667788999999 8876532221110 0 0
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEec
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG-NLVASVMASKLGITQATIAH 398 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H 398 (749)
.+..+...+.... ..............+...........+.+ ..+||+||+|.+.. +......++..++|++.+.|
T Consensus 52 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h 128 (359)
T cd03823 52 IGVVVYGRPIDEV-LRSALPRDLFHLSDYDNPAVVAEFARLLE--DFRPDVVHFHHLQGLGVSILRAARDRGIPIVLTLH 128 (359)
T ss_pred ccceeeccccccc-cCCCchhhhhHHHhccCHHHHHHHHHHHH--HcCCCEEEECCccchHHHHHHHHHhcCCCEEEEEe
Confidence 0111111110000 00000000000010111111122222233 34899999998754 33344456678999999999
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
+...... +. .......|.++++|....+... ..+.. .
T Consensus 129 d~~~~~~------~~---------------~~~~~~~d~ii~~s~~~~~~~~--------------------~~~~~--~ 165 (359)
T cd03823 129 DYWLICP------RQ---------------GLFKKGGDAVIAPSRFLLDRYV--------------------ANGLF--A 165 (359)
T ss_pred eeeeecc------hh---------------hhhccCCCEEEEeCHHHHHHHH--------------------HcCCC--c
Confidence 7532110 00 0112233999999987665211 11222 4
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.+|+||+|...+.+... +. +.++++|+++||+.+.||++.+++++.++.
T Consensus 166 ~~~~vi~n~~~~~~~~~~~~--------------------------~~--~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 217 (359)
T cd03823 166 EKISVIRNGIDLDRAKRPRR--------------------------AP--PGGRLRFGFIGQLTPHKGVDLLLEAFKRLP 217 (359)
T ss_pred cceEEecCCcChhhcccccc--------------------------CC--CCCceEEEEEecCccccCHHHHHHHHHHHH
Confidence 68999999999887654321 01 456788999999999999999999999987
Q ss_pred ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC-CCC
Q 036539 559 RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL-YEA 637 (749)
Q Consensus 559 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~-~E~ 637 (749)
+ ++++|+++|.+.. ........ +...+|.++| .++.+++..+++. +|++++||. .|+
T Consensus 218 ~--~~~~l~i~G~~~~------------~~~~~~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~ps~~~e~ 275 (359)
T cd03823 218 R--GDIELVIVGNGLE------------LEEESYEL---EGDPRVEFLG----AYPQEEIDDFYAE-IDVLVVPSIWPEN 275 (359)
T ss_pred h--cCcEEEEEcCchh------------hhHHHHhh---cCCCeEEEeC----CCCHHHHHHHHHh-CCEEEEcCcccCC
Confidence 6 6899999999876 11111111 5668999999 7778999999995 999999998 799
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWK 717 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 717 (749)
||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.+++ +|++.+++++++++++... +
T Consensus 276 ~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~----~ 347 (359)
T cd03823 276 FPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLI----DDPDLLERLRAGIEPPRSI----E 347 (359)
T ss_pred CChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHH----hChHHHHHHHHhHHHhhhH----H
Confidence 9999999999999999999999999999999999999999999999996544 7999999999999877633 9
Q ss_pred HHHHHHHHHHH
Q 036539 718 IYANKMLNMGC 728 (749)
Q Consensus 718 ~~a~~ll~ly~ 728 (749)
.++++++++|+
T Consensus 348 ~~~~~~~~~~~ 358 (359)
T cd03823 348 DQAEEYLKLYR 358 (359)
T ss_pred HHHHHHHHHhh
Confidence 99999999885
No 53
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=2.7e-32 Score=290.60 Aligned_cols=345 Identities=16% Similarity=0.203 Sum_probs=249.3
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+++++...+ .||.+.++. +|++.|+++||+|+ +++...... ..... .
T Consensus 1 kI~i~~~~~~~----------~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~-------~~~~~--~ 49 (348)
T cd03820 1 KILFVIPSLGN----------AGGAERVLS--------NLANALAEKGHEVT----IISLDKGEP-------PFYEL--D 49 (348)
T ss_pred CeEEEeccccC----------CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCCC-------Ccccc--C
Confidence 68888866542 589999998 67777888999999 888654320 00011 1
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCC-CcEEEEec
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLG-ITQATIAH 398 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~g-vp~v~t~H 398 (749)
.++.+..++..... ..+.+ ..+...+.+.+. ..+||+||++.+.. ...+.....+ +|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~----------~~~~~-~~~~~~~~~~l~---~~~~d~i~~~~~~~--~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDS----------KLLAR-FKKLRRLRKLLK---NNKPDVVISFLTSL--LTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeeccccccc----------chhcc-ccchHHHHHhhc---ccCCCEEEEcCchH--HHHHHHHhhccccEEEecC
Confidence 13444444432210 00000 011112222222 35999999998772 2222223344 48999999
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
+...... ... .....++..++.+|.+++.|...... ..+. ..
T Consensus 114 ~~~~~~~--~~~------------~~~~~~~~~~~~~d~ii~~s~~~~~~----------------------~~~~--~~ 155 (348)
T cd03820 114 NSPDAYK--KRL------------RRLLLRRLLYRRADAVVVLTEEDRAL----------------------YYKK--FN 155 (348)
T ss_pred CCccchh--hhh------------HHHHHHHHHHhcCCEEEEeCHHHHHH----------------------hhcc--CC
Confidence 7532110 000 00012456789999999999776410 0011 25
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.++|||++...+.+. .+.+++.++++|++.+.||++.+++++.++.
T Consensus 156 ~~~~vi~~~~~~~~~~~~-------------------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 156 KNVVVIPNPLPFPPEEPS-------------------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred CCeEEecCCcChhhcccc-------------------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 689999999998765432 0345779999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCC
Q 036539 559 RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAF 638 (749)
Q Consensus 559 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~f 638 (749)
+..++++|+|+|++.. ...+.++++++++..+|.+.|. .+++..+|+. +|++++||.+|+|
T Consensus 205 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~i~ps~~e~~ 265 (348)
T cd03820 205 KKHPDWKLRIVGDGPE------------REALEALIKELGLEDRVILLGF------TKNIEEYYAK-ASIFVLTSRFEGF 265 (348)
T ss_pred hcCCCeEEEEEeCCCC------------HHHHHHHHHHcCCCCeEEEcCC------cchHHHHHHh-CCEEEeCcccccc
Confidence 8788999999999877 5667778899999999999993 4689999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 036539 639 GLTVIEAMNCGLPTFATNQG-GPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWK 717 (749)
Q Consensus 639 GLtvlEAMa~GlPVVat~~G-G~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 717 (749)
|++++|||+||+|||+|+.+ +..+++.++.+|+++++.|+++++++|.++ ++||+.+++|++++++.+ ++|+|+
T Consensus 266 ~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~l----l~~~~~~~~~~~~~~~~~-~~~~~~ 340 (348)
T cd03820 266 PMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRL----MEDEELRKRMGANARESA-ERFSIE 340 (348)
T ss_pred CHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHH----HcCHHHHHHHHHHHHHHH-HHhCHH
Confidence 99999999999999999875 567778777799999999999999999654 489999999999997665 889999
Q ss_pred HHHHHHH
Q 036539 718 IYANKML 724 (749)
Q Consensus 718 ~~a~~ll 724 (749)
.+++++.
T Consensus 341 ~~~~~~~ 347 (348)
T cd03820 341 NIIKQWE 347 (348)
T ss_pred HHHHHhc
Confidence 9998875
No 54
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=2.9e-32 Score=308.76 Aligned_cols=395 Identities=15% Similarity=0.183 Sum_probs=256.6
Q ss_pred hcCCceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCc
Q 036539 233 SSLPILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQE 312 (749)
Q Consensus 233 ~~~pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~ 312 (749)
+|....++|+++.|+.. ..||.++.+.+.|++| .++|+++. |.|+|...... . .+.
T Consensus 28 ~~~~~~~~v~f~HP~~~----------~ggG~ERvl~~a~~~l--------~~~~~~~~--v~iyt~~~d~~-~---~~~ 83 (463)
T PLN02949 28 ARRSRKRAVGFFHPYTN----------DGGGGERVLWCAVRAI--------QEENPDLD--CVIYTGDHDAS-P---DSL 83 (463)
T ss_pred cccCCCcEEEEECCCCC----------CCCChhhHHHHHHHHH--------HhhCCCCe--EEEEcCCCCCC-H---HHH
Confidence 34445678999866553 2369999999666654 66788544 44788652211 1 111
Q ss_pred cccccCccceEE------EEecCccCCccccccccccccccch---HHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHH
Q 036539 313 LEPIEGTKHSNI------LRVPFKTDKGILHRWVSRFDVYPYL---EGFAQDATTMILEFLGGKPDLIIGNYSDGNLVAS 383 (749)
Q Consensus 313 ~e~i~~~~~~~I------~rvp~~~~~~~~~~~isr~~i~pyl---~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~ 383 (749)
+......-++.+ +++. .++|++ ...|+.+ .+....+...+.......||+++-....+..+
T Consensus 84 l~~~~~~~~i~~~~~~~~v~l~-------~~~~~~-~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~~~~-- 153 (463)
T PLN02949 84 AARARDRFGVELLSPPKVVHLR-------KRKWIE-EETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYAFTY-- 153 (463)
T ss_pred HHHHHhhcceecCCCceEEEec-------cccccc-cccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccHH--
Confidence 111111112221 1111 134554 3345542 22222222222222123676555333322111
Q ss_pred HHHHcCCCcEEEEecCCcccc------------cCCC----cchhhhcCcccccchhhh-HHHHHhhhCCEEEeCCHHHH
Q 036539 384 VMASKLGITQATIAHALEKTK------------YEDS----DVKWKELDPKYHFSCQFI-ADTIAMNATDFIIASTFQEI 446 (749)
Q Consensus 384 lla~~~gvp~v~t~H~l~~~k------------~~~s----~~~~~~~~~~y~f~~~~~-~e~~a~~~aD~IIt~S~~~~ 446 (749)
.+++..++|+++.+|-..... |..+ ...|....+.+ |...+. .+....+.||.|+++|....
T Consensus 154 pl~~~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~-Y~~~~~~l~~~~~~~ad~ii~nS~~t~ 232 (463)
T PLN02949 154 PLARLFGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKIL-YYRAFAWMYGLVGRCAHLAMVNSSWTK 232 (463)
T ss_pred HHHHhcCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHH-HHHHHHHHHHHHcCCCCEEEECCHHHH
Confidence 223455899999999432110 0000 00000000000 111111 34556788999999998776
Q ss_pred hhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCc
Q 036539 447 AGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGY 526 (749)
Q Consensus 447 ~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~ 526 (749)
+...+.+ +. ..++.+|+||+|.+.+.+....
T Consensus 233 ~~l~~~~-------------------~~---~~~i~vvyp~vd~~~~~~~~~~--------------------------- 263 (463)
T PLN02949 233 SHIEALW-------------------RI---PERIKRVYPPCDTSGLQALPLE--------------------------- 263 (463)
T ss_pred HHHHHHc-------------------CC---CCCeEEEcCCCCHHHcccCCcc---------------------------
Confidence 5222110 11 3478899999997655221100
Q ss_pred cCCCCCcEEEEEecccCCCCHHHHHHHHHHhHc----cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 527 LADRKKPIIFSMARLDVVKNLTGLTEWYGKNKR----LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 527 l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~----~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
.+.+++.++++||+.+.||++.+++|++++.+ ..++++|+|+|++.. .++..+.++++++++++++.++
T Consensus 264 -~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~------~~~~~~~~eL~~la~~l~L~~~ 336 (463)
T PLN02949 264 -RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN------KEDEERLQKLKDRAKELGLDGD 336 (463)
T ss_pred -ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC------cccHHHHHHHHHHHHHcCCCCc
Confidence 02346789999999999999999999998754 246899999999854 1223456788999999999999
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccc-ccccc---CceEEEECCCCH
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPA-EIIVD---GVSGFHIDPYNG 678 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~-EiI~d---g~~G~lv~p~d~ 678 (749)
|.|+| .++.+++..+|+. ++++|.||..|+||++++|||+||+|||+++.||+. |++.+ |.+|++++ |+
T Consensus 337 V~f~g----~v~~~el~~ll~~-a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~ 409 (463)
T PLN02949 337 VEFHK----NVSYRDLVRLLGG-AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TV 409 (463)
T ss_pred EEEeC----CCCHHHHHHHHHh-CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CH
Confidence 99999 7778999999995 999999999999999999999999999999999985 77765 67899985 99
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+++|++|.++++ .+++.+++|+++|++++ ++|||+.+++++++.++.
T Consensus 410 ~~la~ai~~ll~---~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~~ 456 (463)
T PLN02949 410 EEYADAILEVLR---MRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIRP 456 (463)
T ss_pred HHHHHHHHHHHh---CCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHH
Confidence 999999976542 36888999999999999 779999999999998764
No 55
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=5.9e-33 Score=310.51 Aligned_cols=278 Identities=16% Similarity=0.105 Sum_probs=192.5
Q ss_pred CCCceEEEEcCCCc---hHHHH------HHHHcCCCcEEEEecCCcccc----cCCCcchhhhcC-----------cccc
Q 036539 365 GGKPDLIIGNYSDG---NLVAS------VMASKLGITQATIAHALEKTK----YEDSDVKWKELD-----------PKYH 420 (749)
Q Consensus 365 ~~~pDIIh~h~~~~---~lva~------lla~~~gvp~v~t~H~l~~~k----~~~s~~~~~~~~-----------~~y~ 420 (749)
..+|||||.|...+ ++... +..+..++|+|.|.|+.+... |+..-..|+.-. ....
T Consensus 92 ~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 92 TPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred ccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccc
Confidence 45899999998776 33211 112356799999999986432 111111222100 0001
Q ss_pred cchhhh-HH----HHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCC
Q 036539 421 FSCQFI-AD----TIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFP 495 (749)
Q Consensus 421 f~~~~~-~e----~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p 495 (749)
.+.+.. .. ....+.++.+|+.|...++... .... ..++.|||||+|++.+.+
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~---------------------~~~~--~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFN---------------------SLYG--PGRCRIINNGIDMATEAI 228 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHH---------------------HHcC--CCCEEEeCCCcCcccccc
Confidence 111111 11 1123456889999977665211 1112 468999999999754332
Q ss_pred CchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecc--cCCCCHHHHHHHHHHhHccCCCeEEEEEeccC
Q 036539 496 YTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARL--DVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFF 573 (749)
Q Consensus 496 ~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL--~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~ 573 (749)
..+.... . .++++++|+++||. .+.||++.|++|+.++. ++++|+|+|+++
T Consensus 229 ~~~~~~~----------------------~--~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~ 281 (405)
T PRK10125 229 LAELPPV----------------------R--ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFS 281 (405)
T ss_pred ccccccc----------------------c--cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCC
Confidence 2111000 0 03467889999994 47899999999999863 479999999875
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEE
Q 036539 574 DPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTF 653 (749)
Q Consensus 574 ~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVV 653 (749)
. . ...+|.++|+.. +..++..+|+. +|+||+||.+|+||++++||||||+|||
T Consensus 282 ~------------~-----------~~~~v~~~g~~~---~~~~l~~~y~~-aDvfV~pS~~Egfp~vilEAmA~G~PVV 334 (405)
T PRK10125 282 P------------F-----------TAGNVVNHGFET---DKRKLMSALNQ-MDALVFSSRVDNYPLILCEALSIGVPVI 334 (405)
T ss_pred c------------c-----------cccceEEecCcC---CHHHHHHHHHh-CCEEEECCccccCcCHHHHHHHcCCCEE
Confidence 4 0 024688888543 36788999994 9999999999999999999999999999
Q ss_pred EcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHH----HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 654 ATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNK----FSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 654 at~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~----ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+|+.||++|++.++ +|++++|+|++++|+++ ++...++ +.+++++++.++|||+.++++|+++|+.
T Consensus 335 at~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~---------~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~ 404 (405)
T PRK10125 335 ATHSDAAREVLQKS-GGKTVSEEEVLQLAQLS---------KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQN 404 (405)
T ss_pred EeCCCChHHhEeCC-cEEEECCCCHHHHHhcc---------CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 99999999999775 99999999999999854 4444443 3466889998999999999999999963
No 56
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=2.6e-32 Score=306.85 Aligned_cols=374 Identities=16% Similarity=0.210 Sum_probs=246.4
Q ss_pred EEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHc--CCcccceEEEEeCCCCCCCCC------ccCCc
Q 036539 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQ--GLYIKPQIVVVTRLIPDARGT------KCNQE 312 (749)
Q Consensus 241 Ivivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~--G~eV~~~i~V~T~~~p~~~g~------~~~~~ 312 (749)
|+++.|+.- ..||.++.+.+.|++| .++ ||+|+ |+|......... .|- .
T Consensus 3 ~~f~hp~~~----------~ggg~ervl~~a~~~l--------~~~~~~~~v~----i~t~~~~~~~~~~l~~~~~~f-~ 59 (419)
T cd03806 3 VGFFHPYCN----------AGGGGERVLWCAVRAL--------QKRYPNNIVV----IYTGDLDATPEEILEKVESRF-N 59 (419)
T ss_pred EEEECCCCC----------CCCCchHHHHHHHHHH--------HHhCCCcEEE----EECCCCCCCHHHHHHHHHHhc-C
Confidence 677765553 2369999999777765 444 88888 999875432100 011 0
Q ss_pred cccccCccceEEEEec-CccCCccccccccccccccc---hHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHH
Q 036539 313 LEPIEGTKHSNILRVP-FKTDKGILHRWVSRFDVYPY---LEGFAQDATTMILEFLGGKPDLIIGNYSDG--NLVASVMA 386 (749)
Q Consensus 313 ~e~i~~~~~~~I~rvp-~~~~~~~~~~~isr~~i~py---l~~f~~~~~~~l~~~l~~~pDIIh~h~~~~--~lva~lla 386 (749)
.+. . .+..++++. .+ .|+++ ..|+. +.++...+...+....+.+||||+.+...+ ..++.+
T Consensus 60 ~~~-~--~~~~~~~~~~~~-------~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~~-- 126 (419)
T cd03806 60 IEL-D--RPRIVFFLLKYR-------KLVEA-STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVRL-- 126 (419)
T ss_pred eec-C--CCceEEEEecce-------eeecc-ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHH--
Confidence 111 1 234444442 11 12222 12222 133443444343333244899999886443 222222
Q ss_pred HcCCCcEEEEecCCcccccCCCc--chhhh----------------cCcccccchhhhHHHHHhhhCCEEEeCCHHHHhh
Q 036539 387 SKLGITQATIAHALEKTKYEDSD--VKWKE----------------LDPKYHFSCQFIADTIAMNATDFIIASTFQEIAG 448 (749)
Q Consensus 387 ~~~gvp~v~t~H~l~~~k~~~s~--~~~~~----------------~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~ 448 (749)
..++|++..+|-..... +.. ...+. ..+...+......+...++.||.|+++|....+.
T Consensus 127 -~~~~~~i~y~h~P~~~~--d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~ 203 (419)
T cd03806 127 -LGGCPVGAYVHYPTIST--DMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNH 203 (419)
T ss_pred -hcCCeEEEEecCCcchH--HHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHH
Confidence 23789999999210000 000 00000 0000000001125677889999999999876652
Q ss_pred cCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccC
Q 036539 449 SKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLA 528 (749)
Q Consensus 449 ~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~ 528 (749)
..+. +.. ..++.||+||+|.+.|.+.... .
T Consensus 204 ~~~~--------------------~~~--~~~~~vi~~gvd~~~~~~~~~~----------------------------~ 233 (419)
T cd03806 204 IRSL--------------------WKR--NTKPSIVYPPCDVEELLKLPLD----------------------------E 233 (419)
T ss_pred HHHH--------------------hCc--CCCcEEEcCCCCHHHhcccccc----------------------------c
Confidence 2111 111 2478999999998776543210 0
Q ss_pred CCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC-----CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcE
Q 036539 529 DRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRN-----LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM 603 (749)
Q Consensus 529 ~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~-----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 603 (749)
..++++|+|+||+.+.||++.+++|+.++.+..+ +++|+|+|++... ++.++.+.++++++++++.++|
T Consensus 234 ~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~------~~~~~~~~L~~~~~~l~l~~~V 307 (419)
T cd03806 234 KTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE------DDEKRVEDLKLLAKELGLEDKV 307 (419)
T ss_pred ccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc------ccHHHHHHHHHHHHHhCCCCeE
Confidence 2456799999999999999999999999987654 4999999998641 2234567889999999999999
Q ss_pred EEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc-ccccc---cCceEEEECCCCHH
Q 036539 604 RWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP-AEIIV---DGVSGFHIDPYNGD 679 (749)
Q Consensus 604 ~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~-~EiI~---dg~~G~lv~p~d~e 679 (749)
.|+| .++.+++..+|+. +|++|+||..|+||++++|||+||+|||+++.||+ .|++. ++.+|++++ |++
T Consensus 308 ~f~g----~v~~~~l~~~l~~-adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~ 380 (419)
T cd03806 308 EFVV----NAPFEELLEELST-ASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAE 380 (419)
T ss_pred EEec----CCCHHHHHHHHHh-CeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHH
Confidence 9999 7889999999995 99999999999999999999999999999999886 47787 899999985 999
Q ss_pred HHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHHHHhCCHHHHHH
Q 036539 680 ESSDKIADFFEACKVDP-TYWNKFSTEGLKRINECYTWKIYAN 721 (749)
Q Consensus 680 ~lA~aI~~~l~~l~~dp-~~~~~ms~~a~~~v~~~ysw~~~a~ 721 (749)
++|++|.+++ +++ ..++.+ .++++++.++|||+.+.+
T Consensus 381 ~la~ai~~ll----~~~~~~~~~~-~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 381 EYAEAIEKIL----SLSEEERLRI-RRAARSSVKRFSDEEFER 418 (419)
T ss_pred HHHHHHHHHH----hCCHHHHHHH-HHHHHHHHHhhCHHHhcc
Confidence 9999997654 544 445555 555556779999998753
No 57
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=100.00 E-value=1.2e-31 Score=287.87 Aligned_cols=284 Identities=26% Similarity=0.392 Sum_probs=231.2
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCH
Q 036539 365 GGKPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTF 443 (749)
Q Consensus 365 ~~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~ 443 (749)
..+||+||+|+... ...+..+++..++|++.+.|+.......... .........++.+|.+++.|.
T Consensus 91 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-------------~~~~~~~~~~~~~d~ii~~s~ 157 (377)
T cd03798 91 RFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-------------LLRALLRRALRRADAVIAVSE 157 (377)
T ss_pred cCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-------------hHHHHHHHHHhcCCeEEeCCH
Confidence 45999999997654 5666777788899999999986432211110 111234557889999999998
Q ss_pred HHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhh
Q 036539 444 QEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEH 523 (749)
Q Consensus 444 ~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 523 (749)
...+...+ .+ ....++.++|||+|...+.+...... ..
T Consensus 158 ~~~~~~~~--------------------~~--~~~~~~~~i~~~~~~~~~~~~~~~~~--------------------~~ 195 (377)
T cd03798 158 ALADELKA--------------------LG--IDPEKVTVIPNGVDTERFSPADRAEA--------------------RK 195 (377)
T ss_pred HHHHHHHH--------------------hc--CCCCceEEcCCCcCcccCCCcchHHH--------------------Hh
Confidence 77662111 11 22678999999999988876543221 01
Q ss_pred cCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcE
Q 036539 524 IGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM 603 (749)
Q Consensus 524 ~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 603 (749)
.+. ..+++.|+++|++.+.||++.+++++..+.+..++++|+|+|.+.. .+.+.+.++++++.++|
T Consensus 196 ~~~--~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~------------~~~~~~~~~~~~~~~~v 261 (377)
T cd03798 196 LGL--PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL------------REALEALAAELGLEDRV 261 (377)
T ss_pred ccC--CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc------------hHHHHHHHHhcCCcceE
Confidence 122 4567899999999999999999999999987778999999999876 56677888888999999
Q ss_pred EEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHH
Q 036539 604 RWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSD 683 (749)
Q Consensus 604 ~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~ 683 (749)
.+.| .++.+++..+++. ||++++||..|++|++++|||+||+|||+++.|+..|++.++.+|+++++.|++++++
T Consensus 262 ~~~g----~~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 336 (377)
T cd03798 262 TFLG----AVPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAE 336 (377)
T ss_pred EEeC----CCCHHHHHHHHHh-cCeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHH
Confidence 9999 7788999999995 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 684 KIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 684 aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+|.+++ +++.. +++.++++.+.++|||+.+++++.++++
T Consensus 337 ~i~~~~----~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 337 AILRLL----ADPWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred HHHHHh----cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 996554 77776 7889999999999999999999999875
No 58
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=8.3e-33 Score=308.46 Aligned_cols=284 Identities=13% Similarity=0.123 Sum_probs=204.6
Q ss_pred CCCceEEEEcCCCchHHHHHHH-HcCCCcEEEEecCCcccccCCCc--chhhhcCcccccc--hhhhHHHHHhhhCCEEE
Q 036539 365 GGKPDLIIGNYSDGNLVASVMA-SKLGITQATIAHALEKTKYEDSD--VKWKELDPKYHFS--CQFIADTIAMNATDFII 439 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lva~lla-~~~gvp~v~t~H~l~~~k~~~s~--~~~~~~~~~y~f~--~~~~~e~~a~~~aD~II 439 (749)
..++|+||++++..+ ..+. +..++|.+.+.|+++...|.... ..+. ....|+.. .....|+..++.+|.|+
T Consensus 102 ~~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~vi 177 (397)
T TIGR03087 102 AEPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWP-LRWIYRREGRLLLAYERAIAARFDAAT 177 (397)
T ss_pred hCCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcc-hhHHHHHHHHHHHHHHHHHHhhCCeEE
Confidence 358999999875432 2222 34689999999987533221100 0000 00001100 01124667889999999
Q ss_pred eCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccc
Q 036539 440 ASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKED 519 (749)
Q Consensus 440 t~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~ 519 (749)
++|..+.+...+. .+.. ..++.+||||+|.+.|.|......
T Consensus 178 ~~S~~~~~~l~~~-------------------~~~~--~~~v~vipngvd~~~f~~~~~~~~------------------ 218 (397)
T TIGR03087 178 FVSRAEAELFRRL-------------------APEA--AGRITAFPNGVDADFFSPDRDYPN------------------ 218 (397)
T ss_pred EcCHHHHHHHHHh-------------------CCCC--CCCeEEeecccchhhcCCCccccC------------------
Confidence 9999887622111 1111 468999999999988866432110
Q ss_pred hhhhcCccCCCCCcEEEEEecccCCCCHHHHH----HHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHH
Q 036539 520 NNEHIGYLADRKKPIIFSMARLDVVKNLTGLT----EWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALME 595 (749)
Q Consensus 520 ~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~Li----eA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~ 595 (749)
.+ ++++++|+|+||+++.||++.++ +++..+.+..|+++|+|+|+|+. +.+ +
T Consensus 219 -----~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~-------------~~~----~ 274 (397)
T TIGR03087 219 -----PY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS-------------PAV----R 274 (397)
T ss_pred -----CC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh-------------HHH----H
Confidence 11 34567999999999999999988 56666766778999999999865 122 2
Q ss_pred HcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEEC
Q 036539 596 KYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL-YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHID 674 (749)
Q Consensus 596 ~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~-~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~ 674 (749)
+++...+|+|+|. ++ ++..+++. +|++|+||. .||+|++++|||+||+|||+|+.|+. .+...+.+|++++
T Consensus 275 ~l~~~~~V~~~G~----v~--~~~~~~~~-adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~ 346 (397)
T TIGR03087 275 ALAALPGVTVTGS----VA--DVRPYLAH-AAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA 346 (397)
T ss_pred HhccCCCeEEeee----cC--CHHHHHHh-CCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC
Confidence 3344577999994 43 57889985 999999997 69999999999999999999997643 3334456799986
Q ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 675 PYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 675 p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+|++++|++|.+ +.+|++.+++|+++|++++.++|||+.+++++.+++.
T Consensus 347 -~~~~~la~ai~~----ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 347 -ADPADFAAAILA----LLANPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred -CCHHHHHHHHHH----HHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 899999999965 4589999999999999999999999999999999875
No 59
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=100.00 E-value=1.3e-31 Score=285.54 Aligned_cols=351 Identities=18% Similarity=0.204 Sum_probs=249.1
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCc
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGT 319 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~ 319 (749)
||+++++... .||...++. .|++.|.++||+|. +++............ ....
T Consensus 1 kIl~~~~~~~-----------~gG~~~~~~--------~l~~~l~~~g~~v~----v~~~~~~~~~~~~~~----~~~~- 52 (353)
T cd03811 1 KILFVIPSLG-----------GGGAERVLL--------NLANGLDKRGYDVT----LVVLRDEGDYLELLP----SNVK- 52 (353)
T ss_pred CeEEEeeccc-----------CCCcchhHH--------HHHHHHHhcCceEE----EEEcCCCCccccccc----cchh-
Confidence 5788875543 489999999 77777889999999 877653222110000 0000
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCC-CchHHHHHHHHcCCCcEEEEec
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYS-DGNLVASVMASKLGITQATIAH 398 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~-~~~lva~lla~~~gvp~v~t~H 398 (749)
.......... .. ....+...+.+.+.. .+||+||++.. ...+++.+..+. ++|.+.+.|
T Consensus 53 -~~~~~~~~~~-----------~~----~~~~~~~~~~~~~~~---~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~ 112 (353)
T cd03811 53 -LIPVRVLKLK-----------SL----RDLLAILRLRRLLRK---EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEH 112 (353)
T ss_pred -hhceeeeecc-----------cc----cchhHHHHHHHHHHh---cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEc
Confidence 0000000000 00 001122222222322 38999999988 555555554444 899999999
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
+............+ ......++.+|.+++.|....+...+. .+.+ .
T Consensus 113 ~~~~~~~~~~~~~~-------------~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~~--~ 158 (353)
T cd03811 113 NSLSLELKRKLRLL-------------LLIRKLYRRADKIVAVSEGVKEDLLKL-------------------LGIP--P 158 (353)
T ss_pred CcchhhhccchhHH-------------HHHHhhccccceEEEeccchhhhHHHh-------------------hcCC--c
Confidence 87432211100000 234557889999999997665511111 1111 5
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
.++.+||||+|.+.+.+...... ..+. +.++++|+++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~---------------------~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 159 DKIEVIYNPIDIEEIRALAEEPL---------------------ELGI--PPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred cccEEecCCcChhhcCcccchhh---------------------hcCC--CCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 68999999999887765433211 0122 466789999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCC
Q 036539 559 RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAF 638 (749)
Q Consensus 559 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~f 638 (749)
...++++|+++|.++. .+.+.+.++++++.++|.|.|.. +++..+++. +|++++||.+|++
T Consensus 216 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~i~ps~~e~~ 276 (353)
T cd03811 216 KEGPDARLVILGDGPL------------REELEALAKELGLADRVHFLGFQ------SNPYPYLKA-ADLFVLSSRYEGF 276 (353)
T ss_pred hcCCCceEEEEcCCcc------------HHHHHHHHHhcCCCccEEEeccc------CCHHHHHHh-CCEEEeCcccCCC
Confidence 8778999999999876 56677889999999999999943 257788885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 036539 639 GLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYT 715 (749)
Q Consensus 639 GLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ys 715 (749)
|++++|||+||+|||+|+.||..|++.++.+|+++++.|.+++++.+..+ ..+..+++.++++++++++.+.++|+
T Consensus 277 ~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 277 PNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALAL-LDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred CcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHH-HhccCChHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999996555433 56789999999999999999988886
No 60
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=100.00 E-value=1.1e-31 Score=306.77 Aligned_cols=279 Identities=20% Similarity=0.218 Sum_probs=210.8
Q ss_pred CCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCc--chhhhcCcccccchhhhHHHHHhhhCCEEEeCC
Q 036539 365 GGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSD--VKWKELDPKYHFSCQFIADTIAMNATDFIIAST 442 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~--~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S 442 (749)
..++||+|++.+.....+ ++.....+|.+.++|+-+........ ..|. ..|.+ ....++.+|.||++|
T Consensus 209 ~~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~---~~y~~------~~~~~~~~D~iI~~S 278 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWN---NYYEY------QFSNADYIDFFITAT 278 (500)
T ss_pred CCCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHH---HHHHH------HHhchhhCCEEEECC
Confidence 458999999876653333 44556689999999975432211111 1121 11111 122457789999999
Q ss_pred HHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhh
Q 036539 443 FQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNE 522 (749)
Q Consensus 443 ~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 522 (749)
....+.+.+...+| +.. .+++.+||||++...+.|..
T Consensus 279 ~~~~~~l~~~~~~~----------------~~~--~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 279 DIQNQILKNQFKKY----------------YNI--EPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred HHHHHHHHHHhhhh----------------cCC--CCcEEEEcCCCcccccCccc-------------------------
Confidence 87665333222222 112 56899999998755433210
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
...+..|+++||+.+.||++.|++|+.++.+..|+++|+|+|+|+. .+.++++++++++.++
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~------------~~~l~~~i~~~~l~~~ 377 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE------------KQKLQKIINENQAQDY 377 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 1234579999999999999999999999998889999999999976 5789999999999999
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECC----CC
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG-GPAEIIVDGVSGFHIDP----YN 677 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G-G~~EiI~dg~~G~lv~p----~d 677 (749)
|.|+| .. ++..+++ .+|++|+||..|+||++++||||||+|||+|+.+ |++|+|.+|.+|+++++ +|
T Consensus 378 V~f~G----~~---~~~~~~~-~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 378 IHLKG----HR---NLSEVYK-DYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDD 449 (500)
T ss_pred EEEcC----CC---CHHHHHH-hCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccc
Confidence 99999 33 3556667 5999999999999999999999999999999986 89999999999999984 33
Q ss_pred ----HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 678 ----GDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 678 ----~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
++++|++|.+ +++ ++.+++|+++|++.+ ++|||+.+++++.++++
T Consensus 450 ~~~~~~~la~~I~~----ll~-~~~~~~~~~~a~~~a-~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 450 EDQIITALAEKIVE----YFN-SNDIDAFHEYSYQIA-EGFLTANIIEKWKKLVR 498 (500)
T ss_pred hhHHHHHHHHHHHH----HhC-hHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHh
Confidence 6777777754 444 557999999999977 78999999999998875
No 61
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=100.00 E-value=3.4e-31 Score=296.80 Aligned_cols=276 Identities=15% Similarity=0.200 Sum_probs=218.2
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHcCCCc-EEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCC
Q 036539 365 GGKPDLIIGNYSDG-NLVASVMASKLGIT-QATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIAST 442 (749)
Q Consensus 365 ~~~pDIIh~h~~~~-~lva~lla~~~gvp-~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S 442 (749)
..++|++|+++... +..+.++.++.+.+ ++.++|+..... ......+ .......++.+|.|+++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--------~~~~~~~-----~~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--------DRYPSGY-----IPLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--------hhccccc-----hHHHHHHHhcCCEEEECC
Confidence 46788999876554 44555667777776 899999753211 1111111 112234578999999999
Q ss_pred HHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhh
Q 036539 443 FQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNE 522 (749)
Q Consensus 443 ~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 522 (749)
....+...+. .+. ...++.+++||++...+.+..
T Consensus 192 ~~~~~~l~~~-------------------~~~--~~~ki~vi~~gv~~~~~~~~~------------------------- 225 (407)
T cd04946 192 EQGRNYLQKR-------------------YPA--YKEKIKVSYLGVSDPGIISKP------------------------- 225 (407)
T ss_pred HHHHHHHHHH-------------------CCC--ccccEEEEECCcccccccCCC-------------------------
Confidence 8876622211 122 267899999999987654320
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC--CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRN--LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~--~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 600 (749)
...+++.|+++||+.+.||++.+++|+.++.+.+| +++++++|+|+. .+.+++++++.+..
T Consensus 226 -----~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~------------~~~l~~~~~~~~~~ 288 (407)
T cd04946 226 -----SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL------------EDTLKELAESKPEN 288 (407)
T ss_pred -----CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH------------HHHHHHHHHhcCCC
Confidence 03456789999999999999999999999988765 466788999876 56788888888888
Q ss_pred CcEEEecCccCcCChHHHHHHHHc-cCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCC-CH
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPY-NG 678 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~-d~ 678 (749)
++|.|+| .++.+++..+++. .+|++|+||..||||++++|||+||+|||||+.||..|+|.++++|+++++. |+
T Consensus 289 ~~V~f~G----~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 289 ISVNFTG----ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred ceEEEec----CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 8999999 7778999999974 3789999999999999999999999999999999999999999999999875 89
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKML 724 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll 724 (749)
++++++|.++ .+||+.+++|+++|+++++++|||+...+++.
T Consensus 365 ~~la~~I~~l----l~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKF----IDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHH----HhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999999654 47999999999999999999999999988875
No 62
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.98 E-value=3.5e-30 Score=288.92 Aligned_cols=438 Identities=17% Similarity=0.157 Sum_probs=293.0
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
|||+.+|....|- -++||....+- .|.+.|++.|++|. |+.+.++ .....+....+.+..
T Consensus 1 M~Il~v~~E~~p~-------vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~-~~~~~~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFPF-------VKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYP-KVQKEWRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecCc-------cccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCch-hhhhhhccccceeeE
Confidence 7899998887753 47999888888 66667899999999 8888877 322222222111110
Q ss_pred -------ccceEEEEecCcc--CCc-cc--ccccccc--ccccch---HHHH--HHHHHHHHHHcC--CCceEEEEcCCC
Q 036539 319 -------TKHSNILRVPFKT--DKG-IL--HRWVSRF--DVYPYL---EGFA--QDATTMILEFLG--GKPDLIIGNYSD 377 (749)
Q Consensus 319 -------~~~~~I~rvp~~~--~~~-~~--~~~isr~--~i~pyl---~~f~--~~~~~~l~~~l~--~~pDIIh~h~~~ 377 (749)
.....+....... ..- ++ ....+|. ..+.+. ++|+ ..+.-++..... ..|||||+|+|.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWq 140 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQ 140 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHH
Confidence 0001111111100 000 11 1112221 122211 2222 222233333223 479999999999
Q ss_pred chHHHHHHHHc----CCCcEEEEecCCcccccCC-CcchhhhcCc------ccccchhhhHHHHHhhhCCEEEeCCHHHH
Q 036539 378 GNLVASVMASK----LGITQATIAHALEKTKYED-SDVKWKELDP------KYHFSCQFIADTIAMNATDFIIASTFQEI 446 (749)
Q Consensus 378 ~~lva~lla~~----~gvp~v~t~H~l~~~k~~~-s~~~~~~~~~------~y~f~~~~~~e~~a~~~aD~IIt~S~~~~ 446 (749)
.++++.+++.. ..+|.|+|+|++....... .-..+..+.. ...+..+....+..+..||.|.|+|+..+
T Consensus 141 t~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa 220 (487)
T COG0297 141 TGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYA 220 (487)
T ss_pred HHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHH
Confidence 99999999884 4799999999985443221 1111111110 01111223345567888999999999888
Q ss_pred hhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCc
Q 036539 447 AGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGY 526 (749)
Q Consensus 447 ~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~ 526 (749)
.... .-.| +..+-++. .....++.-|-||+|.+.+.|.++......--....+.+.-+.....+++|+
T Consensus 221 ~Ei~--t~~~----g~gl~g~l------~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL 288 (487)
T COG0297 221 GEIY--TPEY----GEGLEGLL------SWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGL 288 (487)
T ss_pred Hhhc--cccc----cccchhhh------hhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCC
Confidence 7443 1112 11122211 1113578889999999999987765322111111122345556667788999
Q ss_pred cCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEe
Q 036539 527 LADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWI 606 (749)
Q Consensus 527 l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 606 (749)
..+.+.|++.++||++.+||++.+++++..+.+.. ++++|.|.|.. ...+.+..+++.+.. ++...
T Consensus 289 ~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~----------~le~~~~~la~~~~~--~~~~~ 354 (487)
T COG0297 289 DVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDP----------ELEEALRALASRHPG--RVLVV 354 (487)
T ss_pred CCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcH----------HHHHHHHHHHHhcCc--eEEEE
Confidence 66678899999999999999999999999998754 99999999944 456778888888754 44444
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc--------CceEEEECCCCH
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD--------GVSGFHIDPYNG 678 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d--------g~~G~lv~p~d~ 678 (749)
- ..+..-....++ .+|++++||++|+||++-++||..|+++|+...||.+|.|.+ ..+||++.+.++
T Consensus 355 i----~~~~~la~~i~a-gaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~ 429 (487)
T COG0297 355 I----GYDEPLAHLIYA-GADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNP 429 (487)
T ss_pred e----eecHHHHHHHHh-cCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCH
Confidence 3 333434444555 699999999999999999999999999999999999999975 479999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
++++.+|..++.-...++..|+.+..+++. ..|+|+..+++|.++|+..
T Consensus 430 ~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 430 DHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHH
Confidence 999999999876555555559999999887 6899999999999999875
No 63
>PLN02275 transferase, transferring glycosyl groups
Probab=99.97 E-value=2.8e-29 Score=278.02 Aligned_cols=249 Identities=14% Similarity=0.101 Sum_probs=183.3
Q ss_pred CCCceEEEEcCCCc---hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeC
Q 036539 365 GGKPDLIIGNYSDG---NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIAS 441 (749)
Q Consensus 365 ~~~pDIIh~h~~~~---~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~ 441 (749)
..+||+||+|.+.. ..++.++++..++|++++.|++........ .......+.+ ....++..++.+|.||++
T Consensus 98 ~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~---~~~~~~~~~~--~~~~e~~~~~~ad~ii~~ 172 (371)
T PLN02275 98 IPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALS---LGRSHPLVRL--YRWYERHYGKMADGHLCV 172 (371)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcc---cCCCCHHHHH--HHHHHHHHHhhCCEEEEC
Confidence 46999999987553 356667777889999999998631110000 0000000111 112466788999999999
Q ss_pred CHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchh
Q 036539 442 TFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNN 521 (749)
Q Consensus 442 S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~ 521 (749)
|....+...+ ..|+ ++.+|+||. .+.|.|......
T Consensus 173 S~~~~~~l~~-------------------~~g~-----~i~vi~n~~-~~~f~~~~~~~~-------------------- 207 (371)
T PLN02275 173 TKAMQHELDQ-------------------NWGI-----RATVLYDQP-PEFFRPASLEIR-------------------- 207 (371)
T ss_pred CHHHHHHHHH-------------------hcCC-----CeEEECCCC-HHHcCcCCchhc--------------------
Confidence 9887662110 0133 278999995 455655432110
Q ss_pred hhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH-----------------ccCCCeEEEEEeccCCCCCCcchhHH
Q 036539 522 EHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK-----------------RLRNLVNLVIVGAFFDPSKSKDREET 584 (749)
Q Consensus 522 ~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~-----------------~~~~~v~LvIVG~g~~~~~~~d~ee~ 584 (749)
.. ++.+.+++++||+.+.||++.+++|+..+. +..++++|+|+|+|+.
T Consensus 208 --~~---~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~---------- 272 (371)
T PLN02275 208 --LR---PNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGPQ---------- 272 (371)
T ss_pred --cc---CCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCCC----------
Confidence 00 223457889999999999999999998874 2357899999999988
Q ss_pred HHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC---CCCCcHHHHHHHHcCCcEEEcCccccc
Q 036539 585 AEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL---YEAFGLTVIEAMNCGLPTFATNQGGPA 661 (749)
Q Consensus 585 ~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~---~E~fGLtvlEAMa~GlPVVat~~GG~~ 661 (749)
.++++++++++++.+ +.|.+. .++.+++..+|+. +|++|+|+. .|+||++++||||||+|||+|+.||.+
T Consensus 273 --~~~l~~~~~~~~l~~-v~~~~~---~~~~~~~~~~l~~-aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~ 345 (371)
T PLN02275 273 --KAMYEEKISRLNLRH-VAFRTM---WLEAEDYPLLLGS-ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIG 345 (371)
T ss_pred --HHHHHHHHHHcCCCc-eEEEcC---CCCHHHHHHHHHh-CCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChH
Confidence 678999999999976 888661 4678999999994 999998642 489999999999999999999999999
Q ss_pred cccccCceEEEECCCCHHHHHHHHHH
Q 036539 662 EIIVDGVSGFHIDPYNGDESSDKIAD 687 (749)
Q Consensus 662 EiI~dg~~G~lv~p~d~e~lA~aI~~ 687 (749)
|+|.++.+|++++ |++++|++|.+
T Consensus 346 eiv~~g~~G~lv~--~~~~la~~i~~ 369 (371)
T PLN02275 346 ELVKDGKNGLLFS--SSSELADQLLE 369 (371)
T ss_pred HHccCCCCeEEEC--CHHHHHHHHHH
Confidence 9999999999997 79999999854
No 64
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.97 E-value=2.8e-29 Score=284.86 Aligned_cols=273 Identities=10% Similarity=0.108 Sum_probs=196.0
Q ss_pred CCceEEEEcCCCc-hHH--HHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCc--ccccchhhhHHHHHhhhCCEEEe
Q 036539 366 GKPDLIIGNYSDG-NLV--ASVMASKLGITQATIAHALEKTKYEDSDVKWKELDP--KYHFSCQFIADTIAMNATDFIIA 440 (749)
Q Consensus 366 ~~pDIIh~h~~~~-~lv--a~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~--~y~f~~~~~~e~~a~~~aD~IIt 440 (749)
..|||||.+.+.. ++. |..++++++ |+|.++|+-... |...... ...+..+.........++|.|++
T Consensus 433 f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~e-------Yl~~y~~g~L~~~llk~l~~~v~r~hcD~VIa 504 (794)
T PLN02501 433 KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLE-------YIKREKNGALQAFFVKHINNWVTRAYCHKVLR 504 (794)
T ss_pred cCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHH-------HHhHhcchhHHHHHHHHHHHHHHHhhCCEEEc
Confidence 4899999998875 666 888889999 899999986432 1111000 00000000001111122899999
Q ss_pred CCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccch
Q 036539 441 STFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDN 520 (749)
Q Consensus 441 ~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 520 (749)
.|..... +. ...+..| ||||++.|.|......+
T Consensus 505 PS~atq~--------------------------L~--~~vI~nV-nGVDte~F~P~~r~~~~------------------ 537 (794)
T PLN02501 505 LSAATQD--------------------------LP--KSVICNV-HGVNPKFLKIGEKVAEE------------------ 537 (794)
T ss_pred CCHHHHH--------------------------hc--ccceeec-ccccccccCCcchhHHH------------------
Confidence 9955442 00 1112222 69999999887553322
Q ss_pred hhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC
Q 036539 521 NEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600 (749)
Q Consensus 521 ~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 600 (749)
+.+|. +...+.++|+||+.+.||++.|++|++.+....++++|+|+|+|+. .+.+++++.++++
T Consensus 538 -r~lgi--~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~------------reeLe~la~eLgL- 601 (794)
T PLN02501 538 -RELGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGED------------AHEVQRAAKRLDL- 601 (794)
T ss_pred -HhcCC--ccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCcc------------HHHHHHHHHHcCC-
Confidence 12343 2333458999999999999999999999987778999999999988 6788888998887
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHH
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDE 680 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~ 680 (749)
+|.|+|.+. +...+|+ ++||||+||.+|+||++++||||||+|||+|+.||. +++.++.+|+++ +|+++
T Consensus 602 -~V~FLG~~d------d~~~lya-saDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~Ea 670 (794)
T PLN02501 602 -NLNFLKGRD------HADDSLH-GYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSED 670 (794)
T ss_pred -EEEecCCCC------CHHHHHH-hCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHH
Confidence 489999433 3446777 599999999999999999999999999999999985 447778888865 69999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 681 SSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 681 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
++++|.+++ .|+..+..+++ ...|||+.+++++++...+-
T Consensus 671 fAeAI~~LL----sd~~~rl~~~a------~~~~SWeAaadrLle~~~~~ 710 (794)
T PLN02501 671 FVAKVKEAL----ANEPQPLTPEQ------RYNLSWEAATQRFMEYSDLD 710 (794)
T ss_pred HHHHHHHHH----hCchhhhHHHH------HhhCCHHHHHHHHHHhhccc
Confidence 999997655 56554333321 24899999999999977654
No 65
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=9.7e-30 Score=278.06 Aligned_cols=264 Identities=20% Similarity=0.249 Sum_probs=190.1
Q ss_pred CCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCC------cchhhhcCcccccchhhhHHHHHhhhCCEE
Q 036539 365 GGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDS------DVKWKELDPKYHFSCQFIADTIAMNATDFI 438 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s------~~~~~~~~~~y~f~~~~~~e~~a~~~aD~I 438 (749)
..++|+||++.... +..+.+..++|.+..+|+.....+... ...+......+.+......+...++.+|.+
T Consensus 81 ~~~~D~v~~~~~~~---~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 81 LSGYDLVISSSHAV---AKGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred ccCCCEEEEcCcHH---hccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 45899999875432 112224567888888886422111100 000000000000111112345568999999
Q ss_pred EeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhcccc
Q 036539 439 IASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKE 518 (749)
Q Consensus 439 It~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~ 518 (749)
+++|...++...+ .+..+..+|+||+|.+.|.+..
T Consensus 158 i~~S~~~~~~~~~------------------------~~~~~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 158 IANSRFVARRIKK------------------------YYGRDATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred EECCHHHHHHHHH------------------------HhCCCcEEECCCCCHhhcCcCC---------------------
Confidence 9999887762110 0133567999999987665421
Q ss_pred chhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcC
Q 036539 519 DNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQ 598 (749)
Q Consensus 519 ~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~ 598 (749)
..++.++++||+.+.||++.+++|+.+++ ++|+|+|+|+. .+.+++ +
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l~ivG~g~~------------~~~l~~-----~ 239 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRLVVIGDGPE------------LDRLRA-----K 239 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcEEEEECChh------------HHHHHh-----h
Confidence 23457999999999999999999998763 78999999876 333333 4
Q ss_pred CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH
Q 036539 599 LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNG 678 (749)
Q Consensus 599 L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~ 678 (749)
..++|+|+| .++.+++..+++. +|++|+||. |+||++++|||+||+|||+++.||..|++.++.+|++++++|+
T Consensus 240 ~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 240 AGPNVTFLG----RVSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred cCCCEEEec----CCCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 568999999 7788999999995 999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKM 723 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~l 723 (749)
++++++|..++ +|++ .+.++.++++ ++|+|+.+.+++
T Consensus 314 ~~la~~i~~l~----~~~~---~~~~~~~~~~-~~~~~~~~~~~~ 350 (351)
T cd03804 314 ESLAAAVERFE----KNED---FDPQAIRAHA-ERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHHHH----hCcc---cCHHHHHHHH-HhcCHHHHHHHh
Confidence 99999996544 6773 2344455555 679999998875
No 66
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.97 E-value=3.1e-29 Score=276.04 Aligned_cols=273 Identities=22% Similarity=0.248 Sum_probs=211.5
Q ss_pred CCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCc-chhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 366 GKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSD-VKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~-~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
.++|+||++....... .++......+.+.++|+.+........ ..|+. .+. .....++.+|.||++|..
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~---~~~------~~~~~~~~~d~ii~~s~~ 167 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINN---FYE------YVFENLDKVDGVIVATEQ 167 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccch---hhH------HHHhChhhCCEEEEccHH
Confidence 6899999988765433 234444556678889976432211110 11111 111 111236789999999987
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
..+...+.. +. ..++.+||||++...+.+....
T Consensus 168 ~~~~l~~~~-------------------~~---~~~v~~ip~g~~~~~~~~~~~~------------------------- 200 (372)
T cd04949 168 QKQDLQKQF-------------------GN---YNPIYTIPVGSIDPLKLPAQFK------------------------- 200 (372)
T ss_pred HHHHHHHHh-------------------CC---CCceEEEcccccChhhcccchh-------------------------
Confidence 766322110 11 2348899999998776543200
Q ss_pred CccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE
Q 036539 525 GYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR 604 (749)
Q Consensus 525 g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 604 (749)
...+..|+++||+.+.||++.+++++.++.+..|+++|+|+|.|.. ...+.++++++++.++|.
T Consensus 201 ----~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~ 264 (372)
T cd04949 201 ----QRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE------------EEKLKELIEELGLEDYVF 264 (372)
T ss_pred ----hcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch------------HHHHHHHHHHcCCcceEE
Confidence 2445689999999999999999999999998889999999999976 456777888899999999
Q ss_pred EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHHH
Q 036539 605 WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG-GPAEIIVDGVSGFHIDPYNGDESSD 683 (749)
Q Consensus 605 flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G-G~~EiI~dg~~G~lv~p~d~e~lA~ 683 (749)
|.|+. .++.++++. +|++|+||..|+||++++|||+||+|||+++.+ |+.+++.++.+|++++++|++++++
T Consensus 265 ~~g~~------~~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~ 337 (372)
T cd04949 265 LKGYT------RDLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAE 337 (372)
T ss_pred EcCCC------CCHHHHHhh-hhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHH
Confidence 99943 368888885 999999999999999999999999999999987 8999999999999999999999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 036539 684 KIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKM 723 (749)
Q Consensus 684 aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~l 723 (749)
+|..+ ++|++.+++|++++++.+ ++|||+.+++++
T Consensus 338 ~i~~l----l~~~~~~~~~~~~a~~~~-~~~s~~~~~~~w 372 (372)
T cd04949 338 AIIEL----LNDPKLLQKFSEAAYENA-ERYSEENVWEKW 372 (372)
T ss_pred HHHHH----HcCHHHHHHHHHHHHHHH-HHhhHHHHHhcC
Confidence 99654 489999999999999995 899999998763
No 67
>PHA01630 putative group 1 glycosyl transferase
Probab=99.97 E-value=1.1e-28 Score=268.70 Aligned_cols=258 Identities=12% Similarity=0.098 Sum_probs=186.8
Q ss_pred EcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHH-hhhCCEEEeCCHHHHhhcCC
Q 036539 373 GNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIA-MNATDFIIASTFQEIAGSKD 451 (749)
Q Consensus 373 ~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a-~~~aD~IIt~S~~~~~~~~~ 451 (749)
.|+....+..+-...+.|+|+++++|+.. +... ..+... .+.+|.||++|....+...
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~------------------~l~~--~~~~~~~~~~ad~ii~~S~~~~~~l~- 110 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTD------------------AISH--TALYFFRNQPVDEIVVPSQWSKNAFY- 110 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeec------------------hhhH--HHHHHHhhccCCEEEECCHHHHHHHH-
Confidence 34333334444444567899999999721 1111 122334 6789999999988776211
Q ss_pred CCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCC
Q 036539 452 RPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRK 531 (749)
Q Consensus 452 ~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~ 531 (749)
..|++. ..++.+||||+|.+.|.+.... ..+
T Consensus 111 -------------------~~g~~~-~~~i~vIpNGVd~~~f~~~~~~-----------------------------~~~ 141 (331)
T PHA01630 111 -------------------TSGLKI-PQPIYVIPHNLNPRMFEYKPKE-----------------------------KPH 141 (331)
T ss_pred -------------------HcCCCC-CCCEEEECCCCCHHHcCCCccc-----------------------------cCC
Confidence 123321 3589999999998877653210 123
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC
Q 036539 532 KPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD 611 (749)
Q Consensus 532 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 611 (749)
+.+++++||+.+.||++.|++|++++.+..++++|+|+|++.. ..++ .++.+ +.|
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~------------~~~l------~~~~~---~~~---- 196 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNML------------DPRL------FGLNG---VKT---- 196 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCccc------------chhh------ccccc---eec----
Confidence 4567788899999999999999999988778999999997644 1111 12222 234
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC----------------
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDP---------------- 675 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p---------------- 675 (749)
.++.+++..+|+. +|+||+||.+|+||++++||||||+|||+|+.||..|++.++.+|+++++
T Consensus 197 ~v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~ 275 (331)
T PHA01630 197 PLPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGY 275 (331)
T ss_pred cCCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccc
Confidence 5678999999995 99999999999999999999999999999999999999999988887753
Q ss_pred ---CCHHHHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 676 ---YNGDESSDKIADFFEACKVD--PTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 676 ---~d~e~lA~aI~~~l~~l~~d--p~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
.|.+++++++.+.+ .| ++.++++..++.+.+.++|||+.++++++++|+.|
T Consensus 276 ~v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~~ 331 (331)
T PHA01630 276 FLDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEKY 331 (331)
T ss_pred ccCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 26778888876544 44 34444445555555669999999999999999765
No 68
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.96 E-value=2.3e-27 Score=267.28 Aligned_cols=333 Identities=15% Similarity=0.140 Sum_probs=209.4
Q ss_pred CCCceEEEEcCCCchHHHHHHH-HcCCCcEEEEecCCcccccCCC---cch-------hhhcCcccccchhhhHHHHHhh
Q 036539 365 GGKPDLIIGNYSDGNLVASVMA-SKLGITQATIAHALEKTKYEDS---DVK-------WKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lva~lla-~~~gvp~v~t~H~l~~~k~~~s---~~~-------~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..++||+|+|.|..+..+..++ +..++|+|+|.|+.....+... +++ +........+..+...|+.+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 4589999999999988888888 5678999999998866553111 122 1111122333445567888999
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHh
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEEL 513 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~ 513 (749)
.||.+||+|...+...+.. .|.+ ..+ |||||+|.+.|.+..+.......-..+|.+.
T Consensus 226 ~Ad~fttVS~it~~E~~~L-------------------l~~~--pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f 282 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHL-------------------LKRK--PDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEF 282 (590)
T ss_pred hCCEEEECChHHHHHHHHH-------------------hCCC--CCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHH
Confidence 9999999999887743322 1222 334 9999999999987654332211111222221
Q ss_pred hccccchhhhcCccCCCCCcEEEE-EecccC-CCCHHHHHHHHHHhHcc----CCC---eEEEEEeccCCCCCCcchhH-
Q 036539 514 LYNKEDNNEHIGYLADRKKPIIFS-MARLDV-VKNLTGLTEWYGKNKRL----RNL---VNLVIVGAFFDPSKSKDREE- 583 (749)
Q Consensus 514 l~~~~~~~~~~g~l~~~~k~vIl~-vGRL~~-~Kgl~~LieA~~~l~~~----~~~---v~LvIVG~g~~~~~~~d~ee- 583 (749)
. ....+.++++ ++++++++| +||++. .||++.|++|++++... ..+ +-|+|+=.+.. +-+.+.
T Consensus 283 ~--~~~~~~~~~~--~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~---~~~~~~l 355 (590)
T cd03793 283 V--RGHFYGHYDF--DLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTN---NFNVESL 355 (590)
T ss_pred H--HHHHhhhcCC--CCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccC---CcCHHhh
Confidence 1 1123455666 667788777 799998 99999999999998651 222 33454443321 000000
Q ss_pred --HHHH-------------------------------------------------------------------HHHHHHH
Q 036539 584 --TAEI-------------------------------------------------------------------KKMHALM 594 (749)
Q Consensus 584 --~~~~-------------------------------------------------------------------~~l~~li 594 (749)
.+-. +.+...+
T Consensus 356 ~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~ 435 (590)
T cd03793 356 KGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHI 435 (590)
T ss_pred cchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHH
Confidence 0000 0111112
Q ss_pred HHcCCCC------cEEEecC---ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc----c
Q 036539 595 EKYQLKG------QMRWIAA---QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP----A 661 (749)
Q Consensus 595 ~~~~L~~------~V~flG~---~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~----~ 661 (749)
.+.+|.+ +|.|++- .+|.+-..+.+.+++ .||++|+||.+|+||++++|||+||+|||+|+.+|+ .
T Consensus 436 r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~-g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~ 514 (590)
T cd03793 436 RRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME 514 (590)
T ss_pred HHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhh-hceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH
Confidence 2222222 2455541 222333456778888 599999999999999999999999999999999998 5
Q ss_pred cccccC-ceEEEECCCCH---HHHHHHHHHHHHHhcCCHHHHHHHHHHHH-HHHHHhCCHHHHHHHHHHHHHH
Q 036539 662 EIIVDG-VSGFHIDPYNG---DESSDKIADFFEACKVDPTYWNKFSTEGL-KRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 662 EiI~dg-~~G~lv~p~d~---e~lA~aI~~~l~~l~~dp~~~~~ms~~a~-~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
|++.++ ..|+.+.+.+. .+.++.|.+++.++.+. +.++.+.++++ ++..+.|+|+..++.|.+.|..
T Consensus 515 E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 515 EHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred HHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 666555 35777763322 23333344434444443 56777766655 3444889999999999998864
No 69
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.95 E-value=6.8e-26 Score=248.93 Aligned_cols=344 Identities=13% Similarity=0.068 Sum_probs=233.2
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
|||++++.. +||.+.... +|++.|.++||+|+ ++|...... ....+.
T Consensus 2 ~~i~i~~~g-------------~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~~~~-----~~~~~~--- 48 (357)
T PRK00726 2 KKILLAGGG-------------TGGHVFPAL--------ALAEELKKRGWEVL----YLGTARGME-----ARLVPK--- 48 (357)
T ss_pred cEEEEEcCc-------------chHhhhHHH--------HHHHHHHhCCCEEE----EEECCCchh-----hhcccc---
Confidence 898887522 367777777 67778899999999 888642110 001111
Q ss_pred ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEec
Q 036539 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAH 398 (749)
Q Consensus 319 ~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H 398 (749)
.++.+.+++.....+. ...++.............+.+.+ + +.+|||||+|.+..++.+.++++..++|++++.|
T Consensus 49 -~g~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~i-k--~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 122 (357)
T PRK00726 49 -AGIEFHFIPSGGLRRK--GSLANLKAPFKLLKGVLQARKIL-K--RFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQ 122 (357)
T ss_pred -CCCcEEEEeccCcCCC--ChHHHHHHHHHHHHHHHHHHHHH-H--hcCCCEEEECCCcchhHHHHHHHHcCCCEEEEcC
Confidence 2566777765432110 00000000000011111222222 2 3489999999877777777888888999987766
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD 478 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~ 478 (749)
+... . ..+++..+.+|.+++++.+... ..+ .
T Consensus 123 ~~~~-----------~-----------~~~r~~~~~~d~ii~~~~~~~~-------------------------~~~--~ 153 (357)
T PRK00726 123 NAVP-----------G-----------LANKLLARFAKKVATAFPGAFP-------------------------EFF--K 153 (357)
T ss_pred CCCc-----------c-----------HHHHHHHHHhchheECchhhhh-------------------------ccC--C
Confidence 4210 0 1234567789999988864321 012 6
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHH-HHHHHh
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLT-EWYGKN 557 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~Li-eA~~~l 557 (749)
.++.+++||+|.+.+.+.... +++++ +++.++|+++|+....|++..++ +|+.++
T Consensus 154 ~~i~vi~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 154 PKAVVTGNPVREEILALAAPP----------------------ARLAG--REGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred CCEEEECCCCChHhhcccchh----------------------hhccC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 789999999998765442211 12333 45677889999988888876555 999888
Q ss_pred HccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCC
Q 036539 558 KRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEA 637 (749)
Q Consensus 558 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~ 637 (749)
.+. + ..++++|++.. +.+.+..+ +++. |.+.|++ +++..+|+ ++|+++++|.
T Consensus 210 ~~~-~-~~~~~~G~g~~-------------~~~~~~~~-~~~~--v~~~g~~------~~~~~~~~-~~d~~i~~~g--- 261 (357)
T PRK00726 210 PEA-L-QVIHQTGKGDL-------------EEVRAAYA-AGIN--AEVVPFI------DDMAAAYA-AADLVICRAG--- 261 (357)
T ss_pred hhC-c-EEEEEcCCCcH-------------HHHHHHhh-cCCc--EEEeehH------hhHHHHHH-hCCEEEECCC---
Confidence 653 3 56778888854 34444445 6663 9999943 47889999 5999999872
Q ss_pred CcHHHHHHHHcCCcEEEcCccc--------cccccccCceEEEECCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 036539 638 FGLTVIEAMNCGLPTFATNQGG--------PAEIIVDGVSGFHIDPYN--GDESSDKIADFFEACKVDPTYWNKFSTEGL 707 (749)
Q Consensus 638 fGLtvlEAMa~GlPVVat~~GG--------~~EiI~dg~~G~lv~p~d--~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~ 707 (749)
+.+++|||+||+|+|++..++ ..+.+.+..+|+++++.| +++++++|.+ +++|++.+++|+++++
T Consensus 262 -~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~----ll~~~~~~~~~~~~~~ 336 (357)
T PRK00726 262 -ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLE----LLSDPERLEAMAEAAR 336 (357)
T ss_pred -HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHH----HHcCHHHHHHHHHHHH
Confidence 689999999999999987653 235677778999999888 8999999954 5589999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHH
Q 036539 708 KRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 708 ~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+++ +.++-+.+++.++++.+
T Consensus 337 ~~~-~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 337 ALG-KPDAAERLADLIEELAR 356 (357)
T ss_pred hcC-CcCHHHHHHHHHHHHhh
Confidence 987 88999999999988764
No 70
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.94 E-value=4.9e-26 Score=258.71 Aligned_cols=321 Identities=15% Similarity=0.106 Sum_probs=216.3
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..+..+.... ...|+|+.|.+...+++.++.++. ..|+++..|.. +|.++. |..+.. + ..-...+-
T Consensus 120 ~fa~~i~~~~-~~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~Hip----fP~~e~-~~~lp~------~-~~ll~~~l 186 (460)
T cd03788 120 KFADAIAEVL-RPGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIP----FPSSEI-FRCLPW------R-EELLRGLL 186 (460)
T ss_pred HHHHHHHHhc-CCCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCC----CCChHH-HhhCCC------h-HHHHHHHh
Confidence 3333444433 356999999998877777776643 58899999965 333332 221110 0 11123566
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCC--CCceEEecCCCCCCCCCCCchHHhhhhccchhhH
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVL--DPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIE 511 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~--~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~ 511 (749)
.+|.|...+...+..........- +.+ .....++... ..++.++|||||++.|.+..........
T Consensus 187 ~~D~igF~t~~~~~~Fl~~~~~~l---~~~----~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~------ 253 (460)
T cd03788 187 GADLIGFQTERYARNFLSCCSRLL---GLE----VTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQER------ 253 (460)
T ss_pred cCCEEEECCHHHHHHHHHHHHHHc---CCc----ccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHH------
Confidence 799999988765542211100000 000 0000011111 3478999999999988654321110000
Q ss_pred HhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC----eEEEEEeccCCCCCCcchhHHHHH
Q 036539 512 ELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNL----VNLVIVGAFFDPSKSKDREETAEI 587 (749)
Q Consensus 512 ~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~~ 587 (749)
.++..+. .+++++|+++||+++.||++.+++|+.++.+.+|+ ++|+++|++.. ...++.....
T Consensus 254 --------~~~~~~~--~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~---g~~~~~~~l~ 320 (460)
T cd03788 254 --------AAELRER--LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSR---TDVPEYQELR 320 (460)
T ss_pred --------HHHHHHh--cCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCC---cCcHHHHHHH
Confidence 0011222 45788999999999999999999999998877665 67999987642 1112333445
Q ss_pred HHHHHHHHHcCCC------CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCc----EEEcCc
Q 036539 588 KKMHALMEKYQLK------GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP----TFATNQ 657 (749)
Q Consensus 588 ~~l~~li~~~~L~------~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlP----VVat~~ 657 (749)
+++.+++.+.+.. ..|.+++ +.++.+++..+|+ ++|+||+||..|+||++++|||+||+| ||+|+.
T Consensus 321 ~~l~~~v~~in~~~g~~~~~~v~~~~---g~v~~~el~~~y~-~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~ 396 (460)
T cd03788 321 REVEELVGRINGKFGTLDWTPVRYLY---RSLPREELAALYR-AADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEF 396 (460)
T ss_pred HHHHHHHHHHHhccCCCCceeEEEEe---CCCCHHHHHHHHH-hccEEEeCccccccCcccceeEEEecCCCceEEEecc
Confidence 5666666554321 2355553 1678999999999 599999999999999999999999999 999999
Q ss_pred cccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 658 GGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 658 GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
+|..+. +.+|++++|.|++++|++|.+++ ..+++.++++++++++++ ++|||+..+++++.
T Consensus 397 ~G~~~~---~~~g~lv~p~d~~~la~ai~~~l---~~~~~e~~~~~~~~~~~v-~~~~~~~w~~~~l~ 457 (460)
T cd03788 397 AGAAEE---LSGALLVNPYDIDEVADAIHRAL---TMPLEERRERHRKLREYV-RTHDVQAWANSFLD 457 (460)
T ss_pred ccchhh---cCCCEEECCCCHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHH
Confidence 998877 46799999999999999997654 235688899999999998 78999999999876
No 71
>PHA01633 putative glycosyl transferase group 1
Probab=99.94 E-value=2.6e-25 Score=240.73 Aligned_cols=224 Identities=12% Similarity=0.087 Sum_probs=167.5
Q ss_pred HhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhh
Q 036539 431 AMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEI 510 (749)
Q Consensus 431 a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~ 510 (749)
.|.+.+.+|++|...++.. ...|++ .+ + +|+||+|.+.|.|........
T Consensus 89 ~m~~~~~vIavS~~t~~~L--------------------~~~G~~--~~-i-~I~~GVD~~~f~p~~~~~~~~------- 137 (335)
T PHA01633 89 YLLQDVKFIPNSKFSAENL--------------------QEVGLQ--VD-L-PVFHGINFKIVENAEKLVPQL------- 137 (335)
T ss_pred HHhcCCEEEeCCHHHHHHH--------------------HHhCCC--Cc-e-eeeCCCChhhcCccchhhHHH-------
Confidence 4666778999998776621 123444 22 3 478999999987754221111
Q ss_pred HHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC----eEEEEEeccCCCCCCcchhHHHH
Q 036539 511 EELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNL----VNLVIVGAFFDPSKSKDREETAE 586 (749)
Q Consensus 511 ~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~ 586 (749)
++.++.. .++.++|+++||+++.||++.|++|+.++.+..++ ++++++|++
T Consensus 138 ----------r~~~~~~-~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-------------- 192 (335)
T PHA01633 138 ----------KQKLDKD-FPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-------------- 192 (335)
T ss_pred ----------HHHhCcC-CCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--------------
Confidence 1223321 14667899999999999999999999999876654 578877632
Q ss_pred HHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 036539 587 IKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD 666 (749)
Q Consensus 587 ~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d 666 (749)
..+++++.++|+|+|... .++.+++.++|+ ++|+||+||.+|+||++++|||+||+|||+|+.||..|++.+
T Consensus 193 ------~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~-~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~ 264 (335)
T PHA01633 193 ------QFTQLEVPANVHFVAEFG-HNSREYIFAFYG-AMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSW 264 (335)
T ss_pred ------HHHHcCCCCcEEEEecCC-CCCHHHHHHHHH-hCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCC
Confidence 124567888999996322 556789999999 499999999999999999999999999999999999997542
Q ss_pred ------------------CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 036539 667 ------------------GVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKML 724 (749)
Q Consensus 667 ------------------g~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll 724 (749)
...||.+++.|++++|++|..+++ ..+++.+ +.++++++ ++|+|+.++++++
T Consensus 265 ~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~--~~~~~~~---~~~~~~~a-~~f~~~~~~~~~~ 334 (335)
T PHA01633 265 QWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFE--LQDREER---SMKLKELA-KKYDIRNLYTRFL 334 (335)
T ss_pred ccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHh--ccChhhh---hHHHHHHH-HhcCHHHHHHHhh
Confidence 235889999999999999987652 2344433 67777776 8999999999886
No 72
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.94 E-value=1.6e-24 Score=236.70 Aligned_cols=324 Identities=14% Similarity=0.105 Sum_probs=221.3
Q ss_pred CcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCcccccc
Q 036539 260 DTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRW 339 (749)
Q Consensus 260 ~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~ 339 (749)
.+||...++. .|++.|.++||+|+ |+|...... .+.. ...++.+.++|+....+
T Consensus 8 ~~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~----- 61 (350)
T cd03785 8 GTGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGLE--------ARLV-PKAGIPLHTIPVGGLRR----- 61 (350)
T ss_pred CchhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcch--------hhcc-cccCCceEEEEecCcCC-----
Confidence 3578888777 77778899999999 888753211 0111 11246777777643211
Q ss_pred ccccccccchH------HHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhh
Q 036539 340 VSRFDVYPYLE------GFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWK 413 (749)
Q Consensus 340 isr~~i~pyl~------~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~ 413 (749)
...+..+. .....+.+.+. +.+||+||+|.+..++.+.++++..++|+++..|+...
T Consensus 62 ---~~~~~~~~~~~~~~~~~~~~~~~i~---~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~----------- 124 (350)
T cd03785 62 ---KGSLKKLKAPFKLLKGVLQARKILK---KFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVP----------- 124 (350)
T ss_pred ---CChHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCc-----------
Confidence 11111111 11112222222 34899999998777777778888899999875553210
Q ss_pred hcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCC
Q 036539 414 ELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVY 493 (749)
Q Consensus 414 ~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f 493 (749)
. ..+++....+|.|+++|+...+. ++ ..++.+|+||+|.+.+
T Consensus 125 ~-----------~~~~~~~~~~~~vi~~s~~~~~~-------------------------~~--~~~~~~i~n~v~~~~~ 166 (350)
T cd03785 125 G-----------LANRLLARFADRVALSFPETAKY-------------------------FP--KDKAVVTGNPVREEIL 166 (350)
T ss_pred c-----------HHHHHHHHhhCEEEEcchhhhhc-------------------------CC--CCcEEEECCCCchHHh
Confidence 0 11344567799999999776540 12 5689999999998766
Q ss_pred CCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHH-HHHHHHHhHccCCCeEE-EEEec
Q 036539 494 FPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTG-LTEWYGKNKRLRNLVNL-VIVGA 571 (749)
Q Consensus 494 ~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~-LieA~~~l~~~~~~v~L-vIVG~ 571 (749)
.+... ++.+++ ++++++|+++|+....|+... +++++..+.+ +++++ +++|.
T Consensus 167 ~~~~~----------------------~~~~~~--~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~ 220 (350)
T cd03785 167 ALDRE----------------------RARLGL--RPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRLQVIHQTGK 220 (350)
T ss_pred hhhhh----------------------HHhcCC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCC
Confidence 54221 123455 567788888887777777654 5588888863 35664 46777
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCc
Q 036539 572 FFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP 651 (749)
Q Consensus 572 g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlP 651 (749)
+ . .+++.+.++++ .++|.|.|++ +++..+|+. +|++|.+|- |++++|||++|+|
T Consensus 221 g-~------------~~~l~~~~~~~--~~~v~~~g~~------~~~~~~l~~-ad~~v~~sg----~~t~~Eam~~G~P 274 (350)
T cd03785 221 G-D------------LEEVKKAYEEL--GVNYEVFPFI------DDMAAAYAA-ADLVISRAG----ASTVAELAALGLP 274 (350)
T ss_pred c-c------------HHHHHHHHhcc--CCCeEEeehh------hhHHHHHHh-cCEEEECCC----HhHHHHHHHhCCC
Confidence 6 4 45666777665 4789999943 578899994 999998762 6899999999999
Q ss_pred EEEcCccc--------cccccccCceEEEECCC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 036539 652 TFATNQGG--------PAEIIVDGVSGFHIDPY--NGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYAN 721 (749)
Q Consensus 652 VVat~~GG--------~~EiI~dg~~G~lv~p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~ 721 (749)
||+++.++ ..+.+.++.+|+++++. |+++++++|.++ ++|++.+++|++++++++ +.+.-+++++
T Consensus 275 vv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~l----l~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 349 (350)
T cd03785 275 AILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLEL----LSDPERLKAMAEAARSLA-RPDAAERIAD 349 (350)
T ss_pred EEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHH----hcCHHHHHHHHHHHHhcC-CCCHHHHHHh
Confidence 99987654 24667777899999987 899999999654 479999999999999887 5676666553
No 73
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.93 E-value=3.5e-24 Score=233.77 Aligned_cols=326 Identities=15% Similarity=0.110 Sum_probs=211.3
Q ss_pred CcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCcccccccc
Q 036539 262 GGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVS 341 (749)
Q Consensus 262 GG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~is 341 (749)
||..-++. .+. .|+++|.++||+|+ ++|+..... . .. ....++.+.+++.....+ .+
T Consensus 8 g~~~g~~~-~~~----~La~~L~~~g~eV~----vv~~~~~~~-----~-~~---~~~~g~~~~~i~~~~~~~-----~~ 64 (348)
T TIGR01133 8 GGTGGHIF-PAL----AVAEELIKRGVEVL----WLGTKRGLE-----K-RL---VPKAGIEFYFIPVGGLRR-----KG 64 (348)
T ss_pred CccHHHHh-HHH----HHHHHHHhCCCEEE----EEeCCCcch-----h-cc---cccCCCceEEEeccCcCC-----CC
Confidence 55555554 112 67888999999999 888632110 0 00 011246677777543211 00
Q ss_pred ccccccch---HHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcc
Q 036539 342 RFDVYPYL---EGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPK 418 (749)
Q Consensus 342 r~~i~pyl---~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~ 418 (749)
....++.. ......+.+.+. +.+||+||+|.+..+..+.++++..++|++...|+.. .
T Consensus 65 ~~~~l~~~~~~~~~~~~l~~~i~---~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~---------------~- 125 (348)
T TIGR01133 65 SFRLIKTPLKLLKAVFQARRILK---KFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAV---------------P- 125 (348)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCC---------------c-
Confidence 11111111 111122222222 3489999999877777777788888999874333210 0
Q ss_pred cccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCch
Q 036539 419 YHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTE 498 (749)
Q Consensus 419 y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~ 498 (749)
. ..+++..+.+|.+++.|+...+ | -+..+|+||+|...+.+...
T Consensus 126 -~-----~~~~~~~~~~d~ii~~~~~~~~--------~----------------------~~~~~i~n~v~~~~~~~~~~ 169 (348)
T TIGR01133 126 -G-----LTNKLLSRFAKKVLISFPGAKD--------H----------------------FEAVLVGNPVRQEIRSLPVP 169 (348)
T ss_pred -c-----HHHHHHHHHhCeeEECchhHhh--------c----------------------CCceEEcCCcCHHHhcccch
Confidence 0 1134566789999999976544 0 02368999998765543211
Q ss_pred HHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHH-HHHHHHHhHccCCCeEEEEEeccCCCCC
Q 036539 499 KQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTG-LTEWYGKNKRLRNLVNLVIVGAFFDPSK 577 (749)
Q Consensus 499 ~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~-LieA~~~l~~~~~~v~LvIVG~g~~~~~ 577 (749)
++.+++ ++++++|+++|+....|++.. +++|+.++.+. ++++++++++..
T Consensus 170 ----------------------~~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~--- 220 (348)
T TIGR01133 170 ----------------------RERFGL--REGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKND--- 220 (348)
T ss_pred ----------------------hhhcCC--CCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcch---
Confidence 012454 567788999998888888655 55888888653 466655554433
Q ss_pred CcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc
Q 036539 578 SKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ 657 (749)
Q Consensus 578 ~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~ 657 (749)
.+.+++.++++++...+.|.. . ++..+|+ ++|++|.+| + |++++|||++|+|+|+++.
T Consensus 221 ---------~~~l~~~~~~~~l~~~v~~~~-------~-~~~~~l~-~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~ 278 (348)
T TIGR01133 221 ---------LEKVKNVYQELGIEAIVTFID-------E-NMAAAYA-AADLVISRA---G-ASTVAELAAAGVPAILIPY 278 (348)
T ss_pred ---------HHHHHHHHhhCCceEEecCcc-------c-CHHHHHH-hCCEEEECC---C-hhHHHHHHHcCCCEEEeeC
Confidence 356777778877755555542 1 6788888 599999875 2 7899999999999999977
Q ss_pred cc-------cccccccCceEEEECCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 036539 658 GG-------PAEIIVDGVSGFHIDPYN--GDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYAN 721 (749)
Q Consensus 658 GG-------~~EiI~dg~~G~lv~p~d--~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~ 721 (749)
+| ..+++.++.+|++++++| +++++++|.+ +++||+.+++|++++++++ +...-+.+++
T Consensus 279 ~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~----ll~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 346 (348)
T TIGR01133 279 PYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLK----LLLDPANLEAMAEAARKLA-KPDAAKRIAE 346 (348)
T ss_pred CCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHH----HHcCHHHHHHHHHHHHhcC-CccHHHHHHh
Confidence 54 235788889999999887 9999999955 4589999999999998876 4555554443
No 74
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.93 E-value=2.5e-24 Score=243.58 Aligned_cols=321 Identities=14% Similarity=0.132 Sum_probs=215.7
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..+..+.+.. ..-|+|.+|.....+++.++.++. ..++.+..|.. +|.+++... +. ....-...|-
T Consensus 116 ~fA~~i~~~~-~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHip----fP~~e~f~~-lp-------~r~~il~gll 182 (456)
T TIGR02400 116 LFAEALAPLL-QPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIP----FPSSEIYRT-LP-------WRRELLEGLL 182 (456)
T ss_pred HHHHHHHHhC-CCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCC----CCChHHHhh-CC-------cHHHHHHHHh
Confidence 4444455543 245899999999888888887764 45788889954 443432211 11 0011234788
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCC--CCCceEEecCCCCCCCCCCCchHHhhhhccchhhH
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDV--LDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIE 511 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~--~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~ 511 (749)
.||.|...|+..+..+.......- ++-....++.. -..++.++|||||++.|.+.......... .
T Consensus 183 ~~dligF~t~~~~~~Fl~~~~~~l--------~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~----~- 249 (456)
T TIGR02400 183 AYDLVGFQTYDDARNFLSAVSREL--------GLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKR----I- 249 (456)
T ss_pred cCCEEEECCHHHHHHHHHHHHHHh--------CCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHH----H-
Confidence 999999999988764333211100 00000011111 13478899999999998764322110000 0
Q ss_pred HhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC----eEEEEEeccCCCCCCcchhHHHHH
Q 036539 512 ELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNL----VNLVIVGAFFDPSKSKDREETAEI 587 (749)
Q Consensus 512 ~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~~ 587 (749)
...++.+ +++++|+++||+++.||++.+++|++++.+.+|+ +.|+++|+... ...++.....
T Consensus 250 ------~~lr~~~-----~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~r---g~~~~~~~l~ 315 (456)
T TIGR02400 250 ------AELRESL-----KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSR---GDVPEYQQLR 315 (456)
T ss_pred ------HHHHHHc-----CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCc---cCchHHHHHH
Confidence 0011111 3678999999999999999999999998776665 56888875322 1112222223
Q ss_pred HHHHHHHHHcC-CCCc-----EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCc----EEEcCc
Q 036539 588 KKMHALMEKYQ-LKGQ-----MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP----TFATNQ 657 (749)
Q Consensus 588 ~~l~~li~~~~-L~~~-----V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlP----VVat~~ 657 (749)
+.+++++.+.+ ..+. +.+++ ..++.+++..+|+ ++|++|+||..||||++++||||||+| +|+|+.
T Consensus 316 ~~i~~lv~~in~~~~~~~~~pv~~l~---~~~~~~el~aly~-aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~ 391 (456)
T TIGR02400 316 RQVEELVGRINGRFGTLDWTPIRYLN---RSYDREELMALYR-AADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEF 391 (456)
T ss_pred HHHHHHHHHHHhccCCCCCccEEEEc---CCCCHHHHHHHHH-hCcEEEECccccccCccHHHHHHhcCCCCceEEEeCC
Confidence 33444433221 1111 44544 2677899999999 599999999999999999999999999 999999
Q ss_pred cccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 036539 658 GGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNM 726 (749)
Q Consensus 658 GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 726 (749)
+|..+.+. +|++++|.|++++|++|.+++ ..+++.+++..+++++++ .+||+...++++++-
T Consensus 392 ~G~~~~l~---~gllVnP~d~~~lA~aI~~aL---~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 453 (456)
T TIGR02400 392 AGAAQELN---GALLVNPYDIDGMADAIARAL---TMPLEEREERHRAMMDKL-RKNDVQRWREDFLSD 453 (456)
T ss_pred CCChHHhC---CcEEECCCCHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 99888884 799999999999999997655 247889999999999998 679999999998863
No 75
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.92 E-value=2.2e-23 Score=234.88 Aligned_cols=285 Identities=13% Similarity=0.105 Sum_probs=193.0
Q ss_pred CceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHH
Q 036539 367 KPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEI 446 (749)
Q Consensus 367 ~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~ 446 (749)
+||+||++..+........+++.|+|++.+-|.+.. .+...|+. .. ...+..++.+|.|++.|....
T Consensus 124 ~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~----~s~~~~~~-------~~--~~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 124 RPKLVIIMETELWPNLIAELKRRGIPLVLANARLSE----RSFKRYQK-------FK--RFYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred CCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCCh----hhHHHHHH-------HH--HHHHHHHHhCCEEEECCHHHH
Confidence 899999885553222233457789999877654311 01111111 11 123456788999999998877
Q ss_pred hhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCc
Q 036539 447 AGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGY 526 (749)
Q Consensus 447 ~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~ 526 (749)
+.. ...|++ .. +.+++|+ +.+.+.+....... . ..++.++
T Consensus 191 ~~l--------------------~~~g~~--~~-i~vi~n~-~~d~~~~~~~~~~~-~--------------~~r~~~~- 230 (425)
T PRK05749 191 ERF--------------------LALGAK--NE-VTVTGNL-KFDIEVPPELAARA-A--------------TLRRQLA- 230 (425)
T ss_pred HHH--------------------HHcCCC--CC-cEecccc-cccCCCChhhHHHH-H--------------HHHHHhc-
Confidence 621 122444 44 7788884 33333221111110 0 0112233
Q ss_pred cCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEe
Q 036539 527 LADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWI 606 (749)
Q Consensus 527 l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 606 (749)
+++++++++|+. .|+.+.|++|+.++.+..|+++|+|+|+|+. ..+++.+++++.|+. .+.|.
T Consensus 231 ---~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~-----------r~~~l~~~~~~~gl~-~~~~~ 293 (425)
T PRK05749 231 ---PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPE-----------RFKEVEELLKKAGLS-YVRRS 293 (425)
T ss_pred ---CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChh-----------hHHHHHHHHHhCCCc-EEEcc
Confidence 356788888864 6889999999999887788999999999875 125788888988885 35554
Q ss_pred cCccCc--------CChHHHHHHHHccCcEEE-ECCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccC-ceEEEECC
Q 036539 607 AAQSDR--------LRNGELYRCIADTKGAFV-QPALYEAFGLTVIEAMNCGLPTFATNQ-GGPAEIIVDG-VSGFHIDP 675 (749)
Q Consensus 607 G~~~~~--------~~~~el~~~la~aadvfV-~PS~~E~fGLtvlEAMa~GlPVVat~~-GG~~EiI~dg-~~G~lv~p 675 (749)
|..... -..+++..+|+ .+|+++ .+|..|++|++++|||+||+|||++.. ++..|+++.. .+|+++++
T Consensus 294 ~~~~~~~~~~v~l~~~~~el~~~y~-~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~ 372 (425)
T PRK05749 294 QGEPPSADTDVLLGDTMGELGLLYA-IADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQV 372 (425)
T ss_pred CCCCCCCCCcEEEEecHHHHHHHHH-hCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEE
Confidence 421100 02469999999 599955 478889999999999999999999864 5666766543 46888889
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 676 YNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 676 ~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+|+++++++|.+ +++||+.+++|+++|++.+.++ ...++++++++..
T Consensus 373 ~d~~~La~~l~~----ll~~~~~~~~m~~~a~~~~~~~---~~~~~~~~~~l~~ 419 (425)
T PRK05749 373 EDAEDLAKAVTY----LLTDPDARQAYGEAGVAFLKQN---QGALQRTLQLLEP 419 (425)
T ss_pred CCHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHhC---ccHHHHHHHHHHH
Confidence 999999999965 4589999999999999999665 3666777776654
No 76
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.91 E-value=4.5e-23 Score=228.73 Aligned_cols=262 Identities=13% Similarity=0.057 Sum_probs=179.7
Q ss_pred CCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHH
Q 036539 366 GKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQE 445 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~ 445 (749)
.+||+||++++..++.....++..++|+++++++.... ..+..+.+|.++++|...
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~------------------------~~~~~~~ad~i~~~s~~~ 158 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLH------------------------KIWVHREVDRYFVATDHV 158 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCC------------------------cccccCCCCEEEECCHHH
Confidence 48999999877665444444445679988666543110 012456899999999876
Q ss_pred HhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcC
Q 036539 446 IAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIG 525 (749)
Q Consensus 446 ~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g 525 (749)
.+. ....|++ ..|+.++++.++.....+..... .++++|
T Consensus 159 ~~~--------------------l~~~gi~--~~ki~v~G~p~~~~f~~~~~~~~-------------------~~~~~~ 197 (380)
T PRK13609 159 KKV--------------------LVDIGVP--PEQVVETGIPIRSSFELKINPDI-------------------IYNKYQ 197 (380)
T ss_pred HHH--------------------HHHcCCC--hhHEEEECcccChHHcCcCCHHH-------------------HHHHcC
Confidence 551 1123555 67888876655432221111111 124466
Q ss_pred ccCCCCCcE-EEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE
Q 036539 526 YLADRKKPI-IFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR 604 (749)
Q Consensus 526 ~l~~~~k~v-Il~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 604 (749)
+ ++++++ +++.|++...||+..+++++.+. ++++++++|++.. ...+++++++++++ ++|+
T Consensus 198 l--~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~----------~~~~~l~~~~~~~~--~~v~ 259 (380)
T PRK13609 198 L--CPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE----------ALKQSLEDLQETNP--DALK 259 (380)
T ss_pred C--CCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH----------HHHHHHHHHHhcCC--CcEE
Confidence 6 555554 55568888899999999988642 5789988876432 12456666666654 6899
Q ss_pred EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC-cccc----ccccccCceEEEECCCCHH
Q 036539 605 WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN-QGGP----AEIIVDGVSGFHIDPYNGD 679 (749)
Q Consensus 605 flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~-~GG~----~EiI~dg~~G~lv~p~d~e 679 (749)
|+|++. ++..+|+ ++|++|. ++.|++++|||+||+|+|+++ .+|. .+.+.+ +|+.+.+.|++
T Consensus 260 ~~g~~~------~~~~l~~-~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~ 326 (380)
T PRK13609 260 VFGYVE------NIDELFR-VTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDE 326 (380)
T ss_pred EEechh------hHHHHHH-hccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHH
Confidence 999543 5788888 5999885 566999999999999999985 5553 123433 45555567999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 680 ESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 680 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+++++|.+ +++||+.+++|++++++.. +.++++.+++.+++++.
T Consensus 327 ~l~~~i~~----ll~~~~~~~~m~~~~~~~~-~~~s~~~i~~~i~~~~~ 370 (380)
T PRK13609 327 EVFAKTEA----LLQDDMKLLQMKEAMKSLY-LPEPADHIVDDILAENH 370 (380)
T ss_pred HHHHHHHH----HHCCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHhhh
Confidence 99999955 4589999999999998765 67899999999998764
No 77
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.91 E-value=1.3e-23 Score=206.21 Aligned_cols=160 Identities=36% Similarity=0.538 Sum_probs=143.7
Q ss_pred CCCCcEEEEEecccCCCCHHHHHHHHHHhHcc-CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEec
Q 036539 529 DRKKPIIFSMARLDVVKNLTGLTEWYGKNKRL-RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIA 607 (749)
Q Consensus 529 ~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~-~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG 607 (749)
+.++++|+++||+++.||++.+++++..+... .+++.|+|+|.+.. ...+...++.+++..++.|+|
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~i~~~~ 79 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY------------KKELKNLIEKLNLKENIIFLG 79 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH------------HHHHHHHHHHTTCGTTEEEEE
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc------------ccccccccccccccccccccc
Confidence 67889999999999999999999999999763 68899999996655 677888999999999999999
Q ss_pred CccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHH
Q 036539 608 AQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIAD 687 (749)
Q Consensus 608 ~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ 687 (749)
..+.+++..++.. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++++.|+++++++|.+
T Consensus 80 ----~~~~~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~ 154 (172)
T PF00534_consen 80 ----YVPDDELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEK 154 (172)
T ss_dssp ----SHSHHHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHH
T ss_pred ----ccccccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHH
Confidence 6668899999995 99999999999999999999999999999999999999999999999999999999999965
Q ss_pred HHHHhcCCHHHHHHHHHHHHHH
Q 036539 688 FFEACKVDPTYWNKFSTEGLKR 709 (749)
Q Consensus 688 ~l~~l~~dp~~~~~ms~~a~~~ 709 (749)
++ .+++.++.|+++|++|
T Consensus 155 ~l----~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 155 LL----NDPELRQKLGKNARER 172 (172)
T ss_dssp HH----HHHHHHHHHHHHHHHH
T ss_pred HH----CCHHHHHHHHHHhcCC
Confidence 54 7899999999999875
No 78
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.90 E-value=3e-22 Score=239.78 Aligned_cols=321 Identities=12% Similarity=0.104 Sum_probs=215.5
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHc-CCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASK-LGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~-~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..+..+.+..+ .-|+|-.|.....+++.++.++ ..+++.+..|.. +|.++++...- ....-...|-
T Consensus 136 ~FA~~i~~~~~-~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiP----FPs~e~fr~lp--------~r~~il~gll 202 (797)
T PLN03063 136 MFLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTP----FPSSEIYKTLP--------SRSELLRAVL 202 (797)
T ss_pred HHHHHHHHhcC-CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCC----CCCHHHHhhCC--------CHHHHHHHHh
Confidence 34444555442 3489999999988888888775 457888999965 44443221110 0111234778
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCC--CCceEEecCCCCCCCCCCCchHH---hhhhccch
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVL--DPKFNIAAPGADQSVYFPYTEKQ---RRLTKFHP 508 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~--~~ki~VIpnGvD~~~f~p~~~~~---~rl~~~~~ 508 (749)
.||.|-..|...+..+.......-. +-....++... ..++.++|||||++.|.+..... .+...
T Consensus 203 ~aDligF~t~~y~r~Fl~~~~r~l~--------~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~--- 271 (797)
T PLN03063 203 TADLIGFHTYDFARHFLSACTRILG--------VEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKE--- 271 (797)
T ss_pred cCCEEEeCCHHHHHHHHHHHHHHhC--------ccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHH---
Confidence 8999999998776533221100000 00000111111 24788999999998886532211 11000
Q ss_pred hhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCe----EEEEEeccCCCCCCcchhHH
Q 036539 509 EIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLV----NLVIVGAFFDPSKSKDREET 584 (749)
Q Consensus 509 ~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v----~LvIVG~g~~~~~~~d~ee~ 584 (749)
.++. ..++++|+++||+++.||+..+++||.++.+.+|++ .|+.+++... .+.
T Consensus 272 -----------lr~~-----~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr-------~~~ 328 (797)
T PLN03063 272 -----------LKRF-----FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTR-------NDV 328 (797)
T ss_pred -----------HHHh-----cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCC-------Cch
Confidence 0011 235789999999999999999999999998777765 3554543221 111
Q ss_pred HHHHHHHHHHHHcC--CC---CcEEEec--CccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCc----EE
Q 036539 585 AEIKKMHALMEKYQ--LK---GQMRWIA--AQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP----TF 653 (749)
Q Consensus 585 ~~~~~l~~li~~~~--L~---~~V~flG--~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlP----VV 653 (749)
.+.+++++.++++. ++ +.+.|.+ +....++.+++..+|+ +||+||+||..||||++++|||+||+| +|
T Consensus 329 ~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~-~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlV 407 (797)
T PLN03063 329 PEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYA-ITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLV 407 (797)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHH-hCCEEEeCccccccCcchhhHheeecCCCCCEE
Confidence 12334444454442 22 2233333 1113678899999999 599999999999999999999999999 99
Q ss_pred EcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 654 ATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 654 at~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+|..+|.++.+ +.+|++++|.|++++|++|.+++. -+++.+++..++.++++ .++||...++.+++-+..
T Consensus 408 lSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~Wa~~fl~~l~~ 477 (797)
T PLN03063 408 LSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEALN---MSDEERETRHRHNFQYV-KTHSAQKWADDFMSELND 477 (797)
T ss_pred eeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHhh-hhCCHHHHHHHHHHHHHH
Confidence 99999999986 557999999999999999976652 38888888889999998 889999999999886643
No 79
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.89 E-value=7.8e-21 Score=210.68 Aligned_cols=267 Identities=15% Similarity=0.079 Sum_probs=177.2
Q ss_pred cCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCH
Q 036539 364 LGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTF 443 (749)
Q Consensus 364 l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~ 443 (749)
++.+.+|+..+.+....++.. ..+.++|+.+++..... +... .. ....+...++.||.|+++|.
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~~---~~~~~~Vyd~~D~~~~~-~~~~-------~~-----~~~~e~~~~~~ad~vi~~S~ 162 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAAL---LQASLVVYDCVDDLSAF-PGGP-------PE-----LLEAERRLLKRADLVFTTSP 162 (373)
T ss_pred cCCCCcEEEEeCccHHHHHhh---cCCCeEEEEcccchhcc-CCCC-------HH-----HHHHHHHHHHhCCEEEECCH
Confidence 355666777765555433333 56788888888753211 1100 00 01346778999999999998
Q ss_pred HHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhh
Q 036539 444 QEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEH 523 (749)
Q Consensus 444 ~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 523 (749)
...+... . ...++.+||||+|.+.|.+........ +.
T Consensus 163 ~l~~~~~----------------------~---~~~~i~~i~ngvd~~~f~~~~~~~~~~------------------~~ 199 (373)
T cd04950 163 SLYEAKR----------------------R---LNPNVVLVPNGVDYEHFAAARDPPPPP------------------AD 199 (373)
T ss_pred HHHHHHh----------------------h---CCCCEEEcccccCHHHhhcccccCCCh------------------hH
Confidence 7665111 0 136899999999999886643221100 00
Q ss_pred cCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcE
Q 036539 524 IGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM 603 (749)
Q Consensus 524 ~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 603 (749)
....++++|+|+|++++.++++.+.+++. ..|+++|+|+|++... ..... ....++|
T Consensus 200 ---~~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~~~~vliG~~~~~------------~~~~~----~~~~~nV 256 (373)
T cd04950 200 ---LAALPRPVIGYYGAIAEWLDLELLEALAK----ARPDWSFVLIGPVDVS------------IDPSA----LLRLPNV 256 (373)
T ss_pred ---HhcCCCCEEEEEeccccccCHHHHHHHHH----HCCCCEEEEECCCcCc------------cChhH----hccCCCE
Confidence 01346789999999999888776655443 3478999999998320 01111 1114789
Q ss_pred EEecCccCcCChHHHHHHHHccCcEEEECCCC-----CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH
Q 036539 604 RWIAAQSDRLRNGELYRCIADTKGAFVQPALY-----EAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNG 678 (749)
Q Consensus 604 ~flG~~~~~~~~~el~~~la~aadvfV~PS~~-----E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~ 678 (749)
.|+| .++.+++..+++. +|++++|+.. +++|++++||||||+|||+|+.++. +..+..+++ .++|+
T Consensus 257 ~~~G----~~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~-~~~d~ 327 (373)
T cd04950 257 HYLG----PKPYKELPAYLAG-FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEV---RRYEDEVVL-IADDP 327 (373)
T ss_pred EEeC----CCCHHHHHHHHHh-CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHH---HhhcCcEEE-eCCCH
Confidence 9999 7788999999995 9999999863 4689999999999999999987654 444433444 45699
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
++++++|.+++. ..++...+ ++++ +.+.|||+..++++++...
T Consensus 328 ~~~~~ai~~~l~--~~~~~~~~----~~~~-~~~~~sW~~~a~~~~~~l~ 370 (373)
T cd04950 328 EEFVAAIEKALL--EDGPARER----RRLR-LAAQNSWDARAAEMLEALQ 370 (373)
T ss_pred HHHHHHHHHHHh--cCCchHHH----HHHH-HHHHCCHHHHHHHHHHHHH
Confidence 999999977542 12222222 2222 4588999999999996543
No 80
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.87 E-value=2.7e-21 Score=231.44 Aligned_cols=323 Identities=14% Similarity=0.087 Sum_probs=212.1
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..+..+....+ .-|+|..|.....+++.++.++. ..++.+..|.. +|.+++.... + ....-...|-
T Consensus 122 ~fA~~~~~~~~-~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~p----fP~~~~f~~l--p------~~~~ll~~ll 188 (726)
T PRK14501 122 RFAEAIAAIAR-PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIP----FPSFEVFRLL--P------WREEILEGLL 188 (726)
T ss_pred HHHHHHHHhcC-CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCC----CCChHHHhhC--C------ChHHHHHHHh
Confidence 34444454433 34899999999988888887653 56788899965 4433333221 1 0011234788
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCC--CCceEEecCCCCCCCCCCCchHHhhhhccchhhH
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVL--DPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIE 511 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~--~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~ 511 (749)
.+|.|-..|...+..+.......-. ++. ...++.+. ..++.++|||||++.|.+.......... .+
T Consensus 189 ~~Dligf~t~~~~r~Fl~~~~~~l~-----~~~---~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~----~~ 256 (726)
T PRK14501 189 GADLIGFHTYDYVRHFLSSVLRVLG-----YET---ELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEE----IR 256 (726)
T ss_pred cCCeEEeCCHHHHHHHHHHHHHHcC-----Ccc---CCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHH----HH
Confidence 8999998888755532211110000 000 00011111 2368899999999988764321110000 00
Q ss_pred HhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC----eEEEEEeccCCCCCCcchhHHHHH
Q 036539 512 ELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNL----VNLVIVGAFFDPSKSKDREETAEI 587 (749)
Q Consensus 512 ~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~~ 587 (749)
+ .++. .+++++|+++||+++.||+..+++|++++.+.+|+ ++|+++|.+.. ..-++..+..
T Consensus 257 ~-------lr~~-----~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr---~~~~~~~~l~ 321 (726)
T PRK14501 257 R-------LRQD-----LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR---TGVPQYQEMK 321 (726)
T ss_pred H-------HHHH-----cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC---cchHHHHHHH
Confidence 0 0011 24677999999999999999999999998776675 78999985432 0012222334
Q ss_pred HHHHHHHHHcC----C---CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHc-----CCcEEEc
Q 036539 588 KKMHALMEKYQ----L---KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNC-----GLPTFAT 655 (749)
Q Consensus 588 ~~l~~li~~~~----L---~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~-----GlPVVat 655 (749)
+.+.+++.+.+ . .+-+.+.| .++.+++..+|+ ++|+||+||..||||++++|||+| |.||+++
T Consensus 322 ~~~~~~v~~in~~~~~~~~~pv~~~~~----~~~~~~l~~ly~-~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~ 396 (726)
T PRK14501 322 REIDELVGRINGEFGTVDWTPIHYFYR----SLPFEELVALYR-AADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSE 396 (726)
T ss_pred HHHHHHHHHHHhhcCCCCcceEEEEeC----CCCHHHHHHHHH-hccEEEecccccccCcccceEEEEcCCCCceEEEec
Confidence 44555554432 1 12234556 778999999999 599999999999999999999999 5577777
Q ss_pred CccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 656 NQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 656 ~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
..|+..+++ .|++++|.|++++|++|.+++. .+++.+.+..+++++++ .+|||...++++++.|+.-
T Consensus 397 ~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~---~~~~e~~~r~~~~~~~v-~~~~~~~w~~~~l~~l~~~ 463 (726)
T PRK14501 397 MAGAAAELA----EALLVNPNDIEGIAAAIKRALE---MPEEEQRERMQAMQERL-RRYDVHKWASDFLDELREA 463 (726)
T ss_pred ccchhHHhC----cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Confidence 778888876 4899999999999999976552 23445555557788888 7899999999999877643
No 81
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.87 E-value=2.3e-20 Score=207.59 Aligned_cols=264 Identities=16% Similarity=0.122 Sum_probs=183.6
Q ss_pred CCceEEEEcCCCch-HHHHHHHH-----cCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEE
Q 036539 366 GKPDLIIGNYSDGN-LVASVMAS-----KLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFII 439 (749)
Q Consensus 366 ~~pDIIh~h~~~~~-lva~lla~-----~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~II 439 (749)
.+||+||++++..+ ..+.++++ ..++|++++++++... . ..+..+.+|.++
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~--------------~---------~~w~~~~~d~~~ 155 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTC--------------H---------PTWFHKGVTRCF 155 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCc--------------C---------cccccCCCCEEE
Confidence 48999999765532 22223332 2478988877765210 0 011357899999
Q ss_pred eCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccc
Q 036539 440 ASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKED 519 (749)
Q Consensus 440 t~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~ 519 (749)
++|....+. ....|++ ..|+.++++++|.+.+.+..... .
T Consensus 156 ~~s~~~~~~--------------------l~~~g~~--~~ki~v~g~~v~~~f~~~~~~~~------------------~ 195 (382)
T PLN02605 156 CPSEEVAKR--------------------ALKRGLE--PSQIRVYGLPIRPSFARAVRPKD------------------E 195 (382)
T ss_pred ECCHHHHHH--------------------HHHcCCC--HHHEEEECcccCHhhccCCCCHH------------------H
Confidence 999876651 1233665 78999999999876544332211 1
Q ss_pred hhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHc----cCCCeE-EEEEeccCCCCCCcchhHHHHHHHHHHHH
Q 036539 520 NNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKR----LRNLVN-LVIVGAFFDPSKSKDREETAEIKKMHALM 594 (749)
Q Consensus 520 ~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~----~~~~v~-LvIVG~g~~~~~~~d~ee~~~~~~l~~li 594 (749)
.++.+|+ ++++++|+++||....|++..+++++..... ..++.+ ++++|.+.. ..+.+.+.
T Consensus 196 ~r~~~gl--~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~-----------~~~~L~~~- 261 (382)
T PLN02605 196 LRRELGM--DEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK-----------LQSKLESR- 261 (382)
T ss_pred HHHHcCC--CCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH-----------HHHHHHhh-
Confidence 2355787 7788999999999999999999999986531 134565 556665422 12333332
Q ss_pred HHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc------cccccccccCc
Q 036539 595 EKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ------GGPAEIIVDGV 668 (749)
Q Consensus 595 ~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~------GG~~EiI~dg~ 668 (749)
....+|+|+|+.+ ++..+|+ ++|++|.++ .|+|++|||+||+|+|+++. |+.. .+.++.
T Consensus 262 ---~~~~~v~~~G~~~------~~~~l~~-aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~~-~i~~~g 326 (382)
T PLN02605 262 ---DWKIPVKVRGFVT------NMEEWMG-ACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNVP-YVVDNG 326 (382)
T ss_pred ---cccCCeEEEeccc------cHHHHHH-hCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhHH-HHHhCC
Confidence 2235799999543 6899999 599999865 48999999999999999984 4443 344555
Q ss_pred eEEEECCCCHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 669 SGFHIDPYNGDESSDKIADFFEACKVD-PTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 669 ~G~lv~p~d~e~lA~aI~~~l~~l~~d-p~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
.|+.+ .|+++++++|.+++ .| ++.+++|+++++++. ...+++.+++.+.++.+
T Consensus 327 ~g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~-~~~a~~~i~~~l~~~~~ 380 (382)
T PLN02605 327 FGAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLA-RPEAVFDIVHDLHELVR 380 (382)
T ss_pred ceeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHhh
Confidence 67754 69999999996554 56 999999999999987 77888999988877643
No 82
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.87 E-value=2.8e-20 Score=187.51 Aligned_cols=120 Identities=35% Similarity=0.532 Sum_probs=103.8
Q ss_pred EEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCC-h
Q 036539 537 SMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLR-N 615 (749)
Q Consensus 537 ~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~-~ 615 (749)
|+|++.+.||++.+++++..+.+..++++++++|++.. .....+.+.+.+..++|.++| .++ .
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~~----~~~~~ 172 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPE------------REYLEELLAALLLLDRVIFLG----GLDPE 172 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCC------------hHHHHHHHHhcCCcccEEEeC----CCCcH
Confidence 89999999999999999999988788999999999977 334444467778889999999 443 3
Q ss_pred HHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEE
Q 036539 616 GELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHI 673 (749)
Q Consensus 616 ~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv 673 (749)
+++..+++ .+|+++.||..|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 173 ~~~~~~~~-~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 173 ELLALLLA-AADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHHHHhh-cCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 44455554 5999999999999999999999999999999999999999999999875
No 83
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.86 E-value=6.9e-20 Score=212.45 Aligned_cols=343 Identities=14% Similarity=0.128 Sum_probs=232.9
Q ss_pred HHHcCCCceEEEEcCCCchHHHHHHHHc--------------CCCcEEEEecCCcccc---cCCCcc-------------
Q 036539 361 LEFLGGKPDLIIGNYSDGNLVASVMASK--------------LGITQATIAHALEKTK---YEDSDV------------- 410 (749)
Q Consensus 361 ~~~l~~~pDIIh~h~~~~~lva~lla~~--------------~gvp~v~t~H~l~~~k---~~~s~~------------- 410 (749)
++.+..+||+||+|.|.++++...+.+. ...+.++|.|++...- ++...+
T Consensus 155 l~~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl 234 (601)
T TIGR02094 155 LRALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGL 234 (601)
T ss_pred HHHcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCC
Confidence 3445679999999999998877664321 1356899999985433 221111
Q ss_pred hhhhcCcc-cc---cchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecC
Q 036539 411 KWKELDPK-YH---FSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAP 486 (749)
Q Consensus 411 ~~~~~~~~-y~---f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpn 486 (749)
.+..+... .. ...++..-..++..||.|.+||+...+-.++..+. + ..+.+....++.=|.|
T Consensus 235 ~~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~-----------l---~~~~~~~~~~i~gItN 300 (601)
T TIGR02094 235 PREQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQF-----------L---YPGYEEEEVPIGYVTN 300 (601)
T ss_pred CHHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHh-----------h---hhhcccccCCccceeC
Confidence 11111000 00 01234556778999999999998665511111100 0 0011111335788999
Q ss_pred CCCCCCCCCCchHHhhhhccchh---------------------h-HHhhccccchh---------------------hh
Q 036539 487 GADQSVYFPYTEKQRRLTKFHPE---------------------I-EELLYNKEDNN---------------------EH 523 (749)
Q Consensus 487 GvD~~~f~p~~~~~~rl~~~~~~---------------------~-~~~l~~~~~~~---------------------~~ 523 (749)
|||...+.|.+...-..+...+. + +.+.-++.... ..
T Consensus 301 GId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~ 380 (601)
T TIGR02094 301 GVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMA 380 (601)
T ss_pred CccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhh
Confidence 99999987654322100000000 0 11111111111 13
Q ss_pred cCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHcc--C--CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCC
Q 036539 524 IGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRL--R--NLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL 599 (749)
Q Consensus 524 ~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~--~--~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L 599 (749)
+|...+++.++|++++|+..+||++.++.++.++.+. . .+++||+.|.+.. .|..-.+.++.+..++++...
T Consensus 381 ~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p----~d~~gk~~i~~i~~la~~~~~ 456 (601)
T TIGR02094 381 TDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHP----ADGEGKEIIQRIVEFSKRPEF 456 (601)
T ss_pred hccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----ccchHHHHHHHHHHHHhcccC
Confidence 5555678899999999999999999999998888642 1 3699999999965 344555677888888887556
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEE-CCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC--
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQ-PAL-YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDP-- 675 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~-PS~-~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p-- 675 (749)
.++|.|+- ..+. .+.+.+-.++|++++ ||+ +|++|++-+=||..|.+.+++--|...|.. ++.+||.|.+
T Consensus 457 ~~kv~f~~----~Yd~-~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~ 530 (601)
T TIGR02094 457 RGRIVFLE----NYDI-NLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGE 530 (601)
T ss_pred CCCEEEEc----CCCH-HHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCc
Confidence 77999986 3333 555555557999999 999 999999999999999999999999888887 6779999984
Q ss_pred ----------CCHHHHHHHHHHHH-HHhcCC-----HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 676 ----------YNGDESSDKIADFF-EACKVD-----PTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 676 ----------~d~e~lA~aI~~~l-~~l~~d-----p~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
.|++++-++|.+.+ ....++ |..|.+|.++|++.....|||++++++|.++|
T Consensus 531 ~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 531 EYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred cccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 79999999998766 333343 67799999999987666899999999999987
No 84
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.84 E-value=5.8e-19 Score=185.81 Aligned_cols=291 Identities=24% Similarity=0.308 Sum_probs=207.9
Q ss_pred ceEEEEcCCCchH---HHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 368 PDLIIGNYSDGNL---VASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 368 pDIIh~h~~~~~l---va~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
+|++|.+...... .........+.+.+...|....................+. ............+.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLL---LKRLKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHH---HHHHHHhccccccEEEECCHH
Confidence 5999987765433 3445555677888888887643221111111000000000 000001111246778887765
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
..... ..... ..++.++||+++.+.+.+.. .
T Consensus 161 ~~~~~--------------------~~~~~---~~~~~~~~~~~~~~~~~~~~--------------------------~ 191 (381)
T COG0438 161 LKELL--------------------EALGV---PNKIVVIPNGIDTEKFAPAR--------------------------I 191 (381)
T ss_pred HHHHH--------------------HHhCC---CCCceEecCCcCHHHcCccc--------------------------c
Confidence 42200 00011 23788999999988776540 1
Q ss_pred CccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE
Q 036539 525 GYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR 604 (749)
Q Consensus 525 g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 604 (749)
++.....+..++++||+.+.||++.+++++..+....++++++++|.+... .+.+.+++.+++..+++.
T Consensus 192 ~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-----------~~~~~~~~~~~~~~~~v~ 260 (381)
T COG0438 192 GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-----------REELEKLAKKLGLEDNVK 260 (381)
T ss_pred CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-----------HHHHHHHHHHhCCCCcEE
Confidence 110011147899999999999999999999999887666899999999761 245566888888888999
Q ss_pred EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHH
Q 036539 605 WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDK 684 (749)
Q Consensus 605 flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~a 684 (749)
|+| .++.+++..+++. +|++++||.+|+||++++|||++|+|||+++.+|..|++.++.+|+++++.|.++++++
T Consensus 261 ~~g----~~~~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 335 (381)
T COG0438 261 FLG----YVPDEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADA 335 (381)
T ss_pred Eec----ccCHHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHH
Confidence 999 5667788888884 89999999999999999999999999999999999999998877997777789999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 685 IADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 685 I~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
+..++ ++++.++.+++.+++.+.+.|+|+.+++++.+++...
T Consensus 336 i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (381)
T COG0438 336 LEQLL----EDPELREELGEAARERVEEEFSWERIAEQLLELYEEL 377 (381)
T ss_pred HHHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 97654 6778889999877788778999999999999887654
No 85
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.84 E-value=2.6e-19 Score=199.84 Aligned_cols=262 Identities=14% Similarity=0.112 Sum_probs=177.0
Q ss_pred CCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHH
Q 036539 366 GKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQE 445 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~ 445 (749)
.+||+||++++..++.....++..++|+++..++.... . .+..+.+|.+++.|...
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~------~------------------~w~~~~~d~~~v~s~~~ 158 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLH------K------------------NWITPYSTRYYVATKET 158 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcc------c------------------ccccCCCCEEEECCHHH
Confidence 49999999866554322222345689986554432100 0 11346789999999877
Q ss_pred HhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcC
Q 036539 446 IAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIG 525 (749)
Q Consensus 446 ~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g 525 (749)
.+. ....|++ ..++.++.++++.....+..... .++++|
T Consensus 159 ~~~--------------------l~~~gi~--~~ki~v~GiPv~~~f~~~~~~~~-------------------~~~~~~ 197 (391)
T PRK13608 159 KQD--------------------FIDVGID--PSTVKVTGIPIDNKFETPIDQKQ-------------------WLIDNN 197 (391)
T ss_pred HHH--------------------HHHcCCC--HHHEEEECeecChHhcccccHHH-------------------HHHHcC
Confidence 651 1234665 67888887877644322221111 123466
Q ss_pred ccCCCCCcE-EEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE
Q 036539 526 YLADRKKPI-IFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR 604 (749)
Q Consensus 526 ~l~~~~k~v-Il~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 604 (749)
+ ++++++ +++.|+++..||++.+++++.+ ..+++++++++|+.. +...++.+.++..++|.
T Consensus 198 l--~~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~~~~~~vvv~G~~~-------------~l~~~l~~~~~~~~~v~ 259 (391)
T PRK13608 198 L--DPDKQTILMSAGAFGVSKGFDTMITDILA---KSANAQVVMICGKSK-------------ELKRSLTAKFKSNENVL 259 (391)
T ss_pred C--CCCCCEEEEECCCcccchhHHHHHHHHHh---cCCCceEEEEcCCCH-------------HHHHHHHHHhccCCCeE
Confidence 6 455555 5678899989999999998632 235788887765432 11122333344556899
Q ss_pred EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC-ccc----cccccccCceEEEECCCCHH
Q 036539 605 WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN-QGG----PAEIIVDGVSGFHIDPYNGD 679 (749)
Q Consensus 605 flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~-~GG----~~EiI~dg~~G~lv~p~d~e 679 (749)
++|+. +++..+|+ ++|++|. ++.|+|+.|||+||+|+|+++ .+| ....+.+...|++ +.|++
T Consensus 260 ~~G~~------~~~~~~~~-~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~--~~~~~ 326 (391)
T PRK13608 260 ILGYT------KHMNEWMA-SSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI--ADTPE 326 (391)
T ss_pred EEecc------chHHHHHH-hhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE--eCCHH
Confidence 99953 36899999 5999997 357999999999999999985 333 1223345556665 45899
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 680 ESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 680 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+++++|.+ +++|++.+++|++++++.. +.|+++.+++.+++++.
T Consensus 327 ~l~~~i~~----ll~~~~~~~~m~~~~~~~~-~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 327 EAIKIVAS----LTNGNEQLTNMISTMEQDK-IKYATQTICRDLLDLIG 370 (391)
T ss_pred HHHHHHHH----HhcCHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhh
Confidence 99999955 4589999999999999986 67999999999998764
No 86
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.80 E-value=9.2e-18 Score=189.78 Aligned_cols=324 Identities=13% Similarity=0.057 Sum_probs=216.5
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhh
Q 036539 356 ATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNA 434 (749)
Q Consensus 356 ~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~ 434 (749)
.+..+.... ..-|+|-.|.....+++.++.++. ..++.+..|.. +|.+++... + + ....-...|-.
T Consensus 122 FA~~i~~~~-~~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiP----FPs~eifr~-L-P------~r~~ll~glL~ 188 (487)
T TIGR02398 122 FAEAACLEA-AEGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTP----FPSADVFNI-L-P------WREQIIGSLLC 188 (487)
T ss_pred HHHHHHHhc-CCCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCC----CCChHHHhh-C-C------chHHHHHHHhc
Confidence 333444443 234899999999888888887653 46777888864 443332211 1 0 00112336778
Q ss_pred CCEEEeCCHHHHhhcCCCCCccccc--cccc--cccc---------hhhhccCCCCC--CceEEecCCCCCCCCCCCchH
Q 036539 435 TDFIIASTFQEIAGSKDRPGQYESH--TAFT--LPGL---------CRVVKGIDVLD--PKFNIAAPGADQSVYFPYTEK 499 (749)
Q Consensus 435 aD~IIt~S~~~~~~~~~~~~qye~~--~~~~--~p~l---------y~v~~Gi~~~~--~ki~VIpnGvD~~~f~p~~~~ 499 (749)
||.|=..|...+..+.+...+.-.. ..-+ .+.. -....++.+.. -++.++|.|||++.|.+....
T Consensus 189 aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~ 268 (487)
T TIGR02398 189 CDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAA 268 (487)
T ss_pred CCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcC
Confidence 9999888887765433322111000 0000 0000 00000122112 257889999999988654221
Q ss_pred H---hhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC----eEEEEEecc
Q 036539 500 Q---RRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNL----VNLVIVGAF 572 (749)
Q Consensus 500 ~---~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g 572 (749)
. .+.. ..++.+| ++++|++++|++..||+...++||.++.+.+|+ +.|+++|.+
T Consensus 269 ~~~~~~~~--------------~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~p 329 (487)
T TIGR02398 269 ASIREMME--------------RIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVP 329 (487)
T ss_pred chHHHHHH--------------HHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCC
Confidence 1 1111 1122333 578999999999999999999999999877775 799999987
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHc-------CCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHH
Q 036539 573 FDPSKSKDREETAEIKKMHALMEKY-------QLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEA 645 (749)
Q Consensus 573 ~~~~~~~d~ee~~~~~~l~~li~~~-------~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEA 645 (749)
.. +..++..+..+++.+++.+. +..+-+.+.+ .++.+++..+|+ +|||++.+|..||++|+..|+
T Consensus 330 sr---~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~----~v~~~el~alYr-~ADV~lvT~lrDGmNLVa~Ey 401 (487)
T TIGR02398 330 AA---SGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTR----SLPYEEVSAWFA-MADVMWITPLRDGLNLVAKEY 401 (487)
T ss_pred Cc---ccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcC----CCCHHHHHHHHH-hCCEEEECccccccCcchhhH
Confidence 54 22334445566677776664 3334456666 788999999999 599999999999999999999
Q ss_pred HHcCC----cEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 036539 646 MNCGL----PTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYAN 721 (749)
Q Consensus 646 Ma~Gl----PVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~ 721 (749)
|+|+. |+|.|..+|.++.+. .+++++|.|++++|++|.+++. -.++.+++--+..++++ .++|....++
T Consensus 402 va~~~~~~GvLILSefaGaa~~l~---~AllVNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v-~~~d~~~W~~ 474 (487)
T TIGR02398 402 VAAQGLLDGVLVLSEFAGAAVELK---GALLTNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAV-NYYDVQRWAD 474 (487)
T ss_pred HhhhcCCCCCEEEeccccchhhcC---CCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHH
Confidence 99998 999999999987773 5899999999999999987663 34555555556666666 7888888888
Q ss_pred HHHHH
Q 036539 722 KMLNM 726 (749)
Q Consensus 722 ~ll~l 726 (749)
.+++-
T Consensus 475 ~fl~~ 479 (487)
T TIGR02398 475 EFLAA 479 (487)
T ss_pred HHHHH
Confidence 87753
No 87
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.79 E-value=4.6e-18 Score=187.76 Aligned_cols=275 Identities=14% Similarity=0.121 Sum_probs=178.2
Q ss_pred CCceEEEEcCC-CchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 366 GKPDLIIGNYS-DGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 366 ~~pDIIh~h~~-~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
.+||+||+|.. ..++.++++++.+|+|++.+-+++... + .+..+... .......+.+|.++++|..
T Consensus 85 ~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~-----~-~~~~~~~~-------~~r~~~~~~ad~~~~~s~~ 151 (365)
T TIGR00236 85 EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTG-----D-RYSPMPEE-------INRQLTGHIADLHFAPTEQ 151 (365)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcC-----C-CCCCCccH-------HHHHHHHHHHHhccCCCHH
Confidence 48999999964 346778889999999998665543110 0 00000000 0011223458999999987
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
..+.. ...|++ ..++.+++||+....+.+...... ...++.+
T Consensus 152 ~~~~l--------------------~~~G~~--~~~I~vign~~~d~~~~~~~~~~~----------------~~~~~~~ 193 (365)
T TIGR00236 152 AKDNL--------------------LRENVK--ADSIFVTGNTVIDALLTNVEIAYS----------------SPVLSEF 193 (365)
T ss_pred HHHHH--------------------HHcCCC--cccEEEeCChHHHHHHHHHhhccc----------------hhHHHhc
Confidence 76621 123665 779999999973222211110000 0011223
Q ss_pred CccCCCCCcEEEEEe-ccc-CCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 525 GYLADRKKPIIFSMA-RLD-VVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 525 g~l~~~~k~vIl~vG-RL~-~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
+. +++++++.+ |.. ..||++.+++|+.++.+..++++++++|++.. ...+. +.+..+..++
T Consensus 194 ~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~----------~~~~~---~~~~~~~~~~ 256 (365)
T TIGR00236 194 GE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNP----------VVREP---LHKHLGDSKR 256 (365)
T ss_pred CC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCCh----------HHHHH---HHHHhCCCCC
Confidence 31 234555554 543 45899999999999877678899998875533 01111 3334456678
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHH
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT-NQGGPAEIIVDGVSGFHIDPYNGDES 681 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat-~~GG~~EiI~dg~~G~lv~p~d~e~l 681 (749)
|.|+| .+...++..++++ +|+++.+| |..++|||+||+|||++ +.|+..|++.++ +|+++ +.|++++
T Consensus 257 v~~~~----~~~~~~~~~~l~~-ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-~~d~~~i 324 (365)
T TIGR00236 257 VHLIE----PLEYLDFLNLAAN-SHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-GTDKENI 324 (365)
T ss_pred EEEEC----CCChHHHHHHHHh-CCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-CCCHHHH
Confidence 99999 6667788999995 99999987 66789999999999996 778888988766 56666 4799999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 682 SDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 682 A~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
+++|.+ +++|++.+++|++++..+. +..+++.+++.+.+
T Consensus 325 ~~ai~~----ll~~~~~~~~~~~~~~~~g-~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 325 TKAAKR----LLTDPDEYKKMSNASNPYG-DGEASERIVEELLN 363 (365)
T ss_pred HHHHHH----HHhChHHHHHhhhcCCCCc-CchHHHHHHHHHHh
Confidence 999965 4479999998887663222 33455555555444
No 88
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.79 E-value=2.4e-17 Score=180.13 Aligned_cols=245 Identities=15% Similarity=0.133 Sum_probs=167.2
Q ss_pred Cc-eEEEEcCCCchH---HHHHH--HHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEe
Q 036539 367 KP-DLIIGNYSDGNL---VASVM--ASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIA 440 (749)
Q Consensus 367 ~p-DIIh~h~~~~~l---va~ll--a~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt 440 (749)
++ |+||.+++.... ...++ .++.|+|++.++|+++....... .+ + ...+...++.||.||+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~---------~~-~---~~~~~~~~~~aD~iI~ 129 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSN---------YY-L---MKEEIDMLNLADVLIV 129 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhcccc---------ch-h---hHHHHHHHHhCCEEEE
Confidence 66 999999876421 12222 23448999999999854321100 00 0 1335668899999999
Q ss_pred CCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccch
Q 036539 441 STFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDN 520 (749)
Q Consensus 441 ~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 520 (749)
.|....+.. ..+|++ ..++.+++++.+.....+..
T Consensus 130 ~S~~~~~~l--------------------~~~g~~--~~~i~~~~~~~~~~~~~~~~----------------------- 164 (333)
T PRK09814 130 HSKKMKDRL--------------------VEEGLT--TDKIIVQGIFDYLNDIELVK----------------------- 164 (333)
T ss_pred CCHHHHHHH--------------------HHcCCC--cCceEecccccccccccccc-----------------------
Confidence 999887621 223554 55777776655432110000
Q ss_pred hhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC
Q 036539 521 NEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600 (749)
Q Consensus 521 ~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 600 (749)
.+..++.|+|+|++.+.+++. + ..++++|+|+|+|+. .+ ...
T Consensus 165 -------~~~~~~~i~yaG~l~k~~~l~---~-------~~~~~~l~i~G~g~~------------~~---------~~~ 206 (333)
T PRK09814 165 -------TPSFQKKINFAGNLEKSPFLK---N-------WSQGIKLTVFGPNPE------------DL---------ENS 206 (333)
T ss_pred -------cccCCceEEEecChhhchHHH---h-------cCCCCeEEEECCCcc------------cc---------ccC
Confidence 023456899999999543211 1 236799999999976 11 245
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCC-----------CCCCcHHHHHHHHcCCcEEEcCccccccccccCce
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL-----------YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVS 669 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~-----------~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~ 669 (749)
++|.|+| +++.+++..+++. |+.+.+.. .-++|.++.|+||||+|||+++.++..|+|+++.+
T Consensus 207 ~~V~f~G----~~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~ 280 (333)
T PRK09814 207 ANISYKG----WFDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGL 280 (333)
T ss_pred CCeEEec----CCCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCc
Confidence 7899999 8889999999985 44443321 13588999999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 036539 670 GFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANK 722 (749)
Q Consensus 670 G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ 722 (749)
|++++ +.++++++|.. -+++.+++|++++++.+ +++.-..++++
T Consensus 281 G~~v~--~~~el~~~l~~------~~~~~~~~m~~n~~~~~-~~~~~g~~~~~ 324 (333)
T PRK09814 281 GFVVD--SLEELPEIIDN------ITEEEYQEMVENVKKIS-KLLRNGYFTKK 324 (333)
T ss_pred eEEeC--CHHHHHHHHHh------cCHHHHHHHHHHHHHHH-HHHhcchhHHH
Confidence 99998 77888888854 24577899999999877 55554444444
No 89
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.76 E-value=2.6e-16 Score=164.11 Aligned_cols=389 Identities=15% Similarity=0.204 Sum_probs=241.9
Q ss_pred eeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCC---ccCCccc
Q 036539 238 LFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGT---KCNQELE 314 (749)
Q Consensus 238 ~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~---~~~~~~e 314 (749)
...++++.|...- .||-+++..--+|++.+. -..+ +++|.|..+.-.... ...+..+
T Consensus 43 ~ktvgfFHPYCNA----------GGGGErVLW~Avr~~q~k------~~n~----~~viYsGD~n~t~~~IL~k~k~~F~ 102 (465)
T KOG1387|consen 43 VKTVGFFHPYCNA----------GGGGERVLWKAVRITQRK------FPNN----VIVIYSGDFNVTPENILNKVKNKFD 102 (465)
T ss_pred ceEEEEecccccC----------CCCcceehhHHHHHHHHh------CCCc----eEEEEeCCCCCCHHHHHHHHHHhcC
Confidence 3568888777753 377788888677765321 1222 234666654211000 0001111
Q ss_pred cccCccceEEEEecCccCCccccccccccccccchHHHHHH---HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCC
Q 036539 315 PIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQD---ATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGI 391 (749)
Q Consensus 315 ~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~---~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gv 391 (749)
-.-+..++..+.+..+. |++ ...|+...-..+. +.-.+-+..+..|||-+-....+ +.-.+.++..++
T Consensus 103 idlDs~nI~Fi~Lk~R~-------lVe-a~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~-fs~p~~r~l~~~ 173 (465)
T KOG1387|consen 103 IDLDSDNIFFIYLKLRY-------LVE-ASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYP-FSYPIFRRLRRI 173 (465)
T ss_pred ceecccceEEEEEEeee-------eee-cccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCc-chhHHHHHHccC
Confidence 11223355555554432 222 2234433222222 22223333466899988554332 112234446789
Q ss_pred cEEEEecCCcccc-c-------CCC-cchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCcccccccc
Q 036539 392 TQATIAHALEKTK-Y-------EDS-DVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAF 462 (749)
Q Consensus 392 p~v~t~H~l~~~k-~-------~~s-~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~ 462 (749)
|++.-+|-.-..+ + +.+ -..|..+.....|++.+ ..+=..||.++++|.=........|
T Consensus 174 ~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~lY---~~~G~~ad~vm~NssWT~nHI~qiW--------- 241 (465)
T KOG1387|consen 174 PVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALLY---QSAGSKADIVMTNSSWTNNHIKQIW--------- 241 (465)
T ss_pred ceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHHH---HhccccceEEEecchhhHHHHHHHh---------
Confidence 9999889321110 0 011 22233222111122211 1233568999998854333222221
Q ss_pred ccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEeccc
Q 036539 463 TLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLD 542 (749)
Q Consensus 463 ~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~ 542 (749)
+ ..+..+|.|..+.+.... ..+- ...+.+.++++|.+.
T Consensus 242 ------------~--~~~~~iVyPPC~~e~lks---------------------------~~~t-e~~r~~~ll~l~Q~R 279 (465)
T KOG1387|consen 242 ------------Q--SNTCSIVYPPCSTEDLKS---------------------------KFGT-EGERENQLLSLAQFR 279 (465)
T ss_pred ------------h--ccceeEEcCCCCHHHHHH---------------------------Hhcc-cCCcceEEEEEeecC
Confidence 1 235667877666542211 1111 145678899999999
Q ss_pred CCCCHHHHHHHHHHhHcc------CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChH
Q 036539 543 VVKNLTGLTEWYGKNKRL------RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNG 616 (749)
Q Consensus 543 ~~Kgl~~LieA~~~l~~~------~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~ 616 (749)
|.||.. +++.++....+ .++++|+|+|+-.. .++++..+.|+.++++++++++|.|-- .++.+
T Consensus 280 PEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRn------eeD~ervk~Lkd~a~~L~i~~~v~F~~----N~Py~ 348 (465)
T KOG1387|consen 280 PEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRN------EEDEERVKSLKDLAEELKIPKHVQFEK----NVPYE 348 (465)
T ss_pred cccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCC------hhhHHHHHHHHHHHHhcCCccceEEEe----cCCHH
Confidence 999998 55555443322 35689999999876 445667888999999999999999988 78899
Q ss_pred HHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccc-ccccc---CceEEEECCCCHHHHHHHHHHHHHHh
Q 036539 617 ELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPA-EIIVD---GVSGFHIDPYNGDESSDKIADFFEAC 692 (749)
Q Consensus 617 el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~-EiI~d---g~~G~lv~p~d~e~lA~aI~~~l~~l 692 (749)
++..++.. |.+.|..-..|.||+.++|+||+|+-.|+.+.||+. |||.+ ..+||+.+ +.++.|++|.+++.
T Consensus 349 ~lv~lL~~-a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~-- 423 (465)
T KOG1387|consen 349 KLVELLGK-ATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVK-- 423 (465)
T ss_pred HHHHHhcc-ceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHH--
Confidence 99999995 999999999999999999999999999999999974 56643 35899985 77889999988764
Q ss_pred cCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 693 KVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 693 ~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
.|++.+..|+++||..+ .+|+-....+.+.+.+
T Consensus 424 -~~~~~r~~~r~~AR~s~-~RFsE~~F~kd~~~~i 456 (465)
T KOG1387|consen 424 -LNYDERNMMRRNARKSL-ARFGELKFDKDWENPI 456 (465)
T ss_pred -cCHHHHHHHHHHHHHHH-HHhhHHHHHHhHhHHH
Confidence 68888999999999987 7888777776666543
No 90
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.75 E-value=2.6e-16 Score=185.92 Aligned_cols=341 Identities=14% Similarity=0.122 Sum_probs=228.7
Q ss_pred HHcCCCceEEEEcCCCchHHHH-----HHHHc----------CCCcEEEEecCCcccc---cCCCc-------------c
Q 036539 362 EFLGGKPDLIIGNYSDGNLVAS-----VMASK----------LGITQATIAHALEKTK---YEDSD-------------V 410 (749)
Q Consensus 362 ~~l~~~pDIIh~h~~~~~lva~-----lla~~----------~gvp~v~t~H~l~~~k---~~~s~-------------~ 410 (749)
+.+..+||+||+|.+.++++.. ++... .+.+.++|.|++...- ++... +
T Consensus 243 r~lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl 322 (778)
T cd04299 243 RALGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGL 322 (778)
T ss_pred HHhCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCC
Confidence 4456689999999999988777 44321 1356799999984332 22111 1
Q ss_pred hhhhcCccc-cc----chhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEec
Q 036539 411 KWKELDPKY-HF----SCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAA 485 (749)
Q Consensus 411 ~~~~~~~~y-~f----~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIp 485 (749)
.+..+.... .+ ..++..-..++..|+.|.+||.-.-.-.++.+ .....|.+.-..+|.-|.
T Consensus 323 ~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf--------------~~~~~g~p~~~~~i~~IT 388 (778)
T cd04299 323 SRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMF--------------AGLWPGFPVEEVPIGHVT 388 (778)
T ss_pred CHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHh--------------hhhhccCCcccCceecee
Confidence 111111000 00 12345567789999999999975422111111 011223333345688899
Q ss_pred CCCCCCCCC-CCchHHh-h--------------------------hhccchhhHHhhccccch---------------hh
Q 036539 486 PGADQSVYF-PYTEKQR-R--------------------------LTKFHPEIEELLYNKEDN---------------NE 522 (749)
Q Consensus 486 nGvD~~~f~-p~~~~~~-r--------------------------l~~~~~~~~~~l~~~~~~---------------~~ 522 (749)
|||+...+. |....-- + +.+.+....+.|...... -.
T Consensus 389 NGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~ 468 (778)
T cd04299 389 NGVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIG 468 (778)
T ss_pred CCcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhh
Confidence 999998887 4321110 0 000000000111111000 00
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHcc----CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcC
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRL----RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQ 598 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~ 598 (749)
..+...+++.++|+++.|+..+|+.+.++..+.++.+. ...++||+.|.+.. .|....+.++.+.+++++..
T Consensus 469 ~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP----~d~~gK~iIk~i~~~a~~p~ 544 (778)
T cd04299 469 EADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHP----ADEPGKELIQEIVEFSRRPE 544 (778)
T ss_pred hcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----cchHHHHHHHHHHHHHhCcC
Confidence 12333467888999999999999999999988877541 13599999999865 45555777888888888666
Q ss_pred CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC-
Q 036539 599 LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDP- 675 (749)
Q Consensus 599 L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p- 675 (749)
..++|.|+- ..+. .+.+.+-.++|++++||+ +|++|++-+=||.-|.+.+++--|...|-- ++.|||.|.+
T Consensus 545 ~~~kVvfle----~Yd~-~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~ 618 (778)
T cd04299 545 FRGRIVFLE----DYDM-ALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDG 618 (778)
T ss_pred CCCcEEEEc----CCCH-HHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCC
Confidence 778999986 3444 555555557999999999 999999999999999999999999999987 7899999988
Q ss_pred -----------CCHHHHHHHHHHHHH-HhcC-----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 036539 676 -----------YNGDESSDKIADFFE-ACKV-----DPTYWNKFSTEGLKRINECYTWKIYANKMLNM 726 (749)
Q Consensus 676 -----------~d~e~lA~aI~~~l~-~l~~-----dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 726 (749)
.|++++-+.|.+.+. ...+ .|..|.+|.+++++.+...|||++++++|.+-
T Consensus 619 ~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~ 686 (778)
T cd04299 619 DEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVER 686 (778)
T ss_pred ccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 566777777765443 2333 38899999999999888899999999999874
No 91
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.75 E-value=1.4e-16 Score=176.46 Aligned_cols=250 Identities=13% Similarity=0.090 Sum_probs=160.7
Q ss_pred CCCceEEEEcCCC-chHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCH
Q 036539 365 GGKPDLIIGNYSD-GNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTF 443 (749)
Q Consensus 365 ~~~pDIIh~h~~~-~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~ 443 (749)
..+||+||++.+. ........+++.|+|++...|.. .|..... .. ....+.+|.+++++.
T Consensus 83 ~~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~--------~~-~~~~~~~d~i~~~~~ 143 (380)
T PRK00025 83 AEPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQG--------RA-FKIAKATDHVLALFP 143 (380)
T ss_pred HcCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCch--------HH-HHHHHHHhhheeCCc
Confidence 3489999987643 23322334566799987654421 1211000 01 113577899999886
Q ss_pred HHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhh
Q 036539 444 QEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEH 523 (749)
Q Consensus 444 ~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 523 (749)
...+. + ...|+ ++.++.|.+......+.... ..+++
T Consensus 144 ~~~~~-------~-------------~~~g~-----~~~~~G~p~~~~~~~~~~~~-------------------~~~~~ 179 (380)
T PRK00025 144 FEAAF-------Y-------------DKLGV-----PVTFVGHPLADAIPLLPDRA-------------------AARAR 179 (380)
T ss_pred cCHHH-------H-------------HhcCC-----CeEEECcCHHHhcccccChH-------------------HHHHH
Confidence 55441 1 01122 24555555433221111111 11244
Q ss_pred cCccCCCCCcEEEE-Ee-cccCC-CCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHc-CC
Q 036539 524 IGYLADRKKPIIFS-MA-RLDVV-KNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKY-QL 599 (749)
Q Consensus 524 ~g~l~~~~k~vIl~-vG-RL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~-~L 599 (749)
+|+ ++++++|+. .| |.... ++++.+++++..+.+..++++++++|+++. ..+++.+.++++ ++
T Consensus 180 l~~--~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~-----------~~~~~~~~~~~~~~~ 246 (380)
T PRK00025 180 LGL--DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK-----------RREQIEEALAEYAGL 246 (380)
T ss_pred cCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh-----------hHHHHHHHHhhcCCC
Confidence 666 556666544 44 44444 457899999999987778899999987332 145566667666 55
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc-----------------Ccccccc
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT-----------------NQGGPAE 662 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat-----------------~~GG~~E 662 (749)
. +.+.. +++..+|+ ++|++|++| |.+.+|||+||+|+|++ +.++.++
T Consensus 247 ~--v~~~~--------~~~~~~~~-~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~ 310 (380)
T PRK00025 247 E--VTLLD--------GQKREAMA-AADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPN 310 (380)
T ss_pred C--eEEEc--------ccHHHHHH-hCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHH
Confidence 3 54432 36889999 599999997 88989999999999987 5677778
Q ss_pred ccccCc--eEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 036539 663 IIVDGV--SGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRI 710 (749)
Q Consensus 663 iI~dg~--~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v 710 (749)
++.++. .+++.+..|++.+++++.+ +++|++.+++|++++.+..
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~l~~~i~~----ll~~~~~~~~~~~~~~~~~ 356 (380)
T PRK00025 311 LLAGRELVPELLQEEATPEKLARALLP----LLADGARRQALLEGFTELH 356 (380)
T ss_pred HhcCCCcchhhcCCCCCHHHHHHHHHH----HhcCHHHHHHHHHHHHHHH
Confidence 887764 5577788899999999965 4589999999999975554
No 92
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.75 E-value=1.2e-16 Score=175.65 Aligned_cols=267 Identities=16% Similarity=0.131 Sum_probs=174.3
Q ss_pred CCceEEEEcCCC-chHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 366 GKPDLIIGNYSD-GNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 366 ~~pDIIh~h~~~-~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
.+||+||+|... ..+.+.++++..|+|++++.|+... +... ..|.. ......+.+|.++++|..
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s--~~~~-~~~~~------------~r~~~~~~ad~~~~~s~~ 151 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS--FDRG-MPDEE------------NRHAIDKLSDLHFAPTEE 151 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc--CCCC-CCchH------------HHHHHHHHhhhccCCCHH
Confidence 389999999644 3566778888899999877665421 1000 01110 011245678999999987
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCC-CCCCCCCCchHHhhhhccchhhHHhhccccchhhh
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGA-DQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEH 523 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGv-D~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 523 (749)
..+ +....|++ ..++.+++|++ |...+.+..... . ..++.
T Consensus 152 ~~~--------------------~l~~~G~~--~~kI~vign~v~d~~~~~~~~~~~-~----------------~~~~~ 192 (363)
T cd03786 152 ARR--------------------NLLQEGEP--PERIFVVGNTMIDALLRLLELAKK-E----------------LILEL 192 (363)
T ss_pred HHH--------------------HHHHcCCC--cccEEEECchHHHHHHHHHHhhcc-c----------------hhhhh
Confidence 765 11233665 78999999986 432221111000 0 00123
Q ss_pred cCccCCCCCcEEEEEecccC---CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCC-
Q 036539 524 IGYLADRKKPIIFSMARLDV---VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL- 599 (749)
Q Consensus 524 ~g~l~~~~k~vIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L- 599 (749)
+++ ++++.++++.||... .||++.+++++.++.+. ++.+++.|++.. .+.+++.+.++++
T Consensus 193 ~~~--~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~------------~~~l~~~~~~~~~~ 256 (363)
T cd03786 193 LGL--LPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRT------------RPRIREAGLEFLGH 256 (363)
T ss_pred ccc--CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCCh------------HHHHHHHHHhhccC
Confidence 454 444556778899875 79999999999988653 466666666554 4677777888876
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCH
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ-GGPAEIIVDGVSGFHIDPYNG 678 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~-GG~~EiI~dg~~G~lv~p~d~ 678 (749)
.++|+|+| .....++..+++ +||++|.||. | .+.|||++|+|||+++. +...+.+.+| .++.+. .|+
T Consensus 257 ~~~v~~~~----~~~~~~~~~l~~-~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g-~~~~~~-~~~ 324 (363)
T cd03786 257 HPNVLLIS----PLGYLYFLLLLK-NADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESG-TNVLVG-TDP 324 (363)
T ss_pred CCCEEEEC----CcCHHHHHHHHH-cCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhee-eEEecC-CCH
Confidence 67899998 555678999999 4999999984 4 47899999999999864 4456666544 233332 268
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
++++++|.++ ++++..+.+|. ...|.-...++++.+
T Consensus 325 ~~i~~~i~~l----l~~~~~~~~~~-------~~~~~~~~a~~~I~~ 360 (363)
T cd03786 325 EAILAAIEKL----LSDEFAYSLMS-------INPYGDGNASERIVE 360 (363)
T ss_pred HHHHHHHHHH----hcCchhhhcCC-------CCCCCCCHHHHHHHH
Confidence 9999999654 47887776653 234444444555444
No 93
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.72 E-value=4.7e-16 Score=186.14 Aligned_cols=320 Identities=13% Similarity=0.146 Sum_probs=210.5
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..+..+.+..+ .=|+|-+|.....+++.++.++. ..++.+..|.. +|.+++... +. ....-+..|-
T Consensus 220 ~FA~~i~~~~~-~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiP----FPs~Eifr~-LP-------~r~elL~glL 286 (934)
T PLN03064 220 MFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTP----FPSSEIHRT-LP-------SRSELLRSVL 286 (934)
T ss_pred HHHHHHHHhcC-CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCC----CCChHHHhh-CC-------cHHHHHHHHh
Confidence 34444444432 33899999999888888887764 57788899965 444432211 10 1112234788
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC--CceEEecCCCCCCCCCCCchH---Hhhhhccch
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD--PKFNIAAPGADQSVYFPYTEK---QRRLTKFHP 508 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~--~ki~VIpnGvD~~~f~p~~~~---~~rl~~~~~ 508 (749)
.||.|=..|+..+..+....... -++-....++.... .++.+.|-|||.+.|...... ..+...
T Consensus 287 ~aDlIGFqT~~y~rhFl~~c~rl--------Lg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~--- 355 (934)
T PLN03064 287 AADLVGFHTYDYARHFVSACTRI--------LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKE--- 355 (934)
T ss_pred cCCeEEeCCHHHHHHHHHHHHHH--------hCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHH---
Confidence 89999999987766332211100 00000112232222 246678999999888643221 111111
Q ss_pred hhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCe----EEEEEeccCCCCCCcchhHH
Q 036539 509 EIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLV----NLVIVGAFFDPSKSKDREET 584 (749)
Q Consensus 509 ~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v----~LvIVG~g~~~~~~~d~ee~ 584 (749)
.++.+ .++++|++++|++..||+...++||.++.+.+|++ .|+-|..... ..-++..
T Consensus 356 -----------lr~~~-----~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr---~~v~eY~ 416 (934)
T PLN03064 356 -----------LKERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTR---TDVPEYQ 416 (934)
T ss_pred -----------HHHHh-----CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCC---CCcHHHH
Confidence 11222 35679999999999999999999999987777764 3443432221 1112323
Q ss_pred HHHHHHHHHHHHcC-CCCc-----EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC----cEEE
Q 036539 585 AEIKKMHALMEKYQ-LKGQ-----MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL----PTFA 654 (749)
Q Consensus 585 ~~~~~l~~li~~~~-L~~~-----V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~Gl----PVVa 654 (749)
....++.+++.+.+ -.+. |.++. ..++.+++..+|+ .+||+++||..|||+|+..|||+|+. +.|.
T Consensus 417 ~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~---~~l~~eeL~AlY~-~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLIL 492 (934)
T PLN03064 417 KLTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFHALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDSKKGVLIL 492 (934)
T ss_pred HHHHHHHHHHHHHhhhccCCCcceEEEec---cCCCHHHHHHHHH-hCCEEEeCccccccCchHHHHHHhhcCCCCCeEE
Confidence 33344444444432 1122 44443 2578999999999 59999999999999999999999944 4444
Q ss_pred cCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 655 TNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 655 t~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
|..+|.++.+ +..+++|+|.|.+++|++|.+++. -+++.+++..++.++++ ..+||...++.+++-.
T Consensus 493 SEfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~---M~~~Er~~r~~~~~~~V-~~~d~~~Wa~~fl~~L 559 (934)
T PLN03064 493 SEFAGAAQSL--GAGAILVNPWNITEVAASIAQALN---MPEEEREKRHRHNFMHV-TTHTAQEWAETFVSEL 559 (934)
T ss_pred eCCCchHHHh--CCceEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHhhc-ccCCHHHHHHHHHHHH
Confidence 9999998888 446899999999999999987652 38889999999999998 7899999999977633
No 94
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.68 E-value=6.5e-15 Score=169.13 Aligned_cols=169 Identities=11% Similarity=0.127 Sum_probs=145.9
Q ss_pred CcEEEEEe--cccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC---------
Q 036539 532 KPIIFSMA--RLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK--------- 600 (749)
Q Consensus 532 k~vIl~vG--RL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~--------- 600 (749)
+..+++++ |+ +.|.++.+++++.+.....|++.|.+.|.+.. ....+.++++++++++.
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~---------~~~~~~l~~~i~~~~~~~~~~~~~~~ 388 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNND---------NDITQLLEDILEQINEEYNQDKNFFS 388 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCc---------hhHHHHHHHHHHHHHhhhchhhhccc
Confidence 34677788 99 99999999999999999999999999998853 01235666677777665
Q ss_pred --------------------CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 036539 601 --------------------GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660 (749)
Q Consensus 601 --------------------~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~ 660 (749)
.+|.|.| .....++.+.+.. +.++|.+|..|+|+ +.+||+++|+|+| .-|+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~v~f~g----y~~e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~ 459 (519)
T TIGR03713 389 LSEQDENQPILQTDEEQKEKERIAFTT----LTNEEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKVE 459 (519)
T ss_pred cchhhhhhhcccchhhcccccEEEEEe----cCCHHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecCC
Confidence 7899999 4445688999996 99999999999999 9999999999999 6678
Q ss_pred ccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 036539 661 AEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNM 726 (749)
Q Consensus 661 ~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 726 (749)
.++|.|++||+++ +|..+++++|..+| .++..|++++..+.+.+ ++||-+.+.+++.++
T Consensus 460 ~~~V~d~~NG~li--~d~~~l~~al~~~L----~~~~~wn~~~~~sy~~~-~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 460 TDYVEHNKNGYII--DDISELLKALDYYL----DNLKNWNYSLAYSIKLI-DDYSSENIIERLNEL 518 (519)
T ss_pred ceeeEcCCCcEEe--CCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HHhhHHHHHHHHHhh
Confidence 9999999999999 59999999996655 89999999999999998 899999999887764
No 95
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.62 E-value=2.3e-14 Score=161.53 Aligned_cols=330 Identities=16% Similarity=0.145 Sum_probs=182.9
Q ss_pred CCceEEEEcCCCchHHHHHHHH-cCCCcEEEEecCCcccccC---CCcch-------hhhcCcccccchhhhHHHHHhhh
Q 036539 366 GKPDLIIGNYSDGNLVASVMAS-KLGITQATIAHALEKTKYE---DSDVK-------WKELDPKYHFSCQFIADTIAMNA 434 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~-~~gvp~v~t~H~l~~~k~~---~s~~~-------~~~~~~~y~f~~~~~~e~~a~~~ 434 (749)
...-+.|+|-|..+....++.+ ...|..|+|.|+.-...+. ..++| +......+....+...|+.+.+.
T Consensus 142 ~~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~ 221 (633)
T PF05693_consen 142 KPKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHY 221 (633)
T ss_dssp SEEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHH
T ss_pred CCcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHh
Confidence 3455778999987554444433 3467789999986333221 11111 22222233444566778889999
Q ss_pred CCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHH--
Q 036539 435 TDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEE-- 512 (749)
Q Consensus 435 aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~-- 512 (749)
||.+.|+|.-.+...+..++ ...=.|+|||+|.+.|....+.......-..+|.+
T Consensus 222 AdvFTTVSeITa~Ea~~LL~-----------------------r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv 278 (633)
T PF05693_consen 222 ADVFTTVSEITAKEAEHLLK-----------------------RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFV 278 (633)
T ss_dssp SSEEEESSHHHHHHHHHHHS-----------------------S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHH
T ss_pred cCeeeehhhhHHHHHHHHhC-----------------------CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHH
Confidence 99999999876653222111 11124789999999887665433322222233333
Q ss_pred --hhccccchhhhcCccCCCCCcEEEEEeccc-CCCCHHHHHHHHHHhHcc----CCC---eEEEEEeccCCCCCCcchh
Q 036539 513 --LLYNKEDNNEHIGYLADRKKPIIFSMARLD-VVKNLTGLTEWYGKNKRL----RNL---VNLVIVGAFFDPSKSKDRE 582 (749)
Q Consensus 513 --~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~-~~Kgl~~LieA~~~l~~~----~~~---v~LvIVG~g~~~~~~~d~e 582 (749)
.+++. +.+ .+.+..+|++.||.+ +.||+|.++||++++... ..+ +-|+|+=... .+.+.|
T Consensus 279 ~~~f~g~------~df-d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~---~~~~ve 348 (633)
T PF05693_consen 279 RGHFYGH------YDF-DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKT---NSFNVE 348 (633)
T ss_dssp HHHSTT---------S--GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SE---EEE-HH
T ss_pred HHHhccc------CCC-CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCcc---CCcCHH
Confidence 22222 122 123456788899998 699999999999998531 222 2344443221 111111
Q ss_pred HHH----------------------------------------------------------------------HHHHHHH
Q 036539 583 ETA----------------------------------------------------------------------EIKKMHA 592 (749)
Q Consensus 583 e~~----------------------------------------------------------------------~~~~l~~ 592 (749)
... ..+.+..
T Consensus 349 ~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn 428 (633)
T PF05693_consen 349 SLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILN 428 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHH
Confidence 111 1122333
Q ss_pred HHHHcCCCC------cEEEecC---ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccc
Q 036539 593 LMEKYQLKG------QMRWIAA---QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEI 663 (749)
Q Consensus 593 li~~~~L~~------~V~flG~---~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~Ei 663 (749)
.+.+.+|.+ +|.|++- ..+.+-+-+.+.++.. +|+.|+||+||++|.|-+|+.++|+|+|+|+..|....
T Consensus 429 ~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~G-cdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~ 507 (633)
T PF05693_consen 429 MIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRG-CDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCW 507 (633)
T ss_dssp HHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHH-SSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHH
T ss_pred HHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhcc-CceeeeccccccccCChHHHhhcCCceeeccchhHHHH
Confidence 333333321 3555551 2234445578888885 99999999999999999999999999999999997654
Q ss_pred ccc-----CceEEEE-C--CCCHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 664 IVD-----GVSGFHI-D--PYNGDESSDKIADFFEACK-VDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 664 I~d-----g~~G~lv-~--p~d~e~lA~aI~~~l~~l~-~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
+.+ ...|+.| + -.+.++.++.|.+++.... .+...+..+.+++.+ ..+..+|+.....|.+.|..-
T Consensus 508 ~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~-LS~~~dW~~~~~yY~~Ay~~A 582 (633)
T PF05693_consen 508 MQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAER-LSDLADWKNFGKYYEKAYDLA 582 (633)
T ss_dssp HHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHH-HGGGGBHHHHCHHHHHHHHHH
T ss_pred HHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHH
Confidence 432 3456544 2 3467788888877766644 455666666666654 458999999999999987754
No 96
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.59 E-value=3.7e-15 Score=140.28 Aligned_cols=130 Identities=23% Similarity=0.312 Sum_probs=96.3
Q ss_pred CcEEEEEecccCCCCHHHHHH-HHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCcc
Q 036539 532 KPIIFSMARLDVVKNLTGLTE-WYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQS 610 (749)
Q Consensus 532 k~vIl~vGRL~~~Kgl~~Lie-A~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 610 (749)
.++|+++|++.+.|+++.+++ ++.++.+..|+++|+|+|.+++ ++.++ ...+|+|+|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--------------~l~~~-----~~~~v~~~g--- 59 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD--------------ELKRL-----RRPNVRFHG--- 59 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS---------------HHCCH-----HHCTEEEE----
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH--------------HHHHh-----cCCCEEEcC---
Confidence 357999999999999999999 9999998889999999999765 23333 235899999
Q ss_pred CcCChHHHHHHHHccCcEEEECCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 611 DRLRNGELYRCIADTKGAFVQPAL-YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 611 ~~~~~~el~~~la~aadvfV~PS~-~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.+ +++..+++. +|+++.|+. .++++.+++|||++|+|||+++. +..+++.....|+++ ++|+++++++|.+++
T Consensus 60 -~~--~e~~~~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 60 -FV--EELPEILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp -S---HHHHHHHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred -CH--HHHHHHHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 55 489999995 999999986 67899999999999999999988 677777666678877 889999999997654
No 97
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.55 E-value=1.4e-12 Score=136.56 Aligned_cols=389 Identities=14% Similarity=0.124 Sum_probs=232.1
Q ss_pred HHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHH
Q 036539 280 LLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTM 359 (749)
Q Consensus 280 a~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~ 359 (749)
|..|++.|++|+ ++.-.-+. +.+.+-..++++|+.+|--+.... .++.-..+ +..|.. +...
T Consensus 33 A~Sla~~gf~Vd----liGy~~s~--------p~e~l~~hprI~ih~m~~l~~~~~----~p~~~~l~-lKvf~Q-fl~L 94 (444)
T KOG2941|consen 33 ALSLAKLGFQVD----LIGYVESI--------PLEELLNHPRIRIHGMPNLPFLQG----GPRVLFLP-LKVFWQ-FLSL 94 (444)
T ss_pred HHHHHHcCCeEE----EEEecCCC--------ChHHHhcCCceEEEeCCCCcccCC----CchhhhhH-HHHHHH-HHHH
Confidence 346899999999 65533111 233444455778887765443211 11111111 011111 1111
Q ss_pred HHHH-cCCCceEEEEcCCCc---hHHHHHHHHcCCCcEEEEecCCccc-ccCCCcchhhhcCcccccchhhhHHHHHhhh
Q 036539 360 ILEF-LGGKPDLIIGNYSDG---NLVASVMASKLGITQATIAHALEKT-KYEDSDVKWKELDPKYHFSCQFIADTIAMNA 434 (749)
Q Consensus 360 l~~~-l~~~pDIIh~h~~~~---~lva~lla~~~gvp~v~t~H~l~~~-k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~ 434 (749)
+.+. ..+.+|+|....+.+ -.++.+.+...|.+++...|++..+ ... ......... ..+....|...-+.
T Consensus 95 l~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~---~~~g~~h~l--V~l~~~~E~~fgk~ 169 (444)
T KOG2941|consen 95 LWALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLK---LKLGFQHPL--VRLVRWLEKYFGKL 169 (444)
T ss_pred HHHHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHH---hhcCCCCch--HHHHHHHHHHhhcc
Confidence 1111 146899999887765 4567777778899999999987543 100 000000110 11222345666678
Q ss_pred CCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhh
Q 036539 435 TDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELL 514 (749)
Q Consensus 435 aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l 514 (749)
||.-.|+|..+.+...+.+|--.....+..|-- ++.++-...=-..+-+-|...|...... .+..+.-.
T Consensus 170 a~~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps----~~~~l~~~H~lf~~l~~d~~~f~ar~~q-------~~~~~~ta 238 (444)
T KOG2941|consen 170 ADYNLCVTKAMREDLIQNWGINRAKVLYDRPPS----KPTPLDEQHELFMKLAGDHSPFRAREPQ-------DKALERTA 238 (444)
T ss_pred cccchhhHHHHHHHHHHhcCCceeEEEecCCCC----CCCchhHHHHHHhhhccccchhhhcccc-------cchhhhhh
Confidence 999999999888766666653222211111110 0000000000001111121112111000 01111112
Q ss_pred ccccch-hhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH-----c--cCCCeEEEEEeccCCCCCCcchhHHHH
Q 036539 515 YNKEDN-NEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK-----R--LRNLVNLVIVGAFFDPSKSKDREETAE 586 (749)
Q Consensus 515 ~~~~~~-~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~-----~--~~~~v~LvIVG~g~~~~~~~d~ee~~~ 586 (749)
|..-.. .... ..+....++++....++..++..|++|+.... + ..|..-.+|.|.||.
T Consensus 239 f~~k~~s~~v~--~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl------------ 304 (444)
T KOG2941|consen 239 FTKKDASGDVQ--LLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL------------ 304 (444)
T ss_pred Hhhhcccchhh--hccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch------------
Confidence 211111 0001 11233446777778999999999999998432 1 236677888888888
Q ss_pred HHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC---CCCCcHHHHHHHHcCCcEEEcCccccccc
Q 036539 587 IKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL---YEAFGLTVIEAMNCGLPTFATNQGGPAEI 663 (749)
Q Consensus 587 ~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~---~E~fGLtvlEAMa~GlPVVat~~GG~~Ei 663 (749)
.+++.+.++++++ .+|.+.- .+...++...+++ ++|..|+--. .=..|++++....||+||+|-+..-+.|+
T Consensus 305 kE~Y~~~I~~~~~-~~v~~~t---pWL~aEDYP~ll~-saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~EL 379 (444)
T KOG2941|consen 305 KEKYSQEIHEKNL-QHVQVCT---PWLEAEDYPKLLA-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDEL 379 (444)
T ss_pred hHHHHHHHHHhcc-cceeeee---cccccccchhHhh-ccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHH
Confidence 7788889999887 4566654 3777888899998 5998876432 23489999999999999999999999999
Q ss_pred cccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 664 IVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 664 I~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
|.|++||++|+ |.+++|+.+.-.+...-+|.+..+++.+++++. +.+.|+..-++...
T Consensus 380 Vkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~--~e~RW~~~W~~~~~ 437 (444)
T KOG2941|consen 380 VKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE--QELRWDESWERTAL 437 (444)
T ss_pred HhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH--HhhhHHHHHHHhhh
Confidence 99999999998 999999999888766667999999999999887 56777766555543
No 98
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.50 E-value=3.1e-12 Score=142.70 Aligned_cols=249 Identities=14% Similarity=0.090 Sum_probs=153.0
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 366 GKPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 366 ~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
.+||+|++....+ ++.....++.+|+|++..+. .+ -..|... ..+...+.+|.|+++++.
T Consensus 88 ~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P~-------~waw~~~-----------~~r~l~~~~d~v~~~~~~ 148 (385)
T TIGR00215 88 AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-PQ-------VWAWRKW-----------RAKKIEKATDFLLAILPF 148 (385)
T ss_pred cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-Cc-------HhhcCcc-----------hHHHHHHHHhHhhccCCC
Confidence 4899999887543 55555678889999874331 11 1122211 123456789999999876
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCC-CchHHhhhhccchhhHHhhccccchhhh
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFP-YTEKQRRLTKFHPEIEELLYNKEDNNEH 523 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p-~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 523 (749)
+.+- | . .+| .+..++.|++-...... ..... .++.
T Consensus 149 e~~~-------~------------~-~~g-----~~~~~vGnPv~~~~~~~~~~~~~-------------------~r~~ 184 (385)
T TIGR00215 149 EKAF-------Y------------Q-KKN-----VPCRFVGHPLLDAIPLYKPDRKS-------------------AREK 184 (385)
T ss_pred cHHH-------H------------H-hcC-----CCEEEECCchhhhccccCCCHHH-------------------HHHH
Confidence 6541 1 1 112 24556777663322110 11111 1244
Q ss_pred cCccCCCCCcEEEEEe--cccC-CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC
Q 036539 524 IGYLADRKKPIIFSMA--RLDV-VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600 (749)
Q Consensus 524 ~g~l~~~~k~vIl~vG--RL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 600 (749)
+|+ ++++++|+.+| |..+ .|++..+++++..+.+..|++++++++.... ..+.+.++.+.++..
T Consensus 185 lgl--~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-----------~~~~~~~~~~~~~~~ 251 (385)
T TIGR00215 185 LGI--DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-----------RRLQFEQIKAEYGPD 251 (385)
T ss_pred cCC--CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-----------hHHHHHHHHHHhCCC
Confidence 676 66778877663 7777 7899999999999987778888877654422 134455666666666
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc-----------------cccc
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG-----------------PAEI 663 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG-----------------~~Ei 663 (749)
.+|.+.+ . +...+|+ ++|++|++| |.+.+|||+||+|+|.+.-.. .+.+
T Consensus 252 ~~v~~~~----~----~~~~~l~-aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 252 LQLHLID----G----DARKAMF-AADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred CcEEEEC----c----hHHHHHH-hCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 6677664 1 4567888 599999999 888889999999999972111 2222
Q ss_pred cccCceEE-EE-CCCCHHHHHHHHHHHHHHhcCCH----HHHHHHHHHHHH
Q 036539 664 IVDGVSGF-HI-DPYNGDESSDKIADFFEACKVDP----TYWNKFSTEGLK 708 (749)
Q Consensus 664 I~dg~~G~-lv-~p~d~e~lA~aI~~~l~~l~~dp----~~~~~ms~~a~~ 708 (749)
+.+....- ++ +.-+++.+++.+.+ ++.|+ +.++++.+.-.+
T Consensus 318 l~~~~~~pel~q~~~~~~~l~~~~~~----ll~~~~~~~~~~~~~~~~~~~ 364 (385)
T TIGR00215 318 LANRLLVPELLQEECTPHPLAIALLL----LLENGLKAYKEMHRERQFFEE 364 (385)
T ss_pred hcCCccchhhcCCCCCHHHHHHHHHH----HhcCCcccHHHHHHHHHHHHH
Confidence 32221111 11 22357778877754 55888 888777655443
No 99
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.38 E-value=2.4e-12 Score=113.69 Aligned_cols=92 Identities=23% Similarity=0.404 Sum_probs=84.9
Q ss_pred EEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 036539 628 AFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGL 707 (749)
Q Consensus 628 vfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~ 707 (749)
+++.|+...+++..++|+||||+|||+++.++..+++.+|..++.++ |+++++++|. .+++||+.+++++++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~----~ll~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIE----YLLENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHH----HHHCCHHHHHHHHHHHH
Confidence 35678888999999999999999999999999999999999999998 9999999995 45589999999999999
Q ss_pred HHHHHhCCHHHHHHHHHH
Q 036539 708 KRINECYTWKIYANKMLN 725 (749)
Q Consensus 708 ~~v~~~ysw~~~a~~ll~ 725 (749)
+++.++|||+..++++++
T Consensus 75 ~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 75 ERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHhCCHHHHHHHHHC
Confidence 999999999999999863
No 100
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.32 E-value=1.8e-10 Score=131.01 Aligned_cols=321 Identities=15% Similarity=0.127 Sum_probs=178.9
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhh
Q 036539 356 ATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNA 434 (749)
Q Consensus 356 ~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~ 434 (749)
.+..+.... ..-|+|-.|+....+++.++.++. ..++.+..|.. +|.++.. +.+ -....-...|-.
T Consensus 131 FA~~i~~~~-~~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiP----FPs~e~f-r~l-------P~r~eiL~glL~ 197 (474)
T PF00982_consen 131 FADAIAEVY-RPGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIP----FPSSEIF-RCL-------PWREEILRGLLG 197 (474)
T ss_dssp HHHHHGGG---TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S--------HHHH-TTS-------TTHHHHHHHHTT
T ss_pred HHHHHHHhC-cCCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecC----CCCHHHH-hhC-------CcHHHHHHHhhc
Confidence 333444433 366899999999888888887765 57788899965 3333221 111 011112336788
Q ss_pred CCEEEeCCHHHHhhcCCCCCccccccccccccchhhhc-cCCCCC--CceEEecCCCCCCCCCCCchH---Hhhhhccch
Q 036539 435 TDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVK-GIDVLD--PKFNIAAPGADQSVYFPYTEK---QRRLTKFHP 508 (749)
Q Consensus 435 aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~-Gi~~~~--~ki~VIpnGvD~~~f~p~~~~---~~rl~~~~~ 508 (749)
||.|-..|+..+..+.......- +.-+.... ++.+.. .++.+.|-|||.+.+...... ..+...
T Consensus 198 aDlIgFqt~~~~~nFl~~~~r~l-------g~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~--- 267 (474)
T PF00982_consen 198 ADLIGFQTFEYARNFLSCCKRLL-------GLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEE--- 267 (474)
T ss_dssp SSEEEESSHHHHHHHHHHHHHHS--------EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHH---
T ss_pred CCEEEEecHHHHHHHHHHHHHHc-------CCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHH---
Confidence 99999999877663322211110 00000000 121112 257778999998876432111 111111
Q ss_pred hhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC----CeEEEEEeccCCCCCCcchhHH
Q 036539 509 EIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRN----LVNLVIVGAFFDPSKSKDREET 584 (749)
Q Consensus 509 ~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~ 584 (749)
.++.++ .+.++|+.+.|+|..||+..=+.||.++.+.+| ++.|+-++.... +...+..
T Consensus 268 -----------l~~~~~----~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr---~~~~~y~ 329 (474)
T PF00982_consen 268 -----------LREKFK----GKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSR---EDVPEYQ 329 (474)
T ss_dssp -----------HHHHTT----T-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-S---TTSHHHH
T ss_pred -----------HHHhcC----CCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccC---ccchhHH
Confidence 111121 224899999999999999999999999876555 577887776433 3334444
Q ss_pred HHHHHHHHHHHH----cCCCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCc----EEE
Q 036539 585 AEIKKMHALMEK----YQLKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP----TFA 654 (749)
Q Consensus 585 ~~~~~l~~li~~----~~L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlP----VVa 654 (749)
+..+++.+++.+ +|-.+ -|.++. ..++.+++..+|+ .||+++.+|..+|.-|+..|+.+|-.+ +|.
T Consensus 330 ~~~~~v~~~v~~IN~~~g~~~~~PI~~~~---~~~~~~~~~aly~-~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiL 405 (474)
T PF00982_consen 330 ELRREVEELVGRINGKYGTPDWTPIIYIY---RSLSFEELLALYR-AADVALVTSLRDGMNLVAKEYVACQDDNPGVLIL 405 (474)
T ss_dssp HHHHHHHHHHHHHHHHH-BTTB-SEEEE----S---HHHHHHHHH-H-SEEEE--SSBS--HHHHHHHHHS-TS--EEEE
T ss_pred HHHHHHHHHHHHHHhhcccCCceeEEEEe---cCCCHHHHHHHHH-hhhhEEecchhhccCCcceEEEEEecCCCCceEe
Confidence 455555555554 34322 255554 2678999999999 599999999999999999999999765 777
Q ss_pred cCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 655 TNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 655 t~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
|...|.++.+.+ ..++|+|.|.+++|++|.++++ -.++.++..-+.-++.+ ..+|-...++.+++-.
T Consensus 406 SefaGaa~~L~~--~al~VNP~d~~~~A~ai~~AL~---M~~~Er~~r~~~~~~~v-~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 406 SEFAGAAEQLSE--AALLVNPWDIEEVADAIHEALT---MPPEERKERHARLREYV-REHDVQWWAESFLRDL 472 (474)
T ss_dssp ETTBGGGGT-TT--S-EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHH-HHT-HHHHHHHHHHHH
T ss_pred eccCCHHHHcCC--ccEEECCCChHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-HhCCHHHHHHHHHHHh
Confidence 889999888855 3489999999999999987763 46666766667777777 7888888888887643
No 101
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.28 E-value=6.2e-10 Score=125.41 Aligned_cols=324 Identities=14% Similarity=0.090 Sum_probs=209.2
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHc-CCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASK-LGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~-~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..+..+....+ .-|+|-.|.....+++..+.++ ...++.+..|.. +|.+++.. .+.. ...-...|-
T Consensus 112 ~FA~~v~~~~~-~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiP----FPs~eifr-~LP~-------r~eil~glL 178 (474)
T PRK10117 112 LLADKLLPLLK-DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIP----FPTPEIFN-ALPP-------HDELLEQLC 178 (474)
T ss_pred HHHHHHHHhcC-CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCC----CCChHHHh-hCCC-------hHHHHHHHH
Confidence 33444444432 3489999999988888887765 346788888964 44443221 1110 011233678
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCC--CCceEEecCCCCCCCCCCCchHH--hhhhccchh
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVL--DPKFNIAAPGADQSVYFPYTEKQ--RRLTKFHPE 509 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~--~~ki~VIpnGvD~~~f~p~~~~~--~rl~~~~~~ 509 (749)
.+|.|=..|...+..+.+.+...-... ...+ ..+... ..++.+.|-|||.+.|....... .+..
T Consensus 179 ~aDlIGFqt~~y~rnFl~~~~~~lg~~--~~~~-----~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~----- 246 (474)
T PRK10117 179 DYDLLGFQTENDRLAFLDCLSNLTRVT--TRSG-----KSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLA----- 246 (474)
T ss_pred hCccceeCCHHHHHHHHHHHHHHcCCc--ccCC-----CeEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHH-----
Confidence 899998888877653332211110000 0000 001100 22577899999988774322211 1110
Q ss_pred hHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC----CeEEEEEeccCCCCCCcchhHHH
Q 036539 510 IEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRN----LVNLVIVGAFFDPSKSKDREETA 585 (749)
Q Consensus 510 ~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~ 585 (749)
..++.+ .++.+|+.+.|+|..||+..=++||.++.+.+| ++.|+-++.. ..+.-++..+
T Consensus 247 ---------~lr~~~-----~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p---sR~~v~~Y~~ 309 (474)
T PRK10117 247 ---------QLKAEL-----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT---SRGDVQAYQD 309 (474)
T ss_pred ---------HHHHHc-----CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC---CCCccHHHHH
Confidence 011122 356799999999999999999999999877665 4677777643 2233344444
Q ss_pred HHHHHHHHHHHcC-CCCcEEEec--CccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC-----cEEEcCc
Q 036539 586 EIKKMHALMEKYQ-LKGQMRWIA--AQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL-----PTFATNQ 657 (749)
Q Consensus 586 ~~~~l~~li~~~~-L~~~V~flG--~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~Gl-----PVVat~~ 657 (749)
...++.+++.+.+ -.+.+.|.+ +....++.+++..+|+ +|||++.++..+|+-|+..|+.+|-. +.|-|..
T Consensus 310 l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr-~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSef 388 (474)
T PRK10117 310 IRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFR-YSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQF 388 (474)
T ss_pred HHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHH-hccEEEecccccccccccchheeeecCCCCccEEEecc
Confidence 5555666655532 122222222 2224678999999999 59999999999999999999999965 3777999
Q ss_pred cccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 658 GGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 658 GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
.|.++.+. ..++++|.|.+++|++|.+++. -.++.+++--+..++.+ .++|....++.+++-..
T Consensus 389 AGaA~~L~---~AllVNP~d~~~~A~Ai~~AL~---Mp~~Er~~R~~~l~~~v-~~~dv~~W~~~fL~~L~ 452 (474)
T PRK10117 389 AGAANELT---SALIVNPYDRDEVAAALDRALT---MPLAERISRHAEMLDVI-VKNDINHWQECFISDLK 452 (474)
T ss_pred cchHHHhC---CCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-hhCCHHHHHHHHHHHHH
Confidence 99888884 3789999999999999987763 46666666666667777 78899998888887543
No 102
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.24 E-value=4.3e-11 Score=116.13 Aligned_cols=169 Identities=17% Similarity=0.157 Sum_probs=84.1
Q ss_pred CCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCccccc
Q 036539 259 PDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHR 338 (749)
Q Consensus 259 p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~ 338 (749)
+..||.+.|+. +|+++|+++||+|+ |++....+..... ........+....
T Consensus 9 ~~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~~-----------~~~~~~~~~~~~~------ 59 (177)
T PF13439_consen 9 PNIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEEE-----------LVKIFVKIPYPIR------ 59 (177)
T ss_dssp TSSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SST-----------EEEE---TT-SST------
T ss_pred CCCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchhh-----------ccceeeeeecccc------
Confidence 45799999999 77777899999999 8887644432110 0011111111110
Q ss_pred cccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcc
Q 036539 339 WVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPK 418 (749)
Q Consensus 339 ~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~ 418 (749)
....+.......+.+.+.+. +|||||+|.+.....+.+... ++|.+.+.|+...... .+......
T Consensus 60 -----~~~~~~~~~~~~~~~~i~~~---~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~~-----~~~~~~~~ 124 (177)
T PF13439_consen 60 -----KRFLRSFFFMRRLRRLIKKE---KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFERR-----FLKSKLSP 124 (177)
T ss_dssp -----SS--HHHHHHHHHHHHHHHH---T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--HH-----TTTTSCCC
T ss_pred -----cccchhHHHHHHHHHHHHHc---CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCccccc-----ccccccch
Confidence 00111122233344444443 899999998665444444333 9999999998742100 00000000
Q ss_pred cccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCC
Q 036539 419 YHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYF 494 (749)
Q Consensus 419 y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~ 494 (749)
+..... .......+.+|.+|++|...++.. .. .|++ ..|+.|||||||.+.|.
T Consensus 125 ~~~~~~-~~~~~~~~~~~~ii~vS~~~~~~l-------------------~~-~~~~--~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 125 YSYLNF-RIERKLYKKADRIIAVSESTKDEL-------------------IK-FGIP--PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHH-CTTHHHHCCSSEEEESSHHHHHHH-------------------HH-HT----SS-EEE----B-CCCH-
T ss_pred hhhhhh-hhhhhHHhcCCEEEEECHHHHHHH-------------------HH-hCCc--ccCCEEEECCccHHHcC
Confidence 000000 112234688999999999887721 11 3555 78999999999998873
No 103
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.22 E-value=2.4e-11 Score=115.85 Aligned_cols=160 Identities=18% Similarity=0.249 Sum_probs=84.6
Q ss_pred CcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCcccccccc
Q 036539 262 GGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVS 341 (749)
Q Consensus 262 GG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~is 341 (749)
||.+.|+. +|+++|.++||+|+ |+|+..++.. . + ....++.+.++|+.....
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------~-~--~~~~~~~~~~~~~~~~~~------- 52 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPED------D-E--EEEDGVRVHRLPLPRRPW------- 52 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GGG--------S--EEETTEEEEEE--S-SSS-------
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCcc------c-c--cccCCceEEeccCCccch-------
Confidence 79999999 77778899999999 9986643321 0 1 112357888888665321
Q ss_pred ccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCccccc
Q 036539 342 RFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHF 421 (749)
Q Consensus 342 r~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f 421 (749)
....+ .+...+.+.+ .....+||+||+|++..++++.++++..++|+|.+.|+..... ...|..
T Consensus 53 ~~~~~----~~~~~~~~~l-~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~----~~~~~~------- 116 (160)
T PF13579_consen 53 PLRLL----RFLRRLRRLL-AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRR----GSRWKR------- 116 (160)
T ss_dssp GGGHC----CHHHHHHHHC-HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HHH-------
T ss_pred hhhhH----HHHHHHHHHH-hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhh----ccchhh-------
Confidence 01111 1222222222 2236799999999976667777777678999999999753211 011111
Q ss_pred chhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCC
Q 036539 422 SCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPG 487 (749)
Q Consensus 422 ~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnG 487 (749)
......++..++.||.|+++|...++. . ...|++ ..|+.|||||
T Consensus 117 ~~~~~~~~~~~~~ad~vi~~S~~~~~~-------------------l-~~~g~~--~~ri~vipnG 160 (160)
T PF13579_consen 117 RLYRWLERRLLRRADRVIVVSEAMRRY-------------------L-RRYGVP--PDRIHVIPNG 160 (160)
T ss_dssp HHHHHHHHHHHHH-SEEEESSHHHHHH-------------------H-HHH-----GGGEEE----
T ss_pred HHHHHHHHHHHhcCCEEEECCHHHHHH-------------------H-HHhCCC--CCcEEEeCcC
Confidence 011133667899999999999988771 1 124555 7899999998
No 104
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.22 E-value=1.9e-08 Score=110.74 Aligned_cols=251 Identities=14% Similarity=0.129 Sum_probs=152.6
Q ss_pred CCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHH
Q 036539 366 GKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQE 445 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~ 445 (749)
.+||+|.+........+.++++.+|+|++..-.+.-. ... .++..+.|+.|.+.-..
T Consensus 90 ~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~------G~a----------------nk~~~~~a~~V~~~f~~- 146 (357)
T COG0707 90 LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVP------GLA----------------NKILSKFAKKVASAFPK- 146 (357)
T ss_pred cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCc------chh----------------HHHhHHhhceeeecccc-
Confidence 4999999988877778888889999998765444311 112 23345566666443321
Q ss_pred HhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcC
Q 036539 446 IAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIG 525 (749)
Q Consensus 446 ~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g 525 (749)
.. .+.+ +.++.++.|.+..+... ......+. .+
T Consensus 147 ~~------------------------~~~~--~~~~~~tG~Pvr~~~~~-~~~~~~~~--------------------~~ 179 (357)
T COG0707 147 LE------------------------AGVK--PENVVVTGIPVRPEFEE-LPAAEVRK--------------------DG 179 (357)
T ss_pred cc------------------------ccCC--CCceEEecCcccHHhhc-cchhhhhh--------------------hc
Confidence 11 1222 45677788877766554 22222111 11
Q ss_pred ccCCCCCcEEEEEec-ccCCCCHHHHH-HHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcE
Q 036539 526 YLADRKKPIIFSMAR-LDVVKNLTGLT-EWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM 603 (749)
Q Consensus 526 ~l~~~~k~vIl~vGR-L~~~Kgl~~Li-eA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 603 (749)
..++++|+.+|- ....+ +..++ ++...+.+ +++++...+... .+++...-.+++. +
T Consensus 180 ---~~~~~~ilV~GGS~Ga~~-ln~~v~~~~~~l~~---~~~v~~~~G~~~------------~~~~~~~~~~~~~---~ 237 (357)
T COG0707 180 ---RLDKKTILVTGGSQGAKA-LNDLVPEALAKLAN---RIQVIHQTGKND------------LEELKSAYNELGV---V 237 (357)
T ss_pred ---cCCCcEEEEECCcchhHH-HHHHHHHHHHHhhh---CeEEEEEcCcch------------HHHHHHHHhhcCc---E
Confidence 126777777764 43333 43333 33334433 567766665543 3455555555443 7
Q ss_pred EEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc--------ccccccCceEEEECC
Q 036539 604 RWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP--------AEIIVDGVSGFHIDP 675 (749)
Q Consensus 604 ~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~--------~EiI~dg~~G~lv~p 675 (749)
+..++.. ++.++|+ ++|++|+=+ =++|+.|..++|+|+|--..+.. +..+++...|..++-
T Consensus 238 ~v~~f~~------dm~~~~~-~ADLvIsRa----Ga~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~ 306 (357)
T COG0707 238 RVLPFID------DMAALLA-AADLVISRA----GALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQ 306 (357)
T ss_pred EEeeHHh------hHHHHHH-hccEEEeCC----cccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEecc
Confidence 7777533 6999999 499998865 36899999999999998644433 334455556777764
Q ss_pred CC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 036539 676 YN--GDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKML 724 (749)
Q Consensus 676 ~d--~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll 724 (749)
.+ ++.+++.|.+ +.++|+..++|++++++.. ..=.-+.+++.++
T Consensus 307 ~~lt~~~l~~~i~~----l~~~~~~l~~m~~~a~~~~-~p~aa~~i~~~~~ 352 (357)
T COG0707 307 SELTPEKLAELILR----LLSNPEKLKAMAENAKKLG-KPDAAERIADLLL 352 (357)
T ss_pred ccCCHHHHHHHHHH----HhcCHHHHHHHHHHHHhcC-CCCHHHHHHHHHH
Confidence 44 6677777754 5589999999999988764 2333333444433
No 105
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.22 E-value=6e-09 Score=114.98 Aligned_cols=248 Identities=15% Similarity=0.089 Sum_probs=139.7
Q ss_pred CCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 365 GGKPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
+.+||+||++....+..+.++++.+++|++. |.-.... -.+.++....+|.|+++-+.
T Consensus 89 ~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i--~e~n~~~--------------------g~~nr~~~~~a~~v~~~f~~ 146 (352)
T PRK12446 89 KLKPDVIFSKGGFVSVPVVIGGWLNRVPVLL--HESDMTP--------------------GLANKIALRFASKIFVTFEE 146 (352)
T ss_pred hcCCCEEEecCchhhHHHHHHHHHcCCCEEE--ECCCCCc--------------------cHHHHHHHHhhCEEEEEccc
Confidence 4599999998777777778899999999754 4221000 02245677888988664322
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
... +++ ..|+.++-|-|..+...+.... .++.+
T Consensus 147 ~~~-------------------------~~~--~~k~~~tG~Pvr~~~~~~~~~~--------------------~~~~~ 179 (352)
T PRK12446 147 AAK-------------------------HLP--KEKVIYTGSPVREEVLKGNREK--------------------GLAFL 179 (352)
T ss_pred hhh-------------------------hCC--CCCeEEECCcCCcccccccchH--------------------HHHhc
Confidence 111 122 3566677676655443221111 11335
Q ss_pred CccCCCCCcEEEEEecccCCCCHHH-HHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcE
Q 036539 525 GYLADRKKPIIFSMARLDVVKNLTG-LTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM 603 (749)
Q Consensus 525 g~l~~~~k~vIl~vGRL~~~Kgl~~-LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 603 (749)
|+ ++++++|+.+|-=--.+.+.. +.+++..+. .+++++++-+..+ .++. ...+ .++
T Consensus 180 ~l--~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~~~vv~~~G~~~------------~~~~---~~~~---~~~ 236 (352)
T PRK12446 180 GF--SRKKPVITIMGGSLGAKKINETVREALPELL---LKYQIVHLCGKGN------------LDDS---LQNK---EGY 236 (352)
T ss_pred CC--CCCCcEEEEECCccchHHHHHHHHHHHHhhc---cCcEEEEEeCCch------------HHHH---Hhhc---CCc
Confidence 55 566777777754322344533 334454443 2466666544322 1111 1111 133
Q ss_pred EEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc-----c----cccccccCceEEEEC
Q 036539 604 RWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG-----G----PAEIIVDGVSGFHID 674 (749)
Q Consensus 604 ~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G-----G----~~EiI~dg~~G~lv~ 674 (749)
...++. .+++..+|+ +||++|.=+ -+.|+.|++++|+|.|.-... + ..+.+.+...|..+.
T Consensus 237 ~~~~f~-----~~~m~~~~~-~adlvIsr~----G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~ 306 (352)
T PRK12446 237 RQFEYV-----HGELPDILA-ITDFVISRA----GSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLY 306 (352)
T ss_pred EEecch-----hhhHHHHHH-hCCEEEECC----ChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcc
Confidence 344532 246888898 599988764 478999999999999987432 1 223444445666664
Q ss_pred CC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 036539 675 PY--NGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNM 726 (749)
Q Consensus 675 p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 726 (749)
.. +++.+++++. .+++|++.+++ + .+++.....++++.++
T Consensus 307 ~~~~~~~~l~~~l~----~ll~~~~~~~~---~-----~~~~~~~~aa~~i~~~ 348 (352)
T PRK12446 307 EEDVTVNSLIKHVE----ELSHNNEKYKT---A-----LKKYNGKEAIQTIIDH 348 (352)
T ss_pred hhcCCHHHHHHHHH----HHHcCHHHHHH---H-----HHHcCCCCHHHHHHHH
Confidence 33 4567777774 45578766532 1 2345555666665554
No 106
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.17 E-value=4.4e-09 Score=118.13 Aligned_cols=329 Identities=16% Similarity=0.110 Sum_probs=206.7
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..+..+....+ .=|+|..|.....+++.++..+. ..++.+..|.. +|.+++.-- .-+...-.-.+-
T Consensus 136 ~FAd~i~~~~~-~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiP----fPssEvfr~--------lP~r~eIl~gll 202 (486)
T COG0380 136 KFADKIVEIYE-PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIP----FPSSEVFRC--------LPWREEILEGLL 202 (486)
T ss_pred HHHHHHHHhcC-CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCC----CCCHHHHhh--------CchHHHHHHHhh
Confidence 34444555443 23999999999888888887765 35678888865 333332210 001111223677
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhh-ccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHH
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVV-KGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEE 512 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~-~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~ 512 (749)
.||.|-..++..+..+...+.+... ++ +.-.+. .|.+-...++...|-|+|...|........... .+.+
T Consensus 203 ~~dligFqt~~y~~nF~~~~~r~~~---~~--~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~----~~~e 273 (486)
T COG0380 203 GADLIGFQTESYARNFLDLCSRLLG---VT--GDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQE----KVLE 273 (486)
T ss_pred cCCeeEecCHHHHHHHHHHHHHhcc---cc--ccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhh----HHHH
Confidence 8999998888776643332221110 00 000000 011101235667899999877653321111000 0000
Q ss_pred hhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC----CeEEEEEeccCCCCCCcchhHHHHHH
Q 036539 513 LLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRN----LVNLVIVGAFFDPSKSKDREETAEIK 588 (749)
Q Consensus 513 ~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~ 588 (749)
.++.+ ..++.+|+.+.|+|..||+..=+.||.++...+| ++.|+-++.... ..-++......
T Consensus 274 -------l~~~~----~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr---~~v~~y~~~~~ 339 (486)
T COG0380 274 -------LKAEL----GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSR---EDVEEYQALRL 339 (486)
T ss_pred -------HHHHh----cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCc---cccHHHHHHHH
Confidence 01111 2348899999999999999999999999987665 466777776644 22223233445
Q ss_pred HHHHHHHHc-CCCCcEEEec--CccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcC----CcEEEcCccccc
Q 036539 589 KMHALMEKY-QLKGQMRWIA--AQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCG----LPTFATNQGGPA 661 (749)
Q Consensus 589 ~l~~li~~~-~L~~~V~flG--~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~G----lPVVat~~GG~~ 661 (749)
++.+++.+. +..+++.|.+ +....++..++..+++ .+|+++..+.-+|+-++..|+.+|- -|.|-|...|.+
T Consensus 340 ~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~-~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa 418 (486)
T COG0380 340 QIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYR-AADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAA 418 (486)
T ss_pred HHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHh-hhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccch
Confidence 555555443 2233433322 1223578999999999 5999999999999999999999983 477888888888
Q ss_pred cccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 662 EIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 662 EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
..+.+ .++++|.|.+++|++|.+++. -.++.+++.-+.-++.+ .++|-...+..+++-.
T Consensus 419 ~~L~~---AliVNP~d~~~va~ai~~AL~---m~~eEr~~r~~~~~~~v-~~~d~~~W~~~fl~~l 477 (486)
T COG0380 419 SELRD---ALIVNPWDTKEVADAIKRALT---MSLEERKERHEKLLKQV-LTHDVARWANSFLDDL 477 (486)
T ss_pred hhhcc---CEeECCCChHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHH
Confidence 77754 789999999999999987663 46666666556666666 7788888888876643
No 107
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.14 E-value=4.9e-09 Score=126.83 Aligned_cols=325 Identities=11% Similarity=0.085 Sum_probs=207.4
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
..+..+.......-|+|-.|.....+++.++.++. ..++.+..|.. +|.++++.... ....-+..|-
T Consensus 189 ~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiP----FPs~eifr~LP--------~r~eiL~glL 256 (854)
T PLN02205 189 IFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSP----FPSSEIYKTLP--------IREELLRALL 256 (854)
T ss_pred HHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCC----CCChHHHhhCC--------cHHHHHHHHh
Confidence 34444444432223899999999888888887754 57888899965 44444321110 1112234788
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCC--CceEEecCCCCCCCCCCCch---HHhhhhccch
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLD--PKFNIAAPGADQSVYFPYTE---KQRRLTKFHP 508 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~--~ki~VIpnGvD~~~f~p~~~---~~~rl~~~~~ 508 (749)
.||.|=..|+..+..+.....+.-.. ..... +...|+.+.. -++.+.|-|||++.|..... ...+...
T Consensus 257 ~aDlIGFht~~yar~Fl~~~~r~lgl-~~~~~---~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~--- 329 (854)
T PLN02205 257 NSDLIGFHTFDYARHFLSCCSRMLGL-SYESK---RGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKE--- 329 (854)
T ss_pred cCCeEEecCHHHHHHHHHHHHHHhCC-cccCC---CcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHH---
Confidence 89999999987776433321111000 00000 0001222222 25778999999887743221 1111111
Q ss_pred hhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC----eEEEEEeccCCCCCCcchhHH
Q 036539 509 EIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNL----VNLVIVGAFFDPSKSKDREET 584 (749)
Q Consensus 509 ~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~ 584 (749)
.++.++ .+++.+|+.+.|+|..||+..=+.||.++.+.+|. +.|+-+..... +.-++..
T Consensus 330 -----------l~~~~~---~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr---~~~~~y~ 392 (854)
T PLN02205 330 -----------LIKQFC---DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPAR---GKGKDVK 392 (854)
T ss_pred -----------HHHHhc---cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC---cccHHHH
Confidence 112222 24678999999999999999999999999877765 46776665433 2223334
Q ss_pred HHHHHHHHHHHHc----CCCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC--------
Q 036539 585 AEIKKMHALMEKY----QLKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL-------- 650 (749)
Q Consensus 585 ~~~~~l~~li~~~----~L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~Gl-------- 650 (749)
+...++.+++.+. |-.+ -|.++- ..++..++..+|+ +|||++.++..+|+-|+..|+.+|..
T Consensus 393 ~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~---~~~~~~e~~aly~-~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~ 468 (854)
T PLN02205 393 EVQAETHSTVKRINETFGKPGYDPIVLID---APLKFYERVAYYV-VAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKL 468 (854)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCceEEEEe---cCCCHHHHHHHHH-hccEEEeccccccccccchheeEEccCccccccc
Confidence 4444555555543 3221 355554 3678999999999 59999999999999999999999854
Q ss_pred -----------cEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 036539 651 -----------PTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIY 719 (749)
Q Consensus 651 -----------PVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 719 (749)
..|.|...|.+..+. ..++|+|.|.+++|++|.+++. -.++.++.--+.-++++ .++|-...
T Consensus 469 ~~~~~~~~~~gvLiLSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v-~~~d~~~W 541 (854)
T PLN02205 469 LGLEPSTPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALE---MAEPEKQLRHEKHYRYV-STHDVGYW 541 (854)
T ss_pred cccccccCCCCceEeeeccchhHHhC---cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHH
Confidence 366788888777773 3689999999999999987763 45555555555666666 77888888
Q ss_pred HHHHHHH
Q 036539 720 ANKMLNM 726 (749)
Q Consensus 720 a~~ll~l 726 (749)
++.++.-
T Consensus 542 ~~~fl~~ 548 (854)
T PLN02205 542 ARSFLQD 548 (854)
T ss_pred HHHHHHH
Confidence 8877653
No 108
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.10 E-value=1.2e-08 Score=115.04 Aligned_cols=141 Identities=11% Similarity=0.105 Sum_probs=109.2
Q ss_pred cEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCc
Q 036539 533 PIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDR 612 (749)
Q Consensus 533 ~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~ 612 (749)
.-+++++. +..++++.++.+..|+++|.| |.+.+ ...+|.++ +++ ++.+.+.|+.
T Consensus 283 ~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te-----------~s~kL~~L-~~y--~nvvly~~~~--- 337 (438)
T TIGR02919 283 KQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE-----------MSSKLMSL-DKY--DNVKLYPNIT--- 337 (438)
T ss_pred ccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc-----------ccHHHHHH-Hhc--CCcEEECCcC---
Confidence 34666661 999999999999999999999 66544 12567777 666 4556666533
Q ss_pred CChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCHHHHHHHHHHHHHH
Q 036539 613 LRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ-GGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEA 691 (749)
Q Consensus 613 ~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~-GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~ 691 (749)
...+-.++.+ ||+++..|..|+|++++.|||+.|+|+|+.+. -|+.+++.+ |.+++.+|+++|+++|.+.
T Consensus 338 --~~~l~~ly~~-~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~l--- 408 (438)
T TIGR02919 338 --TQKIQELYQT-CDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDL--- 408 (438)
T ss_pred --hHHHHHHHHh-ccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHH---
Confidence 3357777775 99999999999999999999999999999754 467788866 8899999999999999665
Q ss_pred hcCCHHHHHHHHHHHHH
Q 036539 692 CKVDPTYWNKFSTEGLK 708 (749)
Q Consensus 692 l~~dp~~~~~ms~~a~~ 708 (749)
++||+.+++.-..-++
T Consensus 409 -L~d~~~~~~~~~~q~~ 424 (438)
T TIGR02919 409 -LNDPNQFRELLEQQRE 424 (438)
T ss_pred -hcCHHHHHHHHHHHHH
Confidence 4899877664433333
No 109
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.97 E-value=5.4e-08 Score=108.81 Aligned_cols=124 Identities=15% Similarity=0.094 Sum_probs=79.6
Q ss_pred CCCCcEEEEEecccC---CCCHHHHHHHHHHhHccCCCeEEE-EEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE
Q 036539 529 DRKKPIIFSMARLDV---VKNLTGLTEWYGKNKRLRNLVNLV-IVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR 604 (749)
Q Consensus 529 ~~~k~vIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~v~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 604 (749)
+.+++++++.|.... .+-...+++++..+ +.+++ .+|.... .. ..+.++|.
T Consensus 237 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~-------------~~-------~~~~~~v~ 291 (401)
T cd03784 237 AGRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGL-------------GA-------EDLPDNVR 291 (401)
T ss_pred CCCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccc-------------cc-------cCCCCceE
Confidence 345567788888754 23344555666543 34544 4444332 00 24567899
Q ss_pred EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CH
Q 036539 605 WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHIDPY--NG 678 (749)
Q Consensus 605 flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~p~--d~ 678 (749)
+.+ +++..++ +. .+|++|.-. | ..|+.||+++|+|+|.....+ .++.++....|..+++. ++
T Consensus 292 ~~~----~~p~~~l---l~-~~d~~I~hg---G-~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~ 359 (401)
T cd03784 292 VVD----FVPHDWL---LP-RCAAVVHHG---G-AGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTA 359 (401)
T ss_pred EeC----CCCHHHH---hh-hhheeeecC---C-chhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCH
Confidence 998 5666555 44 599999653 2 479999999999999986655 34455555678777665 57
Q ss_pred HHHHHHHHHHH
Q 036539 679 DESSDKIADFF 689 (749)
Q Consensus 679 e~lA~aI~~~l 689 (749)
+++++++.+.+
T Consensus 360 ~~l~~al~~~l 370 (401)
T cd03784 360 ERLAAALRRLL 370 (401)
T ss_pred HHHHHHHHHHh
Confidence 78888885543
No 110
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=98.97 E-value=2.1e-09 Score=112.69 Aligned_cols=183 Identities=16% Similarity=0.124 Sum_probs=101.5
Q ss_pred EEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCcc-CCcccccc-
Q 036539 240 NVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKC-NQELEPIE- 317 (749)
Q Consensus 240 rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~-~~~~e~i~- 317 (749)
||++||....|- -.+||...++. .|+++|+++||+|. |+++.+........ ...+....
T Consensus 1 kIl~vt~E~~P~-------~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAPF-------AKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTTT-------B-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCcc-------cccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 799999888652 37899999988 66777899999999 99988633211100 00000000
Q ss_pred ---C----------------ccceEEEEecCccCCcccccccccccccc--------chHHHH--HHHHHHHHHHcCCCc
Q 036539 318 ---G----------------TKHSNILRVPFKTDKGILHRWVSRFDVYP--------YLEGFA--QDATTMILEFLGGKP 368 (749)
Q Consensus 318 ---~----------------~~~~~I~rvp~~~~~~~~~~~isr~~i~p--------yl~~f~--~~~~~~l~~~l~~~p 368 (749)
+ ..++.++-+... .+.+|..++. ..++|+ ..++.++.+.+..+|
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~-------~~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~~p 134 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNP-------EYFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGWKP 134 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESH-------HHHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-S-
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecCh-------hhccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCCCC
Confidence 0 012333322211 1122333431 112322 233344444445699
Q ss_pred eEEEEcCCCchHHHHHHHHcC-------CCcEEEEecCCcccc-cCCC-----cchhhh--cCcccccchhhhHHHHHhh
Q 036539 369 DLIIGNYSDGNLVASVMASKL-------GITQATIAHALEKTK-YEDS-----DVKWKE--LDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 369 DIIh~h~~~~~lva~lla~~~-------gvp~v~t~H~l~~~k-~~~s-----~~~~~~--~~~~y~f~~~~~~e~~a~~ 433 (749)
||||+|.|.+++++.+++... ++|+|+|+|++.... ++.. .+.+.. ....+.+.......+.++.
T Consensus 135 DIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~ 214 (245)
T PF08323_consen 135 DIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIV 214 (245)
T ss_dssp SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHH
T ss_pred CEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHH
Confidence 999999999999999988865 599999999975432 1111 112211 1222333445555668899
Q ss_pred hCCEEEeCCHHHHhh
Q 036539 434 ATDFIIASTFQEIAG 448 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~ 448 (749)
.||.|+|+|+..+..
T Consensus 215 ~AD~v~TVS~~Ya~E 229 (245)
T PF08323_consen 215 YADKVTTVSPTYARE 229 (245)
T ss_dssp HSSEEEESSHHHHHH
T ss_pred hcCEeeeCCHHHHHH
Confidence 999999999988774
No 111
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.88 E-value=1.2e-06 Score=97.81 Aligned_cols=112 Identities=20% Similarity=0.229 Sum_probs=74.5
Q ss_pred CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEEC
Q 036539 599 LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHID 674 (749)
Q Consensus 599 L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~ 674 (749)
+.++|.+.+ +++..+ +++ .+|++|..+- . .|+.||+++|+|+|+....+ ..+.+.+...|..++
T Consensus 273 ~~~~v~~~~----~~p~~~---ll~-~~~~~I~hgG---~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQ----WVPQLE---ILK-KADAFITHGG---M-NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeC----CCCHHH---HHh-hCCEEEECCC---c-hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 457898888 555544 455 5999998753 2 48999999999999965443 234455556787776
Q ss_pred CC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 675 PY--NGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 675 p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
.. ++++++++|.+ ++.|+++++++.+- .+.+...-.-+..++.++++.
T Consensus 341 ~~~~~~~~l~~ai~~----~l~~~~~~~~~~~l-~~~~~~~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 341 PEEVTAEKLREAVLA----VLSDPRYAERLRKM-RAEIREAGGARRAADEIEGFL 390 (392)
T ss_pred cccCCHHHHHHHHHH----HhcCHHHHHHHHHH-HHHHHHcCCHHHHHHHHHHhh
Confidence 43 46778888854 45888877666443 333445556666776666543
No 112
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.85 E-value=8e-07 Score=99.73 Aligned_cols=166 Identities=15% Similarity=0.188 Sum_probs=105.5
Q ss_pred CCCcEEEEE-e-ccc-CCCCHHHHHHHHHHhHccCCCeEEEEEe-ccCCCCCCcchhHHHHHHHHHHHHHHcCCC-----
Q 036539 530 RKKPIIFSM-A-RLD-VVKNLTGLTEWYGKNKRLRNLVNLVIVG-AFFDPSKSKDREETAEIKKMHALMEKYQLK----- 600 (749)
Q Consensus 530 ~~k~vIl~v-G-RL~-~~Kgl~~LieA~~~l~~~~~~v~LvIVG-~g~~~~~~~d~ee~~~~~~l~~li~~~~L~----- 600 (749)
+++++|+.+ | |-. -.+++..+++++..+.+. +++.+++.- ++.. .+.+.+..++.+..
T Consensus 203 ~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~------------~~~~~~~l~~~g~~~~~~~ 269 (396)
T TIGR03492 203 TGRFRIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLS------------LEKLQAILEDLGWQLEGSS 269 (396)
T ss_pred CCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCC------------HHHHHHHHHhcCceecCCc
Confidence 344454444 4 322 367888999999999765 678877665 3433 34455555544442
Q ss_pred ---------CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc---cccccc--
Q 036539 601 ---------GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP---AEIIVD-- 666 (749)
Q Consensus 601 ---------~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~---~EiI~d-- 666 (749)
+++.+..+ ..+++.+|+ +||++|..| |.+..|++++|+|+|.....+. ..+.+.
T Consensus 270 ~~~~~~~~~~~~~v~~~------~~~~~~~l~-~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~ 337 (396)
T TIGR03492 270 EDQTSLFQKGTLEVLLG------RGAFAEILH-WADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQS 337 (396)
T ss_pred cccchhhccCceEEEec------hHhHHHHHH-hCCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhH
Confidence 12455442 346888998 599999996 5666999999999999864433 122222
Q ss_pred ---CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 667 ---GVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 667 ---g~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
+ .++.+...+++.+++++.+ +++|++.+++|.++++++..+...-+.+++.+.+
T Consensus 338 ~l~g-~~~~l~~~~~~~l~~~l~~----ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 338 RLLG-GSVFLASKNPEQAAQVVRQ----LLADPELLERCRRNGQERMGPPGASARIAESILK 394 (396)
T ss_pred hhcC-CEEecCCCCHHHHHHHHHH----HHcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 3 3445555678888888854 4589999988886665554344555555554443
No 113
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.82 E-value=7.1e-08 Score=96.08 Aligned_cols=177 Identities=21% Similarity=0.202 Sum_probs=114.8
Q ss_pred eeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCcccccc
Q 036539 238 LFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIE 317 (749)
Q Consensus 238 ~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~ 317 (749)
|.||+|+...|.|. .-||.|..+. +|+.+|+++||+|+ |.|+...... .. .
T Consensus 1 mkkIaIiGtrGIPa--------~YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~~~------~~---~ 51 (185)
T PF09314_consen 1 MKKIAIIGTRGIPA--------RYGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYYPY------KE---F 51 (185)
T ss_pred CceEEEEeCCCCCc--------ccCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCCCC------CC---c
Confidence 35899999999985 4699999999 88889999999999 9988632211 11 1
Q ss_pred CccceEEEEecCccCCccccccccccccccchHHHHHHHHH--HHH---HHcCCCceEEEEcCCC-chHHHHHHHH--cC
Q 036539 318 GTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATT--MIL---EFLGGKPDLIIGNYSD-GNLVASVMAS--KL 389 (749)
Q Consensus 318 ~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~--~l~---~~l~~~pDIIh~h~~~-~~lva~lla~--~~ 389 (749)
...+++++.+|.....+ +.++.-++.. ..+ +.-+.+.||||.+... ++.+..++.+ +.
T Consensus 52 ~y~gv~l~~i~~~~~g~--------------~~si~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~ 117 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKNGS--------------AESIIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKK 117 (185)
T ss_pred ccCCeEEEEeCCCCCCc--------------hHHHHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhc
Confidence 22368899998664321 1122112111 111 1112357899987766 5555555543 35
Q ss_pred CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchh
Q 036539 390 GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCR 469 (749)
Q Consensus 390 gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~ 469 (749)
|.|+++..|+++.. +.+|..+.+.|. ...|+++.+.||.+|+-|....+-..+.
T Consensus 118 g~~v~vN~DGlEWk-----R~KW~~~~k~~l----k~~E~~avk~ad~lIaDs~~I~~y~~~~----------------- 171 (185)
T PF09314_consen 118 GGKVVVNMDGLEWK-----RAKWGRPAKKYL----KFSEKLAVKYADRLIADSKGIQDYIKER----------------- 171 (185)
T ss_pred CCcEEECCCcchhh-----hhhcCHHHHHHH----HHHHHHHHHhCCEEEEcCHHHHHHHHHH-----------------
Confidence 77999999998642 335655544432 2468889999999999998776622111
Q ss_pred hhccCCCCCCceEEecCCCC
Q 036539 470 VVKGIDVLDPKFNIAAPGAD 489 (749)
Q Consensus 470 v~~Gi~~~~~ki~VIpnGvD 489 (749)
++ ..+..+||+|.|
T Consensus 172 --y~----~~~s~~IaYGad 185 (185)
T PF09314_consen 172 --YG----RKKSTFIAYGAD 185 (185)
T ss_pred --cC----CCCcEEecCCCC
Confidence 11 367889999987
No 114
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.71 E-value=3e-06 Score=94.17 Aligned_cols=268 Identities=17% Similarity=0.206 Sum_probs=149.5
Q ss_pred CCceEEEEcCC-CchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 366 GKPDLIIGNYS-DGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 366 ~~pDIIh~h~~-~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
.+||+|.++.. ...+.++++|..+++|+++..-++ .+. + ..+. ..-...-+.|+...+.+..
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~-rs~----~----~~eE--------~~r~~i~~la~l~f~~t~~ 154 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGE-VTE----G----AIDE--------SIRHAITKLSHLHFVATEE 154 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCc-cCC----C----CchH--------HHHHHHHHHHhhccCCCHH
Confidence 48999999874 457888999999999987543322 111 0 0011 0011233456777777766
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEe-cCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhh
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIA-APGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEH 523 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VI-pnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 523 (749)
..+. ...-|++ ..++.++ .+++|.-........ ....+.
T Consensus 155 ~~~~--------------------L~~eg~~--~~~i~~tG~~~iD~l~~~~~~~~------------------~~~~~~ 194 (365)
T TIGR03568 155 YRQR--------------------VIQMGED--PDRVFNVGSPGLDNILSLDLLSK------------------EELEEK 194 (365)
T ss_pred HHHH--------------------HHHcCCC--CCcEEEECCcHHHHHHhhhccCH------------------HHHHHH
Confidence 5441 1122444 5566666 445554322111111 112234
Q ss_pred cCccCCCCCcE-EEEEeccc--CCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC
Q 036539 524 IGYLADRKKPI-IFSMARLD--VVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600 (749)
Q Consensus 524 ~g~l~~~~k~v-Il~vGRL~--~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 600 (749)
+|+ +.++++ ++.+-|-. .....+.+.+.+..+.+...++ +++....++ .+....+.+.++... .
T Consensus 195 lgl--~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~--~vi~P~~~p------~~~~i~~~i~~~~~~---~ 261 (365)
T TIGR03568 195 LGI--DLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNY--IFTYPNADA------GSRIINEAIEEYVNE---H 261 (365)
T ss_pred hCC--CCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCC--EEEEeCCCC------CchHHHHHHHHHhcC---C
Confidence 565 333344 44554433 3333344444444443332234 444322110 011112233333211 3
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHH
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDE 680 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~ 680 (749)
++|.+++ .++..++..+++. |+++|.-|. | .+.||.++|+|||+ .|.-.|.+..|.+++++ +.|+++
T Consensus 262 ~~v~l~~----~l~~~~~l~Ll~~-a~~vitdSS----g-gi~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-g~~~~~ 328 (365)
T TIGR03568 262 PNFRLFK----SLGQERYLSLLKN-ADAVIGNSS----S-GIIEAPSFGVPTIN--IGTRQKGRLRADSVIDV-DPDKEE 328 (365)
T ss_pred CCEEEEC----CCChHHHHHHHHh-CCEEEEcCh----h-HHHhhhhcCCCEEe--ecCCchhhhhcCeEEEe-CCCHHH
Confidence 6799999 8889999999995 999886541 2 34899999999995 45688888888888878 568999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 036539 681 SSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNM 726 (749)
Q Consensus 681 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 726 (749)
+.+++.++ .+++.++.+ ......|.....++++.++
T Consensus 329 I~~a~~~~-----~~~~~~~~~-----~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 329 IVKAIEKL-----LDPAFKKSL-----KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred HHHHHHHH-----hChHHHHHH-----hhCCCCCCCChHHHHHHHh
Confidence 98888652 244433332 2223457677777776653
No 115
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.70 E-value=1.2e-06 Score=94.63 Aligned_cols=116 Identities=13% Similarity=0.142 Sum_probs=79.9
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCc
Q 036539 530 RKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQ 609 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~ 609 (749)
+.+.+++++|..+.. .++++++.+ ++..++++|.... + ...++|++.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~--------------~--------~~~~ni~~~~~~ 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAA--------------D--------PRPGNIHVRPFS 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCcc--------------c--------ccCCCEEEeecC
Confidence 345688999987665 666776664 4678988876632 0 015789988633
Q ss_pred cCcCChHHHHHHHHccCcEEEECCCCCCCcH-HHHHHHHcCCcEEEcCcccccc------ccccCceEEEECCC--CHHH
Q 036539 610 SDRLRNGELYRCIADTKGAFVQPALYEAFGL-TVIEAMNCGLPTFATNQGGPAE------IIVDGVSGFHIDPY--NGDE 680 (749)
Q Consensus 610 ~~~~~~~el~~~la~aadvfV~PS~~E~fGL-tvlEAMa~GlPVVat~~GG~~E------iI~dg~~G~lv~p~--d~e~ 680 (749)
..++.++|+. ||++|.-+ |. |+.||+++|+|++.-...+..| .++....|..+++. +++.
T Consensus 241 -----~~~~~~~m~~-ad~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~ 309 (318)
T PF13528_consen 241 -----TPDFAELMAA-ADLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPER 309 (318)
T ss_pred -----hHHHHHHHHh-CCEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHH
Confidence 3588999995 99999874 54 4999999999999977655433 33444566666543 4677
Q ss_pred HHHHHH
Q 036539 681 SSDKIA 686 (749)
Q Consensus 681 lA~aI~ 686 (749)
+++.|.
T Consensus 310 l~~~l~ 315 (318)
T PF13528_consen 310 LAEFLE 315 (318)
T ss_pred HHHHHh
Confidence 777663
No 116
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.66 E-value=1.5e-05 Score=87.64 Aligned_cols=170 Identities=15% Similarity=0.125 Sum_probs=121.6
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCC----------
Q 036539 532 KPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKG---------- 601 (749)
Q Consensus 532 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~---------- 601 (749)
+++++..+. ...--+.+++++..+++++|++.+++|=-.++ -.+.+.+++++.|+.-
T Consensus 231 r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHpE-----------Rf~~v~~l~~~~gl~~~~rS~~~~~~ 297 (419)
T COG1519 231 RPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHPE-----------RFKAVENLLKRKGLSVTRRSQGDPPF 297 (419)
T ss_pred CceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCChh-----------hHHHHHHHHHHcCCeEEeecCCCCCC
Confidence 778888876 33334558899999999999999999877665 3677888888887731
Q ss_pred --cEEEecCccCcCChHHHHHHHHccCcE-EEECCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccCceEEEEC
Q 036539 602 --QMRWIAAQSDRLRNGELYRCIADTKGA-FVQPALYEAFGLTVIEAMNCGLPTFATN----QGGPAEIIVDGVSGFHID 674 (749)
Q Consensus 602 --~V~flG~~~~~~~~~el~~~la~aadv-fV~PS~~E~fGLtvlEAMa~GlPVVat~----~GG~~EiI~dg~~G~lv~ 674 (749)
.=.++| ...+|+..+|. .+|+ ||-=|+.+-=|--++|+.++|+|||... ..-..+-+...+.|+.++
T Consensus 298 ~~tdV~l~-----DtmGEL~l~y~-~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~ 371 (419)
T COG1519 298 SDTDVLLG-----DTMGELGLLYG-IADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE 371 (419)
T ss_pred CCCcEEEE-----ecHhHHHHHHh-hccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC
Confidence 112333 24679999999 5877 5556776666788999999999999953 333344444555788887
Q ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 675 PYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 675 p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
|.+.+++++ +.+.+|++.+++|++++...+.++- ...+++++..+.
T Consensus 372 --~~~~l~~~v----~~l~~~~~~r~~~~~~~~~~v~~~~---gal~r~l~~l~~ 417 (419)
T COG1519 372 --DADLLAKAV----ELLLADEDKREAYGRAGLEFLAQNR---GALARTLEALKP 417 (419)
T ss_pred --CHHHHHHHH----HHhcCCHHHHHHHHHHHHHHHHHhh---HHHHHHHHHhhh
Confidence 566666666 5567889999999999999985542 255555555443
No 117
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.50 E-value=1.5e-06 Score=82.11 Aligned_cols=123 Identities=20% Similarity=0.228 Sum_probs=76.2
Q ss_pred HHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCccccccccccccccchHHHHHHHH
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDAT 357 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~ 357 (749)
.+++.|+++|++|+ ++|..... +......++.+.+++.... ...+++. +. .+.
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~~----------~~~~~~~~i~~~~~~~~~k-----------~~~~~~~-~~-~l~ 67 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRNDY----------EKYEIIEGIKVIRLPSPRK-----------SPLNYIK-YF-RLR 67 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCCc----------hhhhHhCCeEEEEecCCCC-----------ccHHHHH-HH-HHH
Confidence 66777899999999 88874221 1111123577777764321 1333432 21 333
Q ss_pred HHHHHHcCCCceEEEEcCCCc-hHHHHHHHHcCC-CcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhC
Q 036539 358 TMILEFLGGKPDLIIGNYSDG-NLVASVMASKLG-ITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNAT 435 (749)
Q Consensus 358 ~~l~~~l~~~pDIIh~h~~~~-~lva~lla~~~g-vp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~a 435 (749)
+.+. +.+|||||+|...+ ++++.++++..+ +|++.+.|+..... .+. .. .+ .....+.+++.+
T Consensus 68 k~ik---~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~--~~~-~~-------~~--~~~~~~~~~k~~ 132 (139)
T PF13477_consen 68 KIIK---KEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYN--SSK-KK-------KL--KKFIIKFAFKRA 132 (139)
T ss_pred HHhc---cCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeec--CCc-hH-------HH--HHHHHHHHHHhC
Confidence 3333 34899999999886 788888888888 99999999863311 110 00 00 112345688999
Q ss_pred CEEEeCC
Q 036539 436 DFIIAST 442 (749)
Q Consensus 436 D~IIt~S 442 (749)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999865
No 118
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.34 E-value=3.7e-05 Score=84.78 Aligned_cols=271 Identities=16% Similarity=0.164 Sum_probs=142.4
Q ss_pred CceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHH
Q 036539 367 KPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQE 445 (749)
Q Consensus 367 ~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~ 445 (749)
+||+|..+.-.. .+.++++|..+++|++..--++..... .-...+... -...-+-||.-++.|...
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs~d~-----~~g~~de~~--------R~~i~~la~lhf~~t~~~ 133 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRSGDR-----TEGMPDEIN--------RHAIDKLAHLHFAPTEEA 133 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES-----S-T-----TSSTTHHHH--------HHHHHHH-SEEEESSHHH
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCcccc-----CCCCchhhh--------hhhhhhhhhhhccCCHHH
Confidence 899999887554 677889999999997655444321110 000011111 122445689999999877
Q ss_pred HhhcCCCCCccccccccccccchhhhccCCCCCCceEEecC-CCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 446 IAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAP-GADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 446 ~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpn-GvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
.+. ...-|++ +.++.++-| ++|.- ....... .+.. ...
T Consensus 134 ~~~--------------------L~~~G~~--~~rI~~vG~~~~D~l-----~~~~~~~---~~~~-----------~~~ 172 (346)
T PF02350_consen 134 RER--------------------LLQEGEP--PERIFVVGNPGIDAL-----LQNKEEI---EEKY-----------KNS 172 (346)
T ss_dssp HHH--------------------HHHTT----GGGEEE---HHHHHH-----HHHHHTT---CC-H-----------HHH
T ss_pred HHH--------------------HHhcCCC--CCeEEEEChHHHHHH-----HHhHHHH---hhhh-----------hhH
Confidence 651 2233665 678877744 23321 0000000 0000 001
Q ss_pred CccCCCCCc-EEEEEecccC---CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC
Q 036539 525 GYLADRKKP-IIFSMARLDV---VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600 (749)
Q Consensus 525 g~l~~~~k~-vIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 600 (749)
++.....++ ++++.=|.+. ......+.+++..+.+. +++.+++.....+ .....+.+...++
T Consensus 173 ~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~~~~~i~~~l~~~--- 238 (346)
T PF02350_consen 173 GILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------RGSDIIIEKLKKY--- 238 (346)
T ss_dssp HHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------HHHHHHHHHHTT----
T ss_pred HHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------hHHHHHHHHhccc---
Confidence 221123344 4455544443 34567888888888776 6788888887544 1234444445444
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHH-HHHHcCCcEEEc-CccccccccccCceEEEECCCCH
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVI-EAMNCGLPTFAT-NQGGPAEIIVDGVSGFHIDPYNG 678 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvl-EAMa~GlPVVat-~~GG~~EiI~dg~~G~lv~p~d~ 678 (749)
++++++. .++..++..+++. |+++|-=| | .+. ||..+|+|||.- +.|--.+-+..+.+-+ +. .|+
T Consensus 239 ~~v~~~~----~l~~~~~l~ll~~-a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v~-~~~ 305 (346)
T PF02350_consen 239 DNVRLIE----PLGYEEYLSLLKN-ADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-VG-TDP 305 (346)
T ss_dssp TTEEEE--------HHHHHHHHHH-ESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-ET-SSH
T ss_pred CCEEEEC----CCCHHHHHHHHhc-ceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-eC-CCH
Confidence 3899998 7889999999995 88887664 6 777 999999999998 4555566666665545 65 799
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
+++.++|.+++ .+++.+.++.. ...-|.-...++++.++.
T Consensus 306 ~~I~~ai~~~l----~~~~~~~~~~~-----~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 306 EAIIQAIEKAL----SDKDFYRKLKN-----RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp HHHHHHHHHHH----H-HHHHHHHHC-----S--TT-SS-HHHHHHHHH
T ss_pred HHHHHHHHHHH----hChHHHHhhcc-----CCCCCCCCcHHHHHHHhh
Confidence 99999996655 44444444321 123465556666666554
No 119
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.34 E-value=5.7e-05 Score=82.31 Aligned_cols=69 Identities=13% Similarity=0.102 Sum_probs=51.8
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccc------ccccCceEEEE
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAE------IIVDGVSGFHI 673 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~E------iI~dg~~G~lv 673 (749)
.+++.+.+ ..+ .++..+|+. ||++|.-+-+ .++.||+++|+|++.....+..| .+++...|..+
T Consensus 228 ~~~v~~~~----~~~-~~~~~~l~~-ad~vI~~~G~----~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 228 NENVEIRR----ITT-DNFKELIKN-AELVITHGGF----SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred CCCEEEEE----CCh-HHHHHHHHh-CCEEEECCCh----HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 46888887 333 578999994 9999998632 47999999999999987765433 35555678888
Q ss_pred CCCCH
Q 036539 674 DPYNG 678 (749)
Q Consensus 674 ~p~d~ 678 (749)
+..+.
T Consensus 298 ~~~~~ 302 (321)
T TIGR00661 298 EYKEL 302 (321)
T ss_pred ChhhH
Confidence 76666
No 120
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.32 E-value=6.9e-05 Score=80.18 Aligned_cols=97 Identities=12% Similarity=0.189 Sum_probs=70.4
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEE-EEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCcc
Q 036539 532 KPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNL-VIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQS 610 (749)
Q Consensus 532 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~L-vIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 610 (749)
+.+++++|..+..+....+++++.++. .++++ +|+|.+.. ..+++++.++.. +++++.++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~-----------~~~~l~~~~~~~---~~i~~~~~-- 231 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNP-----------NLDELKKFAKEY---PNIILFID-- 231 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCc-----------CHHHHHHHHHhC---CCEEEEeC--
Confidence 457899998888775667788887653 34444 35565533 135566666553 47888874
Q ss_pred CcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc
Q 036539 611 DRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ 657 (749)
Q Consensus 611 ~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~ 657 (749)
..++..+|+. +|++|.+ .|.|+.|++++|+|+|+-..
T Consensus 232 ----~~~m~~lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 232 ----VENMAELMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred ----HHHHHHHHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 3479999995 9999995 58999999999999998654
No 121
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.30 E-value=1.7e-05 Score=89.53 Aligned_cols=184 Identities=11% Similarity=0.046 Sum_probs=118.9
Q ss_pred chhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcC
Q 036539 519 DNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQ 598 (749)
Q Consensus 519 ~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~ 598 (749)
..|+.+|+ +.+..++++..++. |=-...++++.++.+.-|+.+|++...... ..+.+.+.+.+.|
T Consensus 274 ~~R~~~gL--p~d~vvF~~fn~~~--KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-----------~~~~l~~~~~~~G 338 (468)
T PF13844_consen 274 TTRAQYGL--PEDAVVFGSFNNLF--KISPETLDLWARILKAVPNSRLWLLRFPAS-----------GEARLRRRFAAHG 338 (468)
T ss_dssp EETGGGT----SSSEEEEE-S-GG--G--HHHHHHHHHHHHHSTTEEEEEEETSTT-----------HHHHHHHHHHHTT
T ss_pred cCHHHcCC--CCCceEEEecCccc--cCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-----------HHHHHHHHHHHcC
Confidence 45678999 77777777777664 556788888888888889999988875433 1356888888999
Q ss_pred CC-CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccccc-----c-cCceEE
Q 036539 599 LK-GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEII-----V-DGVSGF 671 (749)
Q Consensus 599 L~-~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI-----~-dg~~G~ 671 (749)
+. +++.|.+ ..+..+-.+.+.. +||++=|-. -+-|.|.+||+.+|+|||+-.-..+..=+ . =|-..+
T Consensus 339 v~~~Ri~f~~----~~~~~ehl~~~~~-~DI~LDT~p-~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~El 412 (468)
T PF13844_consen 339 VDPDRIIFSP----VAPREEHLRRYQL-ADICLDTFP-YNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPEL 412 (468)
T ss_dssp S-GGGEEEEE-------HHHHHHHGGG--SEEE--SS-S--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGG
T ss_pred CChhhEEEcC----CCCHHHHHHHhhh-CCEEeeCCC-CCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchh
Confidence 87 7899998 6667777777774 999998743 34478999999999999986422221111 1 121222
Q ss_pred EECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHH
Q 036539 672 HIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINEC--YTWKIYANKMLNMGCM 729 (749)
Q Consensus 672 lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~--ysw~~~a~~ll~ly~~ 729 (749)
+. .|.++..+.-. +|.+|++.+++++++-+++..+. |+-..+++.+++.|+.
T Consensus 413 IA--~s~~eYv~~Av----~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 413 IA--DSEEEYVEIAV----RLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp B---SSHHHHHHHHH----HHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred cC--CCHHHHHHHHH----HHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 22 36777766664 45589999999999988876544 8999999999998875
No 122
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.26 E-value=3.6e-06 Score=91.41 Aligned_cols=104 Identities=25% Similarity=0.340 Sum_probs=70.2
Q ss_pred HHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccc----cccccC-ceEEEE-C--CCCHHHHHHHHHHHHHH
Q 036539 620 RCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPA----EIIVDG-VSGFHI-D--PYNGDESSDKIADFFEA 691 (749)
Q Consensus 620 ~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~----EiI~dg-~~G~lv-~--p~d~e~lA~aI~~~l~~ 691 (749)
.+.. .|.+.|+||.||++|-|..|---+|+|-|+|+..|.. |.|++. .-|+.+ + -..+++-.+.+.+++..
T Consensus 496 eFVR-GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~ 574 (692)
T KOG3742|consen 496 EFVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYE 574 (692)
T ss_pred HHhc-cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHH
Confidence 3344 6999999999999999999999999999999988864 445443 246554 2 12455555556555544
Q ss_pred hcCCHHHHHHHHHH-HHHHHHHhCCHHHHHHHHHH
Q 036539 692 CKVDPTYWNKFSTE-GLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 692 l~~dp~~~~~ms~~-a~~~v~~~ysw~~~a~~ll~ 725 (749)
.. ...+|+++-++ --++...-.+|+.+...|.+
T Consensus 575 F~-~qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~ 608 (692)
T KOG3742|consen 575 FC-KQSRRQRIIQRNRTERLSDLLDWKYLGRYYRK 608 (692)
T ss_pred HH-HHHHHHHHHHhcchhhHHHHHhHHHHhHHHHH
Confidence 33 34455555443 34556666889887766654
No 123
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.23 E-value=0.00048 Score=79.84 Aligned_cols=139 Identities=14% Similarity=0.020 Sum_probs=88.7
Q ss_pred CcEEEEEecccCC-----CCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEe
Q 036539 532 KPIIFSMARLDVV-----KNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWI 606 (749)
Q Consensus 532 k~vIl~vGRL~~~-----Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 606 (749)
++++++.|..... +-+..+++|++++. .++++..++.. .. .+++++|.+.
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~viw~~~~~~------------~~--------~~~p~Nv~i~ 351 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNVLWKYDGEV------------EA--------INLPANVLTQ 351 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeEEEEECCCc------------Cc--------ccCCCceEEe
Confidence 4678888986432 23455666666543 46666555432 00 2357889988
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHHH
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHIDPY--NGDE 680 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~p~--d~e~ 680 (749)
+ +++..++... . .+++||.- -| ..++.||+.+|+|+|+-...+ .+..++..+.|..++.. +.++
T Consensus 352 ~----w~Pq~~lL~h-p-~v~~fItH---GG-~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~ 421 (507)
T PHA03392 352 K----WFPQRAVLKH-K-NVKAFVTQ---GG-VQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQ 421 (507)
T ss_pred c----CCCHHHHhcC-C-CCCEEEec---CC-cccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHH
Confidence 8 7777665531 2 37788875 22 348999999999999964433 45555555688888764 4566
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 036539 681 SSDKIADFFEACKVDPTYWNKFSTEGLKR 709 (749)
Q Consensus 681 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~ 709 (749)
+.++|. ++++||.+++...+-+...
T Consensus 422 l~~ai~----~vl~~~~y~~~a~~ls~~~ 446 (507)
T PHA03392 422 LVLAIV----DVIENPKYRKNLKELRHLI 446 (507)
T ss_pred HHHHHH----HHhCCHHHHHHHHHHHHHH
Confidence 777775 4558888877655544443
No 124
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.05 E-value=0.00043 Score=76.76 Aligned_cols=241 Identities=19% Similarity=0.211 Sum_probs=137.1
Q ss_pred CCCceEEEE-cCCCchHHHHHHHHcCCCc--EEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeC
Q 036539 365 GGKPDLIIG-NYSDGNLVASVMASKLGIT--QATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIAS 441 (749)
Q Consensus 365 ~~~pDIIh~-h~~~~~lva~lla~~~gvp--~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~ 441 (749)
..+||+++. -+++.|+-.+...++.|++ +++.+- .+-+.|+... -+..-+..|.+++.
T Consensus 80 ~~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~--------PqvWAWr~~R-----------~~~i~~~~D~ll~i 140 (373)
T PF02684_consen 80 EEKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS--------PQVWAWRPGR-----------AKKIKKYVDHLLVI 140 (373)
T ss_pred HcCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC--------CceeeeCccH-----------HHHHHHHHhheeEC
Confidence 459999885 5566687766677778877 543322 1223343211 11234567888888
Q ss_pred CHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCC-CCCCCCCCCchHHhhhhccchhhHHhhccccch
Q 036539 442 TFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPG-ADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDN 520 (749)
Q Consensus 442 S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnG-vD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 520 (749)
=+-|.+ -|+. +|+ +...|-|. +|.-. +...... .
T Consensus 141 fPFE~~-------~y~~-------------~g~-----~~~~VGHPl~d~~~--~~~~~~~------------------~ 175 (373)
T PF02684_consen 141 FPFEPE-------FYKK-------------HGV-----PVTYVGHPLLDEVK--PEPDRAE------------------A 175 (373)
T ss_pred CcccHH-------HHhc-------------cCC-----CeEEECCcchhhhc--cCCCHHH------------------H
Confidence 776665 2221 233 34445443 23211 1111110 0
Q ss_pred hhhcCccCCCCCcEE-EEEe-cccC-CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHc
Q 036539 521 NEHIGYLADRKKPII-FSMA-RLDV-VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKY 597 (749)
Q Consensus 521 ~~~~g~l~~~~k~vI-l~vG-RL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~ 597 (749)
++.+ + ++++++| +..| |-.+ .+.+..+++++.++.+.+|++++++...... ..+.+.+.....
T Consensus 176 ~~~~-l--~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~-----------~~~~i~~~~~~~ 241 (373)
T PF02684_consen 176 REKL-L--DPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV-----------HEELIEEILAEY 241 (373)
T ss_pred HHhc-C--CCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH-----------HHHHHHHHHHhh
Confidence 1223 3 5566655 4445 5555 4456889999999999999999998765433 122344555555
Q ss_pred CCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC-ccc----------------c
Q 036539 598 QLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN-QGG----------------P 660 (749)
Q Consensus 598 ~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~-~GG----------------~ 660 (749)
+..-.+... .++-+..|+ +||+.+..| |.+.+|++.+|+|.|..- .+. +
T Consensus 242 ~~~~~~~~~--------~~~~~~~m~-~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL 307 (373)
T PF02684_consen 242 PPDVSIVII--------EGESYDAMA-AADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISL 307 (373)
T ss_pred CCCCeEEEc--------CCchHHHHH-hCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeec
Confidence 443334333 236788888 499988886 999999999999999863 222 2
Q ss_pred ccccccCc--eEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHH
Q 036539 661 AEIIVDGV--SGFHIDPYNGDESSDKIADFFEACKVDPTYWNK 701 (749)
Q Consensus 661 ~EiI~dg~--~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ 701 (749)
+.++.+.. -=++-+.-+++.+++++.+ ++.|++.++.
T Consensus 308 ~Niia~~~v~PEliQ~~~~~~~i~~~~~~----ll~~~~~~~~ 346 (373)
T PF02684_consen 308 PNIIAGREVVPELIQEDATPENIAAELLE----LLENPEKRKK 346 (373)
T ss_pred hhhhcCCCcchhhhcccCCHHHHHHHHHH----HhcCHHHHHH
Confidence 22221110 0112233467888888854 4477766443
No 125
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=98.03 E-value=0.00043 Score=78.00 Aligned_cols=158 Identities=13% Similarity=0.081 Sum_probs=103.2
Q ss_pred CCCcEEEEEecccCCCCHHHHHH-HHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 530 RKKPIIFSMARLDVVKNLTGLTE-WYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~Lie-A~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
+.+++.++.|..... ..+++ ++..+... ++++++..++.. . ..-+++.++...+
T Consensus 236 d~~~vyvslGt~~~~---~~l~~~~~~a~~~l--~~~vi~~~~~~~------------------~-~~~~~p~n~~v~~- 290 (406)
T COG1819 236 DRPIVYVSLGTVGNA---VELLAIVLEALADL--DVRVIVSLGGAR------------------D-TLVNVPDNVIVAD- 290 (406)
T ss_pred CCCeEEEEcCCcccH---HHHHHHHHHHHhcC--CcEEEEeccccc------------------c-ccccCCCceEEec-
Confidence 344556777766544 33443 33333332 567777776622 0 1225678888888
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEEEEC--CCCHHHHH
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEIIVDGVSGFHID--PYNGDESS 682 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G----G~~EiI~dg~~G~lv~--p~d~e~lA 682 (749)
+++..++.. .+|++|+.. |+| ++.||+.+|+|+|+-..+ ..++.+++-..|..++ .-+.+.++
T Consensus 291 ---~~p~~~~l~----~ad~vI~hG---G~g-tt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~ 359 (406)
T COG1819 291 ---YVPQLELLP----RADAVIHHG---GAG-TTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLR 359 (406)
T ss_pred ---CCCHHHHhh----hcCEEEecC---Ccc-hHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHH
Confidence 666666555 699999983 444 899999999999996444 3566677777898887 57888999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 683 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
++|.++ ++|+..++...+... -..+.-.-+.+++.++++.+
T Consensus 360 ~av~~v----L~~~~~~~~~~~~~~-~~~~~~g~~~~a~~le~~~~ 400 (406)
T COG1819 360 AAVNEV----LADDSYRRAAERLAE-EFKEEDGPAKAADLLEEFAR 400 (406)
T ss_pred HHHHHH----hcCHHHHHHHHHHHH-HhhhcccHHHHHHHHHHHHh
Confidence 999654 488877766544443 34455665666666666543
No 126
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.93 E-value=0.00063 Score=74.36 Aligned_cols=200 Identities=20% Similarity=0.173 Sum_probs=117.1
Q ss_pred CCCceEEEEcC-CCchHHHHHHHHcCC--CcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeC
Q 036539 365 GGKPDLIIGNY-SDGNLVASVMASKLG--ITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIAS 441 (749)
Q Consensus 365 ~~~pDIIh~h~-~~~~lva~lla~~~g--vp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~ 441 (749)
..+||++++-+ ++.|+-....-++.| +|+++.+- .|-+.|+.-. -....+..|.+.+.
T Consensus 83 ~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~--------PsVWAWr~~R-----------a~~i~~~~D~lLai 143 (381)
T COG0763 83 ANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS--------PSVWAWRPKR-----------AVKIAKYVDHLLAI 143 (381)
T ss_pred hcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC--------cceeeechhh-----------HHHHHHHhhHeeee
Confidence 56999998655 556654444445555 77664433 2334454321 12245778999998
Q ss_pred CHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecC-CCCCCCCCCCchHHhhhhccchhhHHhhccccch
Q 036539 442 TFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAP-GADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDN 520 (749)
Q Consensus 442 S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpn-GvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 520 (749)
=+-+.+ +|. ..|++ ...|-+ =+|.-.+.+... ..
T Consensus 144 lPFE~~-------------------~y~-k~g~~-----~~yVGHpl~d~i~~~~~r~--------------------~a 178 (381)
T COG0763 144 LPFEPA-------------------FYD-KFGLP-----CTYVGHPLADEIPLLPDRE--------------------AA 178 (381)
T ss_pred cCCCHH-------------------HHH-hcCCC-----eEEeCChhhhhccccccHH--------------------HH
Confidence 876655 121 11221 233333 233222223222 22
Q ss_pred hhhcCccCCCCCcE-EEEEe-cccC-CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHc
Q 036539 521 NEHIGYLADRKKPI-IFSMA-RLDV-VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKY 597 (749)
Q Consensus 521 ~~~~g~l~~~~k~v-Il~vG-RL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~ 597 (749)
++.+|+ +.++++ .+..| |-.+ .+....+++++.+++.+.|+.++++--.... .+.+.....+.
T Consensus 179 r~~l~~--~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~------------~~~~~~~~~~~ 244 (381)
T COG0763 179 REKLGI--DADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK------------YRRIIEEALKW 244 (381)
T ss_pred HHHhCC--CCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH------------HHHHHHHHhhc
Confidence 356777 555555 44455 4444 5577888999999998999999988766543 22333322222
Q ss_pred C-CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC
Q 036539 598 Q-LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN 656 (749)
Q Consensus 598 ~-L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~ 656 (749)
. ..-.+... .++-+..++ +||+.+..| |.+.+|+|.+|+|+|.+-
T Consensus 245 ~~~~~~~~~~--------~~~~~~a~~-~aD~al~aS-----GT~tLE~aL~g~P~Vv~Y 290 (381)
T COG0763 245 EVAGLSLILI--------DGEKRKAFA-AADAALAAS-----GTATLEAALAGTPMVVAY 290 (381)
T ss_pred cccCceEEec--------CchHHHHHH-HhhHHHHhc-----cHHHHHHHHhCCCEEEEE
Confidence 2 11222222 346677787 499887775 999999999999999973
No 127
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=97.84 E-value=0.0025 Score=69.79 Aligned_cols=61 Identities=15% Similarity=0.191 Sum_probs=43.8
Q ss_pred HHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc---ccccccccCceEEEECCCCHHHHHHHHHH
Q 036539 619 YRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG---GPAEIIVDGVSGFHIDPYNGDESSDKIAD 687 (749)
Q Consensus 619 ~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G---G~~EiI~dg~~G~lv~p~d~e~lA~aI~~ 687 (749)
..+++ -||++|-- -|....||...|+|+|.+-.| +.-+.+.+ .|.++...|++++.+.+.+
T Consensus 243 ~~Ll~-~a~l~Ig~-----ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gll~~~~~~~ei~~~v~~ 306 (335)
T PF04007_consen 243 LDLLY-YADLVIGG-----GGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGLLYHSTDPDEIVEYVRK 306 (335)
T ss_pred HHHHH-hcCEEEeC-----CcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCCeEecCCHHHHHHHHHH
Confidence 35666 38898865 377789999999999987543 23233333 4778888899998886644
No 128
>PLN02448 UDP-glycosyltransferase family protein
Probab=97.71 E-value=0.028 Score=64.48 Aligned_cols=140 Identities=10% Similarity=0.093 Sum_probs=76.6
Q ss_pred CCcEEEEEecccC--CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 531 KKPIIFSMARLDV--VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 531 ~k~vIl~vGRL~~--~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
...+.++.|.... .+-+..++++++.. +..++++..+.. ..+.+.. .+++...+
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~~-----~~~~lw~~~~~~-------------~~~~~~~-----~~~~~v~~- 329 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRDS-----GVRFLWVARGEA-------------SRLKEIC-----GDMGLVVP- 329 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCch-------------hhHhHhc-----cCCEEEec-
Confidence 4567788887643 12244444444442 457776654321 1121111 24566666
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccC-ceEEEECC-------C
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDG-VSGFHIDP-------Y 676 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg-~~G~lv~p-------~ 676 (749)
+++..++... . +.++||.-. | -.+++||+++|+|+|+-...+ ....+.+. +.|+-+.. -
T Consensus 330 ---w~pQ~~iL~h-~-~v~~fvtHg---G-~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~ 400 (459)
T PLN02448 330 ---WCDQLKVLCH-S-SVGGFWTHC---G-WNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLV 400 (459)
T ss_pred ---cCCHHHHhcc-C-ccceEEecC---c-hhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcC
Confidence 7777777662 1 133465541 2 348999999999999964443 44445442 45666632 2
Q ss_pred CHHHHHHHHHHHHHHhcCCH-HHHHHHHHHHH
Q 036539 677 NGDESSDKIADFFEACKVDP-TYWNKFSTEGL 707 (749)
Q Consensus 677 d~e~lA~aI~~~l~~l~~dp-~~~~~ms~~a~ 707 (749)
+.+++++++.+++ .++ +..++|.+++.
T Consensus 401 ~~~~l~~av~~vl----~~~~~~~~~~r~~a~ 428 (459)
T PLN02448 401 GREEIAELVKRFM----DLESEEGKEMRRRAK 428 (459)
T ss_pred cHHHHHHHHHHHh----cCCchhHHHHHHHHH
Confidence 5677888876544 553 33344444443
No 129
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.61 E-value=0.0017 Score=73.84 Aligned_cols=181 Identities=13% Similarity=0.150 Sum_probs=122.5
Q ss_pred hhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC
Q 036539 521 NEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK 600 (749)
Q Consensus 521 ~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~ 600 (749)
|+..|+ +++..++++.++. .|-...+++.+.++.+.-|+-.|++.|+|++ .+....+++++++.|+.
T Consensus 421 R~~lgl--p~~avVf~c~~n~--~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~---------~~~~~~l~~la~~~Gv~ 487 (620)
T COG3914 421 RAQLGL--PEDAVVFCCFNNY--FKITPEVFALWMQILSAVPNSVLLLKAGGDD---------AEINARLRDLAEREGVD 487 (620)
T ss_pred hhhcCC--CCCeEEEEecCCc--ccCCHHHHHHHHHHHHhCCCcEEEEecCCCc---------HHHHHHHHHHHHHcCCC
Confidence 356888 6777666666654 4544455555555555678999999999865 13467899999999986
Q ss_pred -CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc-------Cccccccccc-cCceEE
Q 036539 601 -GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT-------NQGGPAEIIV-DGVSGF 671 (749)
Q Consensus 601 -~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat-------~~GG~~EiI~-dg~~G~ 671 (749)
.+++|++ +.++++....+. -+|+++=+-.|- -+.|.+||+.+|+||++- ..|+ .++. -|..-.
T Consensus 488 ~eRL~f~p----~~~~~~h~a~~~-iADlvLDTyPY~-g~TTa~daLwm~vPVlT~~G~~FasR~~~--si~~~agi~e~ 559 (620)
T COG3914 488 SERLRFLP----PAPNEDHRARYG-IADLVLDTYPYG-GHTTASDALWMGVPVLTRVGEQFASRNGA--SIATNAGIPEL 559 (620)
T ss_pred hhheeecC----CCCCHHHHHhhc-hhheeeecccCC-CccchHHHHHhcCceeeeccHHHHHhhhH--HHHHhcCCchh
Confidence 7899999 666777777777 599988664443 367999999999999873 2332 1221 122333
Q ss_pred EECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHH
Q 036539 672 HIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINE--CYTWKIYANKMLNMGC 728 (749)
Q Consensus 672 lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~--~ysw~~~a~~ll~ly~ 728 (749)
+.+ +.++..++-. .+-.|...+++.+..-.+.... -|+-+..++++.++|.
T Consensus 560 vA~--s~~dYV~~av----~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~ 612 (620)
T COG3914 560 VAD--SRADYVEKAV----AFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYW 612 (620)
T ss_pred hcC--CHHHHHHHHH----HhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHH
Confidence 333 4444443332 3457887888776665555434 4899999999999974
No 130
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.57 E-value=0.005 Score=67.09 Aligned_cols=117 Identities=12% Similarity=0.074 Sum_probs=90.7
Q ss_pred CcEEEecCccCcCCh-HHHHHHHHccCcEEEECCC---CCC---CcHHHHHHHHcCCcEEEcCccccccccccCceEEEE
Q 036539 601 GQMRWIAAQSDRLRN-GELYRCIADTKGAFVQPAL---YEA---FGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHI 673 (749)
Q Consensus 601 ~~V~flG~~~~~~~~-~el~~~la~aadvfV~PS~---~E~---fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv 673 (749)
+++..+| +... +.+...++. .++++.-++ -++ +.+-+.|+|+||.|.+++...+..-.+.+|+.=++.
T Consensus 237 ~~~~yIg----~~~~~~~v~~~~~~-~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~ 311 (373)
T COG4641 237 PNVQYIG----YYNPKDGVPNAFKR-DDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVY 311 (373)
T ss_pred chhhhhh----ccCccchhhhcccc-cceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEe
Confidence 4566666 3333 667777774 777665443 222 377899999999999999888888888888765555
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 674 DPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 674 ~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
. |..++.+++. .+...++.++++.+.|.+++...||.+.-+..+++...
T Consensus 312 ~--d~kdl~~~~~----yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~ 360 (373)
T COG4641 312 Q--DSKDLKEKLK----YLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIA 360 (373)
T ss_pred c--CHHHHHHHHH----HHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHH
Confidence 4 8999999994 56689999999999999999999999988877777554
No 131
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.51 E-value=0.008 Score=69.98 Aligned_cols=197 Identities=15% Similarity=0.102 Sum_probs=110.5
Q ss_pred CCCceEEEE-cCCCchHHHHHHHHcCCC--cEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeC
Q 036539 365 GGKPDLIIG-NYSDGNLVASVMASKLGI--TQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIAS 441 (749)
Q Consensus 365 ~~~pDIIh~-h~~~~~lva~lla~~~gv--p~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~ 441 (749)
..+||++++ -+++.|+-.+..+++.|+ |+++.+- .+-..|+.-. -+..-+..|.++|.
T Consensus 308 ~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVs--------PqVWAWR~~R-----------ikki~k~vD~ll~I 368 (608)
T PRK01021 308 KTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVC--------PSIWAWRPKR-----------KTILEKYLDLLLLI 368 (608)
T ss_pred hcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEEC--------ccceeeCcch-----------HHHHHHHhhhheec
Confidence 459999996 556668765566677785 8764332 1223343211 11234567888888
Q ss_pred CHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCC-CCCCCCCCCchHHhhhhccchhhHHhhccccch
Q 036539 442 TFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPG-ADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDN 520 (749)
Q Consensus 442 S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnG-vD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 520 (749)
=+-|.+ +|+ .+|++ ...|-|. +|.-...+... +.
T Consensus 369 fPFE~~-------------------~y~-~~gv~-----v~yVGHPL~d~i~~~~~~~--------------------~~ 403 (608)
T PRK01021 369 LPFEQN-------------------LFK-DSPLR-----TVYLGHPLVETISSFSPNL--------------------SW 403 (608)
T ss_pred CccCHH-------------------HHH-hcCCC-----eEEECCcHHhhcccCCCHH--------------------HH
Confidence 776665 222 23443 3444332 33311111111 11
Q ss_pred hhhcCccCCCCCcEE-EEEe-cccC-CCCHHHHHHHHH--HhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHH
Q 036539 521 NEHIGYLADRKKPII-FSMA-RLDV-VKNLTGLTEWYG--KNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALME 595 (749)
Q Consensus 521 ~~~~g~l~~~~k~vI-l~vG-RL~~-~Kgl~~LieA~~--~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~ 595 (749)
++++|+ ++++++| +..| |-.+ .+.+..+++++. .+.+ +.++++...... ..+.+.+.++
T Consensus 404 r~~lgl--~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~---~l~fvvp~a~~~-----------~~~~i~~~~~ 467 (608)
T PRK01021 404 KEQLHL--PSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLAS---THQLLVSSANPK-----------YDHLILEVLQ 467 (608)
T ss_pred HHHcCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhcc---CeEEEEecCchh-----------hHHHHHHHHh
Confidence 345676 5555655 4445 5555 557788888887 4433 577766432211 1234445444
Q ss_pred HcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 596 KYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 596 ~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
..+. -.+..+. .++-+.+++ +||+.+..| |.+.+|++.+|+|.|+.
T Consensus 468 ~~~~-~~~~ii~-------~~~~~~~m~-aaD~aLaaS-----GTaTLEaAL~g~PmVV~ 513 (608)
T PRK01021 468 QEGC-LHSHIVP-------SQFRYELMR-ECDCALAKC-----GTIVLETALNQTPTIVT 513 (608)
T ss_pred hcCC-CCeEEec-------CcchHHHHH-hcCeeeecC-----CHHHHHHHHhCCCEEEE
Confidence 3321 1234432 112367888 599999886 99999999999999985
No 132
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.49 E-value=0.07 Score=58.79 Aligned_cols=277 Identities=15% Similarity=0.168 Sum_probs=164.8
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCH
Q 036539 365 GGKPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTF 443 (749)
Q Consensus 365 ~~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~ 443 (749)
..+||+|..|.-.. .++++++|...++|+++.--++-. .+.+|-. . ..-.+.-.-||.-++.|.
T Consensus 90 ~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt-----~~~~~PE---E-------~NR~l~~~~S~~hfapte 154 (383)
T COG0381 90 EEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRT-----GDLYFPE---E-------INRRLTSHLSDLHFAPTE 154 (383)
T ss_pred hhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccccc-----CCCCCcH---H-------HHHHHHHHhhhhhcCChH
Confidence 34999999987554 677789999999999876555521 1111111 0 001123344666677776
Q ss_pred HHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhh
Q 036539 444 QEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEH 523 (749)
Q Consensus 444 ~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 523 (749)
...+ +...-|++ ..++.|+-|-+-.. ..- ...+... .......
T Consensus 155 ~ar~--------------------nLl~EG~~--~~~IfvtGnt~iDa-l~~---~~~~~~~-----------~~~~~~~ 197 (383)
T COG0381 155 IARK--------------------NLLREGVP--EKRIFVTGNTVIDA-LLN---TRDRVLE-----------DSKILAK 197 (383)
T ss_pred HHHH--------------------HHHHcCCC--ccceEEeCChHHHH-HHH---HHhhhcc-----------chhhHHh
Confidence 6554 22333665 66788887743110 000 0000000 0000001
Q ss_pred cCccCCCCC-cEEEEEecccCC-CCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHH-HHcCCC
Q 036539 524 IGYLADRKK-PIIFSMARLDVV-KNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALM-EKYQLK 600 (749)
Q Consensus 524 ~g~l~~~~k-~vIl~vGRL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li-~~~~L~ 600 (749)
+ +.+.++ -++++.-|-... +++..+++++.++.+.++++.++.--... ..+++.. ..++-.
T Consensus 198 ~--~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~--------------~~v~e~~~~~L~~~ 261 (383)
T COG0381 198 G--LDDKDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPR--------------PRVRELVLKRLKNV 261 (383)
T ss_pred h--hccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCC--------------hhhhHHHHHHhCCC
Confidence 0 113443 445555566543 99999999999999888776665544332 2333333 455555
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHH
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG-GPAEIIVDGVSGFHIDPYNGD 679 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G-G~~EiI~dg~~G~lv~p~d~e 679 (749)
.+|..+. ++...+...++.. |-+.+-= .|--.=||-..|+||++-+.+ .-+|-++.| +-.++. .|.+
T Consensus 262 ~~v~li~----pl~~~~f~~L~~~-a~~iltD-----SGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg-~~~~ 329 (383)
T COG0381 262 ERVKLID----PLGYLDFHNLMKN-AFLILTD-----SGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVG-TDEE 329 (383)
T ss_pred CcEEEeC----CcchHHHHHHHHh-ceEEEec-----CCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeC-ccHH
Confidence 6799987 7778888888885 5343333 366678999999999997444 356666544 455664 3667
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 680 ESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 680 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
.+.+++ ..++++++..++|+.. ...|.=...++++.++...|
T Consensus 330 ~i~~~~----~~ll~~~~~~~~m~~~-----~npYgdg~as~rIv~~l~~~ 371 (383)
T COG0381 330 NILDAA----TELLEDEEFYERMSNA-----KNPYGDGNASERIVEILLNY 371 (383)
T ss_pred HHHHHH----HHHhhChHHHHHHhcc-----cCCCcCcchHHHHHHHHHHH
Confidence 777777 4556898888887554 45676666777777766554
No 133
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.44 E-value=0.002 Score=77.04 Aligned_cols=150 Identities=17% Similarity=0.103 Sum_probs=106.2
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHH----HHHHHHHhHccC----CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHH
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTG----LTEWYGKNKRLR----NLVNLVIVGAFFDPSKSKDREETAEIKKMHALM 594 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~----LieA~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 594 (749)
..|+..+++...++++-|+..+|.... .++.+.++++.. ....+++.|...+ .+..-...++.+..++
T Consensus 521 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 596 (797)
T cd04300 521 TTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAP----GYYMAKLIIKLINAVA 596 (797)
T ss_pred HhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHH
Confidence 456666889999999999999999888 445566665431 1245555554433 2444444555566665
Q ss_pred HHc----CCCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 036539 595 EKY----QLKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD 666 (749)
Q Consensus 595 ~~~----~L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d 666 (749)
+.. .+.+ +|.|+. .... .+.+.+-.++||-.+-|. .|+.|..=+=+|.-|.++++|--|...|+.++
T Consensus 597 ~~in~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 671 (797)
T cd04300 597 DVVNNDPDVGDKLKVVFLP----NYNV-SLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEE 671 (797)
T ss_pred HHhccChhcCCceEEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHH
Confidence 532 2334 688886 3433 444555557999998887 89999999999999999999999999999987
Q ss_pred --CceEEEECCCCHHHHH
Q 036539 667 --GVSGFHIDPYNGDESS 682 (749)
Q Consensus 667 --g~~G~lv~p~d~e~lA 682 (749)
++|+|+|-. +.++..
T Consensus 672 vG~eN~fiFG~-~~~ev~ 688 (797)
T cd04300 672 VGEENIFIFGL-TAEEVE 688 (797)
T ss_pred hCcCcEEEeCC-CHHHHH
Confidence 789999954 444443
No 134
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=97.37 E-value=0.0037 Score=73.99 Aligned_cols=143 Identities=18% Similarity=0.143 Sum_probs=108.8
Q ss_pred cCccCCCCCcEEEEEecccCCCCHHHHH----HHHHHhH-ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcC
Q 036539 524 IGYLADRKKPIIFSMARLDVVKNLTGLT----EWYGKNK-RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQ 598 (749)
Q Consensus 524 ~g~l~~~~k~vIl~vGRL~~~Kgl~~Li----eA~~~l~-~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~ 598 (749)
.|+..+++...++++-|+..+|..+..+ ..+..++ ...|.+.+++.|...+ .|..-...++.+...++..+
T Consensus 479 ~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP----~y~~aK~iIk~I~~~a~~in 554 (750)
T COG0058 479 TGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHP----ADYAAKEIIKLINDVADVIN 554 (750)
T ss_pred cCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCC----cchHHHHHHHHHHHHHHhhc
Confidence 4555578899999999999999877765 3444444 3335555555555433 45566667777888888877
Q ss_pred CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc--cCceEEEEC
Q 036539 599 LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIV--DGVSGFHID 674 (749)
Q Consensus 599 L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~--dg~~G~lv~ 674 (749)
...+|.|+. ..+. .+.+.+-.++||-.+.|. .|+.|.+-+=||.-|.++|+|--|...|+.+ ++.|||.|-
T Consensus 555 ~~lkVvFl~----nYdv-slA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 555 NKLKVVFLP----NYDV-SLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred ccceEEEeC----CCCh-hHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 667899997 3333 455555557999998876 8999999999999999999999999999997 889999995
Q ss_pred C
Q 036539 675 P 675 (749)
Q Consensus 675 p 675 (749)
.
T Consensus 630 ~ 630 (750)
T COG0058 630 E 630 (750)
T ss_pred C
Confidence 4
No 135
>PLN02208 glycosyltransferase family protein
Probab=97.27 E-value=0.54 Score=53.75 Aligned_cols=93 Identities=11% Similarity=0.099 Sum_probs=54.9
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCc-HHHHHHHHcCCcEEEcCc----ccccccccc-CceEEEEC
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFG-LTVIEAMNCGLPTFATNQ----GGPAEIIVD-GVSGFHID 674 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fG-LtvlEAMa~GlPVVat~~----GG~~EiI~d-g~~G~lv~ 674 (749)
.++...+ +++..++...= +.++||.- +| ++++||+++|+|+|+-.. ......+.+ -+.|..++
T Consensus 311 ~g~~v~~----W~PQ~~iL~H~--~v~~FvtH-----cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~ 379 (442)
T PLN02208 311 RGVVWGG----WVQQPLILDHP--SIGCFVNH-----CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVS 379 (442)
T ss_pred CCcEeec----cCCHHHHhcCC--ccCeEEcc-----CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEec
Confidence 3455556 77776765521 12345432 33 489999999999999633 334444433 45777775
Q ss_pred C-----CCHHHHHHHHHHHHHHhcCCH-HHHHHHHHHHHH
Q 036539 675 P-----YNGDESSDKIADFFEACKVDP-TYWNKFSTEGLK 708 (749)
Q Consensus 675 p-----~d~e~lA~aI~~~l~~l~~dp-~~~~~ms~~a~~ 708 (749)
. -+.++++++|.+++ .++ +..+++.+++++
T Consensus 380 ~~~~~~~~~~~l~~ai~~~m----~~~~e~g~~~r~~~~~ 415 (442)
T PLN02208 380 REKTGWFSKESLSNAIKSVM----DKDSDLGKLVRSNHTK 415 (442)
T ss_pred cccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 4 25677888886544 554 344555555443
No 136
>PRK14986 glycogen phosphorylase; Provisional
Probab=97.16 E-value=0.0027 Score=75.98 Aligned_cols=151 Identities=15% Similarity=0.099 Sum_probs=109.0
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHH-HHHH---HHHhHccC----CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHH
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTG-LTEW---YGKNKRLR----NLVNLVIVGAFFDPSKSKDREETAEIKKMHALM 594 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~-LieA---~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 594 (749)
..|...+++...++++-|+..+|.... ++.. +.++++.. ....+++.|...+ .+..-...++.+..++
T Consensus 534 ~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIk~I~~va 609 (815)
T PRK14986 534 QLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAAS----AYYMAKHIIHLINDVA 609 (815)
T ss_pred HhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 447767888899999999999999888 5544 55555421 1356666665543 3455555666666666
Q ss_pred HH----cCCCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 036539 595 EK----YQLKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD 666 (749)
Q Consensus 595 ~~----~~L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d 666 (749)
+. -.+.+ +|.|+. ..+. .+.+.+-.++||-.+-|. .|+.|.+=+=||.-|.++++|--|...|+.++
T Consensus 610 ~~in~Dp~v~~~lkVVFle----nY~v-slAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~ 684 (815)
T PRK14986 610 KVINNDPQIGDKLKVVFIP----NYSV-SLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEH 684 (815)
T ss_pred HHhccChhhcCceeEEEeC----CCCH-HHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHh
Confidence 62 22334 788887 3444 445555557999998887 89999999999999999999999999999986
Q ss_pred --CceEEEECCCCHHHHHH
Q 036539 667 --GVSGFHIDPYNGDESSD 683 (749)
Q Consensus 667 --g~~G~lv~p~d~e~lA~ 683 (749)
++|||.|-. +.++.++
T Consensus 685 vG~eN~~~fG~-~~~ev~~ 702 (815)
T PRK14986 685 VGEENIFIFGN-TAEEVEA 702 (815)
T ss_pred cCCCcEEEeCC-CHHHHHH
Confidence 889999964 4555443
No 137
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=96.93 E-value=0.21 Score=53.63 Aligned_cols=168 Identities=8% Similarity=0.025 Sum_probs=112.2
Q ss_pred cEEEEEec-ccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC
Q 036539 533 PIIFSMAR-LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD 611 (749)
Q Consensus 533 ~vIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 611 (749)
++.+-+|+ =|+--+.-.+++++.+... .++++++.=+-+. ...+|++++.+..+++--.++++.+- +
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~--~~v~ii~PlsYp~-------gn~~Yi~~V~~~~~~lF~~~~~~~L~---e 213 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFG--DNVKIIVPMGYPA-------NNQAYIEEVRQAGLALFGAENFQILT---E 213 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhC--CCeEEEEECCcCC-------CCHHHHHHHHHHHHHhcCcccEEehh---h
Confidence 45555665 4667777777777776643 5788877766543 12467888988888886557888876 4
Q ss_pred cCChHHHHHHHHccCcEEEECC-CCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 612 RLRNGELYRCIADTKGAFVQPA-LYEAFGLTVIEAMNCGLPTFAT-NQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS-~~E~fGLtvlEAMa~GlPVVat-~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.++-+|..++++. +|+.++-- +.+|.| +++=.+..|+||+-+ ++.-..+..+.|.. ++++..+. -..+.+
T Consensus 214 ~l~f~eYl~lL~~-~Dl~~f~~~RQQgiG-nl~lLi~~G~~v~l~r~n~fwqdl~e~gv~-Vlf~~d~L---~~~~v~-- 285 (322)
T PRK02797 214 KLPFDDYLALLRQ-CDLGYFIFARQQGIG-TLCLLIQLGKPVVLSRDNPFWQDLTEQGLP-VLFTGDDL---DEDIVR-- 285 (322)
T ss_pred hCCHHHHHHHHHh-CCEEEEeechhhHHh-HHHHHHHCCCcEEEecCCchHHHHHhCCCe-EEecCCcc---cHHHHH--
Confidence 7889999999995 99988764 588999 555679999999997 55556666666543 33443322 111110
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 690 EACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 690 ~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+..+++...-++.+. |+-+.+.+.+.+++..
T Consensus 286 -------e~~rql~~~dk~~I~--Ff~pn~~~~W~~~l~~ 316 (322)
T PRK02797 286 -------EAQRQLASVDKNIIA--FFSPNYLQGWRNALAI 316 (322)
T ss_pred -------HHHHHHHhhCcceee--ecCHhHHHHHHHHHHH
Confidence 112334444445552 8888888888887754
No 138
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=96.83 E-value=0.0076 Score=59.60 Aligned_cols=110 Identities=18% Similarity=0.232 Sum_probs=60.0
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhh-----hcCcccccchhhhHH
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWK-----ELDPKYHFSCQFIAD 428 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~-----~~~~~y~f~~~~~~e 428 (749)
.++..+++. +..||||++|...|.. ..++..+ ++|++.-+--...... ++..+. ......+...+-...
T Consensus 55 ~a~~~L~~~-Gf~PDvI~~H~GWGe~--Lflkdv~P~a~li~Y~E~~y~~~g--~d~~FDpe~p~~~~~~~~~r~rN~~~ 129 (171)
T PF12000_consen 55 RAARQLRAQ-GFVPDVIIAHPGWGET--LFLKDVFPDAPLIGYFEFYYRASG--ADVGFDPEFPPSLDDRARLRMRNAHN 129 (171)
T ss_pred HHHHHHHHc-CCCCCEEEEcCCcchh--hhHHHhCCCCcEEEEEEEEecCCC--CcCCCCCCCCCCHHHHHHHHHHhHHH
Confidence 334444444 6789999999877632 3445555 6776642211100100 111110 011111112222345
Q ss_pred HHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCC
Q 036539 429 TIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVY 493 (749)
Q Consensus 429 ~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f 493 (749)
...+..||..|+.|.-.+. +| |. .+..||.||+-|||++.+
T Consensus 130 l~~l~~~D~~isPT~wQ~~-------~f--------P~---------~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 130 LLALEQADAGISPTRWQRS-------QF--------PA---------EFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHHhCCcCcCCCHHHHH-------hC--------CH---------HHHcCcEEeecccchhhc
Confidence 5678889999999965544 22 22 236799999999998765
No 139
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.79 E-value=1.6 Score=50.51 Aligned_cols=118 Identities=14% Similarity=0.107 Sum_probs=69.0
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccc-cCceEEEECC
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN----QGGPAEIIV-DGVSGFHIDP 675 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~----~GG~~EiI~-dg~~G~lv~p 675 (749)
.+++..+ +++..++... .+.++||.-. |+ .+++||+++|+|+|+-. ..-....+. .-+.|.-+..
T Consensus 343 ~g~~v~~----w~PQ~~vL~h--~~v~~fvtH~---G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~ 412 (477)
T PLN02863 343 RGLVIRG----WAPQVAILSH--RAVGAFLTHC---GW-NSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCE 412 (477)
T ss_pred CCEEecC----CCCHHHHhcC--CCcCeEEecC---Cc-hHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEecc
Confidence 4567767 7777665552 1256776552 22 48999999999999953 333444443 3357776632
Q ss_pred -----CCHHHHHHHHHHHHHHhcCCHHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhH
Q 036539 676 -----YNGDESSDKIADFFEACKVDPTYW---NKFSTEGLKRINECYTWKIYANKMLNMGCMYS 731 (749)
Q Consensus 676 -----~d~e~lA~aI~~~l~~l~~dp~~~---~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~~ 731 (749)
-+.+++++++.+.+. ++++.+ +++++.+++.+.+.=+-....+++.+.++.+|
T Consensus 413 ~~~~~~~~~~v~~~v~~~m~---~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~ 473 (477)
T PLN02863 413 GADTVPDSDELARVFMESVS---ENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELG 473 (477)
T ss_pred CCCCCcCHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhc
Confidence 256778888866542 344433 33444444444343445555667766666555
No 140
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=96.70 E-value=1.3 Score=50.34 Aligned_cols=133 Identities=15% Similarity=0.126 Sum_probs=70.2
Q ss_pred HHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCc
Q 036539 548 TGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKG 627 (749)
Q Consensus 548 ~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aad 627 (749)
..+.+++..+.+. +.+++++-.-.. .++..++. ....+++.+.+.-..+++.+. +.....++..+++. +|
T Consensus 260 ~~la~~i~~Li~~--g~~Vv~lp~~~~-~~~~~~dD---~~~~~~l~~~~~~~~~~~vi~---~~~~~~e~~~iIs~-~d 329 (426)
T PRK10017 260 KAFAGVVNRIIDE--GYQVIALSTCTG-IDSYNKDD---RMVALNLRQHVSDPARYHVVM---DELNDLEMGKILGA-CE 329 (426)
T ss_pred HHHHHHHHHHHHC--CCeEEEEecccC-ccCCCCch---HHHHHHHHHhcccccceeEec---CCCChHHHHHHHhh-CC
Confidence 3455666666543 455555543211 00101111 222334444444334445443 13445688899995 99
Q ss_pred EEEECCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccCceEEEECC--CCHHHHHHHHHHHHHHhcCCHHHHHH
Q 036539 628 AFVQPALYEAFGLTVIEAMNCGLPTFATNQ----GGPAEIIVDGVSGFHIDP--YNGDESSDKIADFFEACKVDPTYWNK 701 (749)
Q Consensus 628 vfV~PS~~E~fGLtvlEAMa~GlPVVat~~----GG~~EiI~dg~~G~lv~p--~d~e~lA~aI~~~l~~l~~dp~~~~~ 701 (749)
++|-.-. -..+=|++.|+|+|+-.. -|..+.+ |...++++. -+.+++.+++. ++++|.+.+++
T Consensus 330 l~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~l--g~~~~~~~~~~l~~~~Li~~v~----~~~~~r~~~~~ 398 (426)
T PRK10017 330 LTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQL--GLPEMAIDIRHLLDGSLQAMVA----DTLGQLPALNA 398 (426)
T ss_pred EEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHc--CCccEEechhhCCHHHHHHHHH----HHHhCHHHHHH
Confidence 9876532 267889999999999643 2333333 223344443 34566777764 45567655444
No 141
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=96.68 E-value=0.0049 Score=73.54 Aligned_cols=149 Identities=13% Similarity=0.018 Sum_probs=104.6
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHH-HHHH---HHHhHccC----CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHH
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTG-LTEW---YGKNKRLR----NLVNLVIVGAFFDPSKSKDREETAEIKKMHALM 594 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~-LieA---~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 594 (749)
+.|...+++...++++-|+..+|.... ++.. +.++++.. ....+++.|...+ .+..-...++.+..++
T Consensus 520 ~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 595 (798)
T PRK14985 520 RTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKVA 595 (798)
T ss_pred HhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 446666888888999999999999887 5444 45554320 1256666665543 3444444555555555
Q ss_pred HHcC----CCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 036539 595 EKYQ----LKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD 666 (749)
Q Consensus 595 ~~~~----L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d 666 (749)
+..+ +.+ +|.|+. .... .+.+.+-.++||-.+-|. .|+.|..=+=+|.-|.++++|--|...|+.++
T Consensus 596 ~~in~Dp~v~~~lkVVFle----nY~V-slAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~ 670 (798)
T PRK14985 596 EVINNDPLVGDKLKVVFLP----DYCV-SAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQ 670 (798)
T ss_pred HHhcCChhhCCceeEEEeC----CCCh-HHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHH
Confidence 4432 234 688887 3444 444445447999998887 89999999999999999999999999999876
Q ss_pred --CceEEEECCCCHHHH
Q 036539 667 --GVSGFHIDPYNGDES 681 (749)
Q Consensus 667 --g~~G~lv~p~d~e~l 681 (749)
++|||.|-. +.+++
T Consensus 671 vG~eN~f~fG~-~~~ev 686 (798)
T PRK14985 671 VGEENIFIFGH-TVEQV 686 (798)
T ss_pred hCcCcEEEeCC-CHHHH
Confidence 789999964 44443
No 142
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=96.60 E-value=0.011 Score=70.53 Aligned_cols=150 Identities=18% Similarity=0.103 Sum_probs=104.7
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHH-HH---HHHHHhHccC----CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHH
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTG-LT---EWYGKNKRLR----NLVNLVIVGAFFDPSKSKDREETAEIKKMHALM 594 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~-Li---eA~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 594 (749)
+.|...+++...++++-|+..+|.... ++ +.+.++++.- ....+++.|...+ .+..-...++.+..++
T Consensus 518 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 593 (794)
T TIGR02093 518 HTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAP----GYHMAKLIIKLINSVA 593 (794)
T ss_pred hcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCC----CcHHHHHHHHHHHHHH
Confidence 457666888889999999999999888 44 4455554321 1345655555433 2334344455555555
Q ss_pred HHc----CCCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 036539 595 EKY----QLKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD 666 (749)
Q Consensus 595 ~~~----~L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d 666 (749)
+.. .+.+ +|.|+. ..+. .+.+.+-.++|+-.+-|. .|+.|..=+=+|.-|.++++|--|...|+.++
T Consensus 594 ~~iN~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~ 668 (794)
T TIGR02093 594 EVVNNDPAVGDKLKVVFVP----NYNV-SLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREE 668 (794)
T ss_pred HHhccChhhCCceeEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHH
Confidence 432 1334 788887 3444 344444447999998887 89999999999999999999999999999987
Q ss_pred --CceEEEECCCCHHHHH
Q 036539 667 --GVSGFHIDPYNGDESS 682 (749)
Q Consensus 667 --g~~G~lv~p~d~e~lA 682 (749)
++|+|+|-. +.++..
T Consensus 669 vG~eN~fiFG~-~~~ev~ 685 (794)
T TIGR02093 669 VGAENIFIFGL-TVEEVE 685 (794)
T ss_pred hCcccEEEcCC-CHHHHH
Confidence 789999954 445444
No 143
>PLN00414 glycosyltransferase family protein
Probab=96.59 E-value=2 Score=49.22 Aligned_cols=88 Identities=9% Similarity=0.028 Sum_probs=54.3
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccc-cCceEEEECC-----CCHHHH
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEIIV-DGVSGFHIDP-----YNGDES 681 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G----G~~EiI~-dg~~G~lv~p-----~d~e~l 681 (749)
+++..++.+. . +.++||.-. =-++++||+.+|+|+|+-... -.+..+. .-+.|..+.. -+.+++
T Consensus 319 w~PQ~~vL~h-~-~v~~fvtH~----G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i 392 (446)
T PLN00414 319 WVEQPLILSH-P-SVGCFVNHC----GFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESL 392 (446)
T ss_pred cCCHHHHhcC-C-ccceEEecC----chhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHH
Confidence 6777776652 1 235676542 235899999999999996433 3445553 4467777743 366788
Q ss_pred HHHHHHHHHHhcCCH-HHHHHHHHHHHHH
Q 036539 682 SDKIADFFEACKVDP-TYWNKFSTEGLKR 709 (749)
Q Consensus 682 A~aI~~~l~~l~~dp-~~~~~ms~~a~~~ 709 (749)
++++.+++ .++ +..+++.+++++.
T Consensus 393 ~~~v~~~m----~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 393 RDTVKSVM----DKDSEIGNLVKRNHKKL 417 (446)
T ss_pred HHHHHHHh----cCChhhHHHHHHHHHHH
Confidence 88886544 443 4455555555543
No 144
>PLN02554 UDP-glycosyltransferase family protein
Probab=96.57 E-value=2.2 Score=49.38 Aligned_cols=88 Identities=17% Similarity=0.140 Sum_probs=51.7
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----ccc-cccccCceEEEECC
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPA-EIIVDGVSGFHIDP 675 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G----G~~-EiI~dg~~G~lv~p 675 (749)
+++.+.+ +++..++... . +.++||.- -|+ .+++||+.+|+|+|+-... ..+ ..++.-+.|..++.
T Consensus 342 ~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G~-nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~ 411 (481)
T PLN02554 342 DIGKVIG----WAPQVAVLAK-P-AIGGFVTH---CGW-NSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRK 411 (481)
T ss_pred cCceEEe----eCCHHHHhCC-c-ccCccccc---Ccc-chHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeec
Confidence 4555556 7777666642 1 34555543 222 4899999999999996433 333 33444456766641
Q ss_pred -------------CCHHHHHHHHHHHHHHhcCCHHHHHH
Q 036539 676 -------------YNGDESSDKIADFFEACKVDPTYWNK 701 (749)
Q Consensus 676 -------------~d~e~lA~aI~~~l~~l~~dp~~~~~ 701 (749)
-+.++++++|.+++. .|++++++
T Consensus 412 ~~~~~~~~~~~~~~~~e~l~~av~~vm~---~~~~~r~~ 447 (481)
T PLN02554 412 YWRGDLLAGEMETVTAEEIERGIRCLME---QDSDVRKR 447 (481)
T ss_pred cccccccccccCeEcHHHHHHHHHHHhc---CCHHHHHH
Confidence 256777777765441 25554443
No 145
>PLN02173 UDP-glucosyl transferase family protein
Probab=96.57 E-value=2.1 Score=49.09 Aligned_cols=79 Identities=16% Similarity=0.147 Sum_probs=50.4
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-ceEEEECC
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN----QGGPAEIIVDG-VSGFHIDP 675 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~----~GG~~EiI~dg-~~G~lv~p 675 (749)
+++.+.+ +++..++...= +.++||.- +=.++++||+++|+|+|+-. ..-....+.+. +.|.-+..
T Consensus 317 ~~~~i~~----W~PQ~~iL~H~--~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~ 386 (449)
T PLN02173 317 DKSLVLK----WSPQLQVLSNK--AIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKA 386 (449)
T ss_pred CceEEeC----CCCHHHHhCCC--ccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEee
Confidence 5677777 77777766531 13455543 12369999999999999963 33345555543 46766642
Q ss_pred C------CHHHHHHHHHHHH
Q 036539 676 Y------NGDESSDKIADFF 689 (749)
Q Consensus 676 ~------d~e~lA~aI~~~l 689 (749)
. +.+++++++.+++
T Consensus 387 ~~~~~~~~~e~v~~av~~vm 406 (449)
T PLN02173 387 EKESGIAKREEIEFSIKEVM 406 (449)
T ss_pred cccCCcccHHHHHHHHHHHh
Confidence 1 5678888886554
No 146
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=96.48 E-value=0.043 Score=60.59 Aligned_cols=90 Identities=14% Similarity=0.096 Sum_probs=57.6
Q ss_pred cEE-EEEecc-cC-CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCc
Q 036539 533 PII-FSMARL-DV-VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQ 609 (749)
Q Consensus 533 ~vI-l~vGRL-~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~ 609 (749)
++| ++.|.- .+ .+.+..+++++.++.+.. ..+++.|.. . .+.+.+...+. ..+.+.+
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~--~~~~i~~a~-~------------~~~i~~~~~~~---~~~~~~~-- 227 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKE--KILVVPSFF-K------------GKDLKEIYGDI---SEFEISY-- 227 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcC--cEEEEeCCC-c------------HHHHHHHHhcC---CCcEEec--
Confidence 444 444532 22 456677779999988643 567776553 2 13333433322 2344543
Q ss_pred cCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 610 SDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 610 ~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
+.+.+|+ +||+.+..| |.+.+|++.+|+|.|..
T Consensus 228 -------~~~~~m~-~aDlal~~S-----GT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 228 -------DTHKALL-EAEFAFICS-----GTATLEAALIGTPFVLA 260 (347)
T ss_pred -------cHHHHHH-hhhHHHhcC-----cHHHHHHHHhCCCEEEE
Confidence 3467788 599988886 88889999999999985
No 147
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=96.46 E-value=0.55 Score=51.22 Aligned_cols=121 Identities=8% Similarity=0.024 Sum_probs=85.4
Q ss_pred CcEEEEEec-ccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCcc
Q 036539 532 KPIIFSMAR-LDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQS 610 (749)
Q Consensus 532 k~vIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 610 (749)
++.-+.+|+ -++.-+.-..++++.+.. ..++++++-=+-+. ...+|++++.+.++++--.+++..+-
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~-------~n~~Yi~~V~~~~~~lF~~~~~~iL~--- 251 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGA-------NNQAYIQQVIQAGKELFGAENFQILT--- 251 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCC-------chHHHHHHHHHHHHHhcCccceeEhh---
Confidence 344445665 466667777777776533 34677766544432 12467888888888875556787765
Q ss_pred CcCChHHHHHHHHccCcEEEECCC-CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 036539 611 DRLRNGELYRCIADTKGAFVQPAL-YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD 666 (749)
Q Consensus 611 ~~~~~~el~~~la~aadvfV~PS~-~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d 666 (749)
+.++-+|..++++. ||+.++... ..|.| +++=.+.+|+||+-+.....-....+
T Consensus 252 e~mpf~eYl~lL~~-cDl~if~~~RQQgiG-nI~lLl~~G~~v~L~~~np~~~~l~~ 306 (360)
T PF07429_consen 252 EFMPFDEYLALLSR-CDLGIFNHNRQQGIG-NICLLLQLGKKVFLSRDNPFWQDLKE 306 (360)
T ss_pred hhCCHHHHHHHHHh-CCEEEEeechhhhHh-HHHHHHHcCCeEEEecCChHHHHHHh
Confidence 47889999999995 999999874 78898 56668999999999866655444433
No 148
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=96.42 E-value=1.5 Score=47.90 Aligned_cols=132 Identities=16% Similarity=0.176 Sum_probs=75.3
Q ss_pred CCCcEEEEEecccCCCCHHHH---HHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEe
Q 036539 530 RKKPIIFSMARLDVVKNLTGL---TEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWI 606 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~L---ieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 606 (749)
.+..+++++| .-.-|-+.+ ++|+..++...+ .-++|.|.... .+...++.....-.++|..+
T Consensus 218 E~~~Ilvs~G--GG~dG~eLi~~~l~A~~~l~~l~~-~~~ivtGP~MP------------~~~r~~l~~~A~~~p~i~I~ 282 (400)
T COG4671 218 EGFDILVSVG--GGADGAELIETALAAAQLLAGLNH-KWLIVTGPFMP------------EAQRQKLLASAPKRPHISIF 282 (400)
T ss_pred ccceEEEecC--CChhhHHHHHHHHHHhhhCCCCCc-ceEEEeCCCCC------------HHHHHHHHHhcccCCCeEEE
Confidence 3456778887 334444333 333333333222 23555665554 34444455544445778887
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccc--ccc------cCceEEEECCC--
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAE--IIV------DGVSGFHIDPY-- 676 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~E--iI~------dg~~G~lv~p~-- 676 (749)
-+.. ++..+++. |+..|.=+-| +|+.|-+++|||.+.-..+.+.| .+. =|-..++ .|.
T Consensus 283 ~f~~------~~~~ll~g-A~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL-~pe~l 350 (400)
T COG4671 283 EFRN------DFESLLAG-ARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVL-LPENL 350 (400)
T ss_pred Ehhh------hHHHHHHh-hheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceee-CcccC
Confidence 7533 78889995 8887765432 58999999999998865554444 221 1222333 343
Q ss_pred CHHHHHHHHHHH
Q 036539 677 NGDESSDKIADF 688 (749)
Q Consensus 677 d~e~lA~aI~~~ 688 (749)
.++.+|++|...
T Consensus 351 t~~~La~al~~~ 362 (400)
T COG4671 351 TPQNLADALKAA 362 (400)
T ss_pred ChHHHHHHHHhc
Confidence 366677777543
No 149
>PLN03007 UDP-glucosyltransferase family protein
Probab=96.30 E-value=3.1 Score=48.17 Aligned_cols=78 Identities=10% Similarity=0.176 Sum_probs=45.8
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCc--EEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccccc-CceEEE
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKG--AFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVD-GVSGFH 672 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aad--vfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~d-g~~G~l 672 (749)
..++...+ +++..++.. .++ +||.-. | -++++||+.+|+|+|+-...+ .+..+.+ -+.|+-
T Consensus 344 ~~g~~v~~----w~PQ~~iL~----h~~v~~fvtH~---G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~ 411 (482)
T PLN03007 344 GKGLIIRG----WAPQVLILD----HQATGGFVTHC---G-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVS 411 (482)
T ss_pred cCCEEEec----CCCHHHHhc----cCccceeeecC---c-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeE
Confidence 35677777 777766555 343 465542 2 248999999999999964333 3332221 123443
Q ss_pred EC----------CCCHHHHHHHHHHHH
Q 036539 673 ID----------PYNGDESSDKIADFF 689 (749)
Q Consensus 673 v~----------p~d~e~lA~aI~~~l 689 (749)
+. .-+.+++++++.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~~l~~av~~~m 438 (482)
T PLN03007 412 VGAKKLVKVKGDFISREKVEKAVREVI 438 (482)
T ss_pred eccccccccccCcccHHHHHHHHHHHh
Confidence 31 125677778875544
No 150
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.30 E-value=3 Score=47.92 Aligned_cols=79 Identities=13% Similarity=0.201 Sum_probs=50.4
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-ceEEEEC-
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN----QGGPAEIIVDG-VSGFHID- 674 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~----~GG~~EiI~dg-~~G~lv~- 674 (749)
++....+ +++..++...= +.++||.-. |+ ++++||+++|+|+|+-. ....+..+.+. +.|+-+.
T Consensus 324 ~~g~v~~----w~PQ~~iL~h~--~v~~fvtH~---G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~ 393 (451)
T PLN02410 324 GRGYIVK----WAPQKEVLSHP--AVGGFWSHC---GW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG 393 (451)
T ss_pred CCeEEEc----cCCHHHHhCCC--ccCeeeecC---ch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC
Confidence 5555556 77887766631 244566552 22 48999999999999963 33344555443 5777663
Q ss_pred CCCHHHHHHHHHHHH
Q 036539 675 PYNGDESSDKIADFF 689 (749)
Q Consensus 675 p~d~e~lA~aI~~~l 689 (749)
.-+.++++++|.+++
T Consensus 394 ~~~~~~v~~av~~lm 408 (451)
T PLN02410 394 DLDRGAVERAVKRLM 408 (451)
T ss_pred cccHHHHHHHHHHHH
Confidence 236678888886544
No 151
>PLN02210 UDP-glucosyl transferase
Probab=96.28 E-value=3.1 Score=47.86 Aligned_cols=165 Identities=12% Similarity=0.087 Sum_probs=84.4
Q ss_pred CCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEE-EeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCc
Q 036539 531 KKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVI-VGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQ 609 (749)
Q Consensus 531 ~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvI-VG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~ 609 (749)
...+.+++|.+... .-+.+-+++..+... ..+|++ ++.... ..+ .+.+.+... .++....+
T Consensus 269 ~svvyvsfGS~~~~-~~~~~~e~a~~l~~~--~~~flw~~~~~~~---~~~------~~~~~~~~~----~~~g~v~~-- 330 (456)
T PLN02210 269 SSVVYISFGSMLES-LENQVETIAKALKNR--GVPFLWVIRPKEK---AQN------VQVLQEMVK----EGQGVVLE-- 330 (456)
T ss_pred CceEEEEecccccC-CHHHHHHHHHHHHhC--CCCEEEEEeCCcc---ccc------hhhHHhhcc----CCCeEEEe--
Confidence 45677888887542 334455555545443 345544 332111 001 111222211 13333445
Q ss_pred cCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccccc-CceEEEECC------CCH
Q 036539 610 SDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ----GGPAEIIVD-GVSGFHIDP------YNG 678 (749)
Q Consensus 610 ~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~----GG~~EiI~d-g~~G~lv~p------~d~ 678 (749)
+++..++...- +.++||.- -|+ .+++||+.+|+|+|+-.. .-.+..+.+ -+.|..++. -+.
T Consensus 331 --w~PQ~~iL~h~--~vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 331 --WSPQEKILSHM--AISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred --cCCHHHHhcCc--CcCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 77776655521 12466654 222 389999999999999543 334445554 467877742 366
Q ss_pred HHHHHHHHHHHHHhcCCHH------HHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 679 DESSDKIADFFEACKVDPT------YWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~------~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
+++++++.+++ .+++ ...++++.+++-+.+.=|-....+++.+
T Consensus 403 ~~l~~av~~~m----~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~ 451 (456)
T PLN02210 403 EEVERCIEAVT----EGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFIS 451 (456)
T ss_pred HHHHHHHHHHh----cCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 78888886544 4532 2233455555554443333333444433
No 152
>PLN02562 UDP-glycosyltransferase
Probab=96.22 E-value=3.2 Score=47.57 Aligned_cols=88 Identities=16% Similarity=0.177 Sum_probs=57.0
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC----cccccccccc-CceEEEEC
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN----QGGPAEIIVD-GVSGFHID 674 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~----~GG~~EiI~d-g~~G~lv~ 674 (749)
.+++...+ +++..++... . +.++||.- -| -.+++||+.+|+|+|+-. ....+..+.+ -+.|+-+.
T Consensus 327 ~~~~~v~~----w~PQ~~iL~h-~-~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 396 (448)
T PLN02562 327 SKQGKVVS----WAPQLEVLKH-Q-AVGCYLTH---CG-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS 396 (448)
T ss_pred ccCEEEEe----cCCHHHHhCC-C-ccceEEec---Cc-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC
Confidence 35677777 7777777663 1 23455543 22 348999999999999863 4444555544 25677775
Q ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHH
Q 036539 675 PYNGDESSDKIADFFEACKVDPTYWNK 701 (749)
Q Consensus 675 p~d~e~lA~aI~~~l~~l~~dp~~~~~ 701 (749)
.-+.++++++|.+++ .|++++++
T Consensus 397 ~~~~~~l~~~v~~~l----~~~~~r~~ 419 (448)
T PLN02562 397 GFGQKEVEEGLRKVM----EDSGMGER 419 (448)
T ss_pred CCCHHHHHHHHHHHh----CCHHHHHH
Confidence 557788888886544 67665544
No 153
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=96.03 E-value=0.27 Score=59.06 Aligned_cols=189 Identities=14% Similarity=0.098 Sum_probs=123.6
Q ss_pred CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhH
Q 036539 479 PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNK 558 (749)
Q Consensus 479 ~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 558 (749)
..+.++|-|+|...|............ ...+.-. -.++.+|+-+-|++..||+..=+.++.++.
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~---------------~~ei~~~-~~g~klilgvD~~d~~kg~~~Kl~a~e~~L 302 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSK---------------GMEIKEP-FKGKKLILGVDRLDSIKGIQLKLLAFEQFL 302 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHH---------------HHHHhhh-ccCCceEecccccccccCchHHHHHHHHHH
Confidence 356678889988777543321110000 0111110 246788999999999999988888888876
Q ss_pred ccCC----CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHH-cCC--CCcEEEecCccCcCChHHHHHHHHccCcEEEE
Q 036539 559 RLRN----LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEK-YQL--KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQ 631 (749)
Q Consensus 559 ~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~-~~L--~~~V~flG~~~~~~~~~el~~~la~aadvfV~ 631 (749)
..+| .+.++.+..+.......-.+...+.......+++ .+- ...|+++- ..++..++.++++ .+|+...
T Consensus 303 ~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~---~~~~~~~l~a~~~-Vaev~~v 378 (732)
T KOG1050|consen 303 EEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLL---KDLPFLELLALYK-VAEVCPV 378 (732)
T ss_pred HhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEee---ccCCHHHHhhhHH-hhhheee
Confidence 6554 4667777665541111111112222222222222 221 12344332 3677889999999 5999999
Q ss_pred CCCCCCCcHHHHHHHHcC----CcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 632 PALYEAFGLTVIEAMNCG----LPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 632 PS~~E~fGLtvlEAMa~G----lPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.++.+|..++.+|+..|. .+-|.+..-|..+..++ ...+++|.|.++++..|..++
T Consensus 379 ~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d--~aivvnpw~~~~~~~~i~~al 438 (732)
T KOG1050|consen 379 TSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLED--AAIVVNPWDGDEFAILISKAL 438 (732)
T ss_pred cccccccchhhhHHHHhhcccCCceEEeeeccccccccc--cCEEECCcchHHHHHHHHHHh
Confidence 999999999999999984 77888888888888866 457889999999999997766
No 154
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=95.83 E-value=0.43 Score=50.23 Aligned_cols=140 Identities=13% Similarity=0.044 Sum_probs=78.5
Q ss_pred EEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHH------HHH-HHHHc--CCCCcEEEe
Q 036539 536 FSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKK------MHA-LMEKY--QLKGQMRWI 606 (749)
Q Consensus 536 l~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~------l~~-li~~~--~L~~~V~fl 606 (749)
.|+||....||+..+++.-++..+. +...-++-|-... +.-....++ ... .+.+. .-.+.+..+
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS------~A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~ 259 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERS------PAKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPVY 259 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SS------THHHHHHHTT--EEEE-CTGGGG---SSS--EEEE
T ss_pred eeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcC------CceeeeecCCcccccCccccccCcccCCCCcceec
Confidence 7999999999999999999886543 5667777665433 111111110 000 01111 112346677
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCC------CCCCcHHHHHHHHcCC-cEEEcCcccccc-------ccccCceEEE
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPAL------YEAFGLTVIEAMNCGL-PTFATNQGGPAE-------IIVDGVSGFH 672 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~------~E~fGLtvlEAMa~Gl-PVVat~~GG~~E-------iI~dg~~G~l 672 (749)
| +.-++|....|+. +...++-+. .+..--+-+|..|||. ||+-+..|.... .+.+..+.+.
T Consensus 260 ~----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~~I~ 334 (355)
T PF11440_consen 260 G----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYSAIY 334 (355)
T ss_dssp S----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S-EE
T ss_pred c----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcceeE
Confidence 7 7778899999995 666665543 3557789999999996 888776665433 3334456788
Q ss_pred ECCCCHHHHHHHHHH
Q 036539 673 IDPYNGDESSDKIAD 687 (749)
Q Consensus 673 v~p~d~e~lA~aI~~ 687 (749)
++..|-++..++|.+
T Consensus 335 ~De~dle~T~ekl~E 349 (355)
T PF11440_consen 335 FDENDLESTVEKLIE 349 (355)
T ss_dssp E-TTSHHHHHHHHHH
T ss_pred eccchHHHHHHHHHH
Confidence 999999999888854
No 155
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=95.83 E-value=0.029 Score=48.74 Aligned_cols=71 Identities=20% Similarity=0.160 Sum_probs=48.3
Q ss_pred cceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHcCCCcEEEEe
Q 036539 320 KHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDG--NLVASVMASKLGITQATIA 397 (749)
Q Consensus 320 ~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~--~lva~lla~~~gvp~v~t~ 397 (749)
.+.+++.+|+... .+....|.+..... +.+.+.- +++.||||+|...+ +.-+.+-|+.+|++.|+|-
T Consensus 14 ngLKVYYlP~~~~--------~~~~t~Pt~~~~~p-l~R~Ili--rE~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfTD 82 (90)
T PF08288_consen 14 NGLKVYYLPLKVF--------YNQCTLPTLFGSFP-LLRNILI--RERIDIVHGHQAFSTLCHEAILHARTMGLKTVFTD 82 (90)
T ss_pred CCeEEEeecchhh--------hcCcchHHHHHhhH-HHHHHHH--HcCeeEEEeehhhhHHHHHHHHHHHhCCCcEEeec
Confidence 3688889987652 23344454443333 2333332 45899999998776 4557788999999999999
Q ss_pred cCCc
Q 036539 398 HALE 401 (749)
Q Consensus 398 H~l~ 401 (749)
|++.
T Consensus 83 HSLf 86 (90)
T PF08288_consen 83 HSLF 86 (90)
T ss_pred cccc
Confidence 9873
No 156
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=95.62 E-value=0.79 Score=49.91 Aligned_cols=110 Identities=12% Similarity=0.029 Sum_probs=67.6
Q ss_pred CCCcEEEEEecccCCC--CHH---HHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE
Q 036539 530 RKKPIIFSMARLDVVK--NLT---GLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR 604 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~K--gl~---~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 604 (749)
+.+.+.+.+|.=++.- +.+ .|++.+..+.+... ..+.|..+-..| + +..+.+.+. ++-...+.
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp------~--~~~~~L~~~---~~~~~~~~ 212 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTP------P--EAEAALREL---LKDNPGVY 212 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCc------H--HHHHHHHHh---hcCCCceE
Confidence 4455666788533322 223 56666666665544 789888887662 1 112233333 33345664
Q ss_pred EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 036539 605 WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG 659 (749)
Q Consensus 605 flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG 659 (749)
+.. .-..+-+..+|+ .||.++++.. .-.-+.||.++|+||..-...+
T Consensus 213 ~~~----~~~~nPy~~~La-~ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 213 IWD----GTGENPYLGFLA-AADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred Eec----CCCCCcHHHHHH-hCCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 443 223445778888 4999999843 3335789999999999987766
No 157
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=95.57 E-value=0.19 Score=59.72 Aligned_cols=149 Identities=16% Similarity=0.121 Sum_probs=93.0
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHH----HHHHHHhHcc----CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHH
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGL----TEWYGKNKRL----RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALM 594 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~L----ieA~~~l~~~----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 594 (749)
..|...+++...++++-|+..+|..... ++-+.++++. ...+.+++.|...+ .|..-.+.++.+.+++
T Consensus 435 ~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP----~d~~gK~iIk~I~~va 510 (713)
T PF00343_consen 435 RTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHP----GDYMGKEIIKLINNVA 510 (713)
T ss_dssp HHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----T----T-HHHHHHHHHHHHHH
T ss_pred HhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHH
Confidence 4565557888889999999999998883 4556666543 12366777776544 3444445555555555
Q ss_pred HHc----CCCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 036539 595 EKY----QLKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD 666 (749)
Q Consensus 595 ~~~----~L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d 666 (749)
+.. .+.+ +|.|+. ..+. .+.+.+-.++||-.+.|+ .|+.|.+-+=||.-|.+.++|--|...|+.+.
T Consensus 511 ~~in~Dp~v~~~lkVvFle----nYdv-slA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~ 585 (713)
T PF00343_consen 511 EVINNDPEVGDRLKVVFLE----NYDV-SLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEA 585 (713)
T ss_dssp HHHCT-TTTCCGEEEEEET----T-SH-HHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHH
T ss_pred HHHhcChhhccceeEEeec----CCcH-HHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHh
Confidence 432 2334 689987 4444 455566557999999886 89999999999999999999999999999854
Q ss_pred --CceEEEECCCCHHHH
Q 036539 667 --GVSGFHIDPYNGDES 681 (749)
Q Consensus 667 --g~~G~lv~p~d~e~l 681 (749)
.++.|+|-. +.+++
T Consensus 586 vG~eN~fiFG~-~~~ev 601 (713)
T PF00343_consen 586 VGEENIFIFGL-TAEEV 601 (713)
T ss_dssp H-GGGSEEES--BHHHH
T ss_pred cCCCcEEEcCC-CHHHH
Confidence 457888853 44443
No 158
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=95.50 E-value=0.73 Score=48.77 Aligned_cols=139 Identities=22% Similarity=0.257 Sum_probs=80.8
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC
Q 036539 532 KPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD 611 (749)
Q Consensus 532 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 611 (749)
+.+++++|.=|+ ||++. +.++.+.+. ++++.||-+...| ..+.+.+.++++ +++.++-
T Consensus 159 r~ilI~lGGsDp-k~lt~--kvl~~L~~~--~~nl~iV~gs~~p----------~l~~l~k~~~~~---~~i~~~~---- 216 (318)
T COG3980 159 RDILITLGGSDP-KNLTL--KVLAELEQK--NVNLHIVVGSSNP----------TLKNLRKRAEKY---PNINLYI---- 216 (318)
T ss_pred heEEEEccCCCh-hhhHH--HHHHHhhcc--CeeEEEEecCCCc----------chhHHHHHHhhC---CCeeeEe----
Confidence 447778886555 76544 444445442 3677555543221 145566666554 6777753
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCc--EEE--cCcccccccccc----CceEEEECCCCHHHHHH
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP--TFA--TNQGGPAEIIVD----GVSGFHIDPYNGDESSD 683 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlP--VVa--t~~GG~~EiI~d----g~~G~lv~p~d~e~lA~ 683 (749)
..+++.++|.+ ||..+.. -|.|+.||...|+| |++ .+.-..+...+. ...|++.+ ..+...
T Consensus 217 --~~~dma~LMke-~d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l~---~~~~~~ 285 (318)
T COG3980 217 --DTNDMAELMKE-ADLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHLK---DLAKDY 285 (318)
T ss_pred --cchhHHHHHHh-cchheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCCc---hHHHHH
Confidence 35589999996 8887765 38999999999999 333 222222222211 23455532 233444
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHH
Q 036539 684 KIADFFEACKVDPTYWNKFSTEGL 707 (749)
Q Consensus 684 aI~~~l~~l~~dp~~~~~ms~~a~ 707 (749)
.+ ..+.+|+..+..++..++
T Consensus 286 ~~----~~i~~d~~~rk~l~~~~~ 305 (318)
T COG3980 286 EI----LQIQKDYARRKNLSFGSK 305 (318)
T ss_pred HH----HHhhhCHHHhhhhhhccc
Confidence 44 345578887777665543
No 159
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=94.82 E-value=9.8 Score=43.75 Aligned_cols=140 Identities=16% Similarity=0.191 Sum_probs=70.5
Q ss_pred CCcEEEEEecccC--CCCHHHHHHHHHHhHccCCCeEEEE-EeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEec
Q 036539 531 KKPIIFSMARLDV--VKNLTGLTEWYGKNKRLRNLVNLVI-VGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIA 607 (749)
Q Consensus 531 ~k~vIl~vGRL~~--~Kgl~~LieA~~~l~~~~~~v~LvI-VG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG 607 (749)
+..+.+++|.+.. .+-+..+..++..+.. +|+. +.+......+.+.++.........+.++. .++....+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~-----~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~--~~~g~v~~ 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGKR-----PFLWVITDKLNREAKIEGEEETEIEKIAGFRHEL--EEVGMIVS 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcCC-----CeEEEEecCcccccccccccccccccchhHHHhc--cCCeEEEe
Confidence 4566778887652 4455666666665532 3433 33211100000001000000011222222 35555556
Q ss_pred CccCcCChHHHHHHHHccCc--EEEECCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-ceEEEEC-----C
Q 036539 608 AQSDRLRNGELYRCIADTKG--AFVQPALYEAFGLTVIEAMNCGLPTFATN----QGGPAEIIVDG-VSGFHID-----P 675 (749)
Q Consensus 608 ~~~~~~~~~el~~~la~aad--vfV~PS~~E~fGLtvlEAMa~GlPVVat~----~GG~~EiI~dg-~~G~lv~-----p 675 (749)
+++..++.. ... +||.-. =.++++||+.+|+|+|+-. .......+.+. +.|+-+. .
T Consensus 334 ----W~PQ~~iL~----h~~vg~fvtH~----G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~ 401 (455)
T PLN02152 334 ----WCSQIEVLR----HRAVGCFVTHC----GWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGL 401 (455)
T ss_pred ----eCCHHHHhC----CcccceEEeeC----CcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCc
Confidence 777766655 244 455432 2348999999999999963 33344444441 2455542 1
Q ss_pred CCHHHHHHHHHHHH
Q 036539 676 YNGDESSDKIADFF 689 (749)
Q Consensus 676 ~d~e~lA~aI~~~l 689 (749)
.+.+++++++.+++
T Consensus 402 ~~~e~l~~av~~vm 415 (455)
T PLN02152 402 VERGEIRRCLEAVM 415 (455)
T ss_pred CcHHHHHHHHHHHH
Confidence 25678888886655
No 160
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=94.03 E-value=0.53 Score=52.19 Aligned_cols=165 Identities=13% Similarity=0.147 Sum_probs=76.6
Q ss_pred hhcCccCCCCCcEEEEEecccCCCC------HHHH--HHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHH
Q 036539 522 EHIGYLADRKKPIIFSMARLDVVKN------LTGL--TEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHAL 593 (749)
Q Consensus 522 ~~~g~l~~~~k~vIl~vGRL~~~Kg------l~~L--ieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~l 593 (749)
+.+|+ +.++++|+|+=.+..... .... .+.+..+ ..+++.+++-..... ...
T Consensus 184 ~~~~~--~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~li~k~Hp~~----------------~~~ 243 (369)
T PF04464_consen 184 KKLGI--DKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFL--LKNNYVLIIKPHPNM----------------KKK 243 (369)
T ss_dssp HHTT----SS-EEEEEE----GGG--GGSS----TT-HHHHHHH--HTTTEEEEE--SHHH----------------HTT
T ss_pred HHhcc--CCCCcEEEEeeccccccccccccccccccCHHHHHHH--hCCCcEEEEEeCchh----------------hhc
Confidence 34566 677789999965433211 1112 2222222 335777777664422 111
Q ss_pred HHH-cCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc--Cc-------cccccc
Q 036539 594 MEK-YQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT--NQ-------GGPAEI 663 (749)
Q Consensus 594 i~~-~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat--~~-------GG~~Ei 663 (749)
... ....++|.++. +..++..++.. +|++|.= ++-++.|++.+++|||-- |. |...+
T Consensus 244 ~~~~~~~~~~i~~~~------~~~~~~~ll~~-aDiLITD-----ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~- 310 (369)
T PF04464_consen 244 FKDFKEDNSNIIFVS------DNEDIYDLLAA-ADILITD-----YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD- 310 (369)
T ss_dssp ----TT-TTTEEE-T------T-S-HHHHHHT--SEEEES-----S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--
T ss_pred hhhhhccCCcEEECC------CCCCHHHHHHh-cCEEEEe-----chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-
Confidence 111 33457788865 23378999994 9998864 456999999999999954 33 22223
Q ss_pred cccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 036539 664 IVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNM 726 (749)
Q Consensus 664 I~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 726 (749)
..+...|-.+. +.+++.++|.+++ .++....+-.+.-++.. -.|.=...++++.+.
T Consensus 311 ~~~~~pg~~~~--~~~eL~~~i~~~~----~~~~~~~~~~~~~~~~~-~~~~Dg~s~eri~~~ 366 (369)
T PF04464_consen 311 YEEDLPGPIVY--NFEELIEAIENII----ENPDEYKEKREKFRDKF-FKYNDGNSSERIVNY 366 (369)
T ss_dssp TTTSSSS-EES--SHHHHHHHHTTHH----HHHHHTHHHHHHHHHHH-STT--S-HHHHHHHH
T ss_pred hHhhCCCceeC--CHHHHHHHHHhhh----hCCHHHHHHHHHHHHHh-CCCCCchHHHHHHHH
Confidence 22333455554 8899999986654 33433322222222222 124444566666553
No 161
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=93.82 E-value=0.002 Score=63.11 Aligned_cols=91 Identities=18% Similarity=0.216 Sum_probs=56.8
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc--------cccccccCceEEE
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG--------PAEIIVDGVSGFH 672 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG--------~~EiI~dg~~G~l 672 (749)
.+|.+.++.+ ++..+|+. ||++|.-+ =+.|+.|++++|+|.|.-...+ ....+.+...|..
T Consensus 55 ~~v~~~~~~~------~m~~~m~~-aDlvIs~a----G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVD------NMAELMAA-ADLVISHA----GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSS------SHHHHHHH-HSEEEECS-----CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechh------hHHHHHHH-cCEEEeCC----CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 6789998544 47888884 99988753 2479999999999998865544 2222333334444
Q ss_pred ECCC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 036539 673 IDPY--NGDESSDKIADFFEACKVDPTYWNKFSTEG 706 (749)
Q Consensus 673 v~p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a 706 (749)
+... +++.+.++| ..+..++....++++++
T Consensus 124 ~~~~~~~~~~L~~~i----~~l~~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAI----EELLSDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHH----HCHCCCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHH----HHHHcCcHHHHHHHHHH
Confidence 4322 356677777 56678888777766554
No 162
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=93.21 E-value=5.1 Score=42.43 Aligned_cols=103 Identities=14% Similarity=0.153 Sum_probs=62.8
Q ss_pred CCCCcEEEEEecccCC-------CCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHc-CCC
Q 036539 529 DRKKPIIFSMARLDVV-------KNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKY-QLK 600 (749)
Q Consensus 529 ~~~k~vIl~vGRL~~~-------Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~-~L~ 600 (749)
..+++.|++....... .+...+.+.+..+.+..|+++++|-=.... ....+ . ....+. +.
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~-~~~~~------~----~~~~~~~~~- 181 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDE-RGGNK------Y----SYLEELPNL- 181 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchh-hCCCC------h----hHhhhhhcC-
Confidence 5678888888876553 244566677777766667888876554321 00000 0 222222 33
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
.++.++. +...++.++.. +|.++.-+ +.+-+||+.+|+||++-
T Consensus 182 ~~~~~~~------~~~~~~~Ll~~-s~~Vvtin-----StvGlEAll~gkpVi~~ 224 (269)
T PF05159_consen 182 PNVVIID------DDVNLYELLEQ-SDAVVTIN-----STVGLEALLHGKPVIVF 224 (269)
T ss_pred CCeEEEC------CCCCHHHHHHh-CCEEEEEC-----CHHHHHHHHcCCceEEe
Confidence 3444443 12356777775 77766553 56899999999999995
No 163
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=93.14 E-value=8 Score=41.74 Aligned_cols=54 Identities=15% Similarity=0.142 Sum_probs=36.1
Q ss_pred CcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc---ccccccccCceEEEECCCCHHHHHHHHH
Q 036539 626 KGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG---GPAEIIVDGVSGFHIDPYNGDESSDKIA 686 (749)
Q Consensus 626 advfV~PS~~E~fGLtvlEAMa~GlPVVat~~G---G~~EiI~dg~~G~lv~p~d~e~lA~aI~ 686 (749)
|++++- +-|.---||...|+|.|.+.-| +.-+... +.|.++...|+.+..+...
T Consensus 253 a~lvig-----~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~~s~~~~~~~~~a~ 309 (346)
T COG1817 253 ATLVIG-----AGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLYHSTDEIAIVEYAV 309 (346)
T ss_pred hheeec-----CCchHHHHHHHhCCceEEecCCccccccHHHH--hcCceeecCCHHHHHHHHH
Confidence 556543 3466678999999999998744 2333332 3688888888876555553
No 164
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=92.15 E-value=28 Score=40.43 Aligned_cols=79 Identities=13% Similarity=0.050 Sum_probs=49.9
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccc-ccCceEEEECC
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEII-VDGVSGFHIDP 675 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G----G~~EiI-~dg~~G~lv~p 675 (749)
..+.+.+ +++..++...-+ .+.||.- +=-++++||+.+|+|+|+-... .....+ +.-+.|..++.
T Consensus 338 rg~vv~~----W~PQ~~iL~h~~--vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~ 407 (481)
T PLN02992 338 RGFVVPS----WAPQAEILAHQA--VGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDD 407 (481)
T ss_pred CCEEEee----cCCHHHHhCCcc--cCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecC
Confidence 3467767 777777666311 2335543 1235899999999999996433 344454 34456777753
Q ss_pred ----CCHHHHHHHHHHHH
Q 036539 676 ----YNGDESSDKIADFF 689 (749)
Q Consensus 676 ----~d~e~lA~aI~~~l 689 (749)
-+.++++++|.+++
T Consensus 408 ~~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 408 PKEVISRSKIEALVRKVM 425 (481)
T ss_pred CCCcccHHHHHHHHHHHh
Confidence 36678888886654
No 165
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=90.32 E-value=13 Score=39.18 Aligned_cols=112 Identities=9% Similarity=0.020 Sum_probs=65.1
Q ss_pred CCCCcEEEEEecccCCCCH--HHH---HHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHH-cCCCCc
Q 036539 529 DRKKPIIFSMARLDVVKNL--TGL---TEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEK-YQLKGQ 602 (749)
Q Consensus 529 ~~~k~vIl~vGRL~~~Kgl--~~L---ieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~-~~L~~~ 602 (749)
.+..++-+++|.-.+.-.. +.+ +.++-+... .....+++--+-.. -+..+..++. +.-..-
T Consensus 159 ~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~-~~g~~~lisfSRRT------------p~~~~s~l~~~l~s~~~ 225 (329)
T COG3660 159 LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILE-NQGGSFLISFSRRT------------PDTVKSILKNNLNSSPG 225 (329)
T ss_pred CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHH-hCCceEEEEeecCC------------cHHHHHHHHhccccCce
Confidence 3556677888865543333 223 333333222 13467777776655 2345555555 333344
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP 660 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~ 660 (749)
+.|-+.-++ ..-...+++ +||.++..... =.-.-||.+.|+||++-...+.
T Consensus 226 i~w~~~d~g---~NPY~~~La-~Adyii~TaDS---inM~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 226 IVWNNEDTG---YNPYIDMLA-AADYIISTADS---INMCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred eEeCCCCCC---CCchHHHHh-hcceEEEecch---hhhhHHHhccCCCeEEEecCCc
Confidence 666553222 224667788 59999988542 2235799999999998755443
No 166
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=89.85 E-value=2.3 Score=45.09 Aligned_cols=98 Identities=13% Similarity=0.078 Sum_probs=63.7
Q ss_pred EEEEEecccCCC--CHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC
Q 036539 534 IIFSMARLDVVK--NLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD 611 (749)
Q Consensus 534 vIl~vGRL~~~K--gl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 611 (749)
+++..|.-.+.| ..+...+.+..+.+. +++++++|+..+ .+...++.+..+....+.+.|
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e------------~~~~~~i~~~~~~~~~~~~~~---- 185 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAE------------RELAEEIAAALGGPRVVNLAG---- 185 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhh------------HHHHHHHHHhcCCCccccCcC----
Confidence 344444334434 456778888877764 689999987644 333444444443223345566
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
..+-.++..+++. +|++|.+. + | .+-=|.+.|+|+|+-
T Consensus 186 ~~~l~e~~~li~~-~~l~I~~D---s-g-~~HlA~a~~~p~i~l 223 (279)
T cd03789 186 KTSLRELAALLAR-ADLVVTND---S-G-PMHLAAALGTPTVAL 223 (279)
T ss_pred CCCHHHHHHHHHh-CCEEEeeC---C-H-HHHHHHHcCCCEEEE
Confidence 5678899999996 99999984 2 3 344456999999995
No 167
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=89.13 E-value=1.1 Score=51.78 Aligned_cols=131 Identities=14% Similarity=0.107 Sum_probs=71.7
Q ss_pred CCcEEEEEecccCCCCHHH----HHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEe
Q 036539 531 KKPIIFSMARLDVVKNLTG----LTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWI 606 (749)
Q Consensus 531 ~k~vIl~vGRL~~~Kgl~~----LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 606 (749)
++.++++.|.+.. .-.+. ++++++++ |. +++..-.+.. .. .++.++...
T Consensus 276 ~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~----~~-~~iW~~~~~~------------~~---------~l~~n~~~~ 328 (500)
T PF00201_consen 276 KGVVYVSFGSIVS-SMPEEKLKEIAEAFENL----PQ-RFIWKYEGEP------------PE---------NLPKNVLIV 328 (500)
T ss_dssp TEEEEEE-TSSST-T-HHHHHHHHHHHHHCS----TT-EEEEEETCSH------------GC---------HHHTTEEEE
T ss_pred CCEEEEecCcccc-hhHHHHHHHHHHHHhhC----CC-cccccccccc------------cc---------cccceEEEe
Confidence 3456788888753 23333 44444443 34 6666655532 01 123567777
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccCceEEEECCCC--HHH
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ----GGPAEIIVDGVSGFHIDPYN--GDE 680 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~----GG~~EiI~dg~~G~lv~p~d--~e~ 680 (749)
. +++..++... ...++||.- |=-.++.||+.+|+|+|+-.. ...+..+++...|..++..+ .++
T Consensus 329 ~----W~PQ~~lL~h--p~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~ 398 (500)
T PF00201_consen 329 K----WLPQNDLLAH--PRVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEE 398 (500)
T ss_dssp S----S--HHHHHTS--TTEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHH
T ss_pred c----cccchhhhhc--ccceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHH
Confidence 6 7777666441 113455543 223589999999999999633 33455555656788887554 566
Q ss_pred HHHHHHHHHHHhcCCHHHHHHH
Q 036539 681 SSDKIADFFEACKVDPTYWNKF 702 (749)
Q Consensus 681 lA~aI~~~l~~l~~dp~~~~~m 702 (749)
+.++|.+ +++|+.+++..
T Consensus 399 l~~ai~~----vl~~~~y~~~a 416 (500)
T PF00201_consen 399 LRAAIRE----VLENPSYKENA 416 (500)
T ss_dssp HHHHHHH----HHHSHHHHHHH
T ss_pred HHHHHHH----HHhhhHHHHHH
Confidence 7777754 45788766543
No 168
>PLN02670 transferase, transferring glycosyl groups
Probab=86.38 E-value=23 Score=40.94 Aligned_cols=113 Identities=12% Similarity=0.148 Sum_probs=66.0
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccCceEEEECC---
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN----QGGPAEIIVDGVSGFHIDP--- 675 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~----~GG~~EiI~dg~~G~lv~p--- 675 (749)
+.+.+ +++..++...= +.++||.- +=-++++||+++|+|+|+-. .......+..-+.|..++.
T Consensus 341 ~vv~~----W~PQ~~IL~H~--~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~ 410 (472)
T PLN02670 341 MIHVG----WVPQVKILSHE--SVGGFLTH----CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDER 410 (472)
T ss_pred eEEeC----cCCHHHHhcCc--ccceeeec----CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeecccc
Confidence 45555 67776765521 23345543 11258999999999999963 3334555555678887753
Q ss_pred ---CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH---HHHHHhCCHHHHHHHHHHHHHHh
Q 036539 676 ---YNGDESSDKIADFFEACKVDPTYWNKFSTEGL---KRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 676 ---~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~---~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
-+.++++++|.+++ .+++ -.++.++++ +.+.++=+-..+++.+++..+.+
T Consensus 411 ~~~~~~e~i~~av~~vm----~~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 411 DGSFTSDSVAESVRLAM----VDDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred CCcCcHHHHHHHHHHHh----cCcc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 24677888886544 5541 122333333 33445556666777777655443
No 169
>PLN03015 UDP-glucosyl transferase
Probab=85.92 E-value=74 Score=36.82 Aligned_cols=72 Identities=14% Similarity=0.153 Sum_probs=42.1
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccc-ccCceEEEEC------CCCHHH
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEII-VDGVSGFHID------PYNGDE 680 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI-~dg~~G~lv~------p~d~e~ 680 (749)
+++..++...= +.+.||.-. | -++++||+.+|+|+|+-..-+ ....+ +.-..|.-+. .-..++
T Consensus 342 W~PQ~~vL~h~--~vg~fvtH~---G-wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~ 415 (470)
T PLN03015 342 WAPQVEILSHR--SIGGFLSHC---G-WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREE 415 (470)
T ss_pred cCCHHHHhccC--ccCeEEecC---C-chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHH
Confidence 66676766631 234555442 1 248999999999999964332 33333 3334565553 124567
Q ss_pred HHHHHHHHH
Q 036539 681 SSDKIADFF 689 (749)
Q Consensus 681 lA~aI~~~l 689 (749)
++++|.+++
T Consensus 416 i~~~v~~lm 424 (470)
T PLN03015 416 VASLVRKIV 424 (470)
T ss_pred HHHHHHHHH
Confidence 777775544
No 170
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=85.02 E-value=8.3 Score=42.51 Aligned_cols=103 Identities=9% Similarity=0.047 Sum_probs=64.3
Q ss_pred CCcEEEEEecccCCCC--HHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 531 KKPIIFSMARLDVVKN--LTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 531 ~k~vIl~vGRL~~~Kg--l~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
++.+++..|.-.+.|. .+...+.+..+.+ .+.+++++|+..+ +| .+...++++.......+.+.|
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~vvl~ggp~e-------~e---~~~~~~i~~~~~~~~~~~l~g- 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEVVLTSGPDK-------DD---LACVNEIAQGCQTPPVTALAG- 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEcCCCh-------HH---HHHHHHHHHhcCCCccccccC-
Confidence 3455666665445665 3466677766654 2578888886543 11 222233333322223355667
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
..+-.++..+++. ++++|... + | .+-=|-|.|+|+|+=
T Consensus 250 ---~~sL~el~ali~~-a~l~v~nD---S-G-p~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 ---KTTFPELGALIDH-AQLFIGVD---S-A-PAHIAAAVNTPLICL 287 (352)
T ss_pred ---CCCHHHHHHHHHh-CCEEEecC---C-H-HHHHHHHcCCCEEEE
Confidence 7778999999995 99999884 2 2 344567889999984
No 171
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=84.47 E-value=9.7 Score=41.48 Aligned_cols=101 Identities=16% Similarity=0.045 Sum_probs=63.0
Q ss_pred CCCcE-EEEEec-ccCCCCHH--HHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEE
Q 036539 530 RKKPI-IFSMAR-LDVVKNLT--GLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRW 605 (749)
Q Consensus 530 ~~k~v-Il~vGR-L~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~f 605 (749)
.++++ ++..|. ..+.|... ...+.+..+.+. +.+++++|+..+ .+...++.+..+ ...+.+
T Consensus 172 ~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~--~~~ivl~G~~~e------------~~~~~~i~~~~~-~~~~~l 236 (334)
T TIGR02195 172 TERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ--GYQVVLFGSAKD------------HPAGNEIEALLP-GELRNL 236 (334)
T ss_pred CCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHC--CCEEEEEEChhh------------HHHHHHHHHhCC-cccccC
Confidence 34444 455554 44566544 677777776542 478889987644 223333333322 122335
Q ss_pred ecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 606 IAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 606 lG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
.| ..+-.++..+++. +|++|..- +- .+-=|-|.|+|+|+=
T Consensus 237 ~g----~~sL~el~ali~~-a~l~I~~D---SG--p~HlAaA~~~P~i~l 276 (334)
T TIGR02195 237 AG----ETSLDEAVDLIAL-AKAVVTND---SG--LMHVAAALNRPLVAL 276 (334)
T ss_pred CC----CCCHHHHHHHHHh-CCEEEeeC---CH--HHHHHHHcCCCEEEE
Confidence 66 6778999999995 99999884 22 444577999999983
No 172
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=83.88 E-value=2.5 Score=37.59 Aligned_cols=83 Identities=17% Similarity=0.208 Sum_probs=57.0
Q ss_pred EEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHH--HHHHHHccCcEEEECCCCCCCc---H
Q 036539 566 LVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGE--LYRCIADTKGAFVQPALYEAFG---L 640 (749)
Q Consensus 566 LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~e--l~~~la~aadvfV~PS~~E~fG---L 640 (749)
++|||+-.. ....+++.++++|. .+.++|... ...... +...+.+ +|++|++..+=+-. .
T Consensus 2 vliVGG~~~-----------~~~~~~~~~~~~G~--~~~~hg~~~-~~~~~~~~l~~~i~~-aD~VIv~t~~vsH~~~~~ 66 (97)
T PF10087_consen 2 VLIVGGRED-----------RERRYKRILEKYGG--KLIHHGRDG-GDEKKASRLPSKIKK-ADLVIVFTDYVSHNAMWK 66 (97)
T ss_pred EEEEcCCcc-----------cHHHHHHHHHHcCC--EEEEEecCC-CCccchhHHHHhcCC-CCEEEEEeCCcChHHHHH
Confidence 678888333 25778889999874 455553222 334444 8888885 99999987654443 3
Q ss_pred HHHHHHHcCCcEEEcCccccccc
Q 036539 641 TVIEAMNCGLPTFATNQGGPAEI 663 (749)
Q Consensus 641 tvlEAMa~GlPVVat~~GG~~Ei 663 (749)
+--+|-..|+|++.+...|...+
T Consensus 67 vk~~akk~~ip~~~~~~~~~~~l 89 (97)
T PF10087_consen 67 VKKAAKKYGIPIIYSRSRGVSSL 89 (97)
T ss_pred HHHHHHHcCCcEEEECCCCHHHH
Confidence 45677888999999987666544
No 173
>PLN02167 UDP-glycosyltransferase family protein
Probab=83.33 E-value=28 Score=40.29 Aligned_cols=79 Identities=15% Similarity=0.159 Sum_probs=48.0
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----ccc-ccccCceEEEECC
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAE-IIVDGVSGFHIDP 675 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~E-iI~dg~~G~lv~p 675 (749)
++....+ +++..++...= +.++||.-. |+ .+++||+++|+|+|+-...+ ... +++.-+.|+.++.
T Consensus 340 ~rg~v~~----w~PQ~~iL~h~--~vg~fvtH~---G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 409 (475)
T PLN02167 340 GRGLVCG----WAPQVEILAHK--AIGGFVSHC---GW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRL 409 (475)
T ss_pred cCeeeec----cCCHHHHhcCc--ccCeEEeeC---Cc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeec
Confidence 3444556 77777766532 245666542 22 38999999999999964332 332 3444456776642
Q ss_pred ---------CCHHHHHHHHHHHH
Q 036539 676 ---------YNGDESSDKIADFF 689 (749)
Q Consensus 676 ---------~d~e~lA~aI~~~l 689 (749)
-+.++++++|.+++
T Consensus 410 ~~~~~~~~~~~~~~l~~av~~~m 432 (475)
T PLN02167 410 DYVSAYGEIVKADEIAGAVRSLM 432 (475)
T ss_pred ccccccCCcccHHHHHHHHHHHh
Confidence 25677777776544
No 174
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=83.21 E-value=7.7 Score=40.12 Aligned_cols=103 Identities=17% Similarity=0.063 Sum_probs=59.3
Q ss_pred CCCcEEEEEecccCCCCHH--HHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEec
Q 036539 530 RKKPIIFSMARLDVVKNLT--GLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIA 607 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG 607 (749)
+++.+++..|.-.+.|... ...+.+..+.+.. ++++++|+..+ .+.+...++.+... ...+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~----------~~~~~~~~~~~~~~-~~~~~~~~ 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEE----------QEKEIADQIAAGLQ-NPVINLAG 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHH----------HHHHHHHHHHTTHT-TTTEEETT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchH----------HHHHHHHHHHHhcc-cceEeecC
Confidence 3444666666655666644 4777877776643 78888887743 11222223333221 12577777
Q ss_pred CccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 608 AQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 608 ~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
..+-.++..+++. +|++|.+- +. .+-=|.|.|+|+|+=
T Consensus 171 ----~~~l~e~~ali~~-a~~~I~~D---tg--~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 ----KTSLRELAALISR-ADLVIGND---TG--PMHLAAALGTPTVAL 208 (247)
T ss_dssp ----TS-HHHHHHHHHT-SSEEEEES---SH--HHHHHHHTT--EEEE
T ss_pred ----CCCHHHHHHHHhc-CCEEEecC---Ch--HHHHHHHHhCCEEEE
Confidence 6778999999995 99999983 32 455678899999995
No 175
>PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth []. Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A.
Probab=81.71 E-value=24 Score=37.66 Aligned_cols=151 Identities=17% Similarity=0.156 Sum_probs=87.0
Q ss_pred cEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCc
Q 036539 533 PIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDR 612 (749)
Q Consensus 533 ~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~ 612 (749)
+.++.++.=.+.|+++.|++++++.+. .+++-..|.|.. . .-....+.++.|+. ++++++..
T Consensus 79 ~~vl~v~~dsp~~t~~eli~~ak~~p~---~~~~g~~g~g~~-------~----hl~~~~l~~~~G~~--~~~Vpy~G-- 140 (274)
T PF03401_consen 79 PNVLVVRADSPYKTLEELIEYAKANPG---KLTFGSSGPGSS-------D----HLAAALLAKAAGIK--FTHVPYDG-- 140 (274)
T ss_dssp EEEEEEETTSS-SSHHHHHHHHHCSCC---C-EEEESSTTSH-------H----HHHHHHHHHHHT-----EEEE-SS--
T ss_pred ceEEEEeCCCccccHHHHHHHHHhCCC---CeEEEecCCCch-------H----HHHHHHHHHHhCCc--eEEEEeCC--
Confidence 466777766789999999999987543 345544443322 0 11234456677764 45555422
Q ss_pred CChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC-cEEE-c---Cccc-----------cccccccCceEEEECCC
Q 036539 613 LRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL-PTFA-T---NQGG-----------PAEIIVDGVSGFHIDPY 676 (749)
Q Consensus 613 ~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~Gl-PVVa-t---~~GG-----------~~EiI~dg~~G~lv~p~ 676 (749)
..+.+..++....|+.+.. .-........|. -+++ + +... ..++....-.|+.++++
T Consensus 141 -~~~~~~allgG~vd~~~~~------~~~~~~~~~~G~~k~Lav~~~~r~~~~pdvPT~~E~G~~d~~~~~~~g~~~p~g 213 (274)
T PF03401_consen 141 -GAEALTALLGGHVDAAFGS------PGEALPYVEAGDLKPLAVFSDERSPALPDVPTFKEQGYPDIVFGSWRGLFAPKG 213 (274)
T ss_dssp -HHHHHHHHHTTSSSEEEEE------HHHHHHHHHTTSEEEEEECSSS-BTTCTTS-BTTTTT-TTG--EEEEEEEEETT
T ss_pred -ccHHHHHHhCCeeeEEeec------HHHHHHHHhCCCceEEEEecCccccccCCCCCHHHhCccceeeeeeeeeecCCC
Confidence 2556777777777776653 123344444453 2222 1 1111 22222334468999999
Q ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 036539 677 NGDESSDKIADFFEACKVDPTYWNKFSTEGLK 708 (749)
Q Consensus 677 d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~ 708 (749)
-+++..+++.+++++..+||+..+.+.+.+..
T Consensus 214 tp~~~~~~l~~a~~~~~~~pe~~~~~~~~g~~ 245 (274)
T PF03401_consen 214 TPDEIVDKLADAIKKALEDPEFQEFLEKMGLE 245 (274)
T ss_dssp S-HHHHHHHHHHHHHHHT-HHHHHHHHHHTEE
T ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHCCCc
Confidence 99999999999999999999988877666543
No 176
>PLN02764 glycosyltransferase family protein
Probab=81.56 E-value=62 Score=37.26 Aligned_cols=91 Identities=12% Similarity=0.107 Sum_probs=54.8
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccccc-CceEEEECC--
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVD-GVSGFHIDP-- 675 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~d-g~~G~lv~p-- 675 (749)
+...+ +++..++...= +.++||.-. =-.+++||+.+|+|+|+-...+ .+..+.+ -..|+.+.+
T Consensus 319 ~v~~~----W~PQ~~vL~h~--~v~~FvtH~----G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~ 388 (453)
T PLN02764 319 VVWGG----WVQQPLILSHP--SVGCFVSHC----GFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREE 388 (453)
T ss_pred cEEeC----CCCHHHHhcCc--ccCeEEecC----CchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEecccc
Confidence 44555 77777776631 245676542 2358999999999999964443 4455533 356766532
Q ss_pred ---CCHHHHHHHHHHHHHHhcCCH-HHHHHHHHHHH
Q 036539 676 ---YNGDESSDKIADFFEACKVDP-TYWNKFSTEGL 707 (749)
Q Consensus 676 ---~d~e~lA~aI~~~l~~l~~dp-~~~~~ms~~a~ 707 (749)
-+.+++++++.+++ .++ +..+++.++++
T Consensus 389 ~~~~~~e~i~~av~~vm----~~~~~~g~~~r~~a~ 420 (453)
T PLN02764 389 TGWFSKESLRDAINSVM----KRDSEIGNLVKKNHT 420 (453)
T ss_pred CCccCHHHHHHHHHHHh----cCCchhHHHHHHHHH
Confidence 25677888886544 553 33444444443
No 177
>PLN03004 UDP-glycosyltransferase
Probab=80.76 E-value=36 Score=39.19 Aligned_cols=84 Identities=17% Similarity=0.143 Sum_probs=54.1
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcE--EEECCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CceEEEE
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGA--FVQPALYEAFGLTVIEAMNCGLPTFAT----NQGGPAEIIVD-GVSGFHI 673 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadv--fV~PS~~E~fGLtvlEAMa~GlPVVat----~~GG~~EiI~d-g~~G~lv 673 (749)
.++...+ +++..++.. .+++ ||.- +=-++++||+++|+|+|+- |.......+.+ -+.|..+
T Consensus 334 ~g~~v~~----W~PQ~~iL~----H~~v~~FvTH----~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l 401 (451)
T PLN03004 334 KGMVVKS----WAPQVPVLN----HKAVGGFVTH----CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISM 401 (451)
T ss_pred CcEEEEe----eCCHHHHhC----CCccceEecc----CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEe
Confidence 4577666 777777655 4666 5543 1234899999999999996 44445555543 3578777
Q ss_pred CC-----CCHHHHHHHHHHHHHHhcCCHHHHH
Q 036539 674 DP-----YNGDESSDKIADFFEACKVDPTYWN 700 (749)
Q Consensus 674 ~p-----~d~e~lA~aI~~~l~~l~~dp~~~~ 700 (749)
+. -+.++++++|.+++ .++.+++
T Consensus 402 ~~~~~~~~~~e~l~~av~~vm----~~~~~r~ 429 (451)
T PLN03004 402 NESETGFVSSTEVEKRVQEII----GECPVRE 429 (451)
T ss_pred cCCcCCccCHHHHHHHHHHHh----cCHHHHH
Confidence 53 25678888885544 6655443
No 178
>PLN02555 limonoid glucosyltransferase
Probab=80.13 E-value=49 Score=38.38 Aligned_cols=80 Identities=15% Similarity=0.190 Sum_probs=50.5
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccC-ceEEEEC
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ----GGPAEIIVDG-VSGFHID 674 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~----GG~~EiI~dg-~~G~lv~ 674 (749)
.+++...+ +++..++... . +.++||.-. | -.+++||+.+|+|+|+-.. ......+.+. +.|+-+.
T Consensus 336 ~~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH~---G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQ----WCPQEKVLAH-P-SVACFVTHC---G-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEe----cCCHHHHhCC-C-ccCeEEecC---C-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 35666666 7777776643 1 356676542 2 3489999999999999643 3344444443 5777662
Q ss_pred -----C--CCHHHHHHHHHHHH
Q 036539 675 -----P--YNGDESSDKIADFF 689 (749)
Q Consensus 675 -----p--~d~e~lA~aI~~~l 689 (749)
. -+.++++++|.+.+
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm 427 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT 427 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh
Confidence 1 14677888886554
No 179
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=79.88 E-value=1.1e+02 Score=34.38 Aligned_cols=87 Identities=21% Similarity=0.257 Sum_probs=54.1
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEE--EE
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEIIVDGVSGF--HI 673 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G----G~~EiI~dg~~G~--lv 673 (749)
..++.+.. .....++-..++. +|++|-.-+ -+++=||+.|+|+|+=..- |+.+-. |-.|+ .+
T Consensus 265 ~~~i~~~~----d~~~~~~~~~l~~-~dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~--gl~~~~~~i 332 (385)
T COG2327 265 SAEILVSS----DEYAEELGGILAA-CDLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDL--GLPGFAIDI 332 (385)
T ss_pred ccceEeec----chHHHHHHHHhcc-CceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHc--CCCcccccC
Confidence 36677764 2224667778884 888775432 2678899999999995433 233322 22333 44
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHH
Q 036539 674 DPYNGDESSDKIADFFEACKVDPTYWNK 701 (749)
Q Consensus 674 ~p~d~e~lA~aI~~~l~~l~~dp~~~~~ 701 (749)
.|.|.+.+.+...+++ ..+++.+++
T Consensus 333 ~~~~~~~l~~~~~e~~---~~~~~~~~~ 357 (385)
T COG2327 333 DPLDAEILSAVVLERL---TKLDELRER 357 (385)
T ss_pred CCCchHHHHHHHHHHH---hccHHHHhh
Confidence 6677888888887655 356655444
No 180
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=79.77 E-value=59 Score=33.73 Aligned_cols=152 Identities=13% Similarity=0.063 Sum_probs=82.4
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHH-
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLT- 641 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLt- 641 (749)
.+++.||..... +++.++++ .++++|.-. ....++ +.+ +++++...--+...-.
T Consensus 48 gA~VtVVap~i~-------------~el~~l~~----~~~i~~~~r---~~~~~d----l~g-~~LViaATdD~~vN~~I 102 (223)
T PRK05562 48 GCYVYILSKKFS-------------KEFLDLKK----YGNLKLIKG---NYDKEF----IKD-KHLIVIATDDEKLNNKI 102 (223)
T ss_pred CCEEEEEcCCCC-------------HHHHHHHh----CCCEEEEeC---CCChHH----hCC-CcEEEECCCCHHHHHHH
Confidence 578888887655 33444443 356888752 222333 343 5555554444444433
Q ss_pred HHHHHHcCCcEEEcCcccccccc-----ccCceEEEE-CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 036539 642 VIEAMNCGLPTFATNQGGPAEII-----VDGVSGFHI-DPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYT 715 (749)
Q Consensus 642 vlEAMa~GlPVVat~~GG~~EiI-----~dg~~G~lv-~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ys 715 (749)
.-+|.+.|.+|.+.+.....+++ ..|.--+-+ ..+..-.+|..|.+-++.++.+-+.+-++....|+.+.++
T Consensus 103 ~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST~G~sP~lar~lR~~ie~~l~~~~~l~~~l~~~R~~vk~~-- 180 (223)
T PRK05562 103 RKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNTKGGSPKTSVFIGEKVKNFLKKYDDFIEYVTKIRNKAKKN-- 180 (223)
T ss_pred HHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEECCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 45666779999987665544443 333222222 2233456777787777777644455556666667776554
Q ss_pred HHHHHHHHHHHHHHhHhHHhhhhhhhHH
Q 036539 716 WKIYANKMLNMGCMYSFWKQLNKGQKLA 743 (749)
Q Consensus 716 w~~~a~~ll~ly~~~~~~~~~~~~~~~~ 743 (749)
..-+++++....-.+|..+.+.++.+
T Consensus 181 --~~r~~i~~~l~~~~~~~~l~~~~~~~ 206 (223)
T PRK05562 181 --ELKDEIIEFICSDDFYFFYKKGKANL 206 (223)
T ss_pred --hHHHHHHHHHhChHHHHHHHcchHHH
Confidence 22333344444445666654444443
No 181
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=79.72 E-value=19 Score=39.42 Aligned_cols=101 Identities=13% Similarity=0.069 Sum_probs=62.4
Q ss_pred cEEEEEecccCCCC--HHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCcc
Q 036539 533 PIIFSMARLDVVKN--LTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQS 610 (749)
Q Consensus 533 ~vIl~vGRL~~~Kg--l~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 610 (749)
.+++..|.-.+.|. .+...+.+..+.+. +.+++++|+..+ +| .+...++.+..+-...+.+.|
T Consensus 183 ~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~--~~~ivl~g~p~~-------~e---~~~~~~i~~~~~~~~~~~l~g--- 247 (344)
T TIGR02201 183 YIVIQPTSRWFFKCWDNDRFSALIDALHAR--GYEVVLTSGPDK-------DE---LAMVNEIAQGCQTPRVTSLAG--- 247 (344)
T ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHhC--CCeEEEecCCCH-------HH---HHHHHHHHhhCCCCcccccCC---
Confidence 34555564344554 45666666666542 578899986532 11 222233333333222344666
Q ss_pred CcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 611 DRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 611 ~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
..+-.++..+++. ++++|... + -.+-=|-|.|+|+|+=
T Consensus 248 -~~sL~el~ali~~-a~l~Vs~D---S--Gp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 248 -KLTLPQLAALIDH-ARLFIGVD---S--VPMHMAAALGTPLVAL 285 (344)
T ss_pred -CCCHHHHHHHHHh-CCEEEecC---C--HHHHHHHHcCCCEEEE
Confidence 7789999999995 99999883 2 2455578899999984
No 182
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=78.53 E-value=7.2 Score=44.90 Aligned_cols=100 Identities=9% Similarity=-0.066 Sum_probs=62.6
Q ss_pred HHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchh
Q 036539 430 IAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPE 509 (749)
Q Consensus 430 ~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~ 509 (749)
-....+|.++++|+..+...... ...++ ..++.+..+++|.+.+.+........
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~~------------------~~~L~--~~d~~~~y~ei~~s~~~~~~~~~~~~------ 258 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKAT------------------FVSLS--NSDITSTYPEIDGSWFTYGQYESHLE------ 258 (495)
T ss_pred hhhhccceEecchhhhhhhhhhh------------------hhhcC--CCCcceeeccccchhccccccccchh------
Confidence 35667899999998766522221 11233 44588899999988776521111000
Q ss_pred hHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC
Q 036539 510 IEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNL 563 (749)
Q Consensus 510 ~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~ 563 (749)
-....+...|. ...+..+..+-|+.+.||++.+++++..+....++
T Consensus 259 ------~~~~~r~~~~v--~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~ 304 (495)
T KOG0853|consen 259 ------LRLPVRLYRGV--SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPE 304 (495)
T ss_pred ------cccccceeeee--cccceEeeeeeecCCCCCceeehhhHHhhhcccCC
Confidence 01111223444 44467889999999999999999999988765443
No 183
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=78.30 E-value=22 Score=38.44 Aligned_cols=99 Identities=13% Similarity=-0.030 Sum_probs=63.3
Q ss_pred CCcEEEEEecccCCCCH--HHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 531 KKPIIFSMARLDVVKNL--TGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 531 ~k~vIl~vGRL~~~Kgl--~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
++.+++..|.=.+.|.. +...+.+..+.+. +++++++|+++. +.+...++.+..+ +..+.|
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~~-----------e~~~~~~i~~~~~---~~~l~g- 241 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLAR--GLQIVLPWGNDA-----------EKQRAERIAEALP---GAVVLP- 241 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC--CCeEEEeCCCHH-----------HHHHHHHHHhhCC---CCeecC-
Confidence 34456666644456654 4677777776542 578888866543 1233334443332 235567
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
..+-.++..+++. |+++|..- +- .+-=|-|.|+|+|+=
T Consensus 242 ---~~sL~el~ali~~-a~l~I~~D---Sg--p~HlAaa~g~P~i~l 279 (319)
T TIGR02193 242 ---KMSLAEVAALLAG-ADAVVGVD---TG--LTHLAAALDKPTVTL 279 (319)
T ss_pred ---CCCHHHHHHHHHc-CCEEEeCC---Ch--HHHHHHHcCCCEEEE
Confidence 6789999999995 99999883 33 344466889999984
No 184
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=77.48 E-value=17 Score=39.78 Aligned_cols=98 Identities=15% Similarity=0.094 Sum_probs=67.6
Q ss_pred CcEEEEEe-cccCCCCHH--HHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 532 KPIIFSMA-RLDVVKNLT--GLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 532 k~vIl~vG-RL~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
+-+++..| .-...|+.. ...+.+..+.+.. .++++.|+..+ .+...++.+.++ ..+...|
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~~e------------~e~~~~i~~~~~--~~~~l~~- 238 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQVVLFGGPDE------------EERAEEIAKGLP--NAVILAG- 238 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEEEEecChHH------------HHHHHHHHHhcC--CccccCC-
Confidence 44566667 555666644 6777777777654 78999998833 444555555553 2233666
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
..+-.++..+++. ||++|.+.. | .+-=|-|.|+|+|+-
T Consensus 239 ---k~sL~e~~~li~~-a~l~I~~DS----g-~~HlAaA~~~P~I~i 276 (334)
T COG0859 239 ---KTSLEELAALIAG-ADLVIGNDS----G-PMHLAAALGTPTIAL 276 (334)
T ss_pred ---CCCHHHHHHHHhc-CCEEEccCC----h-HHHHHHHcCCCEEEE
Confidence 7889999999995 999998842 2 344577889999995
No 185
>PLN00164 glucosyltransferase; Provisional
Probab=76.82 E-value=43 Score=38.84 Aligned_cols=77 Identities=17% Similarity=0.207 Sum_probs=45.6
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccc-ccCceEEEECC--
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT----NQGGPAEII-VDGVSGFHIDP-- 675 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat----~~GG~~EiI-~dg~~G~lv~p-- 675 (749)
+...+ +++..++...= +.++||.- -|+ .+++||+++|+|+|+- |..-....+ +.-+.|+.++.
T Consensus 341 ~~v~~----w~PQ~~iL~h~--~vg~fvtH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~ 410 (480)
T PLN00164 341 LVWPT----WAPQKEILAHA--AVGGFVTH---CGW-NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDR 410 (480)
T ss_pred eEEee----cCCHHHHhcCc--ccCeEEee---ccc-chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEecccc
Confidence 44545 66666665521 12345543 222 4899999999999995 333344434 33457777642
Q ss_pred -----CCHHHHHHHHHHHH
Q 036539 676 -----YNGDESSDKIADFF 689 (749)
Q Consensus 676 -----~d~e~lA~aI~~~l 689 (749)
-+.++++++|.+++
T Consensus 411 ~~~~~~~~e~l~~av~~vm 429 (480)
T PLN00164 411 KRDNFVEAAELERAVRSLM 429 (480)
T ss_pred ccCCcCcHHHHHHHHHHHh
Confidence 14677777775544
No 186
>PLN02207 UDP-glycosyltransferase
Probab=74.59 E-value=82 Score=36.46 Aligned_cols=79 Identities=16% Similarity=0.150 Sum_probs=48.6
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccccc-CceEEEEC-
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEIIVD-GVSGFHID- 674 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G----G~~EiI~d-g~~G~lv~- 674 (749)
++....+ ++++.++...= +.+.||.-. |+ ++++||+.+|+|+|+-... .....+.+ -+.|+-+.
T Consensus 332 ~~g~i~~----W~PQ~~IL~H~--~vg~FvTH~---Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~ 401 (468)
T PLN02207 332 GRGMICG----WSPQVEILAHK--AVGGFVSHC---GW-NSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKL 401 (468)
T ss_pred CCeEEEE----eCCHHHHhccc--ccceeeecC---cc-ccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEec
Confidence 4455556 77777777642 244566542 22 3789999999999996433 34443333 44665331
Q ss_pred --------CCCHHHHHHHHHHHH
Q 036539 675 --------PYNGDESSDKIADFF 689 (749)
Q Consensus 675 --------p~d~e~lA~aI~~~l 689 (749)
.-+.++++++|.+++
T Consensus 402 ~~~~~~~~~v~~e~i~~av~~vm 424 (468)
T PLN02207 402 DYRVHSDEIVNANEIETAIRCVM 424 (468)
T ss_pred ccccccCCcccHHHHHHHHHHHH
Confidence 126678888887766
No 187
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=74.15 E-value=35 Score=37.69 Aligned_cols=167 Identities=14% Similarity=0.189 Sum_probs=107.3
Q ss_pred hcCccC-CCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC-CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCC-
Q 036539 523 HIGYLA-DRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRN-LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL- 599 (749)
Q Consensus 523 ~~g~l~-~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~-~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L- 599 (749)
++|... .+.+.+-+|=-+++-.|+-..=+-++.+.-+..| .+..+.|-.... .++..++..++..+.+
T Consensus 180 ~FGY~p~~~~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v~~~~V~Nt~~---------~ke~~~F~~f~~~ldlv 250 (364)
T PF10933_consen 180 RFGYQPGRPGKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAVEHVYVTNTYH---------LKEHPTFVNFANSLDLV 250 (364)
T ss_pred ccccccCCCCceEEEecCCceEEeecCccHHHHHHHHHhChhhcceEEEecchh---------hhcCHHHHHHHHhhHHh
Confidence 355532 2334444555567767763332222222222223 356666665544 1223456666666554
Q ss_pred -CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH
Q 036539 600 -KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNG 678 (749)
Q Consensus 600 -~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~ 678 (749)
++...|.| +. +++.++++-.|++|.-.+.-+.--.-.||+--|=|.|-.. ..+.+ .|+..+-.|.
T Consensus 251 r~gkasfeg----R~---~~p~fla~~tD~VvSHqWeN~lNYlY~daLyggYPLVHNS-----~~l~d--~GYYY~~fD~ 316 (364)
T PF10933_consen 251 RDGKASFEG----RF---DFPDFLAQHTDAVVSHQWENPLNYLYYDALYGGYPLVHNS-----PLLKD--VGYYYPDFDA 316 (364)
T ss_pred hcCeeEEee----ec---ChHHHHHhCCCEEEeccccchhhHHHHHHHhcCCCcccCc-----chhcc--cCcCCCCccH
Confidence 57788988 33 5788888888998877665566678899999999998742 33433 8999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCH
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTW 716 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw 716 (749)
.+-+++|.+++. ++...++...+++++.+ .+++.
T Consensus 317 ~~G~r~L~~A~~---~HD~~~~~Y~~ra~~~l-~~~~p 350 (364)
T PF10933_consen 317 FEGARQLLRAIR---EHDADLDAYRARARRLL-DRLSP 350 (364)
T ss_pred HHHHHHHHHHHH---HccccHHHHHHHHHHHH-HhhCC
Confidence 999999988764 56667778878887776 44443
No 188
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=74.12 E-value=99 Score=33.01 Aligned_cols=86 Identities=19% Similarity=0.148 Sum_probs=51.9
Q ss_pred HHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccC
Q 036539 547 LTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTK 626 (749)
Q Consensus 547 l~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aa 626 (749)
+..+.+++..+.+.. +.+++++..... .| .+..+++.+.+.-...+ +. ..+..++...++. +
T Consensus 190 ~~~l~~~l~~l~~~~-g~~v~~i~~~~~----~D------~~~~~~l~~~~~~~~~i--~~----~~~~~e~~~~i~~-~ 251 (298)
T TIGR03609 190 LLRLLRALDRLQRDT-GAFVLFLPFQQP----QD------LPLARALRDQLLGPAEV--LS----PLDPEELLGLFAS-A 251 (298)
T ss_pred HHHHHHHHHHHHHhh-CCeEEEEeCCcc----hh------HHHHHHHHHhcCCCcEE--Ee----cCCHHHHHHHHhh-C
Confidence 556777777765432 455655553321 11 23334444444322333 33 4567899999996 9
Q ss_pred cEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 627 GAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 627 dvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
+++|.-.+ -..+=|+.+|+|+++-
T Consensus 252 ~~vI~~Rl-----H~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 252 RLVIGMRL-----HALILAAAAGVPFVAL 275 (298)
T ss_pred CEEEEech-----HHHHHHHHcCCCEEEe
Confidence 98776543 2578899999999975
No 189
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=73.56 E-value=9.8 Score=37.47 Aligned_cols=77 Identities=10% Similarity=0.088 Sum_probs=42.9
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCH
Q 036539 365 GGKPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTF 443 (749)
Q Consensus 365 ~~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~ 443 (749)
...+|+|.+.+-.. +-...+.....++|.+.-.|.-..+ ||.+...-.... |. .......-.||.|+.+|.
T Consensus 57 ~~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl~-YP~~~~~~rd~~--~~-----~~ni~saLaAD~v~FNS~ 128 (168)
T PF12038_consen 57 SHSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQLA-YPVSPGQERDFQ--YG-----MNNIYSALAADRVVFNSA 128 (168)
T ss_pred ccCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCccc-CCCCCCcccccc--HH-----HHHHHHHHhceeeeecch
Confidence 34679999775432 2233333344678999999976432 444332211111 11 123334557999999997
Q ss_pred HHHhhc
Q 036539 444 QEIAGS 449 (749)
Q Consensus 444 ~~~~~~ 449 (749)
...+..
T Consensus 129 ~nr~sF 134 (168)
T PF12038_consen 129 FNRDSF 134 (168)
T ss_pred hhHHHH
Confidence 655533
No 190
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=71.28 E-value=58 Score=38.49 Aligned_cols=191 Identities=14% Similarity=0.125 Sum_probs=116.6
Q ss_pred hhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC-
Q 036539 522 EHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK- 600 (749)
Q Consensus 522 ~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~- 600 (749)
..+|+ +.+..++...-.|- |=-...++.+.++.+.-|+..|++.--..- -...++..+++.|++
T Consensus 751 ~~y~L--p~d~vvf~~FNqLy--KidP~~l~~W~~ILk~VPnS~LwllrfPa~-----------ge~rf~ty~~~~Gl~p 815 (966)
T KOG4626|consen 751 SQYGL--PEDAVVFCNFNQLY--KIDPSTLQMWANILKRVPNSVLWLLRFPAV-----------GEQRFRTYAEQLGLEP 815 (966)
T ss_pred CCCCC--CCCeEEEeechhhh--cCCHHHHHHHHHHHHhCCcceeEEEecccc-----------chHHHHHHHHHhCCCc
Confidence 45676 66666666665553 323456666666666677777776654322 135788899999986
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccc-----cccCceEEEECC
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEI-----IVDGVSGFHIDP 675 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~Ei-----I~dg~~G~lv~p 675 (749)
++|.|.. -...+|=.+-.. -+||.+-+-..-|- .|-+|.+.+|+|+|+-...-.+.- +..-..|-++ .
T Consensus 816 ~riifs~----va~k~eHvrr~~-LaDv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hli-a 888 (966)
T KOG4626|consen 816 DRIIFSP----VAAKEEHVRRGQ-LADVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLI-A 888 (966)
T ss_pred cceeecc----ccchHHHHHhhh-hhhhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHH-h
Confidence 6788887 333345455445 37887766554442 366888999999998532211111 1111233344 2
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH--HhCCHHHHHHHHHHHHHHhHhHHhhhhhh
Q 036539 676 YNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRIN--ECYTWKIYANKMLNMGCMYSFWKQLNKGQ 740 (749)
Q Consensus 676 ~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~--~~ysw~~~a~~ll~ly~~~~~~~~~~~~~ 740 (749)
.+-++..+.-. +|..|.+..+++...-+..-. --|+-..++..++.+|.. -|+.-.+.+
T Consensus 889 k~~eEY~~iaV----~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~--MW~~y~~G~ 949 (966)
T KOG4626|consen 889 KNREEYVQIAV----RLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQ--MWKKYCSGE 949 (966)
T ss_pred hhHHHHHHHHH----HhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHH--HHHHhccCC
Confidence 35555555443 466888888887666554321 238999999999999864 577655544
No 191
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=70.32 E-value=34 Score=37.08 Aligned_cols=96 Identities=15% Similarity=0.034 Sum_probs=59.7
Q ss_pred EEEEEecccCCCC--HHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC
Q 036539 534 IIFSMARLDVVKN--LTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD 611 (749)
Q Consensus 534 vIl~vGRL~~~Kg--l~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 611 (749)
+++..|.-...|. .+...+.+..+.+. +.++++.|+++. | .+...++.+. ...+...|
T Consensus 181 i~~~~~~s~~~k~Wp~e~~a~li~~l~~~--~~~ivl~~G~~~--------e---~~~~~~i~~~---~~~~~l~g---- 240 (322)
T PRK10964 181 LVFLHATTRDDKHWPEAHWRELIGLLAPS--GLRIKLPWGAEH--------E---EQRAKRLAEG---FPYVEVLP---- 240 (322)
T ss_pred EEEEeCCCcccccCCHHHHHHHHHHHHHC--CCeEEEeCCCHH--------H---HHHHHHHHcc---CCcceecC----
Confidence 3334443334454 34677777777542 567777654543 1 2223333332 23466777
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
..+-.++..+++. ||++|.... -.+-=|-|+|+|+|+-
T Consensus 241 ~~sL~elaali~~-a~l~I~nDS-----Gp~HlA~A~g~p~val 278 (322)
T PRK10964 241 KLSLEQVARVLAG-AKAVVSVDT-----GLSHLTAALDRPNITL 278 (322)
T ss_pred CCCHHHHHHHHHh-CCEEEecCC-----cHHHHHHHhCCCEEEE
Confidence 6789999999995 999998842 2455678899999994
No 192
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=69.88 E-value=2.3 Score=39.76 Aligned_cols=28 Identities=25% Similarity=0.370 Sum_probs=20.1
Q ss_pred cCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCC
Q 036539 261 TGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 261 tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
|+|-..-.+ .|+++|+++||+|. +.|..
T Consensus 8 t~Ghv~P~l--------ala~~L~~rGh~V~----~~~~~ 35 (139)
T PF03033_consen 8 TRGHVYPFL--------ALARALRRRGHEVR----LATPP 35 (139)
T ss_dssp SHHHHHHHH--------HHHHHHHHTT-EEE----EEETG
T ss_pred ChhHHHHHH--------HHHHHHhccCCeEE----Eeecc
Confidence 456555555 67888999999999 88765
No 193
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=69.36 E-value=46 Score=36.49 Aligned_cols=98 Identities=14% Similarity=0.017 Sum_probs=59.9
Q ss_pred cEEEEEec-ccCCCC--HHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC--Cc-EEEe
Q 036539 533 PIIFSMAR-LDVVKN--LTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK--GQ-MRWI 606 (749)
Q Consensus 533 ~vIl~vGR-L~~~Kg--l~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~--~~-V~fl 606 (749)
.+++..|. ..+.|. .+...+.+..+.+ .+++++++|+..+ .+...++.+..+-. .+ +.+.
T Consensus 182 ~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~--~~~~vvl~Gg~~e------------~~~~~~i~~~~~~~~~~~~~~l~ 247 (348)
T PRK10916 182 IIGFCPGAEFGPAKRWPHYHYAELAQQLID--EGYQVVLFGSAKD------------HEAGNEILAALNTEQQAWCRNLA 247 (348)
T ss_pred EEEEeCCCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEeCHHh------------HHHHHHHHHhcccccccceeecc
Confidence 34455554 334554 3456666666643 3578888887644 22333333333211 12 4455
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEE
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFA 654 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVa 654 (749)
| ..+-.++..+++. ++++|..- +- .+-=|-|.|+|+|+
T Consensus 248 g----~~sL~el~ali~~-a~l~I~nD---TG--p~HlAaA~g~P~va 285 (348)
T PRK10916 248 G----ETQLEQAVILIAA-CKAIVTND---SG--LMHVAAALNRPLVA 285 (348)
T ss_pred C----CCCHHHHHHHHHh-CCEEEecC---Ch--HHHHHHHhCCCEEE
Confidence 6 6678999999995 99999874 22 44557889999998
No 194
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=69.01 E-value=35 Score=34.67 Aligned_cols=39 Identities=15% Similarity=0.100 Sum_probs=27.0
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPD 303 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~ 303 (749)
|||++....|+-. ..+. .|.+.|++.||+|. |+++....
T Consensus 1 M~ILlTNDDGi~a--------------~Gi~--------aL~~~L~~~g~~V~----VvAP~~~~ 39 (196)
T PF01975_consen 1 MRILLTNDDGIDA--------------PGIR--------ALAKALSALGHDVV----VVAPDSEQ 39 (196)
T ss_dssp SEEEEE-SS-TTS--------------HHHH--------HHHHHHTTTSSEEE----EEEESSST
T ss_pred CeEEEEcCCCCCC--------------HHHH--------HHHHHHHhcCCeEE----EEeCCCCC
Confidence 8999999888732 2244 56667777789999 99987544
No 195
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=68.43 E-value=13 Score=39.69 Aligned_cols=70 Identities=10% Similarity=0.097 Sum_probs=49.5
Q ss_pred hHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC-cEEEcCcc--ccccccccCceEEEECCCCHHHHHHHH
Q 036539 615 NGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL-PTFATNQG--GPAEIIVDGVSGFHIDPYNGDESSDKI 685 (749)
Q Consensus 615 ~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~Gl-PVVat~~G--G~~EiI~dg~~G~lv~p~d~e~lA~aI 685 (749)
..+....|++ +...++|.-...+..-++|||++|| |||.++.- ...++|.=....+.++..+..++-+.|
T Consensus 227 ~~~~~~~l~~-S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL 299 (302)
T PF03016_consen 227 PSEYMELLRN-SKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEIL 299 (302)
T ss_pred chHHHHhccc-CeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHH
Confidence 4467777875 8888888777678889999999997 88886522 245666545667778766665554444
No 196
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=68.18 E-value=16 Score=36.74 Aligned_cols=65 Identities=25% Similarity=0.220 Sum_probs=27.3
Q ss_pred CceEEEEcCCCc--hHHHHHHHHcCCCcEEEEecCC-cccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCH
Q 036539 367 KPDLIIGNYSDG--NLVASVMASKLGITQATIAHAL-EKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTF 443 (749)
Q Consensus 367 ~pDIIh~h~~~~--~lva~lla~~~gvp~v~t~H~l-~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~ 443 (749)
+||+++.-..+. |++ ..+++.|+|++..---+ .+ +- ..|..... .-+..++..|.|.+.|.
T Consensus 95 ~P~~~i~~EtElWPnll--~~a~~~~ip~~LvNarls~~-----s~-------~~~~~~~~--~~r~~l~~f~~i~aqs~ 158 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLL--REAKRRGIPVVLVNARLSER-----SF-------RRYRRFPF--LFRPLLSRFDRILAQSE 158 (186)
T ss_dssp --SEEEEES----HHHH--HH-----S-EEEEEE--------------------------H--HHHHHGGG-SEEEESSH
T ss_pred CCCEEEEEccccCHHHH--HHHhhcCCCEEEEeeeeccc-----cc-------hhhhhhHH--HHHHHHHhCCEEEECCH
Confidence 799988766554 444 34467899977543222 11 11 11111111 12346788999999998
Q ss_pred HHHh
Q 036539 444 QEIA 447 (749)
Q Consensus 444 ~~~~ 447 (749)
..++
T Consensus 159 ~da~ 162 (186)
T PF04413_consen 159 ADAE 162 (186)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8877
No 197
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=67.16 E-value=27 Score=34.17 Aligned_cols=59 Identities=20% Similarity=0.212 Sum_probs=35.8
Q ss_pred CCCceEEEEcCCCchHH-HHHHHH-c-C-CCcEEEEecCCcc-cccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEE
Q 036539 365 GGKPDLIIGNYSDGNLV-ASVMAS-K-L-GITQATIAHALEK-TKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFII 439 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lv-a~lla~-~-~-gvp~v~t~H~l~~-~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~II 439 (749)
..+||+|+|.++..+.+ ...+.+ . . ++|+++.+-++.. .. .| .-..+|..+
T Consensus 87 ~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H~------~W------------------~~~~~D~y~ 142 (169)
T PF06925_consen 87 EFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVHP------FW------------------IHPGVDRYF 142 (169)
T ss_pred hcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCCc------Ce------------------ecCCCCEEE
Confidence 35999999988876444 333333 2 3 4776655544311 00 11 235689999
Q ss_pred eCCHHHHh
Q 036539 440 ASTFQEIA 447 (749)
Q Consensus 440 t~S~~~~~ 447 (749)
+.|.+.++
T Consensus 143 Vase~~~~ 150 (169)
T PF06925_consen 143 VASEEVKE 150 (169)
T ss_pred ECCHHHHH
Confidence 99988776
No 198
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=66.40 E-value=6 Score=42.18 Aligned_cols=80 Identities=14% Similarity=0.086 Sum_probs=47.6
Q ss_pred CCceEEEEcCCC-chHHHHHHHHcCCCcEEEEecCCcccccC--CCcchhh---hcCcccccchhhhHHHHHhhhCCEEE
Q 036539 366 GKPDLIIGNYSD-GNLVASVMASKLGITQATIAHALEKTKYE--DSDVKWK---ELDPKYHFSCQFIADTIAMNATDFII 439 (749)
Q Consensus 366 ~~pDIIh~h~~~-~~lva~lla~~~gvp~v~t~H~l~~~k~~--~s~~~~~---~~~~~y~f~~~~~~e~~a~~~aD~II 439 (749)
.+.||.|+...- .+++|++++.+.|+|++.|-|+...-... -....|- ...+..........-+.++..||.|+
T Consensus 171 P~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~ 250 (268)
T PF11997_consen 171 PKADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRIT 250 (268)
T ss_pred CCCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeec
Confidence 466999977644 58999999999999999999997321100 0011111 00000000011123456799999999
Q ss_pred eCCHHH
Q 036539 440 ASTFQE 445 (749)
Q Consensus 440 t~S~~~ 445 (749)
+.....
T Consensus 251 ~l~~~n 256 (268)
T PF11997_consen 251 PLYEYN 256 (268)
T ss_pred ccchhh
Confidence 988643
No 199
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=64.35 E-value=22 Score=35.15 Aligned_cols=64 Identities=19% Similarity=0.201 Sum_probs=42.2
Q ss_pred CCCceEEEEcCCCchHHHHHHHHcC------CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEE
Q 036539 365 GGKPDLIIGNYSDGNLVASVMASKL------GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFI 438 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lva~lla~~~------gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~I 438 (749)
+.+||+|++|.+..+....++++.+ |.++|++-- ....+ ... ..-++...-||.+
T Consensus 90 r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES-~aRv~-------------~lS-----lTGklly~~aD~f 150 (170)
T PF08660_consen 90 RERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIES-FARVK-------------TLS-----LTGKLLYPFADRF 150 (170)
T ss_pred HhCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEe-eeecC-------------CCc-----hHHHHHHHhCCEE
Confidence 3489999999999887777777777 888776422 10000 000 1234566779999
Q ss_pred EeCCHHHHh
Q 036539 439 IASTFQEIA 447 (749)
Q Consensus 439 It~S~~~~~ 447 (749)
++--++.++
T Consensus 151 ~VQW~~l~~ 159 (170)
T PF08660_consen 151 IVQWEELAE 159 (170)
T ss_pred EEcCHHHHh
Confidence 988776665
No 200
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=63.09 E-value=1.2e+02 Score=32.95 Aligned_cols=105 Identities=13% Similarity=0.108 Sum_probs=58.2
Q ss_pred HHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCc--cccccCccceEEEEecCccCCccccccccccccccchHHHHHH
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQE--LEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQD 355 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~--~e~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~ 355 (749)
.|.+.|.++||.|- |+-+-+..|-..|....++ .......+|+.+-.+|.+...| -+..-+.+
T Consensus 70 ~L~~~l~~~G~rVa--VlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~srG~lG-------------GlS~at~~ 134 (323)
T COG1703 70 ALGRELRERGHRVA--VLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSPSRGTLG-------------GLSRATRE 134 (323)
T ss_pred HHHHHHHHCCcEEE--EEEECCCCCCCCccccccHhhHHhhccCCCeEEeecCCCccch-------------hhhHHHHH
Confidence 67788999999998 3333344444444444433 3334444577777777765433 12233334
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCC
Q 036539 356 ATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHAL 400 (749)
Q Consensus 356 ~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l 400 (749)
+...+.+ ..+|+|+....-.+-.=.-++....+-+++...+.
T Consensus 135 ~i~~ldA---aG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~ 176 (323)
T COG1703 135 AIKLLDA---AGYDVIIVETVGVGQSEVDIANMADTFLVVMIPGA 176 (323)
T ss_pred HHHHHHh---cCCCEEEEEecCCCcchhHHhhhcceEEEEecCCC
Confidence 4444433 38999998765543322233344455566666654
No 201
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=62.06 E-value=1.9e+02 Score=29.47 Aligned_cols=137 Identities=9% Similarity=0.018 Sum_probs=72.9
Q ss_pred HHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEE
Q 036539 551 TEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFV 630 (749)
Q Consensus 551 ieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV 630 (749)
...+..+.+. .+++.++..... +++.+++++ ++|.|... ... ...+.+ +++++
T Consensus 22 ~rk~~~Ll~~--ga~VtVvsp~~~-------------~~l~~l~~~----~~i~~~~~---~~~----~~dl~~-~~lVi 74 (205)
T TIGR01470 22 LRKARLLLKA--GAQLRVIAEELE-------------SELTLLAEQ----GGITWLAR---CFD----ADILEG-AFLVI 74 (205)
T ss_pred HHHHHHHHHC--CCEEEEEcCCCC-------------HHHHHHHHc----CCEEEEeC---CCC----HHHhCC-cEEEE
Confidence 3334444432 567777765543 344444433 46888751 112 223453 66655
Q ss_pred ECCCCC-CCcHHHHHHHHcCCcEEEcCccccccc-----cccCceEEEE-CCCCHHHHHHHHHHHHHHhcC-CHHHHHHH
Q 036539 631 QPALYE-AFGLTVIEAMNCGLPTFATNQGGPAEI-----IVDGVSGFHI-DPYNGDESSDKIADFFEACKV-DPTYWNKF 702 (749)
Q Consensus 631 ~PS~~E-~fGLtvlEAMa~GlPVVat~~GG~~Ei-----I~dg~~G~lv-~p~d~e~lA~aI~~~l~~l~~-dp~~~~~m 702 (749)
...-.+ ----..-+|-..|+||-+.+.....++ +..|.--+-+ ..+..-.+|..|.+-++.++. +-..+-++
T Consensus 75 ~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~iaisT~G~sP~la~~lr~~ie~~l~~~~~~~~~~ 154 (205)
T TIGR01470 75 AATDDEELNRRVAHAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVAISSGGAAPVLARLLRERIETLLPPSLGDLATL 154 (205)
T ss_pred ECCCCHHHHHHHHHHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEEEECCCCCcHHHHHHHHHHHHhcchhHHHHHHH
Confidence 443322 233345677788999977765554443 3343322222 223345778888877777664 23344455
Q ss_pred HHHHHHHHHHhC
Q 036539 703 STEGLKRINECY 714 (749)
Q Consensus 703 s~~a~~~v~~~y 714 (749)
....|..+.+..
T Consensus 155 ~~~~R~~~k~~~ 166 (205)
T TIGR01470 155 AATWRDAVKKRL 166 (205)
T ss_pred HHHHHHHHHhhC
Confidence 566666665544
No 202
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=60.55 E-value=1.3e+02 Score=29.81 Aligned_cols=43 Identities=16% Similarity=0.415 Sum_probs=29.0
Q ss_pred CCceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCC
Q 036539 235 LPILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLI 301 (749)
Q Consensus 235 ~pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~ 301 (749)
++|.|||.+- |-|| . |-...++ .++..|...|+.|. -++|...
T Consensus 2 ~~~~mki~IT---G~PG---------v-GKtTl~~--------ki~e~L~~~g~kvg---Gf~t~EV 44 (179)
T COG1618 2 IKMAMKIFIT---GRPG---------V-GKTTLVL--------KIAEKLREKGYKVG---GFITPEV 44 (179)
T ss_pred CCcceEEEEe---CCCC---------c-cHHHHHH--------HHHHHHHhcCceee---eEEeeee
Confidence 5789999774 4332 2 4444555 78888999999986 3556553
No 203
>COG1647 Esterase/lipase [General function prediction only]
Probab=60.49 E-value=28 Score=36.05 Aligned_cols=44 Identities=16% Similarity=0.114 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEe
Q 036539 352 FAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIA 397 (749)
Q Consensus 352 f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~ 397 (749)
.+.+..+.+.. .+-.-|..+--+.|++++..++....++-++..
T Consensus 71 ~v~d~Y~~L~~--~gy~eI~v~GlSmGGv~alkla~~~p~K~iv~m 114 (243)
T COG1647 71 DVEDGYRDLKE--AGYDEIAVVGLSMGGVFALKLAYHYPPKKIVPM 114 (243)
T ss_pred HHHHHHHHHHH--cCCCeEEEEeecchhHHHHHHHhhCCccceeee
Confidence 33344444443 345557778889999999999998776644443
No 204
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=59.80 E-value=2.1e+02 Score=32.74 Aligned_cols=139 Identities=14% Similarity=0.148 Sum_probs=72.8
Q ss_pred CcEEEEEecccC-----CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcC--CCCcEE
Q 036539 532 KPIIFSMARLDV-----VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQ--LKGQMR 604 (749)
Q Consensus 532 k~vIl~vGRL~~-----~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~--L~~~V~ 604 (749)
..++++.|.... .+-...++.+++++ +++.|+.+=..... .. +.+... ..++|.
T Consensus 278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~----~~~~FiW~~~~~~~------------~~---~~~~~~~~~~~nV~ 338 (496)
T KOG1192|consen 278 SVVYISFGSMVNSADLPEEQKKELAKALESL----QGVTFLWKYRPDDS------------IY---FPEGLPNRGRGNVV 338 (496)
T ss_pred CeEEEECCcccccccCCHHHHHHHHHHHHhC----CCceEEEEecCCcc------------hh---hhhcCCCCCcCceE
Confidence 456677777652 34445556666554 35666655544330 00 222221 135788
Q ss_pred EecCccCcCChHHHHHHHHc-cCcEEEECCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccc-ccCceEEEECCCCH
Q 036539 605 WIAAQSDRLRNGELYRCIAD-TKGAFVQPALYEAFGLTVIEAMNCGLPTFAT----NQGGPAEII-VDGVSGFHIDPYNG 678 (749)
Q Consensus 605 flG~~~~~~~~~el~~~la~-aadvfV~PS~~E~fGLtvlEAMa~GlPVVat----~~GG~~EiI-~dg~~G~lv~p~d~ 678 (749)
..+ +++..++. ++. +.++||.= -|++ +++||..+|+|+|+. |..-.+..+ .++..|.+. ..|.
T Consensus 339 ~~~----W~PQ~~ll--l~H~~v~~FvTH---gG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~-~~~~ 407 (496)
T KOG1192|consen 339 LSK----WAPQNDLL--LDHPAVGGFVTH---GGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLD-KRDL 407 (496)
T ss_pred Eec----CCCcHHHh--cCCCcCcEEEEC---Cccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEe-hhhc
Confidence 877 77777765 221 13444433 3344 459999999999964 333334444 445555544 3322
Q ss_pred --HHHHHHHHHHHHHhcCCHHHHHHHHH
Q 036539 679 --DESSDKIADFFEACKVDPTYWNKFST 704 (749)
Q Consensus 679 --e~lA~aI~~~l~~l~~dp~~~~~ms~ 704 (749)
..+.+++..+ ..++++.+...+
T Consensus 408 ~~~~~~~~~~~i----l~~~~y~~~~~~ 431 (496)
T KOG1192|consen 408 VSEELLEAIKEI----LENEEYKEAAKR 431 (496)
T ss_pred CcHHHHHHHHHH----HcChHHHHHHHH
Confidence 1245555443 467766554433
No 205
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=56.71 E-value=27 Score=42.01 Aligned_cols=44 Identities=36% Similarity=0.539 Sum_probs=28.9
Q ss_pred CCceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCC
Q 036539 235 LPILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLI 301 (749)
Q Consensus 235 ~pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~ 301 (749)
-|..+||+++|||- . .+++ ..|| ...+|+++||+|+ |+++|...
T Consensus 366 ~~~~~rvLv~spHP--D-Devi---~~GG---------------Tlarl~~~G~~V~--vv~~TsG~ 409 (652)
T PRK02122 366 LPYPKRVIIFSPHP--D-DDVI---SMGG---------------TFRRLVEQGHDVH--VAYQTSGN 409 (652)
T ss_pred ccCCceEEEEEeCC--C-chHh---hhHH---------------HHHHHHHCCCcEE--EEEecCCc
Confidence 45679999999994 1 2233 2355 2235899999998 55566553
No 206
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=56.09 E-value=1.4e+02 Score=31.49 Aligned_cols=38 Identities=18% Similarity=0.248 Sum_probs=26.7
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPD 303 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~ 303 (749)
|||++....|+-. ..+. .|.+.|++.| +|. |+++....
T Consensus 1 M~ILltNDDGi~a--------------~Gi~--------aL~~~l~~~g-~V~----VvAP~~~~ 38 (244)
T TIGR00087 1 MKILLTNDDGIHS--------------PGIR--------ALYQALKELG-EVT----VVAPARQR 38 (244)
T ss_pred CeEEEECCCCCCC--------------HhHH--------HHHHHHHhCC-CEE----EEeCCCCc
Confidence 6999998888732 2345 5566677888 888 88877543
No 207
>PLN02534 UDP-glycosyltransferase
Probab=55.19 E-value=3.8e+02 Score=31.30 Aligned_cols=45 Identities=11% Similarity=0.039 Sum_probs=30.6
Q ss_pred CcEEEecCccCcCChHHHHHHHHccCcE--EEECCCCCCCcHHHHHHHHcCCcEEEcCc
Q 036539 601 GQMRWIAAQSDRLRNGELYRCIADTKGA--FVQPALYEAFGLTVIEAMNCGLPTFATNQ 657 (749)
Q Consensus 601 ~~V~flG~~~~~~~~~el~~~la~aadv--fV~PS~~E~fGLtvlEAMa~GlPVVat~~ 657 (749)
.++.+.| +++..++.. ..++ ||.- +=.++++||+.+|+|+|+-..
T Consensus 344 ~g~~v~~----w~pq~~iL~----h~~v~~fvtH----~G~ns~~ea~~~GvP~v~~P~ 390 (491)
T PLN02534 344 RGLLIKG----WAPQVLILS----HPAIGGFLTH----CGWNSTIEGICSGVPMITWPL 390 (491)
T ss_pred CCeeccC----CCCHHHHhc----CCccceEEec----CccHHHHHHHHcCCCEEeccc
Confidence 4566666 777766555 3444 5544 224589999999999999644
No 208
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=54.43 E-value=95 Score=35.87 Aligned_cols=97 Identities=7% Similarity=0.057 Sum_probs=62.3
Q ss_pred HHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC-cEEEcCc--cccccccccCceEEEECCCCHHHHHHHHHHHHHHh
Q 036539 616 GELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL-PTFATNQ--GGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEAC 692 (749)
Q Consensus 616 ~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~Gl-PVVat~~--GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l 692 (749)
....+.+++ +-..++|+-.+...-.++||+.+|| |||.++. ....+++.-..-++.++ .+++-+.|.+.+..
T Consensus 335 ~~y~~~m~~-S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~---~~~v~~~~~~iL~~- 409 (464)
T KOG1021|consen 335 LNYMEGMQD-SKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP---EKDVPELIKNILLS- 409 (464)
T ss_pred chHHHHhhc-CeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE---HHHhhhHHHHHHHh-
Confidence 456777885 8888999999988889999999997 9999864 23445554444455554 23333334444422
Q ss_pred cCCHHHHHHHHHHHHHHHHHhCCHHH
Q 036539 693 KVDPTYWNKFSTEGLKRINECYTWKI 718 (749)
Q Consensus 693 ~~dp~~~~~ms~~a~~~v~~~ysw~~ 718 (749)
.......+|.++-...+...|.|..
T Consensus 410 -i~~~~~~~m~~~v~~~v~r~~~~~~ 434 (464)
T KOG1021|consen 410 -IPEEEVLRMRENVIRLVPRHFLKKP 434 (464)
T ss_pred -cCHHHHHHHHHHHHHHHHhhEEeCC
Confidence 2334446666666555666666664
No 209
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=53.75 E-value=1.9e+02 Score=30.77 Aligned_cols=41 Identities=24% Similarity=0.348 Sum_probs=28.4
Q ss_pred CceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCC
Q 036539 236 PILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPD 303 (749)
Q Consensus 236 pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~ 303 (749)
.|.|||++....|+..+ | +. .|++.|++.| +|. |+++....
T Consensus 3 ~~~M~ILltNDDGi~a~----------G----i~--------aL~~~l~~~g-~V~----VvAP~~~~ 43 (257)
T PRK13932 3 DKKPHILVCNDDGIEGE----------G----IH--------VLAASMKKIG-RVT----VVAPAEPH 43 (257)
T ss_pred CCCCEEEEECCCCCCCH----------H----HH--------HHHHHHHhCC-CEE----EEcCCCCC
Confidence 35689999999988432 3 44 4556677778 788 88877433
No 210
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=52.90 E-value=12 Score=37.56 Aligned_cols=33 Identities=18% Similarity=0.351 Sum_probs=25.9
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
|||++|+..|.-| . ++++...++||+|+ -++|.
T Consensus 1 mKIaiIgAsG~~G--------------s-----------~i~~EA~~RGHeVT----AivRn 33 (211)
T COG2910 1 MKIAIIGASGKAG--------------S-----------RILKEALKRGHEVT----AIVRN 33 (211)
T ss_pred CeEEEEecCchhH--------------H-----------HHHHHHHhCCCeeE----EEEeC
Confidence 7999998777632 1 66677899999999 77776
No 211
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=50.90 E-value=1.2e+02 Score=31.70 Aligned_cols=35 Identities=14% Similarity=0.100 Sum_probs=21.0
Q ss_pred CCCceEEEEc--CCCchHHHHHHHHcCCCcEEEEecC
Q 036539 365 GGKPDLIIGN--YSDGNLVASVMASKLGITQATIAHA 399 (749)
Q Consensus 365 ~~~pDIIh~h--~~~~~lva~lla~~~gvp~v~t~H~ 399 (749)
...+|.|... ...+..+...+-+.+|+|++..-..
T Consensus 179 ~~~aDAifisCTnLrt~~vi~~lE~~lGkPVlsSNqa 215 (239)
T TIGR02990 179 DPDADALFLSCTALRAATCAQRIEQAIGKPVVTSNQA 215 (239)
T ss_pred CCCCCEEEEeCCCchhHHHHHHHHHHHCCCEEEHHHH
Confidence 3467876633 2333344445556799999876554
No 212
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=49.80 E-value=62 Score=36.56 Aligned_cols=62 Identities=11% Similarity=0.004 Sum_probs=45.4
Q ss_pred cCceEEEECC-CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhH
Q 036539 666 DGVSGFHIDP-YNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMYS 731 (749)
Q Consensus 666 dg~~G~lv~p-~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~~ 731 (749)
..++=+-|.. +|..++.++| +.+.+|++..++|+++|.+.+.+..+.+.+..=+..+...|+
T Consensus 257 P~vHYVPV~~~~d~sdL~~~v----~w~~~~~~~A~~IA~~g~~f~~~~L~~~~~~~Y~~~LL~eYa 319 (395)
T PF05686_consen 257 PWVHYVPVKRDDDLSDLEEKV----EWLNAHDDEAQRIAENGQRFAREYLTMEDVYCYWRRLLLEYA 319 (395)
T ss_pred ccccEEEeccccchhhHHHHh----hhcccChHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 3344444544 3667777777 556789999999999999999888888877776666666553
No 213
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=48.31 E-value=54 Score=34.75 Aligned_cols=83 Identities=13% Similarity=-0.019 Sum_probs=44.7
Q ss_pred HHHHHcCCC-CcE-EEecCccCcCChHHHHHHHHc-cCcEEEECCCCC--CCcHHHHHHHHcCCcEEEcCcccccccccc
Q 036539 592 ALMEKYQLK-GQM-RWIAAQSDRLRNGELYRCIAD-TKGAFVQPALYE--AFGLTVIEAMNCGLPTFATNQGGPAEIIVD 666 (749)
Q Consensus 592 ~li~~~~L~-~~V-~flG~~~~~~~~~el~~~la~-aadvfV~PS~~E--~fGLtvlEAMa~GlPVVat~~GG~~EiI~d 666 (749)
+.+.++|++ .++ -+-| +.+.+.=..++.+ .+|++|.=-.-+ ++--++--|+.+|+|||.=+.+-...
T Consensus 165 ~~~~~~G~~~~~iia~~g----Pfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~---- 236 (256)
T TIGR00715 165 AQALKLGFPSDRIIAMRG----PFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP---- 236 (256)
T ss_pred HHHHHcCCChhcEEEEeC----CCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC----
Confidence 356777774 233 3333 3333322333331 256666543333 45668888999999999977664211
Q ss_pred CceEEEECCCCHHHHHHHHH
Q 036539 667 GVSGFHIDPYNGDESSDKIA 686 (749)
Q Consensus 667 g~~G~lv~p~d~e~lA~aI~ 686 (749)
+ +-.+ .+.+++.+.+.
T Consensus 237 ~--~~~~--~~~~el~~~l~ 252 (256)
T TIGR00715 237 G--VAIF--DDISQLNQFVA 252 (256)
T ss_pred C--CccC--CCHHHHHHHHH
Confidence 0 0122 36677666654
No 214
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=45.94 E-value=2.5e+02 Score=33.13 Aligned_cols=156 Identities=13% Similarity=0.111 Sum_probs=99.2
Q ss_pred CCcEEEEEecccC-CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCc
Q 036539 531 KKPIIFSMARLDV-VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQ 609 (749)
Q Consensus 531 ~k~vIl~vGRL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~ 609 (749)
.++.-+..|.-.. .||-+..++.+.+.- .++-.|.+.... ...++.-|.=+|
T Consensus 276 r~~~AlVyGK~~~~w~~k~~~l~~l~~~~----eih~tV~~~~~~---------------------~~~~P~~V~NHG-- 328 (559)
T PF15024_consen 276 RKNQALVYGKERYMWKGKEKYLDVLHKYM----EIHGTVYDEPQR---------------------PPNVPSFVKNHG-- 328 (559)
T ss_pred ccceeEEEccchhhhcCcHHHHHHHHhhc----EEEEEeccCCCC---------------------CcccchhhhhcC--
Confidence 3445555565443 677788888876643 344444333321 112344455667
Q ss_pred cCcCChHHHHHHHHccCcEEEECCC-CCCCcHHHHHHHHcCCcEEEcCcccccc-------------------------c
Q 036539 610 SDRLRNGELYRCIADTKGAFVQPAL-YEAFGLTVIEAMNCGLPTFATNQGGPAE-------------------------I 663 (749)
Q Consensus 610 ~~~~~~~el~~~la~aadvfV~PS~-~E~fGLtvlEAMa~GlPVVat~~GG~~E-------------------------i 663 (749)
.++..|+..++.. +-|||-.-. +| |=+-+||+|.|+|.|-.....+.. .
T Consensus 329 --~l~~~ef~~lL~~-akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~ 403 (559)
T PF15024_consen 329 --ILSGDEFQQLLRK-AKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEF 403 (559)
T ss_pred --cCCHHHHHHHHHh-hhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhh
Confidence 6778899999996 889986543 56 347899999999998876543321 1
Q ss_pred cccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhHh
Q 036539 664 IVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMYSF 732 (749)
Q Consensus 664 I~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~~~ 732 (749)
|. .-.-+.|+-+|.+++-++|.+++.. ..+ -++--.||-+.|.+|+-.+++..-|
T Consensus 404 iG-~PhVytVd~~n~~~v~~Avk~il~~-~v~------------Py~P~efT~egmLeRv~~~ie~q~f 458 (559)
T PF15024_consen 404 IG-EPHVYTVDINNSTEVEAAVKAILAT-PVE------------PYLPYEFTCEGMLERVNALIEKQDF 458 (559)
T ss_pred CC-CCeEEEEcCCCHHHHHHHHHHHHhc-CCC------------CcCCcccCHHHHHHHHHHHHHhhhh
Confidence 11 1246788999999999999877632 111 2233568888888888777766544
No 215
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=43.67 E-value=1.1e+02 Score=32.46 Aligned_cols=34 Identities=24% Similarity=0.220 Sum_probs=26.4
Q ss_pred CceEEEEcC--CC--chHHHHHHHHcCCCcEEEEecCC
Q 036539 367 KPDLIIGNY--SD--GNLVASVMASKLGITQATIAHAL 400 (749)
Q Consensus 367 ~pDIIh~h~--~~--~~lva~lla~~~gvp~v~t~H~l 400 (749)
.||+|.|-. .+ .+.++..+|..+|+|++..+-.+
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~l 149 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSKI 149 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEEE
Confidence 599999632 33 47899999999999988766654
No 216
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=43.37 E-value=1.2e+02 Score=32.04 Aligned_cols=48 Identities=10% Similarity=0.093 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhH
Q 036539 680 ESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMYS 731 (749)
Q Consensus 680 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~~ 731 (749)
++.++| +-+.++++..++|+++|++.+.+..+.+.+..-+..++..|+
T Consensus 203 ~l~~~i----~~~~~~~~~a~~Ia~~~~~~~~~~L~~~~~~~Y~~~ll~eya 250 (256)
T smart00672 203 ELKEAV----DWGNEHDKKAQEIGKRGSEFIQQNLSMEDVYDYMFHLLQEYA 250 (256)
T ss_pred hHHHHH----HHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 477777 445589999999999999999888888888777777766654
No 217
>PRK06988 putative formyltransferase; Provisional
Probab=42.57 E-value=1e+02 Score=33.60 Aligned_cols=19 Identities=26% Similarity=0.375 Sum_probs=12.2
Q ss_pred HHHHHHHHcCCcccceEEEEeC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTR 299 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~ 299 (749)
...+.|.++|++|. .|+|.
T Consensus 16 ~~L~~L~~~~~~i~---~Vvt~ 34 (312)
T PRK06988 16 RCLQVLLARGVDVA---LVVTH 34 (312)
T ss_pred HHHHHHHhCCCCEE---EEEcC
Confidence 34456777899875 45664
No 218
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=40.83 E-value=1.7e+02 Score=30.04 Aligned_cols=113 Identities=20% Similarity=0.141 Sum_probs=66.1
Q ss_pred cCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC-CcEEEecCccCcCChHHHHH
Q 036539 542 DVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK-GQMRWIAAQSDRLRNGELYR 620 (749)
Q Consensus 542 ~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~-~~V~flG~~~~~~~~~el~~ 620 (749)
+-.|=+..|..|+.-+... ..-++++||..+. ..+.+.+.++..|-. -+=+|+|- -..+..+..
T Consensus 47 dL~kT~~~L~~A~~~i~~~-~~~~ILfVgTk~~-----------~~~~v~k~A~~~g~~~v~~RWlgG---~LTN~~~~~ 111 (204)
T PRK04020 47 DVRKTDERIRIAAKFLSRY-EPEKILVVSSRQY-----------GQKPVQKFAEVVGAKAITGRFIPG---TLTNPSLKG 111 (204)
T ss_pred cHHHHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-----------HHHHHHHHHHHhCCeeecCccCCC---cCcCcchhc
Confidence 4445566677777666654 3458899998865 134456666665432 11268872 222222323
Q ss_pred HHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEE-cCccccccccccCceEEEECCCC
Q 036539 621 CIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFA-TNQGGPAEIIVDGVSGFHIDPYN 677 (749)
Q Consensus 621 ~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVa-t~~GG~~EiI~dg~~G~lv~p~d 677 (749)
++- -|+.++....+ =..++.||.-.|.|||| .|....++.| .+.+|.+|
T Consensus 112 ~~~--Pdliiv~dp~~-~~~AI~EA~kl~IP~IaivDTn~dp~~V-----dypIP~Nd 161 (204)
T PRK04020 112 YIE--PDVVVVTDPRG-DAQAVKEAIEVGIPVVALCDTDNLTSNV-----DLVIPTNN 161 (204)
T ss_pred cCC--CCEEEEECCcc-cHHHHHHHHHhCCCEEEEEeCCCCcccC-----ceeECCCC
Confidence 322 34544443322 26789999999999999 4666666665 35676655
No 219
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=40.27 E-value=2.1e+02 Score=27.40 Aligned_cols=118 Identities=17% Similarity=0.175 Sum_probs=65.5
Q ss_pred CCcchHHHhhhcCCceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCC
Q 036539 223 PDPLHMEKFLSSLPILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIP 302 (749)
Q Consensus 223 p~~~~~~~~~~~~pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p 302 (749)
|+..++..-|.+ ..+|++|..+.-|. +... ..++.|.++||+|. -+-+...
T Consensus 4 ~~~~~i~~iL~~---~K~IAvVG~S~~P~--------------r~sy--------~V~kyL~~~GY~Vi----PVNP~~~ 54 (140)
T COG1832 4 PEEEDIAEILKS---AKTIAVVGASDKPD--------------RPSY--------RVAKYLQQKGYRVI----PVNPKLA 54 (140)
T ss_pred ccHHHHHHHHHh---CceEEEEecCCCCC--------------ccHH--------HHHHHHHHCCCEEE----eeCcccc
Confidence 444444433332 46899998766542 1122 56778999999987 4544322
Q ss_pred --CCCCCccCCccccccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchH
Q 036539 303 --DARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNL 380 (749)
Q Consensus 303 --~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~l 380 (749)
.-.|..+-..+..++. .+.++-+ |++ ..++...+++..+. .+.++..+...-+.
T Consensus 55 ~~eiLG~k~y~sL~dIpe--~IDiVdv-FR~------------------~e~~~~i~~eal~~---~~kv~W~QlGi~n~ 110 (140)
T COG1832 55 GEEILGEKVYPSLADIPE--PIDIVDV-FRR------------------SEAAPEVAREALEK---GAKVVWLQLGIRNE 110 (140)
T ss_pred hHHhcCchhhhcHHhCCC--CCcEEEE-ecC------------------hhhhHHHHHHHHhh---CCCeEEEecCcCCH
Confidence 2234444444444442 3333333 221 23344445554443 58888888777777
Q ss_pred HHHHHHHcCCCcE
Q 036539 381 VASVMASKLGITQ 393 (749)
Q Consensus 381 va~lla~~~gvp~ 393 (749)
-|.-.++..|+.+
T Consensus 111 ea~~~~~~aG~~v 123 (140)
T COG1832 111 EAAEKARDAGLDV 123 (140)
T ss_pred HHHHHHHHhCcHH
Confidence 7777777777644
No 220
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=39.49 E-value=2.8e+02 Score=29.60 Aligned_cols=38 Identities=18% Similarity=0.325 Sum_probs=26.0
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPD 303 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~ 303 (749)
|||++....|+-.+ | +. .|++.|++.| +|+ |+++....
T Consensus 1 M~ILlTNDDGi~ap----------G----i~--------aL~~al~~~g-~V~----VvAP~~eq 38 (266)
T PRK13934 1 MKILVTNDDGVHSP----------G----LR--------LLYEFVSPLG-EVD----VVAPETPK 38 (266)
T ss_pred CeEEEEcCCCCCCH----------H----HH--------HHHHHHHhCC-cEE----EEccCCCC
Confidence 68999998887432 3 44 4555667777 788 88877433
No 221
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=39.18 E-value=3.4e+02 Score=28.79 Aligned_cols=38 Identities=16% Similarity=0.166 Sum_probs=25.6
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPD 303 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~ 303 (749)
|||++....|+..+ | +. .|++.|++ +++|. |+++....
T Consensus 1 M~ILvtNDDGi~ap----------G----l~--------aL~~~l~~-~~~V~----VvAP~~~~ 38 (253)
T PRK13933 1 MNILLTNDDGINAE----------G----IN--------TLAELLSK-YHEVI----IVAPENQR 38 (253)
T ss_pred CeEEEEcCCCCCCh----------h----HH--------HHHHHHHh-CCcEE----EEccCCCC
Confidence 69999999998432 3 44 44455654 57898 88877433
No 222
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=39.08 E-value=1.6e+02 Score=32.68 Aligned_cols=33 Identities=24% Similarity=0.165 Sum_probs=24.3
Q ss_pred CCceEEEEcCCCchHHHHHHHHcCCCcEEEEec
Q 036539 366 GKPDLIIGNYSDGNLVASVMASKLGITQATIAH 398 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H 398 (749)
+-.-+..+-.+.|+..|.+.+.....|+....+
T Consensus 173 G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ 205 (348)
T PF09752_consen 173 GYGPLGLTGISMGGHMAALAASNWPRPVALVPC 205 (348)
T ss_pred CCCceEEEEechhHhhHHhhhhcCCCceeEEEe
Confidence 444577777889989999888877777665444
No 223
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=38.93 E-value=6.3e+02 Score=28.69 Aligned_cols=176 Identities=10% Similarity=0.072 Sum_probs=104.6
Q ss_pred EEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEec-CccCc
Q 036539 534 IIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIA-AQSDR 612 (749)
Q Consensus 534 vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG-~~~~~ 612 (749)
.|=|.|..+..+-.....+...++++ +++.++||-..-. -..|.+-.++|.+..+..+ +++|.|.= ... .
T Consensus 156 ~iP~ygsyte~dpv~ia~egv~~fKk--e~fdvIIvDTSGR-----h~qe~sLfeEM~~v~~ai~-Pd~vi~VmDasi-G 226 (483)
T KOG0780|consen 156 RVPFYGSYTEADPVKIASEGVDRFKK--ENFDVIIVDTSGR-----HKQEASLFEEMKQVSKAIK-PDEIIFVMDASI-G 226 (483)
T ss_pred CCeeEecccccchHHHHHHHHHHHHh--cCCcEEEEeCCCc-----hhhhHHHHHHHHHHHhhcC-CCeEEEEEeccc-c
Confidence 34566788888889999999999987 4688888876543 2344556777888777776 46676653 111 1
Q ss_pred CChHHHHHHHHccCcE--EEECCC----CCCCcHHHHHHHHcCCcEEEcCccccccccccC----ceEEEECCCCHHHHH
Q 036539 613 LRNGELYRCIADTKGA--FVQPAL----YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDG----VSGFHIDPYNGDESS 682 (749)
Q Consensus 613 ~~~~el~~~la~aadv--fV~PS~----~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg----~~G~lv~p~d~e~lA 682 (749)
...++..+.+..+.|+ .+++-. --|-.++.++ +.++||+--..|-.-|-++.- -.+-+.--+|.+.+.
T Consensus 227 Qaae~Qa~aFk~~vdvg~vIlTKlDGhakGGgAlSaVa--aTksPIiFIGtGEhmdDlE~F~pk~FvsrlLGmGDi~glv 304 (483)
T KOG0780|consen 227 QAAEAQARAFKETVDVGAVILTKLDGHAKGGGALSAVA--ATKSPIIFIGTGEHMDDLEPFDPKPFVSRLLGMGDIEGLV 304 (483)
T ss_pred HhHHHHHHHHHHhhccceEEEEecccCCCCCceeeehh--hhCCCEEEEecCccccccCCCChHHHHHHHhccccHHHHH
Confidence 2344555555555555 334432 1223444554 468898876666443333221 011223345777777
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 683 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+++.+.- ..+++++.+++. +-+||...+.+++-++.+.
T Consensus 305 ek~~ev~--~~d~~el~~kl~-------~gkFtlrd~y~Qfq~imkm 342 (483)
T KOG0780|consen 305 EKVQEVG--KDDAKELVEKLK-------QGKFTLRDFYDQFQNIMKM 342 (483)
T ss_pred HHHHHHh--hhhHHHHHHHHH-------hCCccHHHHHHHHHHHHhh
Confidence 7776543 223334433331 3479999999998887765
No 224
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=37.31 E-value=64 Score=31.69 Aligned_cols=40 Identities=23% Similarity=0.455 Sum_probs=0.0
Q ss_pred HHHHHHHHccCcEEEECCC----CCCCcHH--HHHHHHcCCcEEEc
Q 036539 616 GELYRCIADTKGAFVQPAL----YEAFGLT--VIEAMNCGLPTFAT 655 (749)
Q Consensus 616 ~el~~~la~aadvfV~PS~----~E~fGLt--vlEAMa~GlPVVat 655 (749)
..+.+.+++.+|++|+--. -|+-|+. +.+|++.|+||+++
T Consensus 84 ~~l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~ 129 (159)
T PF10649_consen 84 AALRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTA 129 (159)
T ss_pred HHHHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEE
No 225
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=35.56 E-value=4.2e+02 Score=28.06 Aligned_cols=35 Identities=23% Similarity=0.459 Sum_probs=21.6
Q ss_pred cCCCceEEEE--cCCC---------chHHHHHHHHcCCCcEEEEec
Q 036539 364 LGGKPDLIIG--NYSD---------GNLVASVMASKLGITQATIAH 398 (749)
Q Consensus 364 l~~~pDIIh~--h~~~---------~~lva~lla~~~gvp~v~t~H 398 (749)
+..+||+|.+ |... +-..|+.-+...|+|-+..-.
T Consensus 83 ~~~~pDLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 128 (253)
T PRK13935 83 MDKKVDLVISGINRGPNLGTDVLYSGTVSGALEGAMMGVPSIAISS 128 (253)
T ss_pred ccCCCCEEEeCCccCCCCCcCCcccHhHHHHHHHHhcCCCeEEEEc
Confidence 3568999993 2211 224455666678999876544
No 226
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=34.91 E-value=4.7e+02 Score=26.01 Aligned_cols=110 Identities=11% Similarity=0.130 Sum_probs=64.9
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECCCCCC----
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPALYEA---- 637 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS~~E~---- 637 (749)
+.+++|+.+.+. ....+....+..+ .+...+. ..+..+....+. ...|++++-....+
T Consensus 3 ~~~Ilivdd~~~-----------~~~~l~~~L~~~~---~~~~v~~---~~~~~~~~~~~~~~~~DlvllD~~l~~~~~~ 65 (216)
T PRK10840 3 NMNVIIADDHPI-----------VLFGIRKSLEQIE---WVNVVGE---FEDSTALINNLPKLDAHVLITDLSMPGDKYG 65 (216)
T ss_pred ceEEEEECCcHH-----------HHHHHHHHHhcCC---CCEEEEE---ECCHHHHHHHHHhCCCCEEEEeCcCCCCCCC
Confidence 357777776654 2344555554432 2222221 112344555543 23688877543332
Q ss_pred CcHHHHHHHH---cCCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 638 FGLTVIEAMN---CGLPTFA-TNQGGP---AEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 638 fGLtvlEAMa---~GlPVVa-t~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
-|+.+++.+. .++|+|+ |..... .+.+..|..||+..|.+++++.++|....
T Consensus 66 ~g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l~~ai~~v~ 124 (216)
T PRK10840 66 DGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 (216)
T ss_pred CHHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHHH
Confidence 5777777764 3567776 444332 34467789999999999999999987654
No 227
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=34.52 E-value=3.1e+02 Score=29.06 Aligned_cols=38 Identities=18% Similarity=0.317 Sum_probs=26.7
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPD 303 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~ 303 (749)
|||++-...|+..+ | +. .|++.|+ .+++|+ |+++....
T Consensus 1 mrILlTNDDGi~a~----------G----i~--------aL~~al~-~~~dV~----VVAP~~~q 38 (252)
T COG0496 1 MRILLTNDDGIHAP----------G----IR--------ALARALR-EGADVT----VVAPDREQ 38 (252)
T ss_pred CeEEEecCCccCCH----------H----HH--------HHHHHHh-hCCCEE----EEccCCCC
Confidence 79999988887543 3 33 4455566 889999 99987543
No 228
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=33.79 E-value=3.7e+02 Score=24.59 Aligned_cols=89 Identities=16% Similarity=0.114 Sum_probs=42.1
Q ss_pred HHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCccccccccccccccchHHHHHHHH
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDAT 357 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~ 357 (749)
.+.+.|+++|++|. .+.+....-.|..|...+...++....-++-+| ......+.
T Consensus 18 ~v~~~l~~~G~~v~----~Vnp~~~~i~G~~~y~sl~e~p~~iDlavv~~~---------------------~~~~~~~v 72 (116)
T PF13380_consen 18 RVLRNLKAAGYEVY----PVNPKGGEILGIKCYPSLAEIPEPIDLAVVCVP---------------------PDKVPEIV 72 (116)
T ss_dssp HHHHHHHHTT-EEE----EESTTCSEETTEE-BSSGGGCSST-SEEEE-S----------------------HHHHHHHH
T ss_pred HHHHHHHhCCCEEE----EECCCceEECcEEeeccccCCCCCCCEEEEEcC---------------------HHHHHHHH
Confidence 56667888999987 666654443444444444433332233333333 12233444
Q ss_pred HHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEE
Q 036539 358 TMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQA 394 (749)
Q Consensus 358 ~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v 394 (749)
+++.+. ...-+..+......-+.-+++..|++++
T Consensus 73 ~~~~~~---g~~~v~~~~g~~~~~~~~~a~~~gi~vi 106 (116)
T PF13380_consen 73 DEAAAL---GVKAVWLQPGAESEELIEAAREAGIRVI 106 (116)
T ss_dssp HHHHHH---T-SEEEE-TTS--HHHHHHHHHTT-EEE
T ss_pred HHHHHc---CCCEEEEEcchHHHHHHHHHHHcCCEEE
Confidence 555443 3445555555444555566677787754
No 229
>KOG0832 consensus Mitochondrial/chloroplast ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=33.77 E-value=5.5e+02 Score=26.88 Aligned_cols=46 Identities=17% Similarity=0.293 Sum_probs=34.8
Q ss_pred CcEEEECCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCC
Q 036539 626 KGAFVQPALYEAFGLTVIEAMNCGLPTFAT-NQGGPAEIIVDGVSGFHIDPYN 677 (749)
Q Consensus 626 advfV~PS~~E~fGLtvlEAMa~GlPVVat-~~GG~~EiI~dg~~G~lv~p~d 677 (749)
.|++|.-...|... +++||.-++.|+|+- |....++.|+ +.++.+|
T Consensus 174 ~D~vvvln~~e~~s-AilEA~K~~IPTIgIVDtN~~P~liT-----YpVPaND 220 (251)
T KOG0832|consen 174 PDLVVVLNPEENHS-AILEAAKMAIPTIGIVDTNCNPELIT-----YPVPAND 220 (251)
T ss_pred cceeEecCcccccH-HHHHHHHhCCCeEEEecCCCCcccee-----eccCCCC
Confidence 37888888878765 899999999999994 5555666663 4566554
No 230
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=33.31 E-value=1.2e+02 Score=31.32 Aligned_cols=34 Identities=21% Similarity=0.350 Sum_probs=21.2
Q ss_pred CCceEEEEcCCC--chHHHHHHHHc-CCCcEE-EEecC
Q 036539 366 GKPDLIIGNYSD--GNLVASVMASK-LGITQA-TIAHA 399 (749)
Q Consensus 366 ~~pDIIh~h~~~--~~lva~lla~~-~gvp~v-~t~H~ 399 (749)
...|++.+-... .|.++..++++ +|+|.+ ..+++
T Consensus 65 ~~aD~vva~t~~d~~N~i~~~la~~~~gv~~viar~~~ 102 (225)
T COG0569 65 DDADAVVAATGNDEVNSVLALLALKEFGVPRVIARARN 102 (225)
T ss_pred CcCCEEEEeeCCCHHHHHHHHHHHHhcCCCcEEEEecC
Confidence 378888754433 37776666655 899854 44553
No 231
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=31.05 E-value=1.7e+02 Score=29.70 Aligned_cols=112 Identities=15% Similarity=0.115 Sum_probs=64.5
Q ss_pred cCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC-CcEEEecC-ccCcCChHHHH
Q 036539 542 DVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK-GQMRWIAA-QSDRLRNGELY 619 (749)
Q Consensus 542 ~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~-~~V~flG~-~~~~~~~~el~ 619 (749)
+-.|=...|.+|+.-+.... .-++++||..+. ....+++.++..|-. -+=+|+|- .+++.. .
T Consensus 41 dL~kT~~~L~~A~~~i~~i~-~~~ILfVgtk~~-----------~~~~V~~~A~~~g~~~v~~RWlgGtLTN~~~----~ 104 (196)
T TIGR01012 41 DLRKTDERLRVAAKFLVRIE-PEDILVVSARIY-----------GQKPVLKFAKVTGARAIAGRFTPGTFTNPMQ----K 104 (196)
T ss_pred cHHHHHHHHHHHHHHHHHhh-CCeEEEEecCHH-----------HHHHHHHHHHHhCCceECCeeCCCCCCCccc----c
Confidence 34455566666666655443 458999998865 123455556555432 12278872 232221 1
Q ss_pred HHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEE-cCccccccccccCceEEEECCCC
Q 036539 620 RCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFA-TNQGGPAEIIVDGVSGFHIDPYN 677 (749)
Q Consensus 620 ~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVa-t~~GG~~EiI~dg~~G~lv~p~d 677 (749)
.+. --|+.++....+ -..++.||...|.|||+ .|....++.| -+.++.+|
T Consensus 105 -~~~-~Pdlliv~dp~~-~~~Av~EA~~l~IP~Iai~DTn~dp~~v-----dypIP~Nd 155 (196)
T TIGR01012 105 -AFR-EPEVVVVTDPRA-DHQALKEASEVGIPIVALCDTDNPLRYV-----DLVIPTNN 155 (196)
T ss_pred -ccC-CCCEEEEECCcc-ccHHHHHHHHcCCCEEEEeeCCCCCccC-----CEEECCCC
Confidence 122 245555543322 34689999999999999 4666666665 25566554
No 232
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=30.91 E-value=3.6e+02 Score=27.04 Aligned_cols=31 Identities=23% Similarity=0.363 Sum_probs=23.8
Q ss_pred EEEEcCCCchHHHHHHHHcCCCcEEEEecCC
Q 036539 370 LIIGNYSDGNLVASVMASKLGITQATIAHAL 400 (749)
Q Consensus 370 IIh~h~~~~~lva~lla~~~gvp~v~t~H~l 400 (749)
++.+-++.|+..|..++.+.++|.|.+-=++
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~~avLiNPav 91 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGLPAVLINPAV 91 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCCCEEEEcCCC
Confidence 5555568888999999999999987665443
No 233
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=30.61 E-value=5.8e+02 Score=25.79 Aligned_cols=92 Identities=15% Similarity=0.066 Sum_probs=52.1
Q ss_pred HHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccccc-----ccCceEEEE-CCCCHHHHHHHHHHHHHHhcC
Q 036539 621 CIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEII-----VDGVSGFHI-DPYNGDESSDKIADFFEACKV 694 (749)
Q Consensus 621 ~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI-----~dg~~G~lv-~p~d~e~lA~aI~~~l~~l~~ 694 (749)
.+.+ +|+++...-.+..-..+.+....|.+|-+.+.+...+++ ..|.--+-+ ..+..-.+|..|.+-++.++.
T Consensus 67 ~l~~-adlViaaT~d~elN~~i~~~a~~~~lvn~~d~~~~~~f~~Pa~~~~g~l~iaIsT~G~sP~la~~lr~~ie~~~~ 145 (202)
T PRK06718 67 DIVD-AFLVIAATNDPRVNEQVKEDLPENALFNVITDAESGNVVFPSALHRGKLTISVSTDGASPKLAKKIRDELEALYD 145 (202)
T ss_pred hcCC-ceEEEEcCCCHHHHHHHHHHHHhCCcEEECCCCccCeEEEeeEEEcCCeEEEEECCCCChHHHHHHHHHHHHHcc
Confidence 3453 888777665555556666665778888887765544443 333322323 233455788888887776552
Q ss_pred C-HHHHHHHHHHHHHHHHHh
Q 036539 695 D-PTYWNKFSTEGLKRINEC 713 (749)
Q Consensus 695 d-p~~~~~ms~~a~~~v~~~ 713 (749)
. -+.+-++-...|..+.++
T Consensus 146 ~~~~~~~~~~~~~R~~~k~~ 165 (202)
T PRK06718 146 ESYESYIDFLYECRQKIKEL 165 (202)
T ss_pred hhHHHHHHHHHHHHHHHHHh
Confidence 2 122333444555555443
No 234
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=30.54 E-value=42 Score=37.88 Aligned_cols=38 Identities=26% Similarity=0.546 Sum_probs=27.2
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGT 307 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~ 307 (749)
|||+++....+ |+++|.. |.+.||+|. .||| +|+..|.
T Consensus 1 mkiaiigqs~f-------------g~~vy~~-------------lrk~gheiv---~vft--ipdk~g~ 38 (881)
T KOG2452|consen 1 MKIAVIGQSLF-------------GQEVYCH-------------LRKEGHEVV---GVFT--VPDKDGK 38 (881)
T ss_pred CeeEEechhhh-------------hHHHHHH-------------HHhcCceEE---EEEE--ecCCCCC
Confidence 78999975554 7778776 899999985 3555 5665554
No 235
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=30.25 E-value=1.1e+02 Score=31.51 Aligned_cols=51 Identities=18% Similarity=0.105 Sum_probs=29.5
Q ss_pred chHHHHHHHHHHHHHHcCCCceEEE-EcCCCch-HHHHHHHHcCCCcEEEEec
Q 036539 348 YLEGFAQDATTMILEFLGGKPDLII-GNYSDGN-LVASVMASKLGITQATIAH 398 (749)
Q Consensus 348 yl~~f~~~~~~~l~~~l~~~pDIIh-~h~~~~~-lva~lla~~~gvp~v~t~H 398 (749)
|.+.+...+.+.+...++...-|+- .||..+. .-....++.+.+|.|++.-
T Consensus 56 yres~~ks~~rlldSalkn~~VIvDdtNYyksmRrqL~ceak~~~tt~ciIyl 108 (261)
T COG4088 56 YRESFLKSVERLLDSALKNYLVIVDDTNYYKSMRRQLACEAKERKTTWCIIYL 108 (261)
T ss_pred HHHHHHHHHHHHHHHHhcceEEEEecccHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 5567777777777766543232222 4555542 2334566778888876544
No 236
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=30.23 E-value=3.9e+02 Score=27.14 Aligned_cols=73 Identities=14% Similarity=0.180 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCc-EEEECCCCCCCcHHHHHHHHcCCcEEEcCcc
Q 036539 586 EIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKG-AFVQPALYEAFGLTVIEAMNCGLPTFATNQG 658 (749)
Q Consensus 586 ~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aad-vfV~PS~~E~fGLtvlEAMa~GlPVVat~~G 658 (749)
..+.+++.+++++..-.+.+.+.-+.......+-.+++...| +++.|...+...-.+-++...|+|||..+.+
T Consensus 16 ~~~g~~~~a~~~g~~~~~~~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~~~~~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 16 VIKGAKAAAKELGYEVEIVFDAQNDPEEQIEQIEQAISQGVDGIIVSPVDPDSLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp HHHHHHHHHHHHTCEEEEEEESTTTHHHHHHHHHHHHHTTESEEEEESSSTTTTHHHHHHHHHTTSEEEEESST
T ss_pred HHHHHHHHHHHcCCEEEEeCCCCCCHHHHHHHHHHHHHhcCCEEEecCCCHHHHHHHHHHHhhcCceEEEEecc
Confidence 445566666666543222211211101112223334444455 4556666777777788899999999998777
No 237
>COG4195 Phage-related replication protein [General function prediction only]
Probab=29.81 E-value=66 Score=32.24 Aligned_cols=32 Identities=25% Similarity=0.418 Sum_probs=25.7
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHH
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRI 283 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L 283 (749)
-+++|++||| ||.+-=+.++||+++++-+-+|
T Consensus 37 S~v~ilapHG-------------G~IE~GvSELare~s~e~S~yl 68 (208)
T COG4195 37 SRVLILAPHG-------------GGIEGGVSELAREFSDEYSGYL 68 (208)
T ss_pred ceEEEEeccC-------------CccCccHHHHHHHHHHHHHHHH
Confidence 4799999998 7888888999998887755544
No 238
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=29.21 E-value=6.1e+02 Score=29.38 Aligned_cols=108 Identities=15% Similarity=0.178 Sum_probs=72.7
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHcc-CcEEEECCC-CCCCcHH
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADT-KGAFVQPAL-YEAFGLT 641 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~a-advfV~PS~-~E~fGLt 641 (749)
.+++||.+... .+..+.+..+..|. .|+... +..+....+... .|+++.=-+ .+.-|+.
T Consensus 5 ~~iLvVDDd~~-----------ir~~l~~~L~~~G~--~v~~a~------~~~~al~~i~~~~~~lvl~Di~mp~~~Gl~ 65 (464)
T COG2204 5 ARILVVDDDPD-----------IRELLEQALELAGY--EVVTAE------SAEEALEALSESPFDLVLLDIRMPGMDGLE 65 (464)
T ss_pred CCEEEEeCCHH-----------HHHHHHHHHHHcCC--eEEEeC------CHHHHHHHHhcCCCCEEEEecCCCCCchHH
Confidence 35677776654 24445555555552 344433 345666667653 355554332 4678899
Q ss_pred HHHHHHc---CCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHHH
Q 036539 642 VIEAMNC---GLPTFA-TNQGGP---AEIIVDGVSGFHIDPYNGDESSDKIADFFE 690 (749)
Q Consensus 642 vlEAMa~---GlPVVa-t~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~ 690 (749)
+++.+.. ++|||. |.+|.+ .+-+..|...|+..|-|++.+...+.++++
T Consensus 66 ll~~i~~~~~~~pVI~~Tg~g~i~~AV~A~k~GA~Dfl~KP~~~~~L~~~v~ral~ 121 (464)
T COG2204 66 LLKEIKSRDPDLPVIVMTGHGDIDTAVEALRLGAFDFLEKPFDLDRLLAIVERALE 121 (464)
T ss_pred HHHHHHhhCCCCCEEEEeCCCCHHHHHHHHhcCcceeeeCCCCHHHHHHHHHHHHH
Confidence 8887766 799988 777774 455567888899999999999999987774
No 239
>COG3171 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.17 E-value=49 Score=30.32 Aligned_cols=32 Identities=38% Similarity=0.728 Sum_probs=26.5
Q ss_pred HHhhcCCcccc----CccHHHHHHHHHHHHHhhcCC
Q 036539 192 RFKEWGFEKGW----GHTAERVRETMRSLSEVLQAP 223 (749)
Q Consensus 192 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p 223 (749)
+||+|||..-| |.+|+-+-|++.-..|-+.+|
T Consensus 25 EFQeLgF~v~~~~~eg~~ae~~dea~drFidevI~~ 60 (119)
T COG3171 25 EFQELGFSVQWSFHEGTSAEDVDEAVDRFIDEVIAP 60 (119)
T ss_pred HHHhhheeeEEEecCCccHHHHHHHHHHHHHHHHcc
Confidence 69999999999 778999999988777655554
No 240
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=29.03 E-value=2.7e+02 Score=29.30 Aligned_cols=89 Identities=13% Similarity=0.174 Sum_probs=57.1
Q ss_pred HHHHHccCcEEEECCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHH
Q 036539 619 YRCIADTKGAFVQPAL-YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPT 697 (749)
Q Consensus 619 ~~~la~aadvfV~PS~-~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~ 697 (749)
..-+.+ ||++|.--. +|++=-.+++.+ .+.++++...++..+- ....--++.+|.+...+++.|.+.|. ..||+
T Consensus 47 ~~~l~~-ADliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~~-~~~dPH~Wldp~n~~~~a~~I~~~L~--~~dP~ 121 (264)
T cd01020 47 AAKVST-ADIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDDK-EGDNPHLWYDPETMSKVANALADALV--KADPD 121 (264)
T ss_pred HHHHhh-CCEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccCC-CCCCCceecCHhHHHHHHHHHHHHHH--HhCcc
Confidence 344553 888887653 576555666655 4566666544432110 01133478899999999999998774 46888
Q ss_pred HHHHHHHHHHHHHHH
Q 036539 698 YWNKFSTEGLKRINE 712 (749)
Q Consensus 698 ~~~~ms~~a~~~v~~ 712 (749)
..+...+|+.++..+
T Consensus 122 ~~~~y~~N~~~~~~~ 136 (264)
T cd01020 122 NKKYYQANAKKFVAS 136 (264)
T ss_pred cHHHHHHHHHHHHHH
Confidence 888888888777644
No 241
>PLN00016 RNA-binding protein; Provisional
Probab=28.91 E-value=49 Score=36.77 Aligned_cols=20 Identities=20% Similarity=0.145 Sum_probs=16.6
Q ss_pred HHHHHHHHcCCcccceEEEEeCCC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRLI 301 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~~ 301 (749)
.|++.|.++||+|+ ++++..
T Consensus 71 ~lv~~L~~~G~~V~----~l~R~~ 90 (378)
T PLN00016 71 YLAKELVKAGHEVT----LFTRGK 90 (378)
T ss_pred HHHHHHHHCCCEEE----EEecCC
Confidence 67778899999998 888763
No 242
>PLN02670 transferase, transferring glycosyl groups
Probab=28.83 E-value=4.2e+02 Score=30.73 Aligned_cols=37 Identities=22% Similarity=0.436 Sum_probs=26.2
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
..|+++ -||+| |-..-.+ +||+.|+.+|+.|+ +++..
T Consensus 7 ~HVvl~---P~paq----------GHi~P~l--------~LAk~La~~G~~vT----~v~t~ 43 (472)
T PLN02670 7 LHVAMF---PWLAM----------GHLIPFL--------RLSKLLAQKGHKIS----FISTP 43 (472)
T ss_pred cEEEEe---CChhh----------hHHHHHH--------HHHHHHHhCCCEEE----EEeCC
Confidence 367777 35544 6666667 67778889999999 77755
No 243
>PRK12342 hypothetical protein; Provisional
Probab=28.55 E-value=1.4e+02 Score=31.59 Aligned_cols=34 Identities=15% Similarity=0.171 Sum_probs=26.7
Q ss_pred CceEEEEcC--CC--chHHHHHHHHcCCCcEEEEecCC
Q 036539 367 KPDLIIGNY--SD--GNLVASVMASKLGITQATIAHAL 400 (749)
Q Consensus 367 ~pDIIh~h~--~~--~~lva~lla~~~gvp~v~t~H~l 400 (749)
.||+|.|-. .+ .+.++..+|..+|+|++..+..+
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~~ 146 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSKI 146 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEEE
Confidence 599999632 33 47899999999999998877654
No 244
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=27.83 E-value=8.7e+02 Score=26.91 Aligned_cols=125 Identities=9% Similarity=-0.013 Sum_probs=67.3
Q ss_pred CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHH----HHHHccCcEEEECC--CC
Q 036539 562 NLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELY----RCIADTKGAFVQPA--LY 635 (749)
Q Consensus 562 ~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~----~~la~aadvfV~PS--~~ 635 (749)
.+.+++|+|.|.- -+...+...+.|. .+|.+........+.++++ .+... +||++..| ..
T Consensus 173 ~~k~vLvIGaGem------------~~l~a~~L~~~g~-~~i~v~nRt~~~~~~~~~~~~~~~~~~~-~DvVIs~t~~Ta 238 (338)
T PRK00676 173 KKASLLFIGYSEI------------NRKVAYYLQRQGY-SRITFCSRQQLTLPYRTVVREELSFQDP-YDVIFFGSSESA 238 (338)
T ss_pred cCCEEEEEcccHH------------HHHHHHHHHHcCC-CEEEEEcCCccccchhhhhhhhhhcccC-CCEEEEcCCcCC
Confidence 3579999999844 2333333344454 4677776443344555554 55664 99999753 23
Q ss_pred CCCcHHHHHHHHcCCcEEEcCcccccccc--ccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 036539 636 EAFGLTVIEAMNCGLPTFATNQGGPAEII--VDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRI 710 (749)
Q Consensus 636 E~fGLtvlEAMa~GlPVVat~~GG~~EiI--~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v 710 (749)
-+.|....|.+..-.+-+.-|..-|+++= ....+-.++ |.+++.+.+.+ |-..|++....+...+
T Consensus 239 s~~p~i~~~~~~~~~~r~~iDLAvPRdId~v~~~~~v~Ly---~iDdL~~i~~~-------n~~~R~~~~~~ae~iI 305 (338)
T PRK00676 239 YAFPHLSWESLADIPDRIVFDFNVPRTFPWSETPFPHRYL---DMDFISEWVQK-------HLQCRKEVNNKHKLSL 305 (338)
T ss_pred CCCceeeHHHHhhccCcEEEEecCCCCCccccccCCcEEE---EhHHHHHHHHH-------HHHHHHHHHHHHHHHH
Confidence 33455555555432224666777777663 112233355 55666555532 3344555545555444
No 245
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=27.17 E-value=6.5e+02 Score=25.24 Aligned_cols=94 Identities=16% Similarity=0.085 Sum_probs=53.7
Q ss_pred CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHH-cCCCCcEEEecCccCcCChHHHHHHH
Q 036539 544 VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEK-YQLKGQMRWIAAQSDRLRNGELYRCI 622 (749)
Q Consensus 544 ~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~-~~L~~~V~flG~~~~~~~~~el~~~l 622 (749)
..-.+.+.+.+..+......+.++........ + .......... .....++..+.. ..+..++..++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 255 (286)
T PF04230_consen 189 EEYIEEIAELIQRLLDKGYKIVLLPFSPSDDD------E----DDDDFNEIDIKAEKFFNVIIIDY---SLSPDELLELI 255 (286)
T ss_pred hhHHHHHHHHHHHhhcccceeEEEEeeeccch------h----hHHHHHhhhhhcccccceeEecC---CCCHHHHHHHH
Confidence 33455566667666653334444444444330 0 1111111110 222234444432 56688999999
Q ss_pred HccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC
Q 036539 623 ADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN 656 (749)
Q Consensus 623 a~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~ 656 (749)
+. ++++|..... ..+=|+++|+|+|+-.
T Consensus 256 ~~-~~~~Is~RlH-----~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 256 SQ-ADLVISMRLH-----GAILALSLGVPVIAIS 283 (286)
T ss_pred hc-CCEEEecCCH-----HHHHHHHcCCCEEEEe
Confidence 95 9999877642 5677999999999854
No 246
>PRK11519 tyrosine kinase; Provisional
Probab=27.14 E-value=6.5e+02 Score=30.78 Aligned_cols=44 Identities=14% Similarity=0.116 Sum_probs=27.8
Q ss_pred HHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHcCCCcEEEEecC
Q 036539 356 ATTMILEFLGGKPDLIIGNYSDGN--LVASVMASKLGITQATIAHA 399 (749)
Q Consensus 356 ~~~~l~~~l~~~pDIIh~h~~~~~--lva~lla~~~gvp~v~t~H~ 399 (749)
....+...++.++|+|+...+... .-+..+++..+..+.+.-++
T Consensus 624 ~~~~ll~~l~~~yD~ViiDtpP~~~v~Da~~l~~~~d~~l~Vvr~~ 669 (719)
T PRK11519 624 RFAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYA 669 (719)
T ss_pred HHHHHHHHHHhcCCEEEEeCCCcccchHHHHHHHHCCeEEEEEeCC
Confidence 344445555668999998887643 23556777777666555443
No 247
>PLN02764 glycosyltransferase family protein
Probab=26.19 E-value=5.8e+02 Score=29.45 Aligned_cols=38 Identities=18% Similarity=0.440 Sum_probs=26.6
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLI 301 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~ 301 (749)
+.|+++- ||+| |-..-.+ +||+.|+.+|+.|+ ++|...
T Consensus 6 ~Hvvl~P---~paq----------GHi~P~l--------~LAk~La~~g~~vT----~~tt~~ 43 (453)
T PLN02764 6 FHVLMYP---WFAT----------GHMTPFL--------FLANKLAEKGHTVT----FLLPKK 43 (453)
T ss_pred cEEEEEC---Cccc----------ccHHHHH--------HHHHHHHhCCCEEE----EEeCcc
Confidence 4677773 4443 6666667 67777888999999 877653
No 248
>PRK09213 pur operon repressor; Provisional
Probab=26.10 E-value=6.7e+02 Score=26.87 Aligned_cols=43 Identities=16% Similarity=0.173 Sum_probs=32.2
Q ss_pred HHHHHHHHc-CCCceEEEEcCCCchHHHHHHHHcCCCcEEEEec
Q 036539 356 ATTMILEFL-GGKPDLIIGNYSDGNLVASVMASKLGITQATIAH 398 (749)
Q Consensus 356 ~~~~l~~~l-~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H 398 (749)
+...+...+ ..++|+|.+-...+-.+|..+|..+++|+++.-.
T Consensus 118 i~~~la~~~~~~~iD~Vvtvet~GIplA~~vA~~L~vp~vivRK 161 (271)
T PRK09213 118 IGRIIASAFADKKIDAVMTVETKGIPLAYAVANYLNVPFVIVRR 161 (271)
T ss_pred HHHHHHHHhcccCCCEEEEEccccHHHHHHHHHHHCCCEEEEEE
Confidence 333444433 3379999998888888899999999999887655
No 249
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=25.79 E-value=2.2e+02 Score=30.77 Aligned_cols=118 Identities=17% Similarity=0.284 Sum_probs=67.4
Q ss_pred hHHHHHhhcccCCceeecccccCCHHHHHHHHHHHHHHhccCCCCCChhhHHHHHhhcCCccccCccHH-----------
Q 036539 139 PLVDYLLSLDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTLPKDTPYQKFELRFKEWGFEKGWGHTAE----------- 207 (749)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 207 (749)
.+|.-||... .+.|+-.=-|+.+|+..|..... ..-+ +.+.-.++..||..|=-..|.
T Consensus 123 ~~L~~lr~~A----d~vIDTs~l~~~~Lr~~i~~~~~--~~~~-----~~l~v~i~SFGfK~GiP~dAD~VfDvRfLpNP 191 (284)
T PF03668_consen 123 ELLEPLRERA----DLVIDTSNLSVHQLRERIRERFG--GDKE-----SRLTVTIQSFGFKYGIPPDADLVFDVRFLPNP 191 (284)
T ss_pred HHHHHHHHhC----CEEEECCCCCHHHHHHHHHHHhc--cCCC-----CceEEEEEEeccccCCCCCCCEEEEcCcCCCC
Confidence 4455555443 35677666788888888876532 1111 234445566666655333332
Q ss_pred ------------------------HHHHHHHHHHHhhcCCCcchHHHhhhcCCceeEEEEEcccccCCCcccCCCCCcCc
Q 036539 208 ------------------------RVRETMRSLSEVLQAPDPLHMEKFLSSLPILFNVVIFSPHGYFGQADVLGLPDTGG 263 (749)
Q Consensus 208 ------------------------~~~~~~~~~~~~~~~p~~~~~~~~~~~~pm~~rIvivs~h~~~~~~~~~g~p~tGG 263 (749)
-+.|.+.-+.++++. .++.|..+-..-+.|+|=| |||
T Consensus 192 ~y~~~Lr~lTG~D~~V~~yv~~~~~~~~f~~~~~~~l~~----~lp~y~~egk~~ltIaiGC---------------TGG 252 (284)
T PF03668_consen 192 YYVPELRPLTGLDKPVQDYVLSDPEAQEFLEKIEDLLDF----LLPRYEKEGKSYLTIAIGC---------------TGG 252 (284)
T ss_pred CCChhhhhcCCCChHHHHHHHcChhHHHHHHHHHHHHHH----HHHHHHhcCCceEEEEEEc---------------CCC
Confidence 233334444433322 3444444434445666643 799
Q ss_pred ceehhHHHHHHHHHHHHHHHHHcCCccc
Q 036539 264 QVVYILDQVKALEEELLLRIKQQGLYIK 291 (749)
Q Consensus 264 ~~vyvld~araL~~eLa~~L~~~G~eV~ 291 (749)
+-+.|. ++.+|++.|++.|+.|.
T Consensus 253 ~HRSV~-----iae~La~~L~~~~~~v~ 275 (284)
T PF03668_consen 253 QHRSVA-----IAERLAERLREKGYTVV 275 (284)
T ss_pred cCcHHH-----HHHHHHHHHHhcCCcce
Confidence 999887 44478889999999886
No 250
>PRK04531 acetylglutamate kinase; Provisional
Probab=25.74 E-value=1.7e+02 Score=33.19 Aligned_cols=55 Identities=11% Similarity=0.133 Sum_probs=35.2
Q ss_pred CCCcEEEEEec-ccCCCCHHHHHHHHHHhHccCCCeEEEEE-eccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 530 RKKPIIFSMAR-LDVVKNLTGLTEWYGKNKRLRNLVNLVIV-GAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 530 ~~k~vIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~v~LvIV-G~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
+.+..++-+|. +-. .+++.++..++.+... ..++||| |+|+. +.++.++.|+..+
T Consensus 35 ~~~~~VIKiGG~~l~-~~~~~l~~dla~L~~~--G~~~VlVHGggpq---------------I~~~l~~~gie~~ 91 (398)
T PRK04531 35 AERFAVIKVGGAVLR-DDLEALASSLSFLQEV--GLTPIVVHGAGPQ---------------LDAELDAAGIEKE 91 (398)
T ss_pred CCcEEEEEEChHHhh-cCHHHHHHHHHHHHHC--CCcEEEEECCCHH---------------HHHHHHHcCCCcE
Confidence 34555666654 322 3578888888888764 4556555 55543 6677888888654
No 251
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional
Probab=25.69 E-value=5.9e+02 Score=24.26 Aligned_cols=74 Identities=15% Similarity=0.193 Sum_probs=50.0
Q ss_pred HHHHHHHH-ccCcEEEECCC-CCCCcHHHHHHHHcCCcEEEc-Ccccc---ccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 616 GELYRCIA-DTKGAFVQPAL-YEAFGLTVIEAMNCGLPTFAT-NQGGP---AEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 616 ~el~~~la-~aadvfV~PS~-~E~fGLtvlEAMa~GlPVVat-~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.+....+. ...|++++-.. .+.-|..+++.+....|+|+. ..... .+.+..|..|++..|.+.+.+.++|...+
T Consensus 37 ~~~l~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~vi~~s~~~~~~~~~~~~~~ga~~~i~kp~~~~~l~~~i~~~~ 116 (196)
T PRK10360 37 REALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 (196)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHccCCCEEEEECCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHH
Confidence 34444443 23577777543 345678888888778888874 33332 23456688999999999999999997654
No 252
>TIGR00732 dprA DNA protecting protein DprA. Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function.
Probab=25.18 E-value=4.7e+02 Score=26.95 Aligned_cols=121 Identities=15% Similarity=0.152 Sum_probs=60.4
Q ss_pred CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcC-CCCcEE-Ee-cCccC---cCChHH
Q 036539 544 VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQ-LKGQMR-WI-AAQSD---RLRNGE 617 (749)
Q Consensus 544 ~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~-L~~~V~-fl-G~~~~---~~~~~e 617 (749)
.+|+|....-..... ....+.|+|+|.+. ..+. +-.++.+.+.+.| +- +. |. +..+. +..+..
T Consensus 82 A~GiD~~ah~~al~~---~g~tIaVl~~gld~---~yp~---~n~~l~~~i~~~ggll--iSe~p~~~~~~~~~f~~RNr 150 (220)
T TIGR00732 82 ALGIDGIAHKAALKV---NGRTIAVLGTGLDQ---IYPR---QNSKLAAKIAENGGLL--LSEYPPDTKPIKYNFPKRNR 150 (220)
T ss_pred hhhHHHHHHHHHHHc---CCCEEEEECCCCcc---CCch---hhHHHHHHHHHcCCEE--EEecCCCCCCCcccHHHHHH
Confidence 578888776555432 23567777877651 1111 1223333333333 10 10 10 10000 112334
Q ss_pred HHHHHHccCcEEEECCCCCCCc--HHHHHHHHcCCcEEEcC-------ccccccccccCceEEEECCCCHHHHH
Q 036539 618 LYRCIADTKGAFVQPALYEAFG--LTVIEAMNCGLPTFATN-------QGGPAEIIVDGVSGFHIDPYNGDESS 682 (749)
Q Consensus 618 l~~~la~aadvfV~PS~~E~fG--LtvlEAMa~GlPVVat~-------~GG~~EiI~dg~~G~lv~p~d~e~lA 682 (749)
+...+ +++.|...-.+..| .++-.|+..|+||++-. ..|...+|.+|. . ++. +.+++.
T Consensus 151 iia~l---s~~vivve~~~~sGtl~ta~~A~~~gr~v~~~pg~~~~~~~~G~~~Li~~GA-~-~i~--~~~d~~ 217 (220)
T TIGR00732 151 IISGL---SRAVLVVEAPLKSGALITARYALEQGREVFAYPGDLNSPESDGCHKLIEQGA-A-LIT--SAKDIL 217 (220)
T ss_pred HHHHh---cCEEEEEECCCCCchHHHHHHHHHhCCcEEEEcCCCCCccchHHHHHHHCCC-E-EEC--CHHHHH
Confidence 44444 44555444334445 57789999999999962 245677787763 2 332 555543
No 253
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=24.97 E-value=4.3e+02 Score=28.09 Aligned_cols=84 Identities=15% Similarity=0.240 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC---CCCCcHHHHHHHHcCCcEEEcCcccc
Q 036539 584 TAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL---YEAFGLTVIEAMNCGLPTFATNQGGP 660 (749)
Q Consensus 584 ~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~---~E~fGLtvlEAMa~GlPVVat~~GG~ 660 (749)
....+.+++.++++|+. +...... +.-.-....+.+.+..|+++++.. ...+...+..+..+++||+++..
T Consensus 146 ~~~~~~~~~~a~~~g~~--l~~~~v~-~~~~~~~~~~~l~~~~da~~~~~~~~~~~~~~~i~~~~~~~~iPv~~~~~--- 219 (294)
T PF04392_consen 146 VAQIEQLRKAAKKLGIE--LVEIPVP-SSEDLEQALEALAEKVDALYLLPDNLVDSNFEAILQLANEAKIPVFGSSD--- 219 (294)
T ss_dssp HHHHHHHHHHHHHTT-E--EEEEEES-SGGGHHHHHHHHCTT-SEEEE-S-HHHHHTHHHHHHHCCCTT--EEESSH---
T ss_pred HHHHHHHHHHHHHcCCE--EEEEecC-cHhHHHHHHHHhhccCCEEEEECCcchHhHHHHHHHHHHhcCCCEEECCH---
Confidence 45677888888888864 3333211 122233444445455788777753 33344445566778999999753
Q ss_pred ccccccCc-eEEEEC
Q 036539 661 AEIIVDGV-SGFHID 674 (749)
Q Consensus 661 ~EiI~dg~-~G~lv~ 674 (749)
..+.+|. .|+.++
T Consensus 220 -~~v~~Gal~~~~~~ 233 (294)
T PF04392_consen 220 -FYVKAGALGGYSVD 233 (294)
T ss_dssp -HHHCTT-SEEEE--
T ss_pred -HHhcCCcEEEEccC
Confidence 3344443 344444
No 254
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=24.91 E-value=8.8e+02 Score=26.38 Aligned_cols=139 Identities=12% Similarity=0.100 Sum_probs=80.4
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHH----HhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEE
Q 036539 530 RKKPIIFSMARLDVVKNLTGLTEWYG----KNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRW 605 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~LieA~~----~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~f 605 (749)
.+..+|.+.|-+.+... +.+.++.. ++..+....-.++|||....-.-.+..-....+.+.+++++.+ ..+..
T Consensus 111 ~~~Nvl~t~ga~~~i~~-~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~v 187 (311)
T PF06258_consen 111 RGPNVLPTLGAPNRITP-ERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG--GSLLV 187 (311)
T ss_pred CCCceEecccCCCcCCH-HHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC--CeEEE
Confidence 45567888888776543 34444433 3333333566788887554222222223345567788888776 34555
Q ss_pred ecCccCcCChHHHHHHHHccC----cEEEECCCCCCCcHHHHHHHHcCCcEEEcC--ccccccccccCceEEEECCCC
Q 036539 606 IAAQSDRLRNGELYRCIADTK----GAFVQPALYEAFGLTVIEAMNCGLPTFATN--QGGPAEIIVDGVSGFHIDPYN 677 (749)
Q Consensus 606 lG~~~~~~~~~el~~~la~aa----dvfV~PS~~E~fGLtvlEAMa~GlPVVat~--~GG~~EiI~dg~~G~lv~p~d 677 (749)
... +-...++...+.+.. .+.+. ..++ ...+.+.+++.--+|+|. +.-+.|-+..|..-++++...
T Consensus 188 ttS---RRTp~~~~~~L~~~~~~~~~~~~~--~~~~-~nPy~~~La~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 188 TTS---RRTPPEAEAALRELLKDNPGVYIW--DGTG-ENPYLGFLAAADAIVVTEDSVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred EcC---CCCcHHHHHHHHHhhcCCCceEEe--cCCC-CCcHHHHHHhCCEEEEcCccHHHHHHHHHcCCCEEEecCCC
Confidence 542 223344444444322 34344 2233 346889999998888883 334688888888777776543
No 255
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues t
Probab=24.91 E-value=8.4e+02 Score=25.78 Aligned_cols=154 Identities=12% Similarity=0.068 Sum_probs=83.9
Q ss_pred CCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHH
Q 036539 543 VVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCI 622 (749)
Q Consensus 543 ~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~l 622 (749)
+.+.++.+.++++..++..-.+.+-+.-.... +. ++..++.+.+.+.|. ..|.+.- ..+...+.++++++
T Consensus 104 ~~~~~~~~~~~i~~ak~~G~~v~~~~~~a~~~-----~~---~~~~~~~~~~~~~g~-~~i~l~D-T~G~~~P~~v~~lv 173 (266)
T cd07944 104 HKHEFDEALPLIKAIKEKGYEVFFNLMAISGY-----SD---EELLELLELVNEIKP-DVFYIVD-SFGSMYPEDIKRII 173 (266)
T ss_pred ccccHHHHHHHHHHHHHCCCeEEEEEEeecCC-----CH---HHHHHHHHHHHhCCC-CEEEEec-CCCCCCHHHHHHHH
Confidence 45678888888888876543344333332221 22 334445555566664 3454432 22355666666666
Q ss_pred Hc---cCc--EEEECCCCCCCcHH---HHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcC
Q 036539 623 AD---TKG--AFVQPALYEAFGLT---VIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKV 694 (749)
Q Consensus 623 a~---aad--vfV~PS~~E~fGLt---vlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~ 694 (749)
.. ..+ +-+---....+|+. .++|+.+|.=.|-+..+|+.+- +|- -..++++..+...+. ---
T Consensus 174 ~~l~~~~~~~~~i~~H~Hn~~Gla~AN~laA~~aGa~~vd~s~~G~G~~-----aGN----~~~E~~v~~l~~~~~-~~~ 243 (266)
T cd07944 174 SLLRSNLDKDIKLGFHAHNNLQLALANTLEAIELGVEIIDATVYGMGRG-----AGN----LPTELLLDYLNNKFG-KKY 243 (266)
T ss_pred HHHHHhcCCCceEEEEeCCCccHHHHHHHHHHHcCCCEEEEecccCCCC-----cCc----HHHHHHHHHHHHhhc-cCC
Confidence 53 122 21211124667776 5899999999999999998872 111 134566666643321 112
Q ss_pred CHHHHHHHHHHHHHHHHHhCCH
Q 036539 695 DPTYWNKFSTEGLKRINECYTW 716 (749)
Q Consensus 695 dp~~~~~ms~~a~~~v~~~ysw 716 (749)
|.+....+++.-.+.+.++|.|
T Consensus 244 dl~~l~~~~~~~~~~~~~~~~w 265 (266)
T cd07944 244 NLEPVLELIDEYIAPLKKKYEW 265 (266)
T ss_pred CHHHHHHHHHHHHHHHHhccCC
Confidence 4444445554555555566665
No 256
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=24.91 E-value=73 Score=34.73 Aligned_cols=19 Identities=21% Similarity=0.218 Sum_probs=15.6
Q ss_pred HHHHHHHHcCCcccceEEEEeCC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
.++..|++.||+|+ ++.+.
T Consensus 16 ~~A~~L~~~G~~V~----~~~r~ 34 (341)
T PRK08229 16 YLGGRLAAAGADVT----LIGRA 34 (341)
T ss_pred HHHHHHHhcCCcEE----EEecH
Confidence 66778899999998 88764
No 257
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=24.70 E-value=5.2e+02 Score=29.45 Aligned_cols=102 Identities=9% Similarity=-0.026 Sum_probs=64.3
Q ss_pred cEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCc
Q 036539 533 PIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDR 612 (749)
Q Consensus 533 ~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~ 612 (749)
.+.+..+...+..-..-|++++. +.+|++++++.-..+. ..+...+.++-.-.+.+++.
T Consensus 51 ~vWiHaaSVGEv~a~~pLv~~l~---~~~P~~~ilvTt~T~T--------------g~e~a~~~~~~~v~h~YlP~---- 109 (419)
T COG1519 51 LVWIHAASVGEVLAALPLVRALR---ERFPDLRILVTTMTPT--------------GAERAAALFGDSVIHQYLPL---- 109 (419)
T ss_pred eEEEEecchhHHHHHHHHHHHHH---HhCCCCCEEEEecCcc--------------HHHHHHHHcCCCeEEEecCc----
Confidence 45666677887766666666654 4678999988876655 12233444544346677762
Q ss_pred CChHHHHHHHHc-cCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC
Q 036539 613 LRNGELYRCIAD-TKGAFVQPALYEAFGLTVIEAMNCGLPTFATN 656 (749)
Q Consensus 613 ~~~~el~~~la~-aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~ 656 (749)
-...-+.++++. .-|+.|.- -.|=+|+++.|+-..|+|++--+
T Consensus 110 D~~~~v~rFl~~~~P~l~Ii~-EtElWPnli~e~~~~~~p~~LvN 153 (419)
T COG1519 110 DLPIAVRRFLRKWRPKLLIIM-ETELWPNLINELKRRGIPLVLVN 153 (419)
T ss_pred CchHHHHHHHHhcCCCEEEEE-eccccHHHHHHHHHcCCCEEEEe
Confidence 223445555532 13444433 34779999999999999998753
No 258
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=24.58 E-value=1.3e+02 Score=32.77 Aligned_cols=66 Identities=20% Similarity=0.326 Sum_probs=37.5
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCC----CCCccCCccc
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDA----RGTKCNQELE 314 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~----~g~~~~~~~e 314 (749)
|||++++ | .||+.+-+.-- .+|..++++|+.|- +++....++ .+........
T Consensus 1 ~r~~~~~--G------------KGGVGKTT~aa------A~A~~~A~~G~rtL----lvS~Dpa~~L~d~l~~~~~~~~~ 56 (305)
T PF02374_consen 1 MRILFFG--G------------KGGVGKTTVAA------ALALALARRGKRTL----LVSTDPAHSLSDVLGQKLGGEPT 56 (305)
T ss_dssp -SEEEEE--E------------STTSSHHHHHH------HHHHHHHHTTS-EE----EEESSTTTHHHHHHTS--BSS-E
T ss_pred CeEEEEe--c------------CCCCCcHHHHH------HHHHHHhhCCCCee----EeecCCCccHHHHhCCcCCCCCe
Confidence 6787776 2 37888877733 34556889999886 887664332 2333333444
Q ss_pred cccCccceEEEEec
Q 036539 315 PIEGTKHSNILRVP 328 (749)
Q Consensus 315 ~i~~~~~~~I~rvp 328 (749)
.+.+.+|.....+.
T Consensus 57 ~v~~~~~L~a~eid 70 (305)
T PF02374_consen 57 KVEGVPNLSAMEID 70 (305)
T ss_dssp EETTCSSEEEEE--
T ss_pred EecCCCCceeeecC
Confidence 56655677766664
No 259
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=24.43 E-value=8.7e+02 Score=25.79 Aligned_cols=122 Identities=12% Similarity=0.126 Sum_probs=72.7
Q ss_pred CCcEEEEEecccC--CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 531 KKPIIFSMARLDV--VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 531 ~k~vIl~vGRL~~--~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
+.|++ .|+-..+ ..|++.+++.+.+. .+.=+++=+-+. ++.+++.+.++++|+. .|.++..
T Consensus 91 ~~p~v-lm~Y~N~i~~~G~e~F~~~~~~a-----GvdgviipDLP~----------ee~~~~~~~~~~~gi~-~I~lv~P 153 (263)
T CHL00200 91 KAPIV-IFTYYNPVLHYGINKFIKKISQA-----GVKGLIIPDLPY----------EESDYLISVCNLYNIE-LILLIAP 153 (263)
T ss_pred CCCEE-EEecccHHHHhCHHHHHHHHHHc-----CCeEEEecCCCH----------HHHHHHHHHHHHcCCC-EEEEECC
Confidence 34544 6776665 55999998888764 466677766654 4567888999999984 5777763
Q ss_pred ccCcCChHHHHHHHHccCcEEEEC-CCC------CCCcHHHHHHH-----HcCCcEEEcCcccc-----ccccccCceEE
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQP-ALY------EAFGLTVIEAM-----NCGLPTFATNQGGP-----AEIIVDGVSGF 671 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~P-S~~------E~fGLtvlEAM-----a~GlPVVat~~GG~-----~EiI~dg~~G~ 671 (749)
.+ +.+.+..+.. .++-||.- |.. +.++-.+-+.. .+++|+.+ ..|-- .++...|..|+
T Consensus 154 tT---~~eri~~i~~-~a~gFIY~vS~~GvTG~~~~~~~~~~~~i~~ir~~t~~Pi~v-GFGI~~~e~~~~~~~~GADGv 228 (263)
T CHL00200 154 TS---SKSRIQKIAR-AAPGCIYLVSTTGVTGLKTELDKKLKKLIETIKKMTNKPIIL-GFGISTSEQIKQIKGWNINGI 228 (263)
T ss_pred CC---CHHHHHHHHH-hCCCcEEEEcCCCCCCCCccccHHHHHHHHHHHHhcCCCEEE-ECCcCCHHHHHHHHhcCCCEE
Confidence 22 3445555555 57633322 331 12333344444 56889887 33322 23344557788
Q ss_pred EEC
Q 036539 672 HID 674 (749)
Q Consensus 672 lv~ 674 (749)
++-
T Consensus 229 VVG 231 (263)
T CHL00200 229 VIG 231 (263)
T ss_pred EEC
Confidence 874
No 260
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=24.28 E-value=1.3e+02 Score=30.49 Aligned_cols=46 Identities=22% Similarity=0.361 Sum_probs=35.9
Q ss_pred ccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCc
Q 036539 346 YPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGIT 392 (749)
Q Consensus 346 ~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp 392 (749)
|..+......+++++.+. +.+||+|++-.-.|...|.+++..+|++
T Consensus 9 w~~I~~~~~~lA~kI~~s-~~~PDvIiaiaRGG~~pariLsd~L~~~ 54 (192)
T COG2236 9 WEEIHRLCRALAEKIRAS-GFKPDVIVAIARGGLIPARILSDFLGVK 54 (192)
T ss_pred HHHHHHHHHHHHHHHHHc-CCCCCEEEEEcCCceehHHHHHHHhCCC
Confidence 445566666777777654 6799999998887888899999999885
No 261
>PTZ00254 40S ribosomal protein SA; Provisional
Probab=24.15 E-value=1.8e+02 Score=30.79 Aligned_cols=113 Identities=12% Similarity=0.115 Sum_probs=63.2
Q ss_pred cCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCC-cEEEec-CccCcCChHHHH
Q 036539 542 DVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKG-QMRWIA-AQSDRLRNGELY 619 (749)
Q Consensus 542 ~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~-~V~flG-~~~~~~~~~el~ 619 (749)
+-.|=...|..|+.-+......-.+++||..+. ....+.+.++..|-.. .=+|+| .-+++. .
T Consensus 50 dL~kT~~~L~~Aa~~i~~i~~~~~Il~Vstr~~-----------~~~~V~k~A~~tg~~~i~~Rw~pGtlTN~~-----~ 113 (249)
T PTZ00254 50 NLAKTWEKLKLAARVIAAIENPADVVVVSSRPY-----------GQRAVLKFAQYTGASAIAGRFTPGTFTNQI-----Q 113 (249)
T ss_pred cHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCHH-----------HHHHHHHHHHHhCCeEECCcccCCCCCCcc-----c
Confidence 444555666666665544323456788998865 1344555666554321 115776 223221 1
Q ss_pred HHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEE-cCccccccccccCceEEEECCCC
Q 036539 620 RCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFA-TNQGGPAEIIVDGVSGFHIDPYN 677 (749)
Q Consensus 620 ~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVa-t~~GG~~EiI~dg~~G~lv~p~d 677 (749)
..+. --|++|+... -.=...+.||-..|+|||+ .|.....+.| -+.|+.+|
T Consensus 114 ~~f~-~P~llIV~Dp-~~d~qAI~EA~~lnIPvIal~DTds~p~~V-----Dy~IP~Nd 165 (249)
T PTZ00254 114 KKFM-EPRLLIVTDP-RTDHQAIREASYVNIPVIALCDTDSPLEYV-----DIAIPCNN 165 (249)
T ss_pred cccC-CCCEEEEeCC-CcchHHHHHHHHhCCCEEEEecCCCCcccC-----ceeeCCCC
Confidence 2222 1445554432 2234689999999999999 4666666666 24566555
No 262
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=23.96 E-value=1.2e+02 Score=32.30 Aligned_cols=19 Identities=26% Similarity=0.447 Sum_probs=16.8
Q ss_pred HHHHHHHHcCCcccceEEEEeCC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
++|+.|+++|++|. +++|.
T Consensus 21 ~~A~~lA~~g~~li----LvaR~ 39 (265)
T COG0300 21 ELAKQLARRGYNLI----LVARR 39 (265)
T ss_pred HHHHHHHHCCCEEE----EEeCc
Confidence 88889999999998 88876
No 263
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=23.25 E-value=1.9e+02 Score=32.19 Aligned_cols=33 Identities=15% Similarity=0.167 Sum_probs=19.0
Q ss_pred CceEEEEcCCCchHHHHHHHHcCCCcEEEEecCC
Q 036539 367 KPDLIIGNYSDGNLVASVMASKLGITQATIAHAL 400 (749)
Q Consensus 367 ~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l 400 (749)
.|||.-.+.-....+.- .+..+|.-.+.|-|-.
T Consensus 94 NPci~CN~~iKF~~~l~-~a~~lgad~iATGHYa 126 (356)
T COG0482 94 NPCILCNKEIKFKALLD-YAKELGADYIATGHYA 126 (356)
T ss_pred CcchhcCHHHHHHHHHH-HHHHcCCCeEEEeeeE
Confidence 57755434444433332 3344898899998844
No 264
>COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription]
Probab=23.21 E-value=2.4e+02 Score=27.63 Aligned_cols=107 Identities=19% Similarity=0.152 Sum_probs=65.0
Q ss_pred CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccC--cEEEECCCCCCCc
Q 036539 562 NLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTK--GAFVQPALYEAFG 639 (749)
Q Consensus 562 ~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aa--dvfV~PS~~E~fG 639 (749)
|+-.|+||-+... +...+....++-|.. |.... +.+|......... -++|---+..+.|
T Consensus 8 pd~~lllvdDD~~-----------f~~~LaRa~e~RGf~--v~~a~------~~~eal~~art~~PayAvvDlkL~~gsG 68 (182)
T COG4567 8 PDKSLLLVDDDTP-----------FLRTLARAMERRGFA--VVTAE------SVEEALAAARTAPPAYAVVDLKLGDGSG 68 (182)
T ss_pred CCceeEEecCChH-----------HHHHHHHHHhccCce--eEeec------cHHHHHHHHhcCCCceEEEEeeecCCCc
Confidence 4446788876644 455565555555542 22222 1233333333211 1222222356899
Q ss_pred HHHHHHHHcCCc----EEEcCccccc---cccccCceEEEECCCCHHHHHHHHHH
Q 036539 640 LTVIEAMNCGLP----TFATNQGGPA---EIIVDGVSGFHIDPYNGDESSDKIAD 687 (749)
Q Consensus 640 LtvlEAMa~GlP----VVat~~GG~~---EiI~dg~~G~lv~p~d~e~lA~aI~~ 687 (749)
|.++|++..-.| ||-|.+|.++ +.|.-|.+-|+..|.|.+++..++..
T Consensus 69 L~~i~~lr~~~~d~rivvLTGy~sIATAV~AvKlGA~~YLaKPAdaDdi~aAl~~ 123 (182)
T COG4567 69 LAVIEALRERRADMRIVVLTGYASIATAVEAVKLGACDYLAKPADADDILAALLR 123 (182)
T ss_pred hHHHHHHHhcCCcceEEEEecchHHHHHHHHHHhhhhhhcCCCCChHHHHHHHhh
Confidence 999999987654 6667777654 45566888899999999998888854
No 265
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=23.03 E-value=6.2e+02 Score=25.15 Aligned_cols=120 Identities=11% Similarity=-0.009 Sum_probs=65.3
Q ss_pred CCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEe-cC--ccCcCChHHHH
Q 036539 543 VVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWI-AA--QSDRLRNGELY 619 (749)
Q Consensus 543 ~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl-G~--~~~~~~~~el~ 619 (749)
...|+..+++.+.+. .+++.|+-++.. ..+....+.+|+.+.+..+ |. ....-+..+.+
T Consensus 83 ~~~g~~~~l~~L~~~-----g~~~~i~S~~~~-------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~ 144 (214)
T PRK13288 83 EYETVYETLKTLKKQ-----GYKLGIVTTKMR-------------DTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPV 144 (214)
T ss_pred cCcCHHHHHHHHHHC-----CCeEEEEeCCCH-------------HHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHH
Confidence 456666666666542 477888877754 4556667777887644332 21 11122444555
Q ss_pred HHHHccCcEEEECCC---CCCCcHHHHHHHHcCCcEEEcCccc--cccccccCceEEEECCCCHHHHHHHH
Q 036539 620 RCIADTKGAFVQPAL---YEAFGLTVIEAMNCGLPTFATNQGG--PAEIIVDGVSGFHIDPYNGDESSDKI 685 (749)
Q Consensus 620 ~~la~aadvfV~PS~---~E~fGLtvlEAMa~GlPVVat~~GG--~~EiI~dg~~G~lv~p~d~e~lA~aI 685 (749)
....+..+ +-|+. .+--..=+.-|.++|+++|+-..|. ..+.... ..-+.++ +..++.+.+
T Consensus 145 ~~~~~~~~--~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~-~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 145 LKALELLG--AKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQY-KPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHHcC--CCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhc-CcCEEEC--CHHHHHHHH
Confidence 55443222 23321 2333445677889999999765542 2233222 2345565 777766655
No 266
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=22.48 E-value=3.4e+02 Score=28.59 Aligned_cols=34 Identities=12% Similarity=0.062 Sum_probs=21.6
Q ss_pred CcEEEECCC-CCCCcHHHHHHHHcCCcEEEcCccc
Q 036539 626 KGAFVQPAL-YEAFGLTVIEAMNCGLPTFATNQGG 659 (749)
Q Consensus 626 advfV~PS~-~E~fGLtvlEAMa~GlPVVat~~GG 659 (749)
+|++|.=.. -.|+--++--|+.+|+|||.=+.+-
T Consensus 191 i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~ 225 (248)
T PRK08057 191 IDVVVTKNSGGAGTEAKLEAARELGIPVVMIARPA 225 (248)
T ss_pred CCEEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCC
Confidence 455554322 1245567778888899999876653
No 267
>PLN03228 methylthioalkylmalate synthase; Provisional
Probab=22.30 E-value=6.6e+02 Score=29.44 Aligned_cols=110 Identities=15% Similarity=0.212 Sum_probs=63.3
Q ss_pred CceeeecccccCCCCccCCCCCCCcchhhhhhhhhhcccCCCCC----CchH----HHHHhhcccCCceeecccc-cCCH
Q 036539 93 NALEVDFGAYEFSLPQLTLSSSIGNGISFVSKFVTAKLSGRQDC----AQPL----VDYLLSLDHQGEKLMINDN-LNTA 163 (749)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~~~~~~-~~~~ 163 (749)
.+.--.+=||-.++|.++..+.-|+ +=|-+--+|.++++.+. ..|+ -+|+-.--.+-+.+.|.|. +.+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~I~DtTLRDG 95 (503)
T PLN03228 18 TVVGRSVLPIGSSLPSLRLTRPYGK--PTLFRSCCSSESKKVATSATDLKPIVERWPEYIPNKLPDKNYVRVLDTTLRDG 95 (503)
T ss_pred ceEEEeeeecccCCCcccccCCCCC--ccHHHHHHHHhhhccccccccccchhhcccccCCcccCCCCCeEEEeCCCCCC
Confidence 3444467799999999999988776 45667778888877632 4333 3444433333444555443 5554
Q ss_pred HHHHHHHHHHHHHhccCCCCCCh-----hhHHHHHhhcCC---ccccCccHHHHHHHHHHHHHh
Q 036539 164 EKLQMALIVAEVSLSTLPKDTPY-----QKFELRFKEWGF---EKGWGHTAERVRETMRSLSEV 219 (749)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 219 (749)
.|- +..+| -++...|-++|+ |-||-.......|.++.+...
T Consensus 96 eQ~---------------~gv~fs~eeKi~Ia~~L~~~GVd~IEvG~Pa~s~~e~e~i~~i~~~ 144 (503)
T PLN03228 96 EQS---------------PGGSLTPPQKLEIARQLAKLRVDIMEVGFPGSSEEEFEAVKTIAKT 144 (503)
T ss_pred CCC---------------CCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHh
Confidence 431 11111 134556777776 567755555555556655543
No 268
>PF03568 Peptidase_C50: Peptidase family C50; InterPro: IPR005314 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to MEROPS peptidase family C50 (separase family, clan CD). The active site residues for members of this family and family C14 occur in the same order in the sequence: H,C. The separases are caspase-like proteases, which plays a central role in the chromosome segregation. In yeast they cleave the rad21 subunit of the cohesin complex at the onset of anaphase. During most of the cell cycle, separase is inactivated by the securin/cut2 protein, which probably covers its active site. ; GO: 0008233 peptidase activity, 0006508 proteolysis, 0005634 nucleus
Probab=22.28 E-value=2.9e+02 Score=31.03 Aligned_cols=102 Identities=13% Similarity=0.116 Sum_probs=60.2
Q ss_pred EEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC--c
Q 036539 535 IFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD--R 612 (749)
Q Consensus 535 Il~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~--~ 612 (749)
++|+ |+|..++..--+.|...-+....++ -++|..|. .+++.+...+. +-+.|.|+..+ +
T Consensus 262 ~~yv--lNP~gDL~~T~~~~~~~~~~~~~w~-g~~g~~P~------------~~e~~~~l~~~---dlf~Y~GHG~G~qy 323 (383)
T PF03568_consen 262 GFYV--LNPSGDLKRTEKRFEPFFKSWKGWK-GIIGRAPT------------EEEFLQALTSS---DLFLYCGHGSGEQY 323 (383)
T ss_pred eEEE--ECCCCCHHHHHHHHHHHHhcccCCC-ceECCCCC------------HHHHHHHHHhC---CeEEEecCCcHHHh
Confidence 4444 4677777776666666554433455 46777776 34455554444 34677775442 4
Q ss_pred CChHHHHHHHHccCcEEEE-CC--------CCCCCcHHHHHHHHcCCcEEEcC
Q 036539 613 LRNGELYRCIADTKGAFVQ-PA--------LYEAFGLTVIEAMNCGLPTFATN 656 (749)
Q Consensus 613 ~~~~el~~~la~aadvfV~-PS--------~~E~fGLtvlEAMa~GlPVVat~ 656 (749)
++...+.+.-.. +-++++ .| .+|+.| +++-+|.+|+|.|..+
T Consensus 324 ~~~~~i~~~~~~-~~~lL~GCsS~~l~~~g~~~~~g-~~~~yl~ag~p~vvg~ 374 (383)
T PF03568_consen 324 ISGSTIQRLDCC-AVSLLMGCSSGRLKEQGEFEPYG-TPLSYLLAGCPLVVGN 374 (383)
T ss_pred CCHhhhcccccc-CceEEecCCcccccccCCCCCCC-cHHHHHhcCChheEee
Confidence 445555554332 223332 22 267777 7889999999998764
No 269
>PLN02327 CTP synthase
Probab=22.26 E-value=8.3e+02 Score=29.00 Aligned_cols=107 Identities=17% Similarity=0.212 Sum_probs=65.6
Q ss_pred CHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCCh----------
Q 036539 546 NLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRN---------- 615 (749)
Q Consensus 546 gl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~---------- 615 (749)
+++.-.+...++......+++-+||..... .....+..+.+......++..-.+.|+.... +..
T Consensus 280 ~~~~W~~~~~~~~~~~~~v~IalVGKY~~l----~DAY~Si~eAL~hA~~~~~~~v~i~wI~se~--l~~~~~~~~~~~y 353 (557)
T PLN02327 280 DLEEWTARAESCDNLTEPVRIAMVGKYTGL----SDSYLSVLKALLHASVACSRKLVIDWVAASD--LEDETAKETPDAY 353 (557)
T ss_pred ChHHHHHHHHHHhCCCCceEEEEEecccCC----cHhHHHHHHHHHHHHHHcCCeeEEEEEchhh--cCCcccccccchh
Confidence 344444444444443446999999987541 1234555666666666777777888986322 111
Q ss_pred HHHHHHHHccCcEEEECCCC-----CCCcHHHHHHHHcCCcEEEcCccc
Q 036539 616 GELYRCIADTKGAFVQPALY-----EAFGLTVIEAMNCGLPTFATNQGG 659 (749)
Q Consensus 616 ~el~~~la~aadvfV~PS~~-----E~fGLtvlEAMa~GlPVVat~~GG 659 (749)
..+...+.+ +|.+++|.-+ |+.-..+-.|...|+|+++.+.|-
T Consensus 354 ~~~~~~L~~-~DGIvvpGGfG~~~~~G~i~ai~~are~~iP~LGIClGm 401 (557)
T PLN02327 354 AAAWKLLKG-ADGILVPGGFGDRGVEGKILAAKYARENKVPYLGICLGM 401 (557)
T ss_pred hhhHHhhcc-CCEEEeCCCCCCcccccHHHHHHHHHHcCCCEEEEcHHH
Confidence 124456775 8888888643 223234456667899999998873
No 270
>PRK15408 autoinducer 2-binding protein lsrB; Provisional
Probab=22.21 E-value=8.8e+02 Score=26.41 Aligned_cols=42 Identities=10% Similarity=0.138 Sum_probs=28.1
Q ss_pred HHHHHHccCcEEEE-CCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 036539 618 LYRCIADTKGAFVQ-PALYEAFGLTVIEAMNCGLPTFATNQGG 659 (749)
Q Consensus 618 l~~~la~aadvfV~-PS~~E~fGLtvlEAMa~GlPVVat~~GG 659 (749)
+..++++..|.+++ |...++..-.+-+|+..|+|||+.+...
T Consensus 73 i~~li~~~vdgIiv~~~d~~al~~~l~~a~~~gIpVV~~d~~~ 115 (336)
T PRK15408 73 INNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVKVLTWDSDT 115 (336)
T ss_pred HHHHHHcCCCEEEEecCCHHHHHHHHHHHHHCCCeEEEeCCCC
Confidence 34455544555554 5444555567888999999999987653
No 271
>PF03308 ArgK: ArgK protein; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK [] resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase.; PDB: 3MD0_A 3P32_A 2QM7_A 2QM8_A 2WWW_D 2P67_A 3NXS_A.
Probab=22.18 E-value=4e+02 Score=28.49 Aligned_cols=102 Identities=14% Similarity=0.119 Sum_probs=51.3
Q ss_pred HHHHHHHHcCCcccceEEEEeC--CCCCCCCCccCCcc--ccccCccceEEEEecCccCCccccccccccccccchHHHH
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTR--LIPDARGTKCNQEL--EPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFA 353 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~--~~p~~~g~~~~~~~--e~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~ 353 (749)
.|.+.+.++|+.|- |++- ..|-..|....++. ......+++.|-.++.+...| -+...+
T Consensus 48 ~l~~~~~~~g~~Va----VlAVDPSSp~tGGAlLGDRiRM~~~~~d~~vfIRS~atRG~lG-------------Gls~~t 110 (266)
T PF03308_consen 48 ALIRELRERGKRVA----VLAVDPSSPFTGGALLGDRIRMQELSRDPGVFIRSMATRGSLG-------------GLSRAT 110 (266)
T ss_dssp HHHHHHHHTT--EE----EEEE-GGGGCC---SS--GGGCHHHHTSTTEEEEEE---SSHH-------------HHHHHH
T ss_pred HHHHHHhhcCCceE----EEEECCCCCCCCCcccccHHHhcCcCCCCCEEEeecCcCCCCC-------------CccHhH
Confidence 67778889999998 6654 33444444444443 334455678888888776533 123344
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecC
Q 036539 354 QDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHA 399 (749)
Q Consensus 354 ~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~ 399 (749)
.++...+.+. .+|+|+....-.+-.-.-++....+.+++..-+
T Consensus 111 ~~~v~ll~aa---G~D~IiiETVGvGQsE~~I~~~aD~~v~v~~Pg 153 (266)
T PF03308_consen 111 RDAVRLLDAA---GFDVIIIETVGVGQSEVDIADMADTVVLVLVPG 153 (266)
T ss_dssp HHHHHHHHHT---T-SEEEEEEESSSTHHHHHHTTSSEEEEEEESS
T ss_pred HHHHHHHHHc---CCCEEEEeCCCCCccHHHHHHhcCeEEEEecCC
Confidence 4555444443 799999876554433344455555544444433
No 272
>PLN02534 UDP-glycosyltransferase
Probab=22.17 E-value=8.2e+02 Score=28.52 Aligned_cols=37 Identities=16% Similarity=0.469 Sum_probs=26.5
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
..|+++- ||+| |-..-.+ +||+.|+.+|+.|| +++..
T Consensus 9 ~Hvv~vP---fpaq----------GHi~P~l--------~LAk~La~~G~~vT----~v~t~ 45 (491)
T PLN02534 9 LHFVLIP---LMAQ----------GHMIPMI--------DMARLLAERGVIVS----LVTTP 45 (491)
T ss_pred CEEEEEC---CCCc----------chHHHHH--------HHHHHHHhCCCeEE----EEECC
Confidence 3677763 5554 5666666 77778899999999 77765
No 273
>PF06377 Adipokin_hormo: Adipokinetic hormone; InterPro: IPR010475 This family consists of several insect adipokinetic hormone as well as the related crustacean red pigment concentrating hormone (RPCH) []. Flight activity of insects comprises one of the most intense biochemical processes known in nature, and therefore provides an attractive model system to study the hormonal regulation of metabolism during physical exercise. In long-distance flying insects, such as the migratory locust, both carbohydrate and lipid reserves are utilised as fuels for sustained flight activity. The mobilisation of these energy stores in Locusta migratoria (Migratory locust) is mediated by three structurally related adipokinetic hormones (AKHs), which are all capable of stimulating the release of both carbohydrates and lipids from the fat body [].; GO: 0005179 hormone activity
Probab=22.02 E-value=32 Score=26.69 Aligned_cols=14 Identities=29% Similarity=0.817 Sum_probs=11.1
Q ss_pred cCCccccCccHHHH
Q 036539 196 WGFEKGWGHTAERV 209 (749)
Q Consensus 196 ~~~~~~~~~~~~~~ 209 (749)
|.|-||||.-++..
T Consensus 2 LnFSp~WGKRs~~~ 15 (48)
T PF06377_consen 2 LNFSPGWGKRSAGA 15 (48)
T ss_pred cccCCCcccccccC
Confidence 67999999876654
No 274
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=21.88 E-value=1.5e+02 Score=27.99 Aligned_cols=39 Identities=15% Similarity=0.349 Sum_probs=23.7
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTR 299 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~ 299 (749)
|||++|+ |.|+ ..|.. +.|.+.+++.+.+.|++++ ++-.
T Consensus 1 Mkilii~--gS~r---------~~~~t-------~~l~~~~~~~l~~~g~e~~----~i~l 39 (152)
T PF03358_consen 1 MKILIIN--GSPR---------KNSNT-------RKLAEAVAEQLEEAGAEVE----VIDL 39 (152)
T ss_dssp -EEEEEE--SSSS---------TTSHH-------HHHHHHHHHHHHHTTEEEE----EEEC
T ss_pred CEEEEEE--CcCC---------CCCHH-------HHHHHHHHHHHHHcCCEEE----EEec
Confidence 7999985 4332 23422 2333466777888899998 6643
No 275
>COG3181 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.87 E-value=9e+02 Score=26.57 Aligned_cols=144 Identities=13% Similarity=0.111 Sum_probs=77.2
Q ss_pred CHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHcc
Q 036539 546 NLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADT 625 (749)
Q Consensus 546 gl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~a 625 (749)
-+..+-+....++. +|. .+.+.|.+.. +.| .-.+..+++..|+ .++++.+-. ..+.+..++...
T Consensus 133 ~~~t~~dlv~~~k~-~p~-~v~~~~~g~G---s~d------hl~~~~~~k~~Gi--~~~~Vpy~g---~gea~taLlgg~ 196 (319)
T COG3181 133 PYKTLKDLVAYAKA-DPG-SVIGGGSGLG---SAD------HLAGALFAKAAGI--KITYVPYKG---GGEALTALLGGH 196 (319)
T ss_pred CcccHHHHHHHHHh-CCC-eEEecCCCCC---cHH------HHHHHHHHHHhCC--ceeEEeecC---ccHHHHHHhcCc
Confidence 46667777777765 455 3333344432 111 1234556777776 566666322 244555666554
Q ss_pred CcEEEECCCCCCCcHHHHHHHHcC-CcEE-------EcCccccccc----cccCceEEEECCCCHHHHHHHHHHHHHHhc
Q 036539 626 KGAFVQPALYEAFGLTVIEAMNCG-LPTF-------ATNQGGPAEI----IVDGVSGFHIDPYNGDESSDKIADFFEACK 693 (749)
Q Consensus 626 advfV~PS~~E~fGLtvlEAMa~G-lPVV-------at~~GG~~Ei----I~dg~~G~lv~p~d~e~lA~aI~~~l~~l~ 693 (749)
.|+.+.- ..|..+ -+.+-... +.|. ..|++-+.|. +-..-+|+..+++-+++..+++.+.+++..
T Consensus 197 v~a~~~~-~se~~~--~vksG~lr~Lav~s~eRl~~~pdvPT~~E~G~~~~~~~wrgvfap~g~~~e~~~~~~~a~kk~l 273 (319)
T COG3181 197 VDAGSTN-LSELLS--QVKSGTLRLLAVFSEERLPGLPDVPTLKEQGYDVVMSIWRGVFAPAGTPDEIIAKLSAALKKAL 273 (319)
T ss_pred eeeeecC-hhhhhh--hhccCceEEEEeechhhcCCCCCCCChHhcCCceeeeeeeEEEeCCCCCHHHHHHHHHHHHHHh
Confidence 5554322 122211 11111111 1111 1122222211 112247888899999999999999999999
Q ss_pred CCHHHHHHHHHHHHH
Q 036539 694 VDPTYWNKFSTEGLK 708 (749)
Q Consensus 694 ~dp~~~~~ms~~a~~ 708 (749)
++|+..+++-+.+..
T Consensus 274 ~s~e~~~~~~~~~~~ 288 (319)
T COG3181 274 ASPEWQKRLKELGLV 288 (319)
T ss_pred cCHHHHHHHHhcCCC
Confidence 999987776655543
No 276
>TIGR03642 cas_csx13 CRISPR-associated protein, Csx13 family. This model describes a protein N-terminal protein sequence domain strictly associated with CRISPR and CRISPR-associated protein systems. This model and TIGR02584 identify two separate clades from a larger homology domain family, both CRISPR-associated, while other homologs are found that may not be. Members are found in bacteria that include Pelotomaculum thermopropionicum SI, Thermoanaerobacter tengcongensis MB4, and Roseiflexus sp. RS-1, and in archaea that include Thermoplasma volcanium, Picrophilus torridus, and Methanospirillum hungatei. The molecular function is unknown.
Probab=21.83 E-value=2.9e+02 Score=26.02 Aligned_cols=98 Identities=18% Similarity=0.203 Sum_probs=47.5
Q ss_pred HHHHHHHHcCCcccceEEEEeCCCCCCC-CCcc-CCccccccCccceEEEEecCccCCccccccccccccc--cchHHHH
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRLIPDAR-GTKC-NQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVY--PYLEGFA 353 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~~p~~~-g~~~-~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~--pyl~~f~ 353 (749)
+...+|+++|..++ .|.+++...+... +... ...+. ......+|..++.. -.++- ...+.+.
T Consensus 9 Etl~aL~~~g~~i~-ev~lI~T~~~~v~~~~~~l~~~l~--~~~~~~~i~~i~~~-----------~~DI~t~~d~~~~~ 74 (124)
T TIGR03642 9 EAIDYLKKKGEPIS-DVILIYTKDPYVLSALRALKDSLL--KKFYKAEVHKIPLK-----------FDDILSDEDILTFM 74 (124)
T ss_pred HHHHHHHhcCCCCC-eEEEEEcCCHHHHHHHHHHHHHhH--HhcCCcEEEEeccC-----------ccccCCHHHHHHHH
Confidence 66678899999866 6667775533221 1000 00010 01112344444321 01111 1223455
Q ss_pred HHHHHHHHHHcCCCce--EEEEcCCCc----hHHHHHHHHcCC
Q 036539 354 QDATTMILEFLGGKPD--LIIGNYSDG----NLVASVMASKLG 390 (749)
Q Consensus 354 ~~~~~~l~~~l~~~pD--IIh~h~~~~----~lva~lla~~~g 390 (749)
..+.+.+... ..+++ -+|++-+-| +..+.+++..+|
T Consensus 75 ~~I~~~i~~l-~~~~~~~~lh~~iaGGRK~Ms~~~~~a~sl~g 116 (124)
T TIGR03642 75 SIAAKEVKKE-RENYGCERIIVNISGGRKIMTIILALYAQLLF 116 (124)
T ss_pred HHHHHHHHHH-hhCCCcceEEEEecCCHHHHHHHHHHHHHHhC
Confidence 5444444443 44565 699887776 555666666655
No 277
>TIGR01568 A_thal_3678 uncharacterized plant-specific domain TIGR01568. This model describes an uncharacterized domain of about 70 residues found exclusively in plants, generally toward the C-terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana. Other regions of these proteins tend to consist largely of low-complexity sequence.
Probab=21.64 E-value=1.6e+02 Score=24.62 Aligned_cols=50 Identities=18% Similarity=0.299 Sum_probs=32.9
Q ss_pred CCCChhhHHHHHhhcCCccccCccHHHHHHHHHHHHHhhcCCCcc--hHHHhh
Q 036539 182 KDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPL--HMEKFL 232 (749)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~ 232 (749)
...||.+|+..++||=-|.|=+..-+...|.+..-.. |++|... .+.+|.
T Consensus 7 S~DPy~DFr~SM~EMI~~~~i~~~w~~LeeLL~cYL~-LN~~~~H~~Iv~AF~ 58 (66)
T TIGR01568 7 SDDPYEDFRRSMEEMIEERELEADWKELEELLACYLD-LNPKKSHRFIVRAFV 58 (66)
T ss_pred CCChHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH-hCCchhhhHHHHHHH
Confidence 5679999999999998777644333555555555443 5666633 455554
No 278
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=21.59 E-value=1e+03 Score=25.60 Aligned_cols=44 Identities=16% Similarity=0.028 Sum_probs=30.2
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHHHhHccC----CCeEEEEEeccC
Q 036539 530 RKKPIIFSMARLDVVKNLTGLTEWYGKNKRLR----NLVNLVIVGAFF 573 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~----~~v~LvIVG~g~ 573 (749)
+...+++|-..+--..-...+++|+..+.... .|+-+++=|||.
T Consensus 40 ~~~~~~~~p~~vQG~~A~~~I~~al~~~~~~~~~~~~Dviii~RGGGs 87 (319)
T PF02601_consen 40 PIVEIILYPASVQGEGAAASIVSALRKANEMGQADDFDVIIIIRGGGS 87 (319)
T ss_pred CCcEEEEEeccccccchHHHHHHHHHHHHhccccccccEEEEecCCCC
Confidence 33457888888877777888999999887543 345555555554
No 279
>PRK05380 pyrG CTP synthetase; Validated
Probab=21.08 E-value=8.8e+02 Score=28.64 Aligned_cols=107 Identities=16% Similarity=0.260 Sum_probs=61.3
Q ss_pred CHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHcc
Q 036539 546 NLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADT 625 (749)
Q Consensus 546 gl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~a 625 (749)
+++.--+...++......+++-+||.-....+ ...+..+.+.......+..-.+.|+.... +..+.....+.+
T Consensus 271 ~~~~w~~~~~~~~~~~~~v~IalVGKY~~l~D----aY~Sv~eAL~hag~~~~~~v~i~wIdse~--l~~~~~~~~L~~- 343 (533)
T PRK05380 271 DLSEWEELVERLKNPKGEVTIALVGKYVELPD----AYKSVIEALKHAGIANDVKVNIKWIDSED--LEEENVAELLKG- 343 (533)
T ss_pred CHHHHHHHHHHHhCCCCceEEEEEeCccCCcH----HHHHHHHHHHHHHHHcCCeeEEEEEChhh--ccCcchhhHhhc-
Confidence 34443444444443344699999999765211 23344455555555555555677776211 111124466775
Q ss_pred CcEEEECCCC-----CCCcHHHHHHHHcCCcEEEcCccc
Q 036539 626 KGAFVQPALY-----EAFGLTVIEAMNCGLPTFATNQGG 659 (749)
Q Consensus 626 advfV~PS~~-----E~fGLtvlEAMa~GlPVVat~~GG 659 (749)
+|.+++|--+ ++.-..+-+|...|+|+++.+.|-
T Consensus 344 ~DGIIlpGGfG~~~~~g~i~~i~~a~e~~iPiLGIClGm 382 (533)
T PRK05380 344 VDGILVPGGFGERGIEGKILAIRYARENNIPFLGICLGM 382 (533)
T ss_pred CCEEEecCCCCccccccHHHHHHHHHHCCCcEEEEchHH
Confidence 8888887532 222234566778899999998775
No 280
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=20.44 E-value=75 Score=35.64 Aligned_cols=51 Identities=20% Similarity=0.266 Sum_probs=35.2
Q ss_pred cCCCcchHHHhhhcCCceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCC
Q 036539 221 QAPDPLHMEKFLSSLPILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 221 ~~p~~~~~~~~~~~~pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
.+|.+..-..|-+..+.-|||+++...|+ ... .+++.|.++|++|. ++++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~kVLVtGatG~--------------IG~-----------~l~~~Ll~~G~~V~----~l~R~ 93 (390)
T PLN02657 43 RATAAAAAQSFRSKEPKDVTVLVVGATGY--------------IGK-----------FVVRELVRRGYNVV----AVARE 93 (390)
T ss_pred cCCCccccccccccCCCCCEEEEECCCcH--------------HHH-----------HHHHHHHHCCCEEE----EEEec
Confidence 35566666677777777788888754443 211 56677888999998 77775
Done!