Query 036539
Match_columns 749
No_of_seqs 396 out of 3631
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 04:23:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036539.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036539hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s28_A Sucrose synthase 1; gly 100.0 6E-166 2E-170 1476.0 62.0 745 1-749 44-788 (816)
2 2r60_A Glycosyl transferase, g 100.0 6.2E-46 2.1E-50 422.6 34.7 432 236-730 5-459 (499)
3 3fro_A GLGA glycogen synthase; 100.0 1.8E-43 6.3E-48 391.8 36.3 401 238-729 2-429 (439)
4 3c48_A Predicted glycosyltrans 100.0 2.2E-43 7.5E-48 393.3 36.6 401 237-730 19-425 (438)
5 3vue_A GBSS-I, granule-bound s 100.0 6E-43 2.1E-47 403.0 34.0 438 238-731 9-512 (536)
6 3okp_A GDP-mannose-dependent a 100.0 1.3E-40 4.4E-45 364.2 34.9 368 237-729 3-378 (394)
7 2qzs_A Glycogen synthase; glyc 100.0 1.6E-40 5.6E-45 376.0 32.8 429 239-729 1-475 (485)
8 1rzu_A Glycogen synthase 1; gl 100.0 2.7E-40 9.1E-45 374.3 32.3 430 239-729 1-474 (485)
9 2jjm_A Glycosyl transferase, g 100.0 1.5E-39 5.2E-44 357.9 36.1 358 259-729 24-384 (394)
10 2x6q_A Trehalose-synthase TRET 100.0 1.2E-38 4.3E-43 353.2 29.1 372 238-729 40-413 (416)
11 2iw1_A Lipopolysaccharide core 100.0 5.6E-40 1.9E-44 357.0 17.5 367 239-730 1-371 (374)
12 2gek_A Phosphatidylinositol ma 100.0 8.7E-39 3E-43 351.5 26.1 364 236-730 18-383 (406)
13 3oy2_A Glycosyltransferase B73 100.0 9E-38 3.1E-42 345.6 25.2 360 239-730 1-390 (413)
14 2iuy_A Avigt4, glycosyltransfe 100.0 7.3E-37 2.5E-41 330.1 25.3 310 239-729 4-334 (342)
15 2x0d_A WSAF; GT4 family, trans 100.0 1.7E-33 5.9E-38 314.4 14.4 346 236-722 44-402 (413)
16 1f0k_A MURG, UDP-N-acetylgluco 100.0 6.8E-31 2.3E-35 285.2 25.9 340 237-729 5-356 (364)
17 3nb0_A Glycogen [starch] synth 100.0 1.1E-30 3.9E-35 299.8 23.0 337 366-731 180-634 (725)
18 2hy7_A Glucuronosyltransferase 100.0 8.5E-32 2.9E-36 299.7 9.4 245 367-729 124-378 (406)
19 2vsy_A XCC0866; transferase, g 100.0 4.9E-29 1.7E-33 287.7 24.4 173 521-729 368-558 (568)
20 3beo_A UDP-N-acetylglucosamine 100.0 4.5E-29 1.5E-33 271.7 18.5 274 367-727 95-373 (375)
21 1uqt_A Alpha, alpha-trehalose- 100.0 3.5E-28 1.2E-32 276.2 24.8 315 366-729 122-453 (482)
22 1vgv_A UDP-N-acetylglucosamine 100.0 2.5E-28 8.7E-33 266.9 15.5 286 367-731 86-377 (384)
23 2bfw_A GLGA glycogen synthase; 100.0 2.1E-27 7.3E-32 236.2 20.3 191 484-715 2-200 (200)
24 3qhp_A Type 1 capsular polysac 99.9 3.8E-26 1.3E-30 220.5 18.3 163 532-722 2-166 (166)
25 3t5t_A Putative glycosyltransf 99.9 5.5E-25 1.9E-29 248.5 25.8 320 355-728 136-471 (496)
26 1v4v_A UDP-N-acetylglucosamine 99.9 1.9E-24 6.6E-29 235.9 18.5 270 366-729 90-363 (376)
27 2f9f_A First mannosyl transfer 99.9 1.4E-23 4.9E-28 205.9 13.8 151 529-705 20-173 (177)
28 2xci_A KDO-transferase, 3-deox 99.9 2.9E-23 9.8E-28 228.6 16.9 207 429-715 148-365 (374)
29 3rhz_A GTF3, nucleotide sugar 99.8 3.2E-19 1.1E-23 193.7 22.0 248 365-725 72-331 (339)
30 3otg_A CALG1; calicheamicin, T 99.8 1.5E-19 5E-24 199.5 19.7 162 530-728 241-408 (412)
31 2iyf_A OLED, oleandomycin glyc 99.8 8.3E-18 2.8E-22 187.0 22.0 163 530-729 231-400 (430)
32 3s2u_A UDP-N-acetylglucosamine 99.8 3.5E-17 1.2E-21 179.4 26.1 254 367-728 92-356 (365)
33 3tsa_A SPNG, NDP-rhamnosyltran 99.8 4.6E-18 1.6E-22 186.5 15.0 162 531-728 218-388 (391)
34 3dzc_A UDP-N-acetylglucosamine 99.7 9.6E-18 3.3E-22 185.9 16.3 287 355-727 102-394 (396)
35 4fzr_A SSFS6; structural genom 99.7 9.2E-18 3.1E-22 184.9 14.8 156 530-725 226-397 (398)
36 3ot5_A UDP-N-acetylglucosamine 99.7 6.1E-17 2.1E-21 179.9 17.7 281 355-725 105-390 (403)
37 3oti_A CALG3; calicheamicin, T 99.7 2.8E-16 9.5E-21 173.1 19.6 157 530-727 231-396 (398)
38 3ia7_A CALG4; glycosysltransfe 99.7 1.2E-15 3.9E-20 167.3 23.5 161 530-728 230-398 (402)
39 3rsc_A CALG2; TDP, enediyne, s 99.6 2E-14 7E-19 158.7 26.2 161 530-728 246-413 (415)
40 2p6p_A Glycosyl transferase; X 99.6 1.1E-14 3.9E-19 159.1 20.7 157 531-728 210-379 (384)
41 2yjn_A ERYCIII, glycosyltransf 99.5 3E-13 1E-17 151.3 18.7 157 532-728 268-435 (441)
42 2c4m_A Glycogen phosphorylase; 99.5 1.4E-13 4.8E-18 160.8 12.7 333 367-730 289-719 (796)
43 4hwg_A UDP-N-acetylglucosamine 99.5 7.4E-13 2.5E-17 146.2 17.7 252 367-707 94-354 (385)
44 2gj4_A Glycogen phosphorylase, 99.4 1.8E-12 6E-17 152.1 20.2 232 424-681 427-707 (824)
45 1l5w_A Maltodextrin phosphoryl 99.4 2E-12 6.9E-17 151.1 18.6 333 367-730 299-730 (796)
46 3h4t_A Glycosyltransferase GTF 99.4 5.2E-12 1.8E-16 139.8 20.8 156 530-728 220-382 (404)
47 2iya_A OLEI, oleandomycin glyc 99.4 2E-11 6.8E-16 135.4 25.5 161 530-728 254-421 (424)
48 1iir_A Glycosyltransferase GTF 99.3 3.3E-11 1.1E-15 133.5 17.8 154 531-727 238-399 (415)
49 3q3e_A HMW1C-like glycosyltran 99.3 6.3E-11 2.1E-15 136.1 17.0 180 524-727 433-620 (631)
50 1rrv_A Glycosyltransferase GTF 99.2 9.1E-11 3.1E-15 129.9 17.1 152 531-726 237-399 (416)
51 4amg_A Snogd; transferase, pol 99.2 4.2E-11 1.5E-15 131.0 12.6 159 530-727 236-399 (400)
52 2o6l_A UDP-glucuronosyltransfe 99.0 1.3E-09 4.3E-14 105.4 9.4 132 531-702 21-161 (170)
53 4gyw_A UDP-N-acetylglucosamine 98.0 0.00012 4E-09 87.0 19.9 187 520-735 513-708 (723)
54 2vch_A Hydroquinone glucosyltr 97.9 0.012 4.3E-07 66.1 31.5 70 612-689 346-427 (480)
55 2pq6_A UDP-glucuronosyl/UDP-gl 97.8 0.0048 1.6E-07 69.5 27.2 151 532-710 296-453 (482)
56 2c1x_A UDP-glucose flavonoid 3 97.7 0.0019 6.4E-08 72.4 21.2 94 600-709 324-425 (456)
57 2acv_A Triterpene UDP-glucosyl 97.7 0.0092 3.1E-07 66.9 26.2 134 531-689 276-423 (463)
58 3hbf_A Flavonoid 3-O-glucosylt 97.7 0.0073 2.5E-07 67.6 24.9 145 531-709 273-427 (454)
59 1ygp_A Yeast glycogen phosphor 97.3 0.0043 1.5E-07 73.0 17.3 143 523-674 585-760 (879)
60 3hbm_A UDP-sugar hydrolase; PS 97.2 0.0054 1.9E-07 64.3 15.4 94 532-656 158-251 (282)
61 1psw_A ADP-heptose LPS heptosy 97.2 0.0098 3.4E-07 63.3 17.7 100 532-655 181-286 (348)
62 3tov_A Glycosyl transferase fa 96.6 0.18 6.2E-06 54.1 21.8 102 529-655 182-286 (349)
63 2gt1_A Lipopolysaccharide hept 87.7 1.2 4E-05 46.6 8.3 97 533-655 180-278 (326)
64 2jzc_A UDP-N-acetylglucosamine 86.2 0.56 1.9E-05 47.1 4.5 64 617-688 124-196 (224)
65 3l7i_A Teichoic acid biosynthe 74.4 15 0.0005 43.1 11.8 64 617-688 608-680 (729)
66 2dvz_A BUGE, putative exported 73.2 43 0.0015 34.9 13.9 149 533-707 116-281 (314)
67 2f5x_A BUGD; periplasmic bindi 72.1 46 0.0016 34.6 13.8 149 533-707 112-277 (312)
68 1k68_A Phytochrome response re 67.8 56 0.0019 27.9 11.6 109 564-689 3-129 (140)
69 3heb_A Response regulator rece 65.5 56 0.0019 28.9 11.3 108 564-688 5-132 (152)
70 3kht_A Response regulator; PSI 64.0 43 0.0015 29.2 10.2 111 563-690 5-127 (144)
71 3h1g_A Chemotaxis protein CHEY 62.8 72 0.0025 27.2 11.8 108 564-689 6-125 (129)
72 2qpq_A Protein BUG27; alpha/be 62.6 37 0.0013 35.1 10.6 149 533-707 103-268 (301)
73 1k66_A Phytochrome response re 61.2 71 0.0024 27.6 11.1 110 563-689 6-136 (149)
74 3to5_A CHEY homolog; alpha(5)b 60.9 62 0.0021 29.1 10.6 109 563-689 12-131 (134)
75 2zay_A Response regulator rece 59.0 83 0.0028 27.3 11.2 110 563-691 8-128 (147)
76 2pln_A HP1043, response regula 57.9 54 0.0019 28.3 9.6 105 563-689 18-131 (137)
77 3grc_A Sensor protein, kinase; 57.3 93 0.0032 26.7 12.5 109 563-690 6-126 (140)
78 4fle_A Esterase; structural ge 53.9 75 0.0026 29.4 10.4 33 365-398 60-92 (202)
79 3gt7_A Sensor protein; structu 53.5 72 0.0025 28.3 9.9 112 563-693 7-129 (154)
80 2qvg_A Two component response 53.5 80 0.0027 27.2 10.0 107 563-686 7-130 (143)
81 2phj_A 5'-nucleotidase SURE; S 51.8 73 0.0025 32.2 10.2 38 239-303 2-39 (251)
82 3jte_A Response regulator rece 51.6 1.2E+02 0.004 26.2 11.8 107 564-689 4-121 (143)
83 3h5i_A Response regulator/sens 51.6 1.2E+02 0.004 26.2 13.3 107 564-689 6-122 (140)
84 3cnb_A DNA-binding response re 49.2 1.2E+02 0.0043 25.8 10.7 110 563-690 8-129 (143)
85 1i3c_A Response regulator RCP1 49.1 1.4E+02 0.0046 26.2 12.4 110 563-689 8-135 (149)
86 3cg4_A Response regulator rece 48.9 1.3E+02 0.0044 25.8 12.6 108 563-689 7-125 (142)
87 4b4o_A Epimerase family protei 48.4 8.2 0.00028 39.4 2.6 19 278-300 15-33 (298)
88 1j9j_A Stationary phase surviV 46.8 1.3E+02 0.0044 30.3 11.1 38 239-303 1-38 (247)
89 2d59_A Hypothetical protein PH 46.0 1.7E+02 0.0058 26.4 11.4 14 278-291 40-53 (144)
90 3ius_A Uncharacterized conserv 45.9 7.7 0.00026 39.1 1.9 35 236-300 3-37 (286)
91 1y81_A Conserved hypothetical 45.4 1.2E+02 0.004 27.3 9.8 19 278-300 32-50 (138)
92 2e6c_A 5'-nucleotidase SURE; S 44.4 96 0.0033 31.2 9.7 38 239-303 1-38 (244)
93 2duw_A Putative COA-binding pr 44.1 1.1E+02 0.0037 27.8 9.5 20 278-301 31-50 (145)
94 4e7p_A Response regulator; DNA 44.1 96 0.0033 27.2 9.0 75 615-689 55-138 (150)
95 1iuk_A Hypothetical protein TT 43.1 1.1E+02 0.0038 27.5 9.3 19 278-300 31-49 (140)
96 1dbw_A Transcriptional regulat 42.6 1.4E+02 0.0048 25.0 9.6 108 563-689 3-119 (126)
97 3eul_A Possible nitrate/nitrit 42.4 1.4E+02 0.0047 26.1 9.9 111 562-689 14-133 (152)
98 3ilh_A Two component response 41.9 1.5E+02 0.005 25.4 9.8 110 563-689 9-137 (146)
99 3lkv_A Uncharacterized conserv 41.7 2.2E+02 0.0077 28.7 12.5 113 547-675 126-243 (302)
100 3n53_A Response regulator rece 41.1 1.7E+02 0.0058 25.0 10.5 75 615-689 35-120 (140)
101 1l5x_A SurviVal protein E; str 40.8 1.6E+02 0.0055 30.1 11.0 38 239-303 1-38 (280)
102 3gl9_A Response regulator; bet 40.6 1.6E+02 0.0055 24.6 9.8 106 565-689 4-120 (122)
103 2j48_A Two-component sensor ki 40.4 1.3E+02 0.0045 24.3 8.9 104 565-687 3-114 (119)
104 3kcn_A Adenylate cyclase homol 38.2 2E+02 0.0068 25.0 13.6 106 564-689 5-121 (151)
105 1jbe_A Chemotaxis protein CHEY 38.2 1.8E+02 0.006 24.3 10.5 109 563-689 4-123 (128)
106 4dad_A Putative pilus assembly 37.2 89 0.003 27.2 7.5 111 563-690 20-140 (146)
107 3c97_A Signal transduction his 36.6 2E+02 0.0069 24.6 10.3 107 564-689 11-128 (140)
108 4gi5_A Quinone reductase; prot 35.7 31 0.001 35.6 4.6 36 238-291 22-57 (280)
109 3t6k_A Response regulator rece 35.6 2.1E+02 0.0072 24.5 11.7 107 564-689 5-122 (136)
110 3eod_A Protein HNR; response r 34.8 1.4E+02 0.0049 25.1 8.4 108 563-689 7-124 (130)
111 2ixd_A LMBE-related protein; h 34.1 85 0.0029 31.3 7.5 18 282-301 26-43 (242)
112 3cg0_A Response regulator rece 33.9 2.2E+02 0.0074 24.1 10.9 108 563-689 9-126 (140)
113 2vzf_A NADH-dependent FMN redu 33.8 43 0.0015 31.9 5.1 37 237-291 1-38 (197)
114 3f6c_A Positive transcription 33.4 2.2E+02 0.0074 24.0 9.9 107 564-689 2-118 (134)
115 3hdg_A Uncharacterized protein 33.4 2.1E+02 0.0071 24.2 9.3 108 563-689 7-123 (137)
116 2qr3_A Two-component system re 33.2 1.8E+02 0.0061 24.7 8.8 107 564-689 4-124 (140)
117 3dfz_A SIRC, precorrin-2 dehyd 32.8 3.6E+02 0.012 26.4 13.1 140 549-715 42-188 (223)
118 2qzj_A Two-component response 32.4 2.4E+02 0.008 24.1 10.6 109 563-690 4-120 (136)
119 3hzh_A Chemotaxis response reg 32.3 1.4E+02 0.0049 26.3 8.3 106 564-688 37-154 (157)
120 2qxy_A Response regulator; reg 32.1 1.8E+02 0.0062 24.8 8.7 108 563-689 4-119 (142)
121 3hdv_A Response regulator; PSI 31.9 2.3E+02 0.0079 23.9 10.8 108 563-689 7-125 (136)
122 2rjn_A Response regulator rece 31.6 2.6E+02 0.0088 24.3 10.7 108 563-689 7-124 (154)
123 1uan_A Hypothetical protein TT 31.4 1.8E+02 0.0061 28.5 9.3 18 282-301 24-41 (227)
124 3lte_A Response regulator; str 31.0 2.3E+02 0.008 23.6 10.5 108 563-689 6-123 (132)
125 1mb3_A Cell division response 30.3 2.1E+02 0.007 23.6 8.6 95 587-689 14-119 (124)
126 2qsj_A DNA-binding response re 29.8 2.2E+02 0.0076 24.7 9.1 109 563-689 3-122 (154)
127 3m2p_A UDP-N-acetylglucosamine 29.7 25 0.00084 35.9 2.6 19 278-300 17-35 (311)
128 3gem_A Short chain dehydrogena 29.5 84 0.0029 31.3 6.6 19 278-300 42-60 (260)
129 1kgs_A DRRD, DNA binding respo 29.5 3.1E+02 0.01 25.6 10.6 109 564-691 3-120 (225)
130 2rdm_A Response regulator rece 29.0 2.5E+02 0.0086 23.4 11.2 106 563-689 5-121 (132)
131 3r0j_A Possible two component 29.0 2.9E+02 0.01 26.6 10.6 110 563-691 23-141 (250)
132 3lua_A Response regulator rece 29.0 1.4E+02 0.0047 25.6 7.3 107 564-689 5-125 (140)
133 3p0r_A Azoreductase; structura 28.5 53 0.0018 31.9 4.7 39 237-291 3-43 (211)
134 3ph3_A Ribose-5-phosphate isom 28.5 38 0.0013 32.1 3.5 35 234-291 16-50 (169)
135 1qkk_A DCTD, C4-dicarboxylate 28.4 2.9E+02 0.01 23.9 10.8 107 564-689 4-119 (155)
136 3cu5_A Two component transcrip 28.4 2.8E+02 0.0097 23.7 10.4 75 615-689 38-121 (141)
137 3ff4_A Uncharacterized protein 28.2 2.4E+02 0.008 24.9 8.6 88 278-394 22-109 (122)
138 3i42_A Response regulator rece 27.8 2.6E+02 0.0089 23.2 10.5 106 564-688 4-119 (127)
139 4egb_A DTDP-glucose 4,6-dehydr 27.0 2.9E+02 0.0099 28.0 10.5 14 278-291 39-52 (346)
140 3rqi_A Response regulator prot 26.6 1.7E+02 0.006 26.7 7.9 108 563-689 7-123 (184)
141 1zgz_A Torcad operon transcrip 26.5 2.7E+02 0.0091 22.8 9.8 106 565-689 4-117 (122)
142 2cp8_A NEXT to BRCA1 gene 1 pr 26.4 67 0.0023 24.6 3.8 20 179-198 2-21 (54)
143 2fzv_A Putative arsenical resi 26.3 51 0.0017 33.9 4.3 51 219-291 43-93 (279)
144 1d4a_A DT-diaphorase, quinone 25.9 69 0.0024 32.5 5.2 37 237-291 1-37 (273)
145 3m6m_D Sensory/regulatory prot 25.0 3.3E+02 0.011 23.4 9.2 107 563-688 14-133 (143)
146 3slg_A PBGP3 protein; structur 24.8 87 0.003 32.5 6.0 19 278-300 39-58 (372)
147 2q62_A ARSH; alpha/beta, flavo 24.8 86 0.003 31.4 5.6 47 227-291 22-69 (247)
148 3ew7_A LMO0794 protein; Q8Y8U8 24.5 36 0.0012 32.4 2.6 19 278-300 15-33 (221)
149 1ydw_A AX110P-like protein; st 24.5 1.3E+02 0.0043 31.6 7.1 95 533-656 7-102 (362)
150 3hv2_A Response regulator/HD d 23.9 3.5E+02 0.012 23.4 10.0 107 564-689 15-131 (153)
151 3i83_A 2-dehydropantoate 2-red 23.9 38 0.0013 35.1 2.8 19 278-300 16-34 (320)
152 3crn_A Response regulator rece 23.8 3.2E+02 0.011 22.9 10.8 107 564-689 4-119 (132)
153 3nhm_A Response regulator; pro 23.6 3.2E+02 0.011 22.8 12.7 76 615-690 36-121 (133)
154 3b2n_A Uncharacterized protein 23.5 3.3E+02 0.011 22.9 10.7 75 615-689 38-121 (133)
155 3f6p_A Transcriptional regulat 23.3 2.7E+02 0.0093 23.0 8.0 106 565-689 4-117 (120)
156 3bfv_A CAPA1, CAPB2, membrane 23.2 72 0.0024 32.3 4.7 34 147-182 6-39 (271)
157 2l2q_A PTS system, cellobiose- 23.2 89 0.003 26.9 4.7 35 236-291 2-36 (109)
158 3h2s_A Putative NADH-flavin re 23.0 40 0.0014 32.2 2.6 19 278-300 15-33 (224)
159 4h3v_A Oxidoreductase domain p 22.9 1.2E+02 0.0041 31.6 6.6 94 533-656 7-106 (390)
160 3hn2_A 2-dehydropantoate 2-red 22.9 44 0.0015 34.5 3.1 19 278-300 16-34 (312)
161 3tpc_A Short chain alcohol deh 22.9 2.2E+02 0.0076 27.7 8.3 19 278-300 22-40 (257)
162 2r25_B Osmosensing histidine p 22.7 3.5E+02 0.012 22.8 11.8 108 564-689 3-125 (133)
163 3ikm_A DNA polymerase subunit 22.6 63 0.0022 39.2 4.6 79 118-204 6-108 (1172)
164 1rcu_A Conserved hypothetical 22.6 47 0.0016 32.3 3.0 69 617-687 110-191 (195)
165 4fb5_A Probable oxidoreductase 22.5 1.5E+02 0.0052 30.8 7.4 95 532-656 25-125 (393)
166 3g17_A Similar to 2-dehydropan 22.3 38 0.0013 34.6 2.5 19 278-300 16-34 (294)
167 1p6q_A CHEY2; chemotaxis, sign 22.3 3.3E+02 0.011 22.5 8.9 108 564-689 7-125 (129)
168 2f62_A Nucleoside 2-deoxyribos 22.1 2.5E+02 0.0084 26.2 7.8 71 581-655 22-104 (161)
169 3l4b_C TRKA K+ channel protien 21.9 2.5E+02 0.0084 26.7 8.2 19 278-300 14-32 (218)
170 2hqr_A Putative transcriptiona 21.8 1.6E+02 0.0054 27.8 6.8 93 587-690 13-114 (223)
171 3c3m_A Response regulator rece 21.6 3.7E+02 0.013 22.7 9.2 107 564-689 4-121 (138)
172 1srr_A SPO0F, sporulation resp 21.3 2.9E+02 0.0099 22.8 7.8 106 564-688 4-118 (124)
173 4had_A Probable oxidoreductase 21.2 2.1E+02 0.0073 29.4 8.1 92 532-656 23-117 (350)
174 3c24_A Putative oxidoreductase 20.9 50 0.0017 33.4 3.0 19 278-300 26-44 (286)
175 2yw3_A 4-hydroxy-2-oxoglutarat 20.6 4.8E+02 0.016 25.0 10.0 91 589-689 95-198 (207)
176 3qay_A Endolysin; amidase A/B 20.5 1.5E+02 0.0053 28.0 6.2 53 239-300 2-56 (180)
177 2lpm_A Two-component response 20.3 2.3E+02 0.0077 24.9 6.9 107 563-687 8-118 (123)
178 1kjq_A GART 2, phosphoribosylg 20.3 4.1E+02 0.014 27.6 10.2 18 278-299 25-42 (391)
179 2b4a_A BH3024; flavodoxin-like 20.2 3.9E+02 0.013 22.5 10.9 106 562-687 14-127 (138)
No 1
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=100.00 E-value=5.7e-166 Score=1475.98 Aligned_cols=745 Identities=58% Similarity=1.009 Sum_probs=718.0
Q ss_pred CccchHHHHHHhhhcchhhhhhhccCcHHHHHhhcceeeeeCCeEEEEEcCCCceEEEEEEecCCcceeecCHhHhhhhh
Q 036539 1 MKLHDLMDELNEVIDDEDVRTQVLEGLLGYILCSTQEAVVMPPHVAFAIRPNPGFWEFVKVNSDDLSVEAITVTDFLKFK 80 (749)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (749)
|++|||++||+++|++ ++.++.+|+||++|++||||||.|||||||||||||+|||+|||++||+||+||++|||+||
T Consensus 44 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (816)
T 3s28_A 44 LQQNQIIAEFEALPEQ--TRKKLEGGPFFDLLKSTQEAIVLPPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFK 121 (816)
T ss_dssp EEEEHHHHHHTTTTTS--CGGGCCCSTHHHHHHTEEEEEECSSEEEEEEEEETTEEEEEEEETTSSCEEEECHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHh--hhcccccCcHHHHHHhhhheeecCCeEEEEEcCCCcceEEEEEEhhhCceeeecHHHHHHhH
Confidence 5899999999999954 45788999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCceeeecccccCCCCccCCCCCCCcchhhhhhhhhhcccCCCCCCchHHHHHhhcccCCceeeccccc
Q 036539 81 ELVFDEDWAKDENALEVDFGAYEFSLPQLTLSSSIGNGISFVSKFVTAKLSGRQDCAQPLVDYLLSLDHQGEKLMINDNL 160 (749)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (749)
|+|||+. ++++++||+||+|||++||++++|+||||||+|||||||||||+|++++++||+||+.|+|+|++|||||||
T Consensus 122 ~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (816)
T 3s28_A 122 EELVDGV-KNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFLNRHLSAKLFHDKESLLPLLKFLRLHSHQGKNLMLSEKI 200 (816)
T ss_dssp HHHHHSS-CCCTTSCEEECGGGGTTSCCCCCGGGTTBHHHHHHHHHHHHTTTCHHHHHHHHHHHHHCEETTEEBSBCTTC
T ss_pred HHhcCCC-CCCCCceEEeccccccCCCCCCCcccccCcHHHHHHHHHhhhcCChhhhHHHHHHHHHcccCCeeeeccCCc
Confidence 9999995 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCChhhHHHHHhhcCCccccCccHHHHHHHHHHHHHhhcCCCcchHHHhhhcCCceeE
Q 036539 161 NTAEKLQMALIVAEVSLSTLPKDTPYQKFELRFKEWGFEKGWGHTAERVRETMRSLSEVLQAPDPLHMEKFLSSLPILFN 240 (749)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~pm~~r 240 (749)
+|+++|++||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+++|++|||+++|+|++|+||+||
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 280 (816)
T 3s28_A 201 QNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWGDNAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFN 280 (816)
T ss_dssp CSHHHHHHHHHHHHHHHHHSCTTCBHHHHHHHHHHTTBCBCSCSBHHHHHHHHHHHHHHHHSCCHHHHHHHHHHSCCCCE
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCcCCcHHHHHHHHHHHHHHhcCCCcccHHHHhccCCceeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCcc
Q 036539 241 VVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTK 320 (749)
Q Consensus 241 Ivivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~ 320 (749)
|+|||+|||++|.+++|.||||||++||+|||||||++|+++|+++||+|+++|+|+|+.+++..|+.|+++.+.+.+++
T Consensus 281 i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~ 360 (816)
T 3s28_A 281 VVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSE 360 (816)
T ss_dssp EEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCS
T ss_pred EEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCcceeecCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred ceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEecCC
Q 036539 321 HSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAHAL 400 (749)
Q Consensus 321 ~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l 400 (749)
+++|+|+|+++..+++++|+++..+|+|+..|+..+...+....+++|||||+|++.+++++.++++++|+|+|+|.|++
T Consensus 361 gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~sglva~llar~~gvP~V~T~Hsl 440 (816)
T 3s28_A 361 YCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHAL 440 (816)
T ss_dssp SEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSCC
T ss_pred CeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcCCCEEEEEecc
Confidence 99999999999888889999999999999999988888888877779999999999999999999999999999999999
Q ss_pred cccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCc
Q 036539 401 EKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480 (749)
Q Consensus 401 ~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~k 480 (749)
...++..++.+|+.....|++.+++.+|+.+++.||.|||+|.++++.+.+.+++|..+.+|++|++|++++|++.+++|
T Consensus 441 ~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~k 520 (816)
T 3s28_A 441 EKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPK 520 (816)
T ss_dssp HHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTT
T ss_pred cccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCC
Confidence 98888888889999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred eEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHcc
Q 036539 481 FNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRL 560 (749)
Q Consensus 481 i~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~ 560 (749)
+.|||||+|.+.|.|......++...++.++..+|++.+.++.+|++.++++++|+|+||+++.||++.|++|++++.+.
T Consensus 521 i~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~ 600 (816)
T 3s28_A 521 FNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRL 600 (816)
T ss_dssp EEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHH
T ss_pred EEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhh
Confidence 99999999999999988777778888899999999999999999998888999999999999999999999999999887
Q ss_pred CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcH
Q 036539 561 RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGL 640 (749)
Q Consensus 561 ~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGL 640 (749)
+++++|+|+|+|++ ..+.++++.++.+++.++++++++.++|+|+|++++.++.+++++++++++|+||+||.+|+||+
T Consensus 601 ~~~v~LvIvG~g~~-~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~Egfgl 679 (816)
T 3s28_A 601 RELANLVVVGGDRR-KESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGL 679 (816)
T ss_dssp HHHCEEEEECCCTT-SCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCH
T ss_pred CCCeEEEEEeCCCc-ccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccH
Confidence 78899999999986 67788899999999999999999999999999888888889999999976899999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 036539 641 TVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYA 720 (749)
Q Consensus 641 tvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a 720 (749)
+++|||+||+|||+|+.||+.|++.++.+|++++|+|++++|++|.++++++..|++.+++|+++|++++.++|||+.++
T Consensus 680 vllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a 759 (816)
T 3s28_A 680 TVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYS 759 (816)
T ss_dssp HHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHH
T ss_pred HHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 99999999999999999999999999999999999999999999999888888999999999999999999999999999
Q ss_pred HHHHHHHHHhHhHHhhhhhhhHHhhhccC
Q 036539 721 NKMLNMGCMYSFWKQLNKGQKLAKQRYIE 749 (749)
Q Consensus 721 ~~ll~ly~~~~~~~~~~~~~~~~~~~~~~ 749 (749)
++++++|+.||||+++++++|++++||||
T Consensus 760 ~~ll~lY~~~g~wk~vs~~~r~~~~ryle 788 (816)
T 3s28_A 760 QRLLTLTGVYGFWKHVSNLDRLEARRYLE 788 (816)
T ss_dssp HHHHHHHHHHHHHHHHHTTTHHHHHHHHH
T ss_pred HHHHHHHHHHhHhhhcchhhhHHHHHHHH
Confidence 99999999999999999999999999986
No 2
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=6.2e-46 Score=422.61 Aligned_cols=432 Identities=28% Similarity=0.476 Sum_probs=313.1
Q ss_pred CceeEEEEEcccccCCCcc--cCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCcc
Q 036539 236 PILFNVVIFSPHGYFGQAD--VLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQEL 313 (749)
Q Consensus 236 pm~~rIvivs~h~~~~~~~--~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~ 313 (749)
.|.|||++++.+++|...+ +.+.|..||.+.++. +|++.|+++||+|+ |+|..........+....
T Consensus 5 ~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~~~~~~ 72 (499)
T 2r60_A 5 TRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVK--------EVSLALAEMGVQVD----IITRRIKDENWPEFSGEI 72 (499)
T ss_dssp --CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHH--------HHHHHHHHTTCEEE----EEEECCCBTTBGGGCCSE
T ss_pred cccceEEEEecCCCccccccccCCCCCCCCeeehHH--------HHHHHHHhcCCeEE----EEeCCCCcccccchhhhH
Confidence 4568999999999885422 245678899999999 66777899999999 888653221101122222
Q ss_pred ccccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcE
Q 036539 314 EPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQ 393 (749)
Q Consensus 314 e~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~ 393 (749)
+......++.++++|..... +..+..+|.++..+...+.+.+.+. ..+|||||+|++..++++.++++..++|+
T Consensus 73 ~~~~~~~gv~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~Divh~~~~~~~~~~~~~~~~~~~p~ 146 (499)
T 2r60_A 73 DYYQETNKVRIVRIPFGGDK-----FLPKEELWPYLHEYVNKIINFYREE-GKFPQVVTTHYGDGGLAGVLLKNIKGLPF 146 (499)
T ss_dssp EECTTCSSEEEEEECCSCSS-----CCCGGGCGGGHHHHHHHHHHHHHHH-TCCCSEEEEEHHHHHHHHHHHHHHHCCCE
T ss_pred HhccCCCCeEEEEecCCCcC-----CcCHHHHHHHHHHHHHHHHHHHHhc-CCCCCEEEEcCCcchHHHHHHHHhcCCcE
Confidence 22211246889999875431 2233445666555555555444442 24899999998776777888888899999
Q ss_pred EEEecCCcccccCC---CcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhh
Q 036539 394 ATIAHALEKTKYED---SDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRV 470 (749)
Q Consensus 394 v~t~H~l~~~k~~~---s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v 470 (749)
|++.|+........ .......+...+++......++..++.+|.||++|...++...+. .
T Consensus 147 v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~-----------------~ 209 (499)
T 2r60_A 147 TFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSH-----------------D 209 (499)
T ss_dssp EEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTS-----------------G
T ss_pred EEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhh-----------------h
Confidence 99999974322110 000000111112222233456778899999999998877622111 0
Q ss_pred hcc-C----CCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcC-----ccCCCCCcEEEEEec
Q 036539 471 VKG-I----DVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIG-----YLADRKKPIIFSMAR 540 (749)
Q Consensus 471 ~~G-i----~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g-----~l~~~~k~vIl~vGR 540 (749)
..| + + ..++.|||||+|.+.|.+......+ ...++.+| + ++++++|+|+||
T Consensus 210 ~~g~~~~~~~--~~ki~vi~ngvd~~~~~~~~~~~~~---------------~~~r~~~~~~~~~~--~~~~~~i~~vGr 270 (499)
T 2r60_A 210 LYRGAVNVED--DDKFSVIPPGVNTRVFDGEYGDKIK---------------AKITKYLERDLGSE--RMELPAIIASSR 270 (499)
T ss_dssp GGTTTCCTTC--GGGEEECCCCBCTTTSSSCCCHHHH---------------HHHHHHHHHHSCGG--GTTSCEEEECSC
T ss_pred cccccccccC--CCCeEEECCCcChhhcCccchhhhH---------------HHHHHHhccccccc--CCCCcEEEEeec
Confidence 012 2 2 5689999999999988776431111 01123345 4 567889999999
Q ss_pred ccCCCCHHHHHHHHHHhHccCCC-eEEEEEeccCCCCC---CcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChH
Q 036539 541 LDVVKNLTGLTEWYGKNKRLRNL-VNLVIVGAFFDPSK---SKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNG 616 (749)
Q Consensus 541 L~~~Kgl~~LieA~~~l~~~~~~-v~LvIVG~g~~~~~---~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~ 616 (749)
+.+.||++.|++|+.++.+..++ +.|+|+|++..+.. ..+.++.++.++++++++++++.++|.|+| .++.+
T Consensus 271 l~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G----~v~~~ 346 (499)
T 2r60_A 271 LDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFP----LNSQQ 346 (499)
T ss_dssp CCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEE----CCSHH
T ss_pred CccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECC----CCCHH
Confidence 99999999999999998765444 58999998432100 001234455788999999999999999999 77789
Q ss_pred HHHHHHHccC----cEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHh
Q 036539 617 ELYRCIADTK----GAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEAC 692 (749)
Q Consensus 617 el~~~la~aa----dvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l 692 (749)
++..+|+. + |++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.++
T Consensus 347 ~~~~~~~~-a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~l---- 421 (499)
T 2r60_A 347 ELAGCYAY-LASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKA---- 421 (499)
T ss_dssp HHHHHHHH-HHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHH----
T ss_pred HHHHHHHh-cCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHH----
Confidence 99999995 9 99999999999999999999999999999999999999999999999999999999999654
Q ss_pred cCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 693 KVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 693 ~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
++|++.+++|+++|++++.++|||+.++++++++|+..
T Consensus 422 l~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~ 459 (499)
T 2r60_A 422 FESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEI 459 (499)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHH
T ss_pred HhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 48999999999999999988899999999999998754
No 3
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=1.8e-43 Score=391.84 Aligned_cols=401 Identities=16% Similarity=0.148 Sum_probs=296.7
Q ss_pred eeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCcc------C-
Q 036539 238 LFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKC------N- 310 (749)
Q Consensus 238 ~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~------~- 310 (749)
.|||++++.+.+| +..||.+.++. +|+++|+++||+|+ |+|+..+....... .
T Consensus 2 ~MkIl~v~~~~~p--------~~~gG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~~~~~~~~~~ 61 (439)
T 3fro_A 2 HMKVLLLGFEFLP--------VKVGGLAEALT--------AISEALASLGHEVL----VFTPSHGRFQGEEIGKIRVFGE 61 (439)
T ss_dssp CCEEEEECSCCTT--------SCSSSHHHHHH--------HHHHHHHHTTCEEE----EEEECTTCSCCEEEEEEEETTE
T ss_pred ceEEEEEecccCC--------cccCCHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCchhhhhccccccCc
Confidence 5899999988775 25799999999 77777899999999 99976544321100 0
Q ss_pred -Cccccc-cCccceEEEEecCccCCcccccccccccccc-chH-------HHHHHHHHHHHHHc--CCCceEEEEcCCCc
Q 036539 311 -QELEPI-EGTKHSNILRVPFKTDKGILHRWVSRFDVYP-YLE-------GFAQDATTMILEFL--GGKPDLIIGNYSDG 378 (749)
Q Consensus 311 -~~~e~i-~~~~~~~I~rvp~~~~~~~~~~~isr~~i~p-yl~-------~f~~~~~~~l~~~l--~~~pDIIh~h~~~~ 378 (749)
...... ....++.+++++. .. ..+..+++ +.. .|...+.+.+...+ ..+|||||+|++..
T Consensus 62 ~~~~~~~~~~~~gv~v~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~ 133 (439)
T 3fro_A 62 EVQVKVSYEERGNLRIYRIGG-GL-------LDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHT 133 (439)
T ss_dssp EEEEEEEEEEETTEEEEEEES-GG-------GGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGG
T ss_pred ccceeeeeccCCCceEEEecc-hh-------ccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhh
Confidence 000000 0223678888876 21 12223332 111 23333333333331 56999999999888
Q ss_pred hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCcccc
Q 036539 379 NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYES 458 (749)
Q Consensus 379 ~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~ 458 (749)
++++.++++..++|+|++.|+.....++........+.. ..+......++..++.+|.|+++|...++. . +
T Consensus 134 ~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~---~---~-- 204 (439)
T 3fro_A 134 VFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSE-LAPYPDIDPEHTGGYIADIVTTVSRGYLID---E---W-- 204 (439)
T ss_dssp HHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGG-GCCSSEECHHHHHHHHCSEEEESCHHHHHH---T---H--
T ss_pred hhhHHHHhhccCCCEEEEecccccccCchHHhCcccccc-ccccceeeHhhhhhhhccEEEecCHHHHHH---H---h--
Confidence 888888888899999999999854332211110011100 001122245667889999999999887662 0 0
Q ss_pred ccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCc----hHHhhhhccchhhHHhhccccchhhhcCccCCCCCcE
Q 036539 459 HTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYT----EKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPI 534 (749)
Q Consensus 459 ~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~----~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~v 534 (749)
-..+++ ..++.+||||+|.+.|.|.. .... ....++.+|+ +++ ++
T Consensus 205 -----------~~~~~~--~~~i~vi~ngvd~~~~~~~~~~~~~~~~---------------~~~~~~~~~~--~~~-~~ 253 (439)
T 3fro_A 205 -----------GFFRNF--EGKITYVFNGIDCSFWNESYLTGSRDER---------------KKSLLSKFGM--DEG-VT 253 (439)
T ss_dssp -----------HHHGGG--TTSEEECCCCCCTTTSCGGGSCSCHHHH---------------HHHHHHHHTC--CSC-EE
T ss_pred -----------hhhhhc--CCceeecCCCCCchhcCcccccchhhhh---------------HHHHHHHcCC--CCC-cE
Confidence 000123 77999999999999987752 1111 1123456777 555 99
Q ss_pred EEEEeccc-CCCCHHHHHHHHHHhHccC--CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC
Q 036539 535 IFSMARLD-VVKNLTGLTEWYGKNKRLR--NLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD 611 (749)
Q Consensus 535 Il~vGRL~-~~Kgl~~LieA~~~l~~~~--~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 611 (749)
|+|+||+. +.||++.+++|+.++.+.. ++++|+|+|+|+. .+.+.+++++++++ +.+.|.|
T Consensus 254 i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~----------~~~~~l~~~~~~~~--~~~~~~g---- 317 (439)
T 3fro_A 254 FMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP----------ELEGWARSLEEKHG--NVKVITE---- 317 (439)
T ss_dssp EEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCH----------HHHHHHHHHHHHCT--TEEEECS----
T ss_pred EEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCCh----------hHHHHHHHHHhhcC--CEEEEcC----
Confidence 99999999 9999999999999998866 7999999999875 34478889999988 7788888
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHH
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEA 691 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~ 691 (749)
.++.+++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++ +|++++++|+++++++|.+++
T Consensus 318 ~~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll-- 393 (439)
T 3fro_A 318 MLSREFVRELYGS-VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKAL-- 393 (439)
T ss_dssp CCCHHHHHHHHTT-CSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEECTTCHHHHHHHHHHHH--
T ss_pred CCCHHHHHHHHHH-CCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEeCCCCHHHHHHHHHHHH--
Confidence 7888999999995 999999999999999999999999999999999999999887 999999999999999997655
Q ss_pred hcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 692 CKV-DPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 692 l~~-dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+ |++.+++|++++++++ ++|||+.++++++++|+.
T Consensus 394 --~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 394 --ELSRSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTG 429 (439)
T ss_dssp --HHTTTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHT
T ss_pred --hcCHHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHH
Confidence 5 8999999999999999 789999999999998864
No 4
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=2.2e-43 Score=393.33 Aligned_cols=401 Identities=19% Similarity=0.266 Sum_probs=293.5
Q ss_pred ceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccc
Q 036539 237 ILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPI 316 (749)
Q Consensus 237 m~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i 316 (749)
.+|||++++.+++|.. .+|.+..||.+.++. +|++.|+++||+|+ |+|....... ......
T Consensus 19 ~mmkIl~i~~~~~p~~--~~~~~~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~-----~~~~~~ 79 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQ--QPGTGDSGGMNVYIL--------STATELAKQGIEVD----IYTRATRPSQ-----GEIVRV 79 (438)
T ss_dssp CCCEEEEECTTSCTTC--C-------CHHHHHH--------HHHHHHHHTTCEEE----EEEECCCGGG-----CSEEEE
T ss_pred chheeeeEEeeccccc--cCCCCCCCCHHHHHH--------HHHHHHHhcCCEEE----EEecCCCCCC-----cccccc
Confidence 4589999998887632 234557899999999 67777889999999 8886532110 011111
Q ss_pred cCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEE
Q 036539 317 EGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATI 396 (749)
Q Consensus 317 ~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t 396 (749)
..++.+++++.....+ .++..++.++..|...+.+...+. ..+||+||+|++..+.++.++++..++|++.+
T Consensus 80 --~~~v~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~ 151 (438)
T 3c48_A 80 --AENLRVINIAAGPYEG-----LSKEELPTQLAAFTGGMLSFTRRE-KVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHT 151 (438)
T ss_dssp --ETTEEEEEECCSCSSS-----CCGGGGGGGHHHHHHHHHHHHHHH-TCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEE
T ss_pred --cCCeEEEEecCCCccc-----cchhHHHHHHHHHHHHHHHHHHhc-cCCCCEEEeCCccHHHHHHHHHHHcCCCEEEE
Confidence 1367888887654321 223334444455554444442332 22499999998766777777888889999999
Q ss_pred ecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCC
Q 036539 397 AHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDV 476 (749)
Q Consensus 397 ~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~ 476 (749)
.|+........ +..... .........++..++.+|.||++|....+. +....|++
T Consensus 152 ~h~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~-------------------~~~~~g~~- 206 (438)
T 3c48_A 152 AHTLAAVKNSY----RDDSDT-PESEARRICEQQLVDNADVLAVNTQEEMQD-------------------LMHHYDAD- 206 (438)
T ss_dssp CSSCHHHHSCC--------CC-HHHHHHHHHHHHHHHHCSEEEESSHHHHHH-------------------HHHHHCCC-
T ss_pred ecCCccccccc----ccccCC-cchHHHHHHHHHHHhcCCEEEEcCHHHHHH-------------------HHHHhCCC-
Confidence 99874322110 000000 000111234566789999999999887661 11112444
Q ss_pred CCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHH
Q 036539 477 LDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGK 556 (749)
Q Consensus 477 ~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~ 556 (749)
..++.+||||+|.+.|.+...... ...++.+|+ +.++++|+++||+.+.||++.+++|+.+
T Consensus 207 -~~k~~vi~ngvd~~~~~~~~~~~~----------------~~~r~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~~ 267 (438)
T 3c48_A 207 -PDRISVVSPGADVELYSPGNDRAT----------------ERSRRELGI--PLHTKVVAFVGRLQPFKGPQVLIKAVAA 267 (438)
T ss_dssp -GGGEEECCCCCCTTTSCCC----C----------------HHHHHHTTC--CSSSEEEEEESCBSGGGCHHHHHHHHHH
T ss_pred -hhheEEecCCccccccCCcccchh----------------hhhHHhcCC--CCCCcEEEEEeeecccCCHHHHHHHHHH
Confidence 678999999999998876533210 011244666 6678899999999999999999999999
Q ss_pred hHccCC--CeEEEEEec----cCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEE
Q 036539 557 NKRLRN--LVNLVIVGA----FFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFV 630 (749)
Q Consensus 557 l~~~~~--~v~LvIVG~----g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV 630 (749)
+.+..| +++|+|+|+ |+. .+.++++++++++.++|.|+| .++.+++..+|+. +|++|
T Consensus 268 l~~~~p~~~~~l~i~G~~~~~g~~------------~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~~~~-adv~v 330 (438)
T 3c48_A 268 LFDRDPDRNLRVIICGGPSGPNAT------------PDTYRHMAEELGVEKRIRFLD----PRPPSELVAVYRA-ADIVA 330 (438)
T ss_dssp HHHHCTTCSEEEEEECCBC------------------CHHHHHHHHTTCTTTEEEEC----CCCHHHHHHHHHH-CSEEE
T ss_pred HHhhCCCcceEEEEEeCCCCCCcH------------HHHHHHHHHHcCCCCcEEEcC----CCChHHHHHHHHh-CCEEE
Confidence 988766 799999998 433 567888999999999999999 7778899999995 99999
Q ss_pred ECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 036539 631 QPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRI 710 (749)
Q Consensus 631 ~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v 710 (749)
+||.+|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++++
T Consensus 331 ~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~~ 406 (438)
T 3c48_A 331 VPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLL----DDDETRIRMGEDAVEHA 406 (438)
T ss_dssp ECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHH
T ss_pred ECccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999996654 69999999999999999
Q ss_pred HHhCCHHHHHHHHHHHHHHh
Q 036539 711 NECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 711 ~~~ysw~~~a~~ll~ly~~~ 730 (749)
.+ |||+.++++++++|+..
T Consensus 407 ~~-~s~~~~~~~~~~~~~~~ 425 (438)
T 3c48_A 407 RT-FSWAATAAQLSSLYNDA 425 (438)
T ss_dssp HH-HHHHHHHHHHHHHHHHH
T ss_pred Hh-CCHHHHHHHHHHHHHHH
Confidence 77 99999999999988643
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=6e-43 Score=403.04 Aligned_cols=438 Identities=16% Similarity=0.163 Sum_probs=287.2
Q ss_pred eeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccc-
Q 036539 238 LFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPI- 316 (749)
Q Consensus 238 ~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i- 316 (749)
-|||++||...+|- -.|||...++. .|+++|+++||+|. |+++.++.-....-......+
T Consensus 9 ~MkIl~vs~E~~P~-------~K~GGLadvv~--------~L~~aL~~~G~~V~----Vi~P~Y~~~~~~~~~~~~~~~~ 69 (536)
T 3vue_A 9 HMNVVFVGAEMAPW-------SKTGGLGDVLG--------GLPPAMAANGHRVM----VISPRYDQYKDAWDTSVVAEIK 69 (536)
T ss_dssp CCEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCSCCTTCEEEEEEEEEE
T ss_pred CcEEEEEEEeccch-------hccCcHHHHHH--------HHHHHHHHcCCeEE----EEecCchhhhhhcccceEEEEE
Confidence 48999999888753 36899888888 66777899999999 999877543211000000000
Q ss_pred --cCccceEEEEecCccCCc-ccc--ccccc------cccc------cc---hHHHH--HHHHHHHHHHc----------
Q 036539 317 --EGTKHSNILRVPFKTDKG-ILH--RWVSR------FDVY------PY---LEGFA--QDATTMILEFL---------- 364 (749)
Q Consensus 317 --~~~~~~~I~rvp~~~~~~-~~~--~~isr------~~i~------py---l~~f~--~~~~~~l~~~l---------- 364 (749)
.....+.+.+.+...-.- ++. .+..| ..++ +| .++|+ ..+..++...+
T Consensus 70 ~~~~~~~~~~~~~~~~gv~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~ 149 (536)
T 3vue_A 70 VADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKG 149 (536)
T ss_dssp ETTEEEEEEEEECEETTEEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCS
T ss_pred ecCceEEEEEEEEEECCceEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhc
Confidence 000112222221110000 000 00001 0111 11 12222 12222333322
Q ss_pred -CCCceEEEEcCCCchHHHHHHHHc-------CCCcEEEEecCCccccc-CCC-----cchhh---h--c---Ccccccc
Q 036539 365 -GGKPDLIIGNYSDGNLVASVMASK-------LGITQATIAHALEKTKY-EDS-----DVKWK---E--L---DPKYHFS 422 (749)
Q Consensus 365 -~~~pDIIh~h~~~~~lva~lla~~-------~gvp~v~t~H~l~~~k~-~~s-----~~~~~---~--~---~~~y~f~ 422 (749)
.+.+||+|+|+|.+++++.+++.. .++|+|+|+|++..... +.. ...+. . + .....+.
T Consensus 150 ~~~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (536)
T 3vue_A 150 TYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEG 229 (536)
T ss_dssp CCCSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCE
T ss_pred cCCCCEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccc
Confidence 245789999999998888877654 37899999998743321 100 00000 0 0 0011112
Q ss_pred hhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhh
Q 036539 423 CQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRR 502 (749)
Q Consensus 423 ~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r 502 (749)
......+..+..||.|+|+|+..++.+....+.-. .+. .... ..++.+|+||||.+.|.|.++....
T Consensus 230 ~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~-----~l~------~~~~--~~~i~~I~NGiD~~~~~p~~d~~~~ 296 (536)
T 3vue_A 230 RKINWMKAGILEADRVLTVSPYYAEELISGIARGC-----ELD------NIMR--LTGITGIVNGMDVSEWDPSKDKYIT 296 (536)
T ss_dssp EEEEHHHHHHHHCSEEEESCHHHHHHHHTTCCCCS-----SSC------CCSC--CCSCEECCCCCCTTTSCTTTCSSSS
T ss_pred cchhHHHHHHHhccEEEEcCHHHhhhhhccccccc-----ccc------cccc--cCCeEEEECCcchhhcCCCCccccc
Confidence 23344667889999999999987774432211100 000 0011 5689999999999999886532111
Q ss_pred hhc-cchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcch
Q 036539 503 LTK-FHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDR 581 (749)
Q Consensus 503 l~~-~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ 581 (749)
... .....+.+..++....+.+|+..+++.|+|+++||+++.||++.|++|+.++.+ .+.+|+|+|.|..
T Consensus 297 ~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~--~~~~l~l~G~G~~------- 367 (536)
T 3vue_A 297 AKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQ--EDVQIVLLGTGKK------- 367 (536)
T ss_dssp CCCCTTTHHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTT--SSCEEEEECCBCH-------
T ss_pred cccchhhhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHh--hCCeEEEEeccCc-------
Confidence 000 001122233334445567888778899999999999999999999999999976 4679999999865
Q ss_pred hHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccc
Q 036539 582 EETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPA 661 (749)
Q Consensus 582 ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~ 661 (749)
.....++..+..+ .+++.+.+ ..+.+++..+|+. +|+||+||.+|+||++++|||+||+|||+|+.||++
T Consensus 368 ---~~~~~~~~~~~~~--~~~v~~~~----~~~~~~~~~~~~~-aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~ 437 (536)
T 3vue_A 368 ---KFEKLLKSMEEKY--PGKVRAVV----KFNAPLAHLIMAG-ADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLV 437 (536)
T ss_dssp ---HHHHHHHHHHHHS--TTTEEEEC----SCCHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHH
T ss_pred ---hHHHHHHHHHhhc--CCceEEEE----eccHHHHHHHHHh-hheeecccccCCCCHHHHHHHHcCCCEEEcCCCCch
Confidence 2334455555554 47899999 7778899999994 999999999999999999999999999999999999
Q ss_pred cccccCceEE----------EECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhH
Q 036539 662 EIIVDGVSGF----------HIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMYS 731 (749)
Q Consensus 662 EiI~dg~~G~----------lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~~ 731 (749)
|+|.||++|| +++|.|+++++++|.+++. +..++ .|++|.++|+ .++|||+.+|++|+++|+..+
T Consensus 438 e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~-~~~~~-~~~~~~~~am---~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 438 DTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK-VVGTP-AYEEMVRNCM---NQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp HHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH-HTTSH-HHHHHHHHHH---HSCCSSHHHHHHHHHHHHTTC
T ss_pred heeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHH-hcCcH-HHHHHHHHHH---HhcCCHHHHHHHHHHHHHHhh
Confidence 9999999999 6788899999999988774 44555 5788887775 468999999999999998764
No 6
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=1.3e-40 Score=364.16 Aligned_cols=368 Identities=18% Similarity=0.275 Sum_probs=280.2
Q ss_pred ceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccc
Q 036539 237 ILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPI 316 (749)
Q Consensus 237 m~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i 316 (749)
++|||++++++.. |..||.+.++. .|++.| +||+|+ |+|...+... ....
T Consensus 3 ~~mkIl~v~~~~~---------p~~gG~~~~~~--------~l~~~L--~g~~v~----v~~~~~~~~~-------~~~~ 52 (394)
T 3okp_A 3 ASRKTLVVTNDFP---------PRIGGIQSYLR--------DFIATQ--DPESIV----VFASTQNAEE-------AHAY 52 (394)
T ss_dssp -CCCEEEEESCCT---------TSCSHHHHHHH--------HHHTTS--CGGGEE----EEEECSSHHH-------HHHH
T ss_pred CCceEEEEeCccC---------CccchHHHHHH--------HHHHHh--cCCeEE----EEECCCCccc-------hhhh
Confidence 3589999997765 34699999999 566666 699999 8887633210 0111
Q ss_pred cCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCc-EEE
Q 036539 317 EGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGIT-QAT 395 (749)
Q Consensus 317 ~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp-~v~ 395 (749)
....++.+++++.... ++. ..+...+.+.+.+ .+||+||+|..........++++.++| ++.
T Consensus 53 ~~~~~~~~~~~~~~~~-------------~~~-~~~~~~l~~~~~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~ 115 (394)
T 3okp_A 53 DKTLDYEVIRWPRSVM-------------LPT-PTTAHAMAEIIRE---REIDNVWFGAAAPLALMAGTAKQAGASKVIA 115 (394)
T ss_dssp HTTCSSEEEEESSSSC-------------CSC-HHHHHHHHHHHHH---TTCSEEEESSCTTGGGGHHHHHHTTCSEEEE
T ss_pred ccccceEEEEcccccc-------------ccc-hhhHHHHHHHHHh---cCCCEEEECCcchHHHHHHHHHhcCCCcEEE
Confidence 1223578888876432 111 1233333333333 389999999877644444556778887 888
Q ss_pred EecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCC
Q 036539 396 IAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGID 475 (749)
Q Consensus 396 t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~ 475 (749)
+.|+... .|... . ......+..++.+|.|+++|....+.. ....+ .
T Consensus 116 ~~h~~~~--------~~~~~-~-----~~~~~~~~~~~~~d~ii~~s~~~~~~~-------------------~~~~~-~ 161 (394)
T 3okp_A 116 STHGHEV--------GWSML-P-----GSRQSLRKIGTEVDVLTYISQYTLRRF-------------------KSAFG-S 161 (394)
T ss_dssp ECCSTHH--------HHTTS-H-----HHHHHHHHHHHHCSEEEESCHHHHHHH-------------------HHHHC-S
T ss_pred Eeccchh--------hhhhc-c-----hhhHHHHHHHHhCCEEEEcCHHHHHHH-------------------HHhcC-C
Confidence 9997532 11100 0 111223456789999999998876611 11112 2
Q ss_pred CCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHH
Q 036539 476 VLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYG 555 (749)
Q Consensus 476 ~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~ 555 (749)
..++.+||||+|.+.|.|....... ..++.+|+ ++++++|+|+||+.+.||++.+++|+.
T Consensus 162 --~~~~~vi~ngv~~~~~~~~~~~~~~----------------~~~~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~ 221 (394)
T 3okp_A 162 --HPTFEHLPSGVDVKRFTPATPEDKS----------------ATRKKLGF--TDTTPVIACNSRLVPRKGQDSLIKAMP 221 (394)
T ss_dssp --SSEEEECCCCBCTTTSCCCCHHHHH----------------HHHHHTTC--CTTCCEEEEESCSCGGGCHHHHHHHHH
T ss_pred --CCCeEEecCCcCHHHcCCCCchhhH----------------HHHHhcCC--CcCceEEEEEeccccccCHHHHHHHHH
Confidence 5789999999999999874433211 12355676 677799999999999999999999999
Q ss_pred HhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCC
Q 036539 556 KNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALY 635 (749)
Q Consensus 556 ~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~ 635 (749)
++.+..++++|+|+|+|+. .+.+++++ .++.++|.|+| .++.+++..+|+. +|++|+||.+
T Consensus 222 ~l~~~~~~~~l~i~G~g~~------------~~~l~~~~--~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~v~ps~~ 282 (394)
T 3okp_A 222 QVIAARPDAQLLIVGSGRY------------ESTLRRLA--TDVSQNVKFLG----RLEYQDMINTLAA-ADIFAMPART 282 (394)
T ss_dssp HHHHHSTTCEEEEECCCTT------------HHHHHHHT--GGGGGGEEEEE----SCCHHHHHHHHHH-CSEEEECCCC
T ss_pred HHHhhCCCeEEEEEcCchH------------HHHHHHHH--hcccCeEEEcC----CCCHHHHHHHHHh-CCEEEecCcc
Confidence 9988888999999999977 56677777 56778999999 7788999999995 9999999999
Q ss_pred -------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 036539 636 -------EAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLK 708 (749)
Q Consensus 636 -------E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~ 708 (749)
|+||++++|||+||+|||+|+.||..|++.++ +|++++++|+++++++|.++ .+|++.+++|++++++
T Consensus 283 ~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l----~~~~~~~~~~~~~~~~ 357 (394)
T 3okp_A 283 RGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIEL----LDDPIRRAAMGAAGRA 357 (394)
T ss_dssp BGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred ccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHH----HhCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 99999999999999999654 4899999999999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHH
Q 036539 709 RINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 709 ~v~~~ysw~~~a~~ll~ly~~ 729 (749)
++.++|||+.++++++++|+.
T Consensus 358 ~~~~~~s~~~~~~~~~~~~~~ 378 (394)
T 3okp_A 358 HVEAEWSWEIMGERLTNILQS 378 (394)
T ss_dssp HHHHHTBHHHHHHHHHHHHHS
T ss_pred HHHHhCCHHHHHHHHHHHHHH
Confidence 998899999999999998863
No 7
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=1.6e-40 Score=376.02 Aligned_cols=429 Identities=17% Similarity=0.150 Sum_probs=280.5
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCc----------
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTK---------- 308 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~---------- 308 (749)
|||++++.+.+|. +..||.+.++. +|+++|+++||+|+ |+|...+......
T Consensus 1 MkIl~v~~~~~P~-------~~~GG~~~~~~--------~la~~L~~~G~~V~----vi~~~~~~~~~~~~~~~~~~~~~ 61 (485)
T 2qzs_A 1 MQVLHVCSEMFPL-------LKTGGLADVIG--------ALPAAQIADGVDAR----VLLPAFPDIRRGVTDAQVVSRRD 61 (485)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHHTTCEEE----EEEECCHHHHHHCTTCEEEEEEC
T ss_pred CeEEEEeeecccc-------ccCCcHHHHHH--------HHHHHHHHcCCEEE----EEecCccccccccccceeEEEec
Confidence 7999999777652 24699999999 67777899999999 8886532210000
Q ss_pred -cCCccccc-cCccceEEEEecCccCCcccccccccc--ccccc----hHHHHHHHHHHHHHHcC--CCceEEEEcCCCc
Q 036539 309 -CNQELEPI-EGTKHSNILRVPFKTDKGILHRWVSRF--DVYPY----LEGFAQDATTMILEFLG--GKPDLIIGNYSDG 378 (749)
Q Consensus 309 -~~~~~e~i-~~~~~~~I~rvp~~~~~~~~~~~isr~--~i~py----l~~f~~~~~~~l~~~l~--~~pDIIh~h~~~~ 378 (749)
.....+.. ....++.+++++............... .-|+. +..+...+ ..+.+.+. .+|||||+|.+..
T Consensus 62 ~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Divh~~~~~~ 140 (485)
T 2qzs_A 62 TFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVG-AEMASGLDPFWRPDVVHAHDWHA 140 (485)
T ss_dssp CTTCCEEEEEEEETTEEEEEEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHH-HHHTTTSSTTCCCSEEEEETGGG
T ss_pred ccCCcEEEEEEEECCcEEEEEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHH-HHHHHHhccCCCCCEEEeeccch
Confidence 00000000 001357777776321000000000000 00110 01122222 22222222 5899999999777
Q ss_pred hHHHHHHH-HcCCCcEEEEecCCccccc-CCCcc-----hhhhcCc-ccccchhhhHHHHHhhhCCEEEeCCHHHHhhcC
Q 036539 379 NLVASVMA-SKLGITQATIAHALEKTKY-EDSDV-----KWKELDP-KYHFSCQFIADTIAMNATDFIIASTFQEIAGSK 450 (749)
Q Consensus 379 ~lva~lla-~~~gvp~v~t~H~l~~~k~-~~s~~-----~~~~~~~-~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~ 450 (749)
++++.+++ +..++|+|++.|+...... ..... .+..+.. ...+......++..++.+|.||++|...++...
T Consensus 141 ~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~ 220 (485)
T 2qzs_A 141 GLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREIT 220 (485)
T ss_dssp TTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTT
T ss_pred hHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHHHh
Confidence 77777777 6789999999999742211 00000 0000000 000111123456678999999999988776221
Q ss_pred CCCCccccccccccccchhhhccCCC------CC--CceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhh
Q 036539 451 DRPGQYESHTAFTLPGLCRVVKGIDV------LD--PKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNE 522 (749)
Q Consensus 451 ~~~~qye~~~~~~~p~ly~v~~Gi~~------~~--~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 522 (749)
+. ..|+++ .. .++.+||||+|.+.|.|...............+...-.....++
T Consensus 221 ~~------------------~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 282 (485)
T 2qzs_A 221 EP------------------QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQI 282 (485)
T ss_dssp SH------------------HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHH
T ss_pred cc------------------ccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHH
Confidence 10 012110 02 68999999999998877532100000000000000000112345
Q ss_pred hcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 523 HIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 523 ~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
++|+..++++++|+++||+.+.||++.|++|+.++.+ ++++|+|+|+|+. .+.+.+++++++++ ++
T Consensus 283 ~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~----------~~~~~l~~~~~~~~--~~ 348 (485)
T 2qzs_A 283 AMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QGGQLALLGAGDP----------VLQEGFLAAAAEYP--GQ 348 (485)
T ss_dssp HHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TTCEEEEEEEECH----------HHHHHHHHHHHHST--TT
T ss_pred HcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CCcEEEEEeCCch----------HHHHHHHHHHHhCC--Cc
Confidence 6777322378999999999999999999999999976 3899999999863 24677888888875 68
Q ss_pred EE-EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------ceEEE
Q 036539 603 MR-WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDG---------VSGFH 672 (749)
Q Consensus 603 V~-flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg---------~~G~l 672 (749)
|. |.| . +.+++..+|+. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++ .+|++
T Consensus 349 v~~~~g----~-~~~~~~~~~~~-adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l 422 (485)
T 2qzs_A 349 VGVQIG----Y-HEAFSHRIMGG-ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFV 422 (485)
T ss_dssp EEEEES----C-CHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEE
T ss_pred EEEeCC----C-CHHHHHHHHHh-CCEEEECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEE
Confidence 86 777 4 56778999995 999999999999999999999999999999999999999998 89999
Q ss_pred ECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 673 IDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 673 v~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
++++|++++|++|.+++. +..|++.+++|++++++ ++|||+.++++++++|+.
T Consensus 423 ~~~~d~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~ly~~ 475 (485)
T 2qzs_A 423 FEDSNAWSLLRAIRRAFV-LWSRPSLWRFVQRQAMA---MDFSWQVAAKSYRELYYR 475 (485)
T ss_dssp ECSSSHHHHHHHHHHHHH-HHTSHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHh---hcCCHHHHHHHHHHHHHH
Confidence 999999999999976542 22799999999999974 789999999999999864
No 8
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=2.7e-40 Score=374.30 Aligned_cols=430 Identities=17% Similarity=0.170 Sum_probs=280.5
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCC-------
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQ------- 311 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~------- 311 (749)
|||++++.+.+|. +..||.+.++. +|+++|+++||+|+ |+|...+.... .+..
T Consensus 1 MkIl~v~~~~~P~-------~~~GG~~~~~~--------~la~~L~~~G~~V~----vi~~~~~~~~~-~~~~~~~~~~~ 60 (485)
T 1rzu_A 1 MNVLSVSSEIYPL-------IKTGGLADVVG--------ALPIALEAHGVRTR----TLIPGYPAVKA-AVTDPVKCFEF 60 (485)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCHHHHH-HCCSCEEEEEE
T ss_pred CeEEEEeeeeccc-------cccccHHHHHH--------HHHHHHHHcCCeEE----EEecccccccc-cccccceeEEE
Confidence 7999999877652 24699999999 77777899999999 88865322100 0000
Q ss_pred ------ccccc-cCccceEEEEecCccCCccccc--cccc--cccccc-hH---HHHHHHHHHHHHHc--CCCceEEEEc
Q 036539 312 ------ELEPI-EGTKHSNILRVPFKTDKGILHR--WVSR--FDVYPY-LE---GFAQDATTMILEFL--GGKPDLIIGN 374 (749)
Q Consensus 312 ------~~e~i-~~~~~~~I~rvp~~~~~~~~~~--~isr--~~i~py-l~---~f~~~~~~~l~~~l--~~~pDIIh~h 374 (749)
..... ....++.+++++..... .+. .... ..-|+. .. .|.. ....+.+.+ +.+|||||+|
T Consensus 61 ~~~~~~~~~~~~~~~~gv~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~DiIh~~ 137 (485)
T 1rzu_A 61 TDLLGEKADLLEVQHERLDLLILDAPAYY--ERSGGPYLGQTGKDYPDNWKRFAALSL-AAARIGAGVLPGWRPDMVHAH 137 (485)
T ss_dssp SCSSSCCEEEEEEEETTEEEEEEECHHHH--CSSSCSSBCTTSSBCTTHHHHHHHHHH-HHHHHHTTCSSSCCCSEEEEE
T ss_pred EEecCCeEEEEEEEecCceEEEEeChHHh--CCCccccCCcccccccchHHHHHHHHH-HHHHHHHHhccCCCCCEEEec
Confidence 00000 00135777777643100 000 0000 000110 01 1222 222333332 5689999999
Q ss_pred CCCchHHHHHHHHc--CCCcEEEEecCCccccc-CCCcc-----hhhhcC-cccccchhhhHHHHHhhhCCEEEeCCHHH
Q 036539 375 YSDGNLVASVMASK--LGITQATIAHALEKTKY-EDSDV-----KWKELD-PKYHFSCQFIADTIAMNATDFIIASTFQE 445 (749)
Q Consensus 375 ~~~~~lva~lla~~--~gvp~v~t~H~l~~~k~-~~s~~-----~~~~~~-~~y~f~~~~~~e~~a~~~aD~IIt~S~~~ 445 (749)
.+..++++.++++. .++|+|++.|+...... ..... .+..+. ....+......++..++.+|.||++|...
T Consensus 138 ~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~ 217 (485)
T 1rzu_A 138 DWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSY 217 (485)
T ss_dssp HHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHH
T ss_pred ccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhH
Confidence 87666677777765 89999999999743211 10000 000000 00011111234567889999999999887
Q ss_pred HhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcC
Q 036539 446 IAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIG 525 (749)
Q Consensus 446 ~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g 525 (749)
++...+. .| ++.++.+. +++ ..++.+||||+|.+.|.|...............+...-+....++.+|
T Consensus 218 ~~~~~~~--~~----g~~~~~~~----~~~--~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 285 (485)
T 1rzu_A 218 AEEILTA--EF----GMGLEGVI----GSR--AHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFR 285 (485)
T ss_dssp HHHTTSH--HH----HTTCHHHH----HTT--GGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHT
T ss_pred HHHHhcc--cc----CcchHHHH----Hhh--cCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcC
Confidence 7622110 00 00000000 012 568999999999998877542100000000000000000112345577
Q ss_pred ccCCCC-CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE
Q 036539 526 YLADRK-KPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR 604 (749)
Q Consensus 526 ~l~~~~-k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~ 604 (749)
+ +.+ +++|+|+||+.+.||++.|++|+.++.+ ++++|+|+|+|+. .+.+.+++++++++ ++|.
T Consensus 286 ~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~----------~~~~~l~~~~~~~~--~~v~ 349 (485)
T 1rzu_A 286 I--DDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGGRLVVLGAGDV----------ALEGALLAAASRHH--GRVG 349 (485)
T ss_dssp C--CCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTCEEEEEECBCH----------HHHHHHHHHHHHTT--TTEE
T ss_pred C--CCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cCceEEEEeCCch----------HHHHHHHHHHHhCC--CcEE
Confidence 6 443 6799999999999999999999999976 4899999999853 24577888888875 6887
Q ss_pred -EecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------ceEEEEC
Q 036539 605 -WIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDG---------VSGFHID 674 (749)
Q Consensus 605 -flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg---------~~G~lv~ 674 (749)
|.| . +.+++..+|+. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++ .+|++++
T Consensus 350 ~~~g----~-~~~~~~~~~~~-adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~ 423 (485)
T 1rzu_A 350 VAIG----Y-NEPLSHLMQAG-CDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFS 423 (485)
T ss_dssp EEES----C-CHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEES
T ss_pred EecC----C-CHHHHHHHHhc-CCEEEECcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeC
Confidence 677 3 56677899995 999999999999999999999999999999999999999998 8999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 675 PYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 675 p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
++|+++++++|.+++. +.+|++.+++|++++++ ++|||+.++++++++|+.
T Consensus 424 ~~d~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 424 PVTLDGLKQAIRRTVR-YYHDPKLWTQMQKLGMK---SDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp SCSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHT---CCCBHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHH---HhCChHHHHHHHHHHHHH
Confidence 9999999999976542 23799999999999974 789999999999999864
No 9
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=1.5e-39 Score=357.94 Aligned_cols=358 Identities=17% Similarity=0.232 Sum_probs=263.1
Q ss_pred CCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCccccc
Q 036539 259 PDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHR 338 (749)
Q Consensus 259 p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~ 338 (749)
|..||.+.++. +|++.|+++||+|+ |+|...+.... ....++.+..++.....
T Consensus 24 p~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~----------~~~~~i~~~~~~~~~~~----- 76 (394)
T 2jjm_A 24 PSVGGSGVVGT--------ELGKQLAERGHEIH----FITSGLPFRLN----------KVYPNIYFHEVTVNQYS----- 76 (394)
T ss_dssp C--CHHHHHHH--------HHHHHHHHTTCEEE----EECSSCC--------------CCCTTEEEECCCCC--------
T ss_pred CCCCCHHHHHH--------HHHHHHHhCCCEEE----EEeCCCCCccc----------ccCCceEEEeccccccc-----
Confidence 45799999999 67777899999999 98875322100 01124555555543211
Q ss_pred cccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchH-HHHHHHHcC--CCcEEEEecCCcccccCCCcchhhhc
Q 036539 339 WVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNL-VASVMASKL--GITQATIAHALEKTKYEDSDVKWKEL 415 (749)
Q Consensus 339 ~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~l-va~lla~~~--gvp~v~t~H~l~~~k~~~s~~~~~~~ 415 (749)
.+...++...+...+.+.+.+. +||+||+|++.... .+.++++.. ++|++.+.|+........
T Consensus 77 ---~~~~~~~~~~~~~~l~~~l~~~---~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~-------- 142 (394)
T 2jjm_A 77 ---VFQYPPYDLALASKMAEVAQRE---NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGS-------- 142 (394)
T ss_dssp ----CCSCCHHHHHHHHHHHHHHHH---TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHTTTT--------
T ss_pred ---ccccccccHHHHHHHHHHHHHc---CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccccCC--------
Confidence 0111122223333444444443 89999999876543 444444444 599999999853211100
Q ss_pred CcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCC
Q 036539 416 DPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFP 495 (749)
Q Consensus 416 ~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p 495 (749)
...+ ....+..++.+|.|+++|....+... . .+.. ..++.+||||+|.+.|.+
T Consensus 143 ~~~~-----~~~~~~~~~~ad~ii~~s~~~~~~~~-------------------~-~~~~--~~~~~vi~ngv~~~~~~~ 195 (394)
T 2jjm_A 143 DPSL-----NNLIRFGIEQSDVVTAVSHSLINETH-------------------E-LVKP--NKDIQTVYNFIDERVYFK 195 (394)
T ss_dssp CTTT-----HHHHHHHHHHSSEEEESCHHHHHHHH-------------------H-HTCC--SSCEEECCCCCCTTTCCC
T ss_pred CHHH-----HHHHHHHHhhCCEEEECCHHHHHHHH-------------------H-hhCC--cccEEEecCCccHHhcCC
Confidence 0001 12345578899999999988766211 0 1111 468999999999998876
Q ss_pred CchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCC
Q 036539 496 YTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDP 575 (749)
Q Consensus 496 ~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~ 575 (749)
...... ++.+|+ ++++++|+++||+.+.||++.+++|+..+.+. ++++|+|+|+|+.
T Consensus 196 ~~~~~~-------------------~~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~g~~- 252 (394)
T 2jjm_A 196 RDMTQL-------------------KKEYGI--SESEKILIHISNFRKVKRVQDVVQAFAKIVTE-VDAKLLLVGDGPE- 252 (394)
T ss_dssp CCCHHH-------------------HHHTTC--C---CEEEEECCCCGGGTHHHHHHHHHHHHHS-SCCEEEEECCCTT-
T ss_pred cchHHH-------------------HHHcCC--CCCCeEEEEeeccccccCHHHHHHHHHHHHhh-CCCEEEEECCchH-
Confidence 532221 133555 56788999999999999999999999999865 5699999999877
Q ss_pred CCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 576 SKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 576 ~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
.+++.++++++++.++|.|+|. .+++..+|+. +|++|+||.+|+||++++|||+||+|||+|
T Consensus 253 -----------~~~l~~~~~~~~l~~~v~~~g~------~~~~~~~~~~-adv~v~ps~~e~~~~~~~EAma~G~PvI~~ 314 (394)
T 2jjm_A 253 -----------FCTILQLVKNLHIEDRVLFLGK------QDNVAELLAM-SDLMLLLSEKESFGLVLLEAMACGVPCIGT 314 (394)
T ss_dssp -----------HHHHHHHHHTTTCGGGBCCCBS------CSCTHHHHHT-CSEEEECCSCCSCCHHHHHHHHTTCCEEEE
T ss_pred -----------HHHHHHHHHHcCCCCeEEEeCc------hhhHHHHHHh-CCEEEeccccCCCchHHHHHHhcCCCEEEe
Confidence 6788999999999999999994 2468889985 999999999999999999999999999999
Q ss_pred CccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 656 NQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 656 ~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++++.++|||+.++++++++|+.
T Consensus 315 ~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 384 (394)
T 2jjm_A 315 RVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLL----KDEELHRNMGERARESVYEQFRSEKIVSQYETIYYD 384 (394)
T ss_dssp CCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred cCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999996654 699999999999999999999999999999998864
No 10
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=100.00 E-value=1.2e-38 Score=353.20 Aligned_cols=372 Identities=17% Similarity=0.169 Sum_probs=259.8
Q ss_pred eeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCcccccc
Q 036539 238 LFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIE 317 (749)
Q Consensus 238 ~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~ 317 (749)
.|||++++.+. ..||.+.++. .|++.|+++||+|+ +++...+.. .......+.
T Consensus 40 ~mkIl~v~~~~-----------~~GG~~~~~~--------~l~~~L~~~G~~v~----v~~~~~~~~----~~~~~~~~~ 92 (416)
T 2x6q_A 40 GRSFVHVNSTS-----------FGGGVAEILH--------SLVPLLRSIGIEAR----WFVIEGPTE----FFNVTKTFH 92 (416)
T ss_dssp TCEEEEEESCS-----------SSSTHHHHHH--------HHHHHHHHTTCEEE----EEECCCCHH----HHHHHHHHH
T ss_pred ccEEEEEeCCC-----------CCCCHHHHHH--------HHHHHHHhCCCeEE----EEEccCCcc----hhhhhcccc
Confidence 48999998653 3599999999 66777899999998 777542110 000000000
Q ss_pred C-ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHc-CCCceEEEEcCCCchHHHHHHHHcCCCcEEE
Q 036539 318 G-TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFL-GGKPDLIIGNYSDGNLVASVMASKLGITQAT 395 (749)
Q Consensus 318 ~-~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l-~~~pDIIh~h~~~~~lva~lla~~~gvp~v~ 395 (749)
. ..+...++++ . .....+ ......+.+.+ ..+|||||+|.+....++.+++ .++|++.
T Consensus 93 ~~~~~~~~~~~~-------------~----~~~~~~-~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~--~~~p~v~ 152 (416)
T 2x6q_A 93 NALQGNESLKLT-------------E----EMKELY-LNVNRENSKFIDLSSFDYVLVHDPQPAALIEFYE--KKSPWLW 152 (416)
T ss_dssp HHHTTCCSCCCC-------------H----HHHHHH-HHHHHHHHHSSCGGGSSEEEEESSTTGGGGGGSC--CCSCEEE
T ss_pred eeeccccccccc-------------H----HHHHHH-HHHHHHHHHHHhhcCCCEEEEeccchhhHHHHHH--hcCCEEE
Confidence 0 0000000000 0 000111 11122233323 2389999999877654444333 2389999
Q ss_pred EecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCC
Q 036539 396 IAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGID 475 (749)
Q Consensus 396 t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~ 475 (749)
+.|+..... ....|+ . -...+..+|.+|+++..... .+++
T Consensus 153 ~~h~~~~~~---~~~~~~------------~-~~~~~~~~~~~i~~~s~~~~------------------------~~~~ 192 (416)
T 2x6q_A 153 RCHIDLSSP---NREFWE------------F-LRRFVEKYDRYIFHLPEYVQ------------------------PELD 192 (416)
T ss_dssp ECCSCCSSC---CHHHHH------------H-HHHHHTTSSEEEESSGGGSC------------------------TTSC
T ss_pred EEccccCCc---cHHHHH------------H-HHHHHHhCCEEEEechHHHH------------------------hhCC
Confidence 999753211 001111 1 12245677776644332211 0122
Q ss_pred CCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHH
Q 036539 476 VLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYG 555 (749)
Q Consensus 476 ~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~ 555 (749)
..++.+||||+|...+.+....... ....++.+|+ ++++++|+++||+.+.||++.|++|+.
T Consensus 193 --~~~~~vi~ngvd~~~~~~~~~~~~~--------------~~~~r~~~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~ 254 (416)
T 2x6q_A 193 --RNKAVIMPPSIDPLSEKNVELKQTE--------------ILRILERFDV--DPEKPIITQVSRFDPWKGIFDVIEIYR 254 (416)
T ss_dssp --TTTEEECCCCBCTTSTTTSCCCHHH--------------HHHHHHHTTC--CTTSCEEEEECCCCTTSCHHHHHHHHH
T ss_pred --ccceEEeCCCCChhhhcccccChhh--------------HHHHHHHhCC--CCCCcEEEEEeccccccCHHHHHHHHH
Confidence 3689999999998777543211100 0112345676 677899999999999999999999999
Q ss_pred HhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCC
Q 036539 556 KNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALY 635 (749)
Q Consensus 556 ~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~ 635 (749)
.+.+..|+++|+|+|+|+. .++ .+.+.++++++++++.++|.|+|+.+ ..+.+++..+|+. +|++|+||.+
T Consensus 255 ~l~~~~~~~~l~i~G~g~~----~~~---~~~~~l~~~~~~~~~~~~V~~~G~~~-~~~~~~~~~~~~~-ad~~v~ps~~ 325 (416)
T 2x6q_A 255 KVKEKIPGVQLLLVGVMAH----DDP---EGWIYFEKTLRKIGEDYDVKVLTNLI-GVHAREVNAFQRA-SDVILQMSIR 325 (416)
T ss_dssp HHHHHCTTCEEEEEECCCT----TCH---HHHHHHHHHHHHHTTCTTEEEEEGGG-TCCHHHHHHHHHH-CSEEEECCSS
T ss_pred HHHHhCCCeEEEEEecCcc----cch---hHHHHHHHHHHHhCCCCcEEEecccC-CCCHHHHHHHHHh-CCEEEECCCc
Confidence 9988888999999999975 011 23456788899999999999999655 4557899999995 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 036539 636 EAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYT 715 (749)
Q Consensus 636 E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ys 715 (749)
|+||++++|||+||+|||+|+.||..|++.++.+|++++ |+++++++|.+++ +|++.+++|+++|++++.++||
T Consensus 326 E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~~~~fs 399 (416)
T 2x6q_A 326 EGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLL----KHPEVSKEMGAKAKERVRKNFI 399 (416)
T ss_dssp CSSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHHTB
T ss_pred CCCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEEC--CHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999997 9999999996554 7999999999999999988999
Q ss_pred HHHHHHHHHHHHHH
Q 036539 716 WKIYANKMLNMGCM 729 (749)
Q Consensus 716 w~~~a~~ll~ly~~ 729 (749)
|+.++++++++|+.
T Consensus 400 ~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 400 ITKHMERYLDILNS 413 (416)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999864
No 11
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=100.00 E-value=5.6e-40 Score=356.98 Aligned_cols=367 Identities=16% Similarity=0.186 Sum_probs=262.3
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
|||++++.+..| .||.+.++. +|++.|+++||+|+ |+|.......
T Consensus 1 MkIl~i~~~~~~----------~gG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------------- 45 (374)
T 2iw1_A 1 MIVAFCLYKYFP----------FGGLQRDFM--------RIASTVAARGHHVR----VYTQSWEGDC------------- 45 (374)
T ss_dssp -CEEEECSEECT----------TCHHHHHHH--------HHHHHHHHTTCCEE----EEESEECSCC-------------
T ss_pred CeEEEEEeecCC----------CcchhhHHH--------HHHHHHHhCCCeEE----EEecCCCCCC-------------
Confidence 799999876543 499999999 67777899999999 8886532210
Q ss_pred ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEEec
Q 036539 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATIAH 398 (749)
Q Consensus 319 ~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H 398 (749)
..++.+.++|...... ......+...+.+.+.+ .+||+||+|.+..+..+.+.++..+++.+.+.|
T Consensus 46 ~~~~~v~~~~~~~~~~-----------~~~~~~~~~~l~~~i~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (374)
T 2iw1_A 46 PKAFELIQVPVKSHTN-----------HGRNAEYYAWVQNHLKE---HPADRVVGFNKMPGLDVYFAADVCYAEKVAQEK 111 (374)
T ss_dssp CTTCEEEECCCCCSSH-----------HHHHHHHHHHHHHHHHH---SCCSEEEESSCCTTCSEEECCSCCHHHHHHHHC
T ss_pred CCCcEEEEEccCcccc-----------hhhHHHHHHHHHHHHhc---cCCCEEEEecCCCCceeeeccccccceeeeecc
Confidence 0256778877653210 01112233333333332 389999999765432211111222222222233
Q ss_pred CCcccccCCCcchhhhcCcccccchhhhHHHHHhh--hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCC
Q 036539 399 ALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN--ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDV 476 (749)
Q Consensus 399 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~--~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~ 476 (749)
+... .....+.+. ...++..+. .+|.|+++|....+. +....|++
T Consensus 112 ~~~~-----------~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~-------------------~~~~~~~~- 158 (374)
T 2iw1_A 112 GFLY-----------RLTSRYRHY--AAFERATFEQGKSTKLMMLTDKQIAD-------------------FQKHYQTE- 158 (374)
T ss_dssp CHHH-----------HTSHHHHHH--HHHHHHHHSTTCCCEEEESCHHHHHH-------------------HHHHHCCC-
T ss_pred cchh-----------hhcHHHHHH--HHHHHHHhhccCCcEEEEcCHHHHHH-------------------HHHHhCCC-
Confidence 2210 001111111 112333343 699999999887661 11112444
Q ss_pred CCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHH
Q 036539 477 LDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGK 556 (749)
Q Consensus 477 ~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~ 556 (749)
..++.+||||+|.+.|.+......+ ...++.+|+ ++++++|+|+||+.+.||++.+++|+..
T Consensus 159 -~~~~~vi~ngv~~~~~~~~~~~~~~---------------~~~~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~ 220 (374)
T 2iw1_A 159 -PERFQILPPGIYPDRKYSEQIPNSR---------------EIYRQKNGI--KEQQNLLLQVGSDFGRKGVDRSIEALAS 220 (374)
T ss_dssp -GGGEEECCCCCCGGGSGGGSCTTHH---------------HHHHHHTTC--CTTCEEEEEECSCTTTTTHHHHHHHHHT
T ss_pred -hhheEEecCCcCHHhcCcccchhHH---------------HHHHHHhCC--CCCCeEEEEeccchhhcCHHHHHHHHHH
Confidence 6789999999999888664321111 012345676 6678899999999999999999999999
Q ss_pred hHcc-CCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCC
Q 036539 557 NKRL-RNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALY 635 (749)
Q Consensus 557 l~~~-~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~ 635 (749)
+.+. .++++|+|+|+|+. +.+.++++++++.++|.|+|+ .+++..+|+. +|++|+||.+
T Consensus 221 l~~~~~~~~~l~i~G~g~~-------------~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~v~ps~~ 280 (374)
T 2iw1_A 221 LPESLRHNTLLFVVGQDKP-------------RKFEALAEKLGVRSNVHFFSG------RNDVSELMAA-ADLLLHPAYQ 280 (374)
T ss_dssp SCHHHHHTEEEEEESSSCC-------------HHHHHHHHHHTCGGGEEEESC------CSCHHHHHHH-CSEEEECCSC
T ss_pred hHhccCCceEEEEEcCCCH-------------HHHHHHHHHcCCCCcEEECCC------cccHHHHHHh-cCEEEecccc
Confidence 8765 46899999999864 467888999999999999994 2478999995 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEEC-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhC
Q 036539 636 EAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHID-PYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECY 714 (749)
Q Consensus 636 E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~-p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~y 714 (749)
|+||++++|||+||+|||+|+.||..|++.++.+|++++ |+|+++++++|.+++ +|++.+++|+++|++++ ++|
T Consensus 281 e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~ 355 (374)
T 2iw1_A 281 EAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKAL----TQSPLRMAWAENARHYA-DTQ 355 (374)
T ss_dssp CSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHH-HHS
T ss_pred CCcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEeCCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHH-HHh
Confidence 999999999999999999999999999999999999998 899999999996654 69999999999999998 578
Q ss_pred CHHHHHHHHHHHHHHh
Q 036539 715 TWKIYANKMLNMGCMY 730 (749)
Q Consensus 715 sw~~~a~~ll~ly~~~ 730 (749)
+|...++++.++++.+
T Consensus 356 ~~~~~~~~~~~~l~~~ 371 (374)
T 2iw1_A 356 DLYSLPEKAADIITGG 371 (374)
T ss_dssp CCSCHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHHh
Confidence 9999999999988754
No 12
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=100.00 E-value=8.7e-39 Score=351.47 Aligned_cols=364 Identities=14% Similarity=0.186 Sum_probs=263.8
Q ss_pred CceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCcccc
Q 036539 236 PILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEP 315 (749)
Q Consensus 236 pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~ 315 (749)
.++|||++++++.. +..||.+.++. .+++.|+++||+|+ +++......... ....
T Consensus 18 ~~~MkIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~~~----~~~~ 72 (406)
T 2gek_A 18 GSHMRIGMVCPYSF---------DVPGGVQSHVL--------QLAEVLRDAGHEVS----VLAPASPHVKLP----DYVV 72 (406)
T ss_dssp ---CEEEEECSSCT---------TSCCHHHHHHH--------HHHHHHHHTTCEEE----EEESCCTTSCCC----TTEE
T ss_pred CCcceEEEEeccCC---------CCCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCccccCC----cccc
Confidence 45689999995443 24589999999 67777889999999 888764332100 0111
Q ss_pred ccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEE
Q 036539 316 IEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQAT 395 (749)
Q Consensus 316 i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~ 395 (749)
.. + .++++|+... ..+ +.+...+...+.+.+.+. +||+||+|.+.....+.++++..++|++.
T Consensus 73 ~~---~-~~~~~~~~~~-------~~~---~~~~~~~~~~l~~~l~~~---~~Dii~~~~~~~~~~~~~~~~~~~~~~i~ 135 (406)
T 2gek_A 73 SG---G-KAVPIPYNGS-------VAR---LRFGPATHRKVKKWIAEG---DFDVLHIHEPNAPSLSMLALQAAEGPIVA 135 (406)
T ss_dssp EC---C-CCC----------------------CCHHHHHHHHHHHHHH---CCSEEEEECCCSSSHHHHHHHHEESSEEE
T ss_pred cC---C-cEEeccccCC-------ccc---ccccHHHHHHHHHHHHhc---CCCEEEECCccchHHHHHHHHhcCCCEEE
Confidence 11 1 3344443211 011 111111223333334333 89999999877655566777778999999
Q ss_pred EecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCC
Q 036539 396 IAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGID 475 (749)
Q Consensus 396 t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~ 475 (749)
+.|+.... .. .+..+ ... .+ ..++.+|.++++|....+.. ..+++
T Consensus 136 ~~h~~~~~----~~-~~~~~-------~~~-~~-~~~~~~d~ii~~s~~~~~~~---------------------~~~~~ 180 (406)
T 2gek_A 136 TFHTSTTK----SL-TLSVF-------QGI-LR-PYHEKIIGRIAVSDLARRWQ---------------------MEALG 180 (406)
T ss_dssp EECCCCCS----HH-HHHHH-------HST-TH-HHHTTCSEEEESSHHHHHHH---------------------HHHHS
T ss_pred EEcCcchh----hh-hHHHH-------HHH-HH-HHHhhCCEEEECCHHHHHHH---------------------HHhcC
Confidence 99985221 10 01110 011 11 46789999999998776511 11223
Q ss_pred CCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecc-cCCCCHHHHHHHH
Q 036539 476 VLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARL-DVVKNLTGLTEWY 554 (749)
Q Consensus 476 ~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL-~~~Kgl~~LieA~ 554 (749)
..++ +||||+|.+.|.+.... .+. +.++++|+|+||+ .+.||++.+++|+
T Consensus 181 --~~~~-vi~~~v~~~~~~~~~~~------------------------~~~--~~~~~~i~~~G~~~~~~Kg~~~li~a~ 231 (406)
T 2gek_A 181 --SDAV-EIPNGVDVASFADAPLL------------------------DGY--PREGRTVLFLGRYDEPRKGMAVLLAAL 231 (406)
T ss_dssp --SCEE-ECCCCBCHHHHHTCCCC------------------------TTC--SCSSCEEEEESCTTSGGGCHHHHHHHH
T ss_pred --CCcE-EecCCCChhhcCCCchh------------------------hhc--cCCCeEEEEEeeeCccccCHHHHHHHH
Confidence 4578 99999998766544311 111 2356899999999 9999999999999
Q ss_pred HHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC
Q 036539 555 GKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL 634 (749)
Q Consensus 555 ~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~ 634 (749)
.++.+..++++|+|+|+++. +.+.++++++ .++|.|+| .++..++..+|+. +|++|+||.
T Consensus 232 ~~l~~~~~~~~l~i~G~~~~-------------~~l~~~~~~~--~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~ 291 (406)
T 2gek_A 232 PKLVARFPDVEILIVGRGDE-------------DELREQAGDL--AGHLRFLG----QVDDATKASAMRS-ADVYCAPHL 291 (406)
T ss_dssp HHHHTTSTTCEEEEESCSCH-------------HHHHHHTGGG--GGGEEECC----SCCHHHHHHHHHH-SSEEEECCC
T ss_pred HHHHHHCCCeEEEEEcCCcH-------------HHHHHHHHhc--cCcEEEEe----cCCHHHHHHHHHH-CCEEEecCC
Confidence 99998888999999999742 4566677666 68899999 7778999999995 999999996
Q ss_pred -CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 036539 635 -YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINEC 713 (749)
Q Consensus 635 -~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ 713 (749)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+.++++++++++. +
T Consensus 292 ~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~-~ 366 (406)
T 2gek_A 292 GGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGIL----EDDQLRAGYVARASERVH-R 366 (406)
T ss_dssp SCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHGG-G
T ss_pred CCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHH-h
Confidence 9999999999999999999999999999999999999999999999999996554 799999999999999997 9
Q ss_pred CCHHHHHHHHHHHHHHh
Q 036539 714 YTWKIYANKMLNMGCMY 730 (749)
Q Consensus 714 ysw~~~a~~ll~ly~~~ 730 (749)
|||+.++++++++|+..
T Consensus 367 ~s~~~~~~~~~~~~~~~ 383 (406)
T 2gek_A 367 YDWSVVSAQIMRVYETV 383 (406)
T ss_dssp GBHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 99999999999988753
No 13
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=100.00 E-value=9e-38 Score=345.63 Aligned_cols=360 Identities=13% Similarity=0.091 Sum_probs=260.8
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEG 318 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~ 318 (749)
|||++++++. |..||.+.++. +|+++|+++ |+|+ |+|.... |......
T Consensus 1 MkI~~v~~~~----------p~~gG~~~~~~--------~l~~~L~~~-~~V~----v~~~~~~---g~~~~~~------ 48 (413)
T 3oy2_A 1 MKLIIVGAHS----------SVPSGYGRVMR--------AIVPRISKA-HEVI----VFGIHAF---GRSVHAN------ 48 (413)
T ss_dssp CEEEEEEECT----------TCCSHHHHHHH--------HHHHHHTTT-SEEE----EEEESCC---SCCSCSS------
T ss_pred CeEEEecCCC----------CCCCCHHHHHH--------HHHHHHHhc-CCeE----EEeecCC---Ccccccc------
Confidence 8999998654 33599999999 777778899 9999 8775432 1100000
Q ss_pred ccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCc----EE
Q 036539 319 TKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGIT----QA 394 (749)
Q Consensus 319 ~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp----~v 394 (749)
.......... .. .+++.. .+ +...+.+.+.+. +||+||+|++.+ ..+.++++..++| .+
T Consensus 49 ---~~~~~~~~~~---~~-~~~~~~-~~-----~~~~l~~~l~~~---~~Div~~~~~~~-~~~~~~~~~~~~~~~~~~~ 111 (413)
T 3oy2_A 49 ---IEEFDAQTAE---HV-RGLNEQ-GF-----YYSGLSEFIDVH---KPDIVMIYNDPI-VIGNYLLAMGKCSHRTKIV 111 (413)
T ss_dssp ---SEEEEHHHHH---HH-TTCCST-TC-----CHHHHHHHHHHH---CCSEEEEEECHH-HHHHHHHHGGGCCSCCEEE
T ss_pred ---cccCCccccc---cc-cccccc-cc-----hHHHHHHHHHhc---CCCEEEEcchHH-HHHHHHHHhccCCCCCcee
Confidence 0100110000 00 001100 01 011223334433 899999995443 5566666666655 34
Q ss_pred EEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCC--EEEeCCHHHHhhcCCCCCccccccccccccchhhhc
Q 036539 395 TIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATD--FIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVK 472 (749)
Q Consensus 395 ~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD--~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~ 472 (749)
...|..... +... .+..++.+| .+|++|....+... ..
T Consensus 112 ~~~~~~~~~--------~~~~------------~~~~~~~~~~~~ii~~S~~~~~~~~--------------------~~ 151 (413)
T 3oy2_A 112 LYVDLVSKN--------IREN------------LWWIFSHPKVVGVMAMSKCWISDIC--------------------NY 151 (413)
T ss_dssp EEECCCSBS--------CCGG------------GGGGGGCTTEEEEEESSTHHHHHHH--------------------HT
T ss_pred eeccccchh--------hHHH------------HHHHHhccCCceEEEcCHHHHHHHH--------------------Hc
Confidence 445533110 0000 123577888 99999987766211 12
Q ss_pred cCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHH
Q 036539 473 GIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTE 552 (749)
Q Consensus 473 Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~Lie 552 (749)
|+ ..++.+||||+|.+.|. .. ++.+|+....++++|+++||+.+.||++.+++
T Consensus 152 ~~---~~~~~vi~ngvd~~~~~---~~---------------------~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~ 204 (413)
T 3oy2_A 152 GC---KVPINIVSHFVDTKTIY---DA---------------------RKLVGLSEYNDDVLFLNMNRNTARKRLDIYVL 204 (413)
T ss_dssp TC---CSCEEECCCCCCCCCCT---TH---------------------HHHTTCGGGTTSEEEECCSCSSGGGTHHHHHH
T ss_pred CC---CCceEEeCCCCCHHHHH---HH---------------------HHhcCCCcccCceEEEEcCCCchhcCcHHHHH
Confidence 33 56899999999998771 11 12355522237889999999999999999999
Q ss_pred HHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc-------EEEecCccCcCChHHHHHHHHcc
Q 036539 553 WYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ-------MRWIAAQSDRLRNGELYRCIADT 625 (749)
Q Consensus 553 A~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~-------V~flG~~~~~~~~~el~~~la~a 625 (749)
|+.++.+..++++|+|+|+|+.... ....+.+.++++++++.++ |.|.| .++.+++..+|+.
T Consensus 205 a~~~l~~~~~~~~l~ivG~g~~~~~------~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g----~~~~~~~~~~~~~- 273 (413)
T 3oy2_A 205 AAARFISKYPDAKVRFLCNSHHESK------FDLHSIALRELVASGVDNVFTHLNKIMINRT----VLTDERVDMMYNA- 273 (413)
T ss_dssp HHHHHHHHCTTCCEEEEEECCTTCS------CCHHHHHHHHHHHHTCSCHHHHHTTEEEECS----CCCHHHHHHHHHH-
T ss_pred HHHHHHHhCCCcEEEEEeCCcccch------hhHHHHHHHHHHHcCcccccccccceeeccC----cCCHHHHHHHHHh-
Confidence 9999988889999999999976110 0123678888999999987 88888 7889999999995
Q ss_pred CcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCce---------------EE--EECCCCHHHHHHHHHHH
Q 036539 626 KGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVS---------------GF--HIDPYNGDESSDKIADF 688 (749)
Q Consensus 626 advfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~---------------G~--lv~p~d~e~lA~aI~~~ 688 (749)
+|++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+ |+ +++++|+++++++| ++
T Consensus 274 adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l 352 (413)
T 3oy2_A 274 CDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TF 352 (413)
T ss_dssp CSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HH
T ss_pred CCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HH
Confidence 99999999999999999999999999999999999999999887 99 99999999999999 86
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 689 FEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 689 l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
+ +|++.+++|++++++++.++|||+.++++++++|+..
T Consensus 353 ~----~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~ 390 (413)
T 3oy2_A 353 F----KDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSL 390 (413)
T ss_dssp T----TSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHH
T ss_pred h----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 5 7999999999999999988999999999999998753
No 14
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=100.00 E-value=7.3e-37 Score=330.13 Aligned_cols=310 Identities=15% Similarity=0.105 Sum_probs=242.0
Q ss_pred eEEEEEccc--------ccCCCcccCCCC-CcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCcc
Q 036539 239 FNVVIFSPH--------GYFGQADVLGLP-DTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKC 309 (749)
Q Consensus 239 ~rIvivs~h--------~~~~~~~~~g~p-~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~ 309 (749)
|||++++.+ .+|-+ | ..||.+.++. +|++.|+++||+|+ +++.......
T Consensus 4 mkIl~v~~~~~~~~~~~~~p~~------p~~~gG~~~~~~--------~l~~~L~~~G~~v~----v~~~~~~~~~---- 61 (342)
T 2iuy_A 4 LKVALVNIPLRVPGSDAWISVP------PQGYGGIQWVVA--------NLMDGLLELGHEVF----LLGAPGSPAG---- 61 (342)
T ss_dssp CEEEEECCCCBCTTSSSBCCSS------CSSSCHHHHHHH--------HHHHHHHHTTCEEE----EESCTTSCCC----
T ss_pred cEEEEEeccccccCcccccccC------cccCChHHHHHH--------HHHHHHHHcCCeEE----EEecCCCCCC----
Confidence 899999987 32211 2 3599999999 66777889999999 8887632210
Q ss_pred CCccccccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcC
Q 036539 310 NQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKL 389 (749)
Q Consensus 310 ~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~ 389 (749)
..++.+++.+ . + . .+.+.+.+ .+||+||+|.+.....+ ++..
T Consensus 62 ---------~~~~~~~~~~--~--------------~---~----~l~~~l~~---~~~Dvi~~~~~~~~~~~---~~~~ 103 (342)
T 2iuy_A 62 ---------RPGLTVVPAG--E--------------P---E----EIERWLRT---ADVDVVHDHSGGVIGPA---GLPP 103 (342)
T ss_dssp ---------STTEEECSCC--S--------------H---H----HHHHHHHH---CCCSEEEECSSSSSCST---TCCT
T ss_pred ---------CCcceeccCC--c--------------H---H----HHHHHHHh---cCCCEEEECCchhhHHH---Hhhc
Confidence 0123332111 0 0 0 22223332 38999999987754332 5678
Q ss_pred CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchh
Q 036539 390 GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCR 469 (749)
Q Consensus 390 gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~ 469 (749)
++| +.+.|+..... ..+|.+|++|....+...
T Consensus 104 ~~p-v~~~h~~~~~~----------------------------~~~d~ii~~S~~~~~~~~------------------- 135 (342)
T 2iuy_A 104 GTA-FISSHHFTTRP----------------------------VNPVGCTYSSRAQRAHCG------------------- 135 (342)
T ss_dssp TCE-EEEEECSSSBC----------------------------SCCTTEEESCHHHHHHTT-------------------
T ss_pred CCC-EEEecCCCCCc----------------------------ccceEEEEcCHHHHHHHh-------------------
Confidence 999 99999873211 018999999988766111
Q ss_pred hhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHH
Q 036539 470 VVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTG 549 (749)
Q Consensus 470 v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~ 549 (749)
. ..++.+||||+|.+.|.+.... .+++++|+|+||+.+.||++.
T Consensus 136 -----~--~~~~~vi~ngvd~~~~~~~~~~-----------------------------~~~~~~i~~vG~~~~~Kg~~~ 179 (342)
T 2iuy_A 136 -----G--GDDAPVIPIPVDPARYRSAADQ-----------------------------VAKEDFLLFMGRVSPHKGALE 179 (342)
T ss_dssp -----C--CTTSCBCCCCBCGGGSCCSTTC-----------------------------CCCCSCEEEESCCCGGGTHHH
T ss_pred -----c--CCceEEEcCCCChhhcCccccc-----------------------------CCCCCEEEEEeccccccCHHH
Confidence 1 4578899999999887654320 235568999999999999999
Q ss_pred HHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEE
Q 036539 550 LTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAF 629 (749)
Q Consensus 550 LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvf 629 (749)
+++|+.++ +++|+|+|+|+. .+.+++++++++ ++|+|+| .++..++..+|+. +|++
T Consensus 180 li~a~~~~-----~~~l~i~G~g~~------------~~~l~~~~~~~~--~~v~~~g----~~~~~~l~~~~~~-adv~ 235 (342)
T 2iuy_A 180 AAAFAHAC-----GRRLVLAGPAWE------------PEYFDEITRRYG--STVEPIG----EVGGERRLDLLAS-AHAV 235 (342)
T ss_dssp HHHHHHHH-----TCCEEEESCCCC------------HHHHHHHHHHHT--TTEEECC----CCCHHHHHHHHHH-CSEE
T ss_pred HHHHHHhc-----CcEEEEEeCccc------------HHHHHHHHHHhC--CCEEEec----cCCHHHHHHHHHh-CCEE
Confidence 99999987 689999999977 567778888877 7999999 7788999999995 9999
Q ss_pred EECCC----------CCCCcHHHHHHHHcCCcEEEcCcccccccccc--CceEEEECCCCHHHHHHHHHHHHHHhcCCHH
Q 036539 630 VQPAL----------YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD--GVSGFHIDPYNGDESSDKIADFFEACKVDPT 697 (749)
Q Consensus 630 V~PS~----------~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d--g~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~ 697 (749)
|+||. .|+||++++|||+||+|||+|+.||..|++.+ +.+|+++++ |+++++++|.+ +.+
T Consensus 236 v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~----l~~--- 307 (342)
T 2iuy_A 236 LAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDF-APDEARRTLAG----LPA--- 307 (342)
T ss_dssp EECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSSCC-CHHHHHHHHHT----SCC---
T ss_pred EECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEcCC-CHHHHHHHHHH----HHH---
Confidence 99999 89999999999999999999999999999999 999999999 99999999954 444
Q ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 698 YWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 698 ~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
++++++++.++|||+.++++++++|+.
T Consensus 308 -----~~~~~~~~~~~~s~~~~~~~~~~~~~~ 334 (342)
T 2iuy_A 308 -----SDEVRRAAVRLWGHVTIAERYVEQYRR 334 (342)
T ss_dssp -----HHHHHHHHHHHHBHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 778899998999999999999999874
No 15
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=100.00 E-value=1.7e-33 Score=314.36 Aligned_cols=346 Identities=11% Similarity=0.037 Sum_probs=225.6
Q ss_pred CceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCcccc
Q 036539 236 PILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEP 315 (749)
Q Consensus 236 pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~ 315 (749)
+..|||++++++..|+. ..||.. .+. +|+++|+++||+|+ |+|+..... . .....
T Consensus 44 ~~~mrI~~v~~~~~p~~-------~~GG~~-~v~--------~la~~L~~~GheV~----Vvt~~~~~~-~----~~~~~ 98 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEH-------MFGGIS-TAL--------KLFEQFDNKKFKKR----IILTDATPN-P----KDLQS 98 (413)
T ss_dssp CCSCEEEEEESCCCGGG-------CSHHHH-HHH--------HHHTTSCTTTCEEE----EEESSCCCC-H----HHHGG
T ss_pred CCCceEEEEeCCCCccc-------cccHHH-HHH--------HHHHHHHHcCCceE----EEEecCCCC-h----HHHHh
Confidence 34699999999887631 247764 466 77888899999999 999863210 0 00111
Q ss_pred ccCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHH-------c
Q 036539 316 IEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMAS-------K 388 (749)
Q Consensus 316 i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~-------~ 388 (749)
+. .... .++.....+.. .+..+...+ ..... ..+||+||++++.++..+..+.+ .
T Consensus 99 ~~---~~~~--~~~~~~~~~~~------~i~~~~~~~-----~~~~~--~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~ 160 (413)
T 2x0d_A 99 FK---SFKY--VMPEEDKDFAL------QIVPFNDRY-----NRTIP--VAKHDIFIATAWWTAYAAQRIVSWQSDTYGI 160 (413)
T ss_dssp GT---TSEE--CCTTCCCCCSE------EEEECSCCT-----TCCEE--ECTTEEEEECSHHHHHHHHHHHHHHHHHHTC
T ss_pred hh---ccce--eeccCCccccc------eeeeccccc-----ccccc--CCCCCEEEEehHHHHHHHHHhhhhhhhhccc
Confidence 11 1111 11111100000 001110000 00000 13799999998766555444321 1
Q ss_pred CCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCC--EEEeCCHHHHhhcCCCCCcccccccccccc
Q 036539 389 LGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATD--FIIASTFQEIAGSKDRPGQYESHTAFTLPG 466 (749)
Q Consensus 389 ~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD--~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ 466 (749)
...+.+..+|+.+...++... ........+..++ .+|++|....+..
T Consensus 161 ~~~~~~~~v~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~vi~~S~~~~~~l----------------- 209 (413)
T 2x0d_A 161 PPNKILYIIQDFEPGFYQWSS--------------QYVLAESTYKYRGPQIAVFNSELLKQYF----------------- 209 (413)
T ss_dssp CCCCEEEEECSCGGGGSCSSH--------------HHHHHHHTTSCCSCEEEEEESHHHHHHH-----------------
T ss_pred ccCcEEEEEeechhhcCccCh--------------HHHHHHHHhccCCceEEEEcCHHHHHHH-----------------
Confidence 245777778876432211110 0111233455554 5888898776621
Q ss_pred chhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEecc-cCCC
Q 036539 467 LCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARL-DVVK 545 (749)
Q Consensus 467 ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL-~~~K 545 (749)
...|++ .+++.++|||+|.+.|.+.. .+ .++++.|+++||+ .+.|
T Consensus 210 ---~~~g~~--~~~~~~i~~g~d~~~~~~~~--------------------------~~---~~~~~~il~~gr~~~~~K 255 (413)
T 2x0d_A 210 ---NNKGYN--FTDEYFFQPKINTTLKNYIN--------------------------DK---RQKEKIILVYGRPSVKRN 255 (413)
T ss_dssp ---HHHTCC--CSEEEEECCCCCHHHHTTTT--------------------------SC---CCCCSEEEEEECTTCGGG
T ss_pred ---HHcCCC--CCceEEeCCCcCchhhcccc--------------------------cc---cCCCCEEEEEecCchhcc
Confidence 112443 35788999999976553310 01 2456688999997 6899
Q ss_pred CHHHHHHHHHHhHccCCC---eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHH
Q 036539 546 NLTGLTEWYGKNKRLRNL---VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCI 622 (749)
Q Consensus 546 gl~~LieA~~~l~~~~~~---v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~l 622 (749)
|++.|++|++++.+..|+ ++|+|+|+++. . .++++..+|+|+| .++.+++..+|
T Consensus 256 g~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~------------~-------~~l~~~~~v~f~G----~~~~~~l~~~~ 312 (413)
T 2x0d_A 256 AFTLIVEALKIFVQKYDRSNEWKIISVGEKHK------------D-------IALGKGIHLNSLG----KLTLEDYADLL 312 (413)
T ss_dssp CHHHHHHHHHHHHHHCTTGGGCEEEEEESCCC------------C-------EEEETTEEEEEEE----SCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCceEEEEEcCCch------------h-------hhcCCcCcEEEcC----CCCHHHHHHHH
Confidence 999999999999877664 89999999866 1 2456778999999 77889999999
Q ss_pred HccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Q 036539 623 ADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKF 702 (749)
Q Consensus 623 a~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~m 702 (749)
+. ||+||+||.+|+||++++||||||+|||++ .||..|++.++.+|++++|+|++++|++|.+++ +|++.+++
T Consensus 313 ~~-adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll----~~~~~~~~- 385 (413)
T 2x0d_A 313 KR-SSIGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELC----MSFNNRDV- 385 (413)
T ss_dssp HH-CCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHH----HHTC-----
T ss_pred Hh-CCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHH----cCHHHHHH-
Confidence 95 999999999999999999999999999995 467789999999999999999999999996654 67777766
Q ss_pred HHHHHHHHHHhCCHHHHHHH
Q 036539 703 STEGLKRINECYTWKIYANK 722 (749)
Q Consensus 703 s~~a~~~v~~~ysw~~~a~~ 722 (749)
+|++++ ++|||+..+++
T Consensus 386 --~~~~~~-~~~~W~~~~~~ 402 (413)
T 2x0d_A 386 --DKKESS-NMMFYINEFNE 402 (413)
T ss_dssp -----CCB-SCGGGCCCC--
T ss_pred --hHHHHH-HhCCHHHHHHH
Confidence 566666 68999999877
No 16
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.97 E-value=6.8e-31 Score=285.24 Aligned_cols=340 Identities=11% Similarity=0.015 Sum_probs=235.8
Q ss_pred ceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccc
Q 036539 237 ILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPI 316 (749)
Q Consensus 237 m~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i 316 (749)
|.|||++++ . .+||.+..+. .|+++|+++||+|+ ++|...... . ..+
T Consensus 5 m~mkIl~~~-~------------~~gG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~-----~---~~~ 51 (364)
T 1f0k_A 5 QGKRLMVMA-G------------GTGGHVFPGL--------AVAHHLMAQGWQVR----WLGTADRME-----A---DLV 51 (364)
T ss_dssp --CEEEEEC-C------------SSHHHHHHHH--------HHHHHHHTTTCEEE----EEECTTSTH-----H---HHG
T ss_pred CCcEEEEEe-C------------CCccchhHHH--------HHHHHHHHcCCEEE----EEecCCcch-----h---hhc
Confidence 348999997 1 1378777777 67777899999999 888652110 0 111
Q ss_pred cCccceEEEEecCccCCccccccccccccccchHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEEEE
Q 036539 317 EGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDATTMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQATI 396 (749)
Q Consensus 317 ~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t 396 (749)
. ..++.+..++.....+. ..................+.+.+.+. +||+||+|....+..+.++++..|+|++.+
T Consensus 52 ~-~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~---~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~ 125 (364)
T 1f0k_A 52 P-KHGIEIDFIRISGLRGK--GIKALIAAPLRIFNAWRQARAIMKAY---KPDVVLGMGGYVSGPGGLAAWSLGIPVVLH 125 (364)
T ss_dssp G-GGTCEEEECCCCCCTTC--CHHHHHTCHHHHHHHHHHHHHHHHHH---CCSEEEECSSTTHHHHHHHHHHTTCCEEEE
T ss_pred c-ccCCceEEecCCccCcC--ccHHHHHHHHHHHHHHHHHHHHHHhc---CCCEEEEeCCcCchHHHHHHHHcCCCEEEE
Confidence 1 12466666665421100 00000000000111222333333333 899999998776666777888899999999
Q ss_pred ecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCC
Q 036539 397 AHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDV 476 (749)
Q Consensus 397 ~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~ 476 (749)
.|+.... ...+...+.+|.+++++...
T Consensus 126 ~~~~~~~----------------------~~~~~~~~~~d~v~~~~~~~------------------------------- 152 (364)
T 1f0k_A 126 EQNGIAG----------------------LTNKWLAKIATKVMQAFPGA------------------------------- 152 (364)
T ss_dssp ECSSSCC----------------------HHHHHHTTTCSEEEESSTTS-------------------------------
T ss_pred ecCCCCc----------------------HHHHHHHHhCCEEEecChhh-------------------------------
Confidence 9864210 01234566899999877310
Q ss_pred CCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCccCCCCCcE-EEEEecccCCCCHHHHHHHHH
Q 036539 477 LDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPI-IFSMARLDVVKNLTGLTEWYG 555 (749)
Q Consensus 477 ~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~v-Il~vGRL~~~Kgl~~LieA~~ 555 (749)
++ ++.+|+||+|.+.|.+.... +.++. ++++++ +++.||+.+.||.+.+++|+.
T Consensus 153 ~~-~~~~i~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~il~~~g~~~~~k~~~~li~a~~ 207 (364)
T 1f0k_A 153 FP-NAEVVGNPVRTDVLALPLPQ----------------------QRLAG--REGPVRVLVVGGSQGARILNQTMPQVAA 207 (364)
T ss_dssp SS-SCEECCCCCCHHHHTSCCHH----------------------HHHTT--CCSSEEEEEECTTTCCHHHHHHHHHHHH
T ss_pred cC-CceEeCCccchhhcccchhh----------------------hhccc--CCCCcEEEEEcCchHhHHHHHHHHHHHH
Confidence 12 56799999998766442211 22444 445554 455579999999999999999
Q ss_pred HhHccCCCeE-EEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCC
Q 036539 556 KNKRLRNLVN-LVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL 634 (749)
Q Consensus 556 ~l~~~~~~v~-LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~ 634 (749)
++.+ +++ ++++|+++. +++.++++++++ ++|+|+|++ +++..+|+. +|++|+||.
T Consensus 208 ~l~~---~~~~l~i~G~~~~-------------~~l~~~~~~~~~-~~v~~~g~~------~~~~~~~~~-ad~~v~~sg 263 (364)
T 1f0k_A 208 KLGD---SVTIWHQSGKGSQ-------------QSVEQAYAEAGQ-PQHKVTEFI------DDMAAAYAW-ADVVVCRSG 263 (364)
T ss_dssp HHGG---GEEEEEECCTTCH-------------HHHHHHHHHTTC-TTSEEESCC------SCHHHHHHH-CSEEEECCC
T ss_pred HhcC---CcEEEEEcCCchH-------------HHHHHHHhhcCC-CceEEecch------hhHHHHHHh-CCEEEECCc
Confidence 9865 678 566776642 567778888887 479999954 368889994 999999983
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccc--------cccccCceEEEECCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 036539 635 YEAFGLTVIEAMNCGLPTFATNQGGPA--------EIIVDGVSGFHIDPYN--GDESSDKIADFFEACKVDPTYWNKFST 704 (749)
Q Consensus 635 ~E~fGLtvlEAMa~GlPVVat~~GG~~--------EiI~dg~~G~lv~p~d--~e~lA~aI~~~l~~l~~dp~~~~~ms~ 704 (749)
|++++|||+||+|||+++.||.. +++.+| .|++++++| +++++++| .++ |++.+++|++
T Consensus 264 ----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-~g~~~~~~d~~~~~la~~i----~~l--~~~~~~~~~~ 332 (364)
T 1f0k_A 264 ----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-AAKIIEQPQLSVDAVANTL----AGW--SRETLLTMAE 332 (364)
T ss_dssp ----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-SEEECCGGGCCHHHHHHHH----HTC--CHHHHHHHHH
T ss_pred ----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-cEEEeccccCCHHHHHHHH----Hhc--CHHHHHHHHH
Confidence 99999999999999999999864 466555 599999988 99999999 455 9999999999
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 705 EGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 705 ~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
++++.+ ++|+|+.++++++++|+.
T Consensus 333 ~~~~~~-~~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 333 RARAAS-IPDATERVANEVSRVARA 356 (364)
T ss_dssp HHHHTC-CTTHHHHHHHHHHHHHTT
T ss_pred HHHHhh-ccCHHHHHHHHHHHHHHH
Confidence 999987 689999999999998864
No 17
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.97 E-value=1.1e-30 Score=299.79 Aligned_cols=337 Identities=13% Similarity=0.108 Sum_probs=226.8
Q ss_pred CCceEEEEcCCCchHHHHHHHH-cCCCcEEEEecCCccccc----CCCcchhhh--cC-----cccccchhhhHHHHHhh
Q 036539 366 GKPDLIIGNYSDGNLVASVMAS-KLGITQATIAHALEKTKY----EDSDVKWKE--LD-----PKYHFSCQFIADTIAMN 433 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~-~~gvp~v~t~H~l~~~k~----~~s~~~~~~--~~-----~~y~f~~~~~~e~~a~~ 433 (749)
.+|||+|+|+|..+.++.++++ ..++++|+|+|+.....+ ...+.++.. +. ....+...+..++.+..
T Consensus 180 ~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~ 259 (725)
T 3nb0_A 180 QHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAH 259 (725)
T ss_dssp SEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHH
Confidence 6799999999999888888875 458999999999853333 111222210 00 00112234456777889
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHh
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEEL 513 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~ 513 (749)
.||.|+|+|...+...... .+.+ ..++ ||||+|.+.|.|..........-...+.+.
T Consensus 260 ~AD~ITTVS~~yA~Ei~~L-------------------l~r~--~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~ 316 (725)
T 3nb0_A 260 SADVFTTVSQITAFEAEHL-------------------LKRK--PDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDF 316 (725)
T ss_dssp HSSEEEESSHHHHHHHHHH-------------------TSSC--CSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHH
T ss_pred hCCEEEECCHHHHHHHHHH-------------------hcCC--CCEE--EcCCccccccCcchhhHHHHHHHHHHHHHH
Confidence 9999999999887743321 1111 2233 999999999998633221111111122222
Q ss_pred hccccchhhhcCccCC-CCCcEEEEEeccc-CCCCHHHHHHHHHHhHcc-------CCCeEEEEEeccCCCC--------
Q 036539 514 LYNKEDNNEHIGYLAD-RKKPIIFSMARLD-VVKNLTGLTEWYGKNKRL-------RNLVNLVIVGAFFDPS-------- 576 (749)
Q Consensus 514 l~~~~~~~~~~g~l~~-~~k~vIl~vGRL~-~~Kgl~~LieA~~~l~~~-------~~~v~LvIVG~g~~~~-------- 576 (749)
+-+ .....+++ + .++++|+.+||++ +.||++.+++|+.++... ..-+.|+|+..+....
T Consensus 317 l~~--~~~~~l~l--~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~ 392 (725)
T 3nb0_A 317 VRG--HFHGCFDF--DLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQ 392 (725)
T ss_dssp HHH--HTTTCCCS--CGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHH
T ss_pred HHh--hcccCCCC--CCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcch
Confidence 110 00111233 3 3456677789999 799999999999998743 2337788888774310
Q ss_pred -----------------------------------CCc-chhHHH---------------------------------HH
Q 036539 577 -----------------------------------KSK-DREETA---------------------------------EI 587 (749)
Q Consensus 577 -----------------------------------~~~-d~ee~~---------------------------------~~ 587 (749)
+.+ |.++.- ..
T Consensus 393 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~ 472 (725)
T 3nb0_A 393 AEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDAN 472 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGG
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCc
Confidence 000 111100 11
Q ss_pred HHHHHHHHHcCCCCc------EEEecC-ccC--cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc
Q 036539 588 KKMHALMEKYQLKGQ------MRWIAA-QSD--RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG 658 (749)
Q Consensus 588 ~~l~~li~~~~L~~~------V~flG~-~~~--~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G 658 (749)
+.+...++++++.++ |.|++- .++ .+-..++..+|+ +||+||+||.+|+||++++||||||+|||+|+.|
T Consensus 473 D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~-~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 473 DLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVR-GCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHH-HCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred cHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHh-hceEEEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 233445566777665 677752 211 111236888888 4999999999999999999999999999999999
Q ss_pred ccccccccC-------ceEEEEC---CCCHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 659 GPAEIIVDG-------VSGFHID---PYNGDESSDKIADFFEACK-VDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 659 G~~EiI~dg-------~~G~lv~---p~d~e~lA~aI~~~l~~l~-~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
|+.|+|.++ .+|+++. +.|+++++++|.+++..+. .++..+.+|+++|++.+ ++|+|+.++++|+++|
T Consensus 552 G~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A-~~FSWe~iA~~Yl~~Y 630 (725)
T 3nb0_A 552 GFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALS-DLLDWKRMGLEYVKAR 630 (725)
T ss_dssp HHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGG-GGGBHHHHHHHHHHHH
T ss_pred ChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHH
Confidence 999999876 3699883 5678888888888876655 47888999999998776 7999999999999999
Q ss_pred HHhH
Q 036539 728 CMYS 731 (749)
Q Consensus 728 ~~~~ 731 (749)
+...
T Consensus 631 e~aL 634 (725)
T 3nb0_A 631 QLAL 634 (725)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8653
No 18
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.97 E-value=8.5e-32 Score=299.72 Aligned_cols=245 Identities=12% Similarity=0.090 Sum_probs=181.1
Q ss_pred CceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHH
Q 036539 367 KPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEI 446 (749)
Q Consensus 367 ~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~ 446 (749)
++|+||.+....+.+ ..+++..++|++.+.|+..... ... ... .....++..++.+|.||++|....
T Consensus 124 ~~DvIh~~~~~~~~~-~~~~~~~~~p~v~~~h~~~~~~---------~~~-~~~--~~~~~~~~~~~~ad~vi~~S~~~~ 190 (406)
T 2hy7_A 124 ESDVIVFESGIAVAF-IELAKRVNPAAKLVYRASDGLS---------TIN-VAS--YIEREFDRVAPTLDVIALVSPAMA 190 (406)
T ss_dssp HCSEEEEESSGGGGG-HHHHHHHCTTSEEEEEESSCHH---------HHT-CCH--HHHHHHHHHGGGCSEEEESCGGGG
T ss_pred CCCEEEECCchHHHH-HHHHHHhCCCEEEEEeccchhh---------ccc-ccH--HHHHHHHHHHHhCCEEEEcCHHHH
Confidence 689999443222221 2455678999999999752200 000 000 111235567899999999998765
Q ss_pred hhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCc
Q 036539 447 AGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGY 526 (749)
Q Consensus 447 ~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~ 526 (749)
+... . .. ++.+||||+|.+.|.+....
T Consensus 191 ~~~~------------------------~-~~-~i~vipngvd~~~f~~~~~~--------------------------- 217 (406)
T 2hy7_A 191 AEVV------------------------S-RD-NVFHVGHGVDHNLDQLGDPS--------------------------- 217 (406)
T ss_dssp GGCS------------------------C-ST-TEEECCCCBCTTHHHHHCSC---------------------------
T ss_pred HHHH------------------------h-cC-CEEEEcCCcChHhcCccccc---------------------------
Confidence 5111 0 02 89999999998766432100
Q ss_pred cCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEe
Q 036539 527 LADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWI 606 (749)
Q Consensus 527 l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 606 (749)
...++++|+|+||+.+.||+ +..+.+..++++|+|+|+|+ ++++++.++|+|+
T Consensus 218 -~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~~l~ivG~g~--------------------~~~~~l~~~V~f~ 270 (406)
T 2hy7_A 218 -PYAEGIHAVAVGSMLFDPEF------FVVASKAFPQVTFHVIGSGM--------------------GRHPGYGDNVIVY 270 (406)
T ss_dssp -SCCSSEEEEEECCTTBCHHH------HHHHHHHCTTEEEEEESCSS--------------------CCCTTCCTTEEEE
T ss_pred -ccCCCcEEEEEeccccccCH------HHHHHHhCCCeEEEEEeCch--------------------HHhcCCCCCEEEc
Confidence 02334789999999999998 33334446789999999874 3456788999999
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHH-------HcCCcEEEcCccccccccccCceEEE-ECCCCH
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAM-------NCGLPTFATNQGGPAEIIVDGVSGFH-IDPYNG 678 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAM-------a~GlPVVat~~GG~~EiI~dg~~G~l-v~p~d~ 678 (749)
| .++.+++..+|+. +|++|+||..|+||++++||| +||+|||+|+. +.++.+|++ ++|+|+
T Consensus 271 G----~~~~~~l~~~~~~-adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v~~~d~ 339 (406)
T 2hy7_A 271 G----EMKHAQTIGYIKH-ARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGYTPGNA 339 (406)
T ss_dssp C----CCCHHHHHHHHHT-CSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEECTTCH
T ss_pred C----CCCHHHHHHHHHh-cCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEEeCCCCH
Confidence 9 7778999999995 999999999999999999999 99999999987 677889999 999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH--HHH
Q 036539 679 DESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNM--GCM 729 (749)
Q Consensus 679 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l--y~~ 729 (749)
+++|++|.+++ +|++ + ...++|||+.++++++++ |..
T Consensus 340 ~~la~ai~~ll----~~~~---------~-~~~~~~sw~~~a~~~~~~~~y~~ 378 (406)
T 2hy7_A 340 DSVIAAITQAL----EAPR---------V-RYRQCLNWSDTTDRVLDPRAYPE 378 (406)
T ss_dssp HHHHHHHHHHH----HCCC---------C-CCSCCCBHHHHHHHHHCGGGSGG
T ss_pred HHHHHHHHHHH----hCcc---------h-hhhhcCCHHHHHHHHHHhhcccc
Confidence 99999997655 4554 1 234789999999999998 554
No 19
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.96 E-value=4.9e-29 Score=287.69 Aligned_cols=173 Identities=11% Similarity=0.073 Sum_probs=154.2
Q ss_pred hhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEe-ccCCCCCCcchhHHHHHHHHHHHHHHcCC
Q 036539 521 NEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVG-AFFDPSKSKDREETAEIKKMHALMEKYQL 599 (749)
Q Consensus 521 ~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG-~g~~~~~~~d~ee~~~~~~l~~li~~~~L 599 (749)
++.+|+ ++ .++++++||+.+ ||++.+++++.++.+..|+++|+|+| +|+. .+.++++++++|+
T Consensus 368 r~~~~~--~~-~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~------------~~~l~~~~~~~~l 431 (568)
T 2vsy_A 368 RTQCGL--PE-QGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGEA------------DARLRAFAHAQGV 431 (568)
T ss_dssp TGGGTC--CT-TSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTTH------------HHHHHHHHHHTTC
T ss_pred ccccCC--CC-CCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHHH------------HHHHHHHHHHcCC
Confidence 355776 33 346679999999 99999999999998888999999999 6654 6788999999999
Q ss_pred C-CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEE-------cCcc-------cccccc
Q 036539 600 K-GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFA-------TNQG-------GPAEII 664 (749)
Q Consensus 600 ~-~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVa-------t~~G-------G~~EiI 664 (749)
. ++|+|+| .++.+++..+|+. +|+||+||.+ +||++++|||+||+|||+ |+.| |..|+|
T Consensus 432 ~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v 505 (568)
T 2vsy_A 432 DAQRLVFMP----KLPHPQYLARYRH-ADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMN 505 (568)
T ss_dssp CGGGEEEEC----CCCHHHHHHHGGG-CSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGB
T ss_pred ChhHEEeeC----CCCHHHHHHHHhc-CCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhh
Confidence 8 9999999 7778899999995 9999999999 999999999999999999 9999 999998
Q ss_pred ccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH--HHhCCHHHHHHHHHHHHHH
Q 036539 665 VDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRI--NECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 665 ~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v--~~~ysw~~~a~~ll~ly~~ 729 (749)
.+ |+++++++|.++ .+|++.+++|++++++++ .++|||+.++++++++|+.
T Consensus 506 ~~----------~~~~la~~i~~l----~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~ 558 (568)
T 2vsy_A 506 VA----------DDAAFVAKAVAL----ASDPAALTALHARVDVLRRASGVFHMDGFADDFGALLQA 558 (568)
T ss_dssp CS----------SHHHHHHHHHHH----HHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHH
T ss_pred cC----------CHHHHHHHHHHH----hcCHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHH
Confidence 65 899999999654 479999999999999998 6889999999999999874
No 20
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.96 E-value=4.5e-29 Score=271.70 Aligned_cols=274 Identities=13% Similarity=0.114 Sum_probs=197.3
Q ss_pred CceEEEEcCCC-chHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHH
Q 036539 367 KPDLIIGNYSD-GNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQE 445 (749)
Q Consensus 367 ~pDIIh~h~~~-~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~ 445 (749)
+||+||+|... .++.+.++++..++|++.+.|+... + . .|.. +. .........+.+|.++++|...
T Consensus 95 ~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~--~---~-~~~~------~~-~~~~~~~~~~~~d~ii~~s~~~ 161 (375)
T 3beo_A 95 KPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLRT--W---D-KYSP------YP-EEMNRQLTGVMADLHFSPTAKS 161 (375)
T ss_dssp CCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCCCC--S---C-TTSS------TT-HHHHHHHHHHHCSEEEESSHHH
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccc--c---c-ccCC------Ch-hHhhhhHHhhhhheeeCCCHHH
Confidence 89999998753 3566677788899999988776511 0 0 0100 00 0111223345599999999877
Q ss_pred HhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCC-CCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 446 IAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPG-ADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 446 ~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnG-vD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
.+.. ...|++ ..++.+|+|| +|...+.+....... .++.+
T Consensus 162 ~~~~--------------------~~~g~~--~~~i~vi~n~~~d~~~~~~~~~~~~~-----------------~~~~~ 202 (375)
T 3beo_A 162 ATNL--------------------QKENKD--ESRIFITGNTAIDALKTTVKETYSHP-----------------VLEKL 202 (375)
T ss_dssp HHHH--------------------HHTTCC--GGGEEECCCHHHHHHHHHCCSSCCCH-----------------HHHTT
T ss_pred HHHH--------------------HHcCCC--cccEEEECChhHhhhhhhhhhhhhHH-----------------HHHhc
Confidence 6511 122544 5689999999 786554332100000 00111
Q ss_pred CccCCCCCcEEEEEecccCC-CCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHc-CCCCc
Q 036539 525 GYLADRKKPIIFSMARLDVV-KNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKY-QLKGQ 602 (749)
Q Consensus 525 g~l~~~~k~vIl~vGRL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~-~L~~~ 602 (749)
++++.+++++||+.+. ||++.|++|+.++.+..|++++++ |+++. ..+.+.++++ +..++
T Consensus 203 ----~~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~-------------~~~~~~~~~~~~~~~~ 264 (375)
T 3beo_A 203 ----GNNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMN-------------PVVRETANDILGDYGR 264 (375)
T ss_dssp ----TTSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSC-------------HHHHHHHHHHHTTCTT
T ss_pred ----cCCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCC-------------HHHHHHHHHHhhccCC
Confidence 2344567899999876 999999999999987778898654 65644 1222233332 33468
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCceEEEECCCCHHHH
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN-QGGPAEIIVDGVSGFHIDPYNGDES 681 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~-~GG~~EiI~dg~~G~lv~p~d~e~l 681 (749)
|.|+| .++..++..+|+. +|++|+|| |.+++|||+||+|||+|+ .||..|++.+| +|+++++ |++++
T Consensus 265 v~~~g----~~~~~~~~~~~~~-ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v~~-d~~~l 332 (375)
T 3beo_A 265 IHLIE----PLDVIDFHNVAAR-SYLMLTDS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLAGT-DEETI 332 (375)
T ss_dssp EEEEC----CCCHHHHHHHHHT-CSEEEECC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEECCS-CHHHH
T ss_pred EEEeC----CCCHHHHHHHHHh-CcEEEECC-----CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEcCC-CHHHH
Confidence 99998 6667799999995 99999999 778999999999999996 59999999888 9999986 99999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 682 SDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 682 A~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
+++|.+++ +|++.+++|+++++++. +.|+|+.+++.+.+++
T Consensus 333 a~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~ 373 (375)
T 3beo_A 333 FSLADELL----SDKEAHDKMSKASNPYG-DGRASERIVEAILKHF 373 (375)
T ss_dssp HHHHHHHH----HCHHHHHHHCCCCCTTC-CSCHHHHHHHHHHHHT
T ss_pred HHHHHHHH----hChHhHhhhhhcCCCCC-CCcHHHHHHHHHHHHh
Confidence 99996554 79999999999998876 6899999999998865
No 21
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.96 E-value=3.5e-28 Score=276.22 Aligned_cols=315 Identities=11% Similarity=0.032 Sum_probs=209.3
Q ss_pred CCceEEEEcCCCchHHHHHHHHcC-CCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 366 GKPDLIIGNYSDGNLVASVMASKL-GITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 366 ~~pDIIh~h~~~~~lva~lla~~~-gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
..+|+||+|.+...+++.+++++. ++|++++.|.. ++.+. .|..+ + ....-...+..+|.+...+..
T Consensus 122 ~~~DiV~vHdyhl~~l~~~lr~~~~~~~i~~~~H~p----fp~~~-~~~~l-p------~~~~il~~ll~~d~i~f~~~~ 189 (482)
T 1uqt_A 122 QDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIP----FPTPE-IFNAL-P------TYDTLLEQLCDYDLLGFQTEN 189 (482)
T ss_dssp CTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSC----CCCHH-HHTTS-T------THHHHHHHHTTSSEEEESSHH
T ss_pred CCCCEEEEECchHHHHHHHHHHhCCCCcEEEEEcCC----CCCHH-HHhhC-c------cHHHHHHhhhccCeEEEECHH
Confidence 367999999987777777776654 79999999974 22221 11111 0 000011234567777776654
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
............-... ....+. ....| ...++.+||||||.+.|.+....... ++ ....++.+
T Consensus 190 ~~~~f~~~~~~~l~~~-~~~~~~-~~~~g---~~~~v~vip~GID~~~f~~~~~~~~~--------~~----~~~lr~~~ 252 (482)
T 1uqt_A 190 DRLAFLDCLSNLTRVT-TRSAKS-HTAWG---KAFRTEVYPIGIEPKEIAKQAAGPLP--------PK----LAQLKAEL 252 (482)
T ss_dssp HHHHHHHHHHHHSCEE-EETTTE-EEETT---EEEEEEECCCCCCHHHHHHHHHSCCC--------HH----HHHHHHHT
T ss_pred HHHHHHHHHHHHhCCc-cccCCe-EEECC---eEEEEEEEeccCCHHHHHHHhcCcch--------HH----HHHHHHHh
Confidence 3331100000000000 000000 00011 13578999999998877542110000 00 00012223
Q ss_pred CccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCC----CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHc---
Q 036539 525 GYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRN----LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKY--- 597 (749)
Q Consensus 525 g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~--- 597 (749)
| ++++|+++||+++.||++.+++|++++.+.+| +++|+++|++.. ..-++..+..+++.+++.+.
T Consensus 253 ~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~---~~~~~~~~l~~~l~~l~~~in~~ 324 (482)
T 1uqt_A 253 K-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR---GDVQAYQDIRHQLENEAGRINGK 324 (482)
T ss_dssp T-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCS---TTSHHHHHHHHHHHHHHHHHHHH
T ss_pred C-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCc---cchHHHHHHHHHHHHHHHHHhhh
Confidence 3 57899999999999999999999999976665 478999997532 11122223445566666553
Q ss_pred -CCC--CcEEEe-cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC-----cEEEcCccccccccccCc
Q 036539 598 -QLK--GQMRWI-AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL-----PTFATNQGGPAEIIVDGV 668 (749)
Q Consensus 598 -~L~--~~V~fl-G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~Gl-----PVVat~~GG~~EiI~dg~ 668 (749)
+.. ..|.|+ | .++.+++..+|+ +||+||+||..||||++++|||+||+ |+|+|+.+|..+.+.
T Consensus 325 ~g~~~~~~v~~~~g----~v~~~el~~ly~-~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~--- 396 (482)
T 1uqt_A 325 YGQLGWTPLYYLNQ----HFDRKLLMKIFR-YSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT--- 396 (482)
T ss_dssp HCBTTBCSEEEECS----CCCHHHHHHHHH-HCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---
T ss_pred cccCCCceEEEeCC----CCCHHHHHHHHH-HccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhC---
Confidence 222 247764 5 788999999999 59999999999999999999999997 999999988888882
Q ss_pred eEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 669 SGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 669 ~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+|++++|.|++++|++|.+++ ..+++.++++++++++++ ++|||+..++++++.|+.
T Consensus 397 ~g~lv~p~d~~~lA~ai~~lL---~~~~~~r~~~~~~~~~~v-~~~s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 397 SALIVNPYDRDEVAAALDRAL---TMSLAERISRHAEMLDVI-VKNDINHWQECFISDLKQ 453 (482)
T ss_dssp TSEEECTTCHHHHHHHHHHHH---TCCHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHH
T ss_pred CeEEECCCCHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHh
Confidence 789999999999999997654 236788999999999998 569999999999998854
No 22
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.95 E-value=2.5e-28 Score=266.91 Aligned_cols=286 Identities=10% Similarity=0.085 Sum_probs=199.5
Q ss_pred CceEEEEcCC-CchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHH
Q 036539 367 KPDLIIGNYS-DGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQE 445 (749)
Q Consensus 367 ~pDIIh~h~~-~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~ 445 (749)
+||+||+|.. ..++.+.++++..|+|++.+.|++.... .|..+ .. ........+.+|.++++|...
T Consensus 86 ~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~~~------~~~~~------~~-~~~~~~~~~~~d~ii~~s~~~ 152 (384)
T 1vgv_A 86 KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGD------LYSPW------PE-EANRTLTGHLAMYHFSPTETS 152 (384)
T ss_dssp CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSC------TTSST------TH-HHHHHHHHTTCSEEEESSHHH
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccccc------ccCCC------ch-HhhHHHHHhhccEEEcCcHHH
Confidence 8999999976 4456667778889999999988763100 01100 00 011122245699999999877
Q ss_pred HhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCC-CCCCCCCCchHHhhhhccchhhHHhhccccchhhhc
Q 036539 446 IAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGA-DQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHI 524 (749)
Q Consensus 446 ~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGv-D~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 524 (749)
.+.. ...|++ ..++.+++||+ |...+.+ ...... +.. ....++.+
T Consensus 153 ~~~l--------------------~~~g~~--~~~i~vi~n~~~d~~~~~~-~~~~~~-----~~~------~~~~~~~~ 198 (384)
T 1vgv_A 153 RQNL--------------------LRENVA--DSRIFITGNTVIDALLWVR-DQVMSS-----DKL------RSELAANY 198 (384)
T ss_dssp HHHH--------------------HHTTCC--GGGEEECCCHHHHHHHHHH-HHTTTC-----HHH------HHHHHTTC
T ss_pred HHHH--------------------HHcCCC--hhhEEEeCChHHHHHHhhh-hccccc-----hhh------hHHHHHhc
Confidence 6511 123554 56899999995 4321111 000000 000 00112334
Q ss_pred C-ccCCCCC-cEEEEEecccCC-CCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCC
Q 036539 525 G-YLADRKK-PIIFSMARLDVV-KNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKG 601 (749)
Q Consensus 525 g-~l~~~~k-~vIl~vGRL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~ 601 (749)
| + ++++ .+++++||+.+. ||++.|++|+.++.+..++++|+++++... ...+.+++++. ..+
T Consensus 199 ~~~--~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~----------~~~~~l~~~~~---~~~ 263 (384)
T 1vgv_A 199 PFI--DPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNP----------NVREPVNRILG---HVK 263 (384)
T ss_dssp TTC--CTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCH----------HHHHHHHHHHT---TCT
T ss_pred ccc--CCCCCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCCH----------HHHHHHHHHhh---cCC
Confidence 5 4 3333 468899999876 999999999999987778899988644211 12344444432 246
Q ss_pred cEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCHHH
Q 036539 602 QMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ-GGPAEIIVDGVSGFHIDPYNGDE 680 (749)
Q Consensus 602 ~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~-GG~~EiI~dg~~G~lv~p~d~e~ 680 (749)
+|+|+| .++.+++..+|+. ||++|+|| |.+++|||+||+|||+|+. ||..|++.+| +|+++++ |+++
T Consensus 264 ~v~~~g----~~~~~~~~~~~~~-ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv~~-d~~~ 331 (384)
T 1vgv_A 264 NVILID----PQEYLPFVWLMNH-AWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-DKQR 331 (384)
T ss_dssp TEEEEC----CCCHHHHHHHHHH-CSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEECS-SHHH
T ss_pred CEEEeC----CCCHHHHHHHHHh-CcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEeCC-CHHH
Confidence 899988 5666899999995 99999999 4458999999999999986 9999999888 9999988 9999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhH
Q 036539 681 SSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMYS 731 (749)
Q Consensus 681 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~~ 731 (749)
++++|.+++ +||+.+++|+++++++. +.|+|+.+++.++++|+..|
T Consensus 332 la~~i~~ll----~d~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~ 377 (384)
T 1vgv_A 332 IVEEVTRLL----KDENEYQAMSRAHNPYG-DGQACSRILEALKNNRISLG 377 (384)
T ss_dssp HHHHHHHHH----HCHHHHHHHHSSCCTTC-CSCHHHHHHHHHHHTCCCC-
T ss_pred HHHHHHHHH----hChHHHhhhhhccCCCc-CCCHHHHHHHHHHHHHHhhc
Confidence 999996554 79999999999998875 78999999999998765443
No 23
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.95 E-value=2.1e-27 Score=236.17 Aligned_cols=191 Identities=20% Similarity=0.222 Sum_probs=160.6
Q ss_pred ecCCCCCCCCC--CCch-HHhhhhccchhhHHhhccccchhhhcCccCCCCCcEEEEEeccc-CCCCHHHHHHHHHHhH-
Q 036539 484 AAPGADQSVYF--PYTE-KQRRLTKFHPEIEELLYNKEDNNEHIGYLADRKKPIIFSMARLD-VVKNLTGLTEWYGKNK- 558 (749)
Q Consensus 484 IpnGvD~~~f~--p~~~-~~~rl~~~~~~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~-~~Kgl~~LieA~~~l~- 558 (749)
||||+|.+.|. |... .... ....++.+|+ +++++|+|+||+. +.||++.+++++..+.
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~--------------~~~~r~~~~~---~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~ 64 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDER--------------KKSLLSKFGM---DEGVTFMFIGRFDRGQKGVDVLLKAIEILSS 64 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHH--------------HHHHHHHTTC---CSCEEEEEESCBCSSSSCHHHHHHHHHHHTT
T ss_pred CCCccChhhccccccccchhhH--------------HHHHHHHcCC---CCCCEEEEeeccccccCCHHHHHHHHHHHHh
Confidence 79999999998 7642 0000 0012345676 3456999999999 9999999999999997
Q ss_pred -ccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEE-ecCccCcCChHHHHHHHHccCcEEEECCCCC
Q 036539 559 -RLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRW-IAAQSDRLRNGELYRCIADTKGAFVQPALYE 636 (749)
Q Consensus 559 -~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~f-lG~~~~~~~~~el~~~la~aadvfV~PS~~E 636 (749)
+..++++|+|+|+++. ++.+.+.+++++++ +|+| +| .++.+++..+|+. +|++|+||.+|
T Consensus 65 ~~~~~~~~l~i~G~~~~----------~~~~~l~~~~~~~~---~v~~~~g----~~~~~~~~~~~~~-ad~~l~ps~~e 126 (200)
T 2bfw_A 65 KKEFQEMRFIIIGKGDP----------ELEGWARSLEEKHG---NVKVITE----MLSREFVRELYGS-VDFVIIPSYFE 126 (200)
T ss_dssp SGGGGGEEEEEECCBCH----------HHHHHHHHHHHHCT---TEEEECS----CCCHHHHHHHHTT-CSEEEECCSCC
T ss_pred hccCCCeEEEEECCCCh----------HHHHHHHHHHHhcC---CEEEEec----cCCHHHHHHHHHH-CCEEEECCCCC
Confidence 6678999999999862 23677888888886 8999 99 7788999999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhCC
Q 036539 637 AFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKV-DPTYWNKFSTEGLKRINECYT 715 (749)
Q Consensus 637 ~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~-dp~~~~~ms~~a~~~v~~~ys 715 (749)
+||++++|||+||+|||+|+.||..|++ ++.+|++++++|+++++++|.+++ + |++.+++|++++++++.+ ||
T Consensus 127 ~~~~~~~Ea~a~G~PvI~~~~~~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~a~~~~~~-fs 200 (200)
T 2bfw_A 127 PFGLVALEAMCLGAIPIASAVGGLRDII-TNETGILVKAGDPGELANAILKAL----ELSRSDLSKFRENCKKRAMS-FS 200 (200)
T ss_dssp SSCHHHHHHHHTTCEEEEESCHHHHHHC-CTTTCEEECTTCHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHHH-TC
T ss_pred CccHHHHHHHHCCCCEEEeCCCChHHHc-CCCceEEecCCCHHHHHHHHHHHH----hcCHHHHHHHHHHHHHHHHh-cC
Confidence 9999999999999999999999999999 999999999999999999996544 7 999999999999999977 86
No 24
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.94 E-value=3.8e-26 Score=220.54 Aligned_cols=163 Identities=21% Similarity=0.232 Sum_probs=141.4
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC
Q 036539 532 KPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD 611 (749)
Q Consensus 532 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 611 (749)
+++|+|+||+.+.||++.+++|+.+++ ..++++|+|+|+|+. .+.+.++++++++ +|.| |
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~-~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~--~v~~-g---- 61 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSK-YKQDIVLLLKGKGPD------------EKKIKLLAQKLGV--KAEF-G---- 61 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCT-TGGGEEEEEECCSTT------------HHHHHHHHHHHTC--EEEC-C----
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhc-cCCCeEEEEEeCCcc------------HHHHHHHHHHcCC--eEEE-e----
Confidence 568999999999999999999999985 347899999999977 6788899999987 8999 9
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC-cEEE-cCccccccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL-PTFA-TNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~Gl-PVVa-t~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.++.+++..+|+. +|++|+||.+|+||++++|||+||+ |||+ ++.||..|++.++.+ +++++|+++++++|.+++
T Consensus 62 ~~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 62 FVNSNELLEILKT-CTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LFEPNNAKDLSAKIDWWL 138 (166)
T ss_dssp CCCHHHHHHHHTT-CSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EECTTCHHHHHHHHHHHH
T ss_pred ecCHHHHHHHHHh-CCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EEcCCCHHHHHHHHHHHH
Confidence 7778999999995 9999999999999999999999998 9999 568899999988655 789999999999996654
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 036539 690 EACKVDPTYWNKFSTEGLKRINECYTWKIYANK 722 (749)
Q Consensus 690 ~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ 722 (749)
+|++.+++|++++++++ ++|||+.++++
T Consensus 139 ----~~~~~~~~~~~~~~~~~-~~~s~~~~~~~ 166 (166)
T 3qhp_A 139 ----ENKLERERMQNEYAKSA-LNYTLENSVIQ 166 (166)
T ss_dssp ----HCHHHHHHHHHHHHHHH-HHHC-------
T ss_pred ----hCHHHHHHHHHHHHHHH-HHCChhhhhcC
Confidence 69999999999999998 89999998764
No 25
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.93 E-value=5.5e-25 Score=248.46 Aligned_cols=320 Identities=10% Similarity=0.051 Sum_probs=221.6
Q ss_pred HHHHHHHHHcC-CCceEEEEcCCCchHHHHHHHHc-CCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHh
Q 036539 355 DATTMILEFLG-GKPDLIIGNYSDGNLVASVMASK-LGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAM 432 (749)
Q Consensus 355 ~~~~~l~~~l~-~~pDIIh~h~~~~~lva~lla~~-~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~ 432 (749)
..+..+....+ ..-|+|..|.+...+++.++.++ -+.++.+..|.- +|.+.+ |..+... ....-...|
T Consensus 136 ~fA~~i~~~~~~~~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiP----fPs~e~-f~~Lp~~-----~r~ell~gl 205 (496)
T 3t5t_A 136 DFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIP----WPSADY-WRILPKE-----IRTGILHGM 205 (496)
T ss_dssp HHHHHHHHHTTTCSSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSC----CCCHHH-HTTSCHH-----HHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCC----CCCHHH-HhhCcHh-----HHHHHHHHH
Confidence 44445555443 35689999999987777777664 468899999965 333322 1111000 001113368
Q ss_pred hhCCEEEeCCHHHHhhcCCCCCccccccccccccchh--hhccCCCC--CCceEEecCCCCCCCCCCCchHHhhhhccch
Q 036539 433 NATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCR--VVKGIDVL--DPKFNIAAPGADQSVYFPYTEKQRRLTKFHP 508 (749)
Q Consensus 433 ~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~--v~~Gi~~~--~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~ 508 (749)
-.+|.|...|+..+..+.+..... +|++.. ...++... ..++.++|+|||++.|.+..... +
T Consensus 206 l~~DligF~t~~y~~~Fl~~~~r~-------l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~-~------ 271 (496)
T 3t5t_A 206 LPATTIGFFADRWCRNFLESVADL-------LPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQL-P------ 271 (496)
T ss_dssp TTSSEEEESSHHHHHHHHHHHHHH-------CTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCC-C------
T ss_pred HhCCEEEEecHHHHHHHHHHHHHH-------hcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHH-H------
Confidence 899999999987765321110000 000000 00011111 23788999999999997654210 0
Q ss_pred hhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCC---eEEEEEeccCCCCCCcchhHHH
Q 036539 509 EIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNL---VNLVIVGAFFDPSKSKDREETA 585 (749)
Q Consensus 509 ~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~---v~LvIVG~g~~~~~~~d~ee~~ 585 (749)
...++.+| ++++|+++||+++.||+..+++|| ++.+.+|+ +.|++||.... ...++..+
T Consensus 272 ---------~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr---~~~~~y~~ 333 (496)
T 3t5t_A 272 ---------EGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNR---LYVPANAD 333 (496)
T ss_dssp ---------TTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCC---TTSHHHHH
T ss_pred ---------HHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCC---CCchHHHH
Confidence 11122333 578999999999999999999999 88766665 67998886432 11233334
Q ss_pred HHHHHHHHHHHcC----CCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcC---CcEEEcCcc
Q 036539 586 EIKKMHALMEKYQ----LKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCG---LPTFATNQG 658 (749)
Q Consensus 586 ~~~~l~~li~~~~----L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~G---lPVVat~~G 658 (749)
..+++.+++.+.+ .. .|+|+| .++.+++..+|+ +||+||+||.+||||++++|||+|| .|+|+|..+
T Consensus 334 l~~~l~~lv~~in~~~g~~-~V~f~g----~v~~~el~aly~-~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~a 407 (496)
T 3t5t_A 334 YVHRVETAVAEANAELGSD-TVRIDN----DNDVNHTIACFR-RADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETC 407 (496)
T ss_dssp HHHHHHHHHHHHHHHHCTT-SEEEEE----CCCHHHHHHHHH-HCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTB
T ss_pred HHHHHHHHHHHhccccCCc-CEEEeC----CCCHHHHHHHHH-hccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCC
Confidence 4556666666543 22 699999 678899999999 5999999999999999999999997 899999999
Q ss_pred ccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 659 GPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 659 G~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
|..+.+. .+|++++|.|++++|++|.+++. .+++.++++.++.++++ .++|+...++.+++-.+
T Consensus 408 Ga~~~l~--~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~V-~~~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 408 GAAEVLG--EYCRSVNPFDLVEQAEAISAALA---AGPRQRAEAAARRRDAA-RPWTLEAWVQAQLDGLA 471 (496)
T ss_dssp TTHHHHG--GGSEEECTTBHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHH-TTCBHHHHHHHHHHHHH
T ss_pred CCHHHhC--CCEEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHh
Confidence 9999883 47999999999999999987653 56788899999999998 78999999999987654
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.92 E-value=1.9e-24 Score=235.91 Aligned_cols=270 Identities=12% Similarity=0.041 Sum_probs=182.6
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHH
Q 036539 366 GKPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQ 444 (749)
Q Consensus 366 ~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~ 444 (749)
.+||+||+|.... ++.+.++++..|+|++++.|+... |..... +. .........+.+|.++++|..
T Consensus 90 ~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~---------~~~~~~---~~-~~~~~~~~~~~~~~~~~~s~~ 156 (376)
T 1v4v_A 90 MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRS---------GNLKEP---FP-EEANRRLTDVLTDLDFAPTPL 156 (376)
T ss_dssp TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCC---------SCTTSS---TT-HHHHHHHHHHHCSEEEESSHH
T ss_pred cCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCCcc---------ccccCC---Cc-hHHHHHHHHHHhceeeCCCHH
Confidence 4899999987643 455677888899998755444311 100000 00 001223455679999999987
Q ss_pred HHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCC-CCCCCCCCchHHhhhhccchhhHHhhccccchhhh
Q 036539 445 EIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGA-DQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEH 523 (749)
Q Consensus 445 ~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGv-D~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 523 (749)
..+.. ...|++ ..++.+++|++ |...+.+ . + . ..++.
T Consensus 157 ~~~~l--------------------~~~g~~--~~ki~vi~n~~~d~~~~~~----~-~-~--------------~~~~~ 194 (376)
T 1v4v_A 157 AKANL--------------------LKEGKR--EEGILVTGQTGVDAVLLAA----K-L-G--------------RLPEG 194 (376)
T ss_dssp HHHHH--------------------HTTTCC--GGGEEECCCHHHHHHHHHH----H-H-C--------------CCCTT
T ss_pred HHHHH--------------------HHcCCC--cceEEEECCchHHHHhhhh----h-h-h--------------HHHHh
Confidence 66511 122554 56899999965 4211100 0 0 0 00111
Q ss_pred cCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEE-eccCCCCCCcchhHHHHHHHHHHHHHHcCCCCc
Q 036539 524 IGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIV-GAFFDPSKSKDREETAEIKKMHALMEKYQLKGQ 602 (749)
Q Consensus 524 ~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIV-G~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~ 602 (749)
+ ++++.+++++||+...||++.+++|+.++.+..++++++++ |+++. ..+.+++++. ..++
T Consensus 195 ~----~~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~-----------~~~~l~~~~~---~~~~ 256 (376)
T 1v4v_A 195 L----PEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPV-----------VREAVFPVLK---GVRN 256 (376)
T ss_dssp C----CSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHH-----------HHHHHHHHHT---TCTT
T ss_pred c----CCCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCHH-----------HHHHHHHHhc---cCCC
Confidence 1 23445677899998888999999999999877788998886 54421 1344555443 2468
Q ss_pred EEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHH
Q 036539 603 MRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT-NQGGPAEIIVDGVSGFHIDPYNGDES 681 (749)
Q Consensus 603 V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat-~~GG~~EiI~dg~~G~lv~p~d~e~l 681 (749)
|+|+| .+...++..+|+ ++|++|.|| + |+ ++|||+||+|||++ +.||..+++.++ +|++++ .|++++
T Consensus 257 v~~~g----~~g~~~~~~~~~-~ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv~-~d~~~l 324 (376)
T 1v4v_A 257 FVLLD----PLEYGSMAALMR-ASLLLVTDS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLAG-TDPEGV 324 (376)
T ss_dssp EEEEC----CCCHHHHHHHHH-TEEEEEESC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEECC-SCHHHH
T ss_pred EEEEC----CCCHHHHHHHHH-hCcEEEECC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEECC-CCHHHH
Confidence 99998 555668999999 599999999 2 44 88999999999997 678999987655 899996 499999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 682 SDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 682 A~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
+++|.+ +++|++.+++|++++ +.|.|...++++.+++..
T Consensus 325 a~~i~~----ll~d~~~~~~~~~~~-----~~~~~~~~~~~i~~~i~~ 363 (376)
T 1v4v_A 325 YRVVKG----LLENPEELSRMRKAK-----NPYGDGKAGLMVARGVAW 363 (376)
T ss_dssp HHHHHH----HHTCHHHHHHHHHSC-----CSSCCSCHHHHHHHHHHH
T ss_pred HHHHHH----HHhChHhhhhhcccC-----CCCCCChHHHHHHHHHHH
Confidence 999965 448999999998643 456666666776666543
No 27
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.90 E-value=1.4e-23 Score=205.94 Aligned_cols=151 Identities=22% Similarity=0.249 Sum_probs=133.1
Q ss_pred CCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHH--HcCCCCcEEEe
Q 036539 529 DRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALME--KYQLKGQMRWI 606 (749)
Q Consensus 529 ~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~--~~~L~~~V~fl 606 (749)
+.++++|+|+||+.+.||++.+++++.++ ++++|+|+|+++. .+.++++++ ++++.++|.|+
T Consensus 20 ~~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G~~~~------------~~~l~~~~~~~~~~l~~~v~~~ 83 (177)
T 2f9f_A 20 KCYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSK------------GDHAERYARKIMKIAPDNVKFL 83 (177)
T ss_dssp CCCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCT------------TSTHHHHHHHHHHHSCTTEEEE
T ss_pred CCCCCEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEecCcc------------HHHHHHHHHhhhcccCCcEEEe
Confidence 67788999999999999999999999987 4799999999876 345777777 77888999999
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHH
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIA 686 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~ 686 (749)
| .++.+++..+|+. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++ +.|+++++++|.
T Consensus 84 g----~~~~~e~~~~~~~-adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~~~i~ 157 (177)
T 2f9f_A 84 G----SVSEEELIDLYSR-CKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-NADVNEIIDAMK 157 (177)
T ss_dssp E----SCCHHHHHHHHHH-CSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHHHHHH
T ss_pred C----CCCHHHHHHHHHh-CCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHHHHHH
Confidence 9 7888999999995 999999999999999999999999999999999999999999999999 999999999996
Q ss_pred HHHHHhcCCHHH-HHHHHHH
Q 036539 687 DFFEACKVDPTY-WNKFSTE 705 (749)
Q Consensus 687 ~~l~~l~~dp~~-~~~ms~~ 705 (749)
+++ +|++. +++++++
T Consensus 158 ~l~----~~~~~~~~~~~~~ 173 (177)
T 2f9f_A 158 KVS----KNPDKFKKDCFRR 173 (177)
T ss_dssp HHH----HCTTTTHHHHHHH
T ss_pred HHH----hCHHHHHHHHHHH
Confidence 655 56664 3443333
No 28
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.90 E-value=2.9e-23 Score=228.58 Aligned_cols=207 Identities=13% Similarity=0.091 Sum_probs=158.3
Q ss_pred HHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccch
Q 036539 429 TIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHP 508 (749)
Q Consensus 429 ~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~ 508 (749)
+..++.+|.|++.|...++.. ...|++ ++.|++||. |.+.... +
T Consensus 148 ~~~~~~~d~ii~~S~~~~~~l--------------------~~~g~~----ki~vi~n~~----f~~~~~~--~------ 191 (374)
T 2xci_A 148 KILSKKFDLIIMRTQEDVEKF--------------------KTFGAK----RVFSCGNLK----FICQKGK--G------ 191 (374)
T ss_dssp HHHHTTCSEEEESCHHHHHHH--------------------HTTTCC----SEEECCCGG----GCCCCCS--C------
T ss_pred HHHHHhCCEEEECCHHHHHHH--------------------HHcCCC----eEEEcCCCc----cCCCcCh--h------
Confidence 346789999999998877621 112442 899999973 2221100 0
Q ss_pred hhHHhhccccchhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHH
Q 036539 509 EIEELLYNKEDNNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIK 588 (749)
Q Consensus 509 ~~~~~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~ 588 (749)
+ .-.++++++.|+ ..||++.|++|+.++.+..|+++|+|+|+|+. ..+
T Consensus 192 -------------~------~l~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~-----------~~~ 239 (374)
T 2xci_A 192 -------------I------KLKGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIE-----------NAK 239 (374)
T ss_dssp -------------C------CCSSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGG-----------GHH
T ss_pred -------------h------hhcCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHH-----------HHH
Confidence 0 011257777665 46899999999999988889999999998875 124
Q ss_pred HHHHHHHHcCCC--------CcEEEecCccCcCChHHHHHHHHccCcEEEECCCC-CCCcHHHHHHHHcCCcEEEc-Ccc
Q 036539 589 KMHALMEKYQLK--------GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALY-EAFGLTVIEAMNCGLPTFAT-NQG 658 (749)
Q Consensus 589 ~l~~li~~~~L~--------~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~-E~fGLtvlEAMa~GlPVVat-~~G 658 (749)
++.++++++++. .+|.+.|.+ +++..+|+ .+|++++||.+ |++|++++|||+||+|||++ +.+
T Consensus 240 ~l~~~~~~~gl~~~~~~~~~~~v~~~~~~------~dl~~~y~-~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~ 312 (374)
T 2xci_A 240 IFEKKARDFGFKTSFFENLEGDVILVDRF------GILKELYP-VGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTH 312 (374)
T ss_dssp HHHHHHHHTTCCEEETTCCCSSEEECCSS------SCHHHHGG-GEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCT
T ss_pred HHHHHHHHCCCceEEecCCCCcEEEECCH------HHHHHHHH-hCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCcc
Confidence 688888888886 467887732 47899999 49998888654 67899999999999999985 789
Q ss_pred ccccccccC-ceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 036539 659 GPAEIIVDG-VSGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYT 715 (749)
Q Consensus 659 G~~EiI~dg-~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ys 715 (749)
|..|++.+. .+|++++++|+++++++|.+++ +| +.+++|+++|++++++++.
T Consensus 313 ~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll----~d-~~r~~mg~~ar~~~~~~~g 365 (374)
T 2xci_A 313 KVNDLKEFLEKEGAGFEVKNETELVTKLTELL----SV-KKEIKVEEKSREIKGCYLE 365 (374)
T ss_dssp TSHHHHHHHHHTTCEEECCSHHHHHHHHHHHH----HS-CCCCCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHHHHhccc
Confidence 999988763 5788899999999999996655 68 8899999999999976553
No 29
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.82 E-value=3.2e-19 Score=193.71 Aligned_cols=248 Identities=10% Similarity=0.027 Sum_probs=175.2
Q ss_pred CCCceEEEEcCCCc---hHHHHHHHH--cCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEE
Q 036539 365 GGKPDLIIGNYSDG---NLVASVMAS--KLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFII 439 (749)
Q Consensus 365 ~~~pDIIh~h~~~~---~lva~lla~--~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~II 439 (749)
-.++|+|+.+++.. .+.+.++.+ +.++|+++.+|+++...+. ... +.. ..|+..++.||.||
T Consensus 72 ~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~---------~~~--~~~--~~E~~~y~~aD~Ii 138 (339)
T 3rhz_A 72 LRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFS---------GNF--YLM--DRTIAYYNKADVVV 138 (339)
T ss_dssp CCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCG---------GGG--GGH--HHHHHHHTTCSEEE
T ss_pred CCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCc---------cch--hhH--HHHHHHHHHCCEEE
Confidence 35899999988764 223445554 4599999999999653321 011 111 25788999999999
Q ss_pred eCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccc
Q 036539 440 ASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKED 519 (749)
Q Consensus 440 t~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~ 519 (749)
+.|....+ +...+|++ ..++.++++. |... +..
T Consensus 139 ~~S~~~~~--------------------~l~~~G~~--~~ki~~~~~~-~~~~--~~~---------------------- 171 (339)
T 3rhz_A 139 APSQKMID--------------------KLRDFGMN--VSKTVVQGMW-DHPT--QAP---------------------- 171 (339)
T ss_dssp ESCHHHHH--------------------HHHHTTCC--CSEEEECCSC-CCCC--CCC----------------------
T ss_pred ECCHHHHH--------------------HHHHcCCC--cCceeecCCC-CccC--ccc----------------------
Confidence 99988776 22334664 4566444332 2110 100
Q ss_pred hhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCC
Q 036539 520 NNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL 599 (749)
Q Consensus 520 ~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L 599 (749)
.. .+.++++|+|+||+.+...+. ...++++|+|+|+|+. . .+
T Consensus 172 ----~~--~~~~~~~i~yaG~l~k~~~L~----------~l~~~~~f~ivG~G~~------------~----------~l 213 (339)
T 3rhz_A 172 ----MF--PAGLKREIHFPGNPERFSFVK----------EWKYDIPLKVYTWQNV------------E----------LP 213 (339)
T ss_dssp ----CC--CCEEEEEEEECSCTTTCGGGG----------GCCCSSCEEEEESCCC------------C----------CC
T ss_pred ----cc--ccCCCcEEEEeCCcchhhHHH----------hCCCCCeEEEEeCCcc------------c----------Cc
Confidence 00 033567899999999533322 1247899999999987 1 24
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEECCC-------CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEE
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL-------YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFH 672 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~-------~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~G~l 672 (749)
. +|.|+| +++.+++..+++. +|+.+++.. ..++|.+++||||||+|||+++.|+..++|.++.+|+.
T Consensus 214 ~-nV~f~G----~~~~~el~~~l~~-~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~ 287 (339)
T 3rhz_A 214 Q-NVHKIN----YRPDEQLLMEMSQ-GGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGLGWI 287 (339)
T ss_dssp T-TEEEEE----CCCHHHHHHHHHT-EEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEE
T ss_pred C-CEEEeC----CCCHHHHHHHHHh-CCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCeEEE
Confidence 4 899999 8889999999984 677776511 13569999999999999999999999999999999999
Q ss_pred ECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 673 IDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 673 v~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
++ +.++++++|.. + +++.+++|+++|++.. ++++|..++++.+.
T Consensus 288 ~~--~~~e~~~~i~~----l--~~~~~~~m~~na~~~a-~~~~~~~f~k~~l~ 331 (339)
T 3rhz_A 288 VK--DVEEAIMKVKN----V--NEDEYIELVKNVRSFN-PILRKGFFTRRLLT 331 (339)
T ss_dssp ES--SHHHHHHHHHH----C--CHHHHHHHHHHHHHHT-HHHHTTHHHHHHHH
T ss_pred eC--CHHHHHHHHHH----h--CHHHHHHHHHHHHHHH-HHhhccHHHHHHHH
Confidence 97 67888888853 3 5778999999999876 56777666666543
No 30
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.82 E-value=1.5e-19 Score=199.46 Aligned_cols=162 Identities=9% Similarity=0.051 Sum_probs=126.3
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCc
Q 036539 530 RKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQ 609 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~ 609 (749)
+.+.++++.|++. .|+.+.+.+++..+.+. ++++++++++... . +.+. ++.++|++.|
T Consensus 241 ~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~--~~~~~~~~g~~~~-----~------~~l~------~~~~~v~~~~-- 298 (412)
T 3otg_A 241 ARPLVYLTLGTSS-GGTVEVLRAAIDGLAGL--DADVLVASGPSLD-----V------SGLG------EVPANVRLES-- 298 (412)
T ss_dssp TSCEEEEECTTTT-CSCHHHHHHHHHHHHTS--SSEEEEECCSSCC-----C------TTCC------CCCTTEEEES--
T ss_pred CCCEEEEEcCCCC-cCcHHHHHHHHHHHHcC--CCEEEEEECCCCC-----h------hhhc------cCCCcEEEeC--
Confidence 3455678889886 78888888888887654 5777777765430 1 1111 2467999999
Q ss_pred cCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEEEECCC--CHHHHHH
Q 036539 610 SDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEIIVDGVSGFHIDPY--NGDESSD 683 (749)
Q Consensus 610 ~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G----G~~EiI~dg~~G~lv~p~--d~e~lA~ 683 (749)
+++ +..+|+ .+|++|.++ .+.+++|||+||+|+|++..+ +..+.+.++..|+++++. |++++++
T Consensus 299 --~~~---~~~~l~-~ad~~v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ 368 (412)
T 3otg_A 299 --WVP---QAALLP-HVDLVVHHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSG 368 (412)
T ss_dssp --CCC---HHHHGG-GCSEEEESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHH
T ss_pred --CCC---HHHHHh-cCcEEEECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHH
Confidence 442 667777 599999886 248999999999999996554 478888888899999987 8999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 684 KIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 684 aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+|.++ ++||+.+++|++.+++.. +.++|+.+++.+++++.
T Consensus 369 ai~~l----l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 408 (412)
T 3otg_A 369 AAKRL----LAEESYRAGARAVAAEIA-AMPGPDEVVRLLPGFAS 408 (412)
T ss_dssp HHHHH----HHCHHHHHHHHHHHHHHH-HSCCHHHHHTTHHHHHC
T ss_pred HHHHH----HhCHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHhc
Confidence 99654 479999999999998876 78899999999999874
No 31
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.78 E-value=8.3e-18 Score=186.99 Aligned_cols=163 Identities=12% Similarity=0.007 Sum_probs=119.2
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEE-EEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 530 RKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNL-VIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~L-vIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
+++.+++++|++. .++.+.+.+++..+.+. +++++ +++|.+.. .+.+. .+.++|.+.|
T Consensus 231 ~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~-~~~~~~~~~G~~~~------------~~~l~------~~~~~v~~~~- 289 (430)
T 2iyf_A 231 AEKVVLVSLGSAF-TKQPAFYRECVRAFGNL-PGWHLVLQIGRKVT------------PAELG------ELPDNVEVHD- 289 (430)
T ss_dssp CSEEEEEECTTTC-C-CHHHHHHHHHHHTTC-TTEEEEEECC---C------------GGGGC------SCCTTEEEES-
T ss_pred CCCeEEEEcCCCC-CCcHHHHHHHHHHHhcC-CCeEEEEEeCCCCC------------hHHhc------cCCCCeEEEe-
Confidence 3456788999998 56666665655555432 46787 56787754 11121 2467899999
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHHHHH
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHIDPY--NGDESS 682 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~p~--d~e~lA 682 (749)
+++.. .+|+ .+|++|..+- +.+++|||++|+|+|++..++ ..+.+.+...|+.++++ |+++++
T Consensus 290 ---~~~~~---~~l~-~ad~~v~~~G----~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~ 358 (430)
T 2iyf_A 290 ---WVPQL---AILR-QADLFVTHAG----AGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLR 358 (430)
T ss_dssp ---SCCHH---HHHT-TCSEEEECCC----HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHH
T ss_pred ---cCCHH---HHhh-ccCEEEECCC----ccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHH
Confidence 44443 5677 5999998752 379999999999999997765 46667777799999887 889999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 036539 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCM 729 (749)
Q Consensus 683 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 729 (749)
++|.+++ +|++.++++++.+++.. +.++++.+++.++++++.
T Consensus 359 ~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 400 (430)
T 2iyf_A 359 ETALALV----DDPEVARRLRRIQAEMA-QEGGTRRAADLIEAELPA 400 (430)
T ss_dssp HHHHHHH----HCHHHHHHHHHHHHHHH-HHCHHHHHHHHHHTTSCC
T ss_pred HHHHHHH----cCHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHhhc
Confidence 9996554 79999999999988876 568999999999887653
No 32
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.77 E-value=3.5e-17 Score=179.40 Aligned_cols=254 Identities=11% Similarity=0.009 Sum_probs=166.1
Q ss_pred CceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHH
Q 036539 367 KPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEI 446 (749)
Q Consensus 367 ~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~ 446 (749)
+||+|++.....+..+.++++.+|+|++..-.+. ... ...++..+.++.|.+.....
T Consensus 92 ~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~----------~~G------------~~nr~l~~~a~~v~~~~~~~- 148 (365)
T 3s2u_A 92 RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNA----------VAG------------TANRSLAPIARRVCEAFPDT- 148 (365)
T ss_dssp CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSS----------SCC------------HHHHHHGGGCSEEEESSTTS-
T ss_pred CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecch----------hhh------------hHHHhhccccceeeeccccc-
Confidence 8999999988877888888999999987432211 000 12234556788886654211
Q ss_pred hhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcCc
Q 036539 447 AGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIGY 526 (749)
Q Consensus 447 ~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g~ 526 (749)
+ ....++.++.|.+..+.+.+.. ...++
T Consensus 149 ---------~-------------------~~~~k~~~~g~pvr~~~~~~~~------------------------~~~~~ 176 (365)
T 3s2u_A 149 ---------F-------------------PASDKRLTTGNPVRGELFLDAH------------------------ARAPL 176 (365)
T ss_dssp ---------S-------------------CC---CEECCCCCCGGGCCCTT------------------------SSCCC
T ss_pred ---------c-------------------cCcCcEEEECCCCchhhccchh------------------------hhccc
Confidence 0 0134666777877665543221 11233
Q ss_pred cCCCCCcEE-EEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEE
Q 036539 527 LADRKKPII-FSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRW 605 (749)
Q Consensus 527 l~~~~k~vI-l~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~f 605 (749)
+++++.+ ++.|++...+..+.+.+++..+... .++.++++++... .+.+.+...+.+ .++++
T Consensus 177 --~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~-~~~~vi~~~G~~~------------~~~~~~~~~~~~--~~~~v 239 (365)
T 3s2u_A 177 --TGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLE-IRPAIRHQAGRQH------------AEITAERYRTVA--VEADV 239 (365)
T ss_dssp --TTSCCEEEECCTTTTCSHHHHHHHHHHHTSCTT-TCCEEEEECCTTT------------HHHHHHHHHHTT--CCCEE
T ss_pred --CCCCcEEEEECCcCCccccchhhHHHHHhcccc-cceEEEEecCccc------------cccccceecccc--ccccc
Confidence 4455554 4456888877778888998887643 2455555544333 344555555554 46778
Q ss_pred ecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc--------ccccccCceEEEECCC-
Q 036539 606 IAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP--------AEIIVDGVSGFHIDPY- 676 (749)
Q Consensus 606 lG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~--------~EiI~dg~~G~lv~p~- 676 (749)
.|+.+ ++..+|+ +||++|.-+ -++|+.|+|++|+|+|....++. ++.+.+...|++++..
T Consensus 240 ~~f~~------dm~~~l~-~aDlvI~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~ 308 (365)
T 3s2u_A 240 APFIS------DMAAAYA-WADLVICRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKS 308 (365)
T ss_dssp ESCCS------CHHHHHH-HCSEEEECC----CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTT
T ss_pred ccchh------hhhhhhc-cceEEEecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCC
Confidence 88544 5788888 599999764 37899999999999998765543 2345566689988765
Q ss_pred -CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 677 -NGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 677 -d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+++.++++|.++ ++||+.+++|++++++.. .....+.+++.++++.+
T Consensus 309 ~~~~~L~~~i~~l----l~d~~~~~~m~~~a~~~~-~~~aa~~ia~~i~~lar 356 (365)
T 3s2u_A 309 TGAAELAAQLSEV----LMHPETLRSMADQARSLA-KPEATRTVVDACLEVAR 356 (365)
T ss_dssp CCHHHHHHHHHHH----HHCTHHHHHHHHHHHHTC-CTTHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHH----HCCHHHHHHHHHHHHhcC-CccHHHHHHHHHHHHHc
Confidence 478899999654 479999999999998765 45567777777777654
No 33
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.75 E-value=4.6e-18 Score=186.48 Aligned_cols=162 Identities=13% Similarity=0.018 Sum_probs=123.7
Q ss_pred CCcEEEEEecccCCCCH-HHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCc
Q 036539 531 KKPIIFSMARLDVVKNL-TGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQ 609 (749)
Q Consensus 531 ~k~vIl~vGRL~~~Kgl-~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~ 609 (749)
.+.+++++|++...|+. ..+++++.+. ...|+++++++|++.. .+.+. ++.++|++.|
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~------------~~~l~------~~~~~v~~~~-- 276 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEH------------RALLT------DLPDNARIAE-- 276 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGG------------GGGCT------TCCTTEEECC--
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcc------------hhhcc------cCCCCEEEec--
Confidence 34567777998775544 7777777776 6667899999998754 11121 3568899999
Q ss_pred cCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEE----cCccccccccccCceEEEECC----CCHHHH
Q 036539 610 SDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFA----TNQGGPAEIIVDGVSGFHIDP----YNGDES 681 (749)
Q Consensus 610 ~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVa----t~~GG~~EiI~dg~~G~lv~p----~d~e~l 681 (749)
+++..++. + ++|++|.. +.+.+++|||++|+|+|+ ++..+..+.+.+...|.++++ .|++++
T Consensus 277 --~~~~~~ll---~-~ad~~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l 346 (391)
T 3tsa_A 277 --SVPLNLFL---R-TCELVICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQF 346 (391)
T ss_dssp --SCCGGGTG---G-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHH
T ss_pred --cCCHHHHH---h-hCCEEEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHH
Confidence 45555544 5 69999975 345799999999999999 455667788888889999998 789999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 682 SDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 682 A~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+++|.+ +++||+.++++++.+++.. +..+|+.+++.++++..
T Consensus 347 ~~ai~~----ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 347 TDSIAT----VLGDTGFAAAAIKLSDEIT-AMPHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHHH----HHTCTHHHHHHHHHHHHHH-TSCCHHHHHHHHHHC--
T ss_pred HHHHHH----HHcCHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHh
Confidence 999955 5589999999998888775 78999999998887643
No 34
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.75 E-value=9.6e-18 Score=185.92 Aligned_cols=287 Identities=11% Similarity=0.090 Sum_probs=182.3
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
.+.+.+.+. +||+||++.... .+.+.+++++.|+|++...+++.. + +.+ ..+. ........-+
T Consensus 102 ~l~~~l~~~---kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~rs--~---~~~-~~~~-------~~~~r~~~~~ 165 (396)
T 3dzc_A 102 GMQQVLSSE---QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLRT--G---NIY-SPWP-------EEGNRKLTAA 165 (396)
T ss_dssp HHHHHHHHH---CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCCCC--S---CTT-SSTT-------HHHHHHHHHH
T ss_pred HHHHHHHhc---CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCccc--c---ccc-cCCc-------HHHHHHHHHH
Confidence 344444443 899999987665 466678889999998754443311 1 000 0000 0011122346
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCC-CCCCCCCCCchHHhhhhccchhhHH
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPG-ADQSVYFPYTEKQRRLTKFHPEIEE 512 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnG-vD~~~f~p~~~~~~rl~~~~~~~~~ 512 (749)
.+|.+++.|....+ +....|++ ..++.++.|. +|...+.+....... ..
T Consensus 166 ~a~~~~~~se~~~~--------------------~l~~~G~~--~~ki~vvGn~~~d~~~~~~~~~~~~~------~~-- 215 (396)
T 3dzc_A 166 LTQYHFAPTDTSRA--------------------NLLQENYN--AENIFVTGNTVIDALLAVREKIHTDM------DL-- 215 (396)
T ss_dssp TCSEEEESSHHHHH--------------------HHHHTTCC--GGGEEECCCHHHHHHHHHHHHHHHCH------HH--
T ss_pred hcCEEECCCHHHHH--------------------HHHHcCCC--cCcEEEECCcHHHHHHHhhhhcccch------hh--
Confidence 78999999987655 11234665 6789999884 443211110000000 00
Q ss_pred hhccccchhhhcCccCCCCCcEE-EEEecccC-CCCHHHHHHHHHHhHccCCCeEEEEEec-cCCCCCCcchhHHHHHHH
Q 036539 513 LLYNKEDNNEHIGYLADRKKPII-FSMARLDV-VKNLTGLTEWYGKNKRLRNLVNLVIVGA-FFDPSKSKDREETAEIKK 589 (749)
Q Consensus 513 ~l~~~~~~~~~~g~l~~~~k~vI-l~vGRL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~-g~~~~~~~d~ee~~~~~~ 589 (749)
....++.+|++ +++++++ ++.+|... .|+++.+++|+.++.+.+|++++++.++ ++. ..+.
T Consensus 216 ----~~~~r~~lg~l-~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~-----------~~~~ 279 (396)
T 3dzc_A 216 ----QATLESQFPML-DASKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLNPN-----------VREP 279 (396)
T ss_dssp ----HHHHHHTCTTC-CTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBCHH-----------HHHH
T ss_pred ----HHHHHHHhCcc-CCCCCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCChH-----------HHHH
Confidence 01223456632 3444554 45556543 5889999999999988778899988643 321 1222
Q ss_pred HHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCc
Q 036539 590 MHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT-NQGGPAEIIVDGV 668 (749)
Q Consensus 590 l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat-~~GG~~EiI~dg~ 668 (749)
+.++ .+..++|.+++ .+...++..+|+ +||++|.+| | |++ +|||++|+|||++ +.++..|.+.+|
T Consensus 280 l~~~---~~~~~~v~~~~----~lg~~~~~~l~~-~ad~vv~~S---G-g~~-~EA~a~G~PvV~~~~~~~~~e~v~~G- 345 (396)
T 3dzc_A 280 VNKL---LKGVSNIVLIE----PQQYLPFVYLMD-RAHIILTDS---G-GIQ-EEAPSLGKPVLVMRETTERPEAVAAG- 345 (396)
T ss_dssp HHHH---TTTCTTEEEEC----CCCHHHHHHHHH-HCSEEEESC---S-GGG-TTGGGGTCCEEECCSSCSCHHHHHHT-
T ss_pred HHHH---HcCCCCEEEeC----CCCHHHHHHHHH-hcCEEEECC---c-cHH-HHHHHcCCCEEEccCCCcchHHHHcC-
Confidence 3322 34457899998 666678999999 499999998 3 444 8999999999999 788888998887
Q ss_pred eEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 669 SGFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 669 ~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
+++++++ |++++++++.++ ++|++.+++|++++. .|.....++++.++.
T Consensus 346 ~~~lv~~-d~~~l~~ai~~l----l~d~~~~~~m~~~~~-----~~~~~~aa~ri~~~l 394 (396)
T 3dzc_A 346 TVKLVGT-NQQQICDALSLL----LTDPQAYQAMSQAHN-----PYGDGKACQRIADIL 394 (396)
T ss_dssp SEEECTT-CHHHHHHHHHHH----HHCHHHHHHHHTSCC-----TTCCSCHHHHHHHHH
T ss_pred ceEEcCC-CHHHHHHHHHHH----HcCHHHHHHHhhccC-----CCcCChHHHHHHHHH
Confidence 5788764 899999999654 479999999987653 465566666666543
No 35
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.74 E-value=9.2e-18 Score=184.88 Aligned_cols=156 Identities=10% Similarity=0.026 Sum_probs=105.6
Q ss_pred CCCcEEEEEecccCCC----------CHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCC
Q 036539 530 RKKPIIFSMARLDVVK----------NLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL 599 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~K----------gl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L 599 (749)
..+++++++|++...| .+..+++++.++ ++++++++++.. .+.+. .+
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~------------~~~l~------~~ 282 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL-----GFEVVVAVSDKL------------AQTLQ------PL 282 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGGG-----TCEEEECCCC--------------------------C
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC-----CCEEEEEeCCcc------------hhhhc------cC
Confidence 4456788899997555 355555555443 578999888754 22222 34
Q ss_pred CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEE----cCccccccccccCceEEEECC
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFA----TNQGGPAEIIVDGVSGFHIDP 675 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVa----t~~GG~~EiI~dg~~G~lv~p 675 (749)
.++|++.| +++ +..+++ .+|++|.. +.+.+++|||+||+|+|+ ++..+..+.+.+...|+++++
T Consensus 283 ~~~v~~~~----~~~---~~~ll~-~ad~~v~~----gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~ 350 (398)
T 4fzr_A 283 PEGVLAAG----QFP---LSAIMP-ACDVVVHH----GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPW 350 (398)
T ss_dssp CTTEEEES----CCC---HHHHGG-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC-
T ss_pred CCcEEEeC----cCC---HHHHHh-hCCEEEec----CCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCc
Confidence 68999999 554 455566 59999965 347899999999999999 555577888888899999988
Q ss_pred C--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 676 Y--NGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 676 ~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
. |+++++++|.+ +++||+.++++++.+++.. +..+|+.+++.+++
T Consensus 351 ~~~~~~~l~~ai~~----ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 351 EQAGVESVLAACAR----IRDDSSYVGNARRLAAEMA-TLPTPADIVRLIEQ 397 (398)
T ss_dssp ------CHHHHHHH----HHHCTHHHHHHHHHHHHHT-TSCCHHHHHHHHTC
T ss_pred ccCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHHH-cCCCHHHHHHHHhc
Confidence 7 77888888855 4479999999999988876 78999999887653
No 36
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.72 E-value=6.1e-17 Score=179.90 Aligned_cols=281 Identities=12% Similarity=0.095 Sum_probs=179.2
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhh
Q 036539 355 DATTMILEFLGGKPDLIIGNYSDG-NLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMN 433 (749)
Q Consensus 355 ~~~~~l~~~l~~~pDIIh~h~~~~-~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 433 (749)
.+.+.+.+. +||+||++.... .+.+.+++++.|+|++....++.. |.... .+.. .......-+
T Consensus 105 ~l~~~l~~~---kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~aglrs---------~~~~~---~~p~-~~~r~~~~~ 168 (403)
T 3ot5_A 105 GINEVIAAE---NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLRT---------WNKYS---PFPE-EMNRQLTGV 168 (403)
T ss_dssp HHHHHHHHH---CCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCC---------SCTTS---STTH-HHHHHHHHH
T ss_pred HHHHHHHHc---CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCccc---------ccccc---CCcH-HHHHHHHHH
Confidence 344444443 899999997654 565678889999997654433211 11000 0000 011122345
Q ss_pred hCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecC-CCCCCCCCCCchHHhhhhccchhhHH
Q 036539 434 ATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAP-GADQSVYFPYTEKQRRLTKFHPEIEE 512 (749)
Q Consensus 434 ~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpn-GvD~~~f~p~~~~~~rl~~~~~~~~~ 512 (749)
.+|.+++.|....+ +....|++ ..++.++.| ++|...+.+.....
T Consensus 169 ~a~~~~~~se~~~~--------------------~l~~~Gi~--~~~i~vvGn~~~D~~~~~~~~~~~------------ 214 (403)
T 3ot5_A 169 MADIHFSPTKQAKE--------------------NLLAEGKD--PATIFVTGNTAIDALKTTVQKDYH------------ 214 (403)
T ss_dssp HCSEEEESSHHHHH--------------------HHHHTTCC--GGGEEECCCHHHHHHHHHSCTTCC------------
T ss_pred hcCEEECCCHHHHH--------------------HHHHcCCC--cccEEEeCCchHHHHHhhhhhhcc------------
Confidence 58999999987655 11234665 678999987 45543222111000
Q ss_pred hhccccchhhhcCccCCCCCcEEEEEecccC-CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHH
Q 036539 513 LLYNKEDNNEHIGYLADRKKPIIFSMARLDV-VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMH 591 (749)
Q Consensus 513 ~l~~~~~~~~~~g~l~~~~k~vIl~vGRL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~ 591 (749)
...++.+ ++++.++++.||... .|++..+++|+.++.+.+|+++++++++... .++
T Consensus 215 -----~~~~~~l----~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~--------------~~~ 271 (403)
T 3ot5_A 215 -----HPILENL----GDNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNP--------------AVR 271 (403)
T ss_dssp -----CHHHHSC----TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCH--------------HHH
T ss_pred -----hHHHHhc----cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCH--------------HHH
Confidence 0001111 223345666777654 4789999999999988788999988754211 122
Q ss_pred HHHHH-cCCCCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCce
Q 036539 592 ALMEK-YQLKGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT-NQGGPAEIIVDGVS 669 (749)
Q Consensus 592 ~li~~-~~L~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat-~~GG~~EiI~dg~~ 669 (749)
+.+++ .+..++|.++| .+...++..+|+. ||++|.+| |...+|||++|+|+|++ +.|+..|.+..| +
T Consensus 272 ~~l~~~~~~~~~v~l~~----~l~~~~~~~l~~~-ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~ 340 (403)
T 3ot5_A 272 EKAMAILGGHERIHLIE----PLDAIDFHNFLRK-SYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-T 340 (403)
T ss_dssp HHHHHHHTTCTTEEEEC----CCCHHHHHHHHHH-EEEEEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-S
T ss_pred HHHHHHhCCCCCEEEeC----CCCHHHHHHHHHh-cCEEEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeCC-c
Confidence 22222 34457899999 6667799999995 99999998 44448999999999998 788888888766 8
Q ss_pred EEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 036539 670 GFHIDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLN 725 (749)
Q Consensus 670 G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 725 (749)
|+++++ |++++++++.++ ++|++.+++|++++..+. ...+++.+++.+.+
T Consensus 341 ~~lv~~-d~~~l~~ai~~l----l~~~~~~~~m~~~~~~~g-~~~aa~rI~~~l~~ 390 (403)
T 3ot5_A 341 LKLIGT-NKENLIKEALDL----LDNKESHDKMAQAANPYG-DGFAANRILAAIKS 390 (403)
T ss_dssp EEECCS-CHHHHHHHHHHH----HHCHHHHHHHHHSCCTTC-CSCHHHHHHHHHHH
T ss_pred EEEcCC-CHHHHHHHHHHH----HcCHHHHHHHHhhcCccc-CCcHHHHHHHHHHH
Confidence 999876 999999999654 479999999987654331 33444444444443
No 37
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.70 E-value=2.8e-16 Score=173.14 Aligned_cols=157 Identities=13% Similarity=0.096 Sum_probs=117.7
Q ss_pred CCCcEEEEEecccCC-CCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 530 RKKPIIFSMARLDVV-KNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
..+++++++|++... |+...+.+++..+.+. ++++++++++.. .+.+. ++.++|++.|
T Consensus 231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~--~~~~v~~~g~~~------------~~~l~------~~~~~v~~~~- 289 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGEV--DADFVLALGDLD------------ISPLG------TLPRNVRAVG- 289 (398)
T ss_dssp SSCEEEECCTTTHHHHHCGGGHHHHHHHHHTS--SSEEEEECTTSC------------CGGGC------SCCTTEEEES-
T ss_pred CCCEEEEEcCCCccccCcHHHHHHHHHHHHcC--CCEEEEEECCcC------------hhhhc------cCCCcEEEEc-
Confidence 345677888999654 4555666666666543 689999998865 11111 3568999999
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEE----cCccccc--cccccCceEEEECCC--CHHH
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFA----TNQGGPA--EIIVDGVSGFHIDPY--NGDE 680 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVa----t~~GG~~--EiI~dg~~G~lv~p~--d~e~ 680 (749)
+++. ..+++ .+|++|.. +-+.|++|||++|+|+|+ .+.++.. +.+++...|+.+++. +++.
T Consensus 290 ---~~~~---~~ll~-~ad~~v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~ 358 (398)
T 3oti_A 290 ---WTPL---HTLLR-TCTAVVHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADL 358 (398)
T ss_dssp ---SCCH---HHHHT-TCSEEEEC----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHH
T ss_pred ---cCCH---HHHHh-hCCEEEEC----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHH
Confidence 5544 44566 59999975 345799999999999999 6778888 999998999999876 4555
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 681 SSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 681 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
++ + +++||++++++++.+++.. +..+|+.+++.+++++
T Consensus 359 l~----~----ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 359 LR----R----LIGDESLRTAAREVREEMV-ALPTPAETVRRIVERI 396 (398)
T ss_dssp HH----H----HHHCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHH
T ss_pred HH----H----HHcCHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHh
Confidence 55 2 3369999999998888765 7899999999998875
No 38
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.69 E-value=1.2e-15 Score=167.26 Aligned_cols=161 Identities=12% Similarity=0.066 Sum_probs=114.4
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEE-EeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 530 RKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVI-VGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvI-VG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
..+.++++.|+....++ +.+.+++..+.+. ++++++ +|++.. .+.+. .+.++|++.|
T Consensus 230 ~~~~v~v~~G~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~g~~~~------------~~~~~------~~~~~v~~~~- 287 (402)
T 3ia7_A 230 DAPVLLVSLGNQFNEHP-EFFRACAQAFADT--PWHVVMAIGGFLD------------PAVLG------PLPPNVEAHQ- 287 (402)
T ss_dssp TCCEEEEECCSCSSCCH-HHHHHHHHHHTTS--SCEEEEECCTTSC------------GGGGC------SCCTTEEEES-
T ss_pred CCCEEEEECCCCCcchH-HHHHHHHHHHhcC--CcEEEEEeCCcCC------------hhhhC------CCCCcEEEec-
Confidence 44566788898876552 3333334334332 266665 454433 11111 2467899999
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEE-----cCccccccccccCceEEEECCC--CHHHH
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFA-----TNQGGPAEIIVDGVSGFHIDPY--NGDES 681 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVa-----t~~GG~~EiI~dg~~G~lv~p~--d~e~l 681 (749)
+++.. .+++ ++|++|..+- ..|++|||++|+|+|+ .+..+..+.+.+...|..++++ +++++
T Consensus 288 ---~~~~~---~ll~-~ad~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l 356 (402)
T 3ia7_A 288 ---WIPFH---SVLA-HARACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASI 356 (402)
T ss_dssp ---CCCHH---HHHT-TEEEEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHH
T ss_pred ---CCCHH---HHHh-hCCEEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHH
Confidence 44443 6777 5999998863 3789999999999995 4445677888888899999876 78999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 682 SDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 682 A~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+++|.+ +++|++.++++++.+.+.. +..+++.+++.++++++
T Consensus 357 ~~~~~~----ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 357 REAVER----LAADSAVRERVRRMQRDIL-SSGGPARAADEVEAYLG 398 (402)
T ss_dssp HHHHHH----HHHCHHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHH
T ss_pred HHHHHH----HHcCHHHHHHHHHHHHHHh-hCChHHHHHHHHHHHHh
Confidence 999855 4479999999988887765 77899999999988764
No 39
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.65 E-value=2e-14 Score=158.66 Aligned_cols=161 Identities=11% Similarity=0.005 Sum_probs=112.9
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEE-EeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 530 RKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVI-VGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvI-VG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
..+.++++.|+....++ +.+..++..+.+. + +++++ +|.+.. .+.+. .+.++|++.|
T Consensus 246 ~~~~v~v~~Gs~~~~~~-~~~~~~~~al~~~-~-~~~v~~~g~~~~------------~~~l~------~~~~~v~~~~- 303 (415)
T 3rsc_A 246 DLPVVLVSLGTTFNDRP-GFFRDCARAFDGQ-P-WHVVMTLGGQVD------------PAALG------DLPPNVEAHR- 303 (415)
T ss_dssp CCCEEEEECTTTSCCCH-HHHHHHHHHHTTS-S-CEEEEECTTTSC------------GGGGC------CCCTTEEEES-
T ss_pred CCCEEEEECCCCCCChH-HHHHHHHHHHhcC-C-cEEEEEeCCCCC------------hHHhc------CCCCcEEEEe-
Confidence 34556778898865432 3333333333332 3 77777 454433 11111 3567999999
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEE----cCccccccccccCceEEEECCC--CHHHHH
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFA----TNQGGPAEIIVDGVSGFHIDPY--NGDESS 682 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVa----t~~GG~~EiI~dg~~G~lv~p~--d~e~lA 682 (749)
+++.. .+++ .+|++|..+- ..|++|||++|+|+|+ .+.....+.+.+...|..+++. ++++++
T Consensus 304 ---~~~~~---~ll~-~ad~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~ 372 (415)
T 3rsc_A 304 ---WVPHV---KVLE-QATVCVTHGG----MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLL 372 (415)
T ss_dssp ---CCCHH---HHHH-HEEEEEESCC----HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHH
T ss_pred ---cCCHH---HHHh-hCCEEEECCc----HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHH
Confidence 55544 5666 5999998752 3689999999999999 4555567777887899999876 788999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 683 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
++|.+ +++|++.++++++.+.+.. +...++.+++.++++++
T Consensus 373 ~~i~~----ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 373 AAVGA----VAADPALLARVEAMRGHVR-RAGGAARAADAVEAYLA 413 (415)
T ss_dssp HHHHH----HHTCHHHHHHHHHHHHHHH-HSCHHHHHHHHHHHHHH
T ss_pred HHHHH----HHcCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhh
Confidence 99854 5589999999988877765 77999999998888764
No 40
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.62 E-value=1.1e-14 Score=159.14 Aligned_cols=157 Identities=13% Similarity=0.116 Sum_probs=114.6
Q ss_pred CCcEEEEEecccCC-------CCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcE
Q 036539 531 KKPIIFSMARLDVV-------KNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQM 603 (749)
Q Consensus 531 ~k~vIl~vGRL~~~-------Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V 603 (749)
...+++++|++... +.+..+++++.++ ++++++++++.. .+.+. . +.++|
T Consensus 210 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~------------~~~l~----~--~~~~v 266 (384)
T 2p6p_A 210 RQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVELIVAAPDTV------------AEALR----A--EVPQA 266 (384)
T ss_dssp SCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCEEEEECCHHH------------HHHHH----H--HCTTS
T ss_pred CCEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcEEEEEeCCCC------------HHhhC----C--CCCce
Confidence 34578889999875 5677777777643 578888766532 22232 1 35789
Q ss_pred EEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--C
Q 036539 604 RWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHIDPY--N 677 (749)
Q Consensus 604 ~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~p~--d 677 (749)
.+ | +++..+ +++ ++|++|..+ -+.|++|||++|+|+|+...++ ..+.+.+...|+.+++. +
T Consensus 267 ~~-~----~~~~~~---~l~-~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~ 333 (384)
T 2p6p_A 267 RV-G----WTPLDV---VAP-TCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDS 333 (384)
T ss_dssp EE-E----CCCHHH---HGG-GCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCC
T ss_pred EE-c----CCCHHH---HHh-hCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCC
Confidence 99 9 555544 456 599999974 3469999999999999987654 66777777789999875 6
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 678 GDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 678 ~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
+++++++|.+++ +|+++++++++.+.+.. ..-.-+.+++.+..+..
T Consensus 334 ~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 334 TEAIADSCQELQ----AKDTYARRAQDLSREIS-GMPLPATVVTALEQLAH 379 (384)
T ss_dssp HHHHHHHHHHHH----HCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHhh
Confidence 889999986544 79999999988887665 55577777777766543
No 41
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.50 E-value=3e-13 Score=151.26 Aligned_cols=157 Identities=10% Similarity=0.015 Sum_probs=116.0
Q ss_pred CcEEEEEecccC-----CCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEe
Q 036539 532 KPIIFSMARLDV-----VKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWI 606 (749)
Q Consensus 532 k~vIl~vGRL~~-----~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 606 (749)
..+++++|++.. .|.+..+++++..+ ++++++++++.. .+.+. ++.++|++.
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~------------~~~l~------~~~~~v~~~ 324 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAEIIATFDAQQ------------LEGVA------NIPDNVRTV 324 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SSEEEECCCTTT------------TSSCS------SCCSSEEEC
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCEEEEEECCcc------------hhhhc------cCCCCEEEe
Confidence 457788899875 48888889988654 478888777644 11111 356789999
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHHH
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHIDPY--NGDE 680 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~p~--d~e~ 680 (749)
| +++..++ ++ ++|++|.. +-+.|++|||++|+|+|+...++ ..+.+.+...|+.+++. ++++
T Consensus 325 ~----~~~~~~l---l~-~ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~ 392 (441)
T 2yjn_A 325 G----FVPMHAL---LP-TCAATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQ 392 (441)
T ss_dssp C----SCCHHHH---GG-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHH
T ss_pred c----CCCHHHH---Hh-hCCEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHH
Confidence 9 5665444 56 59999985 34579999999999999997743 56677777799999876 7889
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 681 SSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 681 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
++++|.++ ++|+++++++++.+.+.. +...++.+++.++++++
T Consensus 393 l~~~i~~l----l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 393 LRESVKRV----LDDPAHRAGAARMRDDML-AEPSPAEVVGICEELAA 435 (441)
T ss_dssp HHHHHHHH----HHCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHH----hcCHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH
Confidence 99998654 479999999988887665 68899999999888754
No 42
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=99.47 E-value=1.4e-13 Score=160.81 Aligned_cols=333 Identities=14% Similarity=0.035 Sum_probs=206.7
Q ss_pred CceEEEEcCCCchHHHH-HHHHc--------------CCCcEEEEecCCcccc---cCCCcc--------------hhhh
Q 036539 367 KPDLIIGNYSDGNLVAS-VMASK--------------LGITQATIAHALEKTK---YEDSDV--------------KWKE 414 (749)
Q Consensus 367 ~pDIIh~h~~~~~lva~-lla~~--------------~gvp~v~t~H~l~~~k---~~~s~~--------------~~~~ 414 (749)
+||+||+|.+.++++.. ++... .+.+.++|.|++...- |+...+ .+..
T Consensus 289 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~~ 368 (796)
T 2c4m_A 289 EFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRF 368 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcCHHH
Confidence 69999999999877655 44222 2456899999985432 221100 0000
Q ss_pred cC-------------c-ccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCc
Q 036539 415 LD-------------P-KYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPK 480 (749)
Q Consensus 415 ~~-------------~-~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~k 480 (749)
+. . ...+..++..-..++..|+.|-+||..-.+.++... + ++++ ...+.|
T Consensus 369 ~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~~--f--------~~~~------~~~p~k 432 (796)
T 2c4m_A 369 RLERAADGLDEETINRMAPIQHGTVHMAWIACYAAYSINGVAALHTEIIKAET--L--------ADWY------ALWPEK 432 (796)
T ss_dssp HHHHHHTTCCHHHHHHHCSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHTT--T--------HHHH------HHCGGG
T ss_pred HHHHHhcCCcHhhhhcccceeCCcccHHHHHHHhcCceeeccHHHHHHhhhhh--h--------hhHH------HcCccc
Confidence 00 0 000111344456788999999999987666443210 0 1122 123668
Q ss_pred eEEecCCCCCCCCC----CCchHH--h------------hhhccch---h------h-HHhhccccc----hhhhcCccC
Q 036539 481 FNIAAPGADQSVYF----PYTEKQ--R------------RLTKFHP---E------I-EELLYNKED----NNEHIGYLA 528 (749)
Q Consensus 481 i~VIpnGvD~~~f~----p~~~~~--~------------rl~~~~~---~------~-~~~l~~~~~----~~~~~g~l~ 528 (749)
++=|.||||...|- |....- . .+.++.+ . + +.+.-++.. .+++.|+..
T Consensus 433 f~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~v 512 (796)
T 2c4m_A 433 FNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEI 512 (796)
T ss_dssp EEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred cccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999883 321100 0 0001101 0 1 112222333 356678877
Q ss_pred CCCCcEEEEEecccCCCCHHH-HHHHHHHhHc--cC-----CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHH----H
Q 036539 529 DRKKPIIFSMARLDVVKNLTG-LTEWYGKNKR--LR-----NLVNLVIVGAFFDPSKSKDREETAEIKKMHALME----K 596 (749)
Q Consensus 529 ~~~k~vIl~vGRL~~~Kgl~~-LieA~~~l~~--~~-----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~----~ 596 (749)
+++.+.++++.|+..+|+.+. ++..+.++.+ .. .++++++.|.+.. .+......++.+..+++ .
T Consensus 513 dpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P----~y~~aK~iIk~i~~va~~in~d 588 (796)
T 2c4m_A 513 DPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAP----GYVRAKAIIKLINSIADLVNND 588 (796)
T ss_dssp CTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCT----TCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCH----hHHHHHHHHHHHHHHHHHhccc
Confidence 889999999999999999999 7888777653 22 2588988888865 23333334444555555 1
Q ss_pred cCCCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc--CceE
Q 036539 597 YQLKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD--GVSG 670 (749)
Q Consensus 597 ~~L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d--g~~G 670 (749)
-...+ +|.|+. ..+. .+.+.+-.+||++.+||+ +|++|++-+=||..|.++|+|--|...|+.++ ..||
T Consensus 589 p~~~~~lKVvFl~----nY~v-slA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~Ng 663 (796)
T 2c4m_A 589 PEVSPLLKVVFVE----NYNV-SPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENA 663 (796)
T ss_dssp TTTTTTEEEEEET----TCCH-HHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGS
T ss_pred cccCCceEEEEEC----CCCH-HHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcE
Confidence 13456 788886 4444 455555557999999999 99999999999999999999999999888755 4699
Q ss_pred EEECC--CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 671 FHIDP--YNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 671 ~lv~p--~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
|.|.. .++.++-.. .+..+....+| .|+++-+++. ...|+|..- .++..+|...
T Consensus 664 F~FG~~~~ev~~l~~~-y~a~~~y~~~~-~~~~vvd~~~---~g~fs~~~~-~~y~~Ly~~L 719 (796)
T 2c4m_A 664 YIFGARVEELPALRES-YKPYELYETVP-GLKRALDALD---NGTLNDNNS-GLFYDLKHSL 719 (796)
T ss_dssp EEESCCTTTHHHHHHT-CCHHHHHHHST-THHHHHHTTT---SSSSCCTTC-CHHHHHHHHH
T ss_pred EEecCchhhHHHHHHh-hChHHHhhcCH-HHHHHHHHHH---cCCCCCCCH-HHHHHHHHHH
Confidence 99976 566665543 33323233455 3555444443 246888665 5566666554
No 43
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.46 E-value=7.4e-13 Score=146.15 Aligned_cols=252 Identities=13% Similarity=0.067 Sum_probs=159.9
Q ss_pred CceEEEEcCCCchHHHHHHHHcCCCcEEEEecCCcccccCCCcchhhhcCcccccchhhhHHHHHhhhCCEEEeCCHHHH
Q 036539 367 KPDLIIGNYSDGNLVASVMASKLGITQATIAHALEKTKYEDSDVKWKELDPKYHFSCQFIADTIAMNATDFIIASTFQEI 446 (749)
Q Consensus 367 ~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~aD~IIt~S~~~~ 446 (749)
+||+|+++.......+++++++.|+|++....++.. .+..+ .. .......-..+|.+++.|....
T Consensus 94 kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eaglrs-----~~~~~---------pe-e~nR~~~~~~a~~~~~~te~~~ 158 (385)
T 4hwg_A 94 KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGNRC-----FDQRV---------PE-EINRKIIDHISDVNITLTEHAR 158 (385)
T ss_dssp CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCCCC-----SCTTS---------TH-HHHHHHHHHHCSEEEESSHHHH
T ss_pred CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCCcc-----ccccC---------cH-HHHHHHHHhhhceeecCCHHHH
Confidence 899999987654333377888999997655443311 00000 00 0111223456899999998765
Q ss_pred hhcCCCCCccccccccccccchhhhccCCCCCCceEEecCC-CCCCCCCCCchHHhhhhccchhhHHhhccccchhhhcC
Q 036539 447 AGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPG-ADQSVYFPYTEKQRRLTKFHPEIEELLYNKEDNNEHIG 525 (749)
Q Consensus 447 ~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnG-vD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~g 525 (749)
+ +....|++ ..++.++.|. +|...+. ... ......++.+|
T Consensus 159 ~--------------------~l~~~G~~--~~~I~vtGnp~~D~~~~~--~~~---------------~~~~~~~~~lg 199 (385)
T 4hwg_A 159 R--------------------YLIAEGLP--AELTFKSGSHMPEVLDRF--MPK---------------ILKSDILDKLS 199 (385)
T ss_dssp H--------------------HHHHTTCC--GGGEEECCCSHHHHHHHH--HHH---------------HHHCCHHHHTT
T ss_pred H--------------------HHHHcCCC--cCcEEEECCchHHHHHHh--hhh---------------cchhHHHHHcC
Confidence 5 11233665 6789888873 3421110 000 01123446677
Q ss_pred ccCCCCCcEEEEEeccc---CCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHc-C-C-
Q 036539 526 YLADRKKPIIFSMARLD---VVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKY-Q-L- 599 (749)
Q Consensus 526 ~l~~~~k~vIl~vGRL~---~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~-~-L- 599 (749)
+ ++++.++++.+|.. ..|++..+++|+.++.+.. ++.+++..+ + .+.+.++++ + +
T Consensus 200 l--~~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~-~~~vv~p~~-p---------------~~~~~l~~~~~~~~ 260 (385)
T 4hwg_A 200 L--TPKQYFLISSHREENVDVKNNLKELLNSLQMLIKEY-NFLIIFSTH-P---------------RTKKRLEDLEGFKE 260 (385)
T ss_dssp C--CTTSEEEEEECCC-----CHHHHHHHHHHHHHHHHH-CCEEEEEEC-H---------------HHHHHHHTSGGGGG
T ss_pred C--CcCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcC-CeEEEEECC-h---------------HHHHHHHHHHHHhc
Confidence 7 44444566666753 3478999999999987644 577766543 2 133444444 3 2
Q ss_pred -CCcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc-cccccccCceEEEECCCC
Q 036539 600 -KGQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG-PAEIIVDGVSGFHIDPYN 677 (749)
Q Consensus 600 -~~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG-~~EiI~dg~~G~lv~p~d 677 (749)
.++|.+++ .+...++..+++. ||+++.+| |....||+++|+|+|+..... ..|.+..| +++++.+ |
T Consensus 261 ~~~~v~l~~----~lg~~~~~~l~~~-adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv~~-d 328 (385)
T 4hwg_A 261 LGDKIRFLP----AFSFTDYVKLQMN-AFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDAG-TLIMSGF-K 328 (385)
T ss_dssp TGGGEEECC----CCCHHHHHHHHHH-CSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEECCS-S
T ss_pred CCCCEEEEc----CCCHHHHHHHHHh-CcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEcCC-C
Confidence 36899987 6667788999995 99999887 556799999999999975543 56777766 6777754 8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 036539 678 GDESSDKIADFFEACKVDPTYWNKFSTEGL 707 (749)
Q Consensus 678 ~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~ 707 (749)
++++++++.+ +++|+..+++|++++.
T Consensus 329 ~~~i~~ai~~----ll~d~~~~~~m~~~~~ 354 (385)
T 4hwg_A 329 AERVLQAVKT----ITEEHDNNKRTQGLVP 354 (385)
T ss_dssp HHHHHHHHHH----HHTTCBTTBCCSCCCH
T ss_pred HHHHHHHHHH----HHhChHHHHHhhccCC
Confidence 9999999955 4578877776665444
No 44
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=99.45 E-value=1.8e-12 Score=152.14 Aligned_cols=232 Identities=13% Similarity=0.045 Sum_probs=156.3
Q ss_pred hhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCCceEEecCCCCCCCC----CCCchH
Q 036539 424 QFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDPKFNIAAPGADQSVY----FPYTEK 499 (749)
Q Consensus 424 ~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ki~VIpnGvD~~~f----~p~~~~ 499 (749)
++..-..++..|+.|-+||..-.+.++..+ + +.++. ..+.++.-|.||||...+ .|....
T Consensus 427 ~vnMa~lai~~S~~VNgVS~lH~e~ik~~~--f--------~~~~~------~~p~k~~~iTNGI~~rrWl~~~NP~l~~ 490 (824)
T 2gj4_A 427 RINMAHLCIAGSHAVNGVARIHSEILKKTI--F--------KDFYE------LEPHKFQNKTNGITPRRWLVLCNPGLAE 490 (824)
T ss_dssp EEEHHHHHHHTCSCEEESSHHHHHHHHHTT--T--------HHHHH------HCGGGEEECCCCBCTCCCCCCTCHHHHH
T ss_pred cccHHHHHHHhcCceeeEcHHHHHHHhhHH--h--------HHHHH------cChhhcccccCCcChhhhcccCCHhHHH
Confidence 344556789999999999987666443221 0 11221 226689999999999988 332210
Q ss_pred H--hh-----------hhcc---c--hhh-----HHhhccccc----hhhhcCccCCCCCcEEEEEecccCCCCHHHH-H
Q 036539 500 Q--RR-----------LTKF---H--PEI-----EELLYNKED----NNEHIGYLADRKKPIIFSMARLDVVKNLTGL-T 551 (749)
Q Consensus 500 ~--~r-----------l~~~---~--~~~-----~~~l~~~~~----~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~L-i 551 (749)
. .. +.++ . +.+ +.+.-++.. ..++.|+..+++.+.++++.|+..+|+.+.+ +
T Consensus 491 lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l 570 (824)
T 2gj4_A 491 IIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCL 570 (824)
T ss_dssp HHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHH
T ss_pred HHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHH
Confidence 0 00 1111 0 111 112222222 4455788778899999999999999999998 7
Q ss_pred HHHHHhHc--cCC-----CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcC----CCC--cEEEecCccCcCChHHH
Q 036539 552 EWYGKNKR--LRN-----LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQ----LKG--QMRWIAAQSDRLRNGEL 618 (749)
Q Consensus 552 eA~~~l~~--~~~-----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~----L~~--~V~flG~~~~~~~~~el 618 (749)
..+.++.+ ..| ++++++.|.+.. .+......++.+..+++.++ ..+ +|.|+. ..+. .+
T Consensus 571 ~~i~~~~~i~~~~~~~~~p~q~If~GKA~P----~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~----nYdv-sl 641 (824)
T 2gj4_A 571 HVITLYNRIKKEPNKFVVPRTVMIGGKAAP----GYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLE----NYRV-SL 641 (824)
T ss_dssp HHHHHHHHHHHCTTSCCCCEEEEEECCCCT----TCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEET----TCCH-HH
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEEEeCCH----hHHHHHHHHHHHHHHHHHhccCcccCCceEEEEEC----CCCH-HH
Confidence 77766631 122 478888888865 24444445555777776653 245 788886 3444 45
Q ss_pred HHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc--cCceEEEECCCCHHHH
Q 036539 619 YRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIV--DGVSGFHIDPYNGDES 681 (749)
Q Consensus 619 ~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~--dg~~G~lv~p~d~e~l 681 (749)
.+.+-.+||++.+||+ +|++|++-+=||..|.++|+|--|...|+.+ ...|||.|... ++++
T Consensus 642 A~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~-~~ev 707 (824)
T 2gj4_A 642 AEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMR-VEDV 707 (824)
T ss_dssp HHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCC-HHHH
T ss_pred HHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeCCc-HHHH
Confidence 5555557999999999 9999999999999999999998888878764 35689999865 6665
No 45
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=99.42 E-value=2e-12 Score=151.13 Aligned_cols=333 Identities=12% Similarity=0.002 Sum_probs=208.0
Q ss_pred CceEEEEcCCCchHHHH-HHHHc--------------CCCcEEEEecCCcccc---cCCCcc-------h-------hh-
Q 036539 367 KPDLIIGNYSDGNLVAS-VMASK--------------LGITQATIAHALEKTK---YEDSDV-------K-------WK- 413 (749)
Q Consensus 367 ~pDIIh~h~~~~~lva~-lla~~--------------~gvp~v~t~H~l~~~k---~~~s~~-------~-------~~- 413 (749)
+||+||+|.+.++++.. ++... .+.+.++|.|++...- |+...+ . +.
T Consensus 299 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~f 378 (796)
T 1l5w_A 299 DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRF 378 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccCHHH
Confidence 69999999999876655 33222 3677899999985432 221100 0 00
Q ss_pred --h-----------cCc-ccccchhhhHHHHHhhhCCEEEeCCHHHHhhcCCCCCccccccccccccchhhhccCCCCCC
Q 036539 414 --E-----------LDP-KYHFSCQFIADTIAMNATDFIIASTFQEIAGSKDRPGQYESHTAFTLPGLCRVVKGIDVLDP 479 (749)
Q Consensus 414 --~-----------~~~-~y~f~~~~~~e~~a~~~aD~IIt~S~~~~~~~~~~~~qye~~~~~~~p~ly~v~~Gi~~~~~ 479 (749)
. +.. ...+..++..-..++..|+.|-+||..-.+.++... + ++++ ..++.
T Consensus 379 ~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~--f--------~~~~------~~~p~ 442 (796)
T 1l5w_A 379 KTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDL--F--------PEYH------QLWPN 442 (796)
T ss_dssp HHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTT--S--------HHHH------HHCGG
T ss_pred HHHHHHhcCCcHHHHhhhhcccCCcccHHHHHHHhcCccccccHHHHHHHHhHH--h--------hHHH------HhCcc
Confidence 0 000 000111333455688999999999987666443221 0 1112 22366
Q ss_pred ceEEecCCCCCCCCC----CCchH-------------Hhhhhccch---------hh-HHhhccccc----hhhhcCccC
Q 036539 480 KFNIAAPGADQSVYF----PYTEK-------------QRRLTKFHP---------EI-EELLYNKED----NNEHIGYLA 528 (749)
Q Consensus 480 ki~VIpnGvD~~~f~----p~~~~-------------~~rl~~~~~---------~~-~~~l~~~~~----~~~~~g~l~ 528 (749)
|++=|.||||...+- |.... ...+.++.+ .+ +.+.-++.. .+++.|+..
T Consensus 443 k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~v 522 (796)
T 1l5w_A 443 KFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEI 522 (796)
T ss_dssp GEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred ccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 899999999988773 22110 001111111 00 112222223 245678877
Q ss_pred CCCCcEEEEEecccCCCCHHH-HHHHHHHhHcc--C-----CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHH----
Q 036539 529 DRKKPIIFSMARLDVVKNLTG-LTEWYGKNKRL--R-----NLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEK---- 596 (749)
Q Consensus 529 ~~~k~vIl~vGRL~~~Kgl~~-LieA~~~l~~~--~-----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~---- 596 (749)
+++.+.++++.|+..+|+.+. ++..+.++.+. . .++++++.|.+.. .+......++.+..+++.
T Consensus 523 dpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P----~y~~aK~iIk~i~~va~~in~D 598 (796)
T 1l5w_A 523 NPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKVADVINND 598 (796)
T ss_dssp CTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCT----TCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCCh----hHHHHHHHHHHHHHHHHHhccc
Confidence 889999999999999999999 78777766431 1 2588988888865 233333344445555551
Q ss_pred cCCCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc--CceE
Q 036539 597 YQLKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVD--GVSG 670 (749)
Q Consensus 597 ~~L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~d--g~~G 670 (749)
-...+ +|.|+. ..+. .+.+.+-.+||++.+||+ +|++|++-+=||..|.++|+|--|...|+.++ ..||
T Consensus 599 p~~~~~lKVvfl~----nY~v-slA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~Ng 673 (796)
T 1l5w_A 599 PLVGDKLKVVFLP----DYCV-SAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENI 673 (796)
T ss_dssp TTTGGGEEEEECS----SCCH-HHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGS
T ss_pred cccCCceEEEEEC----CCCH-HHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhccCCCcE
Confidence 13456 788886 4444 455555557999999999 99999999999999999999999999888755 4699
Q ss_pred EEECCCCHHHHHHHH---HHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 036539 671 FHIDPYNGDESSDKI---ADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGCMY 730 (749)
Q Consensus 671 ~lv~p~d~e~lA~aI---~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 730 (749)
|.|.. +++++.+.- .+..+....+| .++++-+++.. ..|||... .++..+|...
T Consensus 674 F~FG~-~~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd~~~~---g~fs~~~~-~~y~~Ly~~L 730 (796)
T 1l5w_A 674 FIFGH-TVEQVKAILAKGYDPVKWRKKDK-VLDAVLKELES---GKYSDGDK-HAFDQMLHSI 730 (796)
T ss_dssp EECSC-CHHHHHHHHHHCCCHHHHHHHCH-HHHHHHHHHHH---TTTTTTCT-TTTHHHHHHT
T ss_pred EEecC-CHHHHHHHHHcccCHHHHhhcCH-HHHHHHHHHHc---CCCCCCcH-HHHHHHHHHH
Confidence 99986 777765322 11222233466 46665555543 57999774 6677777654
No 46
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.42 E-value=5.2e-12 Score=139.77 Aligned_cols=156 Identities=12% Similarity=0.031 Sum_probs=108.4
Q ss_pred CCCcEEEEEeccc-CCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 530 RKKPIIFSMARLD-VVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 530 ~~k~vIl~vGRL~-~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
..+++++++|++. ..+.+..+++++.++ +++++++++.... +..++.++|.+.+
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~vv~~~g~~~~-------------------~~~~~~~~v~~~~- 274 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRRVVLSSGWAGL-------------------GRIDEGDDCLVVG- 274 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCCEEEECTTTTC-------------------CCSSCCTTEEEES-
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCEEEEEeCCccc-------------------ccccCCCCEEEec-
Confidence 4466788889998 667777788888765 4677777665431 0123468899998
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHHHHH
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHIDPY--NGDESS 682 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~p~--d~e~lA 682 (749)
+++..++. . .+|++|..+- ..|+.||+++|+|+|+...++ ..+.+++...|..+++. ++++++
T Consensus 275 ---~~~~~~ll---~-~~d~~v~~gG----~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~ 343 (404)
T 3h4t_A 275 ---EVNHQVLF---G-RVAAVVHHGG----AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLS 343 (404)
T ss_dssp ---SCCHHHHG---G-GSSEEEECCC----HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHH
T ss_pred ---CCCHHHHH---h-hCcEEEECCc----HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHH
Confidence 56655544 4 5999998752 269999999999999976554 23445666688888754 678888
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 683 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
++|.+ +++ |++++++++.+.... + -.++.+++.++.+++
T Consensus 344 ~ai~~----ll~-~~~~~~~~~~~~~~~-~-~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 344 AALAT----ALT-PGIRARAAAVAGTIR-T-DGTTVAAKLLLEAIS 382 (404)
T ss_dssp HHHHH----HTS-HHHHHHHHHHHTTCC-C-CHHHHHHHHHHHHHH
T ss_pred HHHHH----HhC-HHHHHHHHHHHHHHh-h-hHHHHHHHHHHHHHh
Confidence 88854 557 888887776665443 3 566777777766543
No 47
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.42 E-value=2e-11 Score=135.39 Aligned_cols=161 Identities=16% Similarity=0.115 Sum_probs=109.9
Q ss_pred CCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEE-EEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 530 RKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLV-IVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
+.+.++++.|+.. .+..+.+.+++..+.+ .+++++ ++|.+.. .+.+. .++++|++.+
T Consensus 254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~--~~~~~~~~~g~~~~------------~~~~~------~~~~~v~~~~- 311 (424)
T 2iya_A 254 GRPVLLIALGSAF-TDHLDFYRTCLSAVDG--LDWHVVLSVGRFVD------------PADLG------EVPPNVEVHQ- 311 (424)
T ss_dssp SCCEEEEECCSSS-CCCHHHHHHHHHHHTT--CSSEEEEECCTTSC------------GGGGC------SCCTTEEEES-
T ss_pred CCCEEEEEcCCCC-cchHHHHHHHHHHHhc--CCcEEEEEECCcCC------------hHHhc------cCCCCeEEec-
Confidence 3456778889887 3444444445544543 357774 4566543 11111 2467899999
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHHHHH
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHIDPY--NGDESS 682 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~p~--d~e~lA 682 (749)
+++.. .+|+ .+|++|..+ -..+++|||++|+|+|+....+ ..+.+.+...|+.+++. ++++++
T Consensus 312 ---~~~~~---~~l~-~~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~ 380 (424)
T 2iya_A 312 ---WVPQL---DILT-KASAFITHA----GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLR 380 (424)
T ss_dssp ---SCCHH---HHHT-TCSEEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHH
T ss_pred ---CCCHH---HHHh-hCCEEEECC----chhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHH
Confidence 55544 5677 599999863 2479999999999999986643 45556667789988765 788899
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 036539 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMGC 728 (749)
Q Consensus 683 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 728 (749)
++|.++ ++|++.++++++.+.+.. +....+.+++.++++.+
T Consensus 381 ~~i~~l----l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 381 EAVLAV----ASDPGVAERLAAVRQEIR-EAGGARAAADILEGILA 421 (424)
T ss_dssp HHHHHH----HHCHHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHH
T ss_pred HHHHHH----HcCHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHh
Confidence 888654 479998888887776543 55677777777777654
No 48
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.30 E-value=3.3e-11 Score=133.52 Aligned_cols=154 Identities=11% Similarity=-0.019 Sum_probs=104.8
Q ss_pred CCcEEEEEecc-cCCCCHHHHHHHHHHhHccCCCeEEEEE-eccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 531 KKPIIFSMARL-DVVKNLTGLTEWYGKNKRLRNLVNLVIV-GAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 531 ~k~vIl~vGRL-~~~Kgl~~LieA~~~l~~~~~~v~LvIV-G~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
...++++.|++ ...|.++.+++++.++. .+++++ |.+.. + . ..+.++|.+.|
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~~-----~~~v~~~g~~~~-------------~-~------~~~~~~v~~~~- 291 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAHG-----RRVILSRGWADL-------------V-L------PDDGADCFAIG- 291 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHTT-----CCEEECTTCTTC-------------C-C------SSCGGGEEECS-
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHCC-----CeEEEEeCCCcc-------------c-c------cCCCCCEEEeC-
Confidence 35678888999 57888888888887752 456555 55432 0 0 13456899998
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHHHHH
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHIDPY--NGDESS 682 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~p~--d~e~lA 682 (749)
+++..++ ++ ++|++|..+ -..|++|||++|+|+|+....+ ..+.+++...|+.+++. +.++++
T Consensus 292 ---~~~~~~~---l~-~~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~ 360 (415)
T 1iir_A 292 ---EVNHQVL---FG-RVAAVIHHG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLS 360 (415)
T ss_dssp ---SCCHHHH---GG-GSSEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHH
T ss_pred ---cCChHHH---Hh-hCCEEEeCC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHH
Confidence 6666555 45 699999864 2369999999999999986554 55667777789998764 678888
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 683 DKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 683 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
++| .++ .|++.++++++.+.+.. ..-..+.+++.++++.
T Consensus 361 ~~i----~~l-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~ 399 (415)
T 1iir_A 361 AAL----ATA-LTPETHARATAVAGTIR-TDGAAVAARLLLDAVS 399 (415)
T ss_dssp HHH----HHH-TSHHHHHHHHHHHHHSC-SCHHHHHHHHHHHHHH
T ss_pred HHH----HHH-cCHHHHHHHHHHHHHHh-hcChHHHHHHHHHHHH
Confidence 888 567 78888887766655432 2334455555555543
No 49
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=99.25 E-value=6.3e-11 Score=136.11 Aligned_cols=180 Identities=11% Similarity=-0.043 Sum_probs=124.7
Q ss_pred cCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEE--EEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCC
Q 036539 524 IGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLV--IVGAFFDPSKSKDREETAEIKKMHALMEKYQLKG 601 (749)
Q Consensus 524 ~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~Lv--IVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~ 601 (749)
+|+..+++.+++++.+++ .|..+.+++++.++.+..|+..++ ++|.+..+ .+.+.+.+.+.|+.+
T Consensus 433 ~~lp~~~G~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~-----------~~~~~~~~~~~GI~~ 499 (631)
T 3q3e_A 433 YLLRENPEVVNIGIASTT--MKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGI-----------THPYVERFIKSYLGD 499 (631)
T ss_dssp CCCCSCCSEEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGG-----------GHHHHHHHHHHHHGG
T ss_pred ccCCcCCCeEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchh-----------hHHHHHHHHHcCCCc
Confidence 565322346678888875 688999999999998888887764 35643220 122223345667878
Q ss_pred cEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccc------cCceEEEECC
Q 036539 602 QMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIV------DGVSGFHIDP 675 (749)
Q Consensus 602 ~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~------dg~~G~lv~p 675 (749)
++.|+| .++..+....++. +|+++-|+.+.+ |+|.+|||+||+|||+..-+++..-+. -|-.++++.
T Consensus 500 Rv~F~g----~~p~~e~la~y~~-aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA- 572 (631)
T 3q3e_A 500 SATAHP----HSPYHQYLRILHN-CDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA- 572 (631)
T ss_dssp GEEEEC----CCCHHHHHHHHHT-CSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE-
T ss_pred cEEEcC----CCCHHHHHHHHhc-CcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec-
Confidence 999999 7778898999995 999999998755 999999999999999965554444332 233343232
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 676 YNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 676 ~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
.|.++++++.. +|.+|++.+++++++.+++.....-|+..++++.++|
T Consensus 573 ~d~eeYv~~Av----~La~D~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~y 620 (631)
T 3q3e_A 573 NTVDEYVERAV----RLAENHQERLELRRYIIENNGLNTLFTGDPRPMGQVF 620 (631)
T ss_dssp SSHHHHHHHHH----HHHHCHHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHH
T ss_pred CCHHHHHHHHH----HHhCCHHHHHHHHHHHHHHhhhCCCcchhHHHHHHHH
Confidence 27888887774 4558999999999999988644322223444444443
No 50
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.24 E-value=9.1e-11 Score=129.91 Aligned_cols=152 Identities=11% Similarity=-0.006 Sum_probs=102.0
Q ss_pred CCcEEEEEeccc---CCCCHHHHHHHHHHhHccCCCeEEEEE-eccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEe
Q 036539 531 KKPIIFSMARLD---VVKNLTGLTEWYGKNKRLRNLVNLVIV-GAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWI 606 (749)
Q Consensus 531 ~k~vIl~vGRL~---~~Kgl~~LieA~~~l~~~~~~v~LvIV-G~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 606 (749)
.+.++++.|++. ..|.+..+++++..+ +++++++ |.+.. + . ..+++++.+.
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~-------------~-~------~~~~~~v~~~ 291 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRRVILSRGWTEL-------------V-L------PDDRDDCFAI 291 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCCEEEECTTTTC-------------C-C------SCCCTTEEEE
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC-----CCeEEEEeCCccc-------------c-c------cCCCCCEEEe
Confidence 356778889984 466677778887765 3566665 54432 0 0 1346789999
Q ss_pred cCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECC--CCHHH
Q 036539 607 AAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDGVSGFHIDP--YNGDE 680 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg~~G~lv~p--~d~e~ 680 (749)
+ +++..++ +. ++|++|.-+ -..|+.|||++|+|+|+....+ ..+.+++...|..++. .+.++
T Consensus 292 ~----~~~~~~l---l~-~~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~ 359 (416)
T 1rrv_A 292 D----EVNFQAL---FR-RVAAVIHHG----SAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFES 359 (416)
T ss_dssp S----SCCHHHH---GG-GSSEEEECC----CHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHH
T ss_pred c----cCChHHH---hc-cCCEEEecC----ChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHH
Confidence 8 6666554 45 699999853 2469999999999999975533 5556667778998875 36788
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH-HHH
Q 036539 681 SSDKIADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKM-LNM 726 (749)
Q Consensus 681 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~l-l~l 726 (749)
++++| .++ .|+++++++++.+.+.. ..-.. .+++.+ +.+
T Consensus 360 l~~~i----~~l-~~~~~~~~~~~~~~~~~-~~~~~-~~~~~i~e~~ 399 (416)
T 1rrv_A 360 LSAAL----TTV-LAPETRARAEAVAGMVL-TDGAA-AAADLVLAAV 399 (416)
T ss_dssp HHHHH----HHH-TSHHHHHHHHHHTTTCC-CCHHH-HHHHHHHHHH
T ss_pred HHHHH----HHh-hCHHHHHHHHHHHHHHh-hcCcH-HHHHHHHHHH
Confidence 88888 567 89988888776654432 22233 444444 443
No 51
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.22 E-value=4.2e-11 Score=131.03 Aligned_cols=159 Identities=13% Similarity=0.158 Sum_probs=103.6
Q ss_pred CCCcEEEEEecccCCC-CHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecC
Q 036539 530 RKKPIIFSMARLDVVK-NLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAA 608 (749)
Q Consensus 530 ~~k~vIl~vGRL~~~K-gl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~ 608 (749)
..+.++++.|++...+ +...+.+++..+.+. +..+++.+++.... ....+++++.+.+
T Consensus 236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~--~~~~v~~~~~~~~~------------------~~~~~~~~v~~~~- 294 (400)
T 4amg_A 236 GRRRIAVTLGSIDALSGGIAKLAPLFSEVADV--DAEFVLTLGGGDLA------------------LLGELPANVRVVE- 294 (400)
T ss_dssp TCCEEEECCCSCC--CCSSSTTHHHHHHGGGS--SSEEEEECCTTCCC------------------CCCCCCTTEEEEC-
T ss_pred CCcEEEEeCCcccccCccHHHHHHHHHHhhcc--CceEEEEecCcccc------------------ccccCCCCEEEEe-
Confidence 3445677788876644 445555566555543 46777766654411 1124568899998
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEEEECCCCHHHHHHH
Q 036539 609 QSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEIIVDGVSGFHIDPYNGDESSDK 684 (749)
Q Consensus 609 ~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G----G~~EiI~dg~~G~lv~p~d~e~lA~a 684 (749)
+++..++ ++ .+|+||.- +-..++.|||++|+|+|+.... ...+.+++...|..++.. +..+++
T Consensus 295 ---~~p~~~l---L~-~~~~~v~h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~--~~~~~a 361 (400)
T 4amg_A 295 ---WIPLGAL---LE-TCDAIIHH----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAG--SLGAEQ 361 (400)
T ss_dssp ---CCCHHHH---HT-TCSEEEEC----CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTT--TCSHHH
T ss_pred ---ecCHHHH---hh-hhhheecc----CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCC--CchHHH
Confidence 6766555 45 59999865 3456999999999999996444 355666666688888754 446777
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 036539 685 IADFFEACKVDPTYWNKFSTEGLKRINECYTWKIYANKMLNMG 727 (749)
Q Consensus 685 I~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 727 (749)
|.+ +++||+++++..+-+.+ +...-+....++.++++.
T Consensus 362 l~~----lL~d~~~r~~a~~l~~~-~~~~~~~~~~a~~le~lA 399 (400)
T 4amg_A 362 CRR----LLDDAGLREAALRVRQE-MSEMPPPAETAAXLVALA 399 (400)
T ss_dssp HHH----HHHCHHHHHHHHHHHHH-HHTSCCHHHHHHHHHHHC
T ss_pred HHH----HHcCHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHhh
Confidence 755 44799988876655544 345568888888877753
No 52
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=98.97 E-value=1.3e-09 Score=105.43 Aligned_cols=132 Identities=12% Similarity=0.127 Sum_probs=97.9
Q ss_pred CCcEEEEEeccc---CCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEec
Q 036539 531 KKPIIFSMARLD---VVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIA 607 (749)
Q Consensus 531 ~k~vIl~vGRL~---~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG 607 (749)
.+.+++++|++. +.|++..+++++.++ +.++++++++..+ + .+.++|++.|
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~~------------~---------~~~~~v~~~~ 74 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI-----PQKVLWRFDGNKP------------D---------TLGLNTRLYK 74 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS-----SSEEEEECCSSCC------------T---------TCCTTEEEES
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC-----CCeEEEEECCcCc------------c---------cCCCcEEEec
Confidence 456788899985 567777777777543 3688888876541 0 2457899999
Q ss_pred CccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEEEECCC--CHHHH
Q 036539 608 AQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQG----GPAEIIVDGVSGFHIDPY--NGDES 681 (749)
Q Consensus 608 ~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~G----G~~EiI~dg~~G~lv~p~--d~e~l 681 (749)
+++..++..+ + ++|++|..+ -+.|++|||++|+|+|+.... +..+.+.+...|+.+++. +++++
T Consensus 75 ----~~~~~~~l~~-~-~ad~~I~~~----G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l 144 (170)
T 2o6l_A 75 ----WIPQNDLLGH-P-KTRAFITHG----GANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDL 144 (170)
T ss_dssp ----SCCHHHHHTS-T-TEEEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHH
T ss_pred ----CCCHHHHhcC-C-CcCEEEEcC----CccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHH
Confidence 6666565543 5 599999863 468999999999999999764 356677778899999877 78899
Q ss_pred HHHHHHHHHHhcCCHHHHHHH
Q 036539 682 SDKIADFFEACKVDPTYWNKF 702 (749)
Q Consensus 682 A~aI~~~l~~l~~dp~~~~~m 702 (749)
+++|.+++ .|++.++++
T Consensus 145 ~~~i~~ll----~~~~~~~~a 161 (170)
T 2o6l_A 145 LNALKRVI----NDPSYKENV 161 (170)
T ss_dssp HHHHHHHH----HCHHHHHHH
T ss_pred HHHHHHHH----cCHHHHHHH
Confidence 99996554 687755444
No 53
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.05 E-value=0.00012 Score=86.97 Aligned_cols=187 Identities=13% Similarity=0.082 Sum_probs=135.1
Q ss_pred hhhhcCccCCCCCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCC
Q 036539 520 NNEHIGYLADRKKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQL 599 (749)
Q Consensus 520 ~~~~~g~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L 599 (749)
.+..+|+ +.+.+++++..++. |=-...++++.++.+.-|+.+|++...... ..+.+.+.+++.|+
T Consensus 513 ~R~~~gL--p~~~v~f~~fN~~~--Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~-----------~~~~l~~~~~~~gi 577 (723)
T 4gyw_A 513 TRSQYGL--PEDAIVYCNFNQLY--KIDPSTLQMWANILKRVPNSVLWLLRFPAV-----------GEPNIQQYAQNMGL 577 (723)
T ss_dssp EGGGGTC--CTTSEEEECCSCGG--GCCHHHHHHHHHHHHHCSSEEEEEEETTGG-----------GHHHHHHHHHHTTC
T ss_pred chhhcCC--CCCCEEEEeCCccc--cCCHHHHHHHHHHHHhCCCCeEEEEeCcHH-----------HHHHHHHHHHhcCC
Confidence 4566788 67777777777665 445677888888888889999999876543 13567888888888
Q ss_pred C-CcEEEecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccc-----cccc-CceEEE
Q 036539 600 K-GQMRWIAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAE-----IIVD-GVSGFH 672 (749)
Q Consensus 600 ~-~~V~flG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~E-----iI~d-g~~G~l 672 (749)
. ++|.|.+ ..+..+....+.. +||++=|-.| +-|.|.+||+.+|+|||+-.-..+.. ++.. |-.-+
T Consensus 578 ~~~r~~f~~----~~~~~~~l~~~~~-~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~- 650 (723)
T 4gyw_A 578 PQNRIIFSP----VAPKEEHVRRGQL-ADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLEL- 650 (723)
T ss_dssp CGGGEEEEE----CCCHHHHHHHGGG-CSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGG-
T ss_pred CcCeEEECC----CCCHHHHHHHhCC-CeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCccc-
Confidence 5 6899999 7778888888885 9999988666 44899999999999999853221111 1110 11112
Q ss_pred ECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHhHhHHh
Q 036539 673 IDPYNGDESSDKIADFFEACKVDPTYWNKFSTEGLKRINE--CYTWKIYANKMLNMGCMYSFWKQ 735 (749)
Q Consensus 673 v~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~--~ysw~~~a~~ll~ly~~~~~~~~ 735 (749)
| ..|.++..+.-. +|.+|++.+.++.++-+++... -|+-+..++.+++.|+. .|+.
T Consensus 651 i-a~~~~~Y~~~a~----~la~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~--~w~r 708 (723)
T 4gyw_A 651 I-AKNRQEYEDIAV----KLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQ--MWEH 708 (723)
T ss_dssp B-CSSHHHHHHHHH----HHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHH--HHHH
T ss_pred c-cCCHHHHHHHHH----HHhcCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHH--HHHH
Confidence 2 236777766664 3558999999999888887755 38999999999999876 4543
No 54
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=97.87 E-value=0.012 Score=66.10 Aligned_cols=70 Identities=13% Similarity=0.133 Sum_probs=46.1
Q ss_pred cCChHHHHHHHHccCc--EEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----ccccc-ccCceEEEECCC-----CHH
Q 036539 612 RLRNGELYRCIADTKG--AFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEII-VDGVSGFHIDPY-----NGD 679 (749)
Q Consensus 612 ~~~~~el~~~la~aad--vfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI-~dg~~G~lv~p~-----d~e 679 (749)
+++.. .+++ .++ +||.-. =-.+++||+++|+|+|+-...+ .+..+ +.-+.|..++.. +.+
T Consensus 346 w~Pq~---~vL~-h~~v~~fvtHg----G~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~ 417 (480)
T 2vch_A 346 WAPQA---QVLA-HPSTGGFLTHC----GWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRRE 417 (480)
T ss_dssp CCCHH---HHHH-STTEEEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHH
T ss_pred ccCHH---HHhC-CCCcCeEEecc----cchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHH
Confidence 55554 4454 466 555541 2358999999999999965433 34443 466688877643 678
Q ss_pred HHHHHHHHHH
Q 036539 680 ESSDKIADFF 689 (749)
Q Consensus 680 ~lA~aI~~~l 689 (749)
+++++|.+++
T Consensus 418 ~l~~av~~vl 427 (480)
T 2vch_A 418 EVARVVKGLM 427 (480)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888886554
No 55
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=97.83 E-value=0.0048 Score=69.47 Aligned_cols=151 Identities=10% Similarity=0.031 Sum_probs=83.8
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC
Q 036539 532 KPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD 611 (749)
Q Consensus 532 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 611 (749)
..++++.|.+.. .....+.+++..+.+. +.+++++-+....... + +.. -+.+ .++. .+++...+
T Consensus 296 ~vv~vs~GS~~~-~~~~~~~~~~~~l~~~--~~~~l~~~~~~~~~~~-~-~~l--~~~~---~~~~--~~~~~v~~---- 359 (482)
T 2pq6_A 296 SVVYVNFGSTTV-MTPEQLLEFAWGLANC--KKSFLWIIRPDLVIGG-S-VIF--SSEF---TNEI--ADRGLIAS---- 359 (482)
T ss_dssp CEEEEECCSSSC-CCHHHHHHHHHHHHHT--TCEEEEECCGGGSTTT-G-GGS--CHHH---HHHH--TTTEEEES----
T ss_pred ceEEEecCCccc-CCHHHHHHHHHHHHhc--CCcEEEEEcCCccccc-c-ccC--cHhH---HHhc--CCCEEEEe----
Confidence 445666777653 2344455555444432 4666665433210000 0 000 0111 1122 46788888
Q ss_pred cCChHHHHHHHHc-cCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccc-cCceEEEECC-CCHHHHHHH
Q 036539 612 RLRNGELYRCIAD-TKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIV-DGVSGFHIDP-YNGDESSDK 684 (749)
Q Consensus 612 ~~~~~el~~~la~-aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~-dg~~G~lv~p-~d~e~lA~a 684 (749)
+++..+ +++. ++++||.-. =..+++||+++|+|+|+-...+ .+..+. +-+.|..++. -+.++++++
T Consensus 360 ~~pq~~---~L~h~~~~~~vth~----G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~ 432 (482)
T 2pq6_A 360 WCPQDK---VLNHPSIGGFLTHC----GWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKL 432 (482)
T ss_dssp CCCHHH---HHTSTTEEEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHHH
T ss_pred ecCHHH---HhcCCCCCEEEecC----CcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCCHHHHHHH
Confidence 666654 5542 234476642 2468999999999999975443 344343 4567888762 267888888
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHH
Q 036539 685 IADFFEACKVDPTYWNKFSTEGLKRI 710 (749)
Q Consensus 685 I~~~l~~l~~dp~~~~~ms~~a~~~v 710 (749)
|.+ +..|++ .++|.+++++..
T Consensus 433 i~~----ll~~~~-~~~~r~~a~~l~ 453 (482)
T 2pq6_A 433 INE----VIAGDK-GKKMKQKAMELK 453 (482)
T ss_dssp HHH----HHTSHH-HHHHHHHHHHHH
T ss_pred HHH----HHcCCc-HHHHHHHHHHHH
Confidence 855 447886 356666665543
No 56
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=97.71 E-value=0.0019 Score=72.39 Aligned_cols=94 Identities=15% Similarity=0.116 Sum_probs=62.6
Q ss_pred CCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccC-ceEEEE
Q 036539 600 KGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDG-VSGFHI 673 (749)
Q Consensus 600 ~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg-~~G~lv 673 (749)
.+++...+ +++.. .+++. ++|+||.=. =..+++||+++|+|+|+-...+ .+..+.+. +.|..+
T Consensus 324 ~~~~~v~~----w~pq~---~vL~h~~~~~fvth~----G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l 392 (456)
T 2c1x_A 324 RGYGMVVP----WAPQA---EVLAHEAVGAFVTHC----GWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI 392 (456)
T ss_dssp TTTEEEES----CCCHH---HHHTSTTEEEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred CCceEEec----CCCHH---HHhcCCcCCEEEecC----CcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEe
Confidence 36788887 66654 34552 367887652 2469999999999999974432 34555565 688888
Q ss_pred CCC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 036539 674 DPY--NGDESSDKIADFFEACKVDPTYWNKFSTEGLKR 709 (749)
Q Consensus 674 ~p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~ 709 (749)
+.. +.++++++|.+++ .|++ .++|.+++++.
T Consensus 393 ~~~~~~~~~l~~~i~~ll----~~~~-~~~~r~~a~~l 425 (456)
T 2c1x_A 393 EGGVFTKSGLMSCFDQIL----SQEK-GKKLRENLRAL 425 (456)
T ss_dssp GGGSCCHHHHHHHHHHHH----HSHH-HHHHHHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHH----CCCc-HHHHHHHHHHH
Confidence 643 5788888886544 6775 45566665554
No 57
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=97.67 E-value=0.0092 Score=66.86 Aligned_cols=134 Identities=16% Similarity=0.106 Sum_probs=75.4
Q ss_pred CCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCcc
Q 036539 531 KKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQS 610 (749)
Q Consensus 531 ~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 610 (749)
...++++.|.+...-+.+.+.+++..+.+. +++++++-+... ..-++ .+.+.... .+++...+
T Consensus 276 ~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~--~~~~l~~~~~~~---~~l~~------~~~~~~~~---~~~~~v~~--- 338 (463)
T 2acv_A 276 KSVVFLCFGSMGVSFGPSQIREIALGLKHS--GVRFLWSNSAEK---KVFPE------GFLEWMEL---EGKGMICG--- 338 (463)
T ss_dssp TCEEEEECCSSCCCCCHHHHHHHHHHHHHH--TCEEEEECCCCG---GGSCT------THHHHHHH---HCSEEEES---
T ss_pred CceEEEEeccccccCCHHHHHHHHHHHHhC--CCcEEEEECCCc---ccCCh------hHHHhhcc---CCCEEEEc---
Confidence 345667778776323434444444444332 356666554320 00011 11111100 24677777
Q ss_pred CcCChHHHHHHHH-ccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccc-cccCceEEEE-C---C----C
Q 036539 611 DRLRNGELYRCIA-DTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEI-IVDGVSGFHI-D---P----Y 676 (749)
Q Consensus 611 ~~~~~~el~~~la-~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~Ei-I~dg~~G~lv-~---p----~ 676 (749)
+++..+ +++ .++|+||.-. =..+++||+++|+|+|+-...+ .+.. ++.-+.|..+ + . -
T Consensus 339 -w~pq~~---vL~h~~~~~fvth~----G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~ 410 (463)
T 2acv_A 339 -WAPQVE---VLAHKAIGGFVSHC----GWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVV 410 (463)
T ss_dssp -SCCHHH---HHHSTTEEEEEECC----CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCC
T ss_pred -cCCHHH---HhCCCccCeEEecC----CchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccc
Confidence 666544 454 2477888753 2469999999999999975433 3444 4566688888 2 2 2
Q ss_pred CHHHHHHHHHHHH
Q 036539 677 NGDESSDKIADFF 689 (749)
Q Consensus 677 d~e~lA~aI~~~l 689 (749)
+.++++++|.+++
T Consensus 411 ~~~~l~~ai~~ll 423 (463)
T 2acv_A 411 AAEEIEKGLKDLM 423 (463)
T ss_dssp CHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHH
Confidence 6788888886543
No 58
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=97.66 E-value=0.0073 Score=67.57 Aligned_cols=145 Identities=12% Similarity=0.040 Sum_probs=82.7
Q ss_pred CCcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHH-HHHHHcCCCCcEEEecCc
Q 036539 531 KKPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMH-ALMEKYQLKGQMRWIAAQ 609 (749)
Q Consensus 531 ~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~-~li~~~~L~~~V~flG~~ 609 (749)
+..+.++.|..... ..+.+.+.+..+.+. +++++++-+... .+.+- .+.++ ..+++...+
T Consensus 273 ~~vVyvsfGS~~~~-~~~~~~el~~~l~~~--~~~flw~~~~~~------------~~~lp~~~~~~--~~~~~~vv~-- 333 (454)
T 3hbf_A 273 SSVVYISFGSVVTP-PPHELTALAESLEEC--GFPFIWSFRGDP------------KEKLPKGFLER--TKTKGKIVA-- 333 (454)
T ss_dssp TCEEEEECCSSCCC-CHHHHHHHHHHHHHH--CCCEEEECCSCH------------HHHSCTTHHHH--TTTTEEEES--
T ss_pred CceEEEecCCCCcC-CHHHHHHHHHHHHhC--CCeEEEEeCCcc------------hhcCCHhHHhh--cCCceEEEe--
Confidence 34456777877642 334455555444432 355665543321 01110 11122 246788888
Q ss_pred cCcCChHHHHHHHHccCc--EEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccC-ceEEEECC--CCHHH
Q 036539 610 SDRLRNGELYRCIADTKG--AFVQPALYEAFGLTVIEAMNCGLPTFATNQGG----PAEIIVDG-VSGFHIDP--YNGDE 680 (749)
Q Consensus 610 ~~~~~~~el~~~la~aad--vfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG----~~EiI~dg-~~G~lv~p--~d~e~ 680 (749)
+++..++. + .++ +||.-. =-.+++||+++|+|+|+-...+ .+..+.+. +.|..++. -+.++
T Consensus 334 --w~Pq~~vL---~-h~~v~~fvtH~----G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~ 403 (454)
T 3hbf_A 334 --WAPQVEIL---K-HSSVGVFLTHS----GWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKES 403 (454)
T ss_dssp --SCCHHHHH---H-STTEEEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHH
T ss_pred --eCCHHHHH---h-hcCcCeEEecC----CcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHH
Confidence 77765544 4 477 666542 1358999999999999964433 34455553 68888864 35788
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 036539 681 SSDKIADFFEACKVDPTYWNKFSTEGLKR 709 (749)
Q Consensus 681 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~ 709 (749)
++++|.+++ .++ ..++|.+++++.
T Consensus 404 l~~av~~ll----~~~-~~~~~r~~a~~l 427 (454)
T 3hbf_A 404 IKKALELTM----SSE-KGGIMRQKIVKL 427 (454)
T ss_dssp HHHHHHHHH----SSH-HHHHHHHHHHHH
T ss_pred HHHHHHHHH----CCC-hHHHHHHHHHHH
Confidence 888886544 664 234455555443
No 59
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=97.29 E-value=0.0043 Score=73.01 Aligned_cols=143 Identities=13% Similarity=0.027 Sum_probs=100.3
Q ss_pred hc-CccCC-----CCCcEEEEEecccCCCCHHH-HHHH---HHHhHcc-------------CCCeEEEEEeccCCCCCCc
Q 036539 523 HI-GYLAD-----RKKPIIFSMARLDVVKNLTG-LTEW---YGKNKRL-------------RNLVNLVIVGAFFDPSKSK 579 (749)
Q Consensus 523 ~~-g~l~~-----~~k~vIl~vGRL~~~Kgl~~-LieA---~~~l~~~-------------~~~v~LvIVG~g~~~~~~~ 579 (749)
+. |+..+ ++...++++-|+..+|.... ++.. +.+++.. .....+++.|...+ .
T Consensus 585 ~~~g~~ld~~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP----~ 660 (879)
T 1ygp_A 585 ENDGVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAP----G 660 (879)
T ss_dssp TTTTCCCSCSTTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCT----T
T ss_pred HcCCcEecCCCCCCCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCCCeEEEEeccCCC----C
Confidence 44 76667 78889999999999999888 4544 3333322 12356666555443 2
Q ss_pred chhHHHHHHHHHHHHHHc----CCCC--cEEEecCccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCc
Q 036539 580 DREETAEIKKMHALMEKY----QLKG--QMRWIAAQSDRLRNGELYRCIADTKGAFVQPAL--YEAFGLTVIEAMNCGLP 651 (749)
Q Consensus 580 d~ee~~~~~~l~~li~~~----~L~~--~V~flG~~~~~~~~~el~~~la~aadvfV~PS~--~E~fGLtvlEAMa~GlP 651 (749)
+..-...++.+..+++.. .+.+ +|.|+. ..+. .+.+.+-.++||-.+-|. .|+.|..=+=+|.-|.+
T Consensus 661 y~~aK~iIklI~~va~~iN~Dp~v~~~LKVVFle----nY~V-slAe~iipaaDvseqistag~EASGTsnMKfalNGaL 735 (879)
T 1ygp_A 661 YYMAKLIIKLINCVADIVNNDESIEHLLKVVFVA----DYNV-SKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGL 735 (879)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCGGGTTSEEEEEET----TCCH-HHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCE
T ss_pred cHHHHHHHHHHHHHHHHhccChhhCCceEEEEeC----CCCH-HHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCe
Confidence 344444455555555422 2445 799997 4444 455555558999999887 89999999999999999
Q ss_pred EEEcCcccccccccc--CceEEEEC
Q 036539 652 TFATNQGGPAEIIVD--GVSGFHID 674 (749)
Q Consensus 652 VVat~~GG~~EiI~d--g~~G~lv~ 674 (749)
+++|--|...|+.++ .+|+|+|-
T Consensus 736 tlgtlDGanvEi~e~vG~eN~fiFG 760 (879)
T 1ygp_A 736 IIGTVDGANVEITREIGEDNVFLFG 760 (879)
T ss_dssp EEEESCTHHHHHHHHHCGGGSEEES
T ss_pred eeecccchhHHHHHHcCcccEEEcc
Confidence 999999999999865 45888875
No 60
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=97.19 E-value=0.0054 Score=64.26 Aligned_cols=94 Identities=11% Similarity=0.076 Sum_probs=61.6
Q ss_pred CcEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccC
Q 036539 532 KPIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSD 611 (749)
Q Consensus 532 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~ 611 (749)
+.+++++|..+...-...+++++.. . .. -.+|.|.+.. ..+++++.+++. ++++..++..
T Consensus 158 ~~ILv~~GG~d~~~l~~~vl~~L~~---~-~~-i~vv~G~~~~-----------~~~~l~~~~~~~---~~v~v~~~~~- 217 (282)
T 3hbm_A 158 YDFFICMGGTDIKNLSLQIASELPK---T-KI-ISIATSSSNP-----------NLKKLQKFAKLH---NNIRLFIDHE- 217 (282)
T ss_dssp EEEEEECCSCCTTCHHHHHHHHSCT---T-SC-EEEEECTTCT-----------THHHHHHHHHTC---SSEEEEESCS-
T ss_pred CeEEEEECCCchhhHHHHHHHHhhc---C-CC-EEEEECCCch-----------HHHHHHHHHhhC---CCEEEEeCHH-
Confidence 3466788877654323344444432 1 12 3455666644 145565555543 4799998544
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATN 656 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~ 656 (749)
++..+|+. ||+.|.+ -|.|+.|++++|+|+|.-.
T Consensus 218 -----~m~~~m~~-aDlvI~~-----gG~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 218 -----NIAKLMNE-SNKLIIS-----ASSLVNEALLLKANFKAIC 251 (282)
T ss_dssp -----CHHHHHHT-EEEEEEE-----SSHHHHHHHHTTCCEEEEC
T ss_pred -----HHHHHHHH-CCEEEEC-----CcHHHHHHHHcCCCEEEEe
Confidence 68889994 9999995 3689999999999999864
No 61
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.18 E-value=0.0098 Score=63.25 Aligned_cols=100 Identities=16% Similarity=0.045 Sum_probs=65.5
Q ss_pred CcEEEEEec-ccCCCCHH--HHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcC--C-CCcEEE
Q 036539 532 KPIIFSMAR-LDVVKNLT--GLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQ--L-KGQMRW 605 (749)
Q Consensus 532 k~vIl~vGR-L~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~--L-~~~V~f 605 (749)
+.+++..|. ..+.|... .+.+++..+.+. +++++++|+..+ .+...++.+..+ . ...+.+
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~g~~~e------------~~~~~~i~~~~~~~~~~~~~~l 246 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKD------------HEAGNEILAALNTEQQAWCRNL 246 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGG------------HHHHHHHHTTSCHHHHTTEEEC
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHC--CCeEEEEeChhh------------HHHHHHHHHhhhhccccceEec
Confidence 345566665 54556654 888888888764 688999876543 222233332221 0 123456
Q ss_pred ecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 606 IAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 606 lG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
.| ..+..++..+++. +|++|... .|..-+ |.++|+|+|+-
T Consensus 247 ~g----~~sl~e~~ali~~-a~l~I~~D----sg~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 247 AG----ETQLDQAVILIAA-CKAIVTND----SGLMHV-AAALNRPLVAL 286 (348)
T ss_dssp TT----TSCHHHHHHHHHT-SSEEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred cC----cCCHHHHHHHHHh-CCEEEecC----CHHHHH-HHHcCCCEEEE
Confidence 66 6778899999995 99999985 244444 99999999984
No 62
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.62 E-value=0.18 Score=54.05 Aligned_cols=102 Identities=15% Similarity=0.204 Sum_probs=68.2
Q ss_pred CCCCcEE-EEEecccCCCC--HHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEE
Q 036539 529 DRKKPII-FSMARLDVVKN--LTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRW 605 (749)
Q Consensus 529 ~~~k~vI-l~vGRL~~~Kg--l~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~f 605 (749)
++++++| +..|.=.+.|. .+.+.+.+..+.+. +.+++++|+..+ .+...++++..+ ...+.+
T Consensus 182 ~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~--g~~vvl~g~~~e------------~~~~~~i~~~~~-~~~~~l 246 (349)
T 3tov_A 182 TDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL--GYKTVFFGGPMD------------LEMVQPVVEQME-TKPIVA 246 (349)
T ss_dssp CTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH--TCEEEECCCTTT------------HHHHHHHHHTCS-SCCEEC
T ss_pred CCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC--CCeEEEEeCcch------------HHHHHHHHHhcc-cccEEe
Confidence 4445554 55554334554 45788888887654 578888886544 334444555444 234566
Q ss_pred ecCccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 606 IAAQSDRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 606 lG~~~~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
.| ..+-.++..+++. +|++|..- .|..-+ |.++|+|+|+-
T Consensus 247 ~g----~~sl~e~~ali~~-a~~~i~~D----sG~~Hl-Aaa~g~P~v~l 286 (349)
T 3tov_A 247 TG----KFQLGPLAAAMNR-CNLLITND----SGPMHV-GISQGVPIVAL 286 (349)
T ss_dssp TT----CCCHHHHHHHHHT-CSEEEEES----SHHHHH-HHTTTCCEEEE
T ss_pred eC----CCCHHHHHHHHHh-CCEEEECC----CCHHHH-HHhcCCCEEEE
Confidence 67 6778999999995 99999872 255555 89999999995
No 63
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=87.70 E-value=1.2 Score=46.62 Aligned_cols=97 Identities=14% Similarity=0.114 Sum_probs=63.1
Q ss_pred cEEEEEecccCCCCH--HHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCcc
Q 036539 533 PIIFSMARLDVVKNL--TGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQS 610 (749)
Q Consensus 533 ~vIl~vGRL~~~Kgl--~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~ 610 (749)
.+++..|.=.+.|.. +.+.+.+..+.+. +++++++++++. +.+...++.+.. +++.+.|
T Consensus 180 ~i~l~pga~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~~g~~~-----------e~~~~~~i~~~~---~~~~l~g--- 240 (326)
T 2gt1_A 180 YAVFLHATTRDDKHWPEEHWRELIGLLADS--GIRIKLPWGAPH-----------EEERAKRLAEGF---AYVEVLP--- 240 (326)
T ss_dssp EEEEECCCSSGGGSCCHHHHHHHHHHTTTT--CCEEEECCSSHH-----------HHHHHHHHHTTC---TTEEECC---
T ss_pred EEEEEeCCCCccccCCHHHHHHHHHHHHHC--CCcEEEecCCHH-----------HHHHHHHHHhhC---CcccccC---
Confidence 345555543444544 4788888877642 688888754433 122333333332 3466777
Q ss_pred CcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 036539 611 DRLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFAT 655 (749)
Q Consensus 611 ~~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat 655 (749)
..+-.++..+++. ||++|..- .|..=+ |.+.|+|+|+-
T Consensus 241 -~~sl~el~ali~~-a~l~I~~D----SG~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 241 -KMSLEGVARVLAG-AKFVVSVD----TGLSHL-TAALDRPNITV 278 (326)
T ss_dssp -CCCHHHHHHHHHT-CSEEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred -CCCHHHHHHHHHh-CCEEEecC----CcHHHH-HHHcCCCEEEE
Confidence 7778999999995 99999883 255555 77799999984
No 64
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=86.20 E-value=0.56 Score=47.14 Aligned_cols=64 Identities=9% Similarity=-0.004 Sum_probs=42.6
Q ss_pred HHHHHHH-ccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc--------ccccccCceEEEECCCCHHHHHHHHHH
Q 036539 617 ELYRCIA-DTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGP--------AEIIVDGVSGFHIDPYNGDESSDKIAD 687 (749)
Q Consensus 617 el~~~la-~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~--------~EiI~dg~~G~lv~p~d~e~lA~aI~~ 687 (749)
++..+|+ . ||++|.=+ =..|++|++++|+|.|.-..... ++.+.+...++.+ +++.++++|.+
T Consensus 124 ~m~~~l~~~-AdlvIsha----GagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~---~~~~L~~~i~~ 195 (224)
T 2jzc_A 124 KMQSIIRDY-SDLVISHA----GTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC---APTETGLIAGL 195 (224)
T ss_dssp SHHHHHHHH-CSCEEESS----CHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE---CSCTTTHHHHH
T ss_pred hHHHHHHhc-CCEEEECC----cHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc---CHHHHHHHHHH
Confidence 6778888 7 99998864 35699999999999998654321 2233333345655 34556666654
Q ss_pred H
Q 036539 688 F 688 (749)
Q Consensus 688 ~ 688 (749)
+
T Consensus 196 l 196 (224)
T 2jzc_A 196 R 196 (224)
T ss_dssp H
T ss_pred H
Confidence 3
No 65
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=74.40 E-value=15 Score=43.08 Aligned_cols=64 Identities=6% Similarity=0.069 Sum_probs=42.1
Q ss_pred HHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCcEEEcCc---------cccccccccCceEEEECCCCHHHHHHHHHH
Q 036539 617 ELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQ---------GGPAEIIVDGVSGFHIDPYNGDESSDKIAD 687 (749)
Q Consensus 617 el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~~---------GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ 687 (749)
++..++. .+|++|.= ++-+++|++..++|||-... .|.-.-..+...|-++. +.+++.++|.+
T Consensus 608 di~~ll~-~aD~lITD-----ySSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~~~--~~~eL~~~i~~ 679 (729)
T 3l7i_A 608 DVSELFL-ISDCLITD-----YSSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPIYT--EPYGLAKELKN 679 (729)
T ss_dssp CHHHHHH-TCSEEEES-----SCTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCEES--SHHHHHHHHTT
T ss_pred CHHHHHH-HhCEEEee-----chHHHHhHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCeEC--CHHHHHHHHhh
Confidence 6777787 59998864 56699999999999998621 12111111222344444 78898888865
Q ss_pred H
Q 036539 688 F 688 (749)
Q Consensus 688 ~ 688 (749)
+
T Consensus 680 ~ 680 (729)
T 3l7i_A 680 L 680 (729)
T ss_dssp H
T ss_pred h
Confidence 4
No 66
>2dvz_A BUGE, putative exported protein; periplamsic binding proteins, carboxylate binding, glutamate, transport protein; HET: GLU; 2.30A {Bordetella pertussis}
Probab=73.22 E-value=43 Score=34.89 Aligned_cols=149 Identities=10% Similarity=0.006 Sum_probs=91.4
Q ss_pred cEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCC-cEEEecCccC
Q 036539 533 PIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKG-QMRWIAAQSD 611 (749)
Q Consensus 533 ~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~-~V~flG~~~~ 611 (749)
+.++.+..=.+.|.+..|++++++.+. .+++-..|.|.. . .-....+.+..|+.- +|.|.|
T Consensus 116 ~~~lvv~~ds~~~tl~dL~~~ak~~p~---~~~~g~~g~Gs~-------~----hl~~~~l~~~~Gi~~~~Vpy~G---- 177 (314)
T 2dvz_A 116 ANVVAVNPKFPAKDFKGFLEELKKNPG---KYSYGSSGTCGV-------L----HLMGESFKMATGTDIVHVPYKG---- 177 (314)
T ss_dssp CEEEEECTTSSCSSHHHHHHHHHTSTT---TCEEEESCTTSH-------H----HHHHHHHHHHHTCCCEEEECSS----
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHhCCC---cEEEeCCCCCcH-------H----HHHHHHHHHHhCCCeEEcccCC----
Confidence 345555555678999999988776432 355544443322 1 111233445567642 344444
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCc-EEEc----------Ccccccc-----ccccCceEEEECC
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP-TFAT----------NQGGPAE-----IIVDGVSGFHIDP 675 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlP-VVat----------~~GG~~E-----iI~dg~~G~lv~p 675 (749)
..+.+..++....|+++... -.+.+....|.- +++. +++.+.| +....-.|+.++.
T Consensus 178 --~~~a~~al~~G~vD~~~~~~------~~~~~~i~~g~lr~Lav~~~~r~~~~pdvPt~~e~G~~~~~~~~w~gl~ap~ 249 (314)
T 2dvz_A 178 --SGPAVADAVGGQIELIFDNL------PSSMPQIQAGKLRAMAIAWPTRIDAIKDVPTFADAGFPVLNQPVWYGLLAPK 249 (314)
T ss_dssp --HHHHHHHHHHTSSSEEEEEH------HHHHHHHHTTSSEEEEEESSSCCGGGTTSCBTTTTTCGGGCCCEEEEEEEET
T ss_pred --HHHHHHHHHcCCceEEEEcH------HHHHHHHHcCCEEEEEecCccccccCCCCCCHHhcCCCceEEeEEEEEEEcC
Confidence 24577778887789887753 256667777742 3332 1221211 1112236888988
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 036539 676 YNGDESSDKIADFFEACKVDPTYWNKFSTEGL 707 (749)
Q Consensus 676 ~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~ 707 (749)
+.++++.++|.+.+.+..+||+..+.+.+.+.
T Consensus 250 g~p~~vv~~l~~al~~~~~~p~~~~~~~~~g~ 281 (314)
T 2dvz_A 250 GTPMDVVNKLRDAAVVALKDPKVIKALDDQGS 281 (314)
T ss_dssp TCCHHHHHHHHHHHHHHHTCHHHHHHHHHHTE
T ss_pred CCCHHHHHHHHHHHHHHHcCHHHHHHHHHCCC
Confidence 88999999999999999999998888766654
No 67
>2f5x_A BUGD; periplasmic binding protein, transport protein; 1.72A {Bordetella pertussis tohama I}
Probab=72.06 E-value=46 Score=34.62 Aligned_cols=149 Identities=14% Similarity=0.134 Sum_probs=91.3
Q ss_pred cEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCC-cEEEecCccC
Q 036539 533 PIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKG-QMRWIAAQSD 611 (749)
Q Consensus 533 ~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~-~V~flG~~~~ 611 (749)
+.++.+..=.+.|.+..|++++++.+. .+++-..|.|.. . .-....+.+..|+.- +|.|.|
T Consensus 112 ~~~lvv~~ds~~~sl~dL~~~ak~~p~---~~~~g~~g~Gs~-------~----hl~~~~l~~~~Gi~~~~Vpy~G---- 173 (312)
T 2f5x_A 112 PMTIIARGDFPPNNIKELAEYVKKNAD---KISLANAGIGAA-------S----HLCGTMLVEALGVNLLTIPYKG---- 173 (312)
T ss_dssp EEEEEECTTCSCCSHHHHHHHHHHHGG---GCEEEESSTTSH-------H----HHHHHHHHHHHTCCCEEEECSS----
T ss_pred cEEEEEeCCCCCCCHHHHHHHHHhCCC---ceEEeCCCCCcH-------H----HHHHHHHHHHHCCCeEEeccCC----
Confidence 345555444679999999999887654 345544443322 1 111233455567642 344433
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC-cEEEc----------Ccccccc-----ccccCceEEEECC
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL-PTFAT----------NQGGPAE-----IIVDGVSGFHIDP 675 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~Gl-PVVat----------~~GG~~E-----iI~dg~~G~lv~p 675 (749)
..+.+..++....|+.+... -++.+.+..|. -+++. +++...| +....-.|+.++.
T Consensus 174 --~~~a~~aL~~G~VD~~~~~~------~~~~~~i~~g~lr~Lav~~~~r~~~~pdvPt~~E~G~~~~~~~~w~gl~ap~ 245 (312)
T 2f5x_A 174 --TAPAMNDLLGKQVDLMCDQT------TNTTQQITSGKVKAYAVTSLKRVPTLPDLPTMDESGYKGFEVGIWHGMWAPK 245 (312)
T ss_dssp --HHHHHHHHHTTSSCEEEEEH------HHHHHHHHTTSSEEEEECSSSCCTTSTTSCBTTTTTCTTCCCEEEEEEEEET
T ss_pred --hHHHHHHHHcCCccEEEech------HHHHHHHHcCCeEEEEEcCccchhhcCCCCCHhhcCCCCeeEEEEEEEEEcC
Confidence 24567777777788887652 25566677774 33432 1221111 1112236888888
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 036539 676 YNGDESSDKIADFFEACKVDPTYWNKFSTEGL 707 (749)
Q Consensus 676 ~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~ 707 (749)
+.++++.++|.+.+.+...||+..+.+.+.+.
T Consensus 246 g~p~~vv~~l~~al~~~~~~p~~~~~~~~~g~ 277 (312)
T 2f5x_A 246 GTPKPVVDKLVKSLQAGLADPKFQERMKQLGA 277 (312)
T ss_dssp TCCHHHHHHHHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHHcCHHHHHHHHHCCC
Confidence 88999999999999999999998887765554
No 68
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=67.79 E-value=56 Score=27.94 Aligned_cols=109 Identities=7% Similarity=0.016 Sum_probs=71.3
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc--------cCcEEEECCC-
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD--------TKGAFVQPAL- 634 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~--------aadvfV~PS~- 634 (749)
.+++|+.+.+. ..+.+....++.|....|.... +..+....+.. ..|++++=..
T Consensus 3 ~~ilivdd~~~-----------~~~~l~~~L~~~~~~~~v~~~~------~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~ 65 (140)
T 1k68_A 3 KKIFLVEDNKA-----------DIRLIQEALANSTVPHEVVTVR------DGMEAMAYLRQEGEYANASRPDLILLXLNL 65 (140)
T ss_dssp CEEEEECCCHH-----------HHHHHHHHHHTCSSCCEEEEEC------SHHHHHHHHTTCGGGGSCCCCSEEEECSSC
T ss_pred CeEEEEeCCHH-----------HHHHHHHHHHhcCCCceEEEEC------CHHHHHHHHHcccccccCCCCcEEEEecCC
Confidence 46777776543 3556677777666433455543 35566777663 4688776443
Q ss_pred CCCCcHHHHHHHH-----cCCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 635 YEAFGLTVIEAMN-----CGLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 635 ~E~fGLtvlEAMa-----~GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.+.-|+.+++.+. ..+|+|. |.... ..+.+..|..|++..|-+.+++..+|..++
T Consensus 66 ~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~ 129 (140)
T 1k68_A 66 PKKDGREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSANLSQLFQIVKGIE 129 (140)
T ss_dssp SSSCHHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHcCcccccccEEEEecCCcHHHHHHHHHhchhheecCCCCHHHHHHHHHHHH
Confidence 3456777777775 4678876 44332 234456788999999999999999997665
No 69
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=65.49 E-value=56 Score=28.86 Aligned_cols=108 Identities=8% Similarity=0.122 Sum_probs=72.8
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH----------ccCcEEEECC
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA----------DTKGAFVQPA 633 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la----------~aadvfV~PS 633 (749)
.+++||.+.+. ..+.+.+..++.+....|.... +..+..+.+. ...|++++=.
T Consensus 5 ~~ILivddd~~-----------~~~~l~~~L~~~g~~~~v~~~~------~~~~al~~l~~~~~~~~~~~~~~dliilD~ 67 (152)
T 3heb_A 5 VTIVMIEDDLG-----------HARLIEKNIRRAGVNNEIIAFT------DGTSALNYLFGDDKSGRVSAGRAQLVLLDL 67 (152)
T ss_dssp CEEEEECCCHH-----------HHHHHHHHHHHTTCCCCEEEES------SHHHHHHHHHCTTSSSGGGTTCBEEEEECS
T ss_pred ceEEEEeCCHH-----------HHHHHHHHHHhCCCcceEEEeC------CHHHHHHHHhccccccccccCCCCEEEEeC
Confidence 57788876643 3566777788877654566644 3456666663 2357777643
Q ss_pred C-CCCCcHHHHHHHHc-----CCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHH
Q 036539 634 L-YEAFGLTVIEAMNC-----GLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADF 688 (749)
Q Consensus 634 ~-~E~fGLtvlEAMa~-----GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~ 688 (749)
. .+.-|+.+++.+.. ++|+|. |.... ..+.+..|..+|+..|.+.+++.++|.++
T Consensus 68 ~l~~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~ 132 (152)
T 3heb_A 68 NLPDMTGIDILKLVKENPHTRRSPVVILTTTDDQREIQRCYDLGANVYITKPVNYENFANAIRQL 132 (152)
T ss_dssp BCSSSBHHHHHHHHHHSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHhcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHH
Confidence 3 45568888887765 678877 44333 23455678899999999999999998654
No 70
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=64.02 E-value=43 Score=29.23 Aligned_cols=111 Identities=14% Similarity=0.179 Sum_probs=72.9
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCC-CCCCcH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPAL-YEAFGL 640 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~-~E~fGL 640 (749)
..+++|+.+... ..+.+....++.+....|.... +..+....+.. ..|++++=.. .+.-|+
T Consensus 5 ~~~ILivdd~~~-----------~~~~l~~~L~~~~~~~~v~~~~------~~~~a~~~l~~~~~dlii~D~~l~~~~g~ 67 (144)
T 3kht_A 5 SKRVLVVEDNPD-----------DIALIRRVLDRKDIHCQLEFVD------NGAKALYQVQQAKYDLIILDIGLPIANGF 67 (144)
T ss_dssp CEEEEEECCCHH-----------HHHHHHHHHHHTTCCEEEEEES------SHHHHHHHHTTCCCSEEEECTTCGGGCHH
T ss_pred CCEEEEEeCCHH-----------HHHHHHHHHHhcCCCeeEEEEC------CHHHHHHHhhcCCCCEEEEeCCCCCCCHH
Confidence 467888876543 3556777777776533344433 34556665543 3577776433 345688
Q ss_pred HHHHHHHc-----CCcEEE-cCccc---cccccccCceEEEECCC-CHHHHHHHHHHHHH
Q 036539 641 TVIEAMNC-----GLPTFA-TNQGG---PAEIIVDGVSGFHIDPY-NGDESSDKIADFFE 690 (749)
Q Consensus 641 tvlEAMa~-----GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~-d~e~lA~aI~~~l~ 690 (749)
.+++.+.. ++|+|+ |.... ..+.+..|..+|+..|. +.+++.++|..+++
T Consensus 68 ~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~~l~~~i~~~l~ 127 (144)
T 3kht_A 68 EVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSVVDKSSNNVTDFYGRIYAIFS 127 (144)
T ss_dssp HHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCcHHHHHHHHHHHHH
Confidence 88888765 678887 33332 23445678899999999 99999999977664
No 71
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=62.80 E-value=72 Score=27.21 Aligned_cols=108 Identities=13% Similarity=0.283 Sum_probs=68.7
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-c-cCcEEEECC-CCCCCcH
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-D-TKGAFVQPA-LYEAFGL 640 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~-aadvfV~PS-~~E~fGL 640 (749)
.+++|+.+.+. ..+.+....++.|.. .+.... +..+....+. . ..|++++=. ..+.-|+
T Consensus 6 ~~iLivdd~~~-----------~~~~l~~~L~~~g~~-~v~~~~------~~~~a~~~~~~~~~~dlvi~D~~~p~~~g~ 67 (129)
T 3h1g_A 6 MKLLVVDDSST-----------MRRIIKNTLSRLGYE-DVLEAE------HGVEAWEKLDANADTKVLITDWNMPEMNGL 67 (129)
T ss_dssp CCEEEECSCHH-----------HHHHHHHHHHHTTCC-CEEEES------SHHHHHHHHHHCTTCCEEEECSCCSSSCHH
T ss_pred cEEEEEeCCHH-----------HHHHHHHHHHHcCCc-EEEEeC------CHHHHHHHHHhCCCCCEEEEeCCCCCCCHH
Confidence 56777776543 355677777776643 244332 2344444443 2 257777533 2455688
Q ss_pred HHHHHHHc-----CCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 641 TVIEAMNC-----GLPTFA-TNQGGP---AEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 641 tvlEAMa~-----GlPVVa-t~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.+++.+.. .+|+|. |..+.. .+.+..|..+|+..|-+++++.++|...+
T Consensus 68 ~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~l~~~l 125 (129)
T 3h1g_A 68 DLVKKVRSDSRFKEIPIIMITAEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVL 125 (129)
T ss_dssp HHHHHHHTSTTCTTCCEEEEESCCSHHHHHHHHHHTCCEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCeEEEEeCCCChHHHHHHHHcCccEEEeCCCCHHHHHHHHHHHh
Confidence 88888764 578877 444433 34456788999999999999999996544
No 72
>2qpq_A Protein BUG27; alpha/beta domain, venus flytrap, transport protein; HET: CIT; 1.92A {Bordetella pertussis}
Probab=62.60 E-value=37 Score=35.12 Aligned_cols=149 Identities=15% Similarity=0.070 Sum_probs=88.2
Q ss_pred cEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCC-CcEEEecCccC
Q 036539 533 PIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLK-GQMRWIAAQSD 611 (749)
Q Consensus 533 ~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~-~~V~flG~~~~ 611 (749)
+.++.+..=.+.|.+..|++++++.+. .+++-..|.|.. . .-....+.+..|+. .+|.|.|
T Consensus 103 ~~~lvv~~~s~~~sl~dL~~~ak~~p~---~~~~g~~g~Gs~-------~----hl~~~~l~~~~G~~~~~Vpy~g---- 164 (301)
T 2qpq_A 103 PSVFVVPAGSKYKTLGELMAAAKQTNT---QVTYGSCGNGTP-------Q----HLAGELLNVSAKTHMVHVPYKG---- 164 (301)
T ss_dssp EEEEEEETTCSCCSHHHHHHHTCSSSC---CCEEEESSTTSH-------H----HHHHHHHHHHHTCCCEEEECSS----
T ss_pred CeEEEEeCCCCCCCHHHHHHHHHhCCC---ceEEecCCCCcH-------H----HHHHHHHHHHhCCCeEEeccCC----
Confidence 345555444678999999887654322 344444333322 1 11123344556764 2344444
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCc-EEE-c---------Ccccccc-----ccccCceEEEECC
Q 036539 612 RLRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLP-TFA-T---------NQGGPAE-----IIVDGVSGFHIDP 675 (749)
Q Consensus 612 ~~~~~el~~~la~aadvfV~PS~~E~fGLtvlEAMa~GlP-VVa-t---------~~GG~~E-----iI~dg~~G~lv~p 675 (749)
..+.+..++....|+++... -++.+....|.- +++ + +++...| +....-.|+.++.
T Consensus 165 --~~~a~~al~~G~vD~~~~~~------~~~~~~i~~g~lr~Lav~~~~r~~~~pdvPt~~e~G~~~~~~~~w~gl~ap~ 236 (301)
T 2qpq_A 165 --CGPALNDVLGSQIGLAVVTA------SSAIPFIKAGKLQALAVTSKERSALLPEVPTVAEQGVAGYELNQWHGLLVPG 236 (301)
T ss_dssp --HHHHHHHHHTTSSSCEEEEH------HHHHHHHHTTSEEEEEECSSSCCTTCTTSCBSGGGTCTTCCCEEEEEEEEET
T ss_pred --hHHHHHHHHCCCccEEEEcH------HHHHHHHhcCCeEEEEEcCCccccccCCCCChHHhCCCceEEEeEEEEEecC
Confidence 24567777777788877652 256666777752 333 1 1111111 1112236888888
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 036539 676 YNGDESSDKIADFFEACKVDPTYWNKFSTEGL 707 (749)
Q Consensus 676 ~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~ 707 (749)
+.++++.++|.+.+.+...||+..+.+.+.+.
T Consensus 237 g~p~~vv~~l~~al~~~~~~~~~~~~~~~~g~ 268 (301)
T 2qpq_A 237 ATPMAVRQKLYDGIAKVMQRDDVQKKLADLGY 268 (301)
T ss_dssp TCCHHHHHHHHHHHHHHHTCHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHHcCHHHHHHHHHCCC
Confidence 88999999999999999999998888766554
No 73
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=61.24 E-value=71 Score=27.64 Aligned_cols=110 Identities=10% Similarity=0.157 Sum_probs=72.1
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-----------ccCcEEEE
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-----------DTKGAFVQ 631 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-----------~aadvfV~ 631 (749)
..+++|+.+.+. ..+.+....++.+....|.... +..+....+. ...|++++
T Consensus 6 ~~~iLivdd~~~-----------~~~~l~~~L~~~g~~~~v~~~~------~~~~al~~l~~~~~~~~~~~~~~~dlvi~ 68 (149)
T 1k66_A 6 TQPLLVVEDSDE-----------DFSTFQRLLQREGVVNPIYRCI------TGDQALDFLYQTGSYCNPDIAPRPAVILL 68 (149)
T ss_dssp TSCEEEECCCHH-----------HHHHHHHHHHHTTBCSCEEEEC------SHHHHHHHHHTCCSSSCGGGCCCCSEEEE
T ss_pred CccEEEEECCHH-----------HHHHHHHHHHHcCCCceEEEEC------CHHHHHHHHHhcccccCcccCCCCcEEEE
Confidence 356777776543 3556777777766533555543 3456666665 24688776
Q ss_pred CCC-CCCCcHHHHHHHH-----cCCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 632 PAL-YEAFGLTVIEAMN-----CGLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 632 PS~-~E~fGLtvlEAMa-----~GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
=.. .+.-|+.+++.+. ..+|+|. |.... ..+.+..|..+++..|.+.+++.++|..++
T Consensus 69 D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~ 136 (149)
T 1k66_A 69 DLNLPGTDGREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIVKPLEIDRLTETVQTFI 136 (149)
T ss_dssp CSCCSSSCHHHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred ECCCCCCCHHHHHHHHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHHH
Confidence 443 3456788888775 4578776 44333 234456788999999999999999997665
No 74
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=60.92 E-value=62 Score=29.11 Aligned_cols=109 Identities=15% Similarity=0.261 Sum_probs=69.2
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECC-CCCCCcH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPA-LYEAFGL 640 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS-~~E~fGL 640 (749)
+.+++||-+.+. .++-+....++.|.. .|.... +-.+..+.+. ..-|+.++=- ..+--|+
T Consensus 12 ~~rILiVDD~~~-----------~r~~l~~~L~~~G~~-~v~~a~------~g~~al~~~~~~~~DlillD~~MP~mdG~ 73 (134)
T 3to5_A 12 NMKILIVDDFST-----------MRRIVKNLLRDLGFN-NTQEAD------DGLTALPMLKKGDFDFVVTDWNMPGMQGI 73 (134)
T ss_dssp TCCEEEECSCHH-----------HHHHHHHHHHHTTCC-CEEEES------SHHHHHHHHHHHCCSEEEEESCCSSSCHH
T ss_pred CCEEEEEeCCHH-----------HHHHHHHHHHHcCCc-EEEEEC------CHHHHHHHHHhCCCCEEEEcCCCCCCCHH
Confidence 567888876543 345566677777653 243322 1223333333 2357776432 2355688
Q ss_pred HHHHHHH-----cCCcEEE-cCccccc---cccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 641 TVIEAMN-----CGLPTFA-TNQGGPA---EIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 641 tvlEAMa-----~GlPVVa-t~~GG~~---EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.+++.+- ..+|||. |..+... +....|.++|+..|-+++++.++|.+++
T Consensus 74 el~~~ir~~~~~~~ipvI~lTa~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~l 131 (134)
T 3to5_A 74 DLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIF 131 (134)
T ss_dssp HHHHHHHHSTTTTTCCEEEEESSCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
Confidence 8888875 4689887 5555443 3346788999999999999999997654
No 75
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=59.00 E-value=83 Score=27.35 Aligned_cols=110 Identities=12% Similarity=0.173 Sum_probs=70.4
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCC-CCCCcH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPAL-YEAFGL 640 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~-~E~fGL 640 (749)
..+++|+.+.+. ..+.+.......|. .|.... +..+....+.. ..|++++=.. .+.-|+
T Consensus 8 ~~~iLivd~~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~a~~~l~~~~~dlii~d~~l~~~~g~ 68 (147)
T 2zay_A 8 WWRIMLVDTQLP-----------ALAASISALSQEGF--DIIQCG------NAIEAVPVAVKTHPHLIITEANMPKISGM 68 (147)
T ss_dssp CEEEEEECTTGG-----------GGHHHHHHHHHHTE--EEEEES------SHHHHHHHHHHHCCSEEEEESCCSSSCHH
T ss_pred CceEEEEeCCHH-----------HHHHHHHHHHHcCC--eEEEeC------CHHHHHHHHHcCCCCEEEEcCCCCCCCHH
Confidence 467888887654 24456666666553 344332 24455555442 3677776433 345678
Q ss_pred HHHHHHHc-----CCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHHHH
Q 036539 641 TVIEAMNC-----GLPTFA-TNQGGP---AEIIVDGVSGFHIDPYNGDESSDKIADFFEA 691 (749)
Q Consensus 641 tvlEAMa~-----GlPVVa-t~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~ 691 (749)
.+++.+.. .+|+|. |..... .+.+..|..+|+..|.+.+++..+|..++..
T Consensus 69 ~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~i~~~~~~ 128 (147)
T 2zay_A 69 DLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDMGFIDFIAKPVNAIRLSARIKRVLKL 128 (147)
T ss_dssp HHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHHHHHHHHH
Confidence 88888764 678876 444332 3345678899999999999999999776643
No 76
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=57.86 E-value=54 Score=28.26 Aligned_cols=105 Identities=5% Similarity=0.036 Sum_probs=65.4
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECCCCCCCcHH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPALYEAFGLT 641 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS~~E~fGLt 641 (749)
..+++|+.+... ..+.+....+..|. .|.... +..+....+. ...|++++| +.-|+.
T Consensus 18 ~~~ilivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~al~~l~~~~~dlvi~~---~~~g~~ 75 (137)
T 2pln_A 18 SMRVLLIEKNSV-----------LGGEIEKGLNVKGF--MADVTE------SLEDGEYLMDIRNYDLVMVS---DKNALS 75 (137)
T ss_dssp CSEEEEECSCHH-----------HHHHHHHHHHHTTC--EEEEES------CHHHHHHHHHHSCCSEEEEC---STTHHH
T ss_pred CCeEEEEeCCHH-----------HHHHHHHHHHHcCc--EEEEeC------CHHHHHHHHHcCCCCEEEEc---CccHHH
Confidence 467778776543 34556666666553 344332 2345555444 235787733 445677
Q ss_pred HHHHHHc---CCcEEE-cCccc---cccccccCceEEEECCC-CHHHHHHHHHHHH
Q 036539 642 VIEAMNC---GLPTFA-TNQGG---PAEIIVDGVSGFHIDPY-NGDESSDKIADFF 689 (749)
Q Consensus 642 vlEAMa~---GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~-d~e~lA~aI~~~l 689 (749)
+++.+.. .+|+|. |.... ..+.+..|..+|+..|. +.+++..+|..++
T Consensus 76 ~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~~l~~~i~~~~ 131 (137)
T 2pln_A 76 FVSRIKEKHSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVARIEARL 131 (137)
T ss_dssp HHHHHHHHSTTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCSCHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCccEEEEeCCCCHHHHHHHHHcCCceeeeCCCCCHHHHHHHHHHHH
Confidence 7666653 788877 44332 33445678899999999 9999999986543
No 77
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=57.32 E-value=93 Score=26.73 Aligned_cols=109 Identities=12% Similarity=0.083 Sum_probs=70.7
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECCC-CCCCcH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPAL-YEAFGL 640 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS~-~E~fGL 640 (749)
..+++|+.+... ..+.+....++.|. .|.... +..+..+.+. ...|++++=.. .+.-|+
T Consensus 6 ~~~iLivdd~~~-----------~~~~l~~~l~~~g~--~v~~~~------~~~~a~~~l~~~~~dlvi~d~~l~~~~g~ 66 (140)
T 3grc_A 6 RPRILICEDDPD-----------IARLLNLMLEKGGF--DSDMVH------SAAQALEQVARRPYAAMTVDLNLPDQDGV 66 (140)
T ss_dssp CSEEEEECSCHH-----------HHHHHHHHHHHTTC--EEEEEC------SHHHHHHHHHHSCCSEEEECSCCSSSCHH
T ss_pred CCCEEEEcCCHH-----------HHHHHHHHHHHCCC--eEEEEC------CHHHHHHHHHhCCCCEEEEeCCCCCCCHH
Confidence 357777776543 35566666776654 244432 2445555554 33577776443 455688
Q ss_pred HHHHHHHc-----CCcEEEc-Ccccc---c-cccccCceEEEECCCCHHHHHHHHHHHHH
Q 036539 641 TVIEAMNC-----GLPTFAT-NQGGP---A-EIIVDGVSGFHIDPYNGDESSDKIADFFE 690 (749)
Q Consensus 641 tvlEAMa~-----GlPVVat-~~GG~---~-EiI~dg~~G~lv~p~d~e~lA~aI~~~l~ 690 (749)
.+++.+.. .+|+|.- ..... . +.+..|..+|+..|.+.+++..+|..+++
T Consensus 67 ~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~l~ 126 (140)
T 3grc_A 67 SLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVSTWLEKPIDENLLILSLHRAID 126 (140)
T ss_dssp HHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCEEECSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCEEEeCCCCHHHHHHHHHHHHH
Confidence 88888765 6788874 33322 2 55667889999999999999999977664
No 78
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=53.92 E-value=75 Score=29.44 Aligned_cols=33 Identities=21% Similarity=0.374 Sum_probs=21.0
Q ss_pred CCCceEEEEcCCCchHHHHHHHHcCCCcEEEEec
Q 036539 365 GGKPDLIIGNYSDGNLVASVMASKLGITQATIAH 398 (749)
Q Consensus 365 ~~~pDIIh~h~~~~~lva~lla~~~gvp~v~t~H 398 (749)
..++-+|+++ +.|+.+|..++.+........+-
T Consensus 60 ~~~~i~l~G~-SmGG~~a~~~a~~~~~~~~~~~~ 92 (202)
T 4fle_A 60 AGQSIGIVGS-SLGGYFATWLSQRFSIPAVVVNP 92 (202)
T ss_dssp TTSCEEEEEE-THHHHHHHHHHHHTTCCEEEESC
T ss_pred CCCcEEEEEE-ChhhHHHHHHHHHhcccchheee
Confidence 4455455555 67778888888777766554443
No 79
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=53.52 E-value=72 Score=28.31 Aligned_cols=112 Identities=13% Similarity=0.173 Sum_probs=72.0
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCC-CCCCcH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPAL-YEAFGL 640 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~-~E~fGL 640 (749)
..+++|+.+.+. ..+.+.+..++.|. .|.... +..+....+.. ..|++++-.. ...-|+
T Consensus 7 ~~~ILivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~al~~l~~~~~dlii~D~~l~~~~g~ 67 (154)
T 3gt7_A 7 AGEILIVEDSPT-----------QAEHLKHILEETGY--QTEHVR------NGREAVRFLSLTRPDLIISDVLMPEMDGY 67 (154)
T ss_dssp CCEEEEECSCHH-----------HHHHHHHHHHTTTC--EEEEES------SHHHHHHHHTTCCCSEEEEESCCSSSCHH
T ss_pred CCcEEEEeCCHH-----------HHHHHHHHHHHCCC--EEEEeC------CHHHHHHHHHhCCCCEEEEeCCCCCCCHH
Confidence 357888876643 34556666666553 343332 34566666652 2577766433 455688
Q ss_pred HHHHHHH-----cCCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHHHHhc
Q 036539 641 TVIEAMN-----CGLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFFEACK 693 (749)
Q Consensus 641 tvlEAMa-----~GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~ 693 (749)
.+++.+. ..+|+|. |.... ..+.+..|..+|+..|-+.+++..+|..++....
T Consensus 68 ~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~~~~ 129 (154)
T 3gt7_A 68 ALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGADDFITKPCKDVVLASHVKRLLSGVK 129 (154)
T ss_dssp HHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHHHCCSEEEESSCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 8888775 3678877 43333 2344567889999999999999999988775443
No 80
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=53.45 E-value=80 Score=27.25 Aligned_cols=107 Identities=9% Similarity=0.068 Sum_probs=70.1
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-------ccCcEEEECCC-
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-------DTKGAFVQPAL- 634 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-------~aadvfV~PS~- 634 (749)
..+++|+.+.+. ..+.+.+..++.+....|.... +..+....+. ...|++++=..
T Consensus 7 ~~~ILivdd~~~-----------~~~~l~~~L~~~g~~~~v~~~~------~~~~a~~~l~~~~~~~~~~~dlii~D~~l 69 (143)
T 2qvg_A 7 KVDILYLEDDEV-----------DIQSVERVFHKISSLIKIEIAK------SGNQALDMLYGRNKENKIHPKLILLDINI 69 (143)
T ss_dssp CCSEEEECCCHH-----------HHHHHHHHHHHHCTTCCEEEES------SHHHHHHHHHTCTTCCCCCCSEEEEETTC
T ss_pred CCeEEEEeCCHH-----------HHHHHHHHHHHhCCCceEEEEC------CHHHHHHHHHhcccccCCCCCEEEEecCC
Confidence 356777776643 3556777777776544566654 3456666665 24678776433
Q ss_pred CCCCcHHHHHHHH-----cCCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHH
Q 036539 635 YEAFGLTVIEAMN-----CGLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIA 686 (749)
Q Consensus 635 ~E~fGLtvlEAMa-----~GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~ 686 (749)
.+.-|+.+++.+. ..+|+|. |.... ..+.+..|..+++..|-+.+++.+++.
T Consensus 70 ~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~L~~~~~ 130 (143)
T 2qvg_A 70 PKMNGIEFLKELRDDSSFTDIEVFVLTAAYTSKDKLAFESLNIRGHLIKPLDYGEAIKLFW 130 (143)
T ss_dssp TTSCHHHHHHHHTTSGGGTTCEEEEEESCCCHHHHHHHTTTTCCEEEESSCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHcCccccCCcEEEEeCCCCHHHHHHHHhcCCCeEEECCCCHHHHHHHHH
Confidence 3446778888775 4678776 33332 244556788999999999999988864
No 81
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=51.84 E-value=73 Score=32.21 Aligned_cols=38 Identities=24% Similarity=0.208 Sum_probs=27.4
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPD 303 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~ 303 (749)
|||++-...|+.. ..+. .|++.|++.| +|. |+++....
T Consensus 2 M~ILlTNDDGi~a--------------pGi~--------aL~~~l~~~g-~V~----VVAP~~~~ 39 (251)
T 2phj_A 2 PTFLLVNDDGYFS--------------PGIN--------ALREALKSLG-RVV----VVAPDRNL 39 (251)
T ss_dssp CEEEEECSSCTTC--------------HHHH--------HHHHHHTTTS-EEE----EEEESSCC
T ss_pred CEEEEECCCCCCC--------------HHHH--------HHHHHHHhcC-CEE----EEecCCCc
Confidence 8999999888733 2355 5566678888 888 99887544
No 82
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=51.63 E-value=1.2e+02 Score=26.17 Aligned_cols=107 Identities=10% Similarity=0.177 Sum_probs=69.0
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH---ccCcEEEECC-CCCCCc
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA---DTKGAFVQPA-LYEAFG 639 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la---~aadvfV~PS-~~E~fG 639 (749)
.+++|+.+.+. ..+.+....++.+. .|.... +..+....+. ...|++++=. ..+.-|
T Consensus 4 ~~ilivdd~~~-----------~~~~l~~~l~~~g~--~v~~~~------~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g 64 (143)
T 3jte_A 4 AKILVIDDEST-----------ILQNIKFLLEIDGN--EVLTAS------SSTEGLRIFTENCNSIDVVITDMKMPKLSG 64 (143)
T ss_dssp CEEEEECSCHH-----------HHHHHHHHHHHTTC--EEEEES------SHHHHHHHHHHTTTTCCEEEEESCCSSSCH
T ss_pred CEEEEEcCCHH-----------HHHHHHHHHHhCCc--eEEEeC------CHHHHHHHHHhCCCCCCEEEEeCCCCCCcH
Confidence 56777776543 35566777776653 344322 3455666665 2367777643 345567
Q ss_pred HHHHHHHHc---CCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 640 LTVIEAMNC---GLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 640 LtvlEAMa~---GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
+.+++.+.. .+|+|. |.... ..+.+..|..+|+..|.+.+++..+|..++
T Consensus 65 ~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~l~~~~ 121 (143)
T 3jte_A 65 MDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFEYLRKPVTAQDLSIAINNAI 121 (143)
T ss_dssp HHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHhCcceeEeCCCCHHHHHHHHHHHH
Confidence 777766643 678876 44333 344567788999999999999999997665
No 83
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=51.56 E-value=1.2e+02 Score=26.20 Aligned_cols=107 Identities=13% Similarity=0.109 Sum_probs=70.0
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc--cCcEEEECCCC-C-CCc
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD--TKGAFVQPALY-E-AFG 639 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~--aadvfV~PS~~-E-~fG 639 (749)
.+++|+.+.+. ..+.+....++.|. .|... .+..+....+.. ..|++++=... + .-|
T Consensus 6 ~~ilivdd~~~-----------~~~~l~~~L~~~g~--~v~~~------~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g 66 (140)
T 3h5i_A 6 KKILIVEDSKF-----------QAKTIANILNKYGY--TVEIA------LTGEAAVEKVSGGWYPDLILMDIELGEGMDG 66 (140)
T ss_dssp CEEEEECSCHH-----------HHHHHHHHHHHTTC--EEEEE------SSHHHHHHHHHTTCCCSEEEEESSCSSSCCH
T ss_pred cEEEEEeCCHH-----------HHHHHHHHHHHcCC--EEEEe------cChHHHHHHHhcCCCCCEEEEeccCCCCCCH
Confidence 57778876543 35566777777653 34433 234566666643 35887765432 3 567
Q ss_pred HHHHHHHH--cCCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 640 LTVIEAMN--CGLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 640 LtvlEAMa--~GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
+.+++.+. ..+|+|. |.... ..+.+..|..+|+..|.+.+++..+|..++
T Consensus 67 ~~~~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l 122 (140)
T 3h5i_A 67 VQTALAIQQISELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSATEQVLITIVEMAL 122 (140)
T ss_dssp HHHHHHHHHHCCCCEEEEESSSSCCCCGGGGGSCEEEEEETTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCEEEEECCCCHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHHHH
Confidence 77776665 4788887 43332 334556788999999999999999997665
No 84
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=49.20 E-value=1.2e+02 Score=25.79 Aligned_cols=110 Identities=10% Similarity=0.099 Sum_probs=68.8
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHH-cCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECCC-CCCCc
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEK-YQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPAL-YEAFG 639 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~-~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS~-~E~fG 639 (749)
..+++|+.+.+. ....+....++ .|. ..|.... +..+....+. ...|++++-.. .+.-|
T Consensus 8 ~~~iLivdd~~~-----------~~~~l~~~L~~~~~~-~~v~~~~------~~~~a~~~l~~~~~dlii~d~~l~~~~g 69 (143)
T 3cnb_A 8 DFSILIIEDDKE-----------FADMLTQFLENLFPY-AKIKIAY------NPFDAGDLLHTVKPDVVMLDLMMVGMDG 69 (143)
T ss_dssp -CEEEEECSCHH-----------HHHHHHHHHHHHCTT-CEEEEEC------SHHHHHHHHHHTCCSEEEEETTCTTSCH
T ss_pred CceEEEEECCHH-----------HHHHHHHHHHhccCc-cEEEEEC------CHHHHHHHHHhcCCCEEEEecccCCCcH
Confidence 467888876643 34556666666 443 1144433 2345555544 23577776443 34567
Q ss_pred HHHHHHHHc-----CCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHHH
Q 036539 640 LTVIEAMNC-----GLPTFA-TNQGGP---AEIIVDGVSGFHIDPYNGDESSDKIADFFE 690 (749)
Q Consensus 640 LtvlEAMa~-----GlPVVa-t~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~ 690 (749)
+.+++.+.. .+|+|. |..... .+.+..|..+++..|.+.+++.++|..++.
T Consensus 70 ~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~ 129 (143)
T 3cnb_A 70 FSICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAETCFGKPLNFTLLEKTIKQLVE 129 (143)
T ss_dssp HHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 788887765 578776 443332 344567889999999999999999976653
No 85
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=49.05 E-value=1.4e+02 Score=26.17 Aligned_cols=110 Identities=6% Similarity=0.020 Sum_probs=68.5
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc--------cCcEEEECCC
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD--------TKGAFVQPAL 634 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~--------aadvfV~PS~ 634 (749)
..+++|+.+.+. ..+.+....++.+....|.... +..+....+.. ..|++++=-.
T Consensus 8 ~~~ILivdd~~~-----------~~~~l~~~L~~~~~~~~v~~~~------~~~~al~~l~~~~~~~~~~~~dlillD~~ 70 (149)
T 1i3c_A 8 PKVILLVEDSKA-----------DSRLVQEVLKTSTIDHELIILR------DGLAAMAFLQQQGEYENSPRPNLILLDLN 70 (149)
T ss_dssp CEEEEEECCCHH-----------HHHHHHHHHHSCCSCEEEEEEC------SHHHHHHHHTTCGGGTTCCCCSEEEECSC
T ss_pred CCeEEEEECCHH-----------HHHHHHHHHHhcCCCccEEEeC------CHHHHHHHHHhccccccCCCCCEEEEeCC
Confidence 467788876643 3455666666554322343332 34566666652 3688776433
Q ss_pred -CCCCcHHHHHHHHc-----CCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 635 -YEAFGLTVIEAMNC-----GLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 635 -~E~fGLtvlEAMa~-----GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
...-|+.+++.+.. .+|+|. |.... ..+.+..|..||+..|.+.+++.++|..+.
T Consensus 71 lp~~~g~~l~~~l~~~~~~~~~piiils~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~ 135 (149)
T 1i3c_A 71 LPKKDGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRNLKDLFKMVQGIE 135 (149)
T ss_dssp CSSSCHHHHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHhCcCcCCCeEEEEECCCChHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHH
Confidence 34457778877753 568776 44333 234456788999999999999999986554
No 86
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=48.91 E-value=1.3e+02 Score=25.81 Aligned_cols=108 Identities=12% Similarity=0.154 Sum_probs=69.7
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCC-CCCCcH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPAL-YEAFGL 640 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~-~E~fGL 640 (749)
..+++|+.+.+. ..+.+....+..|. .|.... +..+....+.. ..|++++=.. .+.-|+
T Consensus 7 ~~~iLivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~a~~~l~~~~~dlii~d~~l~~~~g~ 67 (142)
T 3cg4_A 7 KGDVMIVDDDAH-----------VRIAVKTILSDAGF--HIISAD------SGGQCIDLLKKGFSGVVLLDIMMPGMDGW 67 (142)
T ss_dssp CCEEEEECSCHH-----------HHHHHHHHHHHTTC--EEEEES------SHHHHHHHHHTCCCEEEEEESCCSSSCHH
T ss_pred CCeEEEEcCCHH-----------HHHHHHHHHHHCCe--EEEEeC------CHHHHHHHHHhcCCCEEEEeCCCCCCCHH
Confidence 467888876643 35566667776653 344332 34566666553 2477665433 345678
Q ss_pred HHHHHHHc-----CCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 641 TVIEAMNC-----GLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 641 tvlEAMa~-----GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.+++.+.. .+|+|. |.... ..+.+..|..+++..|.+.+++.++|..++
T Consensus 68 ~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~ 125 (142)
T 3cg4_A 68 DTIRAILDNSLEQGIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFDNEDLIEKTTFFM 125 (142)
T ss_dssp HHHHHHHHTTCCTTEEEEEEECTTCCCCSSTTGGGGEEEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccCCCCEEEEECCCCHHHHHHHHhcCccEEEeCCCCHHHHHHHHHHHH
Confidence 88887764 467776 33332 344556788899999999999999997665
No 87
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=48.36 E-value=8.2 Score=39.36 Aligned_cols=19 Identities=21% Similarity=0.323 Sum_probs=16.4
Q ss_pred HHHHHHHHcCCcccceEEEEeCC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
.|++.|.++||+|+ +++|.
T Consensus 15 ~L~~~L~~~G~~V~----~l~R~ 33 (298)
T 4b4o_A 15 ALTQLLNARGHEVT----LVSRK 33 (298)
T ss_dssp HHHHHHHHTTCEEE----EEESS
T ss_pred HHHHHHHHCCCEEE----EEECC
Confidence 67788999999999 88875
No 88
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=46.77 E-value=1.3e+02 Score=30.30 Aligned_cols=38 Identities=13% Similarity=0.123 Sum_probs=26.7
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPD 303 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~ 303 (749)
|||++-...|+..+ .+. .|++.|++.| +|. |+++....
T Consensus 1 M~ILlTNDDGi~ap--------------Gi~--------aL~~~l~~~g-~V~----VVAP~~~~ 38 (247)
T 1j9j_A 1 MRILVTNDDGIQSK--------------GII--------VLAELLSEEH-EVF----VVAPDKER 38 (247)
T ss_dssp CEEEEECSSCTTCH--------------HHH--------HHHHHHTTTS-EEE----EEEESSCC
T ss_pred CeEEEEcCCCCCcH--------------hHH--------HHHHHHHhCC-CEE----EEecCCCC
Confidence 78999988887432 244 5556677778 788 99887544
No 89
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=45.95 E-value=1.7e+02 Score=26.39 Aligned_cols=14 Identities=7% Similarity=0.154 Sum_probs=10.1
Q ss_pred HHHHHHHHcCCccc
Q 036539 278 ELLLRIKQQGLYIK 291 (749)
Q Consensus 278 eLa~~L~~~G~eV~ 291 (749)
.+++.|.+.|++|.
T Consensus 40 ~~~~~l~~~G~~v~ 53 (144)
T 2d59_A 40 IVMKYLLEHGYDVY 53 (144)
T ss_dssp HHHHHHHHTTCEEE
T ss_pred HHHHHHHHCCCEEE
Confidence 45567888999755
No 90
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=45.90 E-value=7.7 Score=39.12 Aligned_cols=35 Identities=23% Similarity=0.236 Sum_probs=24.8
Q ss_pred CceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCC
Q 036539 236 PILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 236 pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
+|+|||++... |+. |. .+++.|.++||+|. ++++.
T Consensus 3 ~m~~~ilVtGa-G~i-----------G~--------------~l~~~L~~~g~~V~----~~~r~ 37 (286)
T 3ius_A 3 AMTGTLLSFGH-GYT-----------AR--------------VLSRALAPQGWRII----GTSRN 37 (286)
T ss_dssp --CCEEEEETC-CHH-----------HH--------------HHHHHHGGGTCEEE----EEESC
T ss_pred CCcCcEEEECC-cHH-----------HH--------------HHHHHHHHCCCEEE----EEEcC
Confidence 68899998864 542 22 66778889999998 88875
No 91
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=45.36 E-value=1.2e+02 Score=27.35 Aligned_cols=19 Identities=16% Similarity=0.163 Sum_probs=14.0
Q ss_pred HHHHHHHHcCCcccceEEEEeCC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
.+++.|.+.|++|. .+.+.
T Consensus 32 ~~~~~L~~~G~~V~----~vnp~ 50 (138)
T 1y81_A 32 IILKDLLSKGFEVL----PVNPN 50 (138)
T ss_dssp HHHHHHHHTTCEEE----EECTT
T ss_pred HHHHHHHHCCCEEE----EeCCC
Confidence 56677889999866 66654
No 92
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=44.41 E-value=96 Score=31.17 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=26.8
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPD 303 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~ 303 (749)
|||++-...|+.. ..+. .|++.|++.| +|. |+++....
T Consensus 1 M~ILlTNDDGi~a--------------pGi~--------aL~~~l~~~g-~V~----VVAP~~~~ 38 (244)
T 2e6c_A 1 MRILVTNDDGIYS--------------PGLW--------ALAEAASQFG-EVF----VAAPDTEQ 38 (244)
T ss_dssp CEEEEECSSCTTC--------------HHHH--------HHHHHHTTTS-EEE----EEEECSSC
T ss_pred CeEEEEcCCCCCc--------------HhHH--------HHHHHHHhCC-CEE----EEecCCCC
Confidence 7899998888743 2345 5566677778 888 99887544
No 93
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=44.14 E-value=1.1e+02 Score=27.77 Aligned_cols=20 Identities=15% Similarity=0.235 Sum_probs=14.4
Q ss_pred HHHHHHHHcCCcccceEEEEeCCC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRLI 301 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~~ 301 (749)
.+++.|.+.|++|. .+.+..
T Consensus 31 ~~~~~L~~~G~~v~----~vnp~~ 50 (145)
T 2duw_A 31 RVMKYLLDQGYHVI----PVSPKV 50 (145)
T ss_dssp HHHHHHHHHTCCEE----EECSSS
T ss_pred HHHHHHHHCCCEEE----EeCCcc
Confidence 56667888999876 666653
No 94
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=44.11 E-value=96 Score=27.19 Aligned_cols=75 Identities=11% Similarity=0.089 Sum_probs=49.1
Q ss_pred hHHHHHHHHc-cCcEEEECCC-CCCCcHHHHHHHHc---CCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHH
Q 036539 615 NGELYRCIAD-TKGAFVQPAL-YEAFGLTVIEAMNC---GLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKI 685 (749)
Q Consensus 615 ~~el~~~la~-aadvfV~PS~-~E~fGLtvlEAMa~---GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI 685 (749)
..+..+.+.. ..|++++=.. .+.-|+.+++.+.. .+|+|. |.... ..+.+..|..+|+..|.+.+++.++|
T Consensus 55 ~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i 134 (150)
T 4e7p_A 55 GQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTL 134 (150)
T ss_dssp HHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHHH
T ss_pred HHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHH
Confidence 4455555542 2466665433 44567777776654 577776 33332 34456678899999999999999999
Q ss_pred HHHH
Q 036539 686 ADFF 689 (749)
Q Consensus 686 ~~~l 689 (749)
..++
T Consensus 135 ~~~~ 138 (150)
T 4e7p_A 135 HTVL 138 (150)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7655
No 95
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=43.14 E-value=1.1e+02 Score=27.54 Aligned_cols=19 Identities=16% Similarity=0.134 Sum_probs=13.4
Q ss_pred HHHHHHHHcCCcccceEEEEeCC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
.+++.|.+.|++|. -+++.
T Consensus 31 ~~~~~l~~~G~~v~----~vnp~ 49 (140)
T 1iuk_A 31 YVPRYLREQGYRVL----PVNPR 49 (140)
T ss_dssp HHHHHHHHTTCEEE----EECGG
T ss_pred HHHHHHHHCCCEEE----EeCCC
Confidence 55667889999765 55554
No 96
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=42.64 E-value=1.4e+02 Score=25.03 Aligned_cols=108 Identities=14% Similarity=0.205 Sum_probs=66.6
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCC-CCCCcH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPAL-YEAFGL 640 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~-~E~fGL 640 (749)
+.+++|+.+.+. ..+.+....+..|. .+.... +..+....+.. ..|++++=.. ...-|+
T Consensus 3 ~~~ilivdd~~~-----------~~~~l~~~l~~~~~--~v~~~~------~~~~~~~~~~~~~~dlvi~D~~l~~~~g~ 63 (126)
T 1dbw_A 3 DYTVHIVDDEEP-----------VRKSLAFMLTMNGF--AVKMHQ------SAEAFLAFAPDVRNGVLVTDLRMPDMSGV 63 (126)
T ss_dssp CCEEEEEESSHH-----------HHHHHHHHHHHTTC--EEEEES------CHHHHHHHGGGCCSEEEEEECCSTTSCHH
T ss_pred CCEEEEEcCCHH-----------HHHHHHHHHHhCCc--EEEEeC------CHHHHHHHHhcCCCCEEEEECCCCCCCHH
Confidence 356777776643 34556666666543 344332 24455555543 2577765332 344577
Q ss_pred HHHHHHH---cCCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 641 TVIEAMN---CGLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 641 tvlEAMa---~GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.+++.+. ..+|+|. |.... ..+.+..|..||+..|.+.+++.++|...+
T Consensus 64 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~~~ 119 (126)
T 1dbw_A 64 ELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIERAS 119 (126)
T ss_dssp HHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHhCHHHheeCCCCHHHHHHHHHHHH
Confidence 7777664 3678876 44433 234456788999999999999999986543
No 97
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=42.44 E-value=1.4e+02 Score=26.10 Aligned_cols=111 Identities=10% Similarity=0.011 Sum_probs=65.9
Q ss_pred CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECC-CCCCCc
Q 036539 562 NLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPA-LYEAFG 639 (749)
Q Consensus 562 ~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS-~~E~fG 639 (749)
...+++|+.+.+. ..+.+.....+.+....|.... +..+..+.+. ...|++++=. ..+.-|
T Consensus 14 ~~~~iLivdd~~~-----------~~~~l~~~L~~~~~~~~v~~~~------~~~~a~~~l~~~~~dlii~d~~l~~~~g 76 (152)
T 3eul_A 14 EKVRVVVGDDHPL-----------FREGVVRALSLSGSVNVVGEAD------DGAAALELIKAHLPDVALLDYRMPGMDG 76 (152)
T ss_dssp CCEEEEEECSSHH-----------HHHHHHHHHHHHSSEEEEEEES------SHHHHHHHHHHHCCSEEEEETTCSSSCH
T ss_pred ceEEEEEEcCCHH-----------HHHHHHHHHhhCCCeEEEEEeC------CHHHHHHHHHhcCCCEEEEeCCCCCCCH
Confidence 3467777776543 2455666666654211122221 2334444443 2357766543 345567
Q ss_pred HHHHHHHHc---CCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 640 LTVIEAMNC---GLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 640 LtvlEAMa~---GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
+.+++.+.. .+|+|. |.... ..+.+..|..||+..|.+.+++.++|..++
T Consensus 77 ~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~ 133 (152)
T 3eul_A 77 AQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVLDCA 133 (152)
T ss_dssp HHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHH
Confidence 777776653 567776 44333 234556788999999999999999997665
No 98
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=41.91 E-value=1.5e+02 Score=25.41 Aligned_cols=110 Identities=5% Similarity=-0.042 Sum_probs=67.5
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH------ccCcEEEECCC-C
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA------DTKGAFVQPAL-Y 635 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la------~aadvfV~PS~-~ 635 (749)
..+++|+.+.+. ....+..+.+..+....|.... +..+....+. ...|++++=.. .
T Consensus 9 ~~~iLivdd~~~-----------~~~~l~~~l~~~~~~~~v~~~~------~~~~a~~~l~~~~~~~~~~dlvi~D~~l~ 71 (146)
T 3ilh_A 9 IDSVLLIDDDDI-----------VNFLNTTIIRMTHRVEEIQSVT------SGNAAINKLNELYAAGRWPSIICIDINMP 71 (146)
T ss_dssp EEEEEEECSCHH-----------HHHHHHHHHHTTCCEEEEEEES------SHHHHHHHHHHHHTSSCCCSEEEEESSCS
T ss_pred cceEEEEeCCHH-----------HHHHHHHHHHhcCCCeeeeecC------CHHHHHHHHHHhhccCCCCCEEEEcCCCC
Confidence 467788876643 2445566666554322344332 3455556554 23688776433 4
Q ss_pred CCCcHHHHHHHHc-------CCcEEEc-Cccc---cccccccC-ceEEEECCCCHHHHHHHHHHHH
Q 036539 636 EAFGLTVIEAMNC-------GLPTFAT-NQGG---PAEIIVDG-VSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 636 E~fGLtvlEAMa~-------GlPVVat-~~GG---~~EiI~dg-~~G~lv~p~d~e~lA~aI~~~l 689 (749)
+.-|+.+++.+.. .+|+|.. .... ..+....| ..+|+..|-+.+++.++|.+..
T Consensus 72 ~~~g~~~~~~l~~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~~l~KP~~~~~L~~~i~~~~ 137 (146)
T 3ilh_A 72 GINGWELIDLFKQHFQPMKNKSIVCLLSSSLDPRDQAKAEASDWVDYYVSKPLTANALNNLYNKVL 137 (146)
T ss_dssp SSCHHHHHHHHHHHCGGGTTTCEEEEECSSCCHHHHHHHHHCSSCCEEECSSCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhhhccCCCeEEEEeCCCChHHHHHHHhcCCcceeeeCCCCHHHHHHHHHHHH
Confidence 5567888877654 6777763 3332 23334566 8899999999999999996543
No 99
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=41.72 E-value=2.2e+02 Score=28.65 Aligned_cols=113 Identities=12% Similarity=0.046 Sum_probs=60.5
Q ss_pred HHHHHHHHHHhHccCCCe-EEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHcc
Q 036539 547 LTGLTEWYGKNKRLRNLV-NLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADT 625 (749)
Q Consensus 547 l~~LieA~~~l~~~~~~v-~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~a 625 (749)
+..-++.+.++. |+. ++.++++... .......+.+++.++++|+ .+....... .-...+....+...
T Consensus 126 ~~~~l~l~~~l~---P~~k~vgvi~~~~~------~~s~~~~~~~~~~~~~~g~--~~v~~~~~~-~~~~~~~~~~l~~~ 193 (302)
T 3lkv_A 126 VEQHVELIKEIL---PNVKSIGVVYNPGE------ANAVSLMELLKLSAAKHGI--KLVEATALK-SADVQSATQAIAEK 193 (302)
T ss_dssp HHHHHHHHHHHS---TTCCEEEEEECTTC------HHHHHHHHHHHHHHHHTTC--EEEEEECSS-GGGHHHHHHHHHTT
T ss_pred HHHHHHHHHHhC---CCCCEEEEEeCCCc------ccHHHHHHHHHHHHHHcCC--EEEEEecCC-hHHHHHHHHhccCC
Confidence 455556665543 333 5666665433 2233456678888888876 344433222 22233334444445
Q ss_pred CcEEEECCC---CCCCcHHHHHHHHcCCcEEEcCccccccccccCce-EEEECC
Q 036539 626 KGAFVQPAL---YEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVS-GFHIDP 675 (749)
Q Consensus 626 advfV~PS~---~E~fGLtvlEAMa~GlPVVat~~GG~~EiI~dg~~-G~lv~p 675 (749)
.|++..|.. ..+......-+..+++||++.... .+.+|.- |+.+++
T Consensus 194 ~d~i~~~~d~~~~~~~~~i~~~~~~~~iPv~~~~~~----~v~~G~l~~~~~~~ 243 (302)
T 3lkv_A 194 SDVIYALIDNTVASAIEGMIVAANQAKTPVFGAATS----YVERGAIASLGFDY 243 (302)
T ss_dssp CSEEEECSCHHHHHTHHHHHHHHHHTTCCEEESSHH----HHHTTCSEEEECCH
T ss_pred eeEEEEeCCcchhhHHHHHHHHHhhcCCceeecccc----cccCCceEEEecCH
Confidence 888887754 122333345567889999987543 3444443 455443
No 100
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=41.09 E-value=1.7e+02 Score=25.01 Aligned_cols=75 Identities=9% Similarity=0.112 Sum_probs=45.5
Q ss_pred hHHHHHHHH-ccCcEEEECCC-CCCCcHHHHHHHH-----cCCcEEE-cCcc---ccccccccCceEEEECCCCHHHHHH
Q 036539 615 NGELYRCIA-DTKGAFVQPAL-YEAFGLTVIEAMN-----CGLPTFA-TNQG---GPAEIIVDGVSGFHIDPYNGDESSD 683 (749)
Q Consensus 615 ~~el~~~la-~aadvfV~PS~-~E~fGLtvlEAMa-----~GlPVVa-t~~G---G~~EiI~dg~~G~lv~p~d~e~lA~ 683 (749)
..+..+.+. ...|++++=.. .+.-|+.+++.+. ..+|+|. |... ...+.+..|..+|+..|.+.+++.+
T Consensus 35 ~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~ 114 (140)
T 3n53_A 35 EKEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGADDYLTKPFNRNDLLS 114 (140)
T ss_dssp HHHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC----CTTTTTTCCCSEEEESSCCHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecCCCHHHHHHHHhcCCCeeeeCCCCHHHHHH
Confidence 345554443 23577766433 3445666777665 5678877 3332 2344566788999999999999999
Q ss_pred HHHHHH
Q 036539 684 KIADFF 689 (749)
Q Consensus 684 aI~~~l 689 (749)
+|..++
T Consensus 115 ~i~~~~ 120 (140)
T 3n53_A 115 RIEIHL 120 (140)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 997655
No 101
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=40.83 E-value=1.6e+02 Score=30.13 Aligned_cols=38 Identities=16% Similarity=0.182 Sum_probs=26.9
Q ss_pred eEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCCCCC
Q 036539 239 FNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRLIPD 303 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~~p~ 303 (749)
|||++-...|+..+ .+. .|++.|++.| +|. |+++....
T Consensus 1 M~ILlTNDDGi~Ap--------------Gi~--------aL~~aL~~~g-~V~----VVAP~~~q 38 (280)
T 1l5x_A 1 MKILVTNDDGVHSP--------------GLR--------LLYQFALSLG-DVD----VVAPESPK 38 (280)
T ss_dssp CEEEEECSSCTTCH--------------HHH--------HHHHHHGGGS-EEE----EEEESSCT
T ss_pred CeEEEEcCCCCCcH--------------hHH--------HHHHHHHhCC-CEE----EEecCCCC
Confidence 78999988887432 244 5556677778 888 99887544
No 102
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=40.62 E-value=1.6e+02 Score=24.65 Aligned_cols=106 Identities=13% Similarity=0.172 Sum_probs=66.1
Q ss_pred EEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCC-CCCCcHHH
Q 036539 565 NLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPAL-YEAFGLTV 642 (749)
Q Consensus 565 ~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~-~E~fGLtv 642 (749)
+++|+.+.+. ..+.+....++.|. .|.... +..+..+.+.. ..|++++=.. .+.-|+.+
T Consensus 4 ~ILivdd~~~-----------~~~~l~~~l~~~g~--~v~~~~------~~~~al~~l~~~~~dlvllD~~~p~~~g~~~ 64 (122)
T 3gl9_A 4 KVLLVDDSAV-----------LRKIVSFNLKKEGY--EVIEAE------NGQIALEKLSEFTPDLIVLXIMMPVMDGFTV 64 (122)
T ss_dssp EEEEECSCHH-----------HHHHHHHHHHHTTC--EEEEES------SHHHHHHHHTTBCCSEEEECSCCSSSCHHHH
T ss_pred eEEEEeCCHH-----------HHHHHHHHHHHCCc--EEEEeC------CHHHHHHHHHhcCCCEEEEeccCCCCcHHHH
Confidence 5666665433 24456666666553 344322 34555665552 3577776432 45568888
Q ss_pred HHHHH-----cCCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 643 IEAMN-----CGLPTFA-TNQGGP---AEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 643 lEAMa-----~GlPVVa-t~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
++.+. ..+|+|. |..+.. .+.+..|..+|+..|.+++++.++|..++
T Consensus 65 ~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~~~i~~~l 120 (122)
T 3gl9_A 65 LKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKPFSPSQFIEEVKHLL 120 (122)
T ss_dssp HHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhhhccCCCCHHHHHHHHHHHh
Confidence 88874 3578876 444433 33446788999999999999999986543
No 103
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=40.39 E-value=1.3e+02 Score=24.32 Aligned_cols=104 Identities=5% Similarity=0.063 Sum_probs=63.3
Q ss_pred EEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCC-CCCCcHHH
Q 036539 565 NLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPAL-YEAFGLTV 642 (749)
Q Consensus 565 ~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~-~E~fGLtv 642 (749)
+++|+.+.+. ..+.+.+..+..|. +|.... +..+....+.. ..|++++-.. .+.-|+.+
T Consensus 3 ~iliv~~~~~-----------~~~~l~~~l~~~g~--~v~~~~------~~~~~~~~l~~~~~dlii~d~~~~~~~~~~~ 63 (119)
T 2j48_A 3 HILLLEEEDE-----------AATVVCEMLTAAGF--KVIWLV------DGSTALDQLDLLQPIVILMAWPPPDQSCLLL 63 (119)
T ss_dssp EEEEECCCHH-----------HHHHHHHHHHHTTC--EEEEES------CHHHHHHHHHHHCCSEEEEECSTTCCTHHHH
T ss_pred EEEEEeCCHH-----------HHHHHHHHHHhCCc--EEEEec------CHHHHHHHHHhcCCCEEEEecCCCCCCHHHH
Confidence 5666665533 34556666666553 344432 23444444432 3577665433 34567788
Q ss_pred HHHHH-----cCCcEEE-cCccccccccccCceEEEECCCCHHHHHHHHHH
Q 036539 643 IEAMN-----CGLPTFA-TNQGGPAEIIVDGVSGFHIDPYNGDESSDKIAD 687 (749)
Q Consensus 643 lEAMa-----~GlPVVa-t~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ 687 (749)
++.+. ..+|+|. |......+....|..+++..|.+.+++.++|..
T Consensus 64 ~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~l~~ 114 (119)
T 2j48_A 64 LQHLREHQADPHPPLVLFLGEPPVDPLLTAQASAILSKPLDPQLLLTTLQG 114 (119)
T ss_dssp HHHHHHTCCCSSCCCEEEESSCCSSHHHHHHCSEECSSCSTTHHHHHHHHT
T ss_pred HHHHHhccccCCCCEEEEeCCCCchhhhhcCHHHhccCCCCHHHHHHHHHH
Confidence 88775 4678776 433332255667788999999999999888843
No 104
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=38.23 E-value=2e+02 Score=25.01 Aligned_cols=106 Identities=13% Similarity=0.133 Sum_probs=64.9
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHcc-C-cEEEECC-CCCCCcH
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADT-K-GAFVQPA-LYEAFGL 640 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~a-a-dvfV~PS-~~E~fGL 640 (749)
.+++|+.+.+. ..+.+....+. + -.|... .+..+....+... . |++++=. ..+.-|+
T Consensus 5 ~~ILivdd~~~-----------~~~~l~~~L~~-~--~~v~~~------~~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~ 64 (151)
T 3kcn_A 5 ERILLVDDDYS-----------LLNTLKRNLSF-D--FEVTTC------ESGPEALACIKKSDPFSVIMVDMRMPGMEGT 64 (151)
T ss_dssp CEEEEECSCHH-----------HHHHHHHHHTT-T--SEEEEE------SSHHHHHHHHHHSCCCSEEEEESCCSSSCHH
T ss_pred CeEEEEeCCHH-----------HHHHHHHHhcc-C--ceEEEe------CCHHHHHHHHHcCCCCCEEEEeCCCCCCcHH
Confidence 57778876543 23344444432 2 234433 2355666666543 3 7877643 3455677
Q ss_pred HHHHHHH---cCCcEEE-cCccc---cccccccC-ceEEEECCCCHHHHHHHHHHHH
Q 036539 641 TVIEAMN---CGLPTFA-TNQGG---PAEIIVDG-VSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 641 tvlEAMa---~GlPVVa-t~~GG---~~EiI~dg-~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.+++.+. ..+|+|. |.... ..+.+..| ..+|+..|-+.+++.++|..++
T Consensus 65 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~L~~~i~~~l 121 (151)
T 3kcn_A 65 EVIQKARLISPNSVYLMLTGNQDLTTAMEAVNEGQVFRFLNKPCQMSDIKAAINAGI 121 (151)
T ss_dssp HHHHHHHHHCSSCEEEEEECGGGHHHHHHHHHHTCCSEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcEEEEEECCCCHHHHHHHHHcCCeeEEEcCCCCHHHHHHHHHHHH
Confidence 7777654 3677776 43333 23445567 7899999999999999997765
No 105
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=38.18 E-value=1.8e+02 Score=24.33 Aligned_cols=109 Identities=14% Similarity=0.274 Sum_probs=67.5
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCC-CCCCcH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPAL-YEAFGL 640 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~-~E~fGL 640 (749)
..+++|+.+.+. ..+.+....+..|. ..+.... +..+....+.. ..|++++=.. ...-|+
T Consensus 4 ~~~ilivdd~~~-----------~~~~l~~~l~~~~~-~~v~~~~------~~~~a~~~~~~~~~dlvi~D~~l~~~~g~ 65 (128)
T 1jbe_A 4 ELKFLVVDDFST-----------MRRIVRNLLKELGF-NNVEEAE------DGVDALNKLQAGGYGFVISDWNMPNMDGL 65 (128)
T ss_dssp TCCEEEECSCHH-----------HHHHHHHHHHHTTC-CCEEEES------SHHHHHHHHTTCCCCEEEEESCCSSSCHH
T ss_pred ccEEEEECCCHH-----------HHHHHHHHHHHcCC-cEEEeeC------CHHHHHHHHHhcCCCEEEEeCCCCCCCHH
Confidence 356777766543 34556666666553 2344432 24455555542 2577765332 344678
Q ss_pred HHHHHHHc-----CCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 641 TVIEAMNC-----GLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 641 tvlEAMa~-----GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.+++.+.. .+|+|. |.... ..+.+..|..+|+..|.+.+++.++|...+
T Consensus 66 ~l~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~~ 123 (128)
T 1jbe_A 66 ELLKTIRAXXAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIF 123 (128)
T ss_dssp HHHHHHHC--CCTTCCEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccCCCcEEEEecCccHHHHHHHHHhCcCceeecCCCHHHHHHHHHHHH
Confidence 88888764 567776 44332 234456788999999999999999996654
No 106
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=37.19 E-value=89 Score=27.17 Aligned_cols=111 Identities=13% Similarity=0.159 Sum_probs=63.4
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH--ccCcEEEECCC-CCCCc
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA--DTKGAFVQPAL-YEAFG 639 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la--~aadvfV~PS~-~E~fG 639 (749)
..+++|+.+.+. ..+.+....++.|- -.|.... -..+.+..+.. ...|++++=.. .+.-|
T Consensus 20 ~~~ilivdd~~~-----------~~~~l~~~L~~~g~-~~v~~~~-----~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g 82 (146)
T 4dad_A 20 MINILVASEDAS-----------RLAHLARLVGDAGR-YRVTRTV-----GRAAQIVQRTDGLDAFDILMIDGAALDTAE 82 (146)
T ss_dssp GCEEEEECSCHH-----------HHHHHHHHHHHHCS-CEEEEEC-----CCHHHHTTCHHHHTTCSEEEEECTTCCHHH
T ss_pred CCeEEEEeCCHH-----------HHHHHHHHHhhCCC-eEEEEeC-----CHHHHHHHHHhcCCCCCEEEEeCCCCCccH
Confidence 356777765543 24455566666541 1232221 11223333332 34677776433 33346
Q ss_pred HHHHHHHHc---CCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHHH
Q 036539 640 LTVIEAMNC---GLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFFE 690 (749)
Q Consensus 640 LtvlEAMa~---GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~ 690 (749)
+.+++.+.. .+|+|. |.... ..+.+..|..+|+..|.+.+++..+|..++.
T Consensus 83 ~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~~ 140 (146)
T 4dad_A 83 LAAIEKLSRLHPGLTCLLVTTDASSQTLLDAMRAGVRDVLRWPLEPRALDDALKRAAA 140 (146)
T ss_dssp HHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHTTTEEEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHhCCceeEcCCCCHHHHHHHHHHHHh
Confidence 666665543 678876 43332 3345567889999999999999999976653
No 107
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=36.65 E-value=2e+02 Score=24.56 Aligned_cols=107 Identities=9% Similarity=0.025 Sum_probs=62.0
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECCC-CCCCcHH
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPAL-YEAFGLT 641 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS~-~E~fGLt 641 (749)
.+++|+.+.+. ....+....+..+ ..+.... +..+....+. ...|++++=.. ...-|+.
T Consensus 11 ~~iLivdd~~~-----------~~~~l~~~L~~~~--~~v~~~~------~~~~al~~l~~~~~dlvllD~~lp~~~g~~ 71 (140)
T 3c97_A 11 LSVLIAEDNDI-----------CRLVAAKALEKCT--NDITVVT------NGLQALQAYQNRQFDVIIMDIQMPVMDGLE 71 (140)
T ss_dssp CEEEEECCCHH-----------HHHHHHHHHTTTC--SEEEEES------SHHHHHHHHHHSCCSEEEECTTCCSSCHHH
T ss_pred ceEEEEcCCHH-----------HHHHHHHHHHHcC--CceEEEC------CHHHHHHHHhcCCCCEEEEeCCCCCCcHHH
Confidence 46777766543 2344555554433 2344432 2344444443 23578776433 2345777
Q ss_pred HHHHHH--------cCCcEEE-cCccccccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 642 VIEAMN--------CGLPTFA-TNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 642 vlEAMa--------~GlPVVa-t~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
+++.+. ..+|+++ |...........|..||+..|.+.+++.++|...+
T Consensus 72 ~~~~l~~~~~~~~~~~~~ii~~s~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~~ 128 (140)
T 3c97_A 72 AVSEIRNYERTHNTKRASIIAITADTIDDDRPGAELDEYVSKPLNPNQLRDVVLTCH 128 (140)
T ss_dssp HHHHHHHHHHHHTCCCCCCEEEESSCCSCCCCCSSCSEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhcCCCceEEEEEeCccchhHHHhCChhheEeCCCCHHHHHHHHHHHh
Confidence 777664 2567766 44333334445566899999999999999986543
No 108
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=35.72 E-value=31 Score=35.56 Aligned_cols=36 Identities=17% Similarity=0.203 Sum_probs=25.1
Q ss_pred eeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCccc
Q 036539 238 LFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIK 291 (749)
Q Consensus 238 ~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~ 291 (749)
.|||+||..| |. .++ ...+|.+...+.|.++||+|+
T Consensus 22 ~MKiLII~aH--P~---------~~S-------~n~aL~~~~~~~l~~~G~eV~ 57 (280)
T 4gi5_A 22 SMKVLLIYAH--PE---------PRS-------LNGALKNFAIRHLQQAGHEVQ 57 (280)
T ss_dssp CCEEEEEECC--SC---------TTS-------HHHHHHHHHHHHHHHTTCEEE
T ss_pred CCeEEEEEeC--CC---------Ccc-------HHHHHHHHHHHHHHHCCCeEE
Confidence 4899999755 32 233 234555677788999999998
No 109
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=35.58 E-value=2.1e+02 Score=24.46 Aligned_cols=107 Identities=18% Similarity=0.214 Sum_probs=67.1
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECCC-CCCCcHH
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPAL-YEAFGLT 641 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS~-~E~fGLt 641 (749)
.+++|+.+.+. ..+.+....++.|. .|.... +..+..+.+. ...|++++=.. .+.-|+.
T Consensus 5 ~~iLivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~al~~~~~~~~dlvl~D~~lp~~~g~~ 65 (136)
T 3t6k_A 5 HTLLIVDDDDT-----------VAEMLELVLRGAGY--EVRRAA------SGEEALQQIYKNLPDALICDVLLPGIDGYT 65 (136)
T ss_dssp CEEEEECSCHH-----------HHHHHHHHHHHTTC--EEEEES------SHHHHHHHHHHSCCSEEEEESCCSSSCHHH
T ss_pred CEEEEEeCCHH-----------HHHHHHHHHHHCCC--EEEEeC------CHHHHHHHHHhCCCCEEEEeCCCCCCCHHH
Confidence 46777766543 34556666666553 344322 2445555444 33577776432 3456788
Q ss_pred HHHHHHc-----CCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 642 VIEAMNC-----GLPTFA-TNQGGP---AEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 642 vlEAMa~-----GlPVVa-t~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
+++.+.. .+|+|. |..+.. .+.+..|..+|+..|.+.+++..+|..++
T Consensus 66 ~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~l 122 (136)
T 3t6k_A 66 LCKRVRQHPLTKTLPILMLTAQGDISAKIAGFEAGANDYLAKPFEPQELVYRVKNIL 122 (136)
T ss_dssp HHHHHHHSGGGTTCCEEEEECTTCHHHHHHHHHHTCSEEEETTCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcCCccEEEEecCCCHHHHHHHHhcCcceEEeCCCCHHHHHHHHHHHH
Confidence 8877753 578876 444332 33456788999999999999999997665
No 110
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=34.84 E-value=1.4e+02 Score=25.06 Aligned_cols=108 Identities=11% Similarity=0.088 Sum_probs=64.7
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCC-CCCCcH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPAL-YEAFGL 640 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~-~E~fGL 640 (749)
..+++|+.+.+. ..+.+.+..++.|. .+.... +..+..+.+.. ..|++++=.. .+.-|+
T Consensus 7 ~~~ilivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~a~~~l~~~~~dlvi~d~~l~~~~g~ 67 (130)
T 3eod_A 7 GKQILIVEDEQV-----------FRSLLDSWFSSLGA--TTVLAA------DGVDALELLGGFTPDLMICDIAMPRMNGL 67 (130)
T ss_dssp TCEEEEECSCHH-----------HHHHHHHHHHHTTC--EEEEES------CHHHHHHHHTTCCCSEEEECCC-----CH
T ss_pred CCeEEEEeCCHH-----------HHHHHHHHHHhCCc--eEEEeC------CHHHHHHHHhcCCCCEEEEecCCCCCCHH
Confidence 457888876643 35566677777653 344322 34566666643 2577776433 345677
Q ss_pred HHHHHHHc---CCcEEE-cCcccc---ccccccCceEEEECCC-CHHHHHHHHHHHH
Q 036539 641 TVIEAMNC---GLPTFA-TNQGGP---AEIIVDGVSGFHIDPY-NGDESSDKIADFF 689 (749)
Q Consensus 641 tvlEAMa~---GlPVVa-t~~GG~---~EiI~dg~~G~lv~p~-d~e~lA~aI~~~l 689 (749)
.+++.+.. .+|+|. |..... .+.+..|..+|+..|- +.+.+.++|...+
T Consensus 68 ~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~~l~~~i~~~l 124 (130)
T 3eod_A 68 KLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREMVFACL 124 (130)
T ss_dssp HHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCSEEEESCC---CHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHHHh
Confidence 77776653 578876 433332 3455678899999998 8899998886554
No 111
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=34.10 E-value=85 Score=31.32 Aligned_cols=18 Identities=22% Similarity=0.242 Sum_probs=12.6
Q ss_pred HHHHcCCcccceEEEEeCCC
Q 036539 282 RIKQQGLYIKPQIVVVTRLI 301 (749)
Q Consensus 282 ~L~~~G~eV~~~i~V~T~~~ 301 (749)
.++++|++|. |+++|...
T Consensus 26 ~~~~~G~~V~--vv~lT~G~ 43 (242)
T 2ixd_A 26 KYTKQGYEVG--ICDLTEAD 43 (242)
T ss_dssp HHHHTTCCEE--EEEEECCT
T ss_pred HHHHCCCeEE--EEEEcCCC
Confidence 4677999998 55666553
No 112
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=33.85 E-value=2.2e+02 Score=24.11 Aligned_cols=108 Identities=15% Similarity=0.143 Sum_probs=67.4
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEE-ecCccCcCChHHHHHHHH-ccCcEEEECCCC--CCC
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRW-IAAQSDRLRNGELYRCIA-DTKGAFVQPALY--EAF 638 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~f-lG~~~~~~~~~el~~~la-~aadvfV~PS~~--E~f 638 (749)
..+++|+.+.+. ..+.+....++.|. .+.. .. +..+....+. ...|++++-... +.-
T Consensus 9 ~~~iLivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~~------~~~~a~~~~~~~~~dlii~d~~~~~~~~ 69 (140)
T 3cg0_A 9 LPGVLIVEDGRL-----------AAATLRIQLESLGY--DVLGVFD------NGEEAVRCAPDLRPDIALVDIMLCGALD 69 (140)
T ss_dssp CCEEEEECCBHH-----------HHHHHHHHHHHHTC--EEEEEES------SHHHHHHHHHHHCCSEEEEESSCCSSSC
T ss_pred CceEEEEECCHH-----------HHHHHHHHHHHCCC--eeEEEEC------CHHHHHHHHHhCCCCEEEEecCCCCCCC
Confidence 467888877643 34556666666653 3432 22 2344444443 236787764432 345
Q ss_pred cHHHHHHHH--cCCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 639 GLTVIEAMN--CGLPTFA-TNQGGP---AEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 639 GLtvlEAMa--~GlPVVa-t~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
|+.+++.+. ..+|+|. |..... .+.+..|..+++..|.+.+++..+|..++
T Consensus 70 g~~~~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~ 126 (140)
T 3cg0_A 70 GVETAARLAAGCNLPIIFITSSQDVETFQRAKRVNPFGYLAKPVAADTLHRSIEMAI 126 (140)
T ss_dssp HHHHHHHHHHHSCCCEEEEECCCCHHHHHHHHTTCCSEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHhcCCCEEEeCCCCHHHHHHHHHHHH
Confidence 666666654 5788887 443332 34456788999999999999999997655
No 113
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=33.76 E-value=43 Score=31.94 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=22.8
Q ss_pred ceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHH-HHHcCCccc
Q 036539 237 ILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLR-IKQQGLYIK 291 (749)
Q Consensus 237 m~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~-L~~~G~eV~ 291 (749)
|+|||++|+ |. |..+|.. +.+.+.+++. +.++|++|.
T Consensus 1 mMmkilii~--gS---------~r~~g~t-------~~la~~i~~~~l~~~g~~v~ 38 (197)
T 2vzf_A 1 MTYSIVAIS--GS---------PSRNSTT-------AKLAEYALAHVLARSDSQGR 38 (197)
T ss_dssp CCEEEEEEE--CC---------SSTTCHH-------HHHHHHHHHHHHHHSSEEEE
T ss_pred CCceEEEEE--CC---------CCCCChH-------HHHHHHHHHHHHHHCCCeEE
Confidence 568999985 32 3224432 2233366677 788898887
No 114
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=33.43 E-value=2.2e+02 Score=23.96 Aligned_cols=107 Identities=12% Similarity=0.108 Sum_probs=63.1
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE-EecCccCcCChHHHHHHH-HccCcEEEECCC-CCCCcH
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR-WIAAQSDRLRNGELYRCI-ADTKGAFVQPAL-YEAFGL 640 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~-flG~~~~~~~~~el~~~l-a~aadvfV~PS~-~E~fGL 640 (749)
.+++|+.+.+. ..+.+....++.|. .+. ... +..+....+ ....|++++-.. .+.-|+
T Consensus 2 ~~ilivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~~------~~~~a~~~~~~~~~dlii~d~~l~~~~g~ 62 (134)
T 3f6c_A 2 LNAIIIDDHPL-----------AIAAIRNLLIKNDI--EILAELT------EGGSAVQRVETLKPDIVIIDVDIPGVNGI 62 (134)
T ss_dssp EEEEEECCCHH-----------HHHHHHHHHHHTTE--EEEEEES------SSTTHHHHHHHHCCSEEEEETTCSSSCHH
T ss_pred eEEEEEcCCHH-----------HHHHHHHHHhhCCc--EEEEEcC------CHHHHHHHHHhcCCCEEEEecCCCCCChH
Confidence 46667766543 35566666766652 232 222 112233322 234677776433 455677
Q ss_pred HHHHHHHc---CCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 641 TVIEAMNC---GLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 641 tvlEAMa~---GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.+++.+.. .+|+|. |.... ..+.+..|..|++..|.+.+++.++|..++
T Consensus 63 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~ 118 (134)
T 3f6c_A 63 QVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAK 118 (134)
T ss_dssp HHHHHHHHTTCCSEEEEEECC---CTHHHHHHTTCSEEEEGGGCTHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCeEEEEeCCCChHHHHHHHHhCCCEEEeCCCCHHHHHHHHHHHH
Confidence 77777653 567776 33332 334456788999999999999999997654
No 115
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=33.36 E-value=2.1e+02 Score=24.23 Aligned_cols=108 Identities=13% Similarity=0.098 Sum_probs=67.7
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECCC-CCCCcH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPAL-YEAFGL 640 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS~-~E~fGL 640 (749)
..+++|+.+... ..+.+.....+.+ ..+.... +..+..+.+. ...|++++=.. .+.-|+
T Consensus 7 ~~~ilivdd~~~-----------~~~~l~~~L~~~~--~~v~~~~------~~~~a~~~l~~~~~dlvi~d~~l~~~~g~ 67 (137)
T 3hdg_A 7 ALKILIVEDDTD-----------AREWLSTIISNHF--PEVWSAG------DGEEGERLFGLHAPDVIITDIRMPKLGGL 67 (137)
T ss_dssp CCCEEEECSCHH-----------HHHHHHHHHHTTC--SCEEEES------SHHHHHHHHHHHCCSEEEECSSCSSSCHH
T ss_pred ccEEEEEeCCHH-----------HHHHHHHHHHhcC--cEEEEEC------CHHHHHHHHhccCCCEEEEeCCCCCCCHH
Confidence 357788876643 2445666665532 2354443 2345554443 23677776543 455677
Q ss_pred HHHHHHHc---CCcEEEc-Cccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 641 TVIEAMNC---GLPTFAT-NQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 641 tvlEAMa~---GlPVVat-~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.+++.+.. .+|+|.. .... ..+.+..|..+|+..|-+.+++.++|.+++
T Consensus 68 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~ 123 (137)
T 3hdg_A 68 EMLDRIKAGGAKPYVIVISAFSEMKYFIKAIELGVHLFLPKPIEPGRLMETLEDFR 123 (137)
T ss_dssp HHHHHHHHTTCCCEEEECCCCCCHHHHHHHHHHCCSEECCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcEEEEecCcChHHHHHHHhCCcceeEcCCCCHHHHHHHHHHHH
Confidence 77776654 6788874 3332 234556788999999999999999997655
No 116
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=33.22 E-value=1.8e+02 Score=24.69 Aligned_cols=107 Identities=12% Similarity=0.158 Sum_probs=64.7
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCC-C-----C
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPAL-Y-----E 636 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~-~-----E 636 (749)
.+++|+.+.+. ..+.+....++.|. .|.... +..+....+.. ..|++++=.. . +
T Consensus 4 ~~ilivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~ 64 (140)
T 2qr3_A 4 GTIIIVDDNKG-----------VLTAVQLLLKNHFS--KVITLS------SPVSLSTVLREENPEVVLLDMNFTSGINNG 64 (140)
T ss_dssp CEEEEECSCHH-----------HHHHHHHHHTTTSS--EEEEEC------CHHHHHHHHHHSCEEEEEEETTTTC-----
T ss_pred ceEEEEeCCHH-----------HHHHHHHHHHhCCc--EEEEeC------CHHHHHHHHHcCCCCEEEEeCCcCCCCCCC
Confidence 56777776543 24455555555443 344332 24455555553 2467665433 2 4
Q ss_pred CCcHHHHHHHH---cCCcEEEc-Cccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 637 AFGLTVIEAMN---CGLPTFAT-NQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 637 ~fGLtvlEAMa---~GlPVVat-~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.-|+.+++.+. ..+|+|.. .... ..+.+..|..+++..|.+.+++.++|..++
T Consensus 65 ~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~l~~~~ 124 (140)
T 2qr3_A 65 NEGLFWLHEIKRQYRDLPVVLFTAYADIDLAVRGIKEGASDFVVKPWDNQKLLETLLNAA 124 (140)
T ss_dssp CCHHHHHHHHHHHCTTCCEEEEEEGGGHHHHHHHHHTTCCEEEEESCCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhhCcCCCEEEEECCCCHHHHHHHHHcCchheeeCCCCHHHHHHHHHHHH
Confidence 45777776664 46888873 3332 234456788999999999999999997654
No 117
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=32.76 E-value=3.6e+02 Score=26.39 Aligned_cols=140 Identities=12% Similarity=0.028 Sum_probs=76.2
Q ss_pred HHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcE
Q 036539 549 GLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGA 628 (749)
Q Consensus 549 ~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadv 628 (749)
.-...+..+.+. .++++++..... +++.+++++ +++.|... ....++ +. .+|+
T Consensus 42 va~~ka~~Ll~~--GA~VtVvap~~~-------------~~l~~l~~~----~~i~~i~~---~~~~~d----L~-~adL 94 (223)
T 3dfz_A 42 IATRRIKGFLQE--GAAITVVAPTVS-------------AEINEWEAK----GQLRVKRK---KVGEED----LL-NVFF 94 (223)
T ss_dssp HHHHHHHHHGGG--CCCEEEECSSCC-------------HHHHHHHHT----TSCEEECS---CCCGGG----SS-SCSE
T ss_pred HHHHHHHHHHHC--CCEEEEECCCCC-------------HHHHHHHHc----CCcEEEEC---CCCHhH----hC-CCCE
Confidence 444445555543 467777776544 345566654 45777642 222222 34 3788
Q ss_pred EEECCCCCCCcHHHHHHHHcCCcEEEcCcccccccc-----ccCceEEEEC-CCCHHHHHHHHHHHHHHhcCCH-HHHHH
Q 036539 629 FVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEII-----VDGVSGFHID-PYNGDESSDKIADFFEACKVDP-TYWNK 701 (749)
Q Consensus 629 fV~PS~~E~fGLtvlEAMa~GlPVVat~~GG~~EiI-----~dg~~G~lv~-p~d~e~lA~aI~~~l~~l~~dp-~~~~~ 701 (749)
++...-.+..-..+.++...|+||-..|.+...+.+ ..|.--+-|. .+..-.+|..|.+-++.++... ..+-+
T Consensus 95 VIaAT~d~~~N~~I~~~ak~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~~lp~~~~~~~~ 174 (223)
T 3dfz_A 95 IVVATNDQAVNKFVKQHIKNDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLSSNYDESYTQYTQ 174 (223)
T ss_dssp EEECCCCTHHHHHHHHHSCTTCEEEC-----CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHSCTHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHhCCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHHHccHHHHHHHH
Confidence 776654444444555544479999888776654444 4443333332 3455689999998888776432 34444
Q ss_pred HHHHHHHHHHHhCC
Q 036539 702 FSTEGLKRINECYT 715 (749)
Q Consensus 702 ms~~a~~~v~~~ys 715 (749)
+...-|+++.+.+.
T Consensus 175 ~~~~~R~~vk~~~~ 188 (223)
T 3dfz_A 175 FLYECRVLIHRLNV 188 (223)
T ss_dssp HHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHCC
Confidence 45555666655554
No 118
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=32.45 E-value=2.4e+02 Score=24.11 Aligned_cols=109 Identities=14% Similarity=0.160 Sum_probs=66.4
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECCC-CCCCcH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPAL-YEAFGL 640 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS~-~E~fGL 640 (749)
..+++|+.+.+. ..+.+....+..|. .|.... +..+....+. ...|++++=.. ...-|+
T Consensus 4 ~~~Ilivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~al~~~~~~~~dlvllD~~l~~~~g~ 64 (136)
T 2qzj_A 4 QTKILIIDGDKD-----------NCQKLKGFLEEKGI--SIDLAY------NCEEAIGKIFSNKYDLIFLEIILSDGDGW 64 (136)
T ss_dssp CCEEEEECSCHH-----------HHHHHHHHHHTTTC--EEEEES------SHHHHHHHHHHCCCSEEEEESEETTEEHH
T ss_pred CCeEEEEcCCHH-----------HHHHHHHHHHHCCC--EEEEEC------CHHHHHHHHHhcCCCEEEEeCCCCCCCHH
Confidence 357777776643 24556666665443 344322 2345555544 23577775332 234577
Q ss_pred HHHHHHHc--CCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHHH
Q 036539 641 TVIEAMNC--GLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFFE 690 (749)
Q Consensus 641 tvlEAMa~--GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~ 690 (749)
.+++.+.. .+|+|. |.... ..+.+..|..||+..|-+.+++.++|..++.
T Consensus 65 ~l~~~l~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~l~~~~~ 120 (136)
T 2qzj_A 65 TLCKKIRNVTTCPIVYMTYINEDQSILNALNSGGDDYLIKPLNLEILYAKVKAILR 120 (136)
T ss_dssp HHHHHHHTTCCCCEEEEESCCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCCCEEEEEcCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHHH
Confidence 77777753 578776 33333 2345567889999999999999999976553
No 119
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=32.33 E-value=1.4e+02 Score=26.33 Aligned_cols=106 Identities=10% Similarity=0.150 Sum_probs=61.5
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEE-EecCccCcCChHHHHHHHHc---cCcEEEECCC-CCCC
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMR-WIAAQSDRLRNGELYRCIAD---TKGAFVQPAL-YEAF 638 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~-flG~~~~~~~~~el~~~la~---aadvfV~PS~-~E~f 638 (749)
.+++|+.+... ..+.+....++.|. .+. .. .+..+....+.. ..|++++=.. .+.-
T Consensus 37 ~~Ilivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~~al~~l~~~~~~~dliilD~~l~~~~ 97 (157)
T 3hzh_A 37 FNVLIVDDSVF-----------TVKQLTQIFTSEGF--NIIDTA------ADGEEAVIKYKNHYPNIDIVTLXITMPKMD 97 (157)
T ss_dssp CEEEEECSCHH-----------HHHHHHHHHHHTTC--EEEEEE------SSHHHHHHHHHHHGGGCCEEEECSSCSSSC
T ss_pred eEEEEEeCCHH-----------HHHHHHHHHHhCCC--eEEEEE------CCHHHHHHHHHhcCCCCCEEEEeccCCCcc
Confidence 46666665432 24455555555542 222 21 223455555442 2466665433 3445
Q ss_pred cHHHHHHHH---cCCcEEEc-Cccc---cccccccCceEEEECCCCHHHHHHHHHHH
Q 036539 639 GLTVIEAMN---CGLPTFAT-NQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADF 688 (749)
Q Consensus 639 GLtvlEAMa---~GlPVVat-~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~ 688 (749)
|+.+++.+. ..+|+|.. .... ..+.+..|..+|+..|.+.+++.++|..+
T Consensus 98 g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~ 154 (157)
T 3hzh_A 98 GITCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAKTFIVKPLDRAKVLQRVMSV 154 (157)
T ss_dssp HHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHT
T ss_pred HHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHH
Confidence 666666554 36788773 3332 23445678899999999999999998543
No 120
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=32.05 E-value=1.8e+02 Score=24.83 Aligned_cols=108 Identities=9% Similarity=0.144 Sum_probs=65.0
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCCCCCCcHH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPALYEAFGLT 641 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~~E~fGLt 641 (749)
..+++|+.+.+. ..+.+....++.|. .|.... +..+....+.. ..|++++=...+.-|+.
T Consensus 4 ~~~iLivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~a~~~l~~~~~dlvi~d~~~~~~g~~ 64 (142)
T 2qxy_A 4 TPTVMVVDESRI-----------TFLAVKNALEKDGF--NVIWAK------NEQEAFTFLRREKIDLVFVDVFEGEESLN 64 (142)
T ss_dssp CCEEEEECSCHH-----------HHHHHHHHHGGGTC--EEEEES------SHHHHHHHHTTSCCSEEEEECTTTHHHHH
T ss_pred CCeEEEEeCCHH-----------HHHHHHHHHHhCCC--EEEEEC------CHHHHHHHHhccCCCEEEEeCCCCCcHHH
Confidence 356777776543 34556666666553 344332 24455555542 25777664422234556
Q ss_pred HHHHHH---cCCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 642 VIEAMN---CGLPTFA-TNQGGP---AEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 642 vlEAMa---~GlPVVa-t~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
+++.+. ..+|+|. |..... .+.+..|..+++..|.+.+++.++|..++
T Consensus 65 ~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~ 119 (142)
T 2qxy_A 65 LIRRIREEFPDTKVAVLSAYVDKDLIINSVKAGAVDYILKPFRLDYLLERVKKII 119 (142)
T ss_dssp HHHHHHHHCTTCEEEEEESCCCHHHHHHHHHHTCSCEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCcceeEeCCCCHHHHHHHHHHHH
Confidence 666554 3688877 343332 33456688899999999999999997665
No 121
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=31.95 E-value=2.3e+02 Score=23.88 Aligned_cols=108 Identities=10% Similarity=0.113 Sum_probs=68.7
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHcc--CcEEEECCC-CCCCc
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADT--KGAFVQPAL-YEAFG 639 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~a--advfV~PS~-~E~fG 639 (749)
..+++|+.+.+. ..+.+.+..++.|. .|.... +..+....+... .|++++=.. .+.-|
T Consensus 7 ~~~ilivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~a~~~~~~~~~~dlvi~D~~l~~~~g 67 (136)
T 3hdv_A 7 RPLVLVVDDNAV-----------NREALILYLKSRGI--DAVGAD------GAEEARLYLHYQKRIGLMITDLRMQPESG 67 (136)
T ss_dssp CCEEEEECSCHH-----------HHHHHHHHHHHTTC--CEEEES------SHHHHHHHHHHCTTEEEEEECSCCSSSCH
T ss_pred CCeEEEECCCHH-----------HHHHHHHHHHHcCc--eEEEeC------CHHHHHHHHHhCCCCcEEEEeccCCCCCH
Confidence 357888877643 35566777777654 344432 244555555432 466665433 45578
Q ss_pred HHHHHHHHc----CCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 640 LTVIEAMNC----GLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 640 LtvlEAMa~----GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
+.+++.+.. .+|+|. |.... ..+.+..|..+|+..|.+.+++.++|.+..
T Consensus 68 ~~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~ 125 (136)
T 3hdv_A 68 LDLIRTIRASERAALSIIVVSGDTDVEEAVDVMHLGVVDFLLKPVDLGKLLELVNKEL 125 (136)
T ss_dssp HHHHHHHHTSTTTTCEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCChHHHHHHHhCCcceEEeCCCCHHHHHHHHHHHh
Confidence 888887754 467777 33333 234456788999999999999999996544
No 122
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=31.63 E-value=2.6e+02 Score=24.30 Aligned_cols=108 Identities=8% Similarity=0.147 Sum_probs=66.1
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCC-CCCCcH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPAL-YEAFGL 640 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~-~E~fGL 640 (749)
..+++|+.+.+. ..+.+....+..|. .|.... +..+....+.. ..|++++-.. .+.-|+
T Consensus 7 ~~~iLivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~a~~~l~~~~~dlvi~d~~l~~~~g~ 67 (154)
T 2rjn_A 7 NYTVMLVDDEQP-----------ILNSLKRLIKRLGC--NIITFT------SPLDALEALKGTSVQLVISDMRMPEMGGE 67 (154)
T ss_dssp CCEEEEECSCHH-----------HHHHHHHHHHTTTC--EEEEES------CHHHHHHHHTTSCCSEEEEESSCSSSCHH
T ss_pred CCeEEEEcCCHH-----------HHHHHHHHHHHcCC--eEEEeC------CHHHHHHHHhcCCCCEEEEecCCCCCCHH
Confidence 467888876643 34556666665543 344332 34566666553 2577775432 344577
Q ss_pred HHHHHHH---cCCcEEE-cCcccc---ccccccC-ceEEEECCCCHHHHHHHHHHHH
Q 036539 641 TVIEAMN---CGLPTFA-TNQGGP---AEIIVDG-VSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 641 tvlEAMa---~GlPVVa-t~~GG~---~EiI~dg-~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.+++.+. ..+|+|. |..... .+.+..| ..+++..|.+.+++..+|..++
T Consensus 68 ~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~~l~kP~~~~~L~~~i~~~~ 124 (154)
T 2rjn_A 68 VFLEQVAKSYPDIERVVISGYADAQATIDAVNRGKISRFLLKPWEDEDVFKVVEKGL 124 (154)
T ss_dssp HHHHHHHHHCTTSEEEEEECGGGHHHHHHHHHTTCCSEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcEEEEecCCCHHHHHHHHhccchheeeeCCCCHHHHHHHHHHHH
Confidence 7776664 3678876 443332 2334455 7899999999999999997655
No 123
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=31.41 E-value=1.8e+02 Score=28.49 Aligned_cols=18 Identities=39% Similarity=0.379 Sum_probs=12.6
Q ss_pred HHHHcCCcccceEEEEeCCC
Q 036539 282 RIKQQGLYIKPQIVVVTRLI 301 (749)
Q Consensus 282 ~L~~~G~eV~~~i~V~T~~~ 301 (749)
.++++|++|. |+++|...
T Consensus 24 ~~~~~G~~v~--vv~lT~G~ 41 (227)
T 1uan_A 24 RAKAEGLSTG--ILDLTRGE 41 (227)
T ss_dssp HHHHTTCCEE--EEEEECCT
T ss_pred HHHhCCCcEE--EEEEcCCC
Confidence 4568999997 55666553
No 124
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=30.95 E-value=2.3e+02 Score=23.63 Aligned_cols=108 Identities=11% Similarity=0.125 Sum_probs=65.6
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECCC-CCCCcH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPAL-YEAFGL 640 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS~-~E~fGL 640 (749)
..+++|+.+.+. ..+.+.+..++.|. .|.... +..+....+. ...|++++=.. .+.-|+
T Consensus 6 ~~~ilivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~a~~~l~~~~~dlii~d~~l~~~~g~ 66 (132)
T 3lte_A 6 SKRILVVDDDQA-----------MAAAIERVLKRDHW--QVEIAH------NGFDAGIKLSTFEPAIMTLDLSMPKLDGL 66 (132)
T ss_dssp -CEEEEECSCHH-----------HHHHHHHHHHHTTC--EEEEES------SHHHHHHHHHHTCCSEEEEESCBTTBCHH
T ss_pred CccEEEEECCHH-----------HHHHHHHHHHHCCc--EEEEeC------CHHHHHHHHHhcCCCEEEEecCCCCCCHH
Confidence 357777776543 34556666666543 344332 2345555443 33577765433 455688
Q ss_pred HHHHHHHc-----CCcEEEcCccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 641 TVIEAMNC-----GLPTFATNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 641 tvlEAMa~-----GlPVVat~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.+++.+.. ..|++.+.... ..+.+..|..+|+..|.+.+++.++|....
T Consensus 67 ~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~ 123 (132)
T 3lte_A 67 DVIRSLRQNKVANQPKILVVSGLDKAKLQQAVTEGADDYLEKPFDNDALLDRIHDLV 123 (132)
T ss_dssp HHHHHHHTTTCSSCCEEEEECCSCSHHHHHHHHHTCCEEECSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCccCCCeEEEEeCCChHHHHHHHHhChHHHhhCCCCHHHHHHHHHHHc
Confidence 88888764 34555543222 234456788999999999999999996543
No 125
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=30.32 E-value=2.1e+02 Score=23.64 Aligned_cols=95 Identities=15% Similarity=0.125 Sum_probs=55.8
Q ss_pred HHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECCC-CCCCcHHHHHHHHc-----CCcEEEc-Ccc
Q 036539 587 IKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPAL-YEAFGLTVIEAMNC-----GLPTFAT-NQG 658 (749)
Q Consensus 587 ~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS~-~E~fGLtvlEAMa~-----GlPVVat-~~G 658 (749)
.+.+....+..|. .+.... +..+....+. ...|++++=.. .+.-|+.+++.+.. .+|+|.. ...
T Consensus 14 ~~~l~~~L~~~~~--~v~~~~------~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 85 (124)
T 1mb3_A 14 MKLFHDLLEAQGY--ETLQTR------EGLSALSIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAFA 85 (124)
T ss_dssp HHHHHHHHHHTTC--EEEEES------CHHHHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC---
T ss_pred HHHHHHHHHHcCc--EEEEeC------CHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECCC
Confidence 4556666666543 333322 2334444443 23577765332 34457778777753 5788773 332
Q ss_pred c---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 659 G---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 659 G---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
. ..+....|..+|+..|.+.+++.++|..++
T Consensus 86 ~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~ 119 (124)
T 1mb3_A 86 MKGDEERIREGGCEAYISKPISVVHFLETIKRLL 119 (124)
T ss_dssp ---CHHHHHHHTCSEEECSSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCCCCEEEeCCCCHHHHHHHHHHHH
Confidence 2 233445688899999999999999886543
No 126
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=29.85 E-value=2.2e+02 Score=24.68 Aligned_cols=109 Identities=9% Similarity=0.006 Sum_probs=65.4
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHc-CCCCcEEEecCccCcCChHHHHHHHHc--cCcEEEECCC-CCCC
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKY-QLKGQMRWIAAQSDRLRNGELYRCIAD--TKGAFVQPAL-YEAF 638 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~-~L~~~V~flG~~~~~~~~~el~~~la~--aadvfV~PS~-~E~f 638 (749)
..+++|+.+.+. ..+.+....++. +. ..|.... +..+....+.. ..|++++-.. .+.-
T Consensus 3 ~~~iLivdd~~~-----------~~~~l~~~L~~~~g~-~~v~~~~------~~~~a~~~l~~~~~~dlvi~d~~l~~~~ 64 (154)
T 2qsj_A 3 LTVVLIVDDHHL-----------IRAGAKNLLEGAFSG-MRVEGAE------TVSDALAFLEADNTVDLILLDVNLPDAE 64 (154)
T ss_dssp CEEEEEECSCHH-----------HHHHHHHHHHHHCTT-EEEEEES------SHHHHHHHHHTTCCCSEEEECC------
T ss_pred ccEEEEEcCCHH-----------HHHHHHHHHHhCCCc-eEEEEec------CHHHHHHHHhccCCCCEEEEeCCCCCCc
Confidence 357778876543 355666666665 32 1333332 34566666653 3688776443 2335
Q ss_pred cHHHHHHHH---cCCcEEEc-Cccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 639 GLTVIEAMN---CGLPTFAT-NQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 639 GLtvlEAMa---~GlPVVat-~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
|+.+++.+. .++|+|.. .... ..+.+..|..|++..|.+.+++.++|..++
T Consensus 65 g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~l~~~~ 122 (154)
T 2qsj_A 65 AIDGLVRLKRFDPSNAVALISGETDHELIRAALEAGADGFIPKSADPQVLIHAVSLIL 122 (154)
T ss_dssp CHHHHHHHHHHCTTSEEEEC-----CHHHHHHHHTTCCBBCCTTSCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHccCCEEEeCCCCHHHHHHHHHHHH
Confidence 777776665 36888874 3322 234456788999999999999999997665
No 127
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=29.70 E-value=25 Score=35.89 Aligned_cols=19 Identities=26% Similarity=0.242 Sum_probs=15.8
Q ss_pred HHHHHHHHcCCcccceEEEEeCC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
.+++.|.++|++|. ++++.
T Consensus 17 ~l~~~L~~~g~~V~----~~~r~ 35 (311)
T 3m2p_A 17 YVVESIKNDGNTPI----ILTRS 35 (311)
T ss_dssp HHHHHHHHTTCEEE----EEESC
T ss_pred HHHHHHHhCCCEEE----EEeCC
Confidence 66778899999988 88876
No 128
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=29.50 E-value=84 Score=31.28 Aligned_cols=19 Identities=21% Similarity=0.308 Sum_probs=15.2
Q ss_pred HHHHHHHHcCCcccceEEEEeCC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
.+++.|+++|++|. ++.+.
T Consensus 42 aia~~l~~~G~~V~----~~~r~ 60 (260)
T 3gem_A 42 HCALRLLEHGHRVI----ISYRT 60 (260)
T ss_dssp HHHHHHHHTTCCEE----EEESS
T ss_pred HHHHHHHHCCCEEE----EEeCC
Confidence 67788999999987 76654
No 129
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=29.46 E-value=3.1e+02 Score=25.62 Aligned_cols=109 Identities=12% Similarity=0.127 Sum_probs=67.3
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECC-CCCCCcHH
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPA-LYEAFGLT 641 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS-~~E~fGLt 641 (749)
.+++|+.+.+. ..+.+....+..|. .|.... +..+....+. ...|++++=. ....-|+.
T Consensus 3 ~~ilivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~a~~~~~~~~~dlvllD~~l~~~~g~~ 63 (225)
T 1kgs_A 3 VRVLVVEDERD-----------LADLITEALKKEMF--TVDVCY------DGEEGMYMALNEPFDVVILDIMLPVHDGWE 63 (225)
T ss_dssp CEEEEECSSHH-----------HHHHHHHHHHHTTC--EEEEES------SHHHHHHHHHHSCCSEEEEESCCSSSCHHH
T ss_pred ceEEEEeCCHH-----------HHHHHHHHHHHCCC--EEEEEC------CHHHHHHHHhcCCCCEEEEeCCCCCCCHHH
Confidence 35667766543 24556666666543 344322 2344444443 2357777543 23456777
Q ss_pred HHHHHH---cCCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHHHH
Q 036539 642 VIEAMN---CGLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFFEA 691 (749)
Q Consensus 642 vlEAMa---~GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~ 691 (749)
+++.+. ..+|+|. |.... ..+.+..|..||+..|.+++++..+|..++..
T Consensus 64 ~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~~~~~ 120 (225)
T 1kgs_A 64 ILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIRR 120 (225)
T ss_dssp HHHHHHHTTCCCCEEEEESSCHHHHHHHTCCCCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCEEEEeCCCCHHHHHHHHhCCccEEEeCCCCHHHHHHHHHHHHhh
Confidence 777765 3678887 44333 23455678899999999999999999887654
No 130
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=29.00 E-value=2.5e+02 Score=23.36 Aligned_cols=106 Identities=8% Similarity=0.103 Sum_probs=64.3
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc--cCcEEEECCC-CC-CC
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD--TKGAFVQPAL-YE-AF 638 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~--aadvfV~PS~-~E-~f 638 (749)
..+++|+.+.+. ..+.+....+..|. +|.... +..+....+.. ..|++++=.. .+ .-
T Consensus 5 ~~~ilivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~a~~~l~~~~~~dlvi~d~~l~~~~~ 65 (132)
T 2rdm_A 5 AVTILLADDEAI-----------LLLDFESTLTDAGF--LVTAVS------SGAKAIEMLKSGAAIDGVVTDIRFCQPPD 65 (132)
T ss_dssp SCEEEEECSSHH-----------HHHHHHHHHHHTTC--EEEEES------SHHHHHHHHHTTCCCCEEEEESCCSSSSC
T ss_pred CceEEEEcCcHH-----------HHHHHHHHHHHcCC--EEEEEC------CHHHHHHHHHcCCCCCEEEEeeeCCCCCC
Confidence 357788876643 34556666666553 344322 34566666664 3577776433 33 46
Q ss_pred cHHHHHHHH---cCCcEEEc-Ccccc---ccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 639 GLTVIEAMN---CGLPTFAT-NQGGP---AEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 639 GLtvlEAMa---~GlPVVat-~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
|+.+++.+. ..+|+|.. ..... .+.+.. .||+..|-+.+++..+|.+++
T Consensus 66 g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~--~~~l~kP~~~~~l~~~i~~~~ 121 (132)
T 2rdm_A 66 GWQVARVAREIDPNMPIVYISGHAALEWASNGVPD--SIILEKPFTSAQLITAVSQLL 121 (132)
T ss_dssp HHHHHHHHHHHCTTCCEEEEESSCCTTHHHHSCTT--CEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCccHHHHHhhcCC--cceEeCCCCHHHHHHHHHHHH
Confidence 777777664 36888773 33322 222223 379999999999999997655
No 131
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=28.97 E-value=2.9e+02 Score=26.56 Aligned_cols=110 Identities=8% Similarity=0.123 Sum_probs=67.7
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECC-CCCCCcH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPA-LYEAFGL 640 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS-~~E~fGL 640 (749)
..+++||.+.+. ..+.+....+..|. .|.... +..+....+. ...|++++=- ..+.-|+
T Consensus 23 ~~~ILivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~al~~~~~~~~dlvllD~~lp~~~g~ 83 (250)
T 3r0j_A 23 EARVLVVDDEAN-----------IVELLSVSLKFQGF--EVYTAT------NGAQALDRARETRPDAVILDVXMPGMDGF 83 (250)
T ss_dssp SCEEEEECSCHH-----------HHHHHHHHHHHTTC--EEEEES------SHHHHHHHHHHHCCSEEEEESCCSSSCHH
T ss_pred CceEEEEECCHH-----------HHHHHHHHHHHCCC--EEEEEC------CHHHHHHHHHhCCCCEEEEeCCCCCCCHH
Confidence 467777776543 24455555655543 333322 2344444443 2357766532 2345677
Q ss_pred HHHHHHHc---CCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHHHH
Q 036539 641 TVIEAMNC---GLPTFA-TNQGGP---AEIIVDGVSGFHIDPYNGDESSDKIADFFEA 691 (749)
Q Consensus 641 tvlEAMa~---GlPVVa-t~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~ 691 (749)
.+++.+.. .+|+|. |..... .+.+..|..||+..|.+.+++..+|..++.+
T Consensus 84 ~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~yl~Kp~~~~~L~~~i~~~~~~ 141 (250)
T 3r0j_A 84 GVLRRLRADGIDAPALFLTARDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILRR 141 (250)
T ss_dssp HHHHHHHHTTCCCCEEEEECSTTHHHHHHHHTSTTCEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHcCCcEEEeCCCCHHHHHHHHHHHHHh
Confidence 77777653 578876 444433 3345678899999999999999999887654
No 132
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=28.96 E-value=1.4e+02 Score=25.64 Aligned_cols=107 Identities=15% Similarity=0.261 Sum_probs=67.9
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHH-cCCCCcEEEecCccCcCChHHHHHHHHc--cCcEEEECCCC--CCC
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEK-YQLKGQMRWIAAQSDRLRNGELYRCIAD--TKGAFVQPALY--EAF 638 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~-~~L~~~V~flG~~~~~~~~~el~~~la~--aadvfV~PS~~--E~f 638 (749)
.+++|+.+.+. ....+....++ .+. .|.... +..+..+.+.. ..|++++=... +.-
T Consensus 5 ~~ilivdd~~~-----------~~~~l~~~L~~~~~~--~v~~~~------~~~~a~~~l~~~~~~dlvi~D~~l~~~~~ 65 (140)
T 3lua_A 5 GTVLLIDYFEY-----------EREKTKIIFDNIGEY--DFIEVE------NLKKFYSIFKDLDSITLIIMDIAFPVEKE 65 (140)
T ss_dssp CEEEEECSCHH-----------HHHHHHHHHHHHCCC--EEEEEC------SHHHHHTTTTTCCCCSEEEECSCSSSHHH
T ss_pred CeEEEEeCCHH-----------HHHHHHHHHHhccCc--cEEEEC------CHHHHHHHHhcCCCCcEEEEeCCCCCCCc
Confidence 56777776543 34566666766 543 344332 24455555542 36787775443 335
Q ss_pred cHHHHHHHHc-----CCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 639 GLTVIEAMNC-----GLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 639 GLtvlEAMa~-----GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
|+.+++.+.. .+|+|. |.... ..+.+..|..+|+..|-+.+++.++|..++
T Consensus 66 g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~ 125 (140)
T 3lua_A 66 GLEVLSAIRNNSRTANTPVIIATKSDNPGYRHAALKFKVSDYILKPYPTKRLENSVRSVL 125 (140)
T ss_dssp HHHHHHHHHHSGGGTTCCEEEEESCCCHHHHHHHHHSCCSEEEESSCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHH
Confidence 6777776654 788887 43332 234456788999999999999999997654
No 133
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=28.50 E-value=53 Score=31.91 Aligned_cols=39 Identities=13% Similarity=0.071 Sum_probs=23.1
Q ss_pred ceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHc--CCccc
Q 036539 237 ILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQ--GLYIK 291 (749)
Q Consensus 237 m~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~--G~eV~ 291 (749)
|+|||++|+.|--|+ .+|. .++|.+.+.+.+.++ |++|+
T Consensus 3 mM~kiLiI~gSpr~~---------~~S~-------s~~l~~~~~~~~~~~~~g~ev~ 43 (211)
T 3p0r_A 3 AMTKVLFVKANNRPA---------EQAV-------SVKLYEAFLASYKEAHPNDTVV 43 (211)
T ss_dssp -CCEEEEEECCCSCT---------TTCH-------HHHHHHHHHHHHHHHCTTSEEE
T ss_pred ccCEEEEEEeCCCCC---------CCCH-------HHHHHHHHHHHHHHhCCCCeEE
Confidence 678999996443210 2332 233444666778777 88887
No 134
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=28.47 E-value=38 Score=32.14 Aligned_cols=35 Identities=23% Similarity=0.234 Sum_probs=22.9
Q ss_pred cCCceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCccc
Q 036539 234 SLPILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIK 291 (749)
Q Consensus 234 ~~pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~ 291 (749)
++.+.|||+|=|.|+-+ + |-+.|.+.|.++||+|.
T Consensus 16 ~~~~~MkIaIgsDhaG~--------------~---------lK~~i~~~L~~~G~eV~ 50 (169)
T 3ph3_A 16 PRGSHMKIGIGSDHGGY--------------N---------LKREIADFLKKRGYEVI 50 (169)
T ss_dssp -----CEEEEEECGGGH--------------H---------HHHHHHHHHHHTTCEEE
T ss_pred ccCCCCEEEEEeCchHH--------------H---------HHHHHHHHHHHCCCEEE
Confidence 56677999999988732 1 23367778999999997
No 135
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=28.42 E-value=2.9e+02 Score=23.94 Aligned_cols=107 Identities=18% Similarity=0.200 Sum_probs=66.1
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCC-CCCCcHH
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPAL-YEAFGLT 641 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~-~E~fGLt 641 (749)
.+++|+.+.+. ....+.......|. .|.... +..+....+.. ..|++++-.. .+.-|+.
T Consensus 4 ~~ILivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~a~~~l~~~~~dliild~~l~~~~g~~ 64 (155)
T 1qkk_A 4 PSVFLIDDDRD-----------LRKAMQQTLELAGF--TVSSFA------SATEALAGLSADFAGIVISDIRMPGMDGLA 64 (155)
T ss_dssp CEEEEECSCHH-----------HHHHHHHHHHHTTC--EEEEES------CHHHHHHTCCTTCCSEEEEESCCSSSCHHH
T ss_pred CEEEEEeCCHH-----------HHHHHHHHHHHcCc--EEEEEC------CHHHHHHHHHhCCCCEEEEeCCCCCCCHHH
Confidence 46777776543 34556666666553 344332 23455554432 2577665432 3445777
Q ss_pred HHHHHH---cCCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 642 VIEAMN---CGLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 642 vlEAMa---~GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
+++.+. ..+|+|. |.... ..+.+..|..+++..|.+.+++..+|..++
T Consensus 65 ~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~L~~~i~~~~ 119 (155)
T 1qkk_A 65 LFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAE 119 (155)
T ss_dssp HHHHHHHHCTTSCEEEEECGGGHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCCCEEEEECCCChHHHHHHHhcCCCeEEeCCCCHHHHHHHHHHHH
Confidence 776664 3788887 33333 234456788999999999999999997665
No 136
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=28.37 E-value=2.8e+02 Score=23.74 Aligned_cols=75 Identities=7% Similarity=0.020 Sum_probs=45.8
Q ss_pred hHHHHHHHHc-cCcEEEECCC-CCCCcHHHHHHHH---cCCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHH
Q 036539 615 NGELYRCIAD-TKGAFVQPAL-YEAFGLTVIEAMN---CGLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKI 685 (749)
Q Consensus 615 ~~el~~~la~-aadvfV~PS~-~E~fGLtvlEAMa---~GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI 685 (749)
..+....+.. ..|++++=.. ...-|+.+++.+. .++|+|. |.... ..+.+..|..+|+..|.+.+++.++|
T Consensus 38 ~~~al~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i 117 (141)
T 3cu5_A 38 GINAIQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPIDPSEIMDAL 117 (141)
T ss_dssp HHHHHHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCSTTTCCC------CCCEEECSSCCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCCCcHHHHHHHHhCCccEEEeCCCCHHHHHHHH
Confidence 4455555542 2577775332 3446777777664 4678776 43332 34445678889999999999999999
Q ss_pred HHHH
Q 036539 686 ADFF 689 (749)
Q Consensus 686 ~~~l 689 (749)
...+
T Consensus 118 ~~~~ 121 (141)
T 3cu5_A 118 KQSI 121 (141)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 137
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=28.18 E-value=2.4e+02 Score=24.92 Aligned_cols=88 Identities=23% Similarity=0.125 Sum_probs=47.7
Q ss_pred HHHHHHHHcCCcccceEEEEeCCCCCCCCCccCCccccccCccceEEEEecCccCCccccccccccccccchHHHHHHHH
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRLIPDARGTKCNQELEPIEGTKHSNILRVPFKTDKGILHRWVSRFDVYPYLEGFAQDAT 357 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~~p~~~g~~~~~~~e~i~~~~~~~I~rvp~~~~~~~~~~~isr~~i~pyl~~f~~~~~ 357 (749)
.+.+.|.+.|++|. -+.+....-.|..|...+..+++ ...-++-+|. ....++.
T Consensus 22 ~v~~~L~~~g~~V~----pVnP~~~~i~G~~~y~sl~dlp~-vDlavi~~p~---------------------~~v~~~v 75 (122)
T 3ff4_A 22 LAAERLKSHGHEFI----PVGRKKGEVLGKTIINERPVIEG-VDTVTLYINP---------------------QNQLSEY 75 (122)
T ss_dssp HHHHHHHHHTCCEE----EESSSCSEETTEECBCSCCCCTT-CCEEEECSCH---------------------HHHGGGH
T ss_pred HHHHHHHHCCCeEE----EECCCCCcCCCeeccCChHHCCC-CCEEEEEeCH---------------------HHHHHHH
Confidence 45567888999776 66665444445555555666655 4444444442 2223344
Q ss_pred HHHHHHcCCCceEEEEcCCCchHHHHHHHHcCCCcEE
Q 036539 358 TMILEFLGGKPDLIIGNYSDGNLVASVMASKLGITQA 394 (749)
Q Consensus 358 ~~l~~~l~~~pDIIh~h~~~~~lva~lla~~~gvp~v 394 (749)
+++.+. +-+ -+ ..+.....--+.-+++..|+.++
T Consensus 76 ~e~~~~-g~k-~v-~~~~G~~~~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 76 NYILSL-KPK-RV-IFNPGTENEELEEILSENGIEPV 109 (122)
T ss_dssp HHHHHH-CCS-EE-EECTTCCCHHHHHHHHHTTCEEE
T ss_pred HHHHhc-CCC-EE-EECCCCChHHHHHHHHHcCCeEE
Confidence 444443 323 24 44433334445556777888766
No 138
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=27.79 E-value=2.6e+02 Score=23.17 Aligned_cols=106 Identities=10% Similarity=0.138 Sum_probs=66.6
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECC-CCCCCcHH
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPA-LYEAFGLT 641 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS-~~E~fGLt 641 (749)
.+++|+.+.+. ..+.+.+..++.|. .|.... +..+..+.+. ...|++++=. ..+.-|+.
T Consensus 4 ~~ilivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~a~~~l~~~~~dlii~D~~l~~~~g~~ 64 (127)
T 3i42_A 4 QQALIVEDYQA-----------AAETFKELLEMLGF--QADYVM------SGTDALHAMSTRGYDAVFIDLNLPDTSGLA 64 (127)
T ss_dssp EEEEEECSCHH-----------HHHHHHHHHHHTTE--EEEEES------SHHHHHHHHHHSCCSEEEEESBCSSSBHHH
T ss_pred ceEEEEcCCHH-----------HHHHHHHHHHHcCC--CEEEEC------CHHHHHHHHHhcCCCEEEEeCCCCCCCHHH
Confidence 56777776543 35566777777654 344432 3445555554 2357766543 34556888
Q ss_pred HHHHHHc-----CCcEEE-cCcccc--ccccccCceEEEECCCCHHHHHHHHHHH
Q 036539 642 VIEAMNC-----GLPTFA-TNQGGP--AEIIVDGVSGFHIDPYNGDESSDKIADF 688 (749)
Q Consensus 642 vlEAMa~-----GlPVVa-t~~GG~--~EiI~dg~~G~lv~p~d~e~lA~aI~~~ 688 (749)
+++.+.. .+|+|. |..... .+.+..|..+|+..|-+.+++.+++...
T Consensus 65 ~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~ 119 (127)
T 3i42_A 65 LVKQLRALPMEKTSKFVAVSGFAKNDLGKEACELFDFYLEKPIDIASLEPILQSI 119 (127)
T ss_dssp HHHHHHHSCCSSCCEEEEEECC-CTTCCHHHHHHCSEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHhhhccCCCCEEEEECCcchhHHHHHHHhhHHheeCCCCHHHHHHHHHHh
Confidence 8877754 478877 333322 3445567889999999999999999643
No 139
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=27.00 E-value=2.9e+02 Score=27.96 Aligned_cols=14 Identities=14% Similarity=-0.043 Sum_probs=10.6
Q ss_pred HHHHHHHHcCCccc
Q 036539 278 ELLLRIKQQGLYIK 291 (749)
Q Consensus 278 eLa~~L~~~G~eV~ 291 (749)
.+++.|.++|+++.
T Consensus 39 ~l~~~L~~~g~~~~ 52 (346)
T 4egb_A 39 NFVHYMLQSYETYK 52 (346)
T ss_dssp HHHHHHHHHCTTEE
T ss_pred HHHHHHHhhCCCcE
Confidence 56678899997665
No 140
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=26.58 E-value=1.7e+02 Score=26.72 Aligned_cols=108 Identities=11% Similarity=0.075 Sum_probs=68.8
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCC-CCCCcH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPAL-YEAFGL 640 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~-~E~fGL 640 (749)
..+++||.+.+. ....+....+..|. .|.... +..+..+.+.. ..|++++=.. .+.-|+
T Consensus 7 ~~~iLivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~al~~~~~~~~dlvl~D~~lp~~~g~ 67 (184)
T 3rqi_A 7 DKNFLVIDDNEV-----------FAGTLARGLERRGY--AVRQAH------NKDEALKLAGAEKFEFITVXLHLGNDSGL 67 (184)
T ss_dssp CCEEEEECSCHH-----------HHHHHHHHHHHTTC--EEEEEC------SHHHHHHHHTTSCCSEEEECSEETTEESH
T ss_pred CCeEEEEcCCHH-----------HHHHHHHHHHHCCC--EEEEeC------CHHHHHHHHhhCCCCEEEEeccCCCccHH
Confidence 357788876643 34566666776653 343322 34556666543 2577775332 345677
Q ss_pred HHHHHHHc---CCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 641 TVIEAMNC---GLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 641 tvlEAMa~---GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.+++.+.. .+|+|. |.... ..+.+..|..||+..|-+.+++..+|..++
T Consensus 68 ~~~~~l~~~~~~~~ii~lt~~~~~~~~~~a~~~Ga~~~l~KP~~~~~L~~~i~~~~ 123 (184)
T 3rqi_A 68 SLIAPLCDLQPDARILVLTGYASIATAVQAVKDGADNYLAKPANVESILAALQTNA 123 (184)
T ss_dssp HHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHTSTTH
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHhCHHHheeCCCCHHHHHHHHHHHH
Confidence 77776653 678877 44443 344556788999999999999999986544
No 141
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=26.49 E-value=2.7e+02 Score=22.85 Aligned_cols=106 Identities=11% Similarity=0.127 Sum_probs=64.0
Q ss_pred EEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCC-CCCCcHHH
Q 036539 565 NLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPAL-YEAFGLTV 642 (749)
Q Consensus 565 ~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~-~E~fGLtv 642 (749)
+++|+.+.+. ..+.+....+..|. .+.... +..+....+.. ..|++++=.. .+.-|+.+
T Consensus 4 ~ilivdd~~~-----------~~~~l~~~L~~~~~--~v~~~~------~~~~~~~~~~~~~~dlvi~d~~l~~~~g~~~ 64 (122)
T 1zgz_A 4 HIVIVEDEPV-----------TQARLQSYFTQEGY--TVSVTA------SGAGLREIMQNQSVDLILLDINLPDENGLML 64 (122)
T ss_dssp EEEEECSSHH-----------HHHHHHHHHHHTTC--EEEEES------SHHHHHHHHHHSCCSEEEEESCCSSSCHHHH
T ss_pred EEEEEECCHH-----------HHHHHHHHHHHCCC--eEEEec------CHHHHHHHHhcCCCCEEEEeCCCCCCChHHH
Confidence 5666665533 24456666665543 344332 24455555542 3577765432 34457777
Q ss_pred HHHHH--cCCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 643 IEAMN--CGLPTFA-TNQGGP---AEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 643 lEAMa--~GlPVVa-t~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
++.+. ...|+|. |..+.. .+.+..|..+|+..|.+.+++..+|...+
T Consensus 65 ~~~l~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~~~ 117 (122)
T 1zgz_A 65 TRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLL 117 (122)
T ss_dssp HHHHHTTCCCEEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCEEEEECCCChhhHHHHHHhCHHHHccCCCCHHHHHHHHHHHH
Confidence 77775 3567776 443332 33456688999999999999999986554
No 142
>2cp8_A NEXT to BRCA1 gene 1 protein; UBA domain, structural genomics, human, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=26.44 E-value=67 Score=24.57 Aligned_cols=20 Identities=15% Similarity=0.150 Sum_probs=16.9
Q ss_pred cCCCCCChhhHHHHHhhcCC
Q 036539 179 TLPKDTPYQKFELRFKEWGF 198 (749)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~ 198 (749)
..++++-|..--..|++|||
T Consensus 2 ~~~~ee~~a~~L~~L~eMGF 21 (54)
T 2cp8_A 2 SSGSSGQTAALMAHLFEMGF 21 (54)
T ss_dssp CCSSCTTHHHHHHHHHHHTC
T ss_pred CCCHHHhhHHHHHHHHHcCC
Confidence 46788888877779999999
No 143
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=26.28 E-value=51 Score=33.89 Aligned_cols=51 Identities=10% Similarity=0.018 Sum_probs=29.1
Q ss_pred hhcCCCcchHHHhhhcCCceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCccc
Q 036539 219 VLQAPDPLHMEKFLSSLPILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIK 291 (749)
Q Consensus 219 ~~~~p~~~~~~~~~~~~pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~ 291 (749)
.+..|+...|. . ..++|||++|+ |. |..+|.. +.|.+.+++.+.+.|++|.
T Consensus 43 ~~~~~~~~~~~---~-~~~~mKILiI~--GS---------~R~~S~T-------~~La~~~~~~l~~~G~eve 93 (279)
T 2fzv_A 43 FAIERPALGLA---P-DAPPVRILLLY--GS---------LRARSFS-------RLAVEEAARLLQFFGAETR 93 (279)
T ss_dssp TCCSCTTTTTS---C-CCSCCEEEEEE--SC---------CSSSCHH-------HHHHHHHHHHHHHTTCEEE
T ss_pred HcCCCChhhcc---C-CCCCCEEEEEE--eC---------CCCCCHH-------HHHHHHHHHHHhhCCCEEE
Confidence 44455544442 1 14568999986 33 3334532 2333356667778899987
No 144
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=25.94 E-value=69 Score=32.47 Aligned_cols=37 Identities=16% Similarity=0.188 Sum_probs=24.1
Q ss_pred ceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCccc
Q 036539 237 ILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIK 291 (749)
Q Consensus 237 m~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~ 291 (749)
|+|||++|..|- ..+| ..++|.+.+++.|.+.|++|+
T Consensus 1 ~MmkiLiI~gSp-----------r~~s-------~t~~la~~~~~~l~~~g~eV~ 37 (273)
T 1d4a_A 1 VGRRALIVLAHS-----------ERTS-------FNYAMKEAAAAALKKKGWEVV 37 (273)
T ss_dssp CCCEEEEEECCS-----------CTTS-------HHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEEeCC-----------CCcc-------HHHHHHHHHHHHHHhCCCeEE
Confidence 357999986443 2233 234445567778888999998
No 145
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=25.00 E-value=3.3e+02 Score=23.42 Aligned_cols=107 Identities=14% Similarity=0.199 Sum_probs=64.1
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECC-CCCCCcH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPA-LYEAFGL 640 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS-~~E~fGL 640 (749)
..+++|+.+.+. ....+..+.++.|. .+.... +..+....+. ...|++++=. ..+.-|+
T Consensus 14 ~~~iLivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~al~~~~~~~~dlvl~D~~mp~~~g~ 74 (143)
T 3m6m_D 14 SMRMLVADDHEA-----------NRMVLQRLLEKAGH--KVLCVN------GAEQVLDAMAEEDYDAVIVDLHMPGMNGL 74 (143)
T ss_dssp -CEEEEECSSHH-----------HHHHHHHHHHC--C--EEEEES------SHHHHHHHHHHSCCSEEEEESCCSSSCHH
T ss_pred cceEEEEeCCHH-----------HHHHHHHHHHHcCC--eEEEeC------CHHHHHHHHhcCCCCEEEEeCCCCCCCHH
Confidence 367888876543 24556666665542 343322 2345555544 2357777633 2355678
Q ss_pred HHHHHHH-------cCCcEEEc-Ccccc---ccccccCceEEEECCCCHHHHHHHHHHH
Q 036539 641 TVIEAMN-------CGLPTFAT-NQGGP---AEIIVDGVSGFHIDPYNGDESSDKIADF 688 (749)
Q Consensus 641 tvlEAMa-------~GlPVVat-~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~ 688 (749)
.+++.+. ..+|+|.. ..... .+....|..+|+..|-+.+++.++|.++
T Consensus 75 ~~~~~lr~~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~~~l~~~ 133 (143)
T 3m6m_D 75 DMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAKLLDTLADL 133 (143)
T ss_dssp HHHHHHHHHHHTTCCCCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHhchhccCCCCeEEEEeCCCCHHHHHHHHHcChhheeeCCCCHHHHHHHHHHH
Confidence 8887774 23688774 33322 3344568899999999999999998654
No 146
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=24.78 E-value=87 Score=32.51 Aligned_cols=19 Identities=16% Similarity=0.003 Sum_probs=14.8
Q ss_pred HHHHHHHHc-CCcccceEEEEeCC
Q 036539 278 ELLLRIKQQ-GLYIKPQIVVVTRL 300 (749)
Q Consensus 278 eLa~~L~~~-G~eV~~~i~V~T~~ 300 (749)
.|++.|.++ ||+|. ++++.
T Consensus 39 ~l~~~L~~~~g~~V~----~~~r~ 58 (372)
T 3slg_A 39 HLSKRILETTDWEVF----GMDMQ 58 (372)
T ss_dssp HHHHHHHHHSSCEEE----EEESC
T ss_pred HHHHHHHhCCCCEEE----EEeCC
Confidence 566677887 99998 88775
No 147
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=24.76 E-value=86 Score=31.39 Aligned_cols=47 Identities=17% Similarity=0.113 Sum_probs=26.6
Q ss_pred hHHHhhhcCC-ceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCccc
Q 036539 227 HMEKFLSSLP-ILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIK 291 (749)
Q Consensus 227 ~~~~~~~~~p-m~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~ 291 (749)
..+.|-..-+ ++|||++|+ |. |..+|.. +.|.+.+++.+.+.|++|.
T Consensus 22 ~~~~~~~~~~~~~mkIliI~--GS---------~r~~s~t-------~~La~~~~~~l~~~g~eve 69 (247)
T 2q62_A 22 DSASLRPAFSTHRPRILILY--GS---------LRTVSYS-------RLLAEEARRLLEFFGAEVK 69 (247)
T ss_dssp CGGGGCCCCCCSCCEEEEEE--CC---------CCSSCHH-------HHHHHHHHHHHHHTTCEEE
T ss_pred ChhhhhhhccCCCCeEEEEE--cc---------CCCCCHH-------HHHHHHHHHHHhhCCCEEE
Confidence 3444433334 357999986 33 3334432 2233356667778899887
No 148
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=24.52 E-value=36 Score=32.35 Aligned_cols=19 Identities=21% Similarity=0.343 Sum_probs=15.5
Q ss_pred HHHHHHHHcCCcccceEEEEeCC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
.+++.|.++|++|. ++++.
T Consensus 15 ~l~~~L~~~g~~V~----~~~R~ 33 (221)
T 3ew7_A 15 RILEEAKNRGHEVT----AIVRN 33 (221)
T ss_dssp HHHHHHHHTTCEEE----EEESC
T ss_pred HHHHHHHhCCCEEE----EEEcC
Confidence 56678899999998 88875
No 149
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=24.48 E-value=1.3e+02 Score=31.55 Aligned_cols=95 Identities=12% Similarity=-0.064 Sum_probs=55.6
Q ss_pred cEEEEEecccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCc
Q 036539 533 PIIFSMARLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDR 612 (749)
Q Consensus 533 ~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~ 612 (749)
..|..+|- .. =| ..+++++.. .++++++.+.+... ++..++++++++...+....
T Consensus 7 ~~vgiiG~-G~-ig-~~~~~~l~~----~~~~~lv~v~d~~~-------------~~~~~~a~~~~~~~~~~~~~----- 61 (362)
T 1ydw_A 7 IRIGVMGC-AD-IA-RKVSRAIHL----APNATISGVASRSL-------------EKAKAFATANNYPESTKIHG----- 61 (362)
T ss_dssp EEEEEESC-CT-TH-HHHHHHHHH----CTTEEEEEEECSSH-------------HHHHHHHHHTTCCTTCEEES-----
T ss_pred eEEEEECc-hH-HH-HHHHHHHhh----CCCcEEEEEEcCCH-------------HHHHHHHHHhCCCCCCeeeC-----
Confidence 44666653 11 11 235555543 24677776665432 45567778887643333332
Q ss_pred CChHHHHHHHHc-cCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC
Q 036539 613 LRNGELYRCIAD-TKGAFVQPALYEAFGLTVIEAMNCGLPTFATN 656 (749)
Q Consensus 613 ~~~~el~~~la~-aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~ 656 (749)
++..++++ ..|+++..+......-.+.+|+.+|++|++-.
T Consensus 62 ----~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~V~~EK 102 (362)
T 1ydw_A 62 ----SYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEK 102 (362)
T ss_dssp ----SHHHHHHCTTCCEEEECCCGGGHHHHHHHHHTTTCEEEECS
T ss_pred ----CHHHHhcCCCCCEEEEcCChHHHHHHHHHHHHCCCeEEEec
Confidence 23444542 37888887765555556778999999999854
No 150
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=23.87 E-value=3.5e+02 Score=23.35 Aligned_cols=107 Identities=10% Similarity=0.175 Sum_probs=62.2
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCC-CCCCcHH
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPAL-YEAFGLT 641 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~-~E~fGLt 641 (749)
.+++|+.+.+. ....+....++.|. .|.... +..+....+.. ..|++++=.. .+.-|+.
T Consensus 15 ~~ILivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~ 75 (153)
T 3hv2_A 15 PEILLVDSQEV-----------ILQRLQQLLSPLPY--TLHFAR------DATQALQLLASREVDLVISAAHLPQMDGPT 75 (153)
T ss_dssp CEEEEECSCHH-----------HHHHHHHHHTTSSC--EEEEES------SHHHHHHHHHHSCCSEEEEESCCSSSCHHH
T ss_pred ceEEEECCCHH-----------HHHHHHHHhcccCc--EEEEEC------CHHHHHHHHHcCCCCEEEEeCCCCcCcHHH
Confidence 46677765533 23445555554432 333322 23444444432 2466665332 3455777
Q ss_pred HHHHHH---cCCcEEEc-Cccc---cccccccC-ceEEEECCCCHHHHHHHHHHHH
Q 036539 642 VIEAMN---CGLPTFAT-NQGG---PAEIIVDG-VSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 642 vlEAMa---~GlPVVat-~~GG---~~EiI~dg-~~G~lv~p~d~e~lA~aI~~~l 689 (749)
+++.+. ..+|+|.- .... ..+.+..| ..+|+..|.+.+++..+|..++
T Consensus 76 ~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~l~~~i~~~l 131 (153)
T 3hv2_A 76 LLARIHQQYPSTTRILLTGDPDLKLIAKAINEGEIYRYLSKPWDDQELLLALRQAL 131 (153)
T ss_dssp HHHHHHHHCTTSEEEEECCCCCHHHHHHHHHTTCCSEEECSSCCHHHHHHHHHHHH
T ss_pred HHHHHHhHCCCCeEEEEECCCCHHHHHHHHhCCCcceEEeCCCCHHHHHHHHHHHH
Confidence 776664 36788773 3332 23344567 7899999999999999997665
No 151
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=23.86 E-value=38 Score=35.13 Aligned_cols=19 Identities=21% Similarity=0.186 Sum_probs=15.5
Q ss_pred HHHHHHHHcCCcccceEEEEeCC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
.++..|++.|++|+ ++++.
T Consensus 16 ~~a~~L~~~g~~V~----~~~r~ 34 (320)
T 3i83_A 16 FYGALLAKTGHCVS----VVSRS 34 (320)
T ss_dssp HHHHHHHHTTCEEE----EECST
T ss_pred HHHHHHHhCCCeEE----EEeCC
Confidence 56677899999998 88875
No 152
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=23.82 E-value=3.2e+02 Score=22.90 Aligned_cols=107 Identities=15% Similarity=0.158 Sum_probs=65.1
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECCC-CCCCcHH
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPAL-YEAFGLT 641 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS~-~E~fGLt 641 (749)
.+++|+.+.+. ..+.+....+..|. .|.... +..+....+. ...|++++=.. ...-|+.
T Consensus 4 ~~Ilivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~al~~~~~~~~dlvl~D~~l~~~~g~~ 64 (132)
T 3crn_A 4 KRILIVDDDTA-----------ILDSTKQILEFEGY--EVEIAA------TAGEGLAKIENEFFNLALFXIKLPDMEGTE 64 (132)
T ss_dssp CEEEEECSCHH-----------HHHHHHHHHHHTTC--EEEEES------SHHHHHHHHHHSCCSEEEECSBCSSSBHHH
T ss_pred cEEEEEeCCHH-----------HHHHHHHHHHHCCc--eEEEeC------CHHHHHHHHhcCCCCEEEEecCCCCCchHH
Confidence 46777776543 34556666666543 344332 2345555443 23577776432 2345777
Q ss_pred HHHHHH---cCCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 642 VIEAMN---CGLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 642 vlEAMa---~GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
+++.+. .++|+|. |.... ..+.+..|..||+..|.+.+++.++|...+
T Consensus 65 ~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~ 119 (132)
T 3crn_A 65 LLEKAHKLRPGMKKIMVTGYASLENSVFSLNAGADAYIMKPVNPRDLLEKIKEKL 119 (132)
T ss_dssp HHHHHHHHCTTSEEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCCcEEEEeccccHHHHHHHHhccchhhccCCCCHHHHHHHHHHHH
Confidence 777664 3678776 44433 234456788999999999999999986544
No 153
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=23.64 E-value=3.2e+02 Score=22.75 Aligned_cols=76 Identities=4% Similarity=0.017 Sum_probs=50.0
Q ss_pred hHHHHHHHH-ccCcEEEECCC-CCCCcHHHHHHHHc-----CCcEEE-cCccc--cccccccCceEEEECCCCHHHHHHH
Q 036539 615 NGELYRCIA-DTKGAFVQPAL-YEAFGLTVIEAMNC-----GLPTFA-TNQGG--PAEIIVDGVSGFHIDPYNGDESSDK 684 (749)
Q Consensus 615 ~~el~~~la-~aadvfV~PS~-~E~fGLtvlEAMa~-----GlPVVa-t~~GG--~~EiI~dg~~G~lv~p~d~e~lA~a 684 (749)
..+....+. ...|++++=.. .+.-|+.+++.+.. .+|+|. |.... ..+.+..|..+|+..|-+.+++.++
T Consensus 36 ~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 115 (133)
T 3nhm_A 36 GASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVKPVKPPVLIAQ 115 (133)
T ss_dssp HHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEESSCCHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEeccCCHHHHHHH
Confidence 445555543 33577776433 45567888877764 678887 33222 2345567888999999999999999
Q ss_pred HHHHHH
Q 036539 685 IADFFE 690 (749)
Q Consensus 685 I~~~l~ 690 (749)
|..++.
T Consensus 116 i~~~l~ 121 (133)
T 3nhm_A 116 LHALLA 121 (133)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 977664
No 154
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=23.48 E-value=3.3e+02 Score=22.88 Aligned_cols=75 Identities=12% Similarity=0.117 Sum_probs=48.7
Q ss_pred hHHHHHHHH-ccCcEEEECCC-CCCCcHHHHHHHHc---CCcEEE-cCccc---cccccccCceEEEECCCCHHHHHHHH
Q 036539 615 NGELYRCIA-DTKGAFVQPAL-YEAFGLTVIEAMNC---GLPTFA-TNQGG---PAEIIVDGVSGFHIDPYNGDESSDKI 685 (749)
Q Consensus 615 ~~el~~~la-~aadvfV~PS~-~E~fGLtvlEAMa~---GlPVVa-t~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI 685 (749)
..+....+. ...|++++=.. ...-|+.+++.+.. .+|+|. |.... ..+.+..|..||+..|.+.+++.++|
T Consensus 38 ~~~al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i 117 (133)
T 3b2n_A 38 GLDAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVDAYVLKERSIEELVETI 117 (133)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHHH
T ss_pred HHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHH
Confidence 344555443 23688776433 23457777777653 578776 44333 34445678899999999999999998
Q ss_pred HHHH
Q 036539 686 ADFF 689 (749)
Q Consensus 686 ~~~l 689 (749)
...+
T Consensus 118 ~~~~ 121 (133)
T 3b2n_A 118 NKVN 121 (133)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 155
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=23.31 E-value=2.7e+02 Score=23.01 Aligned_cols=106 Identities=9% Similarity=0.138 Sum_probs=63.7
Q ss_pred EEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCC-CCCCcHHH
Q 036539 565 NLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPAL-YEAFGLTV 642 (749)
Q Consensus 565 ~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~-~E~fGLtv 642 (749)
+++|+.+.+. ..+.+....++.|. .|.... +..+..+.+.. ..|++++=.. .+.-|+.+
T Consensus 4 ~ilivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~al~~~~~~~~dlii~D~~~p~~~g~~~ 64 (120)
T 3f6p_A 4 KILVVDDEKP-----------IADILEFNLRKEGY--EVHCAH------DGNEAVEMVEELQPDLILLDIMLPNKDGVEV 64 (120)
T ss_dssp EEEEECSCHH-----------HHHHHHHHHHHTTC--EEEEES------SHHHHHHHHHTTCCSEEEEETTSTTTHHHHH
T ss_pred eEEEEECCHH-----------HHHHHHHHHHhCCE--EEEEeC------CHHHHHHHHhhCCCCEEEEeCCCCCCCHHHH
Confidence 5666665533 24556666666553 344322 24455555542 3577665332 34457777
Q ss_pred HHHHH--cCCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 643 IEAMN--CGLPTFA-TNQGGP---AEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 643 lEAMa--~GlPVVa-t~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
++.+. .++|+|. |..+.. .+.+..|..+|+..|.+.+++..+|...+
T Consensus 65 ~~~lr~~~~~~ii~~t~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~l 117 (120)
T 3f6p_A 65 CREVRKKYDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANL 117 (120)
T ss_dssp HHHHHTTCCSCEEEEEESSCHHHHHHHHHTTCCEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCEEEEECCCChHHHHHHHhCCcceeEcCCCCHHHHHHHHHHHH
Confidence 77664 3678876 333332 33456788999999999999999986543
No 156
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=23.21 E-value=72 Score=32.26 Aligned_cols=34 Identities=15% Similarity=0.269 Sum_probs=18.3
Q ss_pred cccCCceeecccccCCHHHHHHHHHHHHHHhccCCC
Q 036539 147 LDHQGEKLMINDNLNTAEKLQMALIVAEVSLSTLPK 182 (749)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (749)
|+|+.-..+++++|.|.++++..+. .-.|..+|.
T Consensus 6 ~~~~~~~~~~~~~i~~~~~ie~~~~--~p~lg~iP~ 39 (271)
T 3bfv_A 6 HHHHHGSVIFDKRIKDEEDVEKELG--LPVLGSIQK 39 (271)
T ss_dssp ----------CCCCCSHHHHHHHHC--CCEEEEEEC
T ss_pred cccccccEEeeCcCCCHHHHHHHhC--CCeEEEecc
Confidence 4445557899999999999887653 456666665
No 157
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=23.18 E-value=89 Score=26.94 Aligned_cols=35 Identities=11% Similarity=0.245 Sum_probs=23.0
Q ss_pred CceeEEEEEcccccCCCcccCCCCCcCcceehhHHHHHHHHHHHHHHHHHcCCccc
Q 036539 236 PILFNVVIFSPHGYFGQADVLGLPDTGGQVVYILDQVKALEEELLLRIKQQGLYIK 291 (749)
Q Consensus 236 pm~~rIvivs~h~~~~~~~~~g~p~tGG~~vyvld~araL~~eLa~~L~~~G~eV~ 291 (749)
|..|||++++..|. |.. .+. +.|-+.+.+.|+++.
T Consensus 2 ~~~mkIlvvC~~G~-------------~TS-ll~-------~kl~~~~~~~gi~~~ 36 (109)
T 2l2q_A 2 PGSMNILLVCGAGM-------------STS-MLV-------QRIEKYAKSKNINAT 36 (109)
T ss_dssp CCCEEEEEESSSSC-------------SSC-HHH-------HHHHHHHHHHTCSEE
T ss_pred CCceEEEEECCChH-------------hHH-HHH-------HHHHHHHHHCCCCeE
Confidence 44589999997664 333 211 255667888999876
No 158
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=23.04 E-value=40 Score=32.22 Aligned_cols=19 Identities=16% Similarity=0.281 Sum_probs=15.5
Q ss_pred HHHHHHHHcCCcccceEEEEeCC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
.+++.|.++|++|. ++++.
T Consensus 15 ~l~~~L~~~g~~V~----~~~R~ 33 (224)
T 3h2s_A 15 AIVAEARRRGHEVL----AVVRD 33 (224)
T ss_dssp HHHHHHHHTTCEEE----EEESC
T ss_pred HHHHHHHHCCCEEE----EEEec
Confidence 66678899999998 88775
No 159
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=22.94 E-value=1.2e+02 Score=31.62 Aligned_cols=94 Identities=10% Similarity=-0.018 Sum_probs=57.7
Q ss_pred cEEEEEe--cccCCCCHHHHHHHHHHhHc---cCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEec
Q 036539 533 PIIFSMA--RLDVVKNLTGLTEWYGKNKR---LRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIA 607 (749)
Q Consensus 533 ~vIl~vG--RL~~~Kgl~~LieA~~~l~~---~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG 607 (749)
..|..+| ++.. .-++++..++. ....++++-|.+... +..++.+++++.. .+..
T Consensus 7 lrvgiIG~G~ig~-----~h~~~~~~~~~~~~~~~~~~l~av~d~~~-------------~~a~~~a~~~g~~---~~~~ 65 (390)
T 4h3v_A 7 LGIGLIGYAFMGA-----AHSQAWRSAPRFFDLPLHPDLNVLCGRDA-------------EAVRAAAGKLGWS---TTET 65 (390)
T ss_dssp EEEEEECHHHHHH-----HHHHHHHHHHHHSCCSSEEEEEEEECSSH-------------HHHHHHHHHHTCS---EEES
T ss_pred CcEEEEcCCHHHH-----HHHHHHHhCccccccccCceEEEEEcCCH-------------HHHHHHHHHcCCC---cccC
Confidence 4566665 3321 23555555543 233457777766533 5667788888763 2222
Q ss_pred CccCcCChHHHHHHHHc-cCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC
Q 036539 608 AQSDRLRNGELYRCIAD-TKGAFVQPALYEAFGLTVIEAMNCGLPTFATN 656 (749)
Q Consensus 608 ~~~~~~~~~el~~~la~-aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~ 656 (749)
++..++++ ..|+++..+....-.-.+++|+.+|++|++-.
T Consensus 66 ---------d~~~ll~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~EK 106 (390)
T 4h3v_A 66 ---------DWRTLLERDDVQLVDVCTPGDSHAEIAIAALEAGKHVLCEK 106 (390)
T ss_dssp ---------CHHHHTTCTTCSEEEECSCGGGHHHHHHHHHHTTCEEEEES
T ss_pred ---------CHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHcCCCceeec
Confidence 23444442 36888887766655667899999999999864
No 160
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=22.93 E-value=44 Score=34.47 Aligned_cols=19 Identities=11% Similarity=0.060 Sum_probs=15.4
Q ss_pred HHHHHHHHcCCcccceEEEEeCC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
.++..|++.|++|+ ++++.
T Consensus 16 ~~a~~L~~~g~~V~----~~~r~ 34 (312)
T 3hn2_A 16 YYGALLQRSGEDVH----FLLRR 34 (312)
T ss_dssp HHHHHHHHTSCCEE----EECST
T ss_pred HHHHHHHHCCCeEE----EEEcC
Confidence 56677899999998 88774
No 161
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=22.85 E-value=2.2e+02 Score=27.74 Aligned_cols=19 Identities=11% Similarity=0.039 Sum_probs=15.2
Q ss_pred HHHHHHHHcCCcccceEEEEeCC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
.+++.|+++|++|. ++.+.
T Consensus 22 aia~~l~~~G~~V~----~~~r~ 40 (257)
T 3tpc_A 22 AVTRMLAQEGATVL----GLDLK 40 (257)
T ss_dssp HHHHHHHHTTCEEE----EEESS
T ss_pred HHHHHHHHCCCEEE----EEeCC
Confidence 67788999999886 76655
No 162
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=22.67 E-value=3.5e+02 Score=22.83 Aligned_cols=108 Identities=13% Similarity=0.212 Sum_probs=65.2
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH------ccCcEEEECCC-CC
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA------DTKGAFVQPAL-YE 636 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la------~aadvfV~PS~-~E 636 (749)
.+++||.+.+. ..+.+....+..|.. .|.... +..+....+. ...|++++=-. ..
T Consensus 3 ~~ILivdD~~~-----------~~~~l~~~L~~~g~~-~v~~~~------~~~~al~~~~~~~~~~~~~dlvllD~~mp~ 64 (133)
T 2r25_B 3 VKILVVEDNHV-----------NQEVIKRMLNLEGIE-NIELAC------DGQEAFDKVKELTSKGENYNMIFMDVQMPK 64 (133)
T ss_dssp SCEEEECSCHH-----------HHHHHHHHHHHTTCC-CEEEES------SHHHHHHHHHHHHHHTCCCSEEEECSCCSS
T ss_pred ceEEEEcCCHH-----------HHHHHHHHHHHcCCc-eEEEEC------CHHHHHHHHHHHHhcCCCCCEEEEeCCCCC
Confidence 35666665533 345566666655432 344432 2345555543 23588776432 34
Q ss_pred CCcHHHHHHHHc----CCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 637 AFGLTVIEAMNC----GLPTFA-TNQGGP---AEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 637 ~fGLtvlEAMa~----GlPVVa-t~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
.-|+.+++.+.. ..|+|. |..+.. .+.+..|..||+..|-+.+++.++|.+++
T Consensus 65 ~~G~~~~~~lr~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~l~~~~ 125 (133)
T 2r25_B 65 VDGLLSTKMIRRDLGYTSPIVALTAFADDSNIKECLESGMNGFLSKPIKRPKLKTILTEFC 125 (133)
T ss_dssp SCHHHHHHHHHHHSCCCSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHC
T ss_pred CChHHHHHHHHhhcCCCCCEEEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHH
Confidence 467888777753 468776 544443 34456788999999999999999986543
No 163
>3ikm_A DNA polymerase subunit gamma-1; human mitochondrial DNA polymerase, disease mutation, DNA replication, DNA-binding, DNA-directed DNA polymerase; HET: DNA; 3.24A {Homo sapiens}
Probab=22.64 E-value=63 Score=39.25 Aligned_cols=79 Identities=16% Similarity=0.274 Sum_probs=53.3
Q ss_pred chhhhhhhhhhcccCCCCC------CchHHHHHhhcccCCceeecccccC---------CH---------HHHHHHHHHH
Q 036539 118 GISFVSKFVTAKLSGRQDC------AQPLVDYLLSLDHQGEKLMINDNLN---------TA---------EKLQMALIVA 173 (749)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---------~~---------~~~~~~~~~~ 173 (749)
|||.|.++|-+|+|.+... ++.-.+.|+.|.+.|+.--+..-|. |+ .+...-+..|
T Consensus 6 giQmLS~~Lh~QiF~~~~~~~~~~~v~~s~~hL~~H~L~gk~t~~~p~v~~~LP~L~G~nldEHF~~lg~~~s~PYl~~a 85 (1172)
T 3ikm_A 6 DIQMLSRGLHEQIFGQGGEMPGEAAVRRSVEHLQKHGLWGQPAVPLPDVELRLPPLYGDNLDQHFRLLAQKQSLPYLEAA 85 (1172)
T ss_dssp SSSCCCSSHHHHSCSSCCCCCTHHHHHHHHHTTTTTTCCSSSCCCCCCCCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhcCHHHHHhhCCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCCCCCCCCcCCCcCCCCHHHHHHHHHHHHhHHHHHHH
Confidence 8999999999999965421 3444578899999988754443332 11 2334456777
Q ss_pred HHHhccCCCCCChhhHHHHHhhcCCccccCc
Q 036539 174 EVSLSTLPKDTPYQKFELRFKEWGFEKGWGH 204 (749)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (749)
.+++..-.|..| ++|=|.+||-.
T Consensus 86 ~~~~~~~lP~~P--------~~W~~~~GWTr 108 (1172)
T 3ikm_A 86 NLLLQAQLPPKP--------PAWAWAEGWTR 108 (1172)
T ss_dssp HHHHHCCCCCCC--------CSCCCSSCCCC
T ss_pred HHHHhcCCCCCC--------cCccccCCeee
Confidence 777765445556 68899999943
No 164
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=22.61 E-value=47 Score=32.27 Aligned_cols=69 Identities=17% Similarity=0.192 Sum_probs=39.7
Q ss_pred HHHHHHHccCcEEEECCCCCCCcH--HHHHHHHcCCcEEEcCc-ccccccc----ccC------ceEEEECCCCHHHHHH
Q 036539 617 ELYRCIADTKGAFVQPALYEAFGL--TVIEAMNCGLPTFATNQ-GGPAEII----VDG------VSGFHIDPYNGDESSD 683 (749)
Q Consensus 617 el~~~la~aadvfV~PS~~E~fGL--tvlEAMa~GlPVVat~~-GG~~EiI----~dg------~~G~lv~p~d~e~lA~ 683 (749)
+=-+.+...+|++|..- -++|. .+.||+..|+||++-+. |...+.+ .+| ....+.-..|++++.+
T Consensus 110 ~Rk~~m~~~sda~Ivlp--GG~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~~~~~~~i~~~~~~ee~~~ 187 (195)
T 1rcu_A 110 MRSFVLLRNADVVVSIG--GEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEEAVQ 187 (195)
T ss_dssp HHHHHHHTTCSEEEEES--CCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEEESSHHHHHH
T ss_pred HHHHHHHHhCCEEEEec--CCCcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCCHHHcCeEEEeCCHHHHHH
Confidence 33445555677766531 34664 47899999999999864 3333222 221 1112222348888877
Q ss_pred HHHH
Q 036539 684 KIAD 687 (749)
Q Consensus 684 aI~~ 687 (749)
.|.+
T Consensus 188 ~l~~ 191 (195)
T 1rcu_A 188 IIEQ 191 (195)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 7743
No 165
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=22.51 E-value=1.5e+02 Score=30.81 Aligned_cols=95 Identities=12% Similarity=-0.016 Sum_probs=57.4
Q ss_pred CcEEEEEe--cccCCCCHHHHHHHHHHh---HccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEe
Q 036539 532 KPIIFSMA--RLDVVKNLTGLTEWYGKN---KRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWI 606 (749)
Q Consensus 532 k~vIl~vG--RL~~~Kgl~~LieA~~~l---~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~fl 606 (749)
+..|..+| ++.. .-++++..+ ....++++++-|.+... +..++++++++.. .+.
T Consensus 25 kirvgiIG~G~ig~-----~H~~a~~~~~~~~~~~~~~~lvav~d~~~-------------~~a~~~a~~~g~~---~~y 83 (393)
T 4fb5_A 25 PLGIGLIGTGYMGK-----CHALAWNAVKTVFGDVERPRLVHLAEANA-------------GLAEARAGEFGFE---KAT 83 (393)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHTTHHHHHCSSCCCEEEEEECC---------------TTHHHHHHHHTCS---EEE
T ss_pred CccEEEEcCCHHHH-----HHHHHHHhhhhhhccCCCcEEEEEECCCH-------------HHHHHHHHHhCCC---eec
Confidence 44577776 3322 123343333 23446788887776543 3456778888763 232
Q ss_pred cCccCcCChHHHHHHHHc-cCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC
Q 036539 607 AAQSDRLRNGELYRCIAD-TKGAFVQPALYEAFGLTVIEAMNCGLPTFATN 656 (749)
Q Consensus 607 G~~~~~~~~~el~~~la~-aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~ 656 (749)
. ++.+++++ ..|+++..+....-.-.++.|+.+|++|++-.
T Consensus 84 ~---------d~~ell~~~~iDaV~IatP~~~H~~~a~~al~aGkhVl~EK 125 (393)
T 4fb5_A 84 A---------DWRALIADPEVDVVSVTTPNQFHAEMAIAALEAGKHVWCEK 125 (393)
T ss_dssp S---------CHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECS
T ss_pred C---------CHHHHhcCCCCcEEEECCChHHHHHHHHHHHhcCCeEEEcc
Confidence 2 23445543 36888887765555567899999999999863
No 166
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=22.35 E-value=38 Score=34.59 Aligned_cols=19 Identities=11% Similarity=0.113 Sum_probs=15.3
Q ss_pred HHHHHHHHcCCcccceEEEEeCC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
.++..|++.|++|+ ++++.
T Consensus 16 ~~a~~L~~~g~~V~----~~~r~ 34 (294)
T 3g17_A 16 TIAYELQQSLPHTT----LIGRH 34 (294)
T ss_dssp HHHHHHHHHCTTCE----EEESS
T ss_pred HHHHHHHHCCCeEE----EEEec
Confidence 45667888999998 88876
No 167
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=22.31 E-value=3.3e+02 Score=22.48 Aligned_cols=108 Identities=13% Similarity=0.172 Sum_probs=65.5
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCC-CCCCcHH
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPAL-YEAFGLT 641 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~-~E~fGLt 641 (749)
.+++|+.+.+. ..+.+....+..|. ..|.... +..+....+.. ..|++++=.. .+.-|+.
T Consensus 7 ~~ilivdd~~~-----------~~~~l~~~L~~~g~-~~v~~~~------~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~ 68 (129)
T 1p6q_A 7 IKVLIVDDQVT-----------SRLLLGDALQQLGF-KQITAAG------DGEQGMKIMAQNPHHLVISDFNMPKMDGLG 68 (129)
T ss_dssp CCEEEECSSHH-----------HHHHHHHHHHTTTC-SCEECCS------SHHHHHHHHHTSCCSEEEECSSSCSSCHHH
T ss_pred CeEEEEcCCHH-----------HHHHHHHHHHHCCC-cEEEecC------CHHHHHHHHHcCCCCEEEEeCCCCCCCHHH
Confidence 46777776543 24456666665443 2343322 24455555543 3577776433 3446778
Q ss_pred HHHHHHc-----CCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHH
Q 036539 642 VIEAMNC-----GLPTFA-TNQGGP---AEIIVDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 642 vlEAMa~-----GlPVVa-t~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
+++.+.. .+|+|. |..+.. .+.+..|..+|+..|.+.+++..+|...+
T Consensus 69 ~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~ 125 (129)
T 1p6q_A 69 LLQAVRANPATKKAAFIILTAQGDRALVQKAAALGANNVLAKPFTIEKMKAAIEAVF 125 (129)
T ss_dssp HHHHHTTCTTSTTCEEEECCSCCCHHHHHHHHHHTCSCEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHhcCccccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHH
Confidence 8887743 567776 443332 33455688899999999999999986654
No 168
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=22.12 E-value=2.5e+02 Score=26.17 Aligned_cols=71 Identities=15% Similarity=0.106 Sum_probs=38.3
Q ss_pred hhH-HHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHH----HHHHHccCcEEEECCC----CCCCcHHHHH---HHHc
Q 036539 581 REE-TAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGEL----YRCIADTKGAFVQPAL----YEAFGLTVIE---AMNC 648 (749)
Q Consensus 581 ~ee-~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el----~~~la~aadvfV~PS~----~E~fGLtvlE---AMa~ 648 (749)
.++ .+..+++.+.++++|+. .|.+.........++ ...+.+ ||++|.--. .+.=.-|..| |.+.
T Consensus 22 ~~e~~~~~~~l~~~l~~~G~~---v~~P~~~~~~~~~~i~~~d~~~i~~-aD~vVA~ldpf~g~~~D~GTafEiGyA~Al 97 (161)
T 2f62_A 22 PDMGASYYNKVRELLKKENVM---PLIPTDNEATEALDIRQKNIQMIKD-CDAVIADLSPFRGHEPDCGTAFEVGCAAAL 97 (161)
T ss_dssp TTTTHHHHHHHHHHHHTTTCE---EECTTTTCCSSHHHHHHHHHHHHHH-CSEEEEECCCCSSSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHCCCE---EECCCccCcchHHHHHHHHHHHHHh-CCEEEEEecCCCCCCCCCcHHHHHHHHHHC
Confidence 344 55666666667666542 233211110012222 456774 999886522 1233336666 6789
Q ss_pred CCcEEEc
Q 036539 649 GLPTFAT 655 (749)
Q Consensus 649 GlPVVat 655 (749)
|+|||+-
T Consensus 98 gKPVi~l 104 (161)
T 2f62_A 98 NKMVLTF 104 (161)
T ss_dssp TCEEEEE
T ss_pred CCEEEEE
Confidence 9999993
No 169
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=21.95 E-value=2.5e+02 Score=26.74 Aligned_cols=19 Identities=5% Similarity=0.029 Sum_probs=15.4
Q ss_pred HHHHHHHHcCCcccceEEEEeCC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
.+++.|.++|++|. ++.+.
T Consensus 14 ~la~~L~~~g~~v~----vid~~ 32 (218)
T 3l4b_C 14 YLARSMLSRKYGVV----IINKD 32 (218)
T ss_dssp HHHHHHHHTTCCEE----EEESC
T ss_pred HHHHHHHhCCCeEE----EEECC
Confidence 67778899999998 87754
No 170
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=21.76 E-value=1.6e+02 Score=27.79 Aligned_cols=93 Identities=5% Similarity=0.045 Sum_probs=59.3
Q ss_pred HHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCCCCCCcHHHHHHHHc---CCcEEE-cCcccc-
Q 036539 587 IKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPALYEAFGLTVIEAMNC---GLPTFA-TNQGGP- 660 (749)
Q Consensus 587 ~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~~E~fGLtvlEAMa~---GlPVVa-t~~GG~- 660 (749)
.+.+....+..|. .|.... +..+....+.. ..|++++| ..-|+.+++.+.. .+|+|. |.....
T Consensus 13 ~~~l~~~L~~~g~--~v~~~~------~~~~al~~l~~~~~dlvilp---~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~ 81 (223)
T 2hqr_A 13 GGEIEKGLNVKGF--MADVTE------SLEDGEYLMDIRNYDLVMVS---DKNALSFVSRIKEKHSSIVVLVSSDNPTSE 81 (223)
T ss_dssp HHHHHHHHGGGTC--CEEEES------SHHHHHHHHTTSCCSEEEEC---CTTHHHHHHHHHHHCTTSEEEEEESSCCHH
T ss_pred HHHHHHHHHHCCc--EEEEEC------CHHHHHHHHhcCCCCEEEeC---CCCHHHHHHHHHhCCCCCcEEEEECCCCHH
Confidence 4456666665543 344332 34455555543 35888844 4457777766643 788877 444332
Q ss_pred --ccccccCceEEEECCC-CHHHHHHHHHHHHH
Q 036539 661 --AEIIVDGVSGFHIDPY-NGDESSDKIADFFE 690 (749)
Q Consensus 661 --~EiI~dg~~G~lv~p~-d~e~lA~aI~~~l~ 690 (749)
.+.+..|..||+..|. +.+++..+|..++.
T Consensus 82 ~~~~~~~~Ga~~~l~Kp~~~~~~L~~~i~~~~~ 114 (223)
T 2hqr_A 82 EEVHAFEQGADDYIAKPYRSIKALVARIEARLR 114 (223)
T ss_dssp HHHHHHHHTCSEEEETTCSCTHHHHHHHHHHTS
T ss_pred HHHHHHHcCCCEEEECCCCCHHHHHHHHHHHhc
Confidence 3345678899999999 99999999977653
No 171
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=21.58 E-value=3.7e+02 Score=22.73 Aligned_cols=107 Identities=9% Similarity=0.102 Sum_probs=63.1
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc-cCcEEEECCC-CCCCcHH
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD-TKGAFVQPAL-YEAFGLT 641 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~-aadvfV~PS~-~E~fGLt 641 (749)
.+++|+.+.+. ..+.+....+..|. .|.... +..+....+.. ..|++++=.. .+.-|+.
T Consensus 4 ~~ILivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~al~~l~~~~~dlvi~D~~l~~~~g~~ 64 (138)
T 3c3m_A 4 YTILVVDDSPM-----------IVDVFVTMLERGGY--RPITAF------SGEECLEALNATPPDLVLLDIMMEPMDGWE 64 (138)
T ss_dssp CEEEEECSCHH-----------HHHHHHHHHHHTTC--EEEEES------SHHHHHHHHHHSCCSEEEEESCCSSSCHHH
T ss_pred ceEEEEeCCHH-----------HHHHHHHHHHHcCc--eEEEeC------CHHHHHHHHhccCCCEEEEeCCCCCCCHHH
Confidence 46777776543 34556666666543 344322 24455555542 3577775332 3456888
Q ss_pred HHHHHHc-----CCcEEE-cCcccccc-cc--ccCceEEEECCCCHHHHHHHHHHHH
Q 036539 642 VIEAMNC-----GLPTFA-TNQGGPAE-II--VDGVSGFHIDPYNGDESSDKIADFF 689 (749)
Q Consensus 642 vlEAMa~-----GlPVVa-t~~GG~~E-iI--~dg~~G~lv~p~d~e~lA~aI~~~l 689 (749)
+++.+.. .+|+|. |....... .. ..|..+|+..|.+.+++..+|...+
T Consensus 65 ~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~~ 121 (138)
T 3c3m_A 65 TLERIKTDPATRDIPVLMLTAKPLTPEEANEYGSYIEDYILKPTTHHQLYEAIEHVL 121 (138)
T ss_dssp HHHHHHHSTTTTTSCEEEEESSCCCHHHHHHTTTTCSEEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCcccCCCCEEEEECCCChHHHHHHhhcCHhheEeCCCCHHHHHHHHHHHH
Confidence 8888753 578876 44332222 11 2234699999999999999996654
No 172
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=21.29 E-value=2.9e+02 Score=22.75 Aligned_cols=106 Identities=14% Similarity=0.127 Sum_probs=61.9
Q ss_pred eEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECCC-CCCCcHH
Q 036539 564 VNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPAL-YEAFGLT 641 (749)
Q Consensus 564 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS~-~E~fGLt 641 (749)
.+++|+.+.+. ..+.+....+..|. .+.... +..+....+. ...|++++=.. ...-|+.
T Consensus 4 ~~ilivdd~~~-----------~~~~l~~~l~~~~~--~v~~~~------~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~ 64 (124)
T 1srr_A 4 EKILIVDDQSG-----------IRILLNEVFNKEGY--QTFQAA------NGLQALDIVTKERPDLVLLDMKIPGMDGIE 64 (124)
T ss_dssp CEEEEECSCHH-----------HHHHHHHHHHTTTC--EEEEES------SHHHHHHHHHHHCCSEEEEESCCTTCCHHH
T ss_pred ceEEEEeCCHH-----------HHHHHHHHHHHCCc--EEEEeC------CHHHHHHHHhccCCCEEEEecCCCCCCHHH
Confidence 35677766533 24455555655442 343322 2334444443 23677775332 2345677
Q ss_pred HHHHHH---cCCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHH
Q 036539 642 VIEAMN---CGLPTFA-TNQGGP---AEIIVDGVSGFHIDPYNGDESSDKIADF 688 (749)
Q Consensus 642 vlEAMa---~GlPVVa-t~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~ 688 (749)
+++.+. ..+|+|. |..+.. .+....|..|++..|.+.+++.++|..+
T Consensus 65 ~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~ 118 (124)
T 1srr_A 65 ILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKY 118 (124)
T ss_dssp HHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCCCEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEEEccCchHHHHHHHhcChHhhccCCCCHHHHHHHHHHH
Confidence 776664 4678876 443332 3344568889999999999999988543
No 173
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=21.19 E-value=2.1e+02 Score=29.43 Aligned_cols=92 Identities=7% Similarity=0.006 Sum_probs=57.2
Q ss_pred CcEEEEEe--cccCCCCHHHHHHHHHHhHccCCCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCc
Q 036539 532 KPIIFSMA--RLDVVKNLTGLTEWYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQ 609 (749)
Q Consensus 532 k~vIl~vG--RL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~ 609 (749)
...|..+| ++.. ...+.++.. .++++++-|.+... ++.++++++++.+ ....
T Consensus 23 mirigiIG~G~ig~----~~~~~~~~~----~~~~~lvav~d~~~-------------~~a~~~a~~~g~~---~~y~-- 76 (350)
T 4had_A 23 MLRFGIISTAKIGR----DNVVPAIQD----AENCVVTAIASRDL-------------TRAREMADRFSVP---HAFG-- 76 (350)
T ss_dssp CEEEEEESCCHHHH----HTHHHHHHH----CSSEEEEEEECSSH-------------HHHHHHHHHHTCS---EEES--
T ss_pred ccEEEEEcChHHHH----HHHHHHHHh----CCCeEEEEEECCCH-------------HHHHHHHHHcCCC---eeeC--
Confidence 34566666 2221 224455544 35788887766533 5667888898864 2222
Q ss_pred cCcCChHHHHHHHHc-cCcEEEECCCCCCCcHHHHHHHHcCCcEEEcC
Q 036539 610 SDRLRNGELYRCIAD-TKGAFVQPALYEAFGLTVIEAMNCGLPTFATN 656 (749)
Q Consensus 610 ~~~~~~~el~~~la~-aadvfV~PS~~E~fGLtvlEAMa~GlPVVat~ 656 (749)
++-+++++ ..|+++..+....-.-.+++|+.+|++|++-.
T Consensus 77 -------d~~ell~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~EK 117 (350)
T 4had_A 77 -------SYEEMLASDVIDAVYIPLPTSQHIEWSIKAADAGKHVVCEK 117 (350)
T ss_dssp -------SHHHHHHCSSCSEEEECSCGGGHHHHHHHHHHTTCEEEECS
T ss_pred -------CHHHHhcCCCCCEEEEeCCCchhHHHHHHHHhcCCEEEEeC
Confidence 23444543 36888888765555556789999999999853
No 174
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=20.86 E-value=50 Score=33.44 Aligned_cols=19 Identities=5% Similarity=0.114 Sum_probs=14.4
Q ss_pred HHHHHHHHcCCcccceEEEEeCC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
.++..|++.||+|. ++.+.
T Consensus 26 ~la~~l~~~g~~V~----~~~r~ 44 (286)
T 3c24_A 26 RITRKIHDSAHHLA----AIEIA 44 (286)
T ss_dssp HHHHHHHHSSSEEE----EECCS
T ss_pred HHHHHHHhCCCEEE----EEECC
Confidence 67778899999887 66543
No 175
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=20.63 E-value=4.8e+02 Score=24.95 Aligned_cols=91 Identities=18% Similarity=0.057 Sum_probs=53.4
Q ss_pred HHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHccCcEE-EECCCCCCC-cHHHHHHHHc---CCcEEEc---Ccccc
Q 036539 589 KMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGAF-VQPALYEAF-GLTVIEAMNC---GLPTFAT---NQGGP 660 (749)
Q Consensus 589 ~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~aadvf-V~PS~~E~f-GLtvlEAMa~---GlPVVat---~~GG~ 660 (749)
.+.+.++++|.+ .+.| -.+..|+.+.....+|.+ ++| .+.. |+..+.++.. .+|++++ +....
T Consensus 95 ~v~~~~~~~g~~---~i~G----~~t~~e~~~A~~~Gad~v~~fp--a~~~gG~~~lk~l~~~~~~ipvvaiGGI~~~n~ 165 (207)
T 2yw3_A 95 EVAALAQARGVP---YLPG----VLTPTEVERALALGLSALKFFP--AEPFQGVRVLRAYAEVFPEVRFLPTGGIKEEHL 165 (207)
T ss_dssp HHHHHHHHHTCC---EEEE----ECSHHHHHHHHHTTCCEEEETT--TTTTTHHHHHHHHHHHCTTCEEEEBSSCCGGGH
T ss_pred HHHHHHHHhCCC---EEec----CCCHHHHHHHHHCCCCEEEEec--CccccCHHHHHHHHhhCCCCcEEEeCCCCHHHH
Confidence 455556666643 3456 334677777777667865 445 3667 8787777653 7899986 12234
Q ss_pred ccccccCceEEEE-----CCCCHHHHHHHHHHHH
Q 036539 661 AEIIVDGVSGFHI-----DPYNGDESSDKIADFF 689 (749)
Q Consensus 661 ~EiI~dg~~G~lv-----~p~d~e~lA~aI~~~l 689 (749)
.+++..|..|+.+ . .|++++.++..++.
T Consensus 166 ~~~l~aGa~~vavgSai~~-~d~~~i~~~a~~~~ 198 (207)
T 2yw3_A 166 PHYAALPNLLAVGGSWLLQ-GNLEAVRAKVRAAK 198 (207)
T ss_dssp HHHHTCSSBSCEEESGGGS-SCHHHHHHHHHHHH
T ss_pred HHHHhCCCcEEEEehhhhC-CCHHHHHHHHHHHH
Confidence 5566655544433 3 56555555554443
No 176
>3qay_A Endolysin; amidase A/B fold, lyase; 2.00A {Clostridium phage PHICD27}
Probab=20.54 E-value=1.5e+02 Score=27.98 Aligned_cols=53 Identities=19% Similarity=0.234 Sum_probs=34.1
Q ss_pred eEEEEEcccccCCCcccCCC-C-CcCcceehhHHHHHHHHHHHHHHHHHcCCcccceEEEEeCC
Q 036539 239 FNVVIFSPHGYFGQADVLGL-P-DTGGQVVYILDQVKALEEELLLRIKQQGLYIKPQIVVVTRL 300 (749)
Q Consensus 239 ~rIvivs~h~~~~~~~~~g~-p-~tGG~~vyvld~araL~~eLa~~L~~~G~eV~~~i~V~T~~ 300 (749)
|+|+|=.-||-.. +|. + ..|| +.=.|...+++..|.+.|.+.|++|. +++||.
T Consensus 2 m~IviDpGHGG~D----~G~~~ga~g~--~~Ekdi~l~ia~~l~~~L~~~G~~V~---v~ltR~ 56 (180)
T 3qay_A 2 MKICITVGHSILK----SGACTSADGV--VNEYQYNKSLAPVLADTFRKEGHKVD---VIICPE 56 (180)
T ss_dssp CEEEEEECCCBCT----TSCBCSCBSS--SBHHHHHHHHHHHHHHHHHHTTCEEE---EECCCS
T ss_pred eEEEEECCCCCCC----CCCcCCCCCC--ccHHHHHHHHHHHHHHHHHhcCCcce---EEECCC
Confidence 7899888898532 221 1 1233 33445566666688899999999973 156664
No 177
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=20.29 E-value=2.3e+02 Score=24.91 Aligned_cols=107 Identities=8% Similarity=-0.034 Sum_probs=64.3
Q ss_pred CeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHH-ccCcEEEECCC-CCCCcH
Q 036539 563 LVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIA-DTKGAFVQPAL-YEAFGL 640 (749)
Q Consensus 563 ~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la-~aadvfV~PS~-~E~fGL 640 (749)
..+++||-+.+. ....+....++.|.. |... ..+-.+..+.+. ...|+.++=-. ...-|+
T Consensus 8 ~~rILiVdD~~~-----------~~~~l~~~L~~~G~~--v~~~-----a~~g~eAl~~~~~~~~DlvllDi~mP~~~G~ 69 (123)
T 2lpm_A 8 RLRVLVVEDESM-----------IAMLIEDTLCELGHE--VAAT-----ASRMQEALDIARKGQFDIAIIDVNLDGEPSY 69 (123)
T ss_dssp CCCEEEESSSTT-----------TSHHHHHHHHHHCCC--CCBC-----SCCHHHHHHHHHHCCSSEEEECSSSSSCCSH
T ss_pred CCEEEEEeCCHH-----------HHHHHHHHHHHCCCE--EEEE-----ECCHHHHHHHHHhCCCCEEEEecCCCCCCHH
Confidence 357788877765 134566666666642 2111 112334444443 33577765322 345677
Q ss_pred HHHHHHH-cCCcEEE-cCccccccccccCceEEEECCCCHHHHHHHHHH
Q 036539 641 TVIEAMN-CGLPTFA-TNQGGPAEIIVDGVSGFHIDPYNGDESSDKIAD 687 (749)
Q Consensus 641 tvlEAMa-~GlPVVa-t~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ 687 (749)
.+++.+. .++|||. |..+.......-|..||+..|-+++++.++|.+
T Consensus 70 el~~~lr~~~ipvI~lTa~~~~~~~~~~g~~~yl~KP~~~~~L~~~l~~ 118 (123)
T 2lpm_A 70 PVADILAERNVPFIFATGYGSKGLDTRYSNIPLLTKPFLDSELEAVLVQ 118 (123)
T ss_dssp HHHHHHHHTCCSSCCBCTTCTTSCCSSSCSCSCBCSSSSHHHHHHHHST
T ss_pred HHHHHHHcCCCCEEEEecCccHHHHHhCCCCcEEECCCCHHHHHHHHHH
Confidence 7777663 5789876 555443334455778899999999999888843
No 178
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=20.27 E-value=4.1e+02 Score=27.58 Aligned_cols=18 Identities=22% Similarity=0.420 Sum_probs=13.7
Q ss_pred HHHHHHHHcCCcccceEEEEeC
Q 036539 278 ELLLRIKQQGLYIKPQIVVVTR 299 (749)
Q Consensus 278 eLa~~L~~~G~eV~~~i~V~T~ 299 (749)
++++.+++.|++|. ++..
T Consensus 25 ~~~~a~~~~G~~v~----~~~~ 42 (391)
T 1kjq_A 25 EVAIECQRLGVEVI----AVDR 42 (391)
T ss_dssp HHHHHHHTTTCEEE----EEES
T ss_pred HHHHHHHHcCCEEE----EEEC
Confidence 66778899999886 6554
No 179
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=20.24 E-value=3.9e+02 Score=22.46 Aligned_cols=106 Identities=7% Similarity=0.050 Sum_probs=62.2
Q ss_pred CCeEEEEEeccCCCCCCcchhHHHHHHHHHHHHHHcCCCCcEEEecCccCcCChHHHHHHHHc--cCcEEEECCC-CCCC
Q 036539 562 NLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIAD--TKGAFVQPAL-YEAF 638 (749)
Q Consensus 562 ~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~L~~~V~flG~~~~~~~~~el~~~la~--aadvfV~PS~-~E~f 638 (749)
+..+++|+.+.+. ..+.+....+..|. +|.... +..+....+.. ..|++++=.. .+.-
T Consensus 14 ~~~~ilivdd~~~-----------~~~~l~~~L~~~g~--~v~~~~------~~~~al~~l~~~~~~dlvilD~~l~~~~ 74 (138)
T 2b4a_A 14 QPFRVTLVEDEPS-----------HATLIQYHLNQLGA--EVTVHP------SGSAFFQHRSQLSTCDLLIVSDQLVDLS 74 (138)
T ss_dssp CCCEEEEECSCHH-----------HHHHHHHHHHHTTC--EEEEES------SHHHHHHTGGGGGSCSEEEEETTCTTSC
T ss_pred CCCeEEEECCCHH-----------HHHHHHHHHHHcCC--EEEEeC------CHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence 3567777776643 34556666666553 344332 23455555442 3677775433 3446
Q ss_pred cHHHHHHHHc---CCcEEE-c-CccccccccccCceEEEECCCCHHHHHHHHHH
Q 036539 639 GLTVIEAMNC---GLPTFA-T-NQGGPAEIIVDGVSGFHIDPYNGDESSDKIAD 687 (749)
Q Consensus 639 GLtvlEAMa~---GlPVVa-t-~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ 687 (749)
|+.+++.+.. .+|+|. | ....... ...-..+++..|.+.+++..+|..
T Consensus 75 g~~~~~~l~~~~~~~~ii~ls~~~~~~~~-~~~~~~~~l~KP~~~~~L~~~i~~ 127 (138)
T 2b4a_A 75 IFSLLDIVKEQTKQPSVLILTTGRHELIE-SSEHNLSYLQKPFAISELRAAIDY 127 (138)
T ss_dssp HHHHHHHHTTSSSCCEEEEEESCC--CCC-CSSSCEEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCEEEEECCCCCHHH-HHHHHHheeeCCCCHHHHHHHHHH
Confidence 7788887754 577776 4 3333322 111168999999999999998854
Done!