Query 036540
Match_columns 562
No_of_seqs 232 out of 1666
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 04:24:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036540.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036540hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 1.6E-99 5E-104 821.4 54.6 510 28-562 1-538 (552)
2 3sqr_A Laccase; multicopper ox 100.0 4E-95 1.4E-99 779.4 53.2 464 27-545 64-545 (580)
3 1v10_A Laccase; multicopper bl 100.0 5.5E-93 1.9E-97 763.6 44.8 478 25-562 18-508 (521)
4 1zpu_A Iron transport multicop 100.0 2.2E-92 7.7E-97 759.5 47.7 477 29-562 1-500 (534)
5 3pxl_A Laccase; 4-copper prote 100.0 3.7E-92 1.3E-96 748.4 48.7 458 30-544 3-471 (499)
6 3t6v_A Laccase; beta barrel, o 100.0 3.9E-92 1.3E-96 748.4 46.0 457 30-544 4-471 (495)
7 2q9o_A Laccase-1; multicopper 100.0 3.7E-90 1.3E-94 746.9 44.8 471 26-545 29-522 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 9.4E-90 3.2E-94 736.1 41.5 469 31-562 5-487 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 9.2E-83 3.1E-87 671.9 41.8 406 26-543 12-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 2.1E-82 7.2E-87 669.7 35.2 406 29-546 17-443 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 9.9E-81 3.4E-85 667.6 42.7 420 30-546 36-477 (534)
12 2wsd_A Spore coat protein A; o 100.0 7.4E-80 2.5E-84 661.1 43.5 430 29-544 24-510 (513)
13 3zx1_A Oxidoreductase, putativ 100.0 1.6E-78 5.6E-83 639.4 42.6 417 26-543 46-480 (481)
14 3aw5_A Multicopper oxidase; be 100.0 1.2E-78 4.2E-83 639.9 31.6 395 30-543 20-448 (448)
15 3gyr_A PHS, phenoxazinone synt 100.0 2E-77 6.7E-82 661.1 41.8 464 27-547 29-594 (612)
16 3od3_A Blue copper oxidase CUE 100.0 2.8E-76 9.6E-81 621.9 38.0 422 28-542 15-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 5E-75 1.7E-79 627.4 44.9 439 28-546 30-593 (612)
18 3g5w_A Multicopper oxidase typ 100.0 1.7E-53 5.7E-58 428.6 32.0 271 29-314 1-278 (318)
19 2r7e_A Coagulation factor VIII 100.0 2.2E-55 7.4E-60 486.7 16.6 237 34-292 50-314 (742)
20 2j5w_A Ceruloplasmin, ferroxid 100.0 5.8E-52 2E-56 477.8 38.2 271 24-315 15-359 (1065)
21 2zwn_A Two-domain type laccase 100.0 6.1E-52 2.1E-56 421.9 33.6 271 29-314 2-279 (339)
22 3tas_A Small laccase, multi-co 100.0 1.6E-49 5.4E-54 399.4 26.8 186 24-253 7-212 (313)
23 2dv6_A Nitrite reductase; elec 100.0 2.1E-49 7.3E-54 420.2 27.8 399 26-547 24-436 (447)
24 3cg8_A Laccase; oxidoreductase 100.0 8.9E-49 3.1E-53 398.0 25.7 158 2-170 4-197 (343)
25 1kbv_A ANIA, major outer membr 100.0 1.7E-48 5.9E-53 394.5 27.6 268 26-315 34-310 (327)
26 3gdc_A Multicopper oxidase; be 100.0 7.3E-48 2.5E-52 383.0 29.9 236 26-291 30-272 (288)
27 2j5w_A Ceruloplasmin, ferroxid 100.0 2.5E-46 8.7E-51 430.9 20.2 400 47-547 616-1061(1065)
28 3kw8_A Laccase, putative coppe 100.0 2.6E-45 8.8E-50 362.4 23.4 223 25-291 2-249 (276)
29 3t9w_A Small laccase, multi-co 100.0 6.9E-45 2.4E-49 362.7 22.3 223 26-291 25-271 (299)
30 2zoo_A Probable nitrite reduct 100.0 4.1E-44 1.4E-48 378.8 28.9 268 26-315 24-300 (442)
31 1mzy_A Copper-containing nitri 100.0 3.8E-43 1.3E-47 357.2 28.5 271 26-315 28-321 (333)
32 1oe1_A Dissimilatory copper-co 100.0 1.6E-42 5.5E-47 353.2 25.4 270 26-315 28-321 (336)
33 2bw4_A Copper-containing nitri 100.0 9.3E-43 3.2E-47 355.5 23.3 270 26-315 34-327 (340)
34 2dv6_A Nitrite reductase; elec 100.0 5.3E-39 1.8E-43 340.4 31.6 259 28-314 161-435 (447)
35 1sdd_B Coagulation factor V; c 100.0 2.2E-40 7.5E-45 365.6 20.9 220 55-291 63-311 (647)
36 1sdd_A Coagulation factor V; c 100.0 2.8E-41 9.7E-46 338.5 8.0 214 49-292 49-285 (306)
37 2r7e_B Coagulation factor VIII 100.0 3.5E-40 1.2E-44 365.6 10.7 251 26-291 129-440 (770)
38 2r7e_A Coagulation factor VIII 100.0 2.3E-37 7.9E-42 342.6 6.0 218 57-292 448-696 (742)
39 3gdc_A Multicopper oxidase; be 100.0 8.8E-30 3E-34 252.8 16.7 232 194-543 55-287 (288)
40 2zwn_A Two-domain type laccase 100.0 5.2E-28 1.8E-32 245.7 18.8 241 194-546 24-279 (339)
41 3g5w_A Multicopper oxidase typ 100.0 2.1E-28 7.1E-33 245.9 14.6 243 194-546 23-278 (318)
42 3kw8_A Laccase, putative coppe 100.0 6.1E-28 2.1E-32 238.0 17.2 226 196-547 27-268 (276)
43 3t9w_A Small laccase, multi-co 100.0 1.6E-27 5.6E-32 237.2 18.6 218 213-547 57-290 (299)
44 1sdd_A Coagulation factor V; c 99.9 3.2E-25 1.1E-29 221.9 2.6 237 196-545 52-301 (306)
45 1kbv_A ANIA, major outer membr 99.9 4.1E-22 1.4E-26 201.2 17.6 250 194-547 59-310 (327)
46 2bw4_A Copper-containing nitri 99.9 1.4E-21 4.9E-26 198.9 21.5 94 438-547 231-327 (340)
47 1sdd_B Coagulation factor V; c 99.9 5.1E-22 1.7E-26 219.0 17.5 230 214-544 69-327 (647)
48 1mzy_A Copper-containing nitri 99.8 5.7E-20 1.9E-24 186.4 21.6 94 438-547 225-321 (333)
49 2r7e_B Coagulation factor VIII 99.8 2E-22 6.8E-27 223.5 3.0 245 213-543 198-455 (770)
50 1oe1_A Dissimilatory copper-co 99.8 9.6E-19 3.3E-23 177.7 22.9 276 194-560 54-335 (336)
51 2uxt_A Protein SUFI, SUFI; oxi 99.8 2.7E-18 9.2E-23 180.7 24.0 236 30-291 152-425 (451)
52 2zoo_A Probable nitrite reduct 99.8 4E-19 1.4E-23 187.4 16.8 238 194-547 49-300 (442)
53 2xu9_A Laccase; oxidoreductase 99.8 2E-18 6.9E-23 181.4 21.5 231 29-291 145-424 (439)
54 1v10_A Laccase; multicopper bl 99.7 2E-16 6.7E-21 169.5 24.4 236 49-291 191-475 (521)
55 1hfu_A Laccase 1; oxidoreducta 99.7 2.5E-16 8.7E-21 168.1 24.9 256 32-291 143-454 (503)
56 3zx1_A Oxidoreductase, putativ 99.7 3.6E-16 1.2E-20 164.6 22.2 241 31-291 181-465 (481)
57 3t6v_A Laccase; beta barrel, o 99.7 3.7E-15 1.3E-19 158.0 24.7 241 48-291 167-455 (495)
58 1zpu_A Iron transport multicop 99.7 6.5E-15 2.2E-19 157.9 25.7 225 49-291 167-465 (534)
59 3pxl_A Laccase; 4-copper prote 99.7 6.2E-15 2.1E-19 156.2 23.3 240 48-291 165-455 (499)
60 1aoz_A Ascorbate oxidase; oxid 99.7 5.4E-15 1.8E-19 159.7 22.9 211 62-291 205-509 (552)
61 3od3_A Blue copper oxidase CUE 99.6 6E-15 2E-19 155.3 19.8 249 31-291 151-474 (488)
62 2q9o_A Laccase-1; multicopper 99.6 3.9E-14 1.3E-18 152.9 26.2 241 48-291 194-505 (559)
63 2g23_A PHS, phenoxazinone synt 99.6 1.8E-14 6.3E-19 155.5 23.0 233 48-291 253-575 (612)
64 3aw5_A Multicopper oxidase; be 99.6 1.2E-14 4.2E-19 152.5 18.7 227 31-291 138-433 (448)
65 2wsd_A Spore coat protein A; o 99.6 6E-15 2E-19 157.8 12.7 217 48-291 229-494 (513)
66 3abg_A Bilirubin oxidase; clea 99.6 4.3E-14 1.5E-18 151.3 18.7 243 31-291 172-459 (534)
67 3tas_A Small laccase, multi-co 99.5 5.5E-14 1.9E-18 140.7 15.3 218 213-547 41-274 (313)
68 3cvb_A Plastocyanin; cupredoxi 99.5 4.2E-15 1.4E-19 124.0 4.7 89 57-149 15-105 (105)
69 3sqr_A Laccase; multicopper ox 99.5 9.1E-12 3.1E-16 133.7 26.0 238 49-291 225-528 (580)
70 3gyr_A PHS, phenoxazinone synt 99.4 7.8E-12 2.7E-16 137.3 21.4 231 48-291 253-575 (612)
71 1iby_A Nitrosocyanin; RED copp 99.4 1.4E-12 4.7E-17 109.9 11.7 105 31-149 2-112 (112)
72 2cal_A Rusticyanin; iron respi 99.4 2.5E-12 8.5E-17 114.2 10.4 99 45-148 46-154 (154)
73 3cg8_A Laccase; oxidoreductase 99.3 5.7E-12 2E-16 127.4 11.1 101 52-154 198-311 (343)
74 1fwx_A Nitrous oxide reductase 99.2 3.3E-11 1.1E-15 128.2 11.1 95 46-151 498-594 (595)
75 2aan_A Auracyanin A; cupredoxi 99.2 3.9E-11 1.3E-15 105.1 6.8 95 438-543 35-139 (139)
76 2ov0_A Amicyanin; beta-sandwic 99.1 2E-10 6.9E-15 95.2 10.2 79 55-148 27-105 (105)
77 3cvb_A Plastocyanin; cupredoxi 99.1 1.4E-10 4.7E-15 96.3 6.0 85 438-543 19-104 (105)
78 2gim_A Plastocyanin; beta shee 99.0 2E-09 6.7E-14 89.4 8.8 83 61-149 20-106 (106)
79 2aan_A Auracyanin A; cupredoxi 98.9 7E-09 2.4E-13 90.6 10.4 91 57-148 31-139 (139)
80 2gim_A Plastocyanin; beta shee 98.8 1.5E-08 5.3E-13 83.9 8.7 85 438-543 20-105 (106)
81 3c75_A Amicyanin; copper prote 98.8 1.5E-08 5E-13 87.5 8.5 79 55-148 54-132 (132)
82 4hci_A Cupredoxin 1; structura 98.7 4.5E-08 1.5E-12 80.2 8.8 79 55-148 22-100 (100)
83 1qhq_A Protein (auracyanin); e 98.7 3.9E-08 1.3E-12 85.9 8.9 99 439-544 34-140 (140)
84 1qhq_A Protein (auracyanin); e 98.7 1.3E-07 4.5E-12 82.5 12.2 91 58-149 30-140 (140)
85 2plt_A Plastocyanin; electron 98.6 6.1E-08 2.1E-12 79.0 7.0 80 61-148 18-98 (98)
86 1bxv_A Plastocyanin; copper pr 98.6 2E-07 6.7E-12 74.8 8.5 73 61-148 19-91 (91)
87 1pcs_A Plastocyanin; electron 98.6 1.8E-07 6.1E-12 76.2 8.1 80 61-148 19-98 (98)
88 1pcs_A Plastocyanin; electron 98.5 2.8E-07 9.6E-12 75.0 8.5 78 439-543 20-98 (98)
89 2plt_A Plastocyanin; electron 98.5 2.4E-07 8E-12 75.5 7.7 81 438-543 18-98 (98)
90 1b3i_A PETE protein, protein ( 98.5 3.6E-07 1.2E-11 74.3 8.7 77 61-148 19-97 (97)
91 1bxv_A Plastocyanin; copper pr 98.5 3E-07 1E-11 73.7 7.6 73 438-543 19-91 (91)
92 3erx_A Pseudoazurin; copper pr 98.5 5.2E-07 1.8E-11 76.3 8.8 75 61-150 21-95 (123)
93 3tu6_A Pseudoazurin (blue copp 98.4 3.8E-07 1.3E-11 77.5 7.7 76 61-151 23-98 (127)
94 1plc_A Plastocyanin; electron 98.4 8.4E-07 2.9E-11 72.3 9.3 77 61-148 17-99 (99)
95 1kdj_A Plastocyanin; electron 98.4 5E-07 1.7E-11 74.1 7.9 82 61-148 17-102 (102)
96 1byp_A Protein (plastocyanin); 98.4 1.1E-06 3.7E-11 71.7 9.3 77 61-148 17-99 (99)
97 3ef4_A Pseudoazurin, blue copp 98.4 9E-07 3.1E-11 74.7 8.5 75 61-150 22-96 (124)
98 1b3i_A PETE protein, protein ( 98.4 6.5E-07 2.2E-11 72.7 7.4 78 439-543 20-97 (97)
99 1iby_A Nitrosocyanin; RED copp 98.4 1.1E-06 3.6E-11 73.5 8.6 75 438-544 38-112 (112)
100 1byp_A Protein (plastocyanin); 98.3 1.6E-06 5.4E-11 70.7 8.8 82 439-543 18-99 (99)
101 4hci_A Cupredoxin 1; structura 98.3 1.6E-06 5.5E-11 70.8 8.3 72 439-543 29-100 (100)
102 1cuo_A Protein (azurin ISO-2); 98.3 2.6E-06 9E-11 72.6 8.5 93 57-149 14-129 (129)
103 1kdj_A Plastocyanin; electron 98.2 2.5E-06 8.6E-11 69.9 7.9 85 438-543 17-102 (102)
104 1id2_A Amicyanin; beta barrel, 98.2 7.9E-06 2.7E-10 67.3 10.0 77 57-148 30-106 (106)
105 3ay2_A Lipid modified azurin p 98.2 4.3E-06 1.5E-10 74.2 8.7 92 57-149 54-167 (167)
106 1iuz_A Plastocyanin; electron 98.2 7.9E-06 2.7E-10 66.3 9.5 77 61-148 18-98 (98)
107 1paz_A Pseudoazurin precursor; 98.1 8.9E-06 3.1E-10 68.8 8.9 75 61-150 21-95 (123)
108 2ccw_A Azurin II, AZN-2; elect 98.1 2.1E-05 7.2E-10 67.0 10.5 91 57-149 14-129 (129)
109 2iaa_C Azurin; quinoprotein, t 98.1 2.2E-05 7.6E-10 66.7 10.5 91 57-149 13-128 (128)
110 1plc_A Plastocyanin; electron 98.1 6.8E-06 2.3E-10 66.8 7.1 83 438-543 17-99 (99)
111 1pmy_A Pseudoazurin; electron 98.1 8.9E-06 3.1E-10 68.8 8.0 76 61-151 21-96 (123)
112 1nwp_A Azurin; electron transp 98.0 3.1E-05 1.1E-09 65.8 10.4 91 57-148 14-128 (128)
113 3sbq_A Nitrous-oxide reductase 98.0 3.1E-05 1.1E-09 80.7 11.7 96 44-150 539-638 (638)
114 2cal_A Rusticyanin; iron respi 98.0 3.5E-05 1.2E-09 67.9 10.0 85 438-543 61-154 (154)
115 2ux6_A Pseudoazurin; type-1 co 97.9 2.1E-05 7.3E-10 66.4 7.8 73 61-150 21-93 (122)
116 1fwx_A Nitrous oxide reductase 97.9 4.7E-05 1.6E-09 81.2 10.4 78 438-545 513-593 (595)
117 2ov0_A Amicyanin; beta-sandwic 97.8 4.9E-05 1.7E-09 62.4 8.3 73 438-543 33-105 (105)
118 3fsa_A Azurin; copper, cupredo 97.5 0.00076 2.6E-08 56.4 10.3 89 57-148 14-125 (125)
119 3tu6_A Pseudoazurin (blue copp 97.2 0.00074 2.5E-08 57.1 7.2 76 438-546 23-98 (127)
120 3ef4_A Pseudoazurin, blue copp 97.2 0.0011 3.6E-08 55.8 7.9 75 438-545 22-96 (124)
121 3erx_A Pseudoazurin; copper pr 97.1 0.0016 5.5E-08 54.8 8.6 74 438-544 21-94 (123)
122 1iuz_A Plastocyanin; electron 97.1 0.0018 6.1E-08 52.2 8.5 81 438-543 18-98 (98)
123 1id2_A Amicyanin; beta barrel, 97.0 0.0025 8.6E-08 52.1 8.3 73 438-543 34-106 (106)
124 3c75_A Amicyanin; copper prote 96.9 0.0035 1.2E-07 53.4 8.4 73 438-543 60-132 (132)
125 1paz_A Pseudoazurin precursor; 96.5 0.0096 3.3E-07 50.0 8.6 37 505-545 59-95 (123)
126 1pmy_A Pseudoazurin; electron 96.5 0.0081 2.8E-07 50.4 8.0 38 504-545 58-95 (123)
127 3sbq_A Nitrous-oxide reductase 96.3 0.015 5.1E-07 60.9 10.3 79 438-544 558-637 (638)
128 2cua_A Protein (CUA); CUA cent 96.3 0.022 7.7E-07 48.5 9.5 74 61-149 60-135 (135)
129 3s8f_B Cytochrome C oxidase su 96.0 0.045 1.5E-06 48.4 10.4 74 61-149 93-168 (168)
130 3ay2_A Lipid modified azurin p 95.7 0.027 9.3E-07 49.7 7.5 44 499-543 121-166 (167)
131 1cuo_A Protein (azurin ISO-2); 95.6 0.064 2.2E-06 45.2 9.5 90 439-543 19-128 (129)
132 2cua_A Protein (CUA); CUA cent 95.6 0.056 1.9E-06 46.0 9.0 70 440-543 62-134 (135)
133 2ux6_A Pseudoazurin; type-1 co 95.4 0.051 1.7E-06 45.4 7.8 73 438-545 21-93 (122)
134 2iaa_C Azurin; quinoprotein, t 94.2 0.15 5.3E-06 42.8 8.0 43 500-543 82-127 (128)
135 1nwp_A Azurin; electron transp 93.4 0.31 1E-05 40.9 8.3 43 500-543 83-128 (128)
136 2ccw_A Azurin II, AZN-2; elect 93.3 0.3 1E-05 41.1 8.1 43 500-543 83-128 (129)
137 3s8f_B Cytochrome C oxidase su 93.2 0.41 1.4E-05 42.2 9.0 72 440-543 95-167 (168)
138 3fsa_A Azurin; copper, cupredo 91.5 0.92 3.1E-05 37.6 8.6 95 440-543 20-125 (125)
139 3isy_A Bsupi, intracellular pr 89.7 2.9 9.8E-05 34.4 10.0 71 220-291 16-101 (120)
140 1cyx_A CYOA; electron transpor 86.5 4.6 0.00016 36.5 10.1 61 215-294 42-102 (205)
141 3isy_A Bsupi, intracellular pr 80.0 22 0.00074 29.1 10.7 71 52-133 25-100 (120)
142 2gsm_B Cytochrome C oxidase su 74.8 13 0.00043 35.2 9.2 62 214-294 171-232 (262)
143 3hb3_B Cytochrome C oxidase su 74.5 15 0.00052 35.3 9.7 62 214-294 189-250 (298)
144 2pq4_B Periplasmic nitrate red 73.8 2.1 7E-05 26.8 2.3 19 4-22 3-21 (35)
145 1v54_B Cytochrome C oxidase po 62.9 25 0.00086 32.3 8.3 62 214-294 140-201 (227)
146 2r39_A FIXG-related protein; s 52.5 44 0.0015 27.0 7.3 48 222-279 33-82 (118)
147 1fft_B Ubiquinol oxidase; elec 52.4 17 0.00058 35.2 5.4 61 215-294 152-212 (315)
148 3hb3_B Cytochrome C oxidase su 52.0 41 0.0014 32.3 7.9 76 438-545 189-265 (298)
149 1cyx_A CYOA; electron transpor 50.3 36 0.0012 30.6 6.8 74 438-543 41-115 (205)
150 1yew_A Particulate methane mon 49.0 55 0.0019 31.9 8.2 16 106-121 319-334 (382)
151 2xzz_A Protein-glutamine gamma 49.0 21 0.00072 28.2 4.5 53 70-128 23-79 (102)
152 4aay_B AROB; oxidoreductase, r 45.6 4.4 0.00015 35.8 0.0 23 1-23 7-29 (175)
153 2gsm_B Cytochrome C oxidase su 43.5 62 0.0021 30.3 7.7 75 438-544 171-246 (262)
154 1xwv_A DER F II; beta sheets, 38.8 53 0.0018 27.0 5.7 69 52-121 16-92 (129)
155 4ubp_B Protein (urease (chain 38.5 56 0.0019 26.6 5.4 59 62-120 18-88 (126)
156 4ac7_B Urease subunit beta; hy 38.5 56 0.0019 26.6 5.4 59 62-120 18-88 (126)
157 1nep_A EPV20, BNPC2, epididyma 38.0 47 0.0016 27.3 5.3 69 52-121 18-94 (130)
158 2p9r_A Alpha-2-M, alpha-2-macr 34.5 85 0.0029 24.2 6.1 68 217-290 12-83 (102)
159 2f1e_A Protein APAG; APAG prot 32.3 40 0.0014 27.8 3.8 45 72-119 34-86 (127)
160 1v54_B Cytochrome C oxidase po 31.8 1E+02 0.0035 28.2 6.9 76 437-544 139-215 (227)
161 1xvs_A Protein APAG; MCSG APC2 30.3 37 0.0013 27.9 3.3 45 72-119 33-85 (126)
162 2wtp_A ORF131 protein, CZCE; m 27.1 28 0.00095 28.8 1.9 18 215-232 72-89 (131)
163 3kmh_A D-lyxose isomerase; cup 26.3 78 0.0027 29.0 4.9 50 61-117 129-184 (246)
164 1jer_A Cucumber stellacyanin; 26.2 81 0.0028 26.3 4.7 74 64-156 31-115 (138)
165 1xq4_A Protein APAG; all beta 25.6 54 0.0018 27.5 3.5 45 72-119 38-90 (139)
166 3uv0_A Mutator 2, isoform B; F 25.4 72 0.0024 25.0 3.9 68 195-274 6-84 (102)
167 1tza_A APAG protein, SOR45; st 24.6 48 0.0016 27.6 3.0 45 72-119 33-85 (134)
168 2h7w_A Chagasin; beta-strands, 24.3 2.9E+02 0.01 22.6 7.9 20 60-79 32-51 (131)
169 2x3c_A Toxic extracellular end 24.1 2.3E+02 0.008 27.5 8.4 69 221-291 37-127 (343)
170 1x9u_A Umecyanin; cupredoxin, 23.4 75 0.0026 25.6 3.9 35 117-152 72-108 (116)
171 2cio_B Inhibitor of cysteine p 23.2 2.9E+02 0.01 22.2 7.7 21 60-80 12-32 (121)
172 1x9u_A Umecyanin; cupredoxin, 22.7 76 0.0026 25.6 3.8 33 513-545 73-106 (116)
173 2c34_A ICP, inhibitor of cyste 22.0 3E+02 0.01 21.9 8.3 68 60-128 14-89 (116)
174 2yev_B Cytochrome C oxidase su 27.5 19 0.00065 35.3 0.0 60 215-293 142-201 (337)
175 2wtp_A ORF131 protein, CZCE; m 21.4 35 0.0012 28.1 1.5 17 62-78 72-88 (131)
176 3b9t_A Twin-arginine transloca 20.7 41 0.0014 34.5 2.2 26 50-76 83-109 (484)
177 2hj1_A Hypothetical protein; s 20.2 34 0.0012 26.7 1.1 24 50-73 59-82 (97)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=1.6e-99 Score=821.37 Aligned_cols=510 Identities=29% Similarity=0.559 Sum_probs=409.1
Q ss_pred CceEEEEEEEEEEEeecCCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCcccc
Q 036540 28 AAVKKYQFDVQVKNVSRLCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQ-YNMSIHWHGLKQYRNGWADGPAYITQ 106 (562)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DGv~~~t~ 106 (562)
+++++|+|+|++..+++||..+.+|+|||++|||+||+++||+|+|+|+|.|+ ++++|||||+++...+|+||++++||
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 47899999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCeEEEEEEeCCCCCceEEecCchhhc-ccceeEEEEcCCCCCCCCCCCCCcceEEEEeeccccCHHHHHHhccc
Q 036540 107 CPIKTGNSYTYDFNVTGQRGTLWWHAHILWLR-ATVYGAIVIMPKERTSFPFPQPYQETNIILGEWWNSDVETIVNQGNK 185 (562)
Q Consensus 107 ~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 185 (562)
|+|+||++|+|+|++ +++||||||||.+.|. +||+|+|||+++.....++ ..|+|++|+++||++.+...+......
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhc
Confidence 999999999999999 8999999999999888 8999999999986544444 346899999999999887766544332
Q ss_pred CC-CCCCCCCceeECCccCCCCCC-------------CCC-----cceEEEEecCcEEEEEEEecCCCCeEEEEEcCcce
Q 036540 186 LG-LPPQTSDAHTINGKSGPLFPC-------------SEK-----HTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNM 246 (562)
Q Consensus 186 ~g-~~~~~~~~~~iNG~~~~~~~~-------------~~~-----~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~ 246 (562)
.. .....++.++|||+.. ++| +.. ..+.++|++|++|||||||+|..+.+.|+|+||+|
T Consensus 159 ~~~~~~~~~~~~liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~ 236 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL 236 (552)
T ss_dssp SSCCCCCSCSEEEETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred ccccCCCCCCeEEECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence 11 1112457899999985 333 221 12379999999999999999999999999999999
Q ss_pred EEEEeCCCccCceEEeEEEeCCCceEEEEEEe-CCCCCeEEEEEeecCCCCCCCCCcceEEEEEecCCCCC--CCCCCCC
Q 036540 247 TVVEIDAVYTKPFTTQAILIAPGQTTNVLVKA-DQSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPNT--VLPTLPS 323 (562)
Q Consensus 247 ~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~-~~~~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~--~~~~~p~ 323 (562)
+|||+||.+++|+.++++.|+|||||||+|++ ++.+|+|+|+++... +. .++....++|+|.+.... +.+..|.
T Consensus 237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~-~~--~~~~~~~ail~y~~~~~~~~p~~~~p~ 313 (552)
T 1aoz_A 237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA-RH--PNTPPGLTLLNYLPNSVSKLPTSPPPQ 313 (552)
T ss_dssp EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES-SC--CCSCCEEEEEEETTSCTTSCCSSCCCC
T ss_pred EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc-CC--CCCccEEEEEEECCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999 555799999998753 21 134567899999876541 1222344
Q ss_pred CCCCCCchhhccccccccCCCCCCCCCCCCCCcceEEEEEeccCCCCCCCCCCCceeEEeecccccccCccccceeeecc
Q 036540 324 LPAPSDTNFALNYSSKLRSLNTPQYPANVPLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNITFVMPKIGLLQAHYFN 403 (562)
Q Consensus 324 ~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~p~~~~l~~~~~~ 403 (562)
.|.+++......+ .++.+..+. +...+..+++++.+.+.+.. ......|++||++|..|..|+|.+.+.+
T Consensus 314 ~p~~~~~~~~~~~--~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~-------~~~~~~w~iNg~s~~~p~~P~L~~~~~~ 383 (552)
T 1aoz_A 314 TPAWDDFDRSKNF--TYRITAAMG-SPKPPVKFNRRIFLLNTQNV-------INGYVKWAINDVSLALPPTPYLGAMKYN 383 (552)
T ss_dssp CCCTTCHHHHHHH--HTTCCBCTT-CCCCCSSCSEEEEEEEEEEE-------ETTEEEEEETTEEECCCSSCHHHHHHTT
T ss_pred CCccccccccccc--cccccccCC-CCCCCCCCcEEEEEEEeecc-------CCCeEEEEECCCccCCCCCCHHHHHhhc
Confidence 4544443322211 133332222 23345667888877765432 1125679999999999988988887777
Q ss_pred ccccccCCCCCCCC-CcCcCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCC---CCCCCeeecCCCeEEEEecC
Q 036540 404 ISGVFRTDFPDRPP-VPFNYTGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLT---VESHPFHLHGYNFFVVGSGI 479 (562)
Q Consensus 404 ~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~---~~~HP~HlHG~~F~vl~~g~ 479 (562)
++|.|..+++..++ ..|+... .+.+...+.++.++.++.|++|||+|+|.+.+. .+.||||||||+|+||++|.
T Consensus 384 ~~g~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~ 461 (552)
T 1aoz_A 384 LLHAFDQNPPPEVFPEDYDIDT--PPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGD 461 (552)
T ss_dssp CTTSSCCSCCCSCCCTTCCTTS--CCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEE
T ss_pred CccccccCCCcccccccccccc--ccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEeccc
Confidence 77877766654332 1233321 112233455678899999999999999976433 56799999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEecCceeEEEEeehhHhHhccceEEEEEecCCCCCCCCCCCCCCC
Q 036540 480 GNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRADNPGVWFMHCHLELHTMWGLKMAFVVENGKSPDQSIVPPPKDL 559 (562)
Q Consensus 480 g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p~~~ 559 (562)
|.|++ .+...+|+.+|.|||||.|+++||++|||++||||.|+|||||+||++.|||++|.|.+. +++++|+++
T Consensus 462 G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-----~~~~~P~~~ 535 (552)
T 1aoz_A 462 GKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKA 535 (552)
T ss_dssp SSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHH
T ss_pred CccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-----hhccCCcch
Confidence 99987 445678899999999999999999999999999999999999999999999999987542 567789999
Q ss_pred CCC
Q 036540 560 PPC 562 (562)
Q Consensus 560 ~~c 562 (562)
++|
T Consensus 536 ~~C 538 (552)
T 1aoz_A 536 LAC 538 (552)
T ss_dssp HSS
T ss_pred hhh
Confidence 999
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=4e-95 Score=779.38 Aligned_cols=464 Identities=28% Similarity=0.492 Sum_probs=373.5
Q ss_pred cCceEEEEEEEEEEEeecCCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCccc
Q 036540 27 DAAVKKYQFDVQVKNVSRLCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQ-YNMSIHWHGLKQYRNGWADGPAYIT 105 (562)
Q Consensus 27 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DGv~~~t 105 (562)
.+++++|+|+|++..+++||..+.+|+|||++|||+||+++||+|+|+|+|.|+ ++++|||||+++..++|+||++++|
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 577899999999999999999999999999999999999999999999999998 8999999999999889999999999
Q ss_pred ccccCCCCeEEEEEEeCCCCCceEEecCchhhc-ccceeEEEEcCCCCCCCCCCCCCcce-EEEEeeccccCHHHHHHhc
Q 036540 106 QCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLR-ATVYGAIVIMPKERTSFPFPQPYQET-NIILGEWWNSDVETIVNQG 183 (562)
Q Consensus 106 ~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~~~~~ 183 (562)
||+|+||++|+|+|++ .++||||||||...|+ +||+|+|||+++... .+|+|. +|+++||+++...++....
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~-----~yD~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATA-----DYDEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcccC-----CCCccceEEEEEEEecCCHHHHHHHH
Confidence 9999999999999999 7999999999999998 899999999987653 247787 9999999999888776655
Q ss_pred ccCCCCCCCCCceeECCccCCCCCCCC---------CcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCC
Q 036540 184 NKLGLPPQTSDAHTINGKSGPLFPCSE---------KHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAV 254 (562)
Q Consensus 184 ~~~g~~~~~~~~~~iNG~~~~~~~~~~---------~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~ 254 (562)
...+ +..++.++|||+.. ++|+. ...+.++|++|++|||||||+|....+.|+|+||+|+|||+||.
T Consensus 218 ~~~~--~~~~d~~liNG~~~--~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~ 293 (580)
T 3sqr_A 218 RLGA--PPALENTLMNGTNT--FDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLV 293 (580)
T ss_dssp TTSC--CCCBSEEEETTBCC--CCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred hccC--CCCCceEEECCccc--CCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCc
Confidence 4432 45678999999964 45542 24589999999999999999999999999999999999999999
Q ss_pred ccCceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhc
Q 036540 255 YTKPFTTQAILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFAL 334 (562)
Q Consensus 255 ~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~ 334 (562)
+++|+.+++|.|+|||||||+|++++.+|+|||++....++.....+....|||+|.++.... |..+.+.....+.
T Consensus 294 ~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~----P~~~~~~~~~~~~ 369 (580)
T 3sqr_A 294 PIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIAN----PTSVGTTPRGTCE 369 (580)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCC----CCCCCCCCCCCSC
T ss_pred cCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCC----CCCCCCCccchhh
Confidence 999999999999999999999999998899999998754442223334679999998754322 2222222111111
Q ss_pred cc-cccccCCCCCCCCCCCCCCcceEEEEEeccCCCCCCCCCCCceeEEeeccccccc-CccccceeeeccccccccCCC
Q 036540 335 NY-SSKLRSLNTPQYPANVPLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNITFVM-PKIGLLQAHYFNISGVFRTDF 412 (562)
Q Consensus 335 ~~-~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~-p~~~~l~~~~~~~~g~~~~~~ 412 (562)
+. ...|.++ .+..+|...+.++.+.++ .+..+.|++||.+|.. ++.|.|...+. |. .+|
T Consensus 370 ~~~~~~L~P~----~~~~~~~~~~~~~~l~~~----------~~~~~~w~iN~~s~~~~~~~P~L~~~~~---g~--~~~ 430 (580)
T 3sqr_A 370 DEPVASLVPH----LALDVGGYSLVDEQVSSA----------FTNYFTWTINSSSLLLDWSSPTTLKIFN---NE--TIF 430 (580)
T ss_dssp CSCGGGCCBS----SCCBCCSEEEEEEEEEEE----------ESSSEEEEETTBCCCCCTTSCHHHHHHT---TC--CCC
T ss_pred cccccccccC----CCCCCCCccceEEEEEec----------cCCceeEEECCEecccCCCCCchhhhhc---CC--ccC
Confidence 10 0123222 122334444555544442 2246789999999975 46666554322 21 122
Q ss_pred CCCCCCcCcCCCCCCCCCcCCCCceeeEEe----ecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCC
Q 036540 413 PDRPPVPFNYTGAPLTANLGTSLGTRLSKV----AFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDP 488 (562)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~ 488 (562)
+ ....++.+ +.|++|||+|+|.+.. ...||||||||+|+||++|.|.|+++.++
T Consensus 431 ~---------------------~~~~~~~~~~~~~~~~~VeiVi~n~~~~-~~~HP~HLHGh~F~vv~~g~G~f~~~~~~ 488 (580)
T 3sqr_A 431 P---------------------TEYNVVALEQTNANEEWVVYVIEDLTGF-GIWHPIHLHGHDFFIVAQETDVFNSDESP 488 (580)
T ss_dssp C---------------------GGGCEEEECC----CCEEEEEEEECSSS-CCCEEEEESSCCEEEEEEESSCCCTTTSG
T ss_pred C---------------------CCcceeecccccCCCcEEEEEEeCCCcc-ccceeeEecCceEEEEecCCCccCccccc
Confidence 1 11234444 4699999999997532 56899999999999999999999988777
Q ss_pred CCCCCCCCCccceeeecCCCEEEEEEEecCceeEEEEeehhHhHhccceEEEEEecC
Q 036540 489 AKFNLVDPPERNTVGVPTGGWTAIRFRADNPGVWFMHCHLELHTMWGLKMAFVVENG 545 (562)
Q Consensus 489 ~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~~~ 545 (562)
..+|+.+|++||||.|+++||++|||++||||.|+|||||+||++.||+++|.+.+.
T Consensus 489 ~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~ 545 (580)
T 3sqr_A 489 AKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQS 545 (580)
T ss_dssp GGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESGG
T ss_pred cccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECHH
Confidence 889999999999999999999999999999999999999999999999999987654
No 3
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=5.5e-93 Score=763.56 Aligned_cols=478 Identities=30% Similarity=0.464 Sum_probs=363.1
Q ss_pred cccCceEEEEEEEEEEEeecCCc-eeeEEEEcCcCCCceEEEecCCEEEEEEEeCCC-----CCceEEecCccccCCCCC
Q 036540 25 PADAAVKKYQFDVQVKNVSRLCN-SKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQ-----YNMSIHWHGLKQYRNGWA 98 (562)
Q Consensus 25 ~~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-----~~~siH~HG~~~~~~~~~ 98 (562)
...+.+.+|+|++++..+++||+ .+.+|+|||++|||+||+++||+|+|+|+|.|+ ++++|||||+++...+|+
T Consensus 18 ~~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~ 97 (521)
T 1v10_A 18 LSLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEM 97 (521)
T ss_dssp ----CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGG
T ss_pred hhcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCcc
Confidence 34567788999999999999999 999999999999999999999999999999998 999999999999888899
Q ss_pred CCCCcccccccCCCCeEEEEEEeCCCCCceEEecCchhhc-ccceeEEEEcCCCCC-CCCCCCCCcceEEEEeeccccCH
Q 036540 99 DGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLR-ATVYGAIVIMPKERT-SFPFPQPYQETNIILGEWWNSDV 176 (562)
Q Consensus 99 DGv~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~-~Gl~G~iiV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~ 176 (562)
||++++|||+|+||++++|+|++++++||||||||.+.|. +||+|+|||+++.+. +..++..++|++|+++||+++..
T Consensus 98 DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~ 177 (521)
T 1v10_A 98 DGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLS 177 (521)
T ss_dssp SCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCC
T ss_pred CCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCH
Confidence 9999999999999999999999768999999999999998 899999999987632 11232234699999999998876
Q ss_pred HHHHHhcccCCCCCCCCCceeECCccCCCCCCC--CCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCC
Q 036540 177 ETIVNQGNKLGLPPQTSDAHTINGKSGPLFPCS--EKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAV 254 (562)
Q Consensus 177 ~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~--~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~ 254 (562)
..+... .+.....++.++|||+.+ +.|. ....+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.
T Consensus 178 ~~~~~~---~~~~~~~~d~~liNG~~~--~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~ 252 (521)
T 1v10_A 178 TVLFPN---PNKAPPAPDTTLINGLGR--NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGV 252 (521)
T ss_dssp C----------CCCSCCSEEEETTBCC--CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred HHHhhc---cCCCCCCCCEEEECCccc--CCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCc
Confidence 654321 112234578999999975 4564 234488999999999999999999999999999999999999999
Q ss_pred ccCceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhc
Q 036540 255 YTKPFTTQAILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFAL 334 (562)
Q Consensus 255 ~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~ 334 (562)
+++|+.++++.|+|||||||+|++++.+|+|+|+++....+. .+......++|+|.+.....+.. +.. .....
T Consensus 253 ~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~-~~~~~~~~ail~y~~~~~~~p~~----~~~-~~~~~- 325 (521)
T 1v10_A 253 SHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRN-GFTGGINSAIFRYQGAAVAEPTT----SQN-SGTAL- 325 (521)
T ss_dssp EEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTCCSCCCCC----CCC-CSCBC-
T ss_pred cccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccc-cCCCCceeEEEEECCCCCCCCCC----CCC-ccccc-
Confidence 999999999999999999999999987799999998653221 12222346999998765432111 110 00000
Q ss_pred cccccccCCCCCCCCC-CCCCCcceEEEEEeccCCCCCCCCCCCceeEEeecccccccCccccceeeeccccccccCCCC
Q 036540 335 NYSSKLRSLNTPQYPA-NVPLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNITFVMPKIGLLQAHYFNISGVFRTDFP 413 (562)
Q Consensus 335 ~~~~~l~~l~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~~ 413 (562)
....+.++.....|. ..+...+.++.+.+.+ ++..+.|++||++|..+..+.|.+.+. |.+..
T Consensus 326 -~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~---------~~~~~~~~iNg~~~~~~~~P~l~~~~~---g~~~~--- 389 (521)
T 1v10_A 326 -NEANLIPLINPGAPGNPVPGGADINLNLRIGR---------NATTADFTINGAPFIPPTVPVLLQILS---GVTNP--- 389 (521)
T ss_dssp -CGGGCCBSSCCCCSSCSSTTCSSEEEECCEEC---------CSSSSCCEESSCCCCCCSSCHHHHHHH---TCCCG---
T ss_pred -chhhcccCCcccCCCcccCCcceEEEEEEEec---------CCceeEEEECCCcccCCCCchhhhhhc---CCccc---
Confidence 011233332222221 1222345555443322 222346899999998887766544321 21100
Q ss_pred CCCCCcCcCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCC
Q 036540 414 DRPPVPFNYTGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNL 493 (562)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~ 493 (562)
. ....+..++.++.|++|||+++| .+.||||||||+|+||+++.+. .+++
T Consensus 390 ----~-------------~~~~~~~~~~v~~g~~vei~l~N-----~~~HP~HLHGh~F~Vl~~~~~~--------~~n~ 439 (521)
T 1v10_A 390 ----N-------------DLLPGGAVISLPANQVIEISIPG-----GGNHPFHLHGHNFDVVRTPGSS--------VYNY 439 (521)
T ss_dssp ----G-------------GSSSTTTEEEECTTCEEEEEEEC-----CBSCEEEESSCCEEEEECTTCS--------CCCC
T ss_pred ----c-------------cCCCCceEEEecCCCEEEEEEcC-----CCCCCEEEccceEEEEecCCCC--------cccc
Confidence 0 01123567889999999999999 4589999999999999997442 3577
Q ss_pred CCCCccceeee-cCCCEEEEEEEecCceeEEEEeehhHhHhccceEEEEEecCCCCCCCCCC-CCCCCCCC
Q 036540 494 VDPPERNTVGV-PTGGWTAIRFRADNPGVWFMHCHLELHTMWGLKMAFVVENGKSPDQSIVP-PPKDLPPC 562 (562)
Q Consensus 494 ~~p~~rDTv~v-pp~g~~~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~-~p~~~~~c 562 (562)
.+|.|||||.| |+++|++|||++||||.|+|||||+||++.|||++|.|.+.+. .++.+ |+...+.|
T Consensus 440 ~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~--~~~~~~p~~~~~~C 508 (521)
T 1v10_A 440 VNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNI--PIANAISPAWDDLC 508 (521)
T ss_dssp SSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGGH--HHHSCCCHHHHTHH
T ss_pred CCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcch--hhccCCChHHhhhc
Confidence 89999999999 8999999999999999999999999999999999999875433 23333 33456666
No 4
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-92 Score=759.48 Aligned_cols=477 Identities=28% Similarity=0.409 Sum_probs=369.4
Q ss_pred ceEEEEEEEEEEEeecCC-ceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCcccc
Q 036540 29 AVKKYQFDVQVKNVSRLC-NSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQ-YNMSIHWHGLKQYRNGWADGPAYITQ 106 (562)
Q Consensus 29 ~~~~~~l~~~~~~~~~~g-~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DGv~~~t~ 106 (562)
++++|+|+|++..+++|| ..+.+|+|||++|||+||+++||+|+|+|+|.|+ ++++|||||+++...+|+||++++||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 7999999999999999999999999999999998 99999999999998889999999999
Q ss_pred cccCCCCeEEEEEEeCCCCCceEEecCchhhc-ccceeEEEEcCCCCCCCCCCCCCcceEEEEeeccccCHHHHHHhccc
Q 036540 107 CPIKTGNSYTYDFNVTGQRGTLWWHAHILWLR-ATVYGAIVIMPKERTSFPFPQPYQETNIILGEWWNSDVETIVNQGNK 185 (562)
Q Consensus 107 ~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 185 (562)
|+|+||++|+|+|++++++||||||||.+.|. +||+|+|||+++.. + + .+|+|++|+++||+++...++......
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-p--~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF-P--Y-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC-C--S-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC-C--C-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999965999999999999998 89999999999864 2 2 458899999999999988876654332
Q ss_pred C---CCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccCceEEe
Q 036540 186 L---GLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTKPFTTQ 262 (562)
Q Consensus 186 ~---g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d 262 (562)
. .+....++.++|||+.. +.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|+.++
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~----------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~ 226 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN----------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTD 226 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS----------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred cccCCCCCCCCceEEECCCCc----------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEec
Confidence 1 22344679999999975 7899999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCceEEEEEEeCCC-CCeEEEEEeecCCCC---CCCCCcceEEEEEecCCCCCCCCC-CCCCCC-CCCchhhccc
Q 036540 263 AILIAPGQTTNVLVKADQS-PSRYFMAARPFMDAP---IPVDNKTVTAILQYKGIPNTVLPT-LPSLPA-PSDTNFALNY 336 (562)
Q Consensus 263 ~v~l~pgeR~dv~v~~~~~-~G~~~i~~~~~~~~~---~~~~~~~~~ail~y~~~~~~~~~~-~p~~p~-~~~~~~~~~~ 336 (562)
++.|+|||||||+|++++. .|.|+|++.....+. ....+....++|+|.+....+.+. ...++. .++
T Consensus 227 ~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~------- 299 (534)
T 1zpu_A 227 MLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDD------- 299 (534)
T ss_dssp CEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCG-------
T ss_pred eEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCccccccccccc-------
Confidence 9999999999999999864 479999987543211 111234568999998754321111 111111 110
Q ss_pred cccccCCCCCCCCCCCCCCcceEEEEEeccCCCCCCCCCCCceeEEeecccccccCccccceeeeccccccccCCCCCCC
Q 036540 337 SSKLRSLNTPQYPANVPLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNITFVMPKIGLLQAHYFNISGVFRTDFPDRP 416 (562)
Q Consensus 337 ~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~ 416 (562)
..++++.. ..++..+++++.+.+.+... .++ ...|++||++|..|+.|.|.+.+.. +.+. ..+
T Consensus 300 -~~l~p~~~----~~~~~~~~~~~~l~~~~~~~-----~~~-~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~----~~~ 362 (534)
T 1zpu_A 300 -FYLQPYEK----EAIYGEPDHVITVDVVMDNL-----KNG-VNYAFFNNITYTAPKVPTLMTVLSS--GDQA----NNS 362 (534)
T ss_dssp -GGCCBSSC----CCCCCSCSEEEEEEEEEEEC-----TTS-CEEEEETTBCCCCCSSCHHHHHTTS--GGGT----TCG
T ss_pred -ccceeCCC----CCCCCCCCeEEEEEEEeecc-----CCc-eeEEEECCCcccCCCCCceeeeccc--Cccc----CCC
Confidence 11232221 12334567887776654321 022 2358899999998887765442211 1111 000
Q ss_pred CCcCcCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCC----------CCCCCC
Q 036540 417 PVPFNYTGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIG----------NFDPKK 486 (562)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g----------~~~~~~ 486 (562)
. ....+..++.++.|++|+|+|+|.+ .+.||||||||+|+||+++.+ .|++..
T Consensus 363 -~-------------~~~~~~~~~~~~~g~~v~ivi~N~~---~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~ 425 (534)
T 1zpu_A 363 -E-------------IYGSNTHTFILEKDEIVEIVLNNQD---TGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDN 425 (534)
T ss_dssp -G-------------GGCSSSCEEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTB
T ss_pred -c-------------ccCCCceEEEeCCCCEEEEEEeCCC---CCCCCeEecCCceEEEeecCCccccccCcccccCccc
Confidence 0 1122356788999999999999975 679999999999999999864 444331
Q ss_pred CCCCCCCCCCCccceeeecCCCEEEEEEEecCceeEEEEeehhHhHhccceEEEEEecCCCCCC-CCCCCCCCCCCC
Q 036540 487 DPAKFNLVDPPERNTVGVPTGGWTAIRFRADNPGVWFMHCHLELHTMWGLKMAFVVENGKSPDQ-SIVPPPKDLPPC 562 (562)
Q Consensus 487 ~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~-~~~~~p~~~~~c 562 (562)
... ...+|.|||||.|++++|++|||++||||.|+|||||+||++.|||++|.|.+.+...+ .++.|++..+.|
T Consensus 426 -~~~-~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~~~~~~~~~~p~~~~~~C 500 (534)
T 1zpu_A 426 -HPA-FPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPFGIQDAHSQQLSENHLEVC 500 (534)
T ss_dssp -CCC-CCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHHHHCGGGSCCHHHHHHH
T ss_pred -ccc-ccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECccccccccccCCChhHhhhh
Confidence 112 24689999999999999999999999999999999999999999999998865332111 034454444444
No 5
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=3.7e-92 Score=748.45 Aligned_cols=458 Identities=30% Similarity=0.498 Sum_probs=358.6
Q ss_pred eEEEEEEEEEEEeecCCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCC-----CceEEecCccccCCCCCCCCCcc
Q 036540 30 VKKYQFDVQVKNVSRLCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQY-----NMSIHWHGLKQYRNGWADGPAYI 104 (562)
Q Consensus 30 ~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~-----~~siH~HG~~~~~~~~~DGv~~~ 104 (562)
...|+|+|++..+++||+.+.+|+|||++|||+||+++||+|+|+|+|.|++ +++|||||+++...+|+||++++
T Consensus 3 ~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 82 (499)
T 3pxl_A 3 GPVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI 82 (499)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred cceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 4689999999999999999999999999999999999999999999999984 79999999999988999999999
Q ss_pred cccccCCCCeEEEEEEeCCCCCceEEecCchhhc-ccceeEEEEcCCCCCC-CCCCCCCcceEEEEeeccccCHHHHHHh
Q 036540 105 TQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLR-ATVYGAIVIMPKERTS-FPFPQPYQETNIILGEWWNSDVETIVNQ 182 (562)
Q Consensus 105 t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~-~Gl~G~iiV~~~~~~~-~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 182 (562)
|||+|+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++.+.. ..++..++|++|+++||+++....
T Consensus 83 tq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~---- 158 (499)
T 3pxl_A 83 NQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL---- 158 (499)
T ss_dssp TBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT----
T ss_pred ccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc----
Confidence 9999999999999999977899999999999998 8999999999876421 112223467899999999875532
Q ss_pred cccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccCceEEe
Q 036540 183 GNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTKPFTTQ 262 (562)
Q Consensus 183 ~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d 262 (562)
.+..+..+++++|||+.. +..|.....+.++|++|++|||||||+|....+.|+|+||+|+|||+||.+++|+.++
T Consensus 159 ---~~~~p~~~d~~liNG~~~-~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~ 234 (499)
T 3pxl_A 159 ---GPRFPGGADATLINGKGR-APSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVD 234 (499)
T ss_dssp ---SCSSCSSCSEEEETTBCC-CTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred ---ccCCCCCCcEEEECCCCc-CCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEee
Confidence 223344679999999853 2233334568999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhccccccccC
Q 036540 263 AILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNYSSKLRS 342 (562)
Q Consensus 263 ~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~ 342 (562)
++.|+|||||||+|++++++|+|+|++.+...+. .+.+....++|+|.++....+. .+..+... ......|++
T Consensus 235 ~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~~p~-~~~~~~~~-----~~~~~~L~p 307 (499)
T 3pxl_A 235 SIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNV-GFDGGINSAILRYDGAPAVEPT-TNQTTSVK-----PLNEVDLHP 307 (499)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSSCCC-CCCCCCSS-----BCCGGGCCB
T ss_pred eEEECCCcEEEEEEECCCCCceEEEEEecccCcc-ccCCCceEEEEEeCCCCCCCCC-CCCCCCCc-----ccccccccc
Confidence 9999999999999999997799999998643332 2233345799999876432211 11111100 011123555
Q ss_pred CCCCCCCC-CCCCCcceEEEEEeccCCCCCCCCCCCceeEEeecccccccCccccceeeeccccccccCCCCCCCCCcCc
Q 036540 343 LNTPQYPA-NVPLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNITFVMPKIGLLQAHYFNISGVFRTDFPDRPPVPFN 421 (562)
Q Consensus 343 l~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~ 421 (562)
+.....|. ..+..+|+++.+.+.+. +. .|++||++|..|+.|+|.+.+. |.+.. .
T Consensus 308 ~~~~~~p~~~~~~~~d~~~~l~~~~~---------~~--~w~iNg~s~~~~~~P~L~~~~~---g~~~~------~---- 363 (499)
T 3pxl_A 308 LVSTPVPGAPSSGGVDKAINMAFNFN---------GS--NFFINGASFVPPTVPVLLQILS---GAQTA------Q---- 363 (499)
T ss_dssp SSCCCCSSCSSTTCSSEEEECCEEEC---------SS--CEEETTBCCCCCSSCHHHHHHT---TCCST------T----
T ss_pred cccccCCCcccCCCCcEEEEEEEEec---------Cc--EEEEcCEecCCCCCchhhhhhc---CCccc------c----
Confidence 43332222 13345677776655442 11 5899999999888776554221 21110 0
Q ss_pred CCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccce
Q 036540 422 YTGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNT 501 (562)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDT 501 (562)
.......++.++.|++|||+|+|.+....+.||||||||+|+||+.+. ...+|+.+|+||||
T Consensus 364 ----------~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g--------~~~~n~~~P~~rDt 425 (499)
T 3pxl_A 364 ----------DLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAG--------STVYNYDNPIFRDV 425 (499)
T ss_dssp ----------TSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTT--------CCCCCSSSCCEESE
T ss_pred ----------ccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccC--------CcccccCCCCccce
Confidence 001224578999999999999953323477899999999999998641 23578889999999
Q ss_pred eeecC---CCEEEEEEEecCceeEEEEeehhHhHhccceEEEEEec
Q 036540 502 VGVPT---GGWTAIRFRADNPGVWFMHCHLELHTMWGLKMAFVVEN 544 (562)
Q Consensus 502 v~vpp---~g~~~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~~ 544 (562)
|.||+ ++|++|||++||||.|+|||||+||++.||+++|.+.+
T Consensus 426 v~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~ 471 (499)
T 3pxl_A 426 VSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDT 471 (499)
T ss_dssp EECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEESG
T ss_pred EEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEECh
Confidence 99997 99999999999999999999999999999999996544
No 6
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=3.9e-92 Score=748.41 Aligned_cols=457 Identities=29% Similarity=0.464 Sum_probs=356.5
Q ss_pred eEEEEEEEEEEEeecCCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCC-----CceEEecCccccCCCCCCCCCcc
Q 036540 30 VKKYQFDVQVKNVSRLCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQY-----NMSIHWHGLKQYRNGWADGPAYI 104 (562)
Q Consensus 30 ~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~-----~~siH~HG~~~~~~~~~DGv~~~ 104 (562)
...|+|+|++..+++||+.+.+|+|||++|||+||+++||+|+|+|+|.|++ +++|||||+++...+|+||++++
T Consensus 4 ~~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 83 (495)
T 3t6v_A 4 GPVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFI 83 (495)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred CCeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 3679999999999999999999999999999999999999999999999985 79999999999988999999999
Q ss_pred cccccCCCCeEEEEEEeCCCCCceEEecCchhhc-ccceeEEEEcCCCCCC-CCCCCCCcceEEEEeeccccCHHHHHHh
Q 036540 105 TQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLR-ATVYGAIVIMPKERTS-FPFPQPYQETNIILGEWWNSDVETIVNQ 182 (562)
Q Consensus 105 t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~-~Gl~G~iiV~~~~~~~-~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 182 (562)
|||+|+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++.+.. ..++..++|++|+++||+++....+
T Consensus 84 tq~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~--- 160 (495)
T 3t6v_A 84 TQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM--- 160 (495)
T ss_dssp TBCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS---
T ss_pred ccCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh---
Confidence 9999999999999999977999999999999998 9999999999876421 1122235678999999998866431
Q ss_pred cccCCCCCCCCCceeECCccCCCCCCC--CCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccCceE
Q 036540 183 GNKLGLPPQTSDAHTINGKSGPLFPCS--EKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTKPFT 260 (562)
Q Consensus 183 ~~~~g~~~~~~~~~~iNG~~~~~~~~~--~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~ 260 (562)
.+..+..+++++|||+.. +.|. ....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.
T Consensus 161 ---~~~~p~~~d~~liNG~g~--~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~ 235 (495)
T 3t6v_A 161 ---GAGGAITADSTLIDGLGR--THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELT 235 (495)
T ss_dssp ---CSSSCCCCSEEEETTBCC--BSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEE
T ss_pred ---ccCCCCCCcEEEECCcCc--CCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEE
Confidence 223344679999999953 2332 234578999999999999999999999999999999999999999999999
Q ss_pred EeEEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhccccccc
Q 036540 261 TQAILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNYSSKL 340 (562)
Q Consensus 261 ~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l 340 (562)
++++.|+|||||||+|++++++|+|+|++.+...+. .+.+....++|+|.++....+.. +..+ . . ........|
T Consensus 236 ~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~~p~~-~~~~-~-~--~~~~~~~~L 309 (495)
T 3t6v_A 236 VDEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGE-GFDGGINSAILRYDGATTADPVT-VAST-V-H--TKCLIETDL 309 (495)
T ss_dssp ESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSSCCCC-CCCS-S-C--SSBCCGGGC
T ss_pred eeeEEEcCceEEEEEEECCCCCceEEEEEecccCcc-ccCCCceEEEEEECCCCCCCCCC-CCCC-C-C--ccccccccc
Confidence 999999999999999999997799999998643332 22233457999998764322111 1101 0 0 000111234
Q ss_pred cCCCCCCCCC-CCCCCcceEEEEEeccCCCCCCCCCCCceeEEeecccccccCccccceeeeccccccccCCCCCCCCCc
Q 036540 341 RSLNTPQYPA-NVPLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNITFVMPKIGLLQAHYFNISGVFRTDFPDRPPVP 419 (562)
Q Consensus 341 ~~l~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~ 419 (562)
+++.....|. ..+..+|+++.+.+.+. +. .|++||++|..|+.|.|.+.+. |.+...
T Consensus 310 ~p~~~~~~p~~~~~~~~d~~~~l~~~~~---------~~--~w~iNg~s~~~~~~P~L~~~~~---g~~~~~-------- 367 (495)
T 3t6v_A 310 HPLSRNGVPGNPHQGGADCNLNLSLGFA---------CG--NFVINGVSFTPPTVPVLLQICS---GANTAA-------- 367 (495)
T ss_dssp CBSSCCCCSSCSSTTCSSEEEECCEEEE---------TT--EEEETTBCCCCCSSCHHHHHHT---TCCSST--------
T ss_pred cccccccCCCccCCCCCcEEEEEEEEec---------Cc--EEEEcCEecCCCCCcchhhhhc---CCcCcc--------
Confidence 4443322222 13345677776655432 12 5899999999887776554221 211100
Q ss_pred CcCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCcc
Q 036540 420 FNYTGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPER 499 (562)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~r 499 (562)
.......++.++.|++|||+|+|. ...+.||||||||+|+||+++. ...+|+.+|.||
T Consensus 368 ------------~~~~~~~v~~~~~g~~V~ivl~~n--~~~~~HP~HLHGh~F~vl~~~g--------~~~~n~~~P~~r 425 (495)
T 3t6v_A 368 ------------DLLPSGSVISLPSNSTIEIALPAG--AAGGPHPFHLHGHDFAVSESAS--------NSTSNYDDPIWR 425 (495)
T ss_dssp ------------TSSSTTSEEEECTTCEEEEEEECC--SSSCCCEEEETTCCEEEEECTT--------CCCCCSSSCCEE
T ss_pred ------------cccCCcceEEecCCCEEEEEEccC--CCCCCcceeecCCcEEEEecCC--------CCCcccCCCCCc
Confidence 001124578999999999999841 2377899999999999998641 235788899999
Q ss_pred ceeeecC-CCEEEEEEEecCceeEEEEeehhHhHhccceEEEEEec
Q 036540 500 NTVGVPT-GGWTAIRFRADNPGVWFMHCHLELHTMWGLKMAFVVEN 544 (562)
Q Consensus 500 DTv~vpp-~g~~~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~~ 544 (562)
|||.|++ ++|++|||++||||.|+|||||+||++.||+++|.+.+
T Consensus 426 Dtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~ 471 (495)
T 3t6v_A 426 DVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDI 471 (495)
T ss_dssp SEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETH
T ss_pred cEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECh
Confidence 9999997 89999999999999999999999999999999997554
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=3.7e-90 Score=746.91 Aligned_cols=471 Identities=26% Similarity=0.451 Sum_probs=360.2
Q ss_pred ccCceEEEEEEEEEEE--eecCCce-eeEEEEcCcCCCceEEEecCCEEEEEEEeCC-CCCceEEecCccccCCCCCCCC
Q 036540 26 ADAAVKKYQFDVQVKN--VSRLCNS-KPIVTVNGMFPGPTIYIREGDRVLINVTNHA-QYNMSIHWHGLKQYRNGWADGP 101 (562)
Q Consensus 26 ~~~~~~~~~l~~~~~~--~~~~g~~-~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l-~~~~siH~HG~~~~~~~~~DGv 101 (562)
..+++++|+|++++.. ++++|.. +.+|+|||++|||+||+++||+|+|+|+|.| .++++|||||+++...+|+||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 4677899999999999 8899999 9999999999999999999999999999999 6899999999999888889999
Q ss_pred CcccccccCC-CCeEEEEEEeCCCCCceEEecCchhhc-ccceeEEEEcCCCCCCCCCCCCCcce-EEEEeeccccCHHH
Q 036540 102 AYITQCPIKT-GNSYTYDFNVTGQRGTLWWHAHILWLR-ATVYGAIVIMPKERTSFPFPQPYQET-NIILGEWWNSDVET 178 (562)
Q Consensus 102 ~~~t~~~i~p-G~~~~y~~~~~~~~Gt~wyH~h~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~ 178 (562)
+++|||+|+| |++++|+|++ .++||||||||...|. +||+|+|||+++... .+|+|. +|+++||+++...+
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~-----~~d~d~~~l~l~Dw~~~~~~~ 182 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASL-----PYDIDLGVFPITDYYYRAADD 182 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHH
T ss_pred CccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcC-----CCcccceEEEEeccccCCHHH
Confidence 9999999999 9999999998 7899999999999888 899999999987653 247777 99999999998877
Q ss_pred HHHhcccCCCCCCCCCceeECCccCCCCCCC-CCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccC
Q 036540 179 IVNQGNKLGLPPQTSDAHTINGKSGPLFPCS-EKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTK 257 (562)
Q Consensus 179 ~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~-~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~ 257 (562)
+..... .+ .+..++.++|||+... .|. ....+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++
T Consensus 183 ~~~~~~-~~-~~~~~d~~liNG~~~~--~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~ 258 (559)
T 2q9o_A 183 LVHFTQ-NN-APPFSDNVLINGTAVN--PNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVN 258 (559)
T ss_dssp HHHHHT-TS-CCCCBSEEEETTBCBC--TTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEE
T ss_pred Hhhhhh-cC-CCCccceeEECCcccc--CcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccC
Confidence 654332 22 3446789999999863 353 234578999999999999999999999999999999999999999999
Q ss_pred ceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEee--cCCCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhcc
Q 036540 258 PFTTQAILIAPGQTTNVLVKADQSPSRYFMAARP--FMDAPIPVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALN 335 (562)
Q Consensus 258 p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~--~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~ 335 (562)
|+.++++.|+|||||||+|++++.+|.|+|++.. ...+ ....+....++|+|.+.....+.. +..+.. +.. +.+
T Consensus 259 p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~-~~~~~~~~~ail~y~~~~~~~P~~-~~~~~~-~~~-~~~ 334 (559)
T 2q9o_A 259 AMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAAC-GGSLNPHPAAIFHYAGAPGGLPTD-EGTPPV-DHQ-CLD 334 (559)
T ss_dssp EEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTT-CCBSSSCCEEEEEETTSCCSCCCC-CCCCCC-CCT-TCC
T ss_pred ceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEecccccc-CCCCCCceeEEEEECCCCCCCCCC-CCCcCC-Ccc-ccc
Confidence 9999999999999999999999877999999986 2222 222334568999998764321111 111110 100 000
Q ss_pred ccccccCCCCCCCCC-CCCCCcceEEEEEeccCCCCCCCCCCCceeEEeecccccccC-ccccceeeeccccccccCCCC
Q 036540 336 YSSKLRSLNTPQYPA-NVPLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNITFVMP-KIGLLQAHYFNISGVFRTDFP 413 (562)
Q Consensus 336 ~~~~l~~l~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~p-~~~~l~~~~~~~~g~~~~~~~ 413 (562)
. ..+.++.....|. ......+.++.+..... .+..+.|++||++|..+ ..|+|...+. |. ..|+
T Consensus 335 ~-~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~iNg~s~~~~~~~P~L~~~~~---g~--~~~~ 400 (559)
T 2q9o_A 335 T-LDVRPVVPRSVPVNSFVKRPDNTLPVALDLT--------GTPLFVWKVNGSDINVDWGKPIIDYILT---GN--TSYP 400 (559)
T ss_dssp C-SCCCBSSCCBCCCTTCCCCGGGEEEEEEECS--------SSSSCEEEETTBCCCCCTTSCHHHHHHH---TC--CCCC
T ss_pred c-cccccCCCCCCCCcccccceeEEEEEEeecC--------CCceEEEEECCEecccCCCCCcHhHhhc---CC--ccCC
Confidence 0 1122211111111 01112234444433211 12346799999999764 4565544221 11 0111
Q ss_pred CCCCCcCcCCCCCCCCCcCCCCceeeEEeec-CCEEEEEEEeCCC-CCCCCCCeeecCCCeEEEEecC---------CCC
Q 036540 414 DRPPVPFNYTGAPLTANLGTSLGTRLSKVAF-NSTIELVLQDTNL-LTVESHPFHLHGYNFFVVGSGI---------GNF 482 (562)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~ve~~l~n~~~-~~~~~HP~HlHG~~F~vl~~g~---------g~~ 482 (562)
.+..++.++. +++++|+++|... ...+.||||||||+|+||+++. |.|
T Consensus 401 ---------------------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~ 459 (559)
T 2q9o_A 401 ---------------------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVF 459 (559)
T ss_dssp ---------------------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCC
T ss_pred ---------------------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEeccccccccccccccc
Confidence 1245566654 5678888888531 0157899999999999999987 666
Q ss_pred CCCCCCCCCCCCCCCccceeeecCCCEEEEEEEecCceeEEEEeehhHhHhccceEEEEEecC
Q 036540 483 DPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRADNPGVWFMHCHLELHTMWGLKMAFVVENG 545 (562)
Q Consensus 483 ~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~~~ 545 (562)
++.++...+++.+|.|||||.||+++|++|||++||||.|||||||++|++.|||++|.|.+.
T Consensus 460 ~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~ 522 (559)
T 2q9o_A 460 DPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPA 522 (559)
T ss_dssp CHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred CccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcc
Confidence 654334567889999999999999999999999999999999999999999999999988654
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=9.4e-90 Score=736.06 Aligned_cols=469 Identities=31% Similarity=0.529 Sum_probs=358.2
Q ss_pred EEEEEEEEEEEeecCCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCC-----CCceEEecCccccCCCCCCCCCccc
Q 036540 31 KKYQFDVQVKNVSRLCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQ-----YNMSIHWHGLKQYRNGWADGPAYIT 105 (562)
Q Consensus 31 ~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-----~~~siH~HG~~~~~~~~~DGv~~~t 105 (562)
..|+|+++...+++||..+.+|+|||++ ||+||+++||+|+|+|+|.|+ ++++|||||+++...+|+||++++|
T Consensus 5 ~~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 5 SVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 4799999999999999999999999999 999999999999999999998 9999999999998888899999999
Q ss_pred ccccCCCCeEEEEEEeCCCCCceEEecCchhhc-ccceeEEEEcCCCCC-CCCCCCCCcceEEEEeeccccCHHHHHHhc
Q 036540 106 QCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLR-ATVYGAIVIMPKERT-SFPFPQPYQETNIILGEWWNSDVETIVNQG 183 (562)
Q Consensus 106 ~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~-~Gl~G~iiV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 183 (562)
||+|+||++++|+|++++++||||||||.+.|. +||+|+|||+++.+. +.+++..++|++|+++||+++...++.
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~--- 160 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ--- 160 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC---
T ss_pred cCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc---
Confidence 999999999999999768999999999999998 899999999987532 122322246999999999998765321
Q ss_pred ccCCCCCCCCCceeECCccCCCCCCCC-CcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccCceEEe
Q 036540 184 NKLGLPPQTSDAHTINGKSGPLFPCSE-KHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTKPFTTQ 262 (562)
Q Consensus 184 ~~~g~~~~~~~~~~iNG~~~~~~~~~~-~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d 262 (562)
+ ...++.++|||+.. +.|.. ...+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++|+.++
T Consensus 161 ---~--~~~~d~~liNG~~~--~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~ 233 (503)
T 1hfu_A 161 ---G--AAQPDATLINGKGR--YVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVD 233 (503)
T ss_dssp --------CCSEEEETTBCC--BTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEES
T ss_pred ---C--CCCCCEEEECcccc--cCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccC
Confidence 1 13468999999975 55643 3448999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCC---CCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhcccccc
Q 036540 263 AILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPI---PVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNYSSK 339 (562)
Q Consensus 263 ~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 339 (562)
++.|+|||||||+|++++.+|+|+|++........ .+.+....++|+|.+.....+ ..+..|...... ...
T Consensus 234 ~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p-~~~~~~~~~~l~-----~~~ 307 (503)
T 1hfu_A 234 RLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADP-TTSANPNPAQLN-----EAD 307 (503)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCC-CCCCCSSCCBCC-----GGG
T ss_pred eEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCC-CCCCCCccCCCc-----ccc
Confidence 99999999999999999877999999986432111 122223479999987654311 111111110000 112
Q ss_pred ccCCCCCCCCC-CCCCCcceEEEEEeccCCCCCCCCCCCceeEEeecccccccCccccceeeeccccccccCCCCCCCCC
Q 036540 340 LRSLNTPQYPA-NVPLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNITFVMPKIGLLQAHYFNISGVFRTDFPDRPPV 418 (562)
Q Consensus 340 l~~l~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~ 418 (562)
|+++.....|. ..+...+.++.+.+.. ++. .|++||++|..+..|.|.+.+. |.+..
T Consensus 308 l~p~~~~~~p~~~~~~~~~~~~~l~~~~---------~~~--~~~iNg~~~~~~~~P~l~~~~~---g~~~~-------- 365 (503)
T 1hfu_A 308 LHALIDPAAPGIPTPGAADVNLRFQLGF---------SGG--RFTINGTAYESPSVPTLLQIMS---GAQSA-------- 365 (503)
T ss_dssp CBBSSSCSCSSCSSTTCSSEEEECCEEE---------ETT--EEEETTBCCCCCSSCHHHHHHT---TCCSG--------
T ss_pred ccccCccCCCCcccCCcceEEEEEEeec---------cCc--eEEECCCccCCCCCcchhhhhc---CCccc--------
Confidence 33332222221 1122344444333221 122 5899999999887766554321 21100
Q ss_pred cCcCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCc
Q 036540 419 PFNYTGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPE 498 (562)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~ 498 (562)
.....+..++.++.|++|||+++|.. ..+.||||||||+|+||+++.+. .+++.+|.|
T Consensus 366 ------------~~~~~~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~~--------~~n~~~p~~ 423 (503)
T 1hfu_A 366 ------------NDLLPAGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGSS--------TYNFVNPVK 423 (503)
T ss_dssp ------------GGSSSTTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTCC--------CCCCSSBCE
T ss_pred ------------ccCCCCceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCCC--------ccccCCCCe
Confidence 00113457789999999999999532 26799999999999999997442 357789999
Q ss_pred cceeee-cCCCEEEEEEEecCceeEEEEeehhHhHhccceEEEEEecCCCCCCCCCCCC-CCCCCC
Q 036540 499 RNTVGV-PTGGWTAIRFRADNPGVWFMHCHLELHTMWGLKMAFVVENGKSPDQSIVPPP-KDLPPC 562 (562)
Q Consensus 499 rDTv~v-pp~g~~~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p-~~~~~c 562 (562)
||||.| ++++|++|||++||||.|+|||||+||++.|||++|.|.+.+. .++.++| ...+.|
T Consensus 424 rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~~--~~~~~~p~~~~~~C 487 (503)
T 1hfu_A 424 RDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANT--VDANNPPVEWAQLC 487 (503)
T ss_dssp ESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHHH--HHHCCCCHHHHHHH
T ss_pred eeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchhh--hhccCCChHHhhhc
Confidence 999999 9999999999999999999999999999999999999865432 2333333 445555
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=9.2e-83 Score=671.86 Aligned_cols=406 Identities=23% Similarity=0.351 Sum_probs=320.5
Q ss_pred ccCceEEEEEEEEEEEeecCCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccc
Q 036540 26 ADAAVKKYQFDVQVKNVSRLCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYIT 105 (562)
Q Consensus 26 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t 105 (562)
+.+.+++|+|+++...++++|..+.+|+|||++|||+||+++||+|+|+|+|.|+++++|||||+++.+ ++||++
T Consensus 12 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~--- 86 (439)
T 2xu9_A 12 SQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF--- 86 (439)
T ss_dssp CBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT---
T ss_pred cCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc---
Confidence 456789999999999999999999999999999999999999999999999999999999999999875 699986
Q ss_pred ccccCCCCeEEEEEEeC-CCCCceEEecCchh----hc-ccceeEEEEcCCCCCCCCCCCCCcceEEEEeeccccCHHHH
Q 036540 106 QCPIKTGNSYTYDFNVT-GQRGTLWWHAHILW----LR-ATVYGAIVIMPKERTSFPFPQPYQETNIILGEWWNSDVETI 179 (562)
Q Consensus 106 ~~~i~pG~~~~y~~~~~-~~~Gt~wyH~h~~~----~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~ 179 (562)
+.|+||++++|+|+++ +++||||||||.++ |. +||+|+|||+++.+.... ...++|++|+++||+++... .
T Consensus 87 -~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~-~~~~~e~~l~l~D~~~~~~~-~ 163 (439)
T 2xu9_A 87 -LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPE-LREAEEHLLVLKDLALQGGR-P 163 (439)
T ss_dssp -CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHH-HHTSEEEEEEEEEECEETTE-E
T ss_pred -ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCcc-CCCCCcEEEEEEeeeeCCCC-c
Confidence 4699999999999984 48999999999864 44 899999999987642111 13478999999999887531 0
Q ss_pred HHhcccCC-CCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCcc-C
Q 036540 180 VNQGNKLG-LPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYT-K 257 (562)
Q Consensus 180 ~~~~~~~g-~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~-~ 257 (562)
......+ .....++.++|||+.+ |.++|++| +|||||||+|+.+.+.|+|+||+|+||+.||.++ +
T Consensus 164 -~~~~~~~~~~g~~~~~~~iNG~~~----------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~ 231 (439)
T 2xu9_A 164 -APHTPMDWMNGKEGDLVLVNGALR----------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEE 231 (439)
T ss_dssp -CCCCHHHHHHCCCCSEEEETTEES----------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred -CCCCccccccCCCCCEEEECCccC----------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCC
Confidence 0000000 0112358899999986 78999999 9999999999999999999999999999999997 8
Q ss_pred ceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCCC--------------CCCcceEEEEEecCCCCCCCCCCCC
Q 036540 258 PFTTQAILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPIP--------------VDNKTVTAILQYKGIPNTVLPTLPS 323 (562)
Q Consensus 258 p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~~--------------~~~~~~~ail~y~~~~~~~~~~~p~ 323 (562)
|+.++++.|+|||||||+|++++ +|.|+|+|+.+..+... .......++++|.+..... .
T Consensus 232 p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~--- 305 (439)
T 2xu9_A 232 PLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPL--P--- 305 (439)
T ss_dssp EEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCCC--C---
T ss_pred ceEeceEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCccc--c---
Confidence 99999999999999999999998 79999999864332110 0123467888887643211 1
Q ss_pred CCCCCCchhhccccccccCCCCCCCCCCCCCCcceEEEEEeccCCCCCCCCCCCceeEEeecccccccCccccceeeecc
Q 036540 324 LPAPSDTNFALNYSSKLRSLNTPQYPANVPLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNITFVMPKIGLLQAHYFN 403 (562)
Q Consensus 324 ~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~p~~~~l~~~~~~ 403 (562)
+|... ..+..+ + .+ ..++++.+++.+. + ..|++||++|..+.
T Consensus 306 ~p~~l---------~~~~~l-----~--~~-~~~r~~~l~~~~~---------g--~~~~iNg~~~~~~~---------- 347 (439)
T 2xu9_A 306 LPKAL---------SPFPTL-----P--AP-VVTRRLVLTEDMM---------A--ARFFINGQVFDHRR---------- 347 (439)
T ss_dssp CCSCC---------CCCCCC-----C--CC-SEEEEEEEEEEGG---------G--TEEEETTBCCCTTC----------
T ss_pred CcccC---------CCcccC-----C--CC-CcceEEEEEeecc---------C--ceEeECCEECCCCC----------
Confidence 11100 001111 1 11 1246666655431 1 24889998774321
Q ss_pred ccccccCCCCCCCCCcCcCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCC
Q 036540 404 ISGVFRTDFPDRPPVPFNYTGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFD 483 (562)
Q Consensus 404 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~ 483 (562)
....++.|++|+|+|+|.+ .+.||||||||+||||+++.+.+
T Consensus 348 ----------------------------------~~~~~~~g~~~~~~~~N~~---~~~HP~HLHG~~F~Vl~~~g~~~- 389 (439)
T 2xu9_A 348 ----------------------------------VDLKGQAQTVEVWEVENQG---DMDHPFHLHVHPFQVLSVGGRPF- 389 (439)
T ss_dssp ----------------------------------CCEEECTTCEEEEEEEECS---SSCEEEEESSCCBEEEEETTEEC-
T ss_pred ----------------------------------CceecCCCCEEEEEEEcCC---CCCCCceeCCCcEEEEeeCCCCC-
Confidence 1145679999999999975 67999999999999999974432
Q ss_pred CCCCCCCCCCCCCCccceeeecCCCEEEEEEEecCceeEEEEeehhHhHhccceEEEEEe
Q 036540 484 PKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRADNPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 484 ~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
.+|.|||||.|+|+++++|||++||||.|+|||||++|+|.|||+.|+|.
T Consensus 390 ----------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 390 ----------PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp ----------SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred ----------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 37999999999999999999999999999999999999999999999873
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=2.1e-82 Score=669.67 Aligned_cols=406 Identities=18% Similarity=0.197 Sum_probs=317.7
Q ss_pred ceEEEEEEEEEEEeec-CCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccc
Q 036540 29 AVKKYQFDVQVKNVSR-LCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQC 107 (562)
Q Consensus 29 ~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~ 107 (562)
.+++|+|++++..+++ +|..+.+|+|||++|||+||+++||+|+|+|+|.|+++++|||||+++.+. +||++ ||
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~ 91 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---AR 91 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GG
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cC
Confidence 3578999999999988 799999999999999999999999999999999999999999999999887 99998 89
Q ss_pred ccCCCCeEEEEEEeCCCCCceEEecCchh----hc-ccceeEEEEcCCCCCCCCCCC--CCcceEEEEeeccccCHHHHH
Q 036540 108 PIKTGNSYTYDFNVTGQRGTLWWHAHILW----LR-ATVYGAIVIMPKERTSFPFPQ--PYQETNIILGEWWNSDVETIV 180 (562)
Q Consensus 108 ~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~----~~-~Gl~G~iiV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~ 180 (562)
+|+||++++|+|++++++||||||||.++ |. +||+|+|||+++.+...+++. .++|++|+++||+++....+.
T Consensus 92 ~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~ 171 (451)
T 2uxt_A 92 MMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE 171 (451)
T ss_dssp CBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE
T ss_pred cCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee
Confidence 99999999999999556999999999843 44 899999999988654333333 378999999999987544321
Q ss_pred HhcccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEE-cCcceEEEEeCCCcc-Cc
Q 036540 181 NQGNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAI-AGHNMTVVEIDAVYT-KP 258 (562)
Q Consensus 181 ~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l-~gh~~~via~DG~~~-~p 258 (562)
. ...+.....++.++|||+.+ |.++|++| +|||||||+|..+.+.|+| +||+|+||+.||.++ +|
T Consensus 172 ~--~~~~~~~~~~d~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P 238 (451)
T 2uxt_A 172 Y--NEPGSGGFVGDTLLVNGVQS----------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAP 238 (451)
T ss_dssp C--CCCSSSCCCCSEEEETTEES----------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEE
T ss_pred c--ccccCCCCcCCEEEECCccc----------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCc
Confidence 1 11222345679999999987 78999999 9999999999999999999 899999999999998 89
Q ss_pred eEEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCC-------CCCCcceEEEEEecCCCCCCCCCCCCCCCCCCch
Q 036540 259 FTTQAILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPI-------PVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTN 331 (562)
Q Consensus 259 ~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~-------~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~ 331 (562)
+.++++.|+|||||||+|++++ +|.|+|++........ ........++++|......... ...+|.
T Consensus 239 ~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-~~~~p~----- 311 (451)
T 2uxt_A 239 VSVKQLSLAPGERREILVDMSN-GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-TDSLPM----- 311 (451)
T ss_dssp EEESSEEECTTCEEEEEEECTT-CCCEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCCS-----
T ss_pred eEeceEEECceeEEEEEEEeCC-CCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc-cccCcc-----
Confidence 9999999999999999999997 6999999875332111 0122334678888765432111 011111
Q ss_pred hhccccccccCCCCCCCCCCCCCCcceEEEEEeccCCCCCCCCCCCceeEEeecccccccCccccceeeeccccccccCC
Q 036540 332 FALNYSSKLRSLNTPQYPANVPLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNITFVMPKIGLLQAHYFNISGVFRTD 411 (562)
Q Consensus 332 ~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~ 411 (562)
.|.++... + .+...++++.+ . + .|++||++|..+
T Consensus 312 -------~L~~~~~~--~--~~~~~~~~~~l--~-----------~---~~~iNg~~f~~~------------------- 345 (451)
T 2uxt_A 312 -------RLLPTEIM--A--GSPIRSRDISL--G-----------D---DPGINGQLWDVN------------------- 345 (451)
T ss_dssp -------CSSSSCCC--C--CCCSEEEEEEE--C-----------S---SSSBTTBCCCTT-------------------
T ss_pred -------ccCCCCCC--C--CCCcceEEEEE--e-----------e---EEEECCEeCCCC-------------------
Confidence 12222211 1 12223344433 1 1 378888876432
Q ss_pred CCCCCCCcCcCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCC
Q 036540 412 FPDRPPVPFNYTGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKF 491 (562)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~ 491 (562)
...+.++.|++|+|+|+|. +.||||||||+|+||+++.. .+
T Consensus 346 -------------------------~~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~Vl~~~G~---------~~ 386 (451)
T 2uxt_A 346 -------------------------RIDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQIRNVNGA---------MP 386 (451)
T ss_dssp -------------------------CCCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEEEEETTB---------CC
T ss_pred -------------------------CCcEEcCCCCEEEEEEECC-----CCcCeEECCceEEEEeeCCc---------CC
Confidence 1124668999999999994 58999999999999999521 24
Q ss_pred CCCCCCccceeeecCCCEEEEEEEecCcee----EEEEeehhHhHhccceEEEEEecCC
Q 036540 492 NLVDPPERNTVGVPTGGWTAIRFRADNPGV----WFMHCHLELHTMWGLKMAFVVENGK 546 (562)
Q Consensus 492 ~~~~p~~rDTv~vpp~g~~~irf~~dnpG~----w~~HCHil~H~d~GM~~~~~V~~~~ 546 (562)
++.+|.|||||.| +++++|+|++||||. |||||||++|+|.|||++|+|.+..
T Consensus 387 ~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 387 FPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp CGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred CcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 5568999999999 899999999999988 9999999999999999999998654
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=9.9e-81 Score=667.62 Aligned_cols=420 Identities=20% Similarity=0.273 Sum_probs=319.2
Q ss_pred eEEEEEEEEEEE--eecCCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccc
Q 036540 30 VKKYQFDVQVKN--VSRLCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQC 107 (562)
Q Consensus 30 ~~~~~l~~~~~~--~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~ 107 (562)
+++|+|++++.. +.++|..+.+|+|||++|||+||+++||+|+|+|+|.|+++++|||||+++... +||++ ||
T Consensus 36 ~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~--~DG~~---~~ 110 (534)
T 3abg_A 36 IWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAA--FDGWA---ED 110 (534)
T ss_dssp CEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCTT--TTTCS---SS
T ss_pred eEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCCC--CCCCC---CC
Confidence 478999999654 677898899999999999999999999999999999999999999999998764 99985 79
Q ss_pred ccCCCCeEEEEEEeCCCCCceEEecCchhhc-----ccceeEEEEcCCCCCCCCCCC--CCcceEEEEeeccccCHHHHH
Q 036540 108 PIKTGNSYTYDFNVTGQRGTLWWHAHILWLR-----ATVYGAIVIMPKERTSFPFPQ--PYQETNIILGEWWNSDVETIV 180 (562)
Q Consensus 108 ~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~-----~Gl~G~iiV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~ 180 (562)
+|+||++++|+|++.+++||||||||.++++ +||+|+|||+++.+...+++. .++|++|+++||++.....+.
T Consensus 111 ~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~ 190 (534)
T 3abg_A 111 ITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLV 190 (534)
T ss_dssp CBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBC
T ss_pred CCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCcee
Confidence 9999999999999866689999999998653 799999999998876555544 267899999999876543221
Q ss_pred HhcccCC-CCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcC-------cceEEEEeC
Q 036540 181 NQGNKLG-LPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAG-------HNMTVVEID 252 (562)
Q Consensus 181 ~~~~~~g-~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~g-------h~~~via~D 252 (562)
. ..+ .....++.++|||+.+ +.+.|++ ++|||||||+|+.+.+.|+|++ |+|+||++|
T Consensus 191 ~---~~~~~~~~~gd~~lvNG~~~----------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~D 256 (534)
T 3abg_A 191 T---TNGELNSFWGDVIHVNGQPW----------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASD 256 (534)
T ss_dssp C---CTTCSSCCCCSEEEETTEES----------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEET
T ss_pred c---cCCCCccccCceeccCCccC----------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeC
Confidence 1 111 1234578999999987 5688888 5999999999999999999987 999999999
Q ss_pred CCcc-CceEEeEEEeCCCceEEEEEEeCCCCC-eEEEEEeecCC-CCC-CCCCcceEEEEEecCCCCCCCCCCCCCCCCC
Q 036540 253 AVYT-KPFTTQAILIAPGQTTNVLVKADQSPS-RYFMAARPFMD-API-PVDNKTVTAILQYKGIPNTVLPTLPSLPAPS 328 (562)
Q Consensus 253 G~~~-~p~~~d~v~l~pgeR~dv~v~~~~~~G-~~~i~~~~~~~-~~~-~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~ 328 (562)
|.++ +|+.++++.|+|||||||+|++++.+| .|+|+...... +.. ..+.....++++|..............|
T Consensus 257 G~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P--- 333 (534)
T 3abg_A 257 SGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP--- 333 (534)
T ss_dssp TEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC---
T ss_pred CCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc---
Confidence 9864 999999999999999999999998667 69998753211 110 0111234588898754432100000111
Q ss_pred CchhhccccccccCCCCCCCCCCCCCCcceEEEEEeccCCCCCCCCCCCceeEEeecccccccCccccceeeeccccccc
Q 036540 329 DTNFALNYSSKLRSLNTPQYPANVPLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNITFVMPKIGLLQAHYFNISGVF 408 (562)
Q Consensus 329 ~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~ 408 (562)
..|+.+.. +. .+...++++.+ ... ...|++||++|..+..++
T Consensus 334 ---------~~L~~~~~---p~-~~~~~~~~~~~--~~~-----------~~~w~iNG~~f~~~~~p~------------ 375 (534)
T 3abg_A 334 ---------ANLRDVPF---PS-PTTNTPRQFRF--GRT-----------GPTWTINGVAFADVQNRL------------ 375 (534)
T ss_dssp ---------CCCCCCSC---CC-CCCCCCEEEEC--SCC-----------CSTTCCCCBTTBCTTSCC------------
T ss_pred ---------cccccCCC---CC-CccccceEEEE--ecc-----------CceeEECCcccCCCCCcc------------
Confidence 11222211 11 12223454433 111 124889998875331111
Q ss_pred cCCCCCCCCCcCcCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCC
Q 036540 409 RTDFPDRPPVPFNYTGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDP 488 (562)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~ 488 (562)
...++.|++|+|+|+|.+ ..+.||||||||+|+||+++.|.+. +
T Consensus 376 ------------------------------l~~v~~G~~~~w~i~N~~--~~~~HP~HLHG~~F~Vl~~~~g~~~--~-- 419 (534)
T 3abg_A 376 ------------------------------LANVPVGTVERWELINAG--NGWTHPIHIHLVDFKVISRTSGNNA--R-- 419 (534)
T ss_dssp ------------------------------CCEECTTCEEEEEEEECS--SSCCCCEEESSCCEEEEEESSCCSS--S--
T ss_pred ------------------------------eeeccCCCEEEEEEEcCC--CCCCcCEEECCeeEEEEEEcCCCCc--C--
Confidence 134568999999999965 2468999999999999999655432 1
Q ss_pred CCCCCCCCCccceeeecCCCEEEEEEE-ecCceeEEEEeehhHhHhccceEEEEEecCC
Q 036540 489 AKFNLVDPPERNTVGVPTGGWTAIRFR-ADNPGVWFMHCHLELHTMWGLKMAFVVENGK 546 (562)
Q Consensus 489 ~~~~~~~p~~rDTv~vpp~g~~~irf~-~dnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 546 (562)
...++.+ .|||||.|+|+++++|||+ +||||.|+|||||++|+|.|||+.|.|...+
T Consensus 420 ~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 420 TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 1234445 8999999999999999999 8999999999999999999999999998765
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=7.4e-80 Score=661.09 Aligned_cols=430 Identities=17% Similarity=0.235 Sum_probs=318.0
Q ss_pred ceEEEEEEEEEEEeec--CCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCC----------------------Cce
Q 036540 29 AVKKYQFDVQVKNVSR--LCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQY----------------------NMS 84 (562)
Q Consensus 29 ~~~~~~l~~~~~~~~~--~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~----------------------~~s 84 (562)
...+|+|++++...+. ++..+.+|+|||++|||+|||++||+|+|+|+|.|+. +|+
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 3456999999988654 4578999999999999999999999999999999975 899
Q ss_pred EEecCccccCCCCCCCCCc--ccccccCCCCeE---EEEEEeCCCCCceEEecCchh----hc-ccceeEEEEcCCCCCC
Q 036540 85 IHWHGLKQYRNGWADGPAY--ITQCPIKTGNSY---TYDFNVTGQRGTLWWHAHILW----LR-ATVYGAIVIMPKERTS 154 (562)
Q Consensus 85 iH~HG~~~~~~~~~DGv~~--~t~~~i~pG~~~---~y~~~~~~~~Gt~wyH~h~~~----~~-~Gl~G~iiV~~~~~~~ 154 (562)
|||||+++.+. +||+++ ++||+|+||++| +|+|++++++||||||||.++ |. +||+|+|||+++.+..
T Consensus 104 iHwHGl~~~~~--~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTPDD--SDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCCGG--GSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCCCc--cCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 99999999854 999996 789999999555 999998668999999999975 33 8999999999987665
Q ss_pred CCCCCCCcceEEEEeeccccCHHHHHHhcc----------cCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEE
Q 036540 155 FPFPQPYQETNIILGEWWNSDVETIVNQGN----------KLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTY 224 (562)
Q Consensus 155 ~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~----------~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~ 224 (562)
.+++..++|++|+++||+++....+..... ........++.++|||+.+ +.+++++| +|
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~----------p~~~v~~~-~~ 250 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW----------PYLEVEPR-KY 250 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES----------CEEECCSS-EE
T ss_pred ccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc----------ceEEecCC-EE
Confidence 556667899999999998765433211110 0011234578999999987 67899885 89
Q ss_pred EEEEEecCCCCeEEEEEcCc-ceEEEEeCCCcc-CceEEeEEEeCCCceEEEEEEeCCCCCeEE-EEEeecCCCCCCCCC
Q 036540 225 LLRIVNAALNDELFFAIAGH-NMTVVEIDAVYT-KPFTTQAILIAPGQTTNVLVKADQSPSRYF-MAARPFMDAPIPVDN 301 (562)
Q Consensus 225 rlRliN~~~~~~~~~~l~gh-~~~via~DG~~~-~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~-i~~~~~~~~~~~~~~ 301 (562)
||||||+|+.+.+.|+|+|| +|+|||+||.++ +|+.++++.|+|||||||+|++++.+|.+. +.... .+......
T Consensus 251 RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~--~~~~~~~~ 328 (513)
T 2wsd_A 251 RFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSA--GCGGDVNP 328 (513)
T ss_dssp EEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECC--CSSSSCCT
T ss_pred EEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecc--cccccCCC
Confidence 99999999999999999999 999999999998 899999999999999999999998668743 33321 11111122
Q ss_pred cceEEEEEecCCCCCCCCCCCCCCCCCCchhhccccccccCCCCCCCCCCCCCCcceEEEEEeccCCCCCCCCCCCceeE
Q 036540 302 KTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNYSSKLRSLNTPQYPANVPLRVDRHLFYTIGLGQNPCPSCQNGTQLT 381 (562)
Q Consensus 302 ~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 381 (562)
....++++|........+....+|. .+..+. ..+ ..+...++++.+...+.. .| ...
T Consensus 329 ~~~~~il~~~~~~~~~~~~~~~~p~------------~l~~~~--~~~-~~~~~~~~~~~l~~~~~~-------~g-~~~ 385 (513)
T 2wsd_A 329 ETDANIMQFRVTKPLAQKDESRKPK------------YLASYP--SVQ-HERIQNIRTLKLAGTQDE-------YG-RPV 385 (513)
T ss_dssp TTTTEEEEEECCSCCSSCCCCCCCS------------BCSCCG--GGC-CCCEEEEEEEEEEEEECT-------TS-CEE
T ss_pred CCCcceEEEEeccCcccCccCCCCc------------cccCCC--Ccc-cCCCcceEEEEEEeecCC-------CC-Cce
Confidence 2345788997653211111111111 011100 000 011223455555544322 22 235
Q ss_pred EeecccccccCccccceeeeccccccccCCCCCCCCCcCcCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCC
Q 036540 382 ASLNNITFVMPKIGLLQAHYFNISGVFRTDFPDRPPVPFNYTGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVE 461 (562)
Q Consensus 382 ~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~ 461 (562)
|.+||++|..+ ..+.++.|++|+|+|+|.+ .+
T Consensus 386 ~~iNg~~~~~~---------------------------------------------~~~~~~~g~~~~w~l~N~~---~~ 417 (513)
T 2wsd_A 386 LLLNNKRWHDP---------------------------------------------VTETPKVGTTEIWSIINPT---RG 417 (513)
T ss_dssp EEETTBCTTSC---------------------------------------------CCBCCBTTCEEEEEEEECS---SS
T ss_pred EeECCccCCCc---------------------------------------------ccEecCCCCEEEEEEEcCC---CC
Confidence 77888776422 0123468999999999975 67
Q ss_pred CCCeeecCCCeEEEEecCC---CCCCCC------CCCCCCCCCCCccceeeecCCCEEEEEEEe-cCceeEEEEeehhHh
Q 036540 462 SHPFHLHGYNFFVVGSGIG---NFDPKK------DPAKFNLVDPPERNTVGVPTGGWTAIRFRA-DNPGVWFMHCHLELH 531 (562)
Q Consensus 462 ~HP~HlHG~~F~vl~~g~g---~~~~~~------~~~~~~~~~p~~rDTv~vpp~g~~~irf~~-dnpG~w~~HCHil~H 531 (562)
.||||||||+|+||+++.+ .|++.. .+......++.|||||.|+|+++++|+|++ ||||.|+|||||++|
T Consensus 418 ~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H 497 (513)
T 2wsd_A 418 THPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEH 497 (513)
T ss_dssp CEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHH
T ss_pred CcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhh
Confidence 9999999999999998742 122110 000112234569999999999999999999 899999999999999
Q ss_pred HhccceEEEEEec
Q 036540 532 TMWGLKMAFVVEN 544 (562)
Q Consensus 532 ~d~GM~~~~~V~~ 544 (562)
+|.|||+.|+|.+
T Consensus 498 ~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 498 EDYDMMRPMDITD 510 (513)
T ss_dssp HTTTCEEEEEEBC
T ss_pred hhcCCceeEEEeC
Confidence 9999999999975
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.6e-78 Score=639.43 Aligned_cols=417 Identities=20% Similarity=0.301 Sum_probs=310.0
Q ss_pred ccCceEEEEEEEEEEEeec-CCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcc
Q 036540 26 ADAAVKKYQFDVQVKNVSR-LCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYI 104 (562)
Q Consensus 26 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~ 104 (562)
+.+.+++|+|++++..++. +|..+.+|+|||++|||+||+++||+|+|+|+|.|+++++|||||+++.+ ++||++
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~p-- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPP--DQDGSP-- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCCG--GGSCCT--
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccCC--ccCCCc--
Confidence 5678899999999999986 68899999999999999999999999999999999999999999999864 499996
Q ss_pred cccccCCCCeEEEEEEeCCC-CCceEEecCch----hhc-ccceeEEEEcCCCCCCCCCCCCCcceEEEEeeccccCHHH
Q 036540 105 TQCPIKTGNSYTYDFNVTGQ-RGTLWWHAHIL----WLR-ATVYGAIVIMPKERTSFPFPQPYQETNIILGEWWNSDVET 178 (562)
Q Consensus 105 t~~~i~pG~~~~y~~~~~~~-~Gt~wyH~h~~----~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 178 (562)
||+|+||++++|+|+++++ +||||||||.+ .|. +||+|+|||+++.+...++ ++++ ++++||+.+....
T Consensus 122 -q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 -HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp -TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSC
T ss_pred -cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCc
Confidence 8999999999999999433 89999999974 344 8999999999987654433 3455 9999998765432
Q ss_pred HHHhcccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCcc-C
Q 036540 179 IVNQGNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYT-K 257 (562)
Q Consensus 179 ~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~-~ 257 (562)
+.............++.++|||+.+ |.++|++|+ ||||||+|+.+.+.|+|+||+|+||++||.++ +
T Consensus 197 ~~~~~~~~~~~g~~gd~~lvNG~~~----------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~ 264 (481)
T 3zx1_A 197 IPNNNLNDWLNGREGEFVLINGQFK----------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEK 264 (481)
T ss_dssp CCCCCHHHHHHCCCCSEEEETTEES----------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEE
T ss_pred cccccchhhccCCcCCEEEECCccC----------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCC
Confidence 2100000000113468999999987 789999999 99999999999999999999999999998876 9
Q ss_pred ceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCCCC-CCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhccc
Q 036540 258 PFTTQAILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPIPV-DNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNY 336 (562)
Q Consensus 258 p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~~~-~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~ 336 (562)
|+.++++.|+|||||||+|++++ ++.|.|.+.......... .......++++..... .. .+|.
T Consensus 265 P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~---~lP~---------- 328 (481)
T 3zx1_A 265 TIYKEELFLSPASRVEVLIDAPK-DGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE--NV---ELPK---------- 328 (481)
T ss_dssp EEEESSEEECTTCEEEEEEECSS-CEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC--CC---CCCS----------
T ss_pred ceEeCeEEECCccEEEEEEEcCC-CcEEEEEEecccccCccccCCCCceeEEEEecCCC--Cc---cCCc----------
Confidence 99999999999999999999998 689999886432210000 1122344444442221 11 1111
Q ss_pred cccccCCCCCCCCCCCCCCcceEEEEEeccCCCCCCCCC-CCce-------eEEeecccccccCccccceeeeccccccc
Q 036540 337 SSKLRSLNTPQYPANVPLRVDRHLFYTIGLGQNPCPSCQ-NGTQ-------LTASLNNITFVMPKIGLLQAHYFNISGVF 408 (562)
Q Consensus 337 ~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~-~g~~-------~~~~~n~~~~~~p~~~~l~~~~~~~~g~~ 408 (562)
.|..+... ..+. ..+++.+...... ..... .+.. ..|+|||+.|..
T Consensus 329 --~l~~~~~~----~~~~-~~r~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~iNG~~~~~----------------- 382 (481)
T 3zx1_A 329 --NLKIFKPS----EEPK-EFKEIIMSEDHMQ--MHGMMGKSEGELKIALASMFLINRKSYDL----------------- 382 (481)
T ss_dssp --CSCCCCCC----CCCC-EEEEEEEEECCST--TTTGGGCCHHHHHHHHHTTEEETTBCCCT-----------------
T ss_pred --cccCCCCC----CCCC-cEEEEEEeccchh--cccccccccccccccccceeEECCEeCCC-----------------
Confidence 11111110 1111 3444444332210 00000 0000 126777765421
Q ss_pred cCCCCCCCCCcCcCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEec-CCCCCCCCC
Q 036540 409 RTDFPDRPPVPFNYTGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSG-IGNFDPKKD 487 (562)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g-~g~~~~~~~ 487 (562)
+...+.++.|++|+|+|.|.+ .+.|||||||+.|+|+++. .|.
T Consensus 383 ---------------------------~~~~~~~~~G~~v~w~l~N~~---~~~Hp~HlHG~~F~vl~~~~~g~------ 426 (481)
T 3zx1_A 383 ---------------------------KRIDLSSKLGVVEDWIVINKS---HMDHPFHIHGTQFELISSKLNGK------ 426 (481)
T ss_dssp ---------------------------TCCCEEEETTCCEEEEEEECS---SSCEEEEETTCCEEEEEEEETTE------
T ss_pred ---------------------------CCceEEeCCCCEEEEEEEcCC---CCceeEEEeccEEEEEEecccCC------
Confidence 122357789999999999965 7899999999999999983 111
Q ss_pred CCCCCCCCCCccceeeecCCCEEEEEEEecCceeEEEEeehhHhHhccceEEEEEe
Q 036540 488 PAKFNLVDPPERNTVGVPTGGWTAIRFRADNPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 488 ~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
......+.|||||.|+|+++++|+|++||||.|+|||||++|+|.|||..|+|+
T Consensus 427 --~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 427 --VQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp --EEECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred --CCCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 111235789999999999999999999999999999999999999999999996
No 14
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1.2e-78 Score=639.85 Aligned_cols=395 Identities=19% Similarity=0.297 Sum_probs=301.3
Q ss_pred eEEEEEEEEEEEeecCCceeeEEEEcCc-CCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccc
Q 036540 30 VKKYQFDVQVKNVSRLCNSKPIVTVNGM-FPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCP 108 (562)
Q Consensus 30 ~~~~~l~~~~~~~~~~g~~~~~~~~Ng~-~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~ 108 (562)
.++|+|++ |+|||+ +|||+||+++||+|+|+|+|.|+++++|||||+++.+ ++||+++ |+
T Consensus 20 ~~~~~l~~--------------~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~ 80 (448)
T 3aw5_A 20 ATYIEATA--------------SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FA 80 (448)
T ss_dssp CSEEEEET--------------TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GC
T ss_pred CcEEEEEE--------------EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---cc
Confidence 56677777 999999 9999999999999999999999999999999999975 4999986 99
Q ss_pred cCCCCeEEEEEEeCCCCCceEEecC----chhhc-ccceeEEEEcCCCCCCCCCCCCC-cceEEEEeeccccCHHHHHHh
Q 036540 109 IKTGNSYTYDFNVTGQRGTLWWHAH----ILWLR-ATVYGAIVIMPKERTSFPFPQPY-QETNIILGEWWNSDVETIVNQ 182 (562)
Q Consensus 109 i~pG~~~~y~~~~~~~~Gt~wyH~h----~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~-~e~~l~~~d~~~~~~~~~~~~ 182 (562)
|+||++++|+|++++++|||||||| ...|. +||+|+|||+++.+. .+++ ++ +|++|+++||+++. .++...
T Consensus 81 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~ 157 (448)
T 3aw5_A 81 ITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYN 157 (448)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECC
T ss_pred CCCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-Cccccc
Confidence 9999999999999558999999999 45566 899999999998765 3332 35 89999999998876 332110
Q ss_pred c-ccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEE--cC---cceEEEEeCCCcc
Q 036540 183 G-NKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAI--AG---HNMTVVEIDAVYT 256 (562)
Q Consensus 183 ~-~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l--~g---h~~~via~DG~~~ 256 (562)
. ...+.....++.++|||+.+ +.++|++| +|||||||+|+.+.+.|+| +| |+|+|||+||.++
T Consensus 158 ~~~~~~~~~~~~~~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~ 226 (448)
T 3aw5_A 158 PTPMEMIAGFLGNAVLVNGVKD----------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFL 226 (448)
T ss_dssp CCHHHHHHCCCCSEEEETTEET----------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEE
T ss_pred ccccccccCccccEEEECCccc----------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCcc
Confidence 0 00001123568999999987 78999999 9999999999999999999 99 9999999999999
Q ss_pred C-ceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCC----------CCCCcceEEEEEecCCCCCCCCCCCCCC
Q 036540 257 K-PFTTQAILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPI----------PVDNKTVTAILQYKGIPNTVLPTLPSLP 325 (562)
Q Consensus 257 ~-p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~----------~~~~~~~~ail~y~~~~~~~~~~~p~~p 325 (562)
+ |+.++++.|+|||||||+|++++ +.|+|++.....+.. ........++++|.+....+. |
T Consensus 227 ~~P~~~~~l~l~pgeR~dvlv~~~~--~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p 298 (448)
T 3aw5_A 227 ARPIEVRALFLAPAERAEVVVELGE--GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP------V 298 (448)
T ss_dssp EEEEEESCEEECTTCEEEEEEEECS--EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC------C
T ss_pred CCceEeceEEECCcceEEEEEECCC--CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC------c
Confidence 6 99999999999999999999984 799999876543211 111233567778865433211 1
Q ss_pred CCCCchhhccccccccCCCCCCCCCCCCCCcceEEEEEeccCCCCCCCCCCCceeEEeecccccccCccccceeeecccc
Q 036540 326 APSDTNFALNYSSKLRSLNTPQYPANVPLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNITFVMPKIGLLQAHYFNIS 405 (562)
Q Consensus 326 ~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~p~~~~l~~~~~~~~ 405 (562)
. .|..+... .++...++++.+..+. ..|++||++|..+.
T Consensus 299 ~------------~L~~lp~~----~~~~~~~~~~~l~~~~-------------~~~~iNg~~~~~~~------------ 337 (448)
T 3aw5_A 299 E------------ALSDPPPE----PPKPTRTRRFALSLSG-------------MQWTINGMFWNASN------------ 337 (448)
T ss_dssp C------------CCSCCCCC----CCCCSEEEEEEEEEET-------------TEEEETTBCCCTTC------------
T ss_pred c------------ccCCCCCC----CCCCCceEEEEEeCCC-------------ceeeECCCcCCCCC------------
Confidence 0 01111111 1233345666554321 24899998774310
Q ss_pred ccccCCCCCCCCCcCcCCCCCCCCCcCCCCceeeEE-eecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCC
Q 036540 406 GVFRTDFPDRPPVPFNYTGAPLTANLGTSLGTRLSK-VAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDP 484 (562)
Q Consensus 406 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~ 484 (562)
..+. ++.|++|+|+|+|.+ ..+.||||||||+||||+++ |.+..
T Consensus 338 --------------------------------p~~~~~~~g~~v~~~i~N~~--~~~~HP~HLHG~~F~Vl~~~-G~~~~ 382 (448)
T 3aw5_A 338 --------------------------------PLFEHVSVEGVELWEIVNDK--ASMPHPMHLHGFPMWIIERK-DSPRQ 382 (448)
T ss_dssp --------------------------------TTCCCEEECEEEEEEEEECS--SSCCEEEEESSSCBEEEEEE-SCCHH
T ss_pred --------------------------------CceeccCCCCeEEEEEEcCC--CCCCcCEEECCceEEEEEec-CCCcc
Confidence 0123 578999999999964 25789999999999999985 44321
Q ss_pred CCCCCCC----CCCCCCccceeeecCCCEEEEE--EE---ecCceeEEEEeehhHhHhccceEEEEEe
Q 036540 485 KKDPAKF----NLVDPPERNTVGVPTGGWTAIR--FR---ADNPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 485 ~~~~~~~----~~~~p~~rDTv~vpp~g~~~ir--f~---~dnpG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
......+ +..++.|||||.|+|+++++|+ |+ +||| |+|||||++|+|.|||++|+|.
T Consensus 383 ~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 383 VAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp HHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred cccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 1111122 2335579999999999999665 88 8999 9999999999999999999873
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=2e-77 Score=661.06 Aligned_cols=464 Identities=19% Similarity=0.243 Sum_probs=309.2
Q ss_pred cCceEEEEEEEEEEEee--cCCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCC----------------------
Q 036540 27 DAAVKKYQFDVQVKNVS--RLCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYN---------------------- 82 (562)
Q Consensus 27 ~~~~~~~~l~~~~~~~~--~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~---------------------- 82 (562)
....+.|+|++++...+ +++....+|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 29 ~~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~ 108 (612)
T 3gyr_A 29 DEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNT 108 (612)
T ss_dssp SCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGG
T ss_pred CCCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccc
Confidence 34567899999888765 455678999999999999999999999999999999644
Q ss_pred -------------------ceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCCCceEEecCchh----hc-
Q 036540 83 -------------------MSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILW----LR- 138 (562)
Q Consensus 83 -------------------~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~----~~- 138 (562)
++|||||+++.+. +||++ ||+|+||++|+|+|++++++||||||+|.++ |.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~~--~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~ 183 (612)
T 3gyr_A 109 EPGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVM 183 (612)
T ss_dssp SCSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTT
T ss_pred cccccccccccccccCCCCceEEcCCCccCCc--ccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhh
Confidence 6789999998654 89876 9999999999999999667899999999854 45
Q ss_pred ccceeEEEEcCCCCCCCCCCCCCcceEEEEeeccccCHHHHHHhcc-------------cC---CCCCCCCCceeECCcc
Q 036540 139 ATVYGAIVIMPKERTSFPFPQPYQETNIILGEWWNSDVETIVNQGN-------------KL---GLPPQTSDAHTINGKS 202 (562)
Q Consensus 139 ~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~-------------~~---g~~~~~~~~~~iNG~~ 202 (562)
+||+|+|||+++.+..++++..++|++|+|+||+++.......... .. ......++.++|||+.
T Consensus 184 ~Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~ 263 (612)
T 3gyr_A 184 AGLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI 263 (612)
T ss_dssp TTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE
T ss_pred ccceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCc
Confidence 8999999999988777777778999999999997654322111000 00 0123456889999998
Q ss_pred CCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCc-------ceEEEEeCCCcc-CceEE------eEEEeCC
Q 036540 203 GPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGH-------NMTVVEIDAVYT-KPFTT------QAILIAP 268 (562)
Q Consensus 203 ~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh-------~~~via~DG~~~-~p~~~------d~v~l~p 268 (562)
+ |.+.++. ++|||||||+|+.+.+.|+|++| +|+|||+||.++ +|+.+ ++|.|+|
T Consensus 264 ~----------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~p 332 (612)
T 3gyr_A 264 W----------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAP 332 (612)
T ss_dssp S----------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECT
T ss_pred c----------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEecc
Confidence 7 6788876 58999999999999999999998 499999999998 57665 4899999
Q ss_pred CceEEEEEEeCCCCCeEEEEEeecCCCCC----CCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhccccccccCCC
Q 036540 269 GQTTNVLVKADQSPSRYFMAARPFMDAPI----PVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNYSSKLRSLN 344 (562)
Q Consensus 269 geR~dv~v~~~~~~G~~~i~~~~~~~~~~----~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~ 344 (562)
||||||+|++++.+|.++........... .........+++|.......... ..+|...... ....
T Consensus 333 GeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~--------~~~~- 402 (612)
T 3gyr_A 333 AERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDS-FALPEVLSGS--------FRRM- 402 (612)
T ss_dssp TCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCC-CCCCSSCCSS--------CCCC-
T ss_pred ceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCc-cccccccccc--------cccc-
Confidence 99999999999976665544432111111 11122345666766433321111 1111100000 0000
Q ss_pred CCCCCCCCCCCcceEEEEEeccCCCCCCCCCCCceeEEeeccc----ccccCccccceeeeccccccccCCCCCCCCCcC
Q 036540 345 TPQYPANVPLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNI----TFVMPKIGLLQAHYFNISGVFRTDFPDRPPVPF 420 (562)
Q Consensus 345 ~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~----~~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~ 420 (562)
...++. ..+...+...... ........+.+... .+..+....+.... .++ ....+
T Consensus 403 ----~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------~~~~~ 461 (612)
T 3gyr_A 403 ----SHDIPH-GHRLIVLTPPGTK-----GSGGHPEIWEMAEVEDPADVQVPAEGVIQVTG--ADG---------RTKTY 461 (612)
T ss_dssp ----CTTSCC-EEEEEEEECTTCT-----TTTTCCEEEEEEECC-----CCSCTTEEEEEC--TTS---------CEEEE
T ss_pred ----cccccc-ccccccccccccc-----cccccccccccccccccccccccccceeeecc--CCC---------ccccc
Confidence 000110 0111111110000 00001111111111 00011100000000 000 00001
Q ss_pred cCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCC--------------
Q 036540 421 NYTGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKK-------------- 486 (562)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~-------------- 486 (562)
..++ ....+...+.++.|++|+|+|+|.+ .+.||||||||+||||+++.+.++...
T Consensus 462 ~~n~-------~~~~~~~~~~~~~g~~~~w~i~N~~---~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~ 531 (612)
T 3gyr_A 462 RRTA-------RTFNDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDP 531 (612)
T ss_dssp EEEE-------CSTTSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEE
T ss_pred cccC-------ccCCCCcceEeCCCCEEEEEEEcCC---CCCcCEeECCCcEEEEeecCCcCcccccccccccccccccc
Confidence 1100 1112234467889999999999976 779999999999999998643322110
Q ss_pred -CCCCCCCCCCCccceeeecCCCEEEEEEE-ecCceeEEEEeehhHhHhccceEEEEEecCCC
Q 036540 487 -DPAKFNLVDPPERNTVGVPTGGWTAIRFR-ADNPGVWFMHCHLELHTMWGLKMAFVVENGKS 547 (562)
Q Consensus 487 -~~~~~~~~~p~~rDTv~vpp~g~~~irf~-~dnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 547 (562)
.....+..++.|||||.|+++++++|||+ +||||.||||||||+|||.|||+.|+|.+++.
T Consensus 532 ~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 532 DTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp EEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred ccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 01234567789999999999999999999 69999999999999999999999999987643
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=2.8e-76 Score=621.87 Aligned_cols=422 Identities=21% Similarity=0.288 Sum_probs=306.4
Q ss_pred CceEEEEEEEEEEEeecCCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccc
Q 036540 28 AAVKKYQFDVQVKNVSRLCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQC 107 (562)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~ 107 (562)
...+.|+|++++..++++|..+.+|+|||++|||+||+++||+|+|+|+|.|+++++|||||+++.+. +||++ ||
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~p---~~ 89 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGE--VDGGP---QG 89 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCHH--HHCCT---TC
T ss_pred CCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCcc--cCCCC---cC
Confidence 45678999999999999999999999999999999999999999999999999999999999999764 99987 89
Q ss_pred ccCCCCeEEEEEEeCCCCCceEEecCchh----hc-ccceeEEEEcCCCCCCCCCCC--CCcceEEEEeeccccCHHHHH
Q 036540 108 PIKTGNSYTYDFNVTGQRGTLWWHAHILW----LR-ATVYGAIVIMPKERTSFPFPQ--PYQETNIILGEWWNSDVETIV 180 (562)
Q Consensus 108 ~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~----~~-~Gl~G~iiV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~ 180 (562)
+|.||++++|+|++++++||||||||.++ |. +||+|+|||+++.+...+++. ..+|++++++||+++....+.
T Consensus 90 ~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~ 169 (488)
T 3od3_A 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQID 169 (488)
T ss_dssp CBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBC
T ss_pred cCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCcee
Confidence 99999999999999656899999999854 44 899999999988765444433 246899999999886543211
Q ss_pred Hhcc-cCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEE-cCcceEEEEeCCCcc-C
Q 036540 181 NQGN-KLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAI-AGHNMTVVEIDAVYT-K 257 (562)
Q Consensus 181 ~~~~-~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l-~gh~~~via~DG~~~-~ 257 (562)
.... ........++.++|||+.+ |.+.+ +|++|||||||+|+.+.+.|+| +||+|+|||+||.++ +
T Consensus 170 ~~~~~~~~~~g~~gd~~lvNG~~~----------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~ 238 (488)
T 3od3_A 170 YQLDVMTAAVGWFGDTLLTNGAIY----------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPE 238 (488)
T ss_dssp CCCSHHHHHHCCCCSEEEETTBSS----------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEE
T ss_pred ccccccccccCCCCCEEEEcCCcC----------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccC
Confidence 0000 0000123568999999987 45655 5689999999999999999999 699999999999987 8
Q ss_pred ceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCC---CCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhc
Q 036540 258 PFTTQAILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPI---PVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFAL 334 (562)
Q Consensus 258 p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~ 334 (562)
|+.++++.|+|||||||+|++++ .+.|.+.+........ .+. ....+++.......... .+|.
T Consensus 239 P~~~~~l~l~pGeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~---~~P~-------- 304 (488)
T 3od3_A 239 PVKVSELPVLMGERFEVLVEVND-NKPFDLVTLPVSQMGMAIAPFD--KPHPVMRIQPIAISASG---ALPD-------- 304 (488)
T ss_dssp EEEESCEEECTTCEEEEEEEECT-TCCEEEEECCCSSTTTTSTTTT--SCEEEEEEEEEEEECCC---CCCS--------
T ss_pred ccEeceEEECCCCEEEEEEEeCC-CceEEEEEeccCCCCccccccc--CccceeEecccccCCCC---CCCc--------
Confidence 99999999999999999999998 5889998764321110 111 12233333321110001 1111
Q ss_pred cccccccCCCCCCCCCCCCCCcceEEEEEecc-------------------CC------------CCCCCCCCCcee---
Q 036540 335 NYSSKLRSLNTPQYPANVPLRVDRHLFYTIGL-------------------GQ------------NPCPSCQNGTQL--- 380 (562)
Q Consensus 335 ~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~-------------------~~------------~~~~~~~~g~~~--- 380 (562)
.|..+. ..+ .+.....+++.+.+.. .. ........|..+
T Consensus 305 ----~L~~~~--~~~-~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~ 377 (488)
T 3od3_A 305 ----TLSSLP--ALP-SLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFH 377 (488)
T ss_dssp ----CCCCCC--CCC-CCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGG
T ss_pred ----ccccCC--CCc-ccccccceEEEEEecccccccccccccccccccccccccccccccccccCcccccccccccccc
Confidence 011110 001 1112235666554320 00 000000011111
Q ss_pred -EEeecccccccCccccceeeeccccccccCCCCCCCCCcCcCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCC
Q 036540 381 -TASLNNITFVMPKIGLLQAHYFNISGVFRTDFPDRPPVPFNYTGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLT 459 (562)
Q Consensus 381 -~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~ 459 (562)
.|.|||++|... ...+.++.|++|+|+|.|.+ +
T Consensus 378 ~~~~ING~~~~~~--------------------------------------------~~~~~~~~G~~e~w~l~N~~--~ 411 (488)
T 3od3_A 378 HANKINGQAFDMN--------------------------------------------KPMFAAAKGQYERWVISGVG--D 411 (488)
T ss_dssp GCEEETTBCCCTT--------------------------------------------CCSEECCBSSCEEEEEECTT--C
T ss_pred ceeeECCeeCCCC--------------------------------------------CCceEcCCCCEEEEEEEeCC--C
Confidence 256776655311 12256789999999999975 2
Q ss_pred CCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEec----CceeEEEEeehhHhHhcc
Q 036540 460 VESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRAD----NPGVWFMHCHLELHTMWG 535 (562)
Q Consensus 460 ~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d----npG~w~~HCHil~H~d~G 535 (562)
.+.|||||||++|+|++++... ....++.|||||.|+ ++++.|+|++| +||.|||||||++|||.|
T Consensus 412 ~~~Hp~HlHg~~F~Vl~~~g~~---------~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~G 481 (488)
T 3od3_A 412 MMLHPFHIHGTQFRILSENGKP---------PAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTG 481 (488)
T ss_dssp CCCEEEEETTCCBEEEEBTTBC---------CCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTT
T ss_pred CCCccEEEcCceEEEeccCCCc---------cccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcC
Confidence 5689999999999999985221 112346799999999 99999999985 568999999999999999
Q ss_pred ceEEEEE
Q 036540 536 LKMAFVV 542 (562)
Q Consensus 536 M~~~~~V 542 (562)
||..|+|
T Consensus 482 Mm~~f~V 488 (488)
T 3od3_A 482 MMLGFTV 488 (488)
T ss_dssp CEEEEEC
T ss_pred CcEEEEC
Confidence 9999976
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=5e-75 Score=627.42 Aligned_cols=439 Identities=20% Similarity=0.247 Sum_probs=314.3
Q ss_pred CceEEEEEEEEEEEeec--CCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCC-----------------------
Q 036540 28 AAVKKYQFDVQVKNVSR--LCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYN----------------------- 82 (562)
Q Consensus 28 ~~~~~~~l~~~~~~~~~--~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~----------------------- 82 (562)
...++|+|++++..... ++..+.+|+|||++|||+|+|++||+|+|+++|+|+..
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 45688999999998764 45689999999999999999999999999999999753
Q ss_pred ------------------ceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCCCceEEecCchh----hc-c
Q 036540 83 ------------------MSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILW----LR-A 139 (562)
Q Consensus 83 ------------------~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~----~~-~ 139 (562)
+++||||+++.+. +||++ ||+|+||++++|+|++.+++||||||||.++ |. +
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~ 184 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhc
Confidence 8999999999876 99986 8999999999999998668999999999976 44 8
Q ss_pred cceeEEEEcCCCCCCCCCCCCCcceEEEEeeccccCHHH-HHH-h------ccc----CCCC----CCCCCceeECCccC
Q 036540 140 TVYGAIVIMPKERTSFPFPQPYQETNIILGEWWNSDVET-IVN-Q------GNK----LGLP----PQTSDAHTINGKSG 203 (562)
Q Consensus 140 Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-~~~-~------~~~----~g~~----~~~~~~~~iNG~~~ 203 (562)
||+|+|||+++.+...+++.+++|++|+++||+++.... .+. . ... .++. +..++.++|||+.+
T Consensus 185 GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~ 264 (612)
T 2g23_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC
Confidence 999999999987666666678999999999999864321 000 0 000 1111 24679999999987
Q ss_pred CCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCc-------ceEEEEeCCCcc-CceEEe------EEEeCCC
Q 036540 204 PLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGH-------NMTVVEIDAVYT-KPFTTQ------AILIAPG 269 (562)
Q Consensus 204 ~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh-------~~~via~DG~~~-~p~~~d------~v~l~pg 269 (562)
|.++|++| +|||||||+|+.+.+.|+|++| +|+|||+||.++ +|+.++ +|.|+||
T Consensus 265 ----------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pg 333 (612)
T 2g23_A 265 ----------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPA 333 (612)
T ss_dssp ----------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTT
T ss_pred ----------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCc
Confidence 77999999 9999999999999999999999 899999999999 699999 9999999
Q ss_pred ceEEEEEEeCCCCC-eEEEEEeecCCCCCCC---CCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhccccccccCCCC
Q 036540 270 QTTNVLVKADQSPS-RYFMAARPFMDAPIPV---DNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNYSSKLRSLNT 345 (562)
Q Consensus 270 eR~dv~v~~~~~~G-~~~i~~~~~~~~~~~~---~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~ 345 (562)
|||||+|++++.+| +|+|+........... +......++++......... ...+|.. |... .
T Consensus 334 eR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~-~~~~P~~------------L~~~-~ 399 (612)
T 2g23_A 334 ERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEED-SFALPEV------------LSGS-F 399 (612)
T ss_dssp CEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCC-CCCCCSS------------CCSS-C
T ss_pred CeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCC-CCCCChh------------hccc-c
Confidence 99999999998666 6888765311111000 01111356666643322110 0111210 1100 0
Q ss_pred CCCCCCCCCCcceEEEEEe---ccCCCCCC------------------------CCCCCceeEEeecccccccCccccce
Q 036540 346 PQYPANVPLRVDRHLFYTI---GLGQNPCP------------------------SCQNGTQLTASLNNITFVMPKIGLLQ 398 (562)
Q Consensus 346 ~~~p~~~p~~~~~~~~~~~---~~~~~~~~------------------------~~~~g~~~~~~~n~~~~~~p~~~~l~ 398 (562)
+..+..++. .+++.+.. .......+ ...+|....|++|++.|.
T Consensus 400 ~~l~~~~~~--~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~-------- 469 (612)
T 2g23_A 400 RRMSHDIPH--GHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFN-------- 469 (612)
T ss_dssp CCCCTTSCC--EEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTT--------
T ss_pred ccCCccccc--ceeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCC--------
Confidence 000001111 11211110 00000000 000111122333332221
Q ss_pred eeeccccccccCCCCCCCCCcCcCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEec
Q 036540 399 AHYFNISGVFRTDFPDRPPVPFNYTGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSG 478 (562)
Q Consensus 399 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g 478 (562)
....+.++.|++|+|+|.|.+ .+.|||||||+.|+|++++
T Consensus 470 -------------------------------------~~~~~~v~~G~~v~w~l~N~~---~~~HPiHlHg~~F~Vl~r~ 509 (612)
T 2g23_A 470 -------------------------------------DGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRD 509 (612)
T ss_dssp -------------------------------------SCCCEEEETTCEEEEEEEECS---SSCEEEEESSCCEEEEEEE
T ss_pred -------------------------------------CCCceEecCCCEEEEEEEeCC---CCCCCeEEcCceEEEeccc
Confidence 123367889999999999975 7799999999999999985
Q ss_pred CCC---CCCCCC------------CCCCCCCCCCccceeeecCCCEEEEEEEec-CceeEEEEeehhHhHhccceEEEEE
Q 036540 479 IGN---FDPKKD------------PAKFNLVDPPERNTVGVPTGGWTAIRFRAD-NPGVWFMHCHLELHTMWGLKMAFVV 542 (562)
Q Consensus 479 ~g~---~~~~~~------------~~~~~~~~p~~rDTv~vpp~g~~~irf~~d-npG~w~~HCHil~H~d~GM~~~~~V 542 (562)
.+. |+.... ....+..++.|||||.|+|+++++|+|+++ |||.|||||||++|+|.|||+.|+|
T Consensus 510 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V 589 (612)
T 2g23_A 510 AYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVV 589 (612)
T ss_dssp EEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEE
T ss_pred CcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEE
Confidence 322 111100 022345567899999999999999999999 9999999999999999999999999
Q ss_pred ecCC
Q 036540 543 ENGK 546 (562)
Q Consensus 543 ~~~~ 546 (562)
.+.+
T Consensus 590 ~p~~ 593 (612)
T 2g23_A 590 MPPE 593 (612)
T ss_dssp ECHH
T ss_pred Cchh
Confidence 8643
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=1.7e-53 Score=428.58 Aligned_cols=271 Identities=25% Similarity=0.427 Sum_probs=226.5
Q ss_pred ceEEEEEEEEEEEeec-CCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccc
Q 036540 29 AVKKYQFDVQVKNVSR-LCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQC 107 (562)
Q Consensus 29 ~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~ 107 (562)
.+++|+|++++..+++ +|..+.+|+|||++|||+|||++||+|+|+|+|.++.+++|||||+++....++||+++++||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4799999999999887 478889999999999999999999999999999999999999999999887779999999999
Q ss_pred ccCCCCeEEEEEEeCCCCCceEEecCchhhc----ccceeEEEEcCCCCCCCCCCCCCcceEEEEeeccccCHHHHHHhc
Q 036540 108 PIKTGNSYTYDFNVTGQRGTLWWHAHILWLR----ATVYGAIVIMPKERTSFPFPQPYQETNIILGEWWNSDVETIVNQG 183 (562)
Q Consensus 108 ~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~----~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 183 (562)
+|+||++++|+|++ +++||||||||...+. +||+|+|||+++...+.+. ..++|++|+++||++..... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~----~ 154 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANK----P 154 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTC----T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeeccccccc----c
Confidence 99999999999998 7999999999997654 6999999999876432111 35889999999998753211 1
Q ss_pred ccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCcc-CceEEe
Q 036540 184 NKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYT-KPFTTQ 262 (562)
Q Consensus 184 ~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~-~p~~~d 262 (562)
...+.....++.++|||+.++. ...+++++|++|||||+|++. ..|+||||||.|+||+.||.++ +|..+|
T Consensus 155 ~~~~~~~~~~d~~~ING~~~~~-------~~~l~v~~G~~vrlrliN~~~-~~h~~hlhGh~f~vi~~dG~~~~~p~~~d 226 (318)
T 3g5w_A 155 GEGGIPGDVFDYYTINAKSFPE-------TQPIRVKKGDVIRLRLIGAGD-HVHAIHTHGHISQIAFKDGFPLDKPIKGD 226 (318)
T ss_dssp TCCCCTTCCCCEEEETTBCBTS-------SCCEEECTTCEEEEEEEECSS-SCEEEEETTSCEEEEEETTEEEEEEEEES
T ss_pred ccCCCCCCcCcEEEEcCcCCCC-------CccEEeCCCCEEEEEEEeCCC-ceEEEEECCcEEEEEecCCcccCCCcccc
Confidence 1112222346889999998742 245899999999999999994 5899999999999999999988 899999
Q ss_pred EEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCC-CCCCcceEEEEEecCCC
Q 036540 263 AILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPI-PVDNKTVTAILQYKGIP 314 (562)
Q Consensus 263 ~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~-~~~~~~~~ail~y~~~~ 314 (562)
++.|.||||+||++++++ ||.|.+|||....... ........++|+|.+..
T Consensus 227 tv~l~pger~~v~~~a~~-pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 227 TVLIGPGERYDVILNMDN-PGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEECTTCEEEEEEECCS-CSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEECCCCEEEEEEECCC-CeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999999999998 7999999996432211 01123457889998754
No 19
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=2.2e-55 Score=486.73 Aligned_cols=237 Identities=16% Similarity=0.193 Sum_probs=180.0
Q ss_pred EEEEEEEEeecC-CceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCc--------c
Q 036540 34 QFDVQVKNVSRL-CNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAY--------I 104 (562)
Q Consensus 34 ~l~~~~~~~~~~-g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~--------~ 104 (562)
.|+++++..+.. |..+..|+ ++|||+|||++||+|+|+|+|.|++++||||||+++... +||+++ +
T Consensus 50 ~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~--~DG~p~~Dg~~~~~v 124 (742)
T 2r7e_A 50 TLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQREK 124 (742)
T ss_dssp CCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSS--SSCCCSSCSCCSSSS
T ss_pred EEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCcc--ccCCccCCCCccccc
Confidence 444444444432 55555554 899999999999999999999999999999999998754 666665 8
Q ss_pred cccccCCCCeEEEEEEeCC---------CCCceEEecCchhh--c-ccceeEEEEcCCCCCCCCCCCCCcceEEEEee--
Q 036540 105 TQCPIKTGNSYTYDFNVTG---------QRGTLWWHAHILWL--R-ATVYGAIVIMPKERTSFPFPQPYQETNIILGE-- 170 (562)
Q Consensus 105 t~~~i~pG~~~~y~~~~~~---------~~Gt~wyH~h~~~~--~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d-- 170 (562)
+||+|+||++++|+|++++ ++||||||||.+.+ . +||+|+|||+++.....+.....+|+++++++
T Consensus 125 tq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~d 204 (742)
T 2r7e_A 125 EDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFD 204 (742)
T ss_dssp SSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCC
T ss_pred ccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeeccc
Confidence 9999999999999999843 46999999999874 4 89999999999865432222224788887754
Q ss_pred ----ccccCHHHHHHhcccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCC-eEEEEEcCcc
Q 036540 171 ----WWNSDVETIVNQGNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALND-ELFFAIAGHN 245 (562)
Q Consensus 171 ----~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~l~gh~ 245 (562)
|+........... .........+.++|||+.+. ..+.+++++|++|||||+|++... .|+||||||.
T Consensus 205 e~~~w~~~~~~~~~~~~-~~~~~~~~~~~~~ING~~~~-------~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~ 276 (742)
T 2r7e_A 205 EGKSWHSETKNSLMQDR-DAASARAWPKMHTVNGYVNR-------SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHT 276 (742)
T ss_dssp CSSSSCCCCCC--------CCSCCCCCCCCEETTBCTB-------CCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCC
T ss_pred CCccccccccccccccC-CCccccccCceEEECCccCC-------CCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCE
Confidence 4443221111000 00111123467899999751 346799999999999999999664 7999999999
Q ss_pred eEEEEeCCCccCceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEeec
Q 036540 246 MTVVEIDAVYTKPFTTQAILIAPGQTTNVLVKADQSPSRYFMAARPF 292 (562)
Q Consensus 246 ~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~ 292 (562)
|+|++ ..+|++.|.|||+++|++++++ ||.|++|||..
T Consensus 277 f~Vvg--------~~~Dtv~v~Pg~~~~v~~~~~~-pG~w~~hCH~~ 314 (742)
T 2r7e_A 277 FLVRN--------HRQASLEISPITFLTAQTLLMD-LGQFLLFCHIS 314 (742)
T ss_dssp CEETT--------EECCSCCCCTTCCCEEEECCCS-CSEECCCCCSS
T ss_pred EEEEe--------EecceEEeCCCcEEEEEEEeCC-CeeEEEEeCCh
Confidence 99974 3578999999999999999998 79999999964
No 20
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=5.8e-52 Score=477.77 Aligned_cols=271 Identities=18% Similarity=0.245 Sum_probs=205.4
Q ss_pred CcccCceEEEEEEEEEEEee--cCCc--------------------------eeeEE-------EEcCc--------CCC
Q 036540 24 FPADAAVKKYQFDVQVKNVS--RLCN--------------------------SKPIV-------TVNGM--------FPG 60 (562)
Q Consensus 24 ~~~~~~~~~~~l~~~~~~~~--~~g~--------------------------~~~~~-------~~Ng~--------~pg 60 (562)
..+.+++|+|.+.|.+.... +.+. .+... +||+. +||
T Consensus 15 ~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 15 TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp -----CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 44668899999999988743 3222 22233 47776 999
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEecCccccC----CCCCCCCCc--ccccccCCCCeEEEEEEeCCC---------C
Q 036540 61 PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYR----NGWADGPAY--ITQCPIKTGNSYTYDFNVTGQ---------R 125 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~----~~~~DGv~~--~t~~~i~pG~~~~y~~~~~~~---------~ 125 (562)
|+||+++||+|+|+|+|.|+++++|||||+++.. .+|+||+++ +|||+|+||++++|+|++.++ +
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~a 174 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNC 174 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSE
T ss_pred CeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCc
Confidence 9999999999999999999999999999999874 467888888 899999999999999999543 4
Q ss_pred CceEEecCchhhc---ccceeEEEEcCCCCCCCCCC-CCCcceEEEEe------eccccCHHHHHH-hcccC-CCC---C
Q 036540 126 GTLWWHAHILWLR---ATVYGAIVIMPKERTSFPFP-QPYQETNIILG------EWWNSDVETIVN-QGNKL-GLP---P 190 (562)
Q Consensus 126 Gt~wyH~h~~~~~---~Gl~G~iiV~~~~~~~~~~~-~~~~e~~l~~~------d~~~~~~~~~~~-~~~~~-g~~---~ 190 (562)
||||||||.+.++ +||+|+|||++++....+.+ ..|+|++|+++ ||+..+....+. ..... ... .
T Consensus 175 GT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~~~p~~~~~~~~~~~ 254 (1065)
T 2j5w_A 175 VTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQ 254 (1065)
T ss_dssp EEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHHH
T ss_pred eEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhhcCcccccccccccc
Confidence 9999999999875 89999999999875433322 35789999999 555543221110 00000 000 0
Q ss_pred CCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCC-CeEEEEEcCcceEEEEeCCCccCceEEeEEEeCCC
Q 036540 191 QTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALN-DELFFAIAGHNMTVVEIDAVYTKPFTTQAILIAPG 269 (562)
Q Consensus 191 ~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pg 269 (562)
..++.++|||+.+. ..+.+++++|++|||||+|+|.. ..|.||||||+|++ +|+.+|++.|+||
T Consensus 255 ~~~~~~~iNG~~~~-------~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~p~~~dtv~I~pG 319 (1065)
T 2j5w_A 255 QSNRMYSVNGYTFG-------SLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDTINLFPA 319 (1065)
T ss_dssp HHTEEEEETTEETT-------CCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------TTEEESEEEECBT
T ss_pred ccCcEEEECCccCC-------CCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------CCeeecEEEECCC
Confidence 01356899999751 24679999999999999999975 69999999999993 6889999999999
Q ss_pred ceEEEEEEeCCCCCeEEEEEeecCCCCCCCCCcceEEEEEecCCCC
Q 036540 270 QTTNVLVKADQSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPN 315 (562)
Q Consensus 270 eR~dv~v~~~~~~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~ 315 (562)
||+||+|++++ ||.|+|+|+...... ....+.+++.+...
T Consensus 320 er~dVlv~~~~-pG~y~i~~h~~~h~~-----~Gm~~~~~V~~~~~ 359 (1065)
T 2j5w_A 320 TLFDAYMVAQN-PGEWMLSCQNLNHLK-----AGLQAFFQVQECNK 359 (1065)
T ss_dssp CEEEEEEECCS-CEEEEEEECSHHHHH-----TTCEEEEEEECSCC
T ss_pred cEEEEEEEeCC-CeeEEEEecCcchhh-----CCCEEEEEEecCCC
Confidence 99999999999 799999999642111 23477788875433
No 21
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=6.1e-52 Score=421.93 Aligned_cols=271 Identities=27% Similarity=0.527 Sum_probs=225.4
Q ss_pred ceEEEEEEEEEEEeecC-CceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccccc
Q 036540 29 AVKKYQFDVQVKNVSRL-CNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQC 107 (562)
Q Consensus 29 ~~~~~~l~~~~~~~~~~-g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~ 107 (562)
.+++|+|++++..++++ |..+.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+++...+|+||+++++||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 47899999999998875 99999999999999999999999999999999999999999999999998899999999999
Q ss_pred ccCCCCeEEEEEEeCCCCCceEEecCchh--hc--ccceeEEEEcCCCCCCCCCCCCCcceEEEEeeccccCHHHHHHhc
Q 036540 108 PIKTGNSYTYDFNVTGQRGTLWWHAHILW--LR--ATVYGAIVIMPKERTSFPFPQPYQETNIILGEWWNSDVETIVNQG 183 (562)
Q Consensus 108 ~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~--~~--~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 183 (562)
+|+||++++|+|++ .++||||||||... +. +||+|+|||+++.....+ ...++|++++++||+...... .
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~~----~ 155 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVADK----Y 155 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTTC----T
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheecccccc----c
Confidence 99999999999998 68999999999876 33 799999999987543211 134789999999998632110 0
Q ss_pred ccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCcc-CceEEe
Q 036540 184 NKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYT-KPFTTQ 262 (562)
Q Consensus 184 ~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~-~p~~~d 262 (562)
...+.....++.++|||+.++. ...+++++|++|||||+|++ ...|+||||||.|+||+.||.++ .|..+|
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~~-------~~~~~v~~G~~vrlrliN~~-~~~h~~hlhGh~f~vi~~DG~~~~~p~~~d 227 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFPL-------TQPLRVKKGDVVKIRFFGAG-GGIHAMHSHGHDMLVTHKDGLPLDSPYYAD 227 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTTS-------SCCEEECTTCEEEEEEEECS-SSCEEEEETTCCEEEEEETTEEEEEEEEES
T ss_pred CCCCCCccccceEEEccccCCC-------cccEEECCCCEEEEEEEeCC-CceEEEEECCcEEEEEEeCCeecCCCcEEE
Confidence 0111111246789999997632 24589999999999999999 56999999999999999999988 489999
Q ss_pred EEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCCC-CCCcceEEEEEecCCC
Q 036540 263 AILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPIP-VDNKTVTAILQYKGIP 314 (562)
Q Consensus 263 ~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~~-~~~~~~~ail~y~~~~ 314 (562)
++.|.||||+||+|++++ ||.|+++||........ .......++++|.+..
T Consensus 228 tv~l~pg~r~~v~~~~~~-pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 228 TVLVSPGERYDVIIEADN-PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEECTTCEEEEEEECCS-CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEECCCCEEEEEEEeCC-CeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 999999999999999998 79999999965422111 1223457999998654
No 22
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=1.6e-49 Score=399.39 Aligned_cols=186 Identities=22% Similarity=0.354 Sum_probs=156.0
Q ss_pred CcccCceEEEEEEEEEEEeecCCce-eeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCC
Q 036540 24 FPADAAVKKYQFDVQVKNVSRLCNS-KPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPA 102 (562)
Q Consensus 24 ~~~~~~~~~~~l~~~~~~~~~~g~~-~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~ 102 (562)
.++.+.+++++|.++. .++|.. +.++..||++|||+|||++||+|+|+|+|.|++++||||||+++... +||++
T Consensus 7 ~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG~~ 81 (313)
T 3tas_A 7 APAGGEVKRIKLYAER---LGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTK 81 (313)
T ss_dssp CCCCCCEEEEEEEEEE---CGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCST
T ss_pred CCCCceEEEEEEEEEE---cCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCcc--CCCCc
Confidence 3466788999988763 345543 55677899999999999999999999999999999999999998765 99998
Q ss_pred cccccccCCCCeEEEEEEeC------------CCCCceEEecCchhh------c-ccceeEEEEcCCCCCCCCCCCCCcc
Q 036540 103 YITQCPIKTGNSYTYDFNVT------------GQRGTLWWHAHILWL------R-ATVYGAIVIMPKERTSFPFPQPYQE 163 (562)
Q Consensus 103 ~~t~~~i~pG~~~~y~~~~~------------~~~Gt~wyH~h~~~~------~-~Gl~G~iiV~~~~~~~~~~~~~~~e 163 (562)
.+||+|+||++++|+|++. .++||||||||..++ . +||+|+|||+++.+. .+|+|
T Consensus 82 -~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e 155 (313)
T 3tas_A 82 -QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRT 155 (313)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEE
T ss_pred -cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----ccccc
Confidence 5899999999999999862 368999999998654 2 799999999988753 35899
Q ss_pred eEEEEeeccccCHHHHHHhcccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcC
Q 036540 164 TNIILGEWWNSDVETIVNQGNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAG 243 (562)
Q Consensus 164 ~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~g 243 (562)
++|+++|| ++||+.++ ..+.+.++.|++|||||+|++ ...|+|||||
T Consensus 156 ~~l~~~d~-------------------------t~Ng~~~~-------~~~~l~v~~Ge~vr~~liN~g-~~~hpfHlHG 202 (313)
T 3tas_A 156 HTIVFNDM-------------------------TINNRPAH-------TGPDFEATVGDRVEFVMITHG-EYYHTFHLHG 202 (313)
T ss_dssp EEEEEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEES-SCCEEEEETT
T ss_pred ceeeccch-------------------------hcccCCcc-------cccccccccCCEEEEEEeccc-ccceeeeecC
Confidence 99999875 57777652 336799999999999999999 6789999999
Q ss_pred cceEEEEeCC
Q 036540 244 HNMTVVEIDA 253 (562)
Q Consensus 244 h~~~via~DG 253 (562)
|.|++++.||
T Consensus 203 h~F~v~~~~~ 212 (313)
T 3tas_A 203 HRWADNRTGM 212 (313)
T ss_dssp CCEESSTTSS
T ss_pred CeeEEEEECC
Confidence 9998755444
No 23
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=2.1e-49 Score=420.21 Aligned_cols=399 Identities=17% Similarity=0.117 Sum_probs=257.8
Q ss_pred ccCceEEEEEEEEEEEeecCCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccc
Q 036540 26 ADAAVKKYQFDVQVKNVSRLCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYIT 105 (562)
Q Consensus 26 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t 105 (562)
+.+.+++++++++......+ ..+.+|||++ ||+|+|++||+|+|+|+|.+...+++||||... .+
T Consensus 24 ~~~~~~~~~~~~~~~~~~f~---g~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~-----------~~ 88 (447)
T 2dv6_A 24 HAPVVFTLRTGIAEGRMVYI---GVGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA-----------RS 88 (447)
T ss_dssp CCCEEEEEEEEEETTEEEEE---EESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE-----------EC
T ss_pred CCCceEEEEEEecccEEEEe---ccceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc-----------cc
Confidence 34455666666554444433 3456999999 899999999999999999998889999998652 24
Q ss_pred ccccCCCCeEEEEEEeCCCCCceEEecCchhhc-ccceeEEEEcCCCCCCCCCC-----CCCcceEEEEeeccccCHHHH
Q 036540 106 QCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLR-ATVYGAIVIMPKERTSFPFP-----QPYQETNIILGEWWNSDVETI 179 (562)
Q Consensus 106 ~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~-~Gl~G~iiV~~~~~~~~~~~-----~~~~e~~l~~~d~~~~~~~~~ 179 (562)
+|+|+||++++|+|++ .++||||||||..+++ +||.|.|+|+++....+... ....+++..+ |+.......+
T Consensus 89 ~~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~ 166 (447)
T 2dv6_A 89 AIVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRI 166 (447)
T ss_dssp CCBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEE
T ss_pred ceecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEE
Confidence 7999999999999998 6799999999998877 79999999998765322100 0000111000 0000000000
Q ss_pred -H-----HhcccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCC-CCeEEEEEcCcceEEEEeC
Q 036540 180 -V-----NQGNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAAL-NDELFFAIAGHNMTVVEID 252 (562)
Q Consensus 180 -~-----~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~-~~~~~~~l~gh~~~via~D 252 (562)
+ ......| ...+.+++||+.- .|++++++|++|||||+|.+. ...+.+|+||. ++.|
T Consensus 167 ~l~~~~~~~~~~~g---~~~~~~~~NG~~p---------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~D 230 (447)
T 2dv6_A 167 DLETVEVKGQLDDN---TTYTYWTFNGKVP---------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPG 230 (447)
T ss_dssp EEEEEEEEEEEETT---EEEEEEEETTBBS---------CCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGG
T ss_pred EEEEEEEEEeccCC---ceeEEEEECCccC---------CCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCC
Confidence 0 0000011 1235789999851 278999999999999999985 35788888884 3578
Q ss_pred CCccCceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchh
Q 036540 253 AVYTKPFTTQAILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNF 332 (562)
Q Consensus 253 G~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~ 332 (562)
|.+ +++.|.||||+++++++++ +|.||+|||...... . ......+.+.+..... +|..+.. .
T Consensus 231 G~~------~~~~i~pG~~~~~~~~~~~-~G~~~yh~h~~~~~~-~-~~~Gl~g~l~v~~~~~--------~P~~d~~-~ 292 (447)
T 2dv6_A 231 GAA------AFTQTDPGEETVVTFKALI-PGIYVYHCATPSVPT-H-ITNGMYGLLLVEPEGG--------LPQVDRE-F 292 (447)
T ss_dssp GGG------GGCCBCTTCEEEEEEECCS-CEEEEEECCSSSHHH-H-HHTTCEEEEEEECTTC--------SCCCSEE-E
T ss_pred CCC------ccEEeCCCCEEEEEEECCC-CeEEEEEeCCCChHH-H-HhCCCEEEEEEeCCCC--------CCCCCee-E
Confidence 873 3346999999999999998 699999998421000 0 0123466777764321 1111110 0
Q ss_pred hccccccccCCCCCCCCCCCCCCcceEEEEEeccCCCCCCCCCCCceeEEeecccccccCccccceeeeccccccccCCC
Q 036540 333 ALNYSSKLRSLNTPQYPANVPLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNITFVMPKIGLLQAHYFNISGVFRTDF 412 (562)
Q Consensus 333 ~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~ 412 (562)
...+.+..... .. .. .....+..... .......|.+||+.+..
T Consensus 293 ~~~~~~~~~~~---~~--~~----~g~~~~~~~~~-------~~~~~~~~~iNG~~~~~--------------------- 335 (447)
T 2dv6_A 293 YVMQGEIYTVK---SF--GT----SGEQEMDYEKL-------INEKPEYFLFNGSVGSL--------------------- 335 (447)
T ss_dssp EEEEEEECBSS---CT--TC----CEECCBBHHHH-------HTTCCSEEEETTSTTCC---------------------
T ss_pred EEEecccccCC---cc--cc----cccccCChHHh-------hccCCCEEEECCcccCC---------------------
Confidence 00000000000 00 00 00000000000 00001124455443210
Q ss_pred CCCCCCcCcCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCC
Q 036540 413 PDRPPVPFNYTGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFN 492 (562)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~ 492 (562)
.....+.++.|++++|+|.|.+ ....||||||||+|+||+.+.+ +
T Consensus 336 ----------------------~~~~~~~v~~g~~vrlrliN~~--~~~~h~~hlhGh~f~vv~~dG~-~---------- 380 (447)
T 2dv6_A 336 ----------------------TRSHPLYASVGETVRIFFGVGG--PNFTSSFHVIGEIFDHVYSLGS-V---------- 380 (447)
T ss_dssp ----------------------CCCCCEEECTTCEEEEEEEEEE--SSCCEEEEEETCCEEEECGGGC-S----------
T ss_pred ----------------------CCCcceEECCCCEEEEEEEeCC--CCceEeEEEcCcEEEEEEcCCc-c----------
Confidence 0013467889999999999965 2568999999999999998522 1
Q ss_pred CCCCC-ccceeeecCCCEEEEEEEecCceeEEEEeehhHhHhccceEEEEEecCCC
Q 036540 493 LVDPP-ERNTVGVPTGGWTAIRFRADNPGVWFMHCHLELHTMWGLKMAFVVENGKS 547 (562)
Q Consensus 493 ~~~p~-~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 547 (562)
+..|. +|||+.|+|++++.|+|++|+||.|+||||+++|++.||+++|.|+....
T Consensus 381 ~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 381 VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 12344 69999999999999999999999999999999999999999999987654
No 24
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=8.9e-49 Score=397.96 Aligned_cols=158 Identities=22% Similarity=0.299 Sum_probs=107.9
Q ss_pred ccchhHHHHHHHHHHHHhhhccCc----------------ccCceEEEEEEEEEEEeecCCceee-EEEEcCcCCCceEE
Q 036540 2 AMQHRRHLVLLLTIFYFLGFLSFP----------------ADAAVKKYQFDVQVKNVSRLCNSKP-IVTVNGMFPGPTIY 64 (562)
Q Consensus 2 ~~~~~r~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~l~~~~~~~~~~g~~~~-~~~~Ng~~pgP~i~ 64 (562)
.+++||+||+++++++++++++.+ +.+++++|+|+++.. ++|.... .+.+||++|||+|+
T Consensus 4 ~~~~rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~ 80 (343)
T 3cg8_A 4 RGFNRRVLLGGAAAATSLSIAPEVAGAAPAAKGITARTAPAGGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIE 80 (343)
T ss_dssp -----------------------------------------CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEE
T ss_pred ccccHHHHHHHHHHHHHhhcCccccCcCcccccCCccccCCCCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEE
Confidence 356899998765544333222110 356779999999875 3443211 12348999999999
Q ss_pred EecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCC------------CCCceEEec
Q 036540 65 IREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTG------------QRGTLWWHA 132 (562)
Q Consensus 65 v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~------------~~Gt~wyH~ 132 (562)
|++||+|+|+|+|.++.+++|||||+.+.. ++||++ ++||+|.||++++|+|++.. ++|+|||||
T Consensus 81 v~~Gd~v~v~~~N~l~~~~sih~HG~~~~~--~~DG~~-~t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~ 157 (343)
T 3cg8_A 81 VNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHD 157 (343)
T ss_dssp EETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-TTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEEC
T ss_pred EECCCEEEEEEEECCCCCeeEEecCcccCC--cCCCcc-cccccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEec
Confidence 999999999999999999999999999874 499999 89999999999999999832 359999999
Q ss_pred Cch------hhc-ccceeEEEEcCCCCCCCCCCCCCcceEEEEee
Q 036540 133 HIL------WLR-ATVYGAIVIMPKERTSFPFPQPYQETNIILGE 170 (562)
Q Consensus 133 h~~------~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d 170 (562)
|.. .+. +||+|+|||+++.... +|+|++++++|
T Consensus 158 h~~~~~~~~~~~~~Gl~G~~iV~~~~~~~-----pd~e~~l~~~d 197 (343)
T 3cg8_A 158 HVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHTIVFND 197 (343)
T ss_dssp SSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEEEEEET
T ss_pred CccccccchhhhhcCCeEEEEEecCCCCC-----CCceEEEEccc
Confidence 973 234 8999999999876431 46777777764
No 25
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=1.7e-48 Score=394.55 Aligned_cols=268 Identities=22% Similarity=0.284 Sum_probs=218.9
Q ss_pred ccCceEEEEEEEEEEEeec-CCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCC--CCceEEecCccccCCCCCCCCC
Q 036540 26 ADAAVKKYQFDVQVKNVSR-LCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQ--YNMSIHWHGLKQYRNGWADGPA 102 (562)
Q Consensus 26 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~--~~~siH~HG~~~~~~~~~DGv~ 102 (562)
..+++++|+|++++..+++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++ .++++||||+.. +||++
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~~ 108 (327)
T 1kbv_A 34 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGGA 108 (327)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGT
T ss_pred CCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCCC
Confidence 4577899999999999887 799999999999999999999999999999999986 589999999862 78876
Q ss_pred cccccccCCCCeEEEEEEeCCCCCceEEecCch---hhc-ccceeEEEEcCCCCCCCCCCCCCcceEEEEeeccccCHHH
Q 036540 103 YITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIL---WLR-ATVYGAIVIMPKERTSFPFPQPYQETNIILGEWWNSDVET 178 (562)
Q Consensus 103 ~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~---~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 178 (562)
..+ .|.||++++|+|++ +++||||||||.+ .+. +||+|+|||+++.. .+..|+|++++++||++.....
T Consensus 109 ~~~--~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~ 181 (327)
T 1kbv_A 109 AAT--FTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKG 181 (327)
T ss_dssp TTT--CBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTT
T ss_pred cce--eecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCccc
Confidence 543 59999999999998 7899999999974 344 89999999998653 2356899999999999865210
Q ss_pred HHHh--cccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCcc
Q 036540 179 IVNQ--GNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYT 256 (562)
Q Consensus 179 ~~~~--~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~ 256 (562)
.... ..........++.++|||+.++... .+.+++++|++|||||+|++....+.|||+||+|+||+.||.++
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~~-----~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~ 256 (327)
T 1kbv_A 182 AQGLQPFDMDKAVAEQPEYVVFNGHVGALTG-----DNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKL 256 (327)
T ss_dssp CCEEECBCHHHHHHTCCSEEEETTSTTTTSG-----GGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC
T ss_pred cccccccChhHhccCCCceEEEcCcccCCCC-----ceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcC
Confidence 0000 0000000123578999999875421 25799999999999999999888999999999999999999999
Q ss_pred CceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCCCCCCcceEEEEEecCCCC
Q 036540 257 KPFTTQAILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPN 315 (562)
Q Consensus 257 ~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~ 315 (562)
+|..++++.|+||||+||+|++++ ||.|+|+|+..... .+....++++|.+...
T Consensus 257 ~p~~~d~l~l~pGer~dv~v~~~~-pG~y~l~~h~~~~~----~~~g~~a~l~~~g~~~ 310 (327)
T 1kbv_A 257 INENVQSTIVPAGGSAIVEFKVDI-PGNYTLVDHSIFRA----FNKGALGQLKVEGAEN 310 (327)
T ss_dssp EECSBSEEEECTTEEEEEEEEECS-CEEEEEEESSTHHH----HHSSCEEEEEEESCCC
T ss_pred CCCceeEEEECCCCEEEEEEEeCC-CeEEEEEecccccc----ccCCcEEEEEECCCCC
Confidence 999999999999999999999998 79999999864321 1234589999987543
No 26
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=7.3e-48 Score=382.96 Aligned_cols=236 Identities=22% Similarity=0.336 Sum_probs=205.7
Q ss_pred ccCceEEEEEEEEEEEeecC-CceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcc
Q 036540 26 ADAAVKKYQFDVQVKNVSRL-CNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYI 104 (562)
Q Consensus 26 ~~~~~~~~~l~~~~~~~~~~-g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~ 104 (562)
....+++|+|++++..++.. |..+.+|+|||++|||+||+++||+|+|+|+|.++.+++|||||++. .++||++++
T Consensus 30 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~ 106 (288)
T 3gdc_A 30 DGRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGI 106 (288)
T ss_dssp TSCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTS
T ss_pred CCCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCc
Confidence 44567899999999988764 88999999999999999999999999999999999999999999983 359999999
Q ss_pred cccccCCCCeEEEEEEeCCCCCceEEecCchh---hc-ccceeEEEEcCCCCCCCCCCCCCcceEEEEeeccccCHHHHH
Q 036540 105 TQCPIKTGNSYTYDFNVTGQRGTLWWHAHILW---LR-ATVYGAIVIMPKERTSFPFPQPYQETNIILGEWWNSDVETIV 180 (562)
Q Consensus 105 t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~---~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~ 180 (562)
+|++|+||++++|+|++ +++||||||||... +. +||+|+|||+++...+ ..++|++|+++||+..+
T Consensus 107 ~~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~~----- 176 (288)
T 3gdc_A 107 GAGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTDG----- 176 (288)
T ss_dssp TTCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCSS-----
T ss_pred cceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecCC-----
Confidence 99999999999999998 89999999999974 33 8999999999886532 34799999999998762
Q ss_pred HhcccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCC-CeEEEEEcCcceEEEEeCCCcc-Cc
Q 036540 181 NQGNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALN-DELFFAIAGHNMTVVEIDAVYT-KP 258 (562)
Q Consensus 181 ~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~-~p 258 (562)
| ..++.++|||+.+++ ..+.++++.|++|||||+|++.. ..|+||||||.|+|++ +|..+ .|
T Consensus 177 ------g---~~~~~~~iNG~~~~~------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~-~g~~~~~~ 240 (288)
T 3gdc_A 177 ------G---DDNEFYSVNGLPFHF------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYP-TGTMLTPS 240 (288)
T ss_dssp ------T---TCCSEEEETTSTTHH------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEE-TTCCSSCS
T ss_pred ------C---CCcceEEECcccccc------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEc-CCCccCCC
Confidence 1 124789999998631 12468999999999999999954 3799999999999998 55554 67
Q ss_pred eEEeEEEeCCCceEEEEEEeCCCCCeEEEEEee
Q 036540 259 FTTQAILIAPGQTTNVLVKADQSPSRYFMAARP 291 (562)
Q Consensus 259 ~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~ 291 (562)
..+|++.|.||||++|++++++ ||.|.+|||.
T Consensus 241 ~~~Dtv~v~pg~~~~v~~~~~~-pG~~~~hCH~ 272 (288)
T 3gdc_A 241 EYTDTISQVQGQRGILELRFPY-PGKFMFHAHK 272 (288)
T ss_dssp EEESEEEEETTCEEEEEECCCS-CEEEEEECSS
T ss_pred ceeeEEEeCCCceEEEEEECCC-CEEEEEEecC
Confidence 9999999999999999999998 8999999985
No 27
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=2.5e-46 Score=430.91 Aligned_cols=400 Identities=15% Similarity=0.139 Sum_probs=263.7
Q ss_pred ceeeEEEEcCcCCC--ceEEEecCCEEEEEEEeCCCCCceEEecCccccC-CCCCCCCCcccccccCCCCeEEEEEEeCC
Q 036540 47 NSKPIVTVNGMFPG--PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYR-NGWADGPAYITQCPIKTGNSYTYDFNVTG 123 (562)
Q Consensus 47 ~~~~~~~~Ng~~pg--P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~-~~~~DGv~~~t~~~i~pG~~~~y~~~~~~ 123 (562)
..+.+.++||++|| |+|++++||+|+|+|.|. .+.+||||+++.. +.++||++.+| |+|.||.+++|+|.+ +
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 45789999999999 889999999999999976 4459999999988 88899999999 999999999999998 7
Q ss_pred CCCceEEecCchhhc-ccceeEEEEcCCCCCCCCCCCCCcceEEEE----eeccccCHHHHHHhcc-cCCCCCCCCCcee
Q 036540 124 QRGTLWWHAHILWLR-ATVYGAIVIMPKERTSFPFPQPYQETNIIL----GEWWNSDVETIVNQGN-KLGLPPQTSDAHT 197 (562)
Q Consensus 124 ~~Gt~wyH~h~~~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~----~d~~~~~~~~~~~~~~-~~g~~~~~~~~~~ 197 (562)
++||||||||...++ +||.|.++|++......+...++.|.++++ .||++........+.. ..+.. +...+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccC---cccee
Confidence 999999999999988 999999999987554444446688999999 8999876654332211 11111 12233
Q ss_pred ECCccCC----------------CCCC----------CCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEe
Q 036540 198 INGKSGP----------------LFPC----------SEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEI 251 (562)
Q Consensus 198 iNG~~~~----------------~~~~----------~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~ 251 (562)
+|+.... .+.. ..-..|+|++++|+++++||+|.. ...+.||.||... ...
T Consensus 768 ~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~-~~~~sih~HGl~~--~~~ 844 (1065)
T 2j5w_A 768 LDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMA-TRPYSIHAHGVQT--ESS 844 (1065)
T ss_dssp TCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECS-SSCBCCEESSCBC--SCS
T ss_pred ecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCC-CCCceEeeccccc--cCC
Confidence 3332100 0000 012348999999999999999996 6788888887433 222
Q ss_pred CCCccCceEEeEEEeCCCceEEEEEEeCCC---------CCeEEEEEeecCCCCCCCCCcceEEEEEecCCCCCCCCCCC
Q 036540 252 DAVYTKPFTTQAILIAPGQTTNVLVKADQS---------PSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPNTVLPTLP 322 (562)
Q Consensus 252 DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~---------~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p 322 (562)
| ...+.||++++..+.+.+. +|.||+|++... .. .. .....+.|.+.......
T Consensus 845 -~---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~-~~-q~-~~GL~G~liV~~~~~l~----- 906 (1065)
T 2j5w_A 845 -T---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQ-VK-DL-YSGLIGPLIVCRRPYLK----- 906 (1065)
T ss_dssp -C---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTH-HH-HH-HTTCEEEEEEECCC--------
T ss_pred -C---------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCCh-HH-hh-hccccceeEecCccccc-----
Confidence 2 1256799998888887652 259999987321 00 00 01234444443211100
Q ss_pred CCCCCCCchhhccccccccCCCCCCCCCCCCCCcceEEEEEeccCCCCCCCCCCCceeEEeeccccccc-C-ccccceee
Q 036540 323 SLPAPSDTNFALNYSSKLRSLNTPQYPANVPLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNITFVM-P-KIGLLQAH 400 (562)
Q Consensus 323 ~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~-p-~~~~l~~~ 400 (562)
. . ..+...|..+.+.. ++. ++. .....|+.+|.. | .++++...
T Consensus 907 --------------------~--~----~~~~d~D~~l~~~~-~d~-------~~~-~y~~~n~~~~~~~P~~v~~~~~~ 951 (1065)
T 2j5w_A 907 --------------------V--F----NPRRKLEFALLFLV-FDE-------NES-WYLDDNIKTYSDHPEKVNKDDEE 951 (1065)
T ss_dssp ----------------------------CCCCEEEEEEEEEE-EEG-------GGS-TTHHHHHHHHCSCGGGCCTTCHH
T ss_pred --------------------c--c----CCCcceEEEEEEEe-ecC-------Ccc-eeeccCcccccCCccccCcchhh
Confidence 0 0 01111121121111 100 000 000112223321 1 11211100
Q ss_pred eccccccccCCCCCCCCCcCcCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCC
Q 036540 401 YFNISGVFRTDFPDRPPVPFNYTGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIG 480 (562)
Q Consensus 401 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g 480 (562)
+.. ....+..+|. ...+...+.++.|++|+|+|.|.+. ..+.||||||||.|+|++++
T Consensus 952 ~~~------------~~~~~~iNG~-------~~~~~~~~~v~~G~~vr~~l~N~g~-~~~~HpfHlHG~~F~vv~~~-- 1009 (1065)
T 2j5w_A 952 FIE------------SNKMHAINGR-------MFGNLQGLTMHVGDEVNWYLMGMGN-EIDLHTVHFHGHSFQYKHRG-- 1009 (1065)
T ss_dssp HHH------------HTEEEEETTB-------CTTCCCCCEEETTCEEEEEEEECCS-TTCCEEEEESSCCEEETTTT--
T ss_pred hhc------------cCceEEECCc-------cCCCCccEEeCCCCEEEEEEEeCCC-CCcceeEEEcccEEEEEecC--
Confidence 000 0000111111 0112345788999999999999752 25689999999999999652
Q ss_pred CCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEecCceeEEEEeehhHhHhccceEEEEEecCCC
Q 036540 481 NFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRADNPGVWFMHCHLELHTMWGLKMAFVVENGKS 547 (562)
Q Consensus 481 ~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 547 (562)
|.|||||.|+|+++++|+|++||||.|+||||+++|++.|||+.|.|.+.+.
T Consensus 1010 ---------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~~ 1061 (1065)
T 2j5w_A 1010 ---------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNED 1061 (1065)
T ss_dssp ---------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC-
T ss_pred ---------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCcc
Confidence 6799999999999999999999999999999999999999999999987543
No 28
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=2.6e-45 Score=362.36 Aligned_cols=223 Identities=19% Similarity=0.305 Sum_probs=191.2
Q ss_pred cccCceEEEEEEEEEEEeecCCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcc
Q 036540 25 PADAAVKKYQFDVQVKNVSRLCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYI 104 (562)
Q Consensus 25 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~ 104 (562)
++++.+|+|+|++++.. .+......+++||++|||+||+++||+|+|+|+|.++++++|||||+++... +||++ +
T Consensus 2 ~~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~~--~DG~~-~ 76 (276)
T 3kw8_A 2 PAGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEIS--SDGTA-M 76 (276)
T ss_dssp --CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT-T
T ss_pred CCcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCCc--cCCCc-C
Confidence 35788999999999853 2334456678999999999999999999999999999999999999999764 99999 8
Q ss_pred cccccCCCCeEEEEEEeCC------------CCCceEEecCchh------hc-ccceeEEEEcCCCCCCCCCCCCCcceE
Q 036540 105 TQCPIKTGNSYTYDFNVTG------------QRGTLWWHAHILW------LR-ATVYGAIVIMPKERTSFPFPQPYQETN 165 (562)
Q Consensus 105 t~~~i~pG~~~~y~~~~~~------------~~Gt~wyH~h~~~------~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~ 165 (562)
+||+|+||++++|+|++.+ ++||||||||.++ +. +||+|+|||+++.... +|+|++
T Consensus 77 t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~~-----~drE~~ 151 (276)
T 3kw8_A 77 NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHT 151 (276)
T ss_dssp TTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEE
T ss_pred CcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCcc-----cccceE
Confidence 9999999999999999943 3799999999964 34 8999999999987532 388999
Q ss_pred EEEeeccccCHHHHHHhcccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcc
Q 036540 166 IILGEWWNSDVETIVNQGNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHN 245 (562)
Q Consensus 166 l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~ 245 (562)
+++++ ++|||+.++ ..+.++++.|++|||||+|.+. ..|+||||||.
T Consensus 152 l~l~~-------------------------~~iNG~~~~-------~~p~i~v~~G~~vri~l~N~~~-~~Hp~HlHG~~ 198 (276)
T 3kw8_A 152 IVFND-------------------------MTINNRKPH-------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHR 198 (276)
T ss_dssp EEEET-------------------------TEETTCCTT-------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCC
T ss_pred EEecc-------------------------cccceeccc-------CCCCEEEecCCEEEEEEecCCC-cceeEEEccce
Confidence 98865 389999762 4578999999999999999994 79999999999
Q ss_pred eEEEEeCCCcc----CceEEeEEEeCCCceEEEEEEeCC--CCCeEEEEEee
Q 036540 246 MTVVEIDAVYT----KPFTTQAILIAPGQTTNVLVKADQ--SPSRYFMAARP 291 (562)
Q Consensus 246 ~~via~DG~~~----~p~~~d~v~l~pgeR~dv~v~~~~--~~G~~~i~~~~ 291 (562)
|.+++ ||... .+..+|++.|.|||++++++++++ .||.|++|||.
T Consensus 199 f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~ 249 (276)
T 3kw8_A 199 WADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHV 249 (276)
T ss_dssp EESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECS
T ss_pred eEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCC
Confidence 99875 66543 346899999999999999999984 48999999995
No 29
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=6.9e-45 Score=362.69 Aligned_cols=223 Identities=17% Similarity=0.289 Sum_probs=188.2
Q ss_pred ccCceEEEEEEEEEEEeecCCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccc
Q 036540 26 ADAAVKKYQFDVQVKNVSRLCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYIT 105 (562)
Q Consensus 26 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t 105 (562)
+.+.+++++|.+++..- ....+.++.+||++|||+|||++||+|+|+|+|.|++++||||||+++.+. +||++ ++
T Consensus 25 ~~~~~~~~~~~a~~~~~--~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~--~DG~~-~~ 99 (299)
T 3t9w_A 25 AQGTTRRITMYAEKISD--ELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVN--SDGTL-MN 99 (299)
T ss_dssp --CCEEEEEEEEEEEET--TEEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT-TT
T ss_pred cCCCEEEEEEEEEecCC--CceeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCCc--cCCCc-cc
Confidence 67888999999887531 123345566799999999999999999999999999999999999998755 99997 89
Q ss_pred ccccCCCCeEEEEEEeC------------CCCCceEEecCchhhc-------ccceeEEEEcCCCCCCCCCCCCCcceEE
Q 036540 106 QCPIKTGNSYTYDFNVT------------GQRGTLWWHAHILWLR-------ATVYGAIVIMPKERTSFPFPQPYQETNI 166 (562)
Q Consensus 106 ~~~i~pG~~~~y~~~~~------------~~~Gt~wyH~h~~~~~-------~Gl~G~iiV~~~~~~~~~~~~~~~e~~l 166 (562)
||+|+||++++|+|+++ .++||||||||..++. +||+|+|||+++.+. .+|+|+++
T Consensus 100 ~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e~~l 174 (299)
T 3t9w_A 100 GSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQFTV 174 (299)
T ss_dssp TCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEE
T ss_pred cCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Ccccccee
Confidence 99999999999999873 2689999999986532 699999999988753 35889999
Q ss_pred EEeeccccCHHHHHHhcccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcce
Q 036540 167 ILGEWWNSDVETIVNQGNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNM 246 (562)
Q Consensus 167 ~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~ 246 (562)
++++| .+||+..+ ..+.++++.||+|||||+|++ ...|+||||||.|
T Consensus 175 ~~~~~-------------------------~~Ng~~~~-------~~p~l~v~~Ge~Vr~~liN~~-~~~HpfHlHGh~F 221 (299)
T 3t9w_A 175 VFNDM-------------------------MINNRAHH-------DAPTFEANLGERVEWIAIGHG-SNFHTFHLHGHRW 221 (299)
T ss_dssp EEETT-------------------------EETTCCTT-------CCCEEEEETTCEEEEEEEEES-SCCCEEEETTCCE
T ss_pred eeeee-------------------------eecCcccc-------ccccceecCCCEEEEEEEecc-ccceeeeEecceE
Confidence 88764 57887652 357899999999999999999 5779999999999
Q ss_pred EEEEeCCCcc---CceEEeEEEeCCCceEEEEEEeCC--CCCeEEEEEee
Q 036540 247 TVVEIDAVYT---KPFTTQAILIAPGQTTNVLVKADQ--SPSRYFMAARP 291 (562)
Q Consensus 247 ~via~DG~~~---~p~~~d~v~l~pgeR~dv~v~~~~--~~G~~~i~~~~ 291 (562)
+++..++... .+..+|++.|.||||++++|.+.+ .||.|.+|||.
T Consensus 222 ~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi 271 (299)
T 3t9w_A 222 LDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHV 271 (299)
T ss_dssp ESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECS
T ss_pred EEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCC
Confidence 9999888765 345789999999999999997664 37999999995
No 30
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=4.1e-44 Score=378.75 Aligned_cols=268 Identities=21% Similarity=0.260 Sum_probs=219.1
Q ss_pred ccCceEEEEEEEEEEEeec-CCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCC--CCceEEecCccccCCCCCCCCC
Q 036540 26 ADAAVKKYQFDVQVKNVSR-LCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQ--YNMSIHWHGLKQYRNGWADGPA 102 (562)
Q Consensus 26 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~--~~~siH~HG~~~~~~~~~DGv~ 102 (562)
+.+.+++|+|+++...++. +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.. +||++
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~ 98 (442)
T 2zoo_A 24 DHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGA 98 (442)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCC
Confidence 5678899999999999984 899999999999999999999999999999999985 599999999873 68876
Q ss_pred cccccccCCCCeEEEEEEeCCCCCceEEecCch---hhc-ccceeEEEEcCCCCCCCCCCCCCcceEEEEeeccccCHHH
Q 036540 103 YITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIL---WLR-ATVYGAIVIMPKERTSFPFPQPYQETNIILGEWWNSDVET 178 (562)
Q Consensus 103 ~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~---~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 178 (562)
..+ +|.||++++|+|++ +++||||||||.+ .+. +||+|+|||+++... +.+|+|++++++||++.....
T Consensus 99 ~~~--~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~ 171 (442)
T 2zoo_A 99 ESS--FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFG 171 (442)
T ss_dssp GGC--CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTT
T ss_pred ccE--EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCccc
Confidence 543 69999999999998 7899999999753 344 899999999976532 246899999999998765310
Q ss_pred HH-Hh-cccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCcc
Q 036540 179 IV-NQ-GNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYT 256 (562)
Q Consensus 179 ~~-~~-~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~ 256 (562)
.. .. ..........++.++|||+.++.. ..+.+++++|++|||||+|+|....+.|||+||.|+||+.||.++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~liNG~~~~~~-----~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~ 246 (442)
T 2zoo_A 172 EAGLQPFDMAKAIDEDADYVVFNGSVGSTT-----DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSL 246 (442)
T ss_dssp CCEEECBCHHHHHTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC
T ss_pred ccccccCChhHhccCCCCEEEECCCcCCCC-----CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccC
Confidence 00 00 000000113468999999976321 125799999999999999999888999999999999999999999
Q ss_pred CceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCCCCCCcceEEEEEecCCCC
Q 036540 257 KPFTTQAILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPN 315 (562)
Q Consensus 257 ~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~ 315 (562)
+|..++++.|.||||+||+|++++ +|.|+++|+.+... .+....++++|.+...
T Consensus 247 ~p~~~~~~~l~pg~r~~v~v~~~~-~G~y~~~~~~~~~~----~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 247 KNHNVQTTLIPAGGAAIVEFKVEV-PGTFILVDHSIFRA----FNKGALAMLKVEGPDD 300 (442)
T ss_dssp EECSBSEEEECTTEEEEEEEECCS-CEEEEEEESSTHHH----HTTSCEEEEEEESCCC
T ss_pred CCccceEEEECCCeeEEEEEEcCC-CCeEEEEecccccc----cccCceEEEEecCCCC
Confidence 999999999999999999999998 79999999864321 1234589999987543
No 31
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=3.8e-43 Score=357.17 Aligned_cols=271 Identities=19% Similarity=0.205 Sum_probs=207.3
Q ss_pred ccCceEEEEEEEEEEEeec-CCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcc
Q 036540 26 ADAAVKKYQFDVQVKNVSR-LCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYI 104 (562)
Q Consensus 26 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~ 104 (562)
+.+++++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++......||.+.+
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~~ 104 (333)
T 1mzy_A 28 SGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGGL 104 (333)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCce
Confidence 5678999999999999877 5999999999999999999999999999999999 57899999998764335555556
Q ss_pred cccccCCCCeEEEEEEeCCCCCceEEecCchh-----hc-ccceeEEEEcCCCCCCCC--C-CCCCcceEEEEeeccccC
Q 036540 105 TQCPIKTGNSYTYDFNVTGQRGTLWWHAHILW-----LR-ATVYGAIVIMPKERTSFP--F-PQPYQETNIILGEWWNSD 175 (562)
Q Consensus 105 t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~-----~~-~Gl~G~iiV~~~~~~~~~--~-~~~~~e~~l~~~d~~~~~ 175 (562)
+ .|+||++++|+|++ +++||||||||.++ +. +||+|+|||+++...+.+ . ..+|+|++++++||++..
T Consensus 105 ~--~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~ 181 (333)
T 1mzy_A 105 T--LINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIPK 181 (333)
T ss_dssp C--CBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCB
T ss_pred e--EeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccCc
Confidence 5 49999999999998 78999999999974 55 899999999976532111 1 145889999999998731
Q ss_pred --HHH---------HHHhcccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCc
Q 036540 176 --VET---------IVNQGNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGH 244 (562)
Q Consensus 176 --~~~---------~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh 244 (562)
... .+...... .....++.++|||+.+++. ..+.+++++||+||||++|++....+ ..+++|
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ING~~~~~~-----~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i~~h 254 (333)
T 1mzy_A 182 DEDGTYMRFSDPSEGYEDMVAV-MDTLIPSHIVFNGAVGALT-----GEGALKAKVGDNVLFVHSQPNRDSRP-HLIGGH 254 (333)
T ss_dssp CTTSCBCCCSSHHHHHHHHHHH-HTTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSSCBCE-EEETCC
T ss_pred cccccccccccccccccchhHH-hhccCCcEEEECCcccccC-----CCcceEecCCCEEEEEECCCCCcccc-EEECCC
Confidence 110 00000000 0113468999999986321 23679999999998887776632222 348899
Q ss_pred ceEEEEeCCCccC-ce-EEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCCCCCCcceEEEEEecCCCC
Q 036540 245 NMTVVEIDAVYTK-PF-TTQAILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPN 315 (562)
Q Consensus 245 ~~~via~DG~~~~-p~-~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~ 315 (562)
.++|++ ||.+++ |. .+|++.|.||||+||+|++++ ||.|+++||..... ......++++|.+...
T Consensus 255 ~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~-pG~y~~~ch~~~h~----~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 255 GDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PGVYAYVNHNLIEA----VHKGATAHVLVEGEWD 321 (333)
T ss_dssp EEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH----HTTCCEEEEEEESCCC
T ss_pred CeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC-CEEEEEecChhhhH----hhCCCEEEEEEcCCCC
Confidence 999999 999985 44 589999999999999999998 79999999964321 0234578999986443
No 32
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=1.6e-42 Score=353.20 Aligned_cols=270 Identities=21% Similarity=0.281 Sum_probs=201.5
Q ss_pred ccCceEEEEEEEEEEEee--cCCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCc
Q 036540 26 ADAAVKKYQFDVQVKNVS--RLCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAY 103 (562)
Q Consensus 26 ~~~~~~~~~l~~~~~~~~--~~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~ 103 (562)
+.+++++|+|++++..++ +||..+.+|+|||++|||+|+|++||+|+|+|+|.+. ++||||+++....+.||.+.
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~ 104 (336)
T 1oe1_A 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAK 104 (336)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcc
Confidence 356789999999999876 5599999999999999999999999999999999974 34555555544444666666
Q ss_pred ccccccCCCCeEEEEEEeCCCCCceEEecCchh----hc-ccceeEEEEcCCCCCCCCC---CCCCcceEEEEeeccccC
Q 036540 104 ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILW----LR-ATVYGAIVIMPKERTSFPF---PQPYQETNIILGEWWNSD 175 (562)
Q Consensus 104 ~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~----~~-~Gl~G~iiV~~~~~~~~~~---~~~~~e~~l~~~d~~~~~ 175 (562)
+++ |.||++++|+|++ +++||||||||.++ +. +||+|+|||+++.....+. ..+|+|++|+++||++..
T Consensus 105 ~~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~ 181 (336)
T 1oe1_A 105 LTN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPK 181 (336)
T ss_dssp GCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCB
T ss_pred eEE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeecc
Confidence 654 9999999999998 78999999999864 34 8999999999865422111 145889999999998741
Q ss_pred H--HHHHHhcccCC---------CCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEE-EEEcC
Q 036540 176 V--ETIVNQGNKLG---------LPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELF-FAIAG 243 (562)
Q Consensus 176 ~--~~~~~~~~~~g---------~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~-~~l~g 243 (562)
. ..+ ..+...+ .....++.++|||+.+++. ..+.+++++|++||| +|++..+.+. +.+++
T Consensus 182 ~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~-----~~~~l~v~~GervRl--in~~~~~~~~~~~i~g 253 (336)
T 1oe1_A 182 GPDGKY-KDYATLAESYGDTVQVMRTLTPSHIVFNGKVGALT-----GANALTAKVGETVLL--IHSQANRDTRPHLIGG 253 (336)
T ss_dssp CTTSSB-CCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEE--EEEESSSCBCEEETTC
T ss_pred ccCCce-eecccccccccchhhHhhcCCCCEEEECCeeccCC-----CCcceEcCCCCEEEE--EecCCCCccceEEECC
Confidence 1 100 0000000 0013458999999986431 137799999997776 5555555544 44699
Q ss_pred cceEEEEeCCCccCce--EEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCCCCCCcceEEEEEecCCCC
Q 036540 244 HNMTVVEIDAVYTKPF--TTQAILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPN 315 (562)
Q Consensus 244 h~~~via~DG~~~~p~--~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~ 315 (562)
|.|+|++ ||.+++|. .++++.|.||||+||+|++++ ||.|+++||..... ......++++|.+...
T Consensus 254 h~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG~y~~~~h~~~~~----~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 254 HGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEA----FELGAAGHIKVEGKWN 321 (336)
T ss_dssp CEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH----HTTSCEEEEEEESCCC
T ss_pred cCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-CceEEEEechhhcc----ccCCCeEEEEECCCCC
Confidence 9999997 99998664 478999999999999999998 79999999964211 0234578999986544
No 33
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=9.3e-43 Score=355.54 Aligned_cols=270 Identities=19% Similarity=0.253 Sum_probs=204.0
Q ss_pred ccCceEEEEEEEEEEEeec--CCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCc
Q 036540 26 ADAAVKKYQFDVQVKNVSR--LCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAY 103 (562)
Q Consensus 26 ~~~~~~~~~l~~~~~~~~~--~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~ 103 (562)
+.+++++|+|++++..++. ||..+.+|+|||++|||+|+|++||+|+|+|+|.+ +++||||+++......||...
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~~ 110 (340)
T 2bw4_A 34 TGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGGA 110 (340)
T ss_dssp SSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCcc
Confidence 4567899999999998874 49999999999999999999999999999999998 678999998765433444444
Q ss_pred ccccccCCCCeEEEEEEeCCCCCceEEecCchh----hc-ccceeEEEEcCCCCCC----CCCCCCCcceEEEEeecccc
Q 036540 104 ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILW----LR-ATVYGAIVIMPKERTS----FPFPQPYQETNIILGEWWNS 174 (562)
Q Consensus 104 ~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~----~~-~Gl~G~iiV~~~~~~~----~~~~~~~~e~~l~~~d~~~~ 174 (562)
++ .|.||++++|+|++ .++||||||||.++ +. +||+|+|||++++... .+. .+++|++++++||++.
T Consensus 111 ~~--~i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~ 186 (340)
T 2bw4_A 111 LT--QVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYVP 186 (340)
T ss_dssp GC--CBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECCC
T ss_pred ce--EeCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeeec
Confidence 54 49999999999998 68999999999874 44 8999999999865311 111 3588999999999873
Q ss_pred --CHHH---------HHHhcccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcC
Q 036540 175 --DVET---------IVNQGNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAG 243 (562)
Q Consensus 175 --~~~~---------~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~g 243 (562)
.... ........ .....++.++|||+.++. ...+.+++++|++|||++.|.+ ...+.+++++
T Consensus 187 ~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~-----~~~~~l~v~~G~r~Rl~n~~~~-~~~~~~~i~g 259 (340)
T 2bw4_A 187 KDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGAL-----TGDHALTAAVGERVLVVHSQAN-RDTRPHLIGG 259 (340)
T ss_dssp BCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTT-----SGGGCEEEETTCEEEEEEEESS-SCBCEEEETC
T ss_pred cccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCc-----cCCCceEcCCCCEEEEEECCCC-CccceEEecC
Confidence 1110 00000000 001245889999998632 1247899999998887777665 3344456899
Q ss_pred cceEEEEeCCCccC-ce-EEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCCCCCCcceEEEEEecCCCC
Q 036540 244 HNMTVVEIDAVYTK-PF-TTQAILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPN 315 (562)
Q Consensus 244 h~~~via~DG~~~~-p~-~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~ 315 (562)
|.|+|++ ||.++. |. .+|++.|.||||+||+|++++ ||.|+++||...+. ......++++|.+...
T Consensus 260 h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG~y~~~~h~~~~h----~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 260 HGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEA----FELGAAGHFKVTGEWN 327 (340)
T ss_dssp CEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHH----HTTSCEEEEEEESCCC
T ss_pred cceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-CeeeEEEcCchHHH----HhCCCEEEEEECCCCc
Confidence 9999997 999884 43 589999999999999999998 79999999964211 0123468889886443
No 34
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=5.3e-39 Score=340.45 Aligned_cols=259 Identities=20% Similarity=0.288 Sum_probs=207.8
Q ss_pred CceEEEEEEEEEEEeec-CCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCC--CCceEEecCccccCCCCCCCCCcc
Q 036540 28 AAVKKYQFDVQVKNVSR-LCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQ--YNMSIHWHGLKQYRNGWADGPAYI 104 (562)
Q Consensus 28 ~~~~~~~l~~~~~~~~~-~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~--~~~siH~HG~~~~~~~~~DGv~~~ 104 (562)
+.++.|+|++....... +|....+|+|||++|||+|++++||+++|||+|.+. ..++|||||+.. +||++..
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCcc
Confidence 45567888877766655 588889999999999999999999999999999985 679999999852 7998755
Q ss_pred cccccCCCCeEEEEEEeCCCCCceEEecCch---hhc-ccceeEEEEcCCCCCCCCCCCCCcceEEEEeeccccCHHHH-
Q 036540 105 TQCPIKTGNSYTYDFNVTGQRGTLWWHAHIL---WLR-ATVYGAIVIMPKERTSFPFPQPYQETNIILGEWWNSDVETI- 179 (562)
Q Consensus 105 t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~---~~~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~- 179 (562)
+ .|.||++++|.|++ +++|+||||||.. .+. .||+|+|+|+++.. .+..++|++++++||++......
T Consensus 236 ~--~i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~----~P~~d~~~~~~~~~~~~~~~~~~~ 308 (447)
T 2dv6_A 236 T--QTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG----LPQVDREFYVMQGEIYTVKSFGTS 308 (447)
T ss_dssp C--CBCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC----SCCCSEEEEEEEEEECBSSCTTCC
T ss_pred E--EeCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC----CCCCCeeEEEEecccccCCccccc
Confidence 4 49999999999998 6899999999974 333 89999999997653 23468899999999986532100
Q ss_pred ------HHhcccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCC
Q 036540 180 ------VNQGNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDA 253 (562)
Q Consensus 180 ------~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG 253 (562)
.... .+ ..++.++|||+.++... .+.+++++|++|||||+|++....|+||||||.|+||+.||
T Consensus 309 g~~~~~~~~~--~~---~~~~~~~iNG~~~~~~~-----~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG 378 (447)
T 2dv6_A 309 GEQEMDYEKL--IN---EKPEYFLFNGSVGSLTR-----SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLG 378 (447)
T ss_dssp EECCBBHHHH--HT---TCCSEEEETTSTTCCCC-----CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGG
T ss_pred ccccCChHHh--hc---cCCCEEEECCcccCCCC-----CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCC
Confidence 0000 01 13478999999875321 24699999999999999999888999999999999999999
Q ss_pred CccCc-e-EEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecCCCCCCCCCcceEEEEEecCCC
Q 036540 254 VYTKP-F-TTQAILIAPGQTTNVLVKADQSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIP 314 (562)
Q Consensus 254 ~~~~p-~-~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 314 (562)
.++.| . .+|++.|.||||++|+|++++ ||.|+||||..... .....++++|.+..
T Consensus 379 ~~~~~p~~~~dtv~l~pg~r~~i~~~~~~-pG~~~~hch~~~h~-----~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 379 SVVSPPLIGVQTVSVPPGGATIVDFKIDR-AGRYILVDHALSRL-----EHGLVGFLNVDGPK 435 (447)
T ss_dssp CSSSCCEEEESEEEECTTEEEEEEEECCS-CEEEEEEESSGGGG-----GGTCCEEEEECSCS
T ss_pred cccCCCcccccEEEECCCcEEEEEEECCC-CEEEEEEecCcCcc-----ccCCEEEEEEeCCC
Confidence 99854 4 589999999999999999998 79999999964322 12347889997654
No 35
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=2.2e-40 Score=365.57 Aligned_cols=220 Identities=17% Similarity=0.231 Sum_probs=166.7
Q ss_pred cCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCccc--------ccccCCCCeEEEEEEeCCC--
Q 036540 55 NGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYIT--------QCPIKTGNSYTYDFNVTGQ-- 124 (562)
Q Consensus 55 Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t--------~~~i~pG~~~~y~~~~~~~-- 124 (562)
++++|||+|||++||+|+|+|+|.++++++|||||+++... +||+++++ ||+|+||++++|+|+++++
T Consensus 63 ~~~~pGP~I~~~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~g 140 (647)
T 1sdd_B 63 HLGILGPVIRAEVDDVIQVRFKNLASRPYSLHAHGLSYEKS--SEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSG 140 (647)
T ss_dssp GGTTSCCCEEEETTCEEEEEECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTS
T ss_pred ccCCcCceEEEeCCCEEEEEEEECCCCceEEecCcceeCCC--CCCccccCCCCcccccCcccCCCCeEEEEEECCcccC
Confidence 34789999999999999999999999999999999999754 99999886 9999999999999999544
Q ss_pred ---CC----ceEEecCchh--hc-ccceeEEEEcCCCCCCC--CCCCCCcceEEEEe------eccccCHHHHHHhcccC
Q 036540 125 ---RG----TLWWHAHILW--LR-ATVYGAIVIMPKERTSF--PFPQPYQETNIILG------EWWNSDVETIVNQGNKL 186 (562)
Q Consensus 125 ---~G----t~wyH~h~~~--~~-~Gl~G~iiV~~~~~~~~--~~~~~~~e~~l~~~------d~~~~~~~~~~~~~~~~ 186 (562)
+| |||||||.+. +. +||+|+|||+++..... ..+..++|++|+++ ||+++............
T Consensus 141 p~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~ 220 (647)
T 1sdd_B 141 PENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASS 220 (647)
T ss_dssp CCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC------------
T ss_pred CCCCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCCc
Confidence 57 9999999964 33 89999999999865321 11234689999999 67765432210000000
Q ss_pred CCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCC-eEEEEEcCcceEEEEeCCCccCceEEeEEE
Q 036540 187 GLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALND-ELFFAIAGHNMTVVEIDAVYTKPFTTQAIL 265 (562)
Q Consensus 187 g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~l~gh~~~via~DG~~~~p~~~d~v~ 265 (562)
.....++.++|||+.++ .|.+++++|++|||||+|++... .|.||+|||.|++++.|| ..+|++.
T Consensus 221 -~~~~~~~~~~iNG~~~~--------~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~ 286 (647)
T 1sdd_B 221 -EVKNSHEFHAINGMIYN--------LPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWP 286 (647)
T ss_dssp ----CCCEEEEETTBSSC--------CCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEE
T ss_pred -chhhcCceeccCCEecC--------CCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEE
Confidence 11234588999999752 27799999999999999999764 899999999999998875 5889999
Q ss_pred eCCCceEEEEEEeCCCCCeEEEEEee
Q 036540 266 IAPGQTTNVLVKADQSPSRYFMAARP 291 (562)
Q Consensus 266 l~pgeR~dv~v~~~~~~G~~~i~~~~ 291 (562)
|.||||+||+|++++ ||.|++|||.
T Consensus 287 l~pg~r~~v~~~~~~-pG~w~~hch~ 311 (647)
T 1sdd_B 287 LLPGSFKTLEMKASK-PGWWLLDTEV 311 (647)
T ss_dssp ECTTEEEEEEEECCS-SEEEEEECCC
T ss_pred ECCCeEEEEEEEecc-ceEeecccCc
Confidence 999999999999998 7999999996
No 36
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=2.8e-41 Score=338.48 Aligned_cols=214 Identities=17% Similarity=0.234 Sum_probs=158.8
Q ss_pred eeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcc------c--ccccCCCCeEEEEEE
Q 036540 49 KPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYI------T--QCPIKTGNSYTYDFN 120 (562)
Q Consensus 49 ~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~------t--~~~i~pG~~~~y~~~ 120 (562)
+...++| ++|||+|+|++||+|+|+|+|.++++++|||||+++... +||++.. + ||+|+||++++|+|+
T Consensus 49 ~~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~ 125 (306)
T 1sdd_A 49 KPQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF--SEGASYSDHTLPMEKMDDAVAPGQEYTYEWI 125 (306)
T ss_dssp CCCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTT--TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEE
T ss_pred ccccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccc--cCCCccCCCCcccccCCCccCCCCeEEEEEE
Confidence 3445688 589999999999999999999999999999999996654 6666553 3 699999999999999
Q ss_pred eCCC---------CCceEEecCchh--hc-ccceeEEEEcCCCCCCC-CC-CCCCcceEEEEeeccccCHHHHHHhcccC
Q 036540 121 VTGQ---------RGTLWWHAHILW--LR-ATVYGAIVIMPKERTSF-PF-PQPYQETNIILGEWWNSDVETIVNQGNKL 186 (562)
Q Consensus 121 ~~~~---------~Gt~wyH~h~~~--~~-~Gl~G~iiV~~~~~~~~-~~-~~~~~e~~l~~~d~~~~~~~~~~~~~~~~ 186 (562)
++++ +||||||||... +. +||+|+|||+++..... +. ...++|++++++||.... ..
T Consensus 126 ~~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~---------~~ 196 (306)
T 1sdd_A 126 ISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESK---------SW 196 (306)
T ss_dssp CCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTS---------SS
T ss_pred eCCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEeccccc---------cc
Confidence 9544 379999999876 43 89999999998753211 11 135789999999974211 00
Q ss_pred CCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCC-CeEEEEEcCcceEEEEeCCCccCceEEeEEE
Q 036540 187 GLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALN-DELFFAIAGHNMTVVEIDAVYTKPFTTQAIL 265 (562)
Q Consensus 187 g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~v~ 265 (562)
. ...++.++|||+.+. ..|.+++++|++|||||+|++.. ..|+||||||.|.+ || ..+|++.
T Consensus 197 ~--~~~~~~~~ING~~~~-------~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~ 259 (306)
T 1sdd_A 197 N--QTSSLMYTVNGYVNG-------TMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAIT 259 (306)
T ss_dssp S--CCCCEEECSSSCCSS-------CCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCC
T ss_pred c--cCCCcceeeCCEecC-------CCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEE
Confidence 0 122477999999752 23679999999999999999976 57899999999986 77 4689999
Q ss_pred eCCCceEEEEEEeCCCCCeEEEEEeec
Q 036540 266 IAPGQTTNVLVKADQSPSRYFMAARPF 292 (562)
Q Consensus 266 l~pgeR~dv~v~~~~~~G~~~i~~~~~ 292 (562)
|.||||+||+|++++ ||.|+++||..
T Consensus 260 l~pger~~v~~~~~~-pG~~~~hch~~ 285 (306)
T 1sdd_A 260 LVSATSTTANMTVSP-EGRWTIASLIP 285 (306)
T ss_dssp EETTCCBC---------CCCCCBCCST
T ss_pred ECCCcEEEEEEEcCC-CeEEEEEeCCh
Confidence 999999999999998 79999999953
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=3.5e-40 Score=365.55 Aligned_cols=251 Identities=12% Similarity=0.097 Sum_probs=194.7
Q ss_pred ccCceEEEEEEEEEEE--eecCCc---------------eeeE--EEE-----cC-----------cCCCceEEEecCCE
Q 036540 26 ADAAVKKYQFDVQVKN--VSRLCN---------------SKPI--VTV-----NG-----------MFPGPTIYIREGDR 70 (562)
Q Consensus 26 ~~~~~~~~~l~~~~~~--~~~~g~---------------~~~~--~~~-----Ng-----------~~pgP~i~v~~Gd~ 70 (562)
..+.+|+|.|.+++.. +++++. .+.+ +.| ++ ++|||+|||++||+
T Consensus 129 ~~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~ 208 (770)
T 2r7e_B 129 FQKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDN 208 (770)
T ss_dssp CCCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSC
T ss_pred CCCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCE
Confidence 3678999999999987 456543 1222 223 22 58999999999999
Q ss_pred EEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCC---------CCCceEEecCchhh--c-
Q 036540 71 VLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTG---------QRGTLWWHAHILWL--R- 138 (562)
Q Consensus 71 v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~---------~~Gt~wyH~h~~~~--~- 138 (562)
|+|+|+|.++++++|||||+++.... .||+++ +||+|+||++++|+|++++ ++||||||||.+.+ .
T Consensus 209 v~v~~~N~l~~~~siH~HG~~~~~~~-~dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~ 286 (770)
T 2r7e_B 209 IMVTFRNQASRPYSFYSSLISYEEDQ-RQGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVH 286 (770)
T ss_dssp EEEEEECCSSSCCCCCBTTCCCCCCS-SSCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHH
T ss_pred EEEEEEECCCCCcceeeccccccccc-CCCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHh
Confidence 99999999999999999999998874 259998 8999999999999999854 89999999999874 3
Q ss_pred ccceeEEEEcCCCCCCCC--CCCCCcceEEEEee------ccccCHHHHHHh-ccc-CCCC---CCCCCceeECCccCCC
Q 036540 139 ATVYGAIVIMPKERTSFP--FPQPYQETNIILGE------WWNSDVETIVNQ-GNK-LGLP---PQTSDAHTINGKSGPL 205 (562)
Q Consensus 139 ~Gl~G~iiV~~~~~~~~~--~~~~~~e~~l~~~d------~~~~~~~~~~~~-~~~-~g~~---~~~~~~~~iNG~~~~~ 205 (562)
+||+|+|||+++...... ....++|++|++++ |+.+........ ... .... ....+.++|||+.+.
T Consensus 287 ~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~~- 365 (770)
T 2r7e_B 287 SGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENMERNCRAPCNIQMEDPTFKENYRFHAINGYIMD- 365 (770)
T ss_dssp TSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGSSCSCCSSCCCSSSSSSTTTSCEECTTSCTTT-
T ss_pred CCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchhhcccCccccccCCccccccCCccccCCccCC-
Confidence 899999999988653211 12357899888754 444322100000 000 0000 012356899999751
Q ss_pred CCCCCCcceEEEEecCcEEEEEEEecCCC-CeEEEEEcCcceEEEEeCCCccCceEEeEEEeCCCceEEEEEEeCCCCCe
Q 036540 206 FPCSEKHTFAMEVESGKTYLLRIVNAALN-DELFFAIAGHNMTVVEIDAVYTKPFTTQAILIAPGQTTNVLVKADQSPSR 284 (562)
Q Consensus 206 ~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~ 284 (562)
..+.+++++|++|||||+|++.. ..|+||||||.|+|++.||. .+|++.|.||||++|+|++++ ||.
T Consensus 366 ------~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~-pG~ 433 (770)
T 2r7e_B 366 ------TLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSK-AGI 433 (770)
T ss_dssp ------TCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSS-CBC
T ss_pred ------CCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCC-CCc
Confidence 34678999999999999999854 48999999999999999873 899999999999999999998 799
Q ss_pred EEEEEee
Q 036540 285 YFMAARP 291 (562)
Q Consensus 285 ~~i~~~~ 291 (562)
|+||||.
T Consensus 434 w~~hcH~ 440 (770)
T 2r7e_B 434 WRVECLI 440 (770)
T ss_dssp CCBCCCS
T ss_pred eEEEecc
Confidence 9999995
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=2.3e-37 Score=342.62 Aligned_cols=218 Identities=19% Similarity=0.254 Sum_probs=168.7
Q ss_pred cCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCC-----CCCcccccccCCCCeEEEEEEeCCCCC-----
Q 036540 57 MFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWAD-----GPAYITQCPIKTGNSYTYDFNVTGQRG----- 126 (562)
Q Consensus 57 ~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~D-----Gv~~~t~~~i~pG~~~~y~~~~~~~~G----- 126 (562)
.+|||+||+++||+|+|+|+|.+++++||||||+.+. .+|+| |+++++||+|+||++++|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999984 45565 567788999999999999999965554
Q ss_pred ----ceEEecCchhhc---ccceeEEEEcCCCCCC-CC-CCCCCcceEEEEee------ccccCHHHHHHh-cccCC-CC
Q 036540 127 ----TLWWHAHILWLR---ATVYGAIVIMPKERTS-FP-FPQPYQETNIILGE------WWNSDVETIVNQ-GNKLG-LP 189 (562)
Q Consensus 127 ----t~wyH~h~~~~~---~Gl~G~iiV~~~~~~~-~~-~~~~~~e~~l~~~d------~~~~~~~~~~~~-~~~~g-~~ 189 (562)
|||||||.+.+. +||+|+|||+++.... .. ....|+|++|++++ |+.......+.. ..... ..
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~~~~~~~p~~v~~~~ 606 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENIQRFLPNPAGVQLED 606 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHHHHHSSSSSCSCCCC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccchhhcccCchhccccc
Confidence 999999998764 8999999999875321 11 12458899999965 443322111100 00000 00
Q ss_pred C---CCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCC-CeEEEEEcCcceEEEEeCCCccCceEEeEEE
Q 036540 190 P---QTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALN-DELFFAIAGHNMTVVEIDAVYTKPFTTQAIL 265 (562)
Q Consensus 190 ~---~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~v~ 265 (562)
+ .....++|||+.+. ..+ +.+++||+|||||+|++.. ..|+||||||.|+|+ +..+|++.
T Consensus 607 ~~~~~~~~~~~ING~~~~-------~~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~Dtv~ 670 (742)
T 2r7e_A 607 PEFQASNIMHSINGYVFD-------SLQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYEDTLT 670 (742)
T ss_dssp HHHHGGGCCBCTTTTCSS-------CCC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBCSSC
T ss_pred ccccccCceeeecCcCCC-------CCc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccceeEEE
Confidence 0 01134789999752 113 8999999999999998754 479999999999986 57899999
Q ss_pred eCCCceEEEEEEeCCCCCeEEEEEeec
Q 036540 266 IAPGQTTNVLVKADQSPSRYFMAARPF 292 (562)
Q Consensus 266 l~pgeR~dv~v~~~~~~G~~~i~~~~~ 292 (562)
|.||||++|+|++++ ||.|++|||..
T Consensus 671 l~Pg~~~~v~~~ad~-pG~w~~hcH~~ 696 (742)
T 2r7e_A 671 LFPFSGETVFMSMEN-PGLWILGCHNS 696 (742)
T ss_dssp CCCCSSEECCEECCC-CCCSCCEECCC
T ss_pred ECCCcEEEEEEEcCC-CeEEEEEeCCc
Confidence 999999999999998 79999999964
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.96 E-value=8.8e-30 Score=252.80 Aligned_cols=232 Identities=19% Similarity=0.177 Sum_probs=163.1
Q ss_pred CceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccCceEEeEEEeCCCceEE
Q 036540 194 DAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTKPFTTQAILIAPGQTTN 273 (562)
Q Consensus 194 ~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pgeR~d 273 (562)
..+++||+.- .|+|++++|+++++|+.|.. ...+++|+||.. ..+.||.+. .+...|.||++++
T Consensus 55 ~~~~~ng~~p---------gP~i~~~~Gd~v~v~~~N~~-~~~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~ 118 (288)
T 3gdc_A 55 KGWSYNGRIP---------GPTLWAREGDALRIHFTNAG-AHPHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFT 118 (288)
T ss_dssp EEEEETTBSS---------CCEEEEETTCEEEEEEEECS-SSCBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEE
T ss_pred EEEEECCccC---------CCcEEEeCCCEEEEEEEeCC-CCcccEEecccc--ccccCCCCC----ccceeECCCCEEE
Confidence 6799999852 38999999999999999998 678999999975 357898753 2345789999999
Q ss_pred EEEEeCCCCCeEEEEEeecCCCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhccccccccCCCCCCCCCCCC
Q 036540 274 VLVKADQSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNYSSKLRSLNTPQYPANVP 353 (562)
Q Consensus 274 v~v~~~~~~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p 353 (562)
..+++++ +|.||+|||........ .....+.+.+...... +
T Consensus 119 y~f~~~~-~Gt~~yH~H~~~~~~~~--~~Gl~G~liV~~~~~~--------~---------------------------- 159 (288)
T 3gdc_A 119 YEFDATP-FGTHLYHCHQSPLAPHI--AKGLYGGFIVEPKEGR--------P---------------------------- 159 (288)
T ss_dssp EEEECCS-CEEEEEECCCSSHHHHH--HTTCEEEEEEECSSCC--------C----------------------------
T ss_pred EEEEcCC-CccEEEEecCcchHHHH--hCcCeEEEEEeCCccC--------C----------------------------
Confidence 9999976 79999999953100000 1123444444321100 0
Q ss_pred CCcceEEEEEeccCCCCCCCCCCC-ceeEEeecccccccCccccceeeeccccccccCCCCCCCCCcCcCCCCCCCCCcC
Q 036540 354 LRVDRHLFYTIGLGQNPCPSCQNG-TQLTASLNNITFVMPKIGLLQAHYFNISGVFRTDFPDRPPVPFNYTGAPLTANLG 432 (562)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (562)
..++++.+.+.-.... ++ ..-.|.+||+.|..
T Consensus 160 -~~d~e~~l~~~d~~~~-----~g~~~~~~~iNG~~~~~----------------------------------------- 192 (288)
T 3gdc_A 160 -PADDEMVMVMNGYNTD-----GGDDNEFYSVNGLPFHF----------------------------------------- 192 (288)
T ss_dssp -CCSEEEEEEEEEECCS-----STTCCSEEEETTSTTHH-----------------------------------------
T ss_pred -CCcceEEEEEeeEecC-----CCCCcceEEECcccccc-----------------------------------------
Confidence 0123333322110000 01 11235666654321
Q ss_pred CCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEE
Q 036540 433 TSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAI 512 (562)
Q Consensus 433 ~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~i 512 (562)
....+.++.|++|+|.+.|.+. ....|||||||+.|+|++.+.. +..+.++||+.|+|++.+.|
T Consensus 193 ---~~~~l~v~~Ge~vr~~l~N~g~-~~~~H~fHlhG~~f~v~~~g~~------------~~~~~~~Dtv~v~pg~~~~v 256 (288)
T 3gdc_A 193 ---MDFPVKVKQHELVRIHLINVLE-YDPINSFHIHGNFFHYYPTGTM------------LTPSEYTDTISQVQGQRGIL 256 (288)
T ss_dssp ---HHSCEEEETTCCEEEEEEECCC-SSSEEEEEETTCCEEEEETTCC------------SSCSEEESEEEEETTCEEEE
T ss_pred ---cCcccccCCCCEEEEEEEeCCC-CCcceeEEEcCCEEEEEcCCCc------------cCCCceeeEEEeCCCceEEE
Confidence 0122577899999999999751 1246999999999999975421 23458999999999999999
Q ss_pred EEEecCceeEEEEeehhHhHhccceEEEEEe
Q 036540 513 RFRADNPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 513 rf~~dnpG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
+|++++||.|+||||+++|++.|||..|+|.
T Consensus 257 ~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~ 287 (288)
T 3gdc_A 257 ELRFPYPGKFMFHAHKTEFAELGWMGFFEVS 287 (288)
T ss_dssp EECCCSCEEEEEECSSHHHHTTTCEEEEEEE
T ss_pred EEECCCCEEEEEEecChHHHhcCCCEEEEEe
Confidence 9999999999999999999999999999986
No 40
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.95 E-value=5.2e-28 Score=245.67 Aligned_cols=241 Identities=17% Similarity=0.160 Sum_probs=157.5
Q ss_pred CceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEe---CCCccCceEEeEEEeCCCc
Q 036540 194 DAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEI---DAVYTKPFTTQAILIAPGQ 270 (562)
Q Consensus 194 ~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~---DG~~~~p~~~d~v~l~pge 270 (562)
..+++||+.- .|+|++++|+++|+||+|.. ...+.+|.|| +.+.+. ||.+. ++...|.|||
T Consensus 24 ~~~~~NG~~p---------GP~I~v~~Gd~v~v~v~N~l-~~~~siH~HG--~~~~~~~~~DGvp~----vtq~~I~PG~ 87 (339)
T 2zwn_A 24 KVFGFNGQVP---------GPLIHVQEGDDVIVNVTNNT-SLPHTIHWHG--VHQKGTWRSDGVPG----VTQQPIEAGD 87 (339)
T ss_dssp EEEEETTBSS---------CCEEEEETTCEEEEEEEEES-SSCBCCEEET--CCCTTCGGGSCCBT----TTBCCBCTTC
T ss_pred EEEEECCccC---------CCeEEEECCCEEEEEEEECC-CCCccEEeCC--CCcCCCcccCCCCc----cccCccCCCC
Confidence 5789999841 28999999999999999998 4555566655 555554 99853 2345799999
Q ss_pred eEEEEEEeCCCCCeEEEEEeecCCCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhccccccccCCCCCCCCC
Q 036540 271 TTNVLVKADQSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNYSSKLRSLNTPQYPA 350 (562)
Q Consensus 271 R~dv~v~~~~~~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~ 350 (562)
|+++.+++++ +|+||+|||.....+ .......+.+........ .+
T Consensus 88 ~~~y~f~~~~-~Gt~wyH~H~~~~~q--~~~~Gl~G~liV~p~~~~------~~-------------------------- 132 (339)
T 2zwn_A 88 SYTYKFKADR-IGTLWYHCHVNVNEH--VGVRGMWGPLIVDPKQPL------PI-------------------------- 132 (339)
T ss_dssp EEEEEEECCS-CEEEEEECCSSHHHH--TTTSCCEEEEEEECSSCC------TT--------------------------
T ss_pred eEEEEEECCC-CEEEEEEecCCchhh--hhcCCceEeEEecCCCcc------cc--------------------------
Confidence 9999999986 799999998521000 110122333333211100 00
Q ss_pred CCCCCcceEEEEEecc---CCCCCCC--CCCC-ceeEEeecccccccCccccceeeeccccccccCCCCCCCCCcCcCCC
Q 036540 351 NVPLRVDRHLFYTIGL---GQNPCPS--CQNG-TQLTASLNNITFVMPKIGLLQAHYFNISGVFRTDFPDRPPVPFNYTG 424 (562)
Q Consensus 351 ~~p~~~~~~~~~~~~~---~~~~~~~--~~~g-~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~ 424 (562)
+...++.+.+.+.- ....... .... ..-.|.+||+.+
T Consensus 133 --~~~~d~e~~l~l~d~~~~~~~~~~~~g~~~~~~~~~~ING~~~----------------------------------- 175 (339)
T 2zwn_A 133 --EKRVTKDVIMMMSTWESAVADKYGEGGTPMNVADYFSVNAKSF----------------------------------- 175 (339)
T ss_dssp --GGGCSEEEEEEEEEECGGGTTCTTCCCSTTSCCCEEEETTBCT-----------------------------------
T ss_pred --cccCCceEEEEeeheecccccccCCCCCCccccceEEEccccC-----------------------------------
Confidence 00112222111110 0000000 0000 001133444321
Q ss_pred CCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeee
Q 036540 425 APLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGV 504 (562)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v 504 (562)
.....+.++.|++++|.|.|.+ ...||||||||+|+||+.+.. .+.+|.++||+.|
T Consensus 176 ----------~~~~~~~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~DG~-----------~~~~p~~~dtv~l 231 (339)
T 2zwn_A 176 ----------PLTQPLRVKKGDVVKIRFFGAG---GGIHAMHSHGHDMLVTHKDGL-----------PLDSPYYADTVLV 231 (339)
T ss_dssp ----------TSSCCEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEETTE-----------EEEEEEEESEEEE
T ss_pred ----------CCcccEEECCCCEEEEEEEeCC---CceEEEEECCcEEEEEEeCCe-----------ecCCCcEEEEEEE
Confidence 1123467889999999999976 558999999999999998421 1234788999999
Q ss_pred cCCCEEEEEEEecCceeEEEEeehhHh------HhccceEEEEEecCC
Q 036540 505 PTGGWTAIRFRADNPGVWFMHCHLELH------TMWGLKMAFVVENGK 546 (562)
Q Consensus 505 pp~g~~~irf~~dnpG~w~~HCHil~H------~d~GM~~~~~V~~~~ 546 (562)
+|++++.|+|++|+||.|++|||+++| ++.|||+.+.|....
T Consensus 232 ~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 232 SPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp CTTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred CCCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 999999999999999999999999999 889999999987543
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.95 E-value=2.1e-28 Score=245.87 Aligned_cols=243 Identities=19% Similarity=0.197 Sum_probs=163.1
Q ss_pred CceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEE-EEeCCCccCceEEeEEEeCCCceE
Q 036540 194 DAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTV-VEIDAVYTKPFTTQAILIAPGQTT 272 (562)
Q Consensus 194 ~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~v-ia~DG~~~~p~~~d~v~l~pgeR~ 272 (562)
..+++||+. ..|+|+++.|+++++|+.|.. ...+.+|+||....- .+.||.+. +....|.||+++
T Consensus 23 ~~~~~ng~~---------pGP~i~~~~Gd~v~v~~~N~l-~~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~ 88 (318)
T 3g5w_A 23 HTFAFNGQV---------PAPLIHVMEGDDVTVNVTNMT-TLPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTF 88 (318)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEECS-SSCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEE
T ss_pred EEEEECCcc---------CCceEEEeCCCEEEEEEEeCC-CCceeEEecCcCCCCCcccCCCcc----cccccCCCCCEE
Confidence 578999985 238999999999999999998 678899999986553 36799753 223578999999
Q ss_pred EEEEEeCCCCCeEEEEEeecCCCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhccccccccCCCCCCCCCCC
Q 036540 273 NVLVKADQSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNYSSKLRSLNTPQYPANV 352 (562)
Q Consensus 273 dv~v~~~~~~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~ 352 (562)
+..+++++ +|+||+|||......... ....+.|........ + .
T Consensus 89 ~y~f~~~~-~Gt~wYH~H~~~~~~~~~--~Gl~G~lIV~~~~~~--------~--------------------------~ 131 (318)
T 3g5w_A 89 TYKFKAEP-AGTMWYHCHVNVNEHVTM--RGMWGPLIVEPKNPL--------P--------------------------I 131 (318)
T ss_dssp EEEEECCS-CEEEEEECCSSHHHHHHH--SCCEEEEEEECSSCC--------H--------------------------H
T ss_pred EEEEEcCC-CEEEEEEccCChhhhhcc--CCCEEEEEEcCCCcc--------c--------------------------c
Confidence 99999987 799999999521000000 123344444321110 0 0
Q ss_pred CCCcceEEEEEeccCC-----CCCCCCC-CCceeEEeecccccccCccccceeeeccccccccCCCCCCCCCcCcCCCCC
Q 036540 353 PLRVDRHLFYTIGLGQ-----NPCPSCQ-NGTQLTASLNNITFVMPKIGLLQAHYFNISGVFRTDFPDRPPVPFNYTGAP 426 (562)
Q Consensus 353 p~~~~~~~~~~~~~~~-----~~~~~~~-~g~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 426 (562)
+...++.+.+.+.-.. ....... ....-.|.+||+.|.
T Consensus 132 ~~~~d~e~~l~l~dw~~~~~~~~~~~~~~~~~~d~~~ING~~~~------------------------------------ 175 (318)
T 3g5w_A 132 EKTVTKDYILMLSDWVSSWANKPGEGGIPGDVFDYYTINAKSFP------------------------------------ 175 (318)
T ss_dssp HHTCCEEEEEEEEEECGGGTTCTTCCCCTTCCCCEEEETTBCBT------------------------------------
T ss_pred cccccceeEEEEEeeccccccccccCCCCCCcCcEEEEcCcCCC------------------------------------
Confidence 0001222211111000 0000000 000112445554321
Q ss_pred CCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecC
Q 036540 427 LTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPT 506 (562)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp 506 (562)
....+.++.|++|+|.|.|.+ ...||||||||.|+|++++.+ .+.+|.++||+.|+|
T Consensus 176 ---------~~~~l~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~dG~-----------~~~~p~~~dtv~l~p 232 (318)
T 3g5w_A 176 ---------ETQPIRVKKGDVIRLRLIGAG---DHVHAIHTHGHISQIAFKDGF-----------PLDKPIKGDTVLIGP 232 (318)
T ss_dssp ---------SSCCEEECTTCEEEEEEEECS---SSCEEEEETTSCEEEEEETTE-----------EEEEEEEESEEEECT
T ss_pred ---------CCccEEeCCCCEEEEEEEeCC---CceEEEEECCcEEEEEecCCc-----------ccCCCccccEEEECC
Confidence 122367889999999999976 458999999999999998421 123577899999999
Q ss_pred CCEEEEEEEecCceeEEEEeehhHhHh------ccceEEEEEecCC
Q 036540 507 GGWTAIRFRADNPGVWFMHCHLELHTM------WGLKMAFVVENGK 546 (562)
Q Consensus 507 ~g~~~irf~~dnpG~w~~HCHil~H~d------~GM~~~~~V~~~~ 546 (562)
++++.|+|++++||.|+||||+++|++ .|||..++|+...
T Consensus 233 ger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 233 GERYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp TCEEEEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred CCEEEEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999999999999999999998 6899999987543
No 42
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.95 E-value=6.1e-28 Score=238.04 Aligned_cols=226 Identities=14% Similarity=0.165 Sum_probs=161.9
Q ss_pred eeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccCceEEeEEEeCCCceEEEE
Q 036540 196 HTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTKPFTTQAILIAPGQTTNVL 275 (562)
Q Consensus 196 ~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~ 275 (562)
...||+. ..|+|+++.|+++++++.|.. ...+++|.||..+.. ..||.+ +..-.|.||+++...
T Consensus 27 ~~~ng~~---------pGP~i~~~~Gd~v~v~~~N~~-~~~~siH~HG~~~~~-~~DG~~-----~t~~~i~pG~~~~Y~ 90 (276)
T 3kw8_A 27 EKGKASV---------PGPLIEVNEGDTLHIEFTNTM-DVRASLHVHGLDYEI-SSDGTA-----MNKSDVEPGGTRTYT 90 (276)
T ss_dssp STTCCBS---------SCCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCCT-----TTTCSBCTTCEEEEE
T ss_pred eccCCcc---------cCCeEEEECCCEEEEEEEECC-CCCccEeecCcccCC-ccCCCc-----CCcCCCCCCCEEEEE
Confidence 4568864 238999999999999999997 788999999987654 579975 233568999999999
Q ss_pred EEeCCC------------CCeEEEEEeecCCCC-CCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhccccccccC
Q 036540 276 VKADQS------------PSRYFMAARPFMDAP-IPVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNYSSKLRS 342 (562)
Q Consensus 276 v~~~~~------------~G~~~i~~~~~~~~~-~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~ 342 (562)
++++++ .|.||.|||...... .........+.|.......
T Consensus 91 f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~--------------------------- 143 (276)
T 3kw8_A 91 WRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD--------------------------- 143 (276)
T ss_dssp EECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC---------------------------
T ss_pred EEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCC---------------------------
Confidence 999762 489999998522100 0000112333333321100
Q ss_pred CCCCCCCCCCCCCcceEEEEEeccCCCCCCCCCCCceeEEeecccccccCccccceeeeccccccccCCCCCCCCCcCcC
Q 036540 343 LNTPQYPANVPLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNITFVMPKIGLLQAHYFNISGVFRTDFPDRPPVPFNY 422 (562)
Q Consensus 343 l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~ 422 (562)
+ . .|+.+.+.+. .|.|||+.|.
T Consensus 144 ~--------~---~drE~~l~l~---------------~~~iNG~~~~-------------------------------- 165 (276)
T 3kw8_A 144 V--------L---PDATHTIVFN---------------DMTINNRKPH-------------------------------- 165 (276)
T ss_dssp C--------C---CSEEEEEEEE---------------TTEETTCCTT--------------------------------
T ss_pred c--------c---cccceEEEec---------------ccccceeccc--------------------------------
Confidence 0 0 1444444322 1667775431
Q ss_pred CCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCcccee
Q 036540 423 TGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTV 502 (562)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv 502 (562)
..+.+.++.|++|+|+|.|.+ .+.|||||||+.|++++.| .++.. ...+.++||+
T Consensus 166 -------------~~p~i~v~~G~~vri~l~N~~---~~~Hp~HlHG~~f~v~~~G--~~~~p-------~~~~~~~Dtv 220 (276)
T 3kw8_A 166 -------------TGPDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRTG--ILTGP-------DDPSRVIDNK 220 (276)
T ss_dssp -------------CCCCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSSS--SCCST-------TCCCCEESEE
T ss_pred -------------CCCCEEEecCCEEEEEEecCC---CcceeEEEccceeEEeccC--ccCCC-------cccccCCccE
Confidence 123467889999999999976 5799999999999997543 22211 1235689999
Q ss_pred eecCCCEEEEEEEec---CceeEEEEeehhHhHhccceEEEEEecCCC
Q 036540 503 GVPTGGWTAIRFRAD---NPGVWFMHCHLELHTMWGLKMAFVVENGKS 547 (562)
Q Consensus 503 ~vpp~g~~~irf~~d---npG~w~~HCHil~H~d~GM~~~~~V~~~~~ 547 (562)
.|+|++...++|+++ |||.|+||||+++|++.|||..|.|.+.++
T Consensus 221 ~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 221 ITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp EECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred EeCCCceEEEEEEeccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 999999999999997 899999999999999999999999997644
No 43
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.95 E-value=1.6e-27 Score=237.25 Aligned_cols=218 Identities=19% Similarity=0.259 Sum_probs=151.5
Q ss_pred ceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccCceEEeEEEeCCCceEEEEEEeCC------------
Q 036540 213 TFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTKPFTTQAILIAPGQTTNVLVKADQ------------ 280 (562)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~------------ 280 (562)
.|+|+++.|++++++|.|.. ....++|.||..+. -+.||.++. .-.|.|||++...++++.
T Consensus 57 GP~i~~~~GD~v~v~~~N~l-~~~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~ 129 (299)
T 3t9w_A 57 GPVLEMWEGDTLEIDLVNTT-DRVLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAEG 129 (299)
T ss_dssp CCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CceEEEECCeEEEEEEEECC-CCCccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCCC
Confidence 38999999999999999998 67889999997654 356887541 124789999999988763
Q ss_pred CCCeEEEEEeecCCCCCC-CCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhccccccccCCCCCCCCCCCCCCcceE
Q 036540 281 SPSRYFMAARPFMDAPIP-VDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNYSSKLRSLNTPQYPANVPLRVDRH 359 (562)
Q Consensus 281 ~~G~~~i~~~~~~~~~~~-~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~ 359 (562)
..|.||.|||........ .-.....+.|....... ..+|+.
T Consensus 130 ~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~--------------------------------------~~~d~e 171 (299)
T 3t9w_A 130 TAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD--------------------------------------LLPKRQ 171 (299)
T ss_dssp CCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--------------------------------------CCCSEE
T ss_pred CceeEEEecCCcccccchhhhcccccceEEEecccc--------------------------------------cCcccc
Confidence 359999999853211000 00012233333321100 012455
Q ss_pred EEEEeccCCCCCCCCCCCceeEEeecccccccCccccceeeeccccccccCCCCCCCCCcCcCCCCCCCCCcCCCCceee
Q 036540 360 LFYTIGLGQNPCPSCQNGTQLTASLNNITFVMPKIGLLQAHYFNISGVFRTDFPDRPPVPFNYTGAPLTANLGTSLGTRL 439 (562)
Q Consensus 360 ~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (562)
+.+.+.. |.+|++.+. +.+.
T Consensus 172 ~~l~~~~---------------~~~Ng~~~~---------------------------------------------~~p~ 191 (299)
T 3t9w_A 172 FTVVFND---------------MMINNRAHH---------------------------------------------DAPT 191 (299)
T ss_dssp EEEEEET---------------TEETTCCTT---------------------------------------------CCCE
T ss_pred ceeeeee---------------eeecCcccc---------------------------------------------cccc
Confidence 5443321 456654221 1234
Q ss_pred EEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEE---EEEEEe
Q 036540 440 SKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWT---AIRFRA 516 (562)
Q Consensus 440 ~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~---~irf~~ 516 (562)
+.++.|++|+|+|.|.+ ...||||||||.|+|+..+... .....+.++||+.|.|+... +++|++
T Consensus 192 l~v~~Ge~Vr~~liN~~---~~~HpfHlHGh~F~v~~~g~~~---------~~~~~~~~~Dtv~v~PGe~~~~~via~~~ 259 (299)
T 3t9w_A 192 FEANLGERVEWIAIGHG---SNFHTFHLHGHRWLDNRTGMRT---------SEYDPSPLIDIKDLNPGVSFGFQVIAGEG 259 (299)
T ss_dssp EEEETTCEEEEEEEEES---SCCCEEEETTCCEESSSSSSCC---------STTCCCCEESEEECCTTCEEEEEEETTTT
T ss_pred ceecCCCEEEEEEEecc---ccceeeeEecceEEEEeccccc---------CCcCCCCceeeEEeCCceeEEEEEEEeeC
Confidence 67889999999999976 6789999999999998775321 12234568999999998655 455667
Q ss_pred cCceeEEEEeehhHhHhccceEEEEEecCCC
Q 036540 517 DNPGVWFMHCHLELHTMWGLKMAFVVENGKS 547 (562)
Q Consensus 517 dnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 547 (562)
+|||.|+|||||++|++.|||..|+|++.+.
T Consensus 260 dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 260 VGPGMWMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCeeEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 8999999999999999999999999987643
No 44
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.90 E-value=3.2e-25 Score=221.94 Aligned_cols=237 Identities=13% Similarity=0.059 Sum_probs=134.5
Q ss_pred eeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccC----ceEEeEEEeCCCce
Q 036540 196 HTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTK----PFTTQAILIAPGQT 271 (562)
Q Consensus 196 ~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~----p~~~d~v~l~pgeR 271 (562)
.++||.++ |+|++++|+++|+||+|.. ...+.+|.||..+.. +.||.+.. +..++...|.|||+
T Consensus 52 ~~~n~~pG----------P~I~v~~Gd~v~v~~~N~l-~~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~ 119 (306)
T 1sdd_A 52 SRTSGLLG----------PTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQE 119 (306)
T ss_dssp CSSCCSCC----------CCEEEETTCEEEEEEEECS-SSCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCE
T ss_pred cccCCccC----------CEEEEeCCCEEEEEEEECC-CCcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCe
Confidence 46888766 7899999999999999987 678889999887432 57887641 22333578999999
Q ss_pred EEEEEEeCCCC---------CeEEEEEeecCCCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhccccccccC
Q 036540 272 TNVLVKADQSP---------SRYFMAARPFMDAPIPVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNYSSKLRS 342 (562)
Q Consensus 272 ~dv~v~~~~~~---------G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~ 342 (562)
++..+++++.. |+||+|+|..... ...... ..+++.......... +..+..+. ++.
T Consensus 120 ~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~-q~~~GL-~G~liV~~~~~~~~~---~~~~~~d~---------e~~- 184 (306)
T 1sdd_A 120 YTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVE-DFNSGL-IGPLLICKKGTLTED---GTQKMFEK---------QHV- 184 (306)
T ss_dssp EEEEEECCGGGSCCSSSCSEEEEEEECCSSSHH-HHHTTC-CEEEEEECTTCBCTT---SSBSSSCC---------CCC-
T ss_pred EEEEEEeCCccCCCCCCCCceEEEEeccCCchh-hhccCc-eEEEEEccCCCCCcc---CCcCcccc---------eEE-
Confidence 99999998743 6999999842100 001112 234444432111000 00000000 000
Q ss_pred CCCCCCCCCCCCCcceEEEEEeccCCCCCCCCCCCceeEEeecccccccCccccceeeeccccccccCCCCCCCCCcCcC
Q 036540 343 LNTPQYPANVPLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNITFVMPKIGLLQAHYFNISGVFRTDFPDRPPVPFNY 422 (562)
Q Consensus 343 l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~ 422 (562)
+ .+. + +...... .......+.+||+.+.
T Consensus 185 l-------~~~---d----~d~~~~~------~~~~~~~~~ING~~~~-------------------------------- 212 (306)
T 1sdd_A 185 L-------MFA---V----FDESKSW------NQTSSLMYTVNGYVNG-------------------------------- 212 (306)
T ss_dssp C-------BCC---E----EETTSSS------SCCCCEEECSSSCCSS--------------------------------
T ss_pred E-------EEE---e----ccccccc------ccCCCcceeeCCEecC--------------------------------
Confidence 0 000 0 0000000 0000112344543220
Q ss_pred CCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCcccee
Q 036540 423 TGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTV 502 (562)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv 502 (562)
..+.+.++.|++++|.|.|.+. ....||||+|||.|++ . +.++||+
T Consensus 213 -------------~~p~l~v~~G~~vrlrliN~g~-~~~~h~~hlhG~~~~~--d------------------G~~~dtv 258 (306)
T 1sdd_A 213 -------------TMPDITVCAHDHISWHLIGMSS-GPELFSIHFNGQVLEQ--N------------------HHKISAI 258 (306)
T ss_dssp -------------CCCCCCCCCC------BBCCCS-SSCEECCBCSSTTCEE--T------------------TEECSCC
T ss_pred -------------CCcceEEcCCCEEEEEEEeCCC-CCccEEEEECCcEeee--C------------------CEEcceE
Confidence 0122456789999999999762 1257999999999985 1 1358999
Q ss_pred eecCCCEEEEEEEecCceeEEEEeehhHhHhccceEEEEEecC
Q 036540 503 GVPTGGWTAIRFRADNPGVWFMHCHLELHTMWGLKMAFVVENG 545 (562)
Q Consensus 503 ~vpp~g~~~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~~~ 545 (562)
.|.|++.+.|+|++++||.|+||||+++|++.|||..|.|++.
T Consensus 259 ~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 259 TLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp CEETTCCBC--------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred EECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 9999999999999999999999999999999999999999754
No 45
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.88 E-value=4.1e-22 Score=201.23 Aligned_cols=250 Identities=16% Similarity=0.117 Sum_probs=157.2
Q ss_pred CceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCC-CeEEEEEcCcceEEEEeCCCccCceEEeEEEeCCCceE
Q 036540 194 DAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALN-DELFFAIAGHNMTVVEIDAVYTKPFTTQAILIAPGQTT 272 (562)
Q Consensus 194 ~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pgeR~ 272 (562)
..+++||+.- .|++++++|+++|||++|.... ..+.+|+||.. +.||... ...|.|||++
T Consensus 59 ~~~~~ng~~p---------gP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~ 119 (327)
T 1kbv_A 59 RYWTFDGDVP---------GRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTS 119 (327)
T ss_dssp EEEEETTBSS---------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEE
T ss_pred EEEEECCccC---------CCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEE
Confidence 5689999842 3899999999999999999743 58899999863 5688642 2248999999
Q ss_pred EEEEEeCCCCCeEEEEEeecCCCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhccccccccCCCCCCCCCCC
Q 036540 273 NVLVKADQSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNYSSKLRSLNTPQYPANV 352 (562)
Q Consensus 273 dv~v~~~~~~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~ 352 (562)
++.+++++ +|.||+|||......... ....+.+.+..... +|..+... ..-+.+-... .. .
T Consensus 120 ~y~f~~~~-~Gt~wyH~h~~~~~~~~~--~Gl~G~~iV~~~~~--------~p~~d~e~-~l~~~d~~~~---~~----~ 180 (327)
T 1kbv_A 120 TFSFKALQ-PGLYIYHCAVAPVGMHIA--NGMYGLILVEPKEG--------LPKVDKEF-YIVQGDFYTK---GK----K 180 (327)
T ss_dssp EEEEECCS-CEEEEEECCCSSHHHHHH--TTCEEEEEEECTTC--------CCCCSEEE-EEEEEEECBS---SC----T
T ss_pred EEEEECCC-CeEEEEEeCCCChhhhhh--cceEEEEEEecCCC--------CCCCceEE-EEEeeeeecc---Cc----c
Confidence 99999988 799999998532110001 11233333332110 11111000 0000000000 00 0
Q ss_pred CCCcceEEEEEeccCCCCCCCCCCCceeEEeecccccccCccccceeeeccccccccCCCCCCCCCcCcCCCCCCCCCcC
Q 036540 353 PLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNITFVMPKIGLLQAHYFNISGVFRTDFPDRPPVPFNYTGAPLTANLG 432 (562)
Q Consensus 353 p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (562)
. ...... ..+.. ......-.+.+||+.+. .
T Consensus 181 -~-~~g~~~--~~~~~-----~~~~~~~~~~iNG~~~~--------------------------------------~--- 210 (327)
T 1kbv_A 181 -G-AQGLQP--FDMDK-----AVAEQPEYVVFNGHVGA--------------------------------------L--- 210 (327)
T ss_dssp -T-CCEEEC--BCHHH-----HHHTCCSEEEETTSTTT--------------------------------------T---
T ss_pred -c-cccccc--cChhH-----hccCCCceEEEcCcccC--------------------------------------C---
Confidence 0 000000 00000 00000001223332110 0
Q ss_pred CCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEE
Q 036540 433 TSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAI 512 (562)
Q Consensus 433 ~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~i 512 (562)
.....+.++.|++++|.|.|.+ ....|+||+|||.|+||+...+. ..|.++|++.|.|++.+.|
T Consensus 211 --~~~~~l~v~~G~~vRlRliN~~--~~~~~~~~l~Gh~f~vi~~DG~~------------~~p~~~d~l~l~pGer~dv 274 (327)
T 1kbv_A 211 --TGDNALKAKAGETVRMYVGNGG--PNLVSSFHVIGEIFDKVYVEGGK------------LINENVQSTIVPAGGSAIV 274 (327)
T ss_dssp --SGGGCEEEETTEEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGSS------------CEECSBSEEEECTTEEEEE
T ss_pred --CCceeEEeCCCCEEEEEEECCC--CCCceeEEEeCCEEEEEEcCCCc------------CCCCceeEEEECCCCEEEE
Confidence 0124478889999999999975 24689999999999999985331 2367899999999999999
Q ss_pred EEEecCceeEEEEeehhHhH-hccceEEEEEecCCC
Q 036540 513 RFRADNPGVWFMHCHLELHT-MWGLKMAFVVENGKS 547 (562)
Q Consensus 513 rf~~dnpG~w~~HCHil~H~-d~GM~~~~~V~~~~~ 547 (562)
.|++++||.|.+|||+.+|. ..||++.+.|+....
T Consensus 275 ~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~~ 310 (327)
T 1kbv_A 275 EFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 310 (327)
T ss_dssp EEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred EEEeCCCeEEEEEeccccccccCCcEEEEEECCCCC
Confidence 99999999999999999995 889999999986543
No 46
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.88 E-value=1.4e-21 Score=198.88 Aligned_cols=94 Identities=22% Similarity=0.296 Sum_probs=78.4
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCC--ccceeeecCCCEEEEEEE
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPP--ERNTVGVPTGGWTAIRFR 515 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~--~rDTv~vpp~g~~~irf~ 515 (562)
+.+.++.|++++|++.|.+ ...|++|+|||.|+|+.. |.+ .+++ ++||+.|.+++.+.|.|+
T Consensus 231 ~~l~v~~G~r~Rl~n~~~~---~~~~~~~i~gh~~~Vi~d--G~~-----------~~~p~~~~dtv~l~pGer~~v~v~ 294 (340)
T 2bw4_A 231 HALTAAVGERVLVVHSQAN---RDTRPHLIGGHGDYVWAT--GKF-----------RNPPDLDQETWLIPGGTAGAAFYT 294 (340)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETT--CCT-----------TSCCEEEESCCCBCTTEEEEEEEE
T ss_pred CceEcCCCCEEEEEECCCC---CccceEEecCcceEEeCC--Ccc-----------cCCccccceEEEeCCCceEEEEEE
Confidence 4578899999998887754 567889999999999853 221 2233 479999999999999999
Q ss_pred ecCceeEEEEeehh-HhHhccceEEEEEecCCC
Q 036540 516 ADNPGVWFMHCHLE-LHTMWGLKMAFVVENGKS 547 (562)
Q Consensus 516 ~dnpG~w~~HCHil-~H~d~GM~~~~~V~~~~~ 547 (562)
+++||.|+||||++ +|++.|||+.|.|.....
T Consensus 295 ~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 295 FRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred CCCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 99999999999999 599999999999987654
No 47
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.88 E-value=5.1e-22 Score=219.01 Aligned_cols=230 Identities=13% Similarity=0.195 Sum_probs=141.5
Q ss_pred eEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccC---c-eEEeEEEeCCCceEEEEEEeCCC-----CC-
Q 036540 214 FAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTK---P-FTTQAILIAPGQTTNVLVKADQS-----PS- 283 (562)
Q Consensus 214 ~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~---p-~~~d~v~l~pgeR~dv~v~~~~~-----~G- 283 (562)
|+|+++.|+++++||.|.. ...+.+|.||.... .+.||.+.. | ..+....|.|||+++..+++++. +|
T Consensus 69 P~I~~~~Gd~v~v~~~N~l-~~~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~ 146 (647)
T 1sdd_B 69 PVIRAEVDDVIQVRFKNLA-SRPYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGS 146 (647)
T ss_dssp CCEEEETTCEEEEEECCCS-SSCBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSSC
T ss_pred ceEEEeCCCEEEEEEEECC-CCceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCC
Confidence 8999999999999999998 67788999987764 478998532 1 22345689999999999999874 47
Q ss_pred ---eEEEEEeecCCCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhccccccccCCCCCCCCCCCCCCcceEE
Q 036540 284 ---RYFMAARPFMDAPIPVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNYSSKLRSLNTPQYPANVPLRVDRHL 360 (562)
Q Consensus 284 ---~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~ 360 (562)
+||+|+|..... ...... ..++|.......... +..|. . ++.+
T Consensus 147 ~c~T~wYHsH~~~~~-q~~~GL-~G~lIV~~~~~~~~~---~~~~~-~----------------------------~~e~ 192 (647)
T 1sdd_B 147 ACRAWAYYSAVNPEK-DIHSGL-IGPLLICRKGTLDKE---TNMPV-D----------------------------MREF 192 (647)
T ss_dssp SEEEEEEECCSSHHH-HHTTTC-EEEEEEECTTSSCTT---SCCCS-S----------------------------CCEE
T ss_pred CceEEEEccCCCCcc-cccccC-ccCEEEeeCCCcccc---cCCCC-c----------------------------ceeE
Confidence 999999952100 001111 233333321111000 00010 0 1111
Q ss_pred EEEec-cCC--C-CC------------CCCCCCceeEEeecccccccCccccceeeeccccccccCCCCCCCCCcCcCCC
Q 036540 361 FYTIG-LGQ--N-PC------------PSCQNGTQLTASLNNITFVMPKIGLLQAHYFNISGVFRTDFPDRPPVPFNYTG 424 (562)
Q Consensus 361 ~~~~~-~~~--~-~~------------~~~~~g~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~ 424 (562)
.+.+. +.. . .. ... ....-.+.+||+.+
T Consensus 193 ~l~l~~~d~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~iNG~~~----------------------------------- 236 (647)
T 1sdd_B 193 VLLFMVFDEKKSWYYDKKPTRSWRRASSEV-KNSHEFHAINGMIY----------------------------------- 236 (647)
T ss_dssp EEEEEEEEGGGSSCCC----------------CCCEEEEETTBSS-----------------------------------
T ss_pred EEEEEeecCccccccccCcccccccCCcch-hhcCceeccCCEec-----------------------------------
Confidence 11110 000 0 00 000 00001122333211
Q ss_pred CCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeee
Q 036540 425 APLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGV 504 (562)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~v 504 (562)
..+.+.++.|++|+|.|.|.+. ..+.||||+|||.|+|++. ++.++||+.|
T Consensus 237 -----------~~p~l~v~~G~~vrlrliN~~~-~~~~h~~hlhG~~f~vi~~-----------------d~~~~d~v~l 287 (647)
T 1sdd_B 237 -----------NLPGLRMYEQEWVRLHLLNLGG-SRDIHVVHFHGQTLLENGT-----------------QQHQLGVWPL 287 (647)
T ss_dssp -----------CCCCCEEETTCEEEEEEEECCC-TTCCEEEEETTCCEEECSS-----------------SCEEESSEEE
T ss_pred -----------CCCCeEEcCCCEEEEEEEeCCC-CCcceeEEEcCcEEEEecC-----------------CCcccceEEE
Confidence 1234677899999999999751 1358999999999999854 2457999999
Q ss_pred cCCCEEEEEEEecCceeEEEEeehhHhHhccceEEEEEec
Q 036540 505 PTGGWTAIRFRADNPGVWFMHCHLELHTMWGLKMAFVVEN 544 (562)
Q Consensus 505 pp~g~~~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~~ 544 (562)
.|++.+.|+|++++||.|+||||+++|++.|||+.|.|.+
T Consensus 288 ~pg~r~~v~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 288 LPGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp CTTEEEEEEEECCSSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred CCCeEEEEEEEeccceEeecccCcccccccccccceeeec
Confidence 9999999999999999999999999999999999999974
No 48
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.85 E-value=5.7e-20 Score=186.42 Aligned_cols=94 Identities=21% Similarity=0.248 Sum_probs=74.3
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCC--ccceeeecCCCEEEEEEE
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPP--ERNTVGVPTGGWTAIRFR 515 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~--~rDTv~vpp~g~~~irf~ 515 (562)
..+.++.|++++|++.|.+ ...|++++|+|.|.|+.. |.+ ..+. ++||+.|.|++.+.|.|+
T Consensus 225 ~~l~v~~Ger~Rl~n~~~~---~~~~~h~i~~h~~~Vi~d--G~~-----------~~~p~~~~dtv~l~pGer~~v~v~ 288 (333)
T 1mzy_A 225 GALKAKVGDNVLFVHSQPN---RDSRPHLIGGHGDLVWET--GKF-----------HNAPERDLETWFIRGGTAGAALYK 288 (333)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETT--CCT-----------TSCCEEEESBCCBCTTEEEEEEEE
T ss_pred cceEecCCCEEEEEECCCC---CccccEEECCCCeEEEeC--Ccc-----------cCCCccCcceEEECCCceEEEEEE
Confidence 3478889999998877643 233444477788888862 322 2222 589999999999999999
Q ss_pred ecCceeEEEEeehhHhH-hccceEEEEEecCCC
Q 036540 516 ADNPGVWFMHCHLELHT-MWGLKMAFVVENGKS 547 (562)
Q Consensus 516 ~dnpG~w~~HCHil~H~-d~GM~~~~~V~~~~~ 547 (562)
+++||.|+||||++.|+ +.|||+.|+|.....
T Consensus 289 a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 289 FLQPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp CCSCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred cCCCEEEEEecChhhhHhhCCCEEEEEEcCCCC
Confidence 99999999999999997 999999999987554
No 49
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.84 E-value=2e-22 Score=223.54 Aligned_cols=245 Identities=11% Similarity=0.073 Sum_probs=147.9
Q ss_pred ceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccCceEEeEEEeCCCceEEEEEEeCC---------CCC
Q 036540 213 TFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTKPFTTQAILIAPGQTTNVLVKADQ---------SPS 283 (562)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~---------~~G 283 (562)
.|+|+++.|++++++|.|.. ...+.+|.||..+....-||.+- ....|.||++++..+++++ .+|
T Consensus 198 GP~Ir~~~GD~v~v~~~N~l-~~~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~G 271 (770)
T 2r7e_B 198 GPYIRAEVEDNIMVTFRNQA-SRPYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDCK 271 (770)
T ss_dssp CCCCCCCSSSCEEEEEECCS-SSCCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSEE
T ss_pred CCeEEEEcCCEEEEEEEECC-CCCcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCCe
Confidence 38899999999999999997 67888999998766554468742 1246889999999999884 469
Q ss_pred eEEEEEeecCCCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhccccccccCCCCCCCCCCCCCCcceEEEEE
Q 036540 284 RYFMAARPFMDAPIPVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNYSSKLRSLNTPQYPANVPLRVDRHLFYT 363 (562)
Q Consensus 284 ~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~ 363 (562)
.||.|+|..... .. ..+..+.|.+......... ..+ ...++.+.+.
T Consensus 272 t~wYHsh~~~~~--q~-~~GL~G~liV~~~~~~~~~---~~~----------------------------~~~d~E~vl~ 317 (770)
T 2r7e_B 272 AWAYSSDVDLEK--DV-HSGLIGPLLVCHTNTLNPA---HGR----------------------------QVTVQEFALF 317 (770)
T ss_dssp EEEECCCSSSSH--HH-HTSCCEEEEEECSTTSCSS---SCC----------------------------CCSSEEEECC
T ss_pred eEEeeccCCcHH--HH-hCCceeeEEECCCcccccc---cCC----------------------------CccceEEEEE
Confidence 999999853210 00 1122333333322111000 000 0012222111
Q ss_pred ec-cCCCCCCCCCCCceeEEeecc--ccccc-CccccceeeeccccccccCCCCCCCCCcCcCCCCCCCCCcCCCCceee
Q 036540 364 IG-LGQNPCPSCQNGTQLTASLNN--ITFVM-PKIGLLQAHYFNISGVFRTDFPDRPPVPFNYTGAPLTANLGTSLGTRL 439 (562)
Q Consensus 364 ~~-~~~~~~~~~~~g~~~~~~~n~--~~~~~-p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (562)
+. ++. ++ .|.++. ..+.. |.. + .. ....|.. ....+.++|. .......
T Consensus 318 ~~~~de-------~~---swy~~~~~~~~~~~p~~--~-------~~-~d~~~~~-~~~~~~ING~-------~~~~~~~ 369 (770)
T 2r7e_B 318 FTIFDE-------TK---SWYFTENMERNCRAPCN--I-------QM-EDPTFKE-NYRFHAINGY-------IMDTLPG 369 (770)
T ss_dssp CCEECC-------SS---SSCTTGGGSSCSCCSSC--C-------CS-SSSSSTT-TSCEECTTSC-------TTTTCCC
T ss_pred EeecCc-------cc---cchhccchhhcccCccc--c-------cc-CCccccc-cCCccccCCc-------cCCCCCC
Confidence 10 000 00 010000 00000 000 0 00 0000000 0000111111 1112344
Q ss_pred EEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEecCc
Q 036540 440 SKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRADNP 519 (562)
Q Consensus 440 ~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnp 519 (562)
+.++.|++|+|.|.|.+. ..+.||||||||.|+|++.+ +.++||+.|+|++++.|+|++|+|
T Consensus 370 l~v~~Ge~vr~rliN~g~-~~~~H~fHlhGh~f~Vv~~d-----------------g~~~Dtv~l~Pg~~~~v~~~ad~p 431 (770)
T 2r7e_B 370 LVMAQDQRIRWYLLSMGS-NENIHSIHFSGHVFTVRKKE-----------------EYKMALYNLYPGVFETVEMLPSKA 431 (770)
T ss_dssp CCCCSSSCEEEECCCCCS-SSCCCEEEBSSCCEECCSSS-----------------CCEESEEECCTTCCCEEEECCSSC
T ss_pred eEEeCCCEEEEEEEeCCC-CcceEEEEEcCCEEEEEecC-----------------CceeeEEEECCCeEEEEEEEeCCC
Confidence 677899999999999762 24589999999999998763 238999999999999999999999
Q ss_pred eeEEEEeehhHhHhccceEEEEEe
Q 036540 520 GVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 520 G~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
|.|+||||+++|++.|||..|.|.
T Consensus 432 G~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 432 GIWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp BCCCBCCCSHHHHTTBCCCCCCBC
T ss_pred CceEEEeccccccccccccccccc
Confidence 999999999999999999999884
No 50
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.82 E-value=9.6e-19 Score=177.66 Aligned_cols=276 Identities=19% Similarity=0.194 Sum_probs=156.9
Q ss_pred CceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCC-CCeEEEEEcCcceEEEEeCCCccCceEEeEEEeCCCceE
Q 036540 194 DAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAAL-NDELFFAIAGHNMTVVEIDAVYTKPFTTQAILIAPGQTT 272 (562)
Q Consensus 194 ~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~-~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pgeR~ 272 (562)
..+++||+.- .|+|++++|+++++|+.|... ...|.+++|++.. .||.. +. . .|.||+++
T Consensus 54 ~~~~~ng~~p---------gP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~----~~~~~--~~--~--~i~pG~~~ 114 (336)
T 1oe1_A 54 QAMTFNGSMP---------GPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG----ALGGA--KL--T--NVNPGEQA 114 (336)
T ss_dssp EEEEETTBSS---------CCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS----GGGGG--GG--C--CBCTTEEE
T ss_pred EEEEECCccC---------CCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC----CCCCc--ce--E--EeCCCCEE
Confidence 5789999841 288999999999999999974 3678899998763 23431 21 1 38999999
Q ss_pred EEEEEeCCCCCeEEEEEeecCC-CCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhccccccccCCCCCCCCCC
Q 036540 273 NVLVKADQSPSRYFMAARPFMD-APIPVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNYSSKLRSLNTPQYPAN 351 (562)
Q Consensus 273 dv~v~~~~~~G~~~i~~~~~~~-~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~ 351 (562)
+..+++++ +|.||+|||.... ..... ....+.+.......... .+ .
T Consensus 115 ~y~f~~~~-~Gt~~yH~h~~~~~~~~~~--~Gl~G~liV~~~~~~~~-----------------------~~-------~ 161 (336)
T 1oe1_A 115 TLRFKADR-SGTFVYHCAPEGMVPWHVV--SGMSGTLMVLPRDGLKD-----------------------PQ-------G 161 (336)
T ss_dssp EEEEECCS-CEEEEEECCCTTCHHHHHH--TTCEEEEEEECTTCCBC-----------------------TT-------S
T ss_pred EEEEECCC-CeEEEEecCCCCchhHHHh--CCCeEEEEEecCcCCcc-----------------------cc-------c
Confidence 99999988 7999999995310 00001 12233333332111000 00 0
Q ss_pred CCCCcceEEEEEeccCCCCCCCCCCCceeEEeecccccccCccccceeeeccccccccCCCCCCCCCcCcCCCCCCCCCc
Q 036540 352 VPLRVDRHLFYTIGLGQNPCPSCQNGTQLTASLNNITFVMPKIGLLQAHYFNISGVFRTDFPDRPPVPFNYTGAPLTANL 431 (562)
Q Consensus 352 ~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (562)
.|...|+.+.+.+.-.... ...+|. +. +|..+....... . .... . ..+..+-.+|....
T Consensus 162 ~~~~~D~e~~l~~~D~~~~--~~~~g~-~~------~~~~~~~~~~~~----~-~~~~-~---~~~~~~liNG~~~~--- 220 (336)
T 1oe1_A 162 KPLHYDRAYTIGEFDLYIP--KGPDGK-YK------DYATLAESYGDT----V-QVMR-T---LTPSHIVFNGKVGA--- 220 (336)
T ss_dssp CBCCCSEEEEEEEEEECCC--BCTTSS-BC------CCSSTGGGHHHH----H-HHHH-T---TCCSEEEETTSTTT---
T ss_pred CcccCCceeEeeeeeeeec--cccCCc-ee------ecccccccccch----h-hHhh-c---CCCCEEEECCeecc---
Confidence 1112244433322100000 000000 00 000000000000 0 0000 0 00001111111000
Q ss_pred CCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCC--ccceeeecCCCE
Q 036540 432 GTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPP--ERNTVGVPTGGW 509 (562)
Q Consensus 432 ~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~--~rDTv~vpp~g~ 509 (562)
..+.+.+.++.|++++|+..+.+ ...+++++|||.|.|+. .|.+ ..|. +.||+.|++++.
T Consensus 221 --~~~~~~l~v~~GervRlin~~~~---~~~~~~~i~gh~~~Vi~--DG~~-----------~~p~~~~~dtv~i~pGer 282 (336)
T 1oe1_A 221 --LTGANALTAKVGETVLLIHSQAN---RDTRPHLIGGHGDWVWE--TGKF-----------ANPPQRDLETWFIRGGSA 282 (336)
T ss_dssp --TSGGGCEEEETTCEEEEEEEESS---SCBCEEETTCCEEEEET--TCCT-----------TSCCEEEESBCCBCTTEE
T ss_pred --CCCCcceEcCCCCEEEEEecCCC---CccceEEECCcCceEeC--CCcC-----------cCCccccceEEEECCCCc
Confidence 01135578899999998665543 34566667999999985 2321 2233 469999999999
Q ss_pred EEEEEEecCceeEEEEeehhHhH-hccceEEEEEecCCCCCC-CCCCCCCCCC
Q 036540 510 TAIRFRADNPGVWFMHCHLELHT-MWGLKMAFVVENGKSPDQ-SIVPPPKDLP 560 (562)
Q Consensus 510 ~~irf~~dnpG~w~~HCHil~H~-d~GM~~~~~V~~~~~~~~-~~~~~p~~~~ 560 (562)
+.+.+++++||.|+||||.+.|. +.||++.|.|+....+.. .....|..+|
T Consensus 283 ~dvlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~~~~~~~~~~~~~~~ 335 (336)
T 1oe1_A 283 GAALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWNDDLMKQIKAPAPIP 335 (336)
T ss_dssp EEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCCTTTCCCSSCSCCCC
T ss_pred EEEEEEcCCCceEEEEechhhccccCCCeEEEEECCCCChHHhccCCCCCCCC
Confidence 99999999999999999999986 999999999987665432 3455555555
No 51
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.81 E-value=2.7e-18 Score=180.71 Aligned_cols=236 Identities=14% Similarity=0.139 Sum_probs=154.5
Q ss_pred eEEEEEEEEEEEeecC-----------CceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceEEe-cCccccCCC
Q 036540 30 VKKYQFDVQVKNVSRL-----------CNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQ-YNMSIHW-HGLKQYRNG 96 (562)
Q Consensus 30 ~~~~~l~~~~~~~~~~-----------g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~siH~-HG~~~~~~~ 96 (562)
.+++.|.+..-....+ |...+.+++||+. .|+|+|++| ++|+||.|... ....+|+ ||.......
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~ 229 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVIS 229 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEE
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEE
Confidence 5677777776554433 3345789999997 599999999 99999999985 5678999 887654433
Q ss_pred CCCCCCc-----ccccccCCCCeEEEEEEeCCCCCceEEecCchhhcccc-e------------eEEEEcCCCCCCCCCC
Q 036540 97 WADGPAY-----ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLRATV-Y------------GAIVIMPKERTSFPFP 158 (562)
Q Consensus 97 ~~DGv~~-----~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~~Gl-~------------G~iiV~~~~~~~~~~~ 158 (562)
.||.+. +....|.|||++++.+++ .+.|+||++++......|+ . ..+-.........+
T Consensus 230 -~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-- 305 (451)
T 2uxt_A 230 -GDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-- 305 (451)
T ss_dssp -CSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred -eCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc--
Confidence 799642 456779999999999998 5689999998864432221 0 11111111100000
Q ss_pred CCCcceEEEEeeccccCHHHHHHhcccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEE
Q 036540 159 QPYQETNIILGEWWNSDVETIVNQGNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELF 238 (562)
Q Consensus 159 ~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~ 238 (562)
..+.+..+..+...............+ ..++|||+.+.. ..+.+.++.|++++|+|+|. ..|+
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~------~~~~iNg~~f~~------~~~~~~~~~G~~~~~~l~N~---~~HP 368 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLG------DDPGINGQLWDV------NRIDVTAQQGTWERWTVRAD---EPQA 368 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEEC------SSSSBTTBCCCT------TCCCEEEETTCEEEEEEEEE---EEEE
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEe------eEEEECCEeCCC------CCCcEEcCCCCEEEEEEECC---CCcC
Confidence 000000000000000000000000000 047899998732 23568999999999999998 5899
Q ss_pred EEEcCcceEEEEeCCCcc---CceEEeEEEeCCCceEEEEEEeCCCCCe----EEEEEee
Q 036540 239 FAIAGHNMTVVEIDAVYT---KPFTTQAILIAPGQTTNVLVKADQSPSR----YFMAARP 291 (562)
Q Consensus 239 ~~l~gh~~~via~DG~~~---~p~~~d~v~l~pgeR~dv~v~~~~~~G~----~~i~~~~ 291 (562)
||||||.|+|++.||.+. +|.++|++.| |+++.|.+++++ ||. |.+|||.
T Consensus 369 ~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dn-pg~~~g~w~~HCHi 425 (451)
T 2uxt_A 369 FHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQ-PSWAHFPFYFNSQT 425 (451)
T ss_dssp EEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCS-CCBTTBCEEEEESS
T ss_pred eEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCC-CCCCCCceEEeCCc
Confidence 999999999999999875 4789999999 999999999998 566 9999995
No 52
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.80 E-value=4e-19 Score=187.44 Aligned_cols=238 Identities=15% Similarity=0.109 Sum_probs=157.5
Q ss_pred CceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCC-CCeEEEEEcCcceEEEEeCCCccCceEEeEEEeCCCceE
Q 036540 194 DAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAAL-NDELFFAIAGHNMTVVEIDAVYTKPFTTQAILIAPGQTT 272 (562)
Q Consensus 194 ~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~-~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pgeR~ 272 (562)
..+++||+.- .|+++++.|++++||+.|... ...+++|+||+. ..||... +..|.||+++
T Consensus 49 ~~~~~ng~~p---------gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~ 109 (442)
T 2zoo_A 49 VFWSFGETVP---------GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTS 109 (442)
T ss_dssp EEEEETTBSS---------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEE
T ss_pred EEEEECCcCC---------CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEE
Confidence 5789999851 389999999999999999964 368999999975 3577632 2358999999
Q ss_pred EEEEEeCCCCCeEEEEEeecCCCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhccccccccCCCCCCCCCCC
Q 036540 273 NVLVKADQSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNYSSKLRSLNTPQYPANV 352 (562)
Q Consensus 273 dv~v~~~~~~G~~~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~ 352 (562)
++.+++++ +|.||+|||....... ......+.+.+..... .|..
T Consensus 110 ~y~f~~~~-~Gt~~yH~H~~~~~~~--~~~Gl~G~~iv~~~~~--------~~~~------------------------- 153 (442)
T 2zoo_A 110 TFNFKALN-PGLYIYHCATAPVGMH--IANGMYGLILVEPKEG--------LAPV------------------------- 153 (442)
T ss_dssp EEEEECCS-CEEEEEECCCSSHHHH--HHTTCEEEEEEECTTC--------CCCC-------------------------
T ss_pred EEEEEcCC-CeEEEEecCCCChHHH--HhCccEEEEEEeCCCC--------CCCC-------------------------
Confidence 99999988 7999999974211100 0012344444442111 0111
Q ss_pred CCCcceEEEEEeccCCCCCCCCC------------CCceeEEeecccccccCccccceeeeccccccccCCCCCCCCCcC
Q 036540 353 PLRVDRHLFYTIGLGQNPCPSCQ------------NGTQLTASLNNITFVMPKIGLLQAHYFNISGVFRTDFPDRPPVPF 420 (562)
Q Consensus 353 p~~~~~~~~~~~~~~~~~~~~~~------------~g~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~ 420 (562)
|+.+.+.+.-......... ....-.+.+||+.+..
T Consensus 154 ----d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~----------------------------- 200 (442)
T 2zoo_A 154 ----DREYYLVQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVGST----------------------------- 200 (442)
T ss_dssp ----SEEEEEEEEEECBSSCTTCCEEECBCHHHHHTTCCSEEEETTSTTTT-----------------------------
T ss_pred ----CceEEEEeeeeeccCcccccccccCChhHhccCCCCEEEECCCcCCC-----------------------------
Confidence 1111111100000000000 0000012233221100
Q ss_pred cCCCCCCCCCcCCCCceeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccc
Q 036540 421 NYTGAPLTANLGTSLGTRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERN 500 (562)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rD 500 (562)
...+.+.++.|++++|.|.|.+ ....|+||+||+.|.|++...+ ...|.+.|
T Consensus 201 --------------~~~~~l~v~~G~~vrlrliN~~--~~~~~~~~i~g~~~~vi~~DG~------------~~~p~~~~ 252 (442)
T 2zoo_A 201 --------------TDENSLTAKVGETVRLYIGNGG--PNLVSSFHVIGEIFDTVYVEGG------------SLKNHNVQ 252 (442)
T ss_dssp --------------SGGGCEEEETTCEEEEEEEEEE--SSCCEEEEEETCCBSEEEGGGS------------SCEECSBS
T ss_pred --------------CCCCceEeCCCCEEEEEEEeCC--CCCceeeEEcCCEEEEEecCCc------------cCCCccce
Confidence 0013467889999999999965 2468999999999999988532 12367899
Q ss_pred eeeecCCCEEEEEEEecCceeEEEEeehhHh-HhccceEEEEEecCCC
Q 036540 501 TVGVPTGGWTAIRFRADNPGVWFMHCHLELH-TMWGLKMAFVVENGKS 547 (562)
Q Consensus 501 Tv~vpp~g~~~irf~~dnpG~w~~HCHil~H-~d~GM~~~~~V~~~~~ 547 (562)
++.|.|++...|.|+++++|.|++|||.+.| .+.||++.+.|.....
T Consensus 253 ~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 253 TTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp EEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred EEEECCCeeEEEEEEcCCCCeEEEEecccccccccCceEEEEecCCCC
Confidence 9999999999999999999999999999999 5999999999986553
No 53
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.80 E-value=2e-18 Score=181.38 Aligned_cols=231 Identities=13% Similarity=0.167 Sum_probs=164.1
Q ss_pred ceEEEEEEEEEEEeec------------CCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceEEecCccccCC
Q 036540 29 AVKKYQFDVQVKNVSR------------LCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQ-YNMSIHWHGLKQYRN 95 (562)
Q Consensus 29 ~~~~~~l~~~~~~~~~------------~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~siH~HG~~~~~~ 95 (562)
..+++.|.+..-.... .|.....+++||+. .|.|+|++| ++|+||.|... ....+|++|......
T Consensus 145 ~~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi 222 (439)
T 2xu9_A 145 EAEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLI 222 (439)
T ss_dssp TSEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEE
T ss_pred CCCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEE
Confidence 4567777766543332 13456789999997 699999999 99999999985 467899999876543
Q ss_pred CCCCCCCc-----ccccccCCCCeEEEEEEeCCCCCceEEecCchhhc----ccc--------------ee--EEEEcCC
Q 036540 96 GWADGPAY-----ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLR----ATV--------------YG--AIVIMPK 150 (562)
Q Consensus 96 ~~~DGv~~-----~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~----~Gl--------------~G--~iiV~~~ 150 (562)
. .||.+. +....|.|||+++..+++ +++|.||++++..... .|| .. .|.+...
T Consensus 223 ~-~DG~~~~~p~~~~~l~l~pgeR~dv~v~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 300 (439)
T 2xu9_A 223 A-ADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKN 300 (439)
T ss_dssp E-ETTEEEEEEEEESCEEECTTCEEEEEEEC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSS
T ss_pred e-cCCCCCCCceEeceEEECCceeEEEEEEc-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCC
Confidence 3 799652 334669999999999998 5699999999743211 122 11 2222221
Q ss_pred CCCCCCCCCCC----------cceEEEEeeccccCHHHHHHhcccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEec
Q 036540 151 ERTSFPFPQPY----------QETNIILGEWWNSDVETIVNQGNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVES 220 (562)
Q Consensus 151 ~~~~~~~~~~~----------~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~ 220 (562)
. ...+.+... ....+.+.- +. .+..++|||+.+.. ..+.+.++.
T Consensus 301 ~-~~~~~p~~l~~~~~l~~~~~~r~~~l~~----------------~~---~g~~~~iNg~~~~~------~~~~~~~~~ 354 (439)
T 2xu9_A 301 P-KPLPLPKALSPFPTLPAPVVTRRLVLTE----------------DM---MAARFFINGQVFDH------RRVDLKGQA 354 (439)
T ss_dssp C-CCCCCCSCCCCCCCCCCCSEEEEEEEEE----------------EG---GGTEEEETTBCCCT------TCCCEEECT
T ss_pred C-ccccCcccCCCcccCCCCCcceEEEEEe----------------ec---cCceEeECCEECCC------CCCceecCC
Confidence 1 111111000 001111110 00 01368899998631 124589999
Q ss_pred CcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCcc-CceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEee
Q 036540 221 GKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYT-KPFTTQAILIAPGQTTNVLVKADQSPSRYFMAARP 291 (562)
Q Consensus 221 G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~-~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~ 291 (562)
|++++|+|.|.+ ...|+||||||.|+|++.+|... .|.++||+.|.||+++.|.+++++ ||.|.+|||-
T Consensus 355 g~~~~~~~~N~~-~~~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~adn-pG~w~~HCHi 424 (439)
T 2xu9_A 355 QTVEVWEVENQG-DMDHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLRE-KGRTVFHCHI 424 (439)
T ss_dssp TCEEEEEEEECS-SSCEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECCS-CEEEEEEESS
T ss_pred CCEEEEEEEcCC-CCCCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcCC-CCCEEEECCc
Confidence 999999999998 78999999999999999999876 688999999999999999999888 8999999995
No 54
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.74 E-value=2e-16 Score=169.53 Aligned_cols=236 Identities=16% Similarity=0.166 Sum_probs=154.2
Q ss_pred eeEEEEcCcCC---------CceEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCc----ccccccCCCCe
Q 036540 49 KPIVTVNGMFP---------GPTIYIREGDRVLINVTNHAQ-YNMSIHWHGLKQYRNGWADGPAY----ITQCPIKTGNS 114 (562)
Q Consensus 49 ~~~~~~Ng~~p---------gP~i~v~~Gd~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DGv~~----~t~~~i~pG~~ 114 (562)
.+.+++||+.. -|+|+|++|+++|+||.|... ....+|++|....... .||.+- +....|.|||+
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIE-VDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEe-cCCccccceeeeeEEEcccce
Confidence 56899999753 189999999999999999985 4678999888765433 799542 33456999999
Q ss_pred EEEEEEeCCCCCceEEecCchhh---c-ccceeEEEEcCCCCCCCCCCCCCcceEEEEeeccccC------HH----HHH
Q 036540 115 YTYDFNVTGQRGTLWWHAHILWL---R-ATVYGAIVIMPKERTSFPFPQPYQETNIILGEWWNSD------VE----TIV 180 (562)
Q Consensus 115 ~~y~~~~~~~~Gt~wyH~h~~~~---~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~------~~----~~~ 180 (562)
++..+++++.+|.||.+++.... . .|+..+++.........+..... .. ..+.+..... .. ...
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~~-~~~~~~~l~p~~~~~~p~~~~~~~~ 347 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-SG-TALNEANLIPLINPGAPGNPVPGGA 347 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-CS-CBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-cc-cccchhhcccCCcccCCCcccCCcc
Confidence 99999985557999999875421 1 34433444332211110100000 00 0000000000 00 000
Q ss_pred HhcccCCC-CCCCCCceeECCccCCCCCC---------------CCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCc
Q 036540 181 NQGNKLGL-PPQTSDAHTINGKSGPLFPC---------------SEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGH 244 (562)
Q Consensus 181 ~~~~~~g~-~~~~~~~~~iNG~~~~~~~~---------------~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh 244 (562)
........ .......++|||+.+..... .....+.+.++.|++++++++| ...|+||||||
T Consensus 348 ~~~~~l~~~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHGh 424 (521)
T 1v10_A 348 DINLNLRIGRNATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHGH 424 (521)
T ss_dssp SEEEECCEECCSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESSC
T ss_pred eEEEEEEEecCCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEccc
Confidence 00000000 00001257899998632100 0012367899999999999999 57899999999
Q ss_pred ceEEEEeCCCc----cCceEEeEEEe-CCCceEEEEEEeCCCCCeEEEEEee
Q 036540 245 NMTVVEIDAVY----TKPFTTQAILI-APGQTTNVLVKADQSPSRYFMAARP 291 (562)
Q Consensus 245 ~~~via~DG~~----~~p~~~d~v~l-~pgeR~dv~v~~~~~~G~~~i~~~~ 291 (562)
.|+|++.+|.. ..|.++||+.| .||+++.|.+++++ ||.|.+|||.
T Consensus 425 ~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDN-PG~W~~HCHi 475 (521)
T 1v10_A 425 NFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDN-PGPWFLHCHI 475 (521)
T ss_dssp CEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCS-CEEEEEEESC
T ss_pred eEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCC-CeeEEEeeCh
Confidence 99999999875 26899999999 79999999999998 7999999995
No 55
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.74 E-value=2.5e-16 Score=168.06 Aligned_cols=256 Identities=15% Similarity=0.139 Sum_probs=162.7
Q ss_pred EEEEEEEEEEeecCCc-----eeeEEEEcCcCC--------CceEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCC
Q 036540 32 KYQFDVQVKNVSRLCN-----SKPIVTVNGMFP--------GPTIYIREGDRVLINVTNHAQ-YNMSIHWHGLKQYRNGW 97 (562)
Q Consensus 32 ~~~l~~~~~~~~~~g~-----~~~~~~~Ng~~p--------gP~i~v~~Gd~v~i~~~N~l~-~~~siH~HG~~~~~~~~ 97 (562)
++.|.+..-....++. ....+++||+.. .|+|+|++|+++|+||.|... ....+|++|.......
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~- 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIE- 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEe-
Confidence 4566665544433332 356789999753 289999999999999999985 4678899887755433
Q ss_pred CCCCCc----ccccccCCCCeEEEEEEeCCCCCceEEecCchhh-------c-ccceeEEEEcCCCCCCCCCCCCCcceE
Q 036540 98 ADGPAY----ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWL-------R-ATVYGAIVIMPKERTSFPFPQPYQETN 165 (562)
Q Consensus 98 ~DGv~~----~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~-------~-~Gl~G~iiV~~~~~~~~~~~~~~~e~~ 165 (562)
.||.+- +....|.|||+++..+++++.+|.||.+++.... . .++..+++.........+......+.
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~- 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP- 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-
Confidence 798542 2345689999999999985558999999875311 1 23433444332211110100000000
Q ss_pred EEEeeccccCH--HHHH--------HhcccCCCCCCCCCceeECCccCCCCCC---------------CCCcceEEEEec
Q 036540 166 IILGEWWNSDV--ETIV--------NQGNKLGLPPQTSDAHTINGKSGPLFPC---------------SEKHTFAMEVES 220 (562)
Q Consensus 166 l~~~d~~~~~~--~~~~--------~~~~~~g~~~~~~~~~~iNG~~~~~~~~---------------~~~~~~~~~v~~ 220 (562)
..+.+...... .... ......... ..+..++|||+.+..-.. .......+.++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 00000000000 0000 000000000 001257899998632100 001235789999
Q ss_pred CcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCcc----CceEEeEEEe-CCCceEEEEEEeCCCCCeEEEEEee
Q 036540 221 GKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYT----KPFTTQAILI-APGQTTNVLVKADQSPSRYFMAARP 291 (562)
Q Consensus 221 G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~----~p~~~d~v~l-~pgeR~dv~v~~~~~~G~~~i~~~~ 291 (562)
|++++++++|......|+||||||.|+|++.+|... .|.++|++.| .||+++.|.+++++ ||.|.+|||.
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adn-PG~W~~HCHi 454 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDN-PGPWFFHCHI 454 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCS-CEEEEEEESS
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCC-CeeeeEecCc
Confidence 999999999644477999999999999999998752 6899999999 79999999999998 7999999995
No 56
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.72 E-value=3.6e-16 Score=164.63 Aligned_cols=241 Identities=14% Similarity=0.129 Sum_probs=160.2
Q ss_pred EEEEEEEEEEEeecCC-------------ceeeEEEEcCcCCCceEEEecCCEEEEEEEeCC-CCCceEEecCccccCCC
Q 036540 31 KKYQFDVQVKNVSRLC-------------NSKPIVTVNGMFPGPTIYIREGDRVLINVTNHA-QYNMSIHWHGLKQYRNG 96 (562)
Q Consensus 31 ~~~~l~~~~~~~~~~g-------------~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l-~~~~siH~HG~~~~~~~ 96 (562)
.+| |.+.......+| ...+.+++||+. .|+|.|++|+ |+||.|.. .....+|++|.......
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa 256 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVG 256 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEE
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEE
Confidence 455 666666554444 234789999997 5999999999 99999998 46688999988754433
Q ss_pred CCCCCCc-----ccccccCCCCeEEEEEEeCCCCCceEEecCchhhc---------ccceeEEEEcCCCCCCCC------
Q 036540 97 WADGPAY-----ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLR---------ATVYGAIVIMPKERTSFP------ 156 (562)
Q Consensus 97 ~~DGv~~-----~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~---------~Gl~G~iiV~~~~~~~~~------ 156 (562)
.||... +....|.|||+++..+++ .+.|+|...++..... .....-+.+.... ...|
T Consensus 257 -~DGg~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~lP~~l~~~ 333 (481)
T 3zx1_A 257 -TDGGLIEKTIYKEELFLSPASRVEVLIDA-PKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKEN-VELPKNLKIF 333 (481)
T ss_dssp -ETTEEEEEEEEESSEEECTTCEEEEEEEC-SSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCC-CCCCSCSCCC
T ss_pred -cCCCccCCceEeCeEEECCccEEEEEEEc-CCCcEEEEEEecccccCccccCCCCceeEEEEecCCCC-ccCCccccCC
Confidence 787321 345679999999999998 5677877766532210 0001112222111 1111
Q ss_pred --CCCCCcceEEEEeeccccCHHHHHHhcccCCCCC---CCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEec
Q 036540 157 --FPQPYQETNIILGEWWNSDVETIVNQGNKLGLPP---QTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNA 231 (562)
Q Consensus 157 --~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~---~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~ 231 (562)
.+..+....+.++.....-. .+...+... .....++|||+.+. ...+.++++.|++++|+|+|.
T Consensus 334 ~~~~~~~~~r~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~iNG~~~~------~~~~~~~~~~G~~v~w~l~N~ 402 (481)
T 3zx1_A 334 KPSEEPKEFKEIIMSEDHMQMH-----GMMGKSEGELKIALASMFLINRKSYD------LKRIDLSSKLGVVEDWIVINK 402 (481)
T ss_dssp CCCCCCCEEEEEEEEECCSTTT-----TGGGCCHHHHHHHHHTTEEETTBCCC------TTCCCEEEETTCCEEEEEEEC
T ss_pred CCCCCCCcEEEEEEeccchhcc-----cccccccccccccccceeEECCEeCC------CCCceEEeCCCCEEEEEEEcC
Confidence 11122233333332110000 000000000 00124899999862 133679999999999999997
Q ss_pred CCCCeEEEEEcCcceEEEEe--CCCcc---CceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEee
Q 036540 232 ALNDELFFAIAGHNMTVVEI--DAVYT---KPFTTQAILIAPGQTTNVLVKADQSPSRYFMAARP 291 (562)
Q Consensus 232 ~~~~~~~~~l~gh~~~via~--DG~~~---~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~ 291 (562)
+ ...|+||||||.|+|++. +|... ++.++|++.|.||+++.|.+++++ ||.|.+|||.
T Consensus 403 ~-~~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~-pG~w~~HCHi 465 (481)
T 3zx1_A 403 S-HMDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDF-KGLRMYHCHI 465 (481)
T ss_dssp S-SSCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCCS-CEEEEEEESS
T ss_pred C-CCceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcCC-CeeEEEEcCC
Confidence 7 789999999999999999 99865 467999999999999999999987 7999999995
No 57
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.68 E-value=3.7e-15 Score=157.98 Aligned_cols=241 Identities=18% Similarity=0.184 Sum_probs=153.0
Q ss_pred eeeEEEEcCcC---------CCceEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCc----ccccccCCCC
Q 036540 48 SKPIVTVNGMF---------PGPTIYIREGDRVLINVTNHAQ-YNMSIHWHGLKQYRNGWADGPAY----ITQCPIKTGN 113 (562)
Q Consensus 48 ~~~~~~~Ng~~---------pgP~i~v~~Gd~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DGv~~----~t~~~i~pG~ 113 (562)
..+.+++||+- +-|.|+|++|+++|+||.|... ....+|++|....... .||.+- +....|.|||
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIE-TDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-eCCcccCCEEeeeEEEcCce
Confidence 45789999962 3479999999999999999874 5678888887754433 798532 2345699999
Q ss_pred eEEEEEEeCCCCCceEEecCchhhc----ccceeEEEEcCCCCCCCCCCCCCc-ceEEEEeeccccCHHHH-HHhcccCC
Q 036540 114 SYTYDFNVTGQRGTLWWHAHILWLR----ATVYGAIVIMPKERTSFPFPQPYQ-ETNIILGEWWNSDVETI-VNQGNKLG 187 (562)
Q Consensus 114 ~~~y~~~~~~~~Gt~wyH~h~~~~~----~Gl~G~iiV~~~~~~~~~~~~~~~-e~~l~~~d~~~~~~~~~-~~~~~~~g 187 (562)
+++..+++++.+|.||..+...... .|...+++.........+...... ... .+.+......... .......+
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~ 324 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPHQG 324 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSSTT
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccCCC
Confidence 9999999865679999997643111 233234443322211111100000 000 0000000000000 00000000
Q ss_pred CC--------CCCCCceeECCccCCCCCC-----------C----CCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCc
Q 036540 188 LP--------PQTSDAHTINGKSGPLFPC-----------S----EKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGH 244 (562)
Q Consensus 188 ~~--------~~~~~~~~iNG~~~~~~~~-----------~----~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh 244 (562)
.. ...+..++|||+.+..... + .....++.++.|++++|.|.|......|+||||||
T Consensus 325 ~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh 404 (495)
T 3t6v_A 325 GADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGH 404 (495)
T ss_dssp CSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTC
T ss_pred CCcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecCC
Confidence 00 0001357899987631100 0 01235789999999999998433367999999999
Q ss_pred ceEEEEeCCCcc----CceEEeEEEeCC-CceEEEEEEeCCCCCeEEEEEee
Q 036540 245 NMTVVEIDAVYT----KPFTTQAILIAP-GQTTNVLVKADQSPSRYFMAARP 291 (562)
Q Consensus 245 ~~~via~DG~~~----~p~~~d~v~l~p-geR~dv~v~~~~~~G~~~i~~~~ 291 (562)
.|+|++.+|... .|...|++.|.+ |+.+.+.+++++ ||.|.+|||.
T Consensus 405 ~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adn-PG~W~~HCHi 455 (495)
T 3t6v_A 405 DFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDN-PGPWFLHCHI 455 (495)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCS-CEEEEEEESC
T ss_pred cEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCC-CeeEEEEecc
Confidence 999999988653 689999999997 999999999998 8999999995
No 58
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.67 E-value=6.5e-15 Score=157.94 Aligned_cols=225 Identities=12% Similarity=0.113 Sum_probs=149.9
Q ss_pred eeEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCc----ccccccCCCCeEEEEEEeCC
Q 036540 49 KPIVTVNGMFPGPTIYIREGDRVLINVTNHAQ-YNMSIHWHGLKQYRNGWADGPAY----ITQCPIKTGNSYTYDFNVTG 123 (562)
Q Consensus 49 ~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DGv~~----~t~~~i~pG~~~~y~~~~~~ 123 (562)
...+++||+. .|+|+|++|+++|+||.|... ....+|.+|....... .||.+- +....|.|||+++..+++++
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVE-IDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEe-ccCcCccccEeceEEECccceEEEEEEcCC
Confidence 5689999997 599999999999999999984 4677888887654433 788542 23456999999999999843
Q ss_pred C-CCceEEecCchhhc-------ccceeEEEEcCCCCCCCCCC-------C-C---------------CcceEEEEeecc
Q 036540 124 Q-RGTLWWHAHILWLR-------ATVYGAIVIMPKERTSFPFP-------Q-P---------------YQETNIILGEWW 172 (562)
Q Consensus 124 ~-~Gt~wyH~h~~~~~-------~Gl~G~iiV~~~~~~~~~~~-------~-~---------------~~e~~l~~~d~~ 172 (562)
+ .|.||......... ....+..+++-......+.+ . . ..+..+.+.--
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~- 323 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVV- 323 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEE-
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEE-
Confidence 3 57899987654221 01122222221111110000 0 0 00000000000
Q ss_pred ccCHHHHHHhcccCCCCCCCCCceeECCccCCCCCC--------------C----CCcceEEEEecCcEEEEEEEecCCC
Q 036540 173 NSDVETIVNQGNKLGLPPQTSDAHTINGKSGPLFPC--------------S----EKHTFAMEVESGKTYLLRIVNAALN 234 (562)
Q Consensus 173 ~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~--------------~----~~~~~~~~v~~G~~~rlRliN~~~~ 234 (562)
....+ .....++|||+.+..... . ......+.++.|++++|.|.|.+ .
T Consensus 324 ----------~~~~~---~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~-~ 389 (534)
T 1zpu_A 324 ----------MDNLK---NGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQD-T 389 (534)
T ss_dssp ----------EEECT---TSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECS-S
T ss_pred ----------eeccC---CceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCC-C
Confidence 00000 012357899987632100 0 00134689999999999999987 6
Q ss_pred CeEEEEEcCcceEEEEeCCC--------------------ccCceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEee
Q 036540 235 DELFFAIAGHNMTVVEIDAV--------------------YTKPFTTQAILIAPGQTTNVLVKADQSPSRYFMAARP 291 (562)
Q Consensus 235 ~~~~~~l~gh~~~via~DG~--------------------~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~ 291 (562)
..|+||||||.|+|++.++. ...|.++||+.|.||+.+.|.+++++ ||.|.+|||-
T Consensus 390 ~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aDN-PG~W~~HCHi 465 (534)
T 1zpu_A 390 GTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADN-PGVWFFHCHI 465 (534)
T ss_dssp SCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECCS-CEEEEEEECC
T ss_pred CCCCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeCC-CeeEEEEeCc
Confidence 79999999999999998853 12478999999999999999999998 8999999995
No 59
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.66 E-value=6.2e-15 Score=156.24 Aligned_cols=240 Identities=13% Similarity=0.141 Sum_probs=151.6
Q ss_pred eeeEEEEcCcC--------CCceEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCc----ccccccCCCCe
Q 036540 48 SKPIVTVNGMF--------PGPTIYIREGDRVLINVTNHAQ-YNMSIHWHGLKQYRNGWADGPAY----ITQCPIKTGNS 114 (562)
Q Consensus 48 ~~~~~~~Ng~~--------pgP~i~v~~Gd~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DGv~~----~t~~~i~pG~~ 114 (562)
..+.+++||+- +-|.|+|++|+++|+||.|... ....+|++|....... .||.+- +....|.|||+
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIE-VDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-ECCcccCceEeeeEEECCCcE
Confidence 45789999973 3479999999999999999984 5678899887755433 788542 23456999999
Q ss_pred EEEEEEeCCCCCceEEecCchhh--c--ccceeEEEEcCCCCCCCCCCCCCcceEEEEeeccccCH------H-HHH---
Q 036540 115 YTYDFNVTGQRGTLWWHAHILWL--R--ATVYGAIVIMPKERTSFPFPQPYQETNIILGEWWNSDV------E-TIV--- 180 (562)
Q Consensus 115 ~~y~~~~~~~~Gt~wyH~h~~~~--~--~Gl~G~iiV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~------~-~~~--- 180 (562)
++..+++++.+|.||..+..... . .+..-+++.........+......... .+.+...... . ...
T Consensus 244 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~~~ 322 (499)
T 3pxl_A 244 YSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSVK-PLNEVDLHPLVSTPVPGAPSSGGV 322 (499)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCSS-BCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCCc-ccccccccccccccCCCcccCCCC
Confidence 99999986567999998764211 1 222223333322111111000000000 0000000000 0 000
Q ss_pred HhcccCCCCCCCCCceeECCccCCCCCC-----------C----CCcceEEEEecCcEEEEEEEec--CCCCeEEEEEcC
Q 036540 181 NQGNKLGLPPQTSDAHTINGKSGPLFPC-----------S----EKHTFAMEVESGKTYLLRIVNA--ALNDELFFAIAG 243 (562)
Q Consensus 181 ~~~~~~g~~~~~~~~~~iNG~~~~~~~~-----------~----~~~~~~~~v~~G~~~rlRliN~--~~~~~~~~~l~g 243 (562)
+....... ...+..++|||+.+..... + ......+.++.|++|+|.|.|. .....|+|||||
T Consensus 323 d~~~~l~~-~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHG 401 (499)
T 3pxl_A 323 DKAINMAF-NFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHG 401 (499)
T ss_dssp SEEEECCE-EECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETT
T ss_pred cEEEEEEE-EecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecC
Confidence 00000000 0012357899987631100 0 0123578999999999999942 225689999999
Q ss_pred cceEEEEeCCCcc----CceEEeEEEeCC---CceEEEEEEeCCCCCeEEEEEee
Q 036540 244 HNMTVVEIDAVYT----KPFTTQAILIAP---GQTTNVLVKADQSPSRYFMAARP 291 (562)
Q Consensus 244 h~~~via~DG~~~----~p~~~d~v~l~p---geR~dv~v~~~~~~G~~~i~~~~ 291 (562)
|.|+|++.+|... .|...|++.|.+ |+.+.+.+++++ ||.|.+|||.
T Consensus 402 h~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adn-PG~W~~HCHi 455 (499)
T 3pxl_A 402 HTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNN-PGPWFLHCHI 455 (499)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCS-CEEEEEEESS
T ss_pred CcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCC-CceEEEEeCC
Confidence 9999999888643 689999999986 999999999998 8999999995
No 60
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.66 E-value=5.4e-15 Score=159.70 Aligned_cols=211 Identities=15% Similarity=0.154 Sum_probs=140.0
Q ss_pred eEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCc----ccccccCCCCeEEEEEEe-CCCCCceEEecCch
Q 036540 62 TIYIREGDRVLINVTNHAQ-YNMSIHWHGLKQYRNGWADGPAY----ITQCPIKTGNSYTYDFNV-TGQRGTLWWHAHIL 135 (562)
Q Consensus 62 ~i~v~~Gd~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DGv~~----~t~~~i~pG~~~~y~~~~-~~~~Gt~wyH~h~~ 135 (562)
+|+|++|+++|+||.|... ....+|++|....... .||.+- +....|.|||+++..+++ ++.+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE-ADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEE-ECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999985 4577888887755433 788532 334569999999999998 44589999998865
Q ss_pred hhc---ccceeEEEEcCCCCCCCC---CCC-----------------------------CCcceEEEEeeccccCHHHHH
Q 036540 136 WLR---ATVYGAIVIMPKERTSFP---FPQ-----------------------------PYQETNIILGEWWNSDVETIV 180 (562)
Q Consensus 136 ~~~---~Gl~G~iiV~~~~~~~~~---~~~-----------------------------~~~e~~l~~~d~~~~~~~~~~ 180 (562)
... ....+.|..........+ .+. .++.+.+.+..
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~---------- 353 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQ---------- 353 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEE----------
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEEEEEee----------
Confidence 311 111233333322210000 000 00000000000
Q ss_pred HhcccCCCCCCCCCceeECCccCCCC----------------C----------CCC-----------CcceEEEEecCcE
Q 036540 181 NQGNKLGLPPQTSDAHTINGKSGPLF----------------P----------CSE-----------KHTFAMEVESGKT 223 (562)
Q Consensus 181 ~~~~~~g~~~~~~~~~~iNG~~~~~~----------------~----------~~~-----------~~~~~~~v~~G~~ 223 (562)
+ .......++|||+.+..- + |.+ .....+.++.|++
T Consensus 354 ------~-~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~ 426 (552)
T 1aoz_A 354 ------N-VINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEV 426 (552)
T ss_dssp ------E-EETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCE
T ss_pred ------c-cCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCE
Confidence 0 000012467888754210 0 000 0124589999999
Q ss_pred EEEEEEecCC-----CCeEEEEEcCcceEEEEe-CCCc----------cCceEEeEEEeCCCceEEEEEEeCCCCCeEEE
Q 036540 224 YLLRIVNAAL-----NDELFFAIAGHNMTVVEI-DAVY----------TKPFTTQAILIAPGQTTNVLVKADQSPSRYFM 287 (562)
Q Consensus 224 ~rlRliN~~~-----~~~~~~~l~gh~~~via~-DG~~----------~~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i 287 (562)
++|.|.|.+. ...|+||||||.|+|++. +|.+ ..|..+||+.|.+|+.+.|.+++++ ||.|.+
T Consensus 427 v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDN-PG~W~~ 505 (552)
T 1aoz_A 427 VDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADN-PGVWAF 505 (552)
T ss_dssp EEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCS-CEEEEE
T ss_pred EEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcCC-CeEEEE
Confidence 9999999874 347999999999999998 4553 2688999999999999999999998 899999
Q ss_pred EEee
Q 036540 288 AARP 291 (562)
Q Consensus 288 ~~~~ 291 (562)
|||-
T Consensus 506 HCHi 509 (552)
T 1aoz_A 506 HCHI 509 (552)
T ss_dssp EESS
T ss_pred Eeee
Confidence 9995
No 61
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.64 E-value=6e-15 Score=155.29 Aligned_cols=249 Identities=14% Similarity=0.123 Sum_probs=157.3
Q ss_pred EEEEEEEEEEEeecCC--------------ceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceEEe-cCccccC
Q 036540 31 KKYQFDVQVKNVSRLC--------------NSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQ-YNMSIHW-HGLKQYR 94 (562)
Q Consensus 31 ~~~~l~~~~~~~~~~g--------------~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~siH~-HG~~~~~ 94 (562)
.++.|.+.......+| ...+.+++||+. .|.+.+ +|+++|+||.|... ....+++ +|.....
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 4667777765543333 234689999996 488876 67899999999984 5677887 6765433
Q ss_pred CCCCCCCCc-----ccccccCCCCeEEEEEEeCCCCCceEEecCchhhcccc-----e---eEEEEcC-----CCCCC--
Q 036540 95 NGWADGPAY-----ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLRATV-----Y---GAIVIMP-----KERTS-- 154 (562)
Q Consensus 95 ~~~~DGv~~-----~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~~Gl-----~---G~iiV~~-----~~~~~-- 154 (562)
.. .||... ++...|.|||+++..+++ .+.++|+.-+..... .|+ . -.+-|.+ ....+
T Consensus 229 Ia-~DG~~l~~P~~~~~l~l~pGeR~dvlv~~-~~~~~~~l~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 305 (488)
T 3od3_A 229 IA-SDGGLLPEPVKVSELPVLMGERFEVLVEV-NDNKPFDLVTLPVSQ-MGMAIAPFDKPHPVMRIQPIAISASGALPDT 305 (488)
T ss_dssp EE-ETTEEEEEEEEESCEEECTTCEEEEEEEE-CTTCCEEEEECCCSS-TTTTSTTTTSCEEEEEEEEEEEECCCCCCSC
T ss_pred EE-eCCCcccCccEeceEEECCCCEEEEEEEe-CCCceEEEEEeccCC-CCcccccccCccceeEecccccCCCCCCCcc
Confidence 22 788432 345679999999999998 567778776543211 111 0 0122221 11100
Q ss_pred -CCC---CC----CCcceEEEEeecccc-CHHHHHH----hccc------------CCCC--------CCCCCceeECCc
Q 036540 155 -FPF---PQ----PYQETNIILGEWWNS-DVETIVN----QGNK------------LGLP--------PQTSDAHTINGK 201 (562)
Q Consensus 155 -~~~---~~----~~~e~~l~~~d~~~~-~~~~~~~----~~~~------------~g~~--------~~~~~~~~iNG~ 201 (562)
.++ +. ..+++.+.+...... ....+.. ..+. .|.. ......++|||+
T Consensus 306 L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~ 385 (488)
T 3od3_A 306 LSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQ 385 (488)
T ss_dssp CCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTB
T ss_pred cccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCe
Confidence 001 11 112333433210000 0000000 0000 0100 000123799999
Q ss_pred cCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccC---ceEEeEEEeCCCceEEEEEEe
Q 036540 202 SGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTK---PFTTQAILIAPGQTTNVLVKA 278 (562)
Q Consensus 202 ~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~---p~~~d~v~l~pgeR~dv~v~~ 278 (562)
.+.. ..+.++++.|+++||+|+|.+....|+||||||.|+|++.||.... +.++|+|.|. |+++.|++++
T Consensus 386 ~~~~------~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f 458 (488)
T 3od3_A 386 AFDM------NKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKF 458 (488)
T ss_dssp CCCT------TCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECB
T ss_pred eCCC------CCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEe
Confidence 8731 2366899999999999999997779999999999999999998764 3579999999 9999999999
Q ss_pred CCC---CCeEEEEEee
Q 036540 279 DQS---PSRYFMAARP 291 (562)
Q Consensus 279 ~~~---~G~~~i~~~~ 291 (562)
++. +|.|.+|||.
T Consensus 459 ~~~~~~~G~~m~HCH~ 474 (488)
T 3od3_A 459 NHDAPKEHAYMAHCHL 474 (488)
T ss_dssp CSCCCGGGCEEEEESS
T ss_pred ccCCCCCCCEEEeCCc
Confidence 762 5799999995
No 62
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.63 E-value=3.9e-14 Score=152.92 Aligned_cols=241 Identities=10% Similarity=0.093 Sum_probs=149.2
Q ss_pred eeeEEEEcCcCC--------CceEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCc----ccccccCCCCe
Q 036540 48 SKPIVTVNGMFP--------GPTIYIREGDRVLINVTNHAQ-YNMSIHWHGLKQYRNGWADGPAY----ITQCPIKTGNS 114 (562)
Q Consensus 48 ~~~~~~~Ng~~p--------gP~i~v~~Gd~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DGv~~----~t~~~i~pG~~ 114 (562)
....+++||+.. -|+|+|++|+++|+||.|... ....+|++|....... .||.+. +....|.|||+
T Consensus 194 ~~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR 272 (559)
T 2q9o_A 194 FSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIA-ADMVPVNAMTVDSLFLAVGQR 272 (559)
T ss_dssp CBSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCE
T ss_pred ccceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEe-cCCcccCceEeCeEEEccEEE
Confidence 356789999873 379999999999999999985 4578999988755433 788652 33456999999
Q ss_pred EEEEEEeCCCCCceEEecCc--hhh---c-cc-ceeEEEEcCCCCCCCCCCC----CC----cceEE-EEeeccccCHH-
Q 036540 115 YTYDFNVTGQRGTLWWHAHI--LWL---R-AT-VYGAIVIMPKERTSFPFPQ----PY----QETNI-ILGEWWNSDVE- 177 (562)
Q Consensus 115 ~~y~~~~~~~~Gt~wyH~h~--~~~---~-~G-l~G~iiV~~~~~~~~~~~~----~~----~e~~l-~~~d~~~~~~~- 177 (562)
++..+++++.+|.||..... ... . .. ..+.|....... ..|... .+ .+..+ -+.........
T Consensus 273 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~-~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~ 351 (559)
T 2q9o_A 273 YDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPG-GLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSF 351 (559)
T ss_dssp EEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCC-SCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTC
T ss_pred EEEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCC-CCCCCCCCcCCCcccccccccccCCCCCCCCccc
Confidence 99999985568999998765 211 1 11 123333332211 101000 00 00000 00000000000
Q ss_pred --HHHHhcc-cCCCCCCCCCceeECCccCCCCCCC-------------CCcceEEEEecCcEEEEEEEecCC----CCeE
Q 036540 178 --TIVNQGN-KLGLPPQTSDAHTINGKSGPLFPCS-------------EKHTFAMEVESGKTYLLRIVNAAL----NDEL 237 (562)
Q Consensus 178 --~~~~~~~-~~g~~~~~~~~~~iNG~~~~~~~~~-------------~~~~~~~~v~~G~~~rlRliN~~~----~~~~ 237 (562)
....... ...........++|||+.+...... ......+.++.++.+++.++|... ...|
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~H 431 (559)
T 2q9o_A 352 VKRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPH 431 (559)
T ss_dssp CCCGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCE
T ss_pred ccceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCC
Confidence 0000000 0000000123688999986321000 001235788877777777777654 6799
Q ss_pred EEEEcCcceEEEEeCC---------Cc------------cCceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEee
Q 036540 238 FFAIAGHNMTVVEIDA---------VY------------TKPFTTQAILIAPGQTTNVLVKADQSPSRYFMAARP 291 (562)
Q Consensus 238 ~~~l~gh~~~via~DG---------~~------------~~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~ 291 (562)
+||||||.|+|++.++ .. ..|.++||+.|.+++++.|.+++++ ||.|.+|||-
T Consensus 432 P~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adN-PG~W~~HCHi 505 (559)
T 2q9o_A 432 PMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDN-PGAWLFHCHI 505 (559)
T ss_dssp EEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCS-CEEEEEEECC
T ss_pred cEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCC-CeeEEEEecc
Confidence 9999999999999986 22 1477999999999999999999998 8999999995
No 63
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.63 E-value=1.8e-14 Score=155.49 Aligned_cols=233 Identities=14% Similarity=0.085 Sum_probs=145.8
Q ss_pred eeeEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceEEecCc-------cccCCCCCCCCCc-----cc------ccc
Q 036540 48 SKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQ-YNMSIHWHGL-------KQYRNGWADGPAY-----IT------QCP 108 (562)
Q Consensus 48 ~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~siH~HG~-------~~~~~~~~DGv~~-----~t------~~~ 108 (562)
..+.+++||+. .|.+.|++| ++|+||.|... +...+++.|. ...... .||.+. +. ...
T Consensus 253 ~gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa-~DG~~l~~P~~~~~~~~~~~l~ 329 (612)
T 2g23_A 253 FGPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG-SDGGLLPRPVPVDFDDTLPVLS 329 (612)
T ss_dssp CCSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE-ETTEEEEEEEEECSSSSSSSEE
T ss_pred cCCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEE-eCCeEccCCEEecccCcccEEE
Confidence 35678999997 599999999 99999999984 5677888664 121112 788532 22 467
Q ss_pred cCCCCeEEEEEEeCCCCCc-eEEecCchhhccc-----------ceeEEEEcCCC-CCCCCCCCCC-------------c
Q 036540 109 IKTGNSYTYDFNVTGQRGT-LWWHAHILWLRAT-----------VYGAIVIMPKE-RTSFPFPQPY-------------Q 162 (562)
Q Consensus 109 i~pG~~~~y~~~~~~~~Gt-~wyH~h~~~~~~G-----------l~G~iiV~~~~-~~~~~~~~~~-------------~ 162 (562)
|.|||+++.-+++.+.+|+ ++..........| ..--|.|.... ......+... .
T Consensus 330 l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~ 409 (612)
T 2g23_A 330 AAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHG 409 (612)
T ss_dssp ECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCE
T ss_pred ECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccc
Confidence 9999999999998555675 6655443211111 11113444322 1111111100 0
Q ss_pred ceEEEEe------------ecccc---CHHHHH---HhcccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEE
Q 036540 163 ETNIILG------------EWWNS---DVETIV---NQGNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTY 224 (562)
Q Consensus 163 e~~l~~~------------d~~~~---~~~~~~---~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~ 224 (562)
...+++. -|... ....+. ...............++|||+.+. ..+.++++.|+++
T Consensus 410 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~-------~~~~~~v~~G~~v 482 (612)
T 2g23_A 410 HRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFN-------DGLGFTIGEGTHE 482 (612)
T ss_dssp EEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTT-------SCCCEEEETTCEE
T ss_pred eeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCC-------CCCceEecCCCEE
Confidence 0112221 00000 000000 000000000001135889999772 3467999999999
Q ss_pred EEEEEecCCCCeEEEEEcCcceEEEEeCCC------------------------cc---CceEEeEEEeCCCceEEEEEE
Q 036540 225 LLRIVNAALNDELFFAIAGHNMTVVEIDAV------------------------YT---KPFTTQAILIAPGQTTNVLVK 277 (562)
Q Consensus 225 rlRliN~~~~~~~~~~l~gh~~~via~DG~------------------------~~---~p~~~d~v~l~pgeR~dv~v~ 277 (562)
+|+|+|.+ ...|+||||||.|+|++.+|. .. ++.++|++.|.||+++.|.++
T Consensus 483 ~w~l~N~~-~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~ 561 (612)
T 2g23_A 483 QWTFLNLS-PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGK 561 (612)
T ss_dssp EEEEEECS-SSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEE
T ss_pred EEEEEeCC-CCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEE
Confidence 99999998 789999999999999987531 11 234799999999999999999
Q ss_pred eCCCCCeEEEEEee
Q 036540 278 ADQSPSRYFMAARP 291 (562)
Q Consensus 278 ~~~~~G~~~i~~~~ 291 (562)
++..||.|.+|||.
T Consensus 562 ~~~~pG~w~~HCHi 575 (612)
T 2g23_A 562 FDGAYGRFMYHCHL 575 (612)
T ss_dssp CCSCCEEEEEEESS
T ss_pred eCCCCccEEEEeCc
Confidence 99448999999995
No 64
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.61 E-value=1.2e-14 Score=152.54 Aligned_cols=227 Identities=15% Similarity=0.120 Sum_probs=151.5
Q ss_pred EEEEEEEEEEEeec-------------CCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceEEe--cC---cc
Q 036540 31 KKYQFDVQVKNVSR-------------LCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQ-YNMSIHW--HG---LK 91 (562)
Q Consensus 31 ~~~~l~~~~~~~~~-------------~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~siH~--HG---~~ 91 (562)
+++.|.+..-.... .|...+.+++||+. .|+|+|++| ++|+||.|... ....+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 56777766554332 13345789999997 599999999 99999999985 5678999 77 44
Q ss_pred ccCCCCCCCCCc-----ccccccCCCCeEEEEEEeCCCCCceEEecCchhhccc----c----------eeE--EEEcCC
Q 036540 92 QYRNGWADGPAY-----ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLRAT----V----------YGA--IVIMPK 150 (562)
Q Consensus 92 ~~~~~~~DGv~~-----~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~~G----l----------~G~--iiV~~~ 150 (562)
..... .||.+. +....|.|||+++..++++ .|.||..++......| + ... |.+...
T Consensus 216 ~~via-~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MRLIA-VDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EEEEE-ETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EEEEE-eCCCccCCceEeceEEECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 33222 788542 2345699999999999983 5788988764321100 1 111 222111
Q ss_pred CCC--CCCC---C----CCCcceEEEEeeccccCHHHHHHhcccCCCCCCCCCceeECCccCCCCCCCCCcceEEE-Eec
Q 036540 151 ERT--SFPF---P----QPYQETNIILGEWWNSDVETIVNQGNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAME-VES 220 (562)
Q Consensus 151 ~~~--~~~~---~----~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~-v~~ 220 (562)
... +..+ + ....+..+.+.. + ...++|||+.+.. ..+.+. ++.
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l~~----------------~-----~~~~~iNg~~~~~------~~p~~~~~~~ 345 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFALSL----------------S-----GMQWTINGMFWNA------SNPLFEHVSV 345 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEEEE----------------E-----TTEEEETTBCCCT------TCTTCCCEEE
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEEeC----------------C-----CceeeECCCcCCC------CCCceeccCC
Confidence 110 0000 0 001111111110 0 0248899998732 224567 999
Q ss_pred CcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCcc------------Cc---eEEeEEEeCCCceEEEEEEeC---C-C
Q 036540 221 GKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYT------------KP---FTTQAILIAPGQTTNVLVKAD---Q-S 281 (562)
Q Consensus 221 G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~------------~p---~~~d~v~l~pgeR~dv~v~~~---~-~ 281 (562)
|++++|+|.|.+....|+||||||.|+|++.+|... .| .++||+.+.||+++.|.+++. . .
T Consensus 346 g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adn 425 (448)
T 3aw5_A 346 EGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQ 425 (448)
T ss_dssp CEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTC
T ss_pred CCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCC
Confidence 999999999998567899999999999999999764 23 589999999999999996664 2 2
Q ss_pred CCeEEEEEee
Q 036540 282 PSRYFMAARP 291 (562)
Q Consensus 282 ~G~~~i~~~~ 291 (562)
| |.+|||-
T Consensus 426 p--w~~HCHi 433 (448)
T 3aw5_A 426 L--FPFHCHN 433 (448)
T ss_dssp E--EEEEESS
T ss_pred c--EEEEcCC
Confidence 4 9999995
No 65
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.58 E-value=6e-15 Score=157.82 Aligned_cols=217 Identities=12% Similarity=0.080 Sum_probs=140.5
Q ss_pred eeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCC-CceEEecCc-cccCCCCCCCCCc-----ccccccCCCCeEEEEEE
Q 036540 48 SKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQY-NMSIHWHGL-KQYRNGWADGPAY-----ITQCPIKTGNSYTYDFN 120 (562)
Q Consensus 48 ~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~-~~siH~HG~-~~~~~~~~DGv~~-----~t~~~i~pG~~~~y~~~ 120 (562)
....+++||+. .|.|.++.| ++|+||.|.... ...+|++|. ...... .||... +....|.|||+++..++
T Consensus 229 ~~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via-~DG~~~~~P~~~~~l~l~pgeR~dvlv~ 305 (513)
T 2wsd_A 229 CGETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIG-SDGGLLPRSVKLNSFSLAPAERYDIIID 305 (513)
T ss_dssp CCSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEE-ETTEEEEEEEEESEEEECTTCEEEEEEE
T ss_pred ccceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEc-cCCCcccCceEeCeEEECCeeeEEEEEE
Confidence 34789999997 599999885 999999999854 578998876 443322 798432 34467999999999999
Q ss_pred eCCCCCceEEe-cCch--hhc-ccc-eeEEEEcCCC--CC--CCCCCCC------------CcceEEEEeeccccCHHHH
Q 036540 121 VTGQRGTLWWH-AHIL--WLR-ATV-YGAIVIMPKE--RT--SFPFPQP------------YQETNIILGEWWNSDVETI 179 (562)
Q Consensus 121 ~~~~~Gt~wyH-~h~~--~~~-~Gl-~G~iiV~~~~--~~--~~~~~~~------------~~e~~l~~~d~~~~~~~~~ 179 (562)
+++.+|.++.- .-.. ... ... ...+...... .. ....+.. ..+..+.+...
T Consensus 306 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~-------- 377 (513)
T 2wsd_A 306 FTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGT-------- 377 (513)
T ss_dssp CGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEE--------
T ss_pred CCCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEee--------
Confidence 84446873332 1110 000 011 1222222111 00 0001100 00111111110
Q ss_pred HHhcccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCC-----
Q 036540 180 VNQGNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAV----- 254 (562)
Q Consensus 180 ~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~----- 254 (562)
. .......++|||+.+. ....+.++.|++++|+|.|.+ ...|+||||||.|+|++.++.
T Consensus 378 ----~----~~~g~~~~~iNg~~~~-------~~~~~~~~~g~~~~w~l~N~~-~~~HP~HlHG~~F~Vl~~~~~~~~~~ 441 (513)
T 2wsd_A 378 ----Q----DEYGRPVLLLNNKRWH-------DPVTETPKVGTTEIWSIINPT-RGTHPIHLHLVSFRVLDRRPFDIARY 441 (513)
T ss_dssp ----E----CTTSCEEEEETTBCTT-------SCCCBCCBTTCEEEEEEEECS-SSCEEEEESSCCEEEEEEEEBCHHHH
T ss_pred ----c----CCCCCceEeECCccCC-------CcccEecCCCCEEEEEEEcCC-CCCcCEeEeCceEEEEEecCcccccc
Confidence 0 0000124679999862 224568999999999999998 679999999999999998751
Q ss_pred ----------c------cCceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEee
Q 036540 255 ----------Y------TKPFTTQAILIAPGQTTNVLVKADQSPSRYFMAARP 291 (562)
Q Consensus 255 ----------~------~~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~ 291 (562)
+ -++.++|++.|.||+++.|.+++++.||.|.+|||.
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHi 494 (513)
T 2wsd_A 442 QESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHA 494 (513)
T ss_dssp HHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESC
T ss_pred cccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCC
Confidence 0 023589999999999999999995448999999995
No 66
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.57 E-value=4.3e-14 Score=151.32 Aligned_cols=243 Identities=13% Similarity=0.091 Sum_probs=149.0
Q ss_pred EEEEEEEEEEEeecCC-----------ceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceEEecC-------cc
Q 036540 31 KKYQFDVQVKNVSRLC-----------NSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQ-YNMSIHWHG-------LK 91 (562)
Q Consensus 31 ~~~~l~~~~~~~~~~g-----------~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~siH~HG-------~~ 91 (562)
.++.|.+.......+| ...+.+++||+. .|.|.|+.| ++|+||.|... ....++++| ..
T Consensus 172 ~d~~l~l~d~~~~~~g~~~~~~~~~~~~~gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~ 249 (534)
T 3abg_A 172 FDIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLP 249 (534)
T ss_dssp HSCCEEEEEECBCSSSCBCCCTTCSSCCCCSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCC
T ss_pred ceEEEEEeeeeecCCCceeccCCCCccccCceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCcc
Confidence 3455666655443333 235689999996 699999985 99999999985 456888876 33
Q ss_pred ccCCCCCCCCCc-----ccccccCCCCeEEEEEEeCCCCC-ceEEecCchhh--------cccceeEEEEcCCCCC----
Q 036540 92 QYRNGWADGPAY-----ITQCPIKTGNSYTYDFNVTGQRG-TLWWHAHILWL--------RATVYGAIVIMPKERT---- 153 (562)
Q Consensus 92 ~~~~~~~DGv~~-----~t~~~i~pG~~~~y~~~~~~~~G-t~wyH~h~~~~--------~~Gl~G~iiV~~~~~~---- 153 (562)
..... .||... +....|.|||+++..+++++.+| +||........ .....+.+-.......
T Consensus 250 ~~vIa-~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~ 328 (534)
T 3abg_A 250 FKVIA-SDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD 328 (534)
T ss_dssp EEEEE-ETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC
T ss_pred EEEEE-eCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC
Confidence 22222 788421 34567999999999999855578 58776532100 0011122222211110
Q ss_pred CCCCCCCCcceEEEEeeccccCHHHHHHhcccCCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCcEEEEEEEecCC
Q 036540 154 SFPFPQPYQETNIILGEWWNSDVETIVNQGNKLGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGKTYLLRIVNAAL 233 (562)
Q Consensus 154 ~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~ 233 (562)
....+....... ..+. .... ......+ .....++|||+.+... .....+.++.|++++|.|.|.+.
T Consensus 329 ~~~~P~~L~~~~--~p~~-~~~~----~~~~~~~---~~~~~w~iNG~~f~~~----~~p~l~~v~~G~~~~w~i~N~~~ 394 (534)
T 3abg_A 329 TSVVPANLRDVP--FPSP-TTNT----PRQFRFG---RTGPTWTINGVAFADV----QNRLLANVPVGTVERWELINAGN 394 (534)
T ss_dssp CCCCCCCCCCCS--CCCC-CCCC----CEEEECS---CCCSTTCCCCBTTBCT----TSCCCCEECTTCEEEEEEEECSS
T ss_pred CCCCccccccCC--CCCC-cccc----ceEEEEe---ccCceeEECCcccCCC----CCcceeeccCCCEEEEEEEcCCC
Confidence 000000000000 0000 0000 0000000 0113578999986311 11134689999999999999986
Q ss_pred CCeEEEEEcCcceEEEEe-CCC---cc---CceEEeEEEeCCCceEEEEEE-eCCCCCeEEEEEee
Q 036540 234 NDELFFAIAGHNMTVVEI-DAV---YT---KPFTTQAILIAPGQTTNVLVK-ADQSPSRYFMAARP 291 (562)
Q Consensus 234 ~~~~~~~l~gh~~~via~-DG~---~~---~p~~~d~v~l~pgeR~dv~v~-~~~~~G~~~i~~~~ 291 (562)
...|+||||||.|+|++. +|. .. +..++|++.|.||+++.|.+. +++ ||.|.+|||.
T Consensus 395 ~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~adn-pG~w~~HCHi 459 (534)
T 3abg_A 395 GWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPF-PGVYMFHCHN 459 (534)
T ss_dssp SCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCSC-CEEEEEEESC
T ss_pred CCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECCC-CccEEEecCh
Confidence 679999999999999998 663 11 125799999999999999998 666 8999999995
No 67
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.54 E-value=5.5e-14 Score=140.71 Aligned_cols=218 Identities=15% Similarity=0.164 Sum_probs=152.0
Q ss_pred ceEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccCceEEeEEEeCCCceEEEEEEeCC------------
Q 036540 213 TFAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTKPFTTQAILIAPGQTTNVLVKADQ------------ 280 (562)
Q Consensus 213 ~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~------------ 280 (562)
.|+|+++.|++++++|.|.. ....++|.||..+.- +.||.+. ..-.|.||+++...+++..
T Consensus 41 GP~i~~~~Gd~v~v~~~N~l-~~~~siH~HG~~~~~-~~dG~~~-----~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~ 113 (313)
T 3tas_A 41 GPLIELNEGDTLHIEFENTM-DVPVSLHVHGLDYEI-SSDGTKQ-----SRSDVEPGGTRTYTWRTHVPGRRADGTWRAG 113 (313)
T ss_dssp CCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCSTT-----TTCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECC-CCCccEeecCCcCCc-cCCCCcc-----ccCCcCCCCEEEEEEEeccCCccccccccCC
Confidence 38999999999999999998 678899999976542 5688753 1224789999998887653
Q ss_pred CCCeEEEEEeecCCCCCCC-CCcceEEEEEecCCCCCCCCCCCCCCCCCCchhhccccccccCCCCCCCCCCCCCCcceE
Q 036540 281 SPSRYFMAARPFMDAPIPV-DNKTVTAILQYKGIPNTVLPTLPSLPAPSDTNFALNYSSKLRSLNTPQYPANVPLRVDRH 359 (562)
Q Consensus 281 ~~G~~~i~~~~~~~~~~~~-~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~ 359 (562)
..|.||.|||......... -.....+.|....... ...|+.
T Consensus 114 ~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~--------------------------------------~~~d~e 155 (313)
T 3tas_A 114 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD--------------------------------------VLPDRT 155 (313)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--------------------------------------BCCSEE
T ss_pred CceEEEEeecCcccccchhhhhccccCceEeecccc--------------------------------------cccccc
Confidence 2489999998522110000 0012334333331100 012454
Q ss_pred EEEEeccCCCCCCCCCCCceeEEeecccccccCccccceeeeccccccccCCCCCCCCCcCcCCCCCCCCCcCCCCceee
Q 036540 360 LFYTIGLGQNPCPSCQNGTQLTASLNNITFVMPKIGLLQAHYFNISGVFRTDFPDRPPVPFNYTGAPLTANLGTSLGTRL 439 (562)
Q Consensus 360 ~~~~~~~~~~~~~~~~~g~~~~~~~n~~~~~~p~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (562)
+.+.++ .|++|+..+. ..+.
T Consensus 156 ~~l~~~---------------d~t~Ng~~~~---------------------------------------------~~~~ 175 (313)
T 3tas_A 156 HTIVFN---------------DMTINNRPAH---------------------------------------------TGPD 175 (313)
T ss_dssp EEEEEE---------------TTEETTCCTT---------------------------------------------CCCC
T ss_pred ceeecc---------------chhcccCCcc---------------------------------------------cccc
Confidence 444332 1556654221 1223
Q ss_pred EEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEe---
Q 036540 440 SKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRA--- 516 (562)
Q Consensus 440 ~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~--- 516 (562)
+.++.|++|+|.|.|.+ .+.||||||||.|+|+..+... .....+.++||+.|.|++...+++.+
T Consensus 176 l~v~~Ge~vr~~liN~g---~~~hpfHlHGh~F~v~~~~~~~---------~~~~~~~~~Dtv~l~Pger~~v~v~a~~~ 243 (313)
T 3tas_A 176 FEATVGDRVEFVMITHG---EYYHTFHLHGHRWADNRTGMLT---------GPDDPSQVIDNKICGPADSFGFQVIAGEG 243 (313)
T ss_dssp EEEETTCEEEEEEEEES---SCCEEEEETTCCEESSTTSSCC---------STTCCCCEESEEEECTTCEEEEEEETTTT
T ss_pred cccccCCEEEEEEeccc---ccceeeeecCCeeEEEEECCcc---------CCCCCCeeeeEEEeCCCcceEEEEEeccC
Confidence 67789999999999976 6789999999999998765221 12245789999999999988777764
Q ss_pred cCceeEEEEeehhHhHhccceEEEEEecCCC
Q 036540 517 DNPGVWFMHCHLELHTMWGLKMAFVVENGKS 547 (562)
Q Consensus 517 dnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 547 (562)
+|||.|+|||||++|++.|||..|+|++++.
T Consensus 244 ~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~ 274 (313)
T 3tas_A 244 VGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 274 (313)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTC
T ss_pred CCCEeEEEEeCChHHHHCCCeEEEEEECCCC
Confidence 6899999999999999999999999987654
No 68
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.53 E-value=4.2e-15 Score=123.98 Aligned_cols=89 Identities=20% Similarity=0.183 Sum_probs=69.7
Q ss_pred cCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCC--CCCCCCCcccccccCCCCeEEEEEEeCCCCCceEEecCc
Q 036540 57 MFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRN--GWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI 134 (562)
Q Consensus 57 ~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~--~~~DGv~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~ 134 (562)
++++|+|++++||+|+ ++|.+..++++||||...+.. ..+||.+ .++..|.||++++|+|++++++|+||||||.
T Consensus 15 ~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~~ 91 (105)
T 3cvb_A 15 QFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCAP 91 (105)
T ss_dssp CEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECTT
T ss_pred EEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeCC
Confidence 5678999999999975 679998999999999876431 0123322 2457899999999999865689999999993
Q ss_pred hhhcccceeEEEEcC
Q 036540 135 LWLRATVYGAIVIMP 149 (562)
Q Consensus 135 ~~~~~Gl~G~iiV~~ 149 (562)
+ ..+||.|.|+|++
T Consensus 92 H-~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 92 H-RGAGMVGKITVEG 105 (105)
T ss_dssp T-GGGTCEEEEEECC
T ss_pred c-hhcCCEEEEEEcC
Confidence 2 2479999999974
No 69
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.47 E-value=9.1e-12 Score=133.66 Aligned_cols=238 Identities=12% Similarity=0.031 Sum_probs=146.2
Q ss_pred eeEEEEcCcCC----------------CceEEEecCCEEEEEEEeCCC-CCceEEecCccccCCCCCCCCCc----cccc
Q 036540 49 KPIVTVNGMFP----------------GPTIYIREGDRVLINVTNHAQ-YNMSIHWHGLKQYRNGWADGPAY----ITQC 107 (562)
Q Consensus 49 ~~~~~~Ng~~p----------------gP~i~v~~Gd~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DGv~~----~t~~ 107 (562)
....++||+.. .++|.|++|+++|+||.|... ....++.+|....... .||.+- +...
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa-~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIA-NDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEE-eCCccCCceEeeEE
Confidence 46789999742 379999999999999999985 4568888887765433 798642 2345
Q ss_pred ccCCCCeEEEEEEeCCCCCceEEecCchh-----hcccceeEEEEcCCCCCCCCCCCCCcceE-EEEee--ccccC--HH
Q 036540 108 PIKTGNSYTYDFNVTGQRGTLWWHAHILW-----LRATVYGAIVIMPKERTSFPFPQPYQETN-IILGE--WWNSD--VE 177 (562)
Q Consensus 108 ~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~-----~~~Gl~G~iiV~~~~~~~~~~~~~~~e~~-l~~~d--~~~~~--~~ 177 (562)
.|.|||+++..+++++.+|.||..+.... ...+..-+|+.........|.... .+.. ..+.+ ..... ..
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~-~~~~~~~~~~~~~~L~P~~~~ 382 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVG-TTPRGTCEDEPVASLVPHLAL 382 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCC-CCCCCCSCCSCGGGCCBSSCC
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCC-CCccchhhcccccccccCCCC
Confidence 68999999999999667899999987542 111222233433222111111000 0000 00000 00000 00
Q ss_pred HHHHhc-----ccCCCCCCCCCceeECCccCCCCCCC--------C-----CcceEEEE----ecCcEEEEEEEecC-CC
Q 036540 178 TIVNQG-----NKLGLPPQTSDAHTINGKSGPLFPCS--------E-----KHTFAMEV----ESGKTYLLRIVNAA-LN 234 (562)
Q Consensus 178 ~~~~~~-----~~~g~~~~~~~~~~iNG~~~~~~~~~--------~-----~~~~~~~v----~~G~~~rlRliN~~-~~ 234 (562)
...... ...+ ....-.+.|||..+...... + ...-.+.+ +.|++|.|.|-|.+ ..
T Consensus 383 ~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~ 460 (580)
T 3sqr_A 383 DVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGFG 460 (580)
T ss_dssp BCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSSC
T ss_pred CCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCccc
Confidence 000000 0000 00112477899875210000 0 01123344 45999999999987 23
Q ss_pred CeEEEEEcCcceEEEEeCCC------------ccCceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEee
Q 036540 235 DELFFAIAGHNMTVVEIDAV------------YTKPFTTQAILIAPGQTTNVLVKADQSPSRYFMAARP 291 (562)
Q Consensus 235 ~~~~~~l~gh~~~via~DG~------------~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~ 291 (562)
..|+||||||.|.|++.+.. +..|...|++.+.|++.+.|.+++++ ||.|.+|||-
T Consensus 461 ~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adN-PG~W~~HCHi 528 (580)
T 3sqr_A 461 IWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDN-PGSWLLHCHI 528 (580)
T ss_dssp CCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCS-CEEEEEEECS
T ss_pred cceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCC-CeeeEEEECc
Confidence 68999999999999998432 12578999999999999999999998 8999999994
No 70
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.41 E-value=7.8e-12 Score=137.35 Aligned_cols=231 Identities=13% Similarity=0.036 Sum_probs=135.1
Q ss_pred eeeEEEEcCcCCCceEEEecCCEEEEEEEeCCC-CCceEEecCc---------cccCCCCCCCCC-----------cccc
Q 036540 48 SKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQ-YNMSIHWHGL---------KQYRNGWADGPA-----------YITQ 106 (562)
Q Consensus 48 ~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~-~~~siH~HG~---------~~~~~~~~DGv~-----------~~t~ 106 (562)
.....++||+. .|.+.++. .++|+||.|... ....+.+-|. .+.. .||.. .++.
T Consensus 253 ~gd~~~vNG~~-~p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa---~DG~~l~~Pv~v~~p~~~~~ 327 (612)
T 3gyr_A 253 FGPYTTVNGRI-WPYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG---SDGGLLPRPVPVDFDDTLPV 327 (612)
T ss_dssp CCSEEEETTEE-SCEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE---ETTEEEEEEEEECSSSSSSS
T ss_pred cCceeeecCCc-cceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEE---eCCCccccceeccCcccccE
Confidence 35678999997 59998875 589999999974 4455555443 2222 68832 1234
Q ss_pred cccCCCCeEEEEEEeCCCCCceEEecCchhhc--------ccc--ee--EEEEcCCCC-CCCCCCC------------CC
Q 036540 107 CPIKTGNSYTYDFNVTGQRGTLWWHAHILWLR--------ATV--YG--AIVIMPKER-TSFPFPQ------------PY 161 (562)
Q Consensus 107 ~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~--------~Gl--~G--~iiV~~~~~-~~~~~~~------------~~ 161 (562)
..|.||||++.-+++.+..|.+|+-....... .+. .. .+.+..... .....+. ..
T Consensus 328 l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 407 (612)
T 3gyr_A 328 LSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIP 407 (612)
T ss_dssp EEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSC
T ss_pred EEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccccccc
Confidence 67999999999999865666666543221110 011 01 112221111 0000000 00
Q ss_pred cce-EEEEeeccccCHH-------------HHHHhccc-----CCCCCCCCCceeECCccCCCCCCCCCcceEEEEecCc
Q 036540 162 QET-NIILGEWWNSDVE-------------TIVNQGNK-----LGLPPQTSDAHTINGKSGPLFPCSEKHTFAMEVESGK 222 (562)
Q Consensus 162 ~e~-~l~~~d~~~~~~~-------------~~~~~~~~-----~g~~~~~~~~~~iNG~~~~~~~~~~~~~~~~~v~~G~ 222 (562)
... ...+......... ........ ..........+.+|++.+. ....+.++.|+
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-------~~~~~~~~~g~ 480 (612)
T 3gyr_A 408 HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTFN-------DGLGFTIGEGT 480 (612)
T ss_dssp CEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECSTT-------SCCCEEEETTC
T ss_pred cccccccccccccccccccccccccccccccccccccccceeeeccCCCccccccccCccCC-------CCcceEeCCCC
Confidence 001 1111100000000 00000000 0000111234667777542 23568999999
Q ss_pred EEEEEEEecCCCCeEEEEEcCcceEEEEeCCCcc---------------------------CceEEeEEEeCCCceEEEE
Q 036540 223 TYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYT---------------------------KPFTTQAILIAPGQTTNVL 275 (562)
Q Consensus 223 ~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~---------------------------~p~~~d~v~l~pgeR~dv~ 275 (562)
+++|.|+|.+ ...|+||||||.|+|++.+|... ++.++|++.|.+|+.+.|.
T Consensus 481 ~~~w~i~N~~-~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~ 559 (612)
T 3gyr_A 481 HEQWTFLNLS-PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVM 559 (612)
T ss_dssp EEEEEEEECS-SSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEE
T ss_pred EEEEEEEcCC-CCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEE
Confidence 9999999998 68999999999999998766421 2335899999999999999
Q ss_pred EEeCCCCCeEEEEEee
Q 036540 276 VKADQSPSRYFMAARP 291 (562)
Q Consensus 276 v~~~~~~G~~~i~~~~ 291 (562)
+++...||.|.+|||-
T Consensus 560 ~rfadnpG~w~~HCHi 575 (612)
T 3gyr_A 560 GKFDGAYGRFMYHCHL 575 (612)
T ss_dssp EECCSCCEEEEEEESS
T ss_pred EEeCCCCcceEEcCCC
Confidence 9965558999999995
No 71
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.41 E-value=1.4e-12 Score=109.91 Aligned_cols=105 Identities=16% Similarity=0.185 Sum_probs=80.3
Q ss_pred EEEEEEEEEEEe-----ecCCceeeE-EEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcc
Q 036540 31 KKYQFDVQVKNV-----SRLCNSKPI-VTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYI 104 (562)
Q Consensus 31 ~~~~l~~~~~~~-----~~~g~~~~~-~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~ 104 (562)
+.|.+.+..... ..+|..... ..+|++++++.|++++||+|+++++|.... +||+.... .|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~--- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV--- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE---
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc---
Confidence 456666665443 234555444 589999988999999999999999999865 55555432 222
Q ss_pred cccccCCCCeEEEEEEeCCCCCceEEecCchhhcccceeEEEEcC
Q 036540 105 TQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLRATVYGAIVIMP 149 (562)
Q Consensus 105 t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~~Gl~G~iiV~~ 149 (562)
+..+.||++++|.|++ +++|+||||||.+....+|.|.|+|.+
T Consensus 70 -~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 70 -QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp -EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred -eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHHCEEEEEEeC
Confidence 3679999999999997 799999999998876656999999964
No 72
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.36 E-value=2.5e-12 Score=114.20 Aligned_cols=99 Identities=19% Similarity=0.191 Sum_probs=71.3
Q ss_pred CCceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCC------CCccc-ccccCCCC--eE
Q 036540 45 LCNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADG------PAYIT-QCPIKTGN--SY 115 (562)
Q Consensus 45 ~g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG------v~~~t-~~~i~pG~--~~ 115 (562)
-+.....+.++|. ++|+|+|++||+|+++++|... ...|.+.+.....++.+. ..+.. ...|.||+ +.
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEE
Confidence 3555556777777 5799999999999999999743 335665555443332221 00000 02689999 99
Q ss_pred EEEEEeCCCCCceEEecCchhhc-ccceeEEEEc
Q 036540 116 TYDFNVTGQRGTLWWHAHILWLR-ATVYGAIVIM 148 (562)
Q Consensus 116 ~y~~~~~~~~Gt~wyH~h~~~~~-~Gl~G~iiV~ 148 (562)
+|+|++ ++|+||||||..++. +||+|.|+|+
T Consensus 123 t~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 123 DFTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 999985 899999999987777 8999999985
No 73
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.31 E-value=5.7e-12 Score=127.44 Aligned_cols=101 Identities=23% Similarity=0.341 Sum_probs=82.3
Q ss_pred EEEcCcC--CCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCC--------cccccccCCCCeEEEEEEe
Q 036540 52 VTVNGMF--PGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPA--------YITQCPIKTGNSYTYDFNV 121 (562)
Q Consensus 52 ~~~Ng~~--pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~--------~~t~~~i~pG~~~~y~~~~ 121 (562)
|+|||+. ..|.|++++||+|+|+|.|.....+.+|+||...... .+|.. ......|.||++++|.|++
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEE
Confidence 6899986 3589999999999999999999999999999875433 33321 1233569999999999996
Q ss_pred --CCCCCceEEecCchhhc-ccceeEEEEcCCCCCC
Q 036540 122 --TGQRGTLWWHAHILWLR-ATVYGAIVIMPKERTS 154 (562)
Q Consensus 122 --~~~~Gt~wyH~h~~~~~-~Gl~G~iiV~~~~~~~ 154 (562)
.+.+|+|+||||..... .||.|.|+|.++....
T Consensus 276 ~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~~~ 311 (343)
T 3cg8_A 276 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTI 311 (343)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSCC
T ss_pred CCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCCCC
Confidence 36899999999987766 8999999999876543
No 74
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.21 E-value=3.3e-11 Score=128.21 Aligned_cols=95 Identities=21% Similarity=0.290 Sum_probs=74.6
Q ss_pred CceeeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCC
Q 036540 46 CNSKPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQR 125 (562)
Q Consensus 46 g~~~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~~~ 125 (562)
+....+|++|+++++|+|++++||+|+++|+|.+...-. +||+.+.. .|+ ...+.||++++|+|++ +++
T Consensus 498 ~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta-~~p 566 (595)
T 1fwx_A 498 KVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV----AMEIGPQMTSSVTFVA-ANP 566 (595)
T ss_dssp EEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE----EEEECTTCEEEEEEEC-CSC
T ss_pred ccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc----ceeeCCCCeEEEEEEC-CCC
Confidence 466789999999999999999999999999998653211 35665432 232 2679999999999998 899
Q ss_pred CceEEecCch-hhc-ccceeEEEEcCCC
Q 036540 126 GTLWWHAHIL-WLR-ATVYGAIVIMPKE 151 (562)
Q Consensus 126 Gt~wyH~h~~-~~~-~Gl~G~iiV~~~~ 151 (562)
|+||||||.. +.. .||.|.|+|++++
T Consensus 567 GtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 567 GVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp EEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred EEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 9999999932 222 6999999998753
No 75
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.15 E-value=3.9e-11 Score=105.06 Aligned_cols=95 Identities=15% Similarity=0.155 Sum_probs=71.1
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCC-CCCeeecCCCeEEE--------EecC-CCCCCCCCCCCCCCCCCCccceeeecCC
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVE-SHPFHLHGYNFFVV--------GSGI-GNFDPKKDPAKFNLVDPPERNTVGVPTG 507 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~-~HP~HlHG~~F~vl--------~~g~-g~~~~~~~~~~~~~~~p~~rDTv~vpp~ 507 (562)
..+.++.|++|+|++.|.+ .. .|.||+|+....+. ..+. ..|.+.. ....++||..|.|+
T Consensus 35 ~~i~v~~G~~V~~~~~N~~---~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~-------~~~~~~~t~~l~pG 104 (139)
T 2aan_A 35 TELTVSAGQTVTIRFKNNS---AVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD-------KSNIIAESPLANGN 104 (139)
T ss_dssp SEEEECTTCEEEEEEECCC---SSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC-------CTTEEEECCCBCTT
T ss_pred CeEEECCCCEEEEEEEeCC---CCCCeeEEEeccccccchhhhhhhhcccccccccCcc-------cccccccccccCCC
Confidence 3467899999999999965 45 79999998643110 0000 0111110 12357899999999
Q ss_pred CEEEEEEEecCceeEEEEeehhHhHhccceEEEEEe
Q 036540 508 GWTAIRFRADNPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 508 g~~~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
....|.|.+++||.|.||||+..|.+ ||+..|.|+
T Consensus 105 et~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 105 ETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred CEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 99999999999999999999999999 999999874
No 76
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.14 E-value=2e-10 Score=95.23 Aligned_cols=79 Identities=20% Similarity=0.296 Sum_probs=62.4
Q ss_pred cCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCCCceEEecCc
Q 036540 55 NGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI 134 (562)
Q Consensus 55 Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~ 134 (562)
+.++..+.|++++||+|++ +|....++++|+++. .||.....+..+.||++++|+| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 4455568999999999655 699888899998852 3554434445689999999888 579999999998
Q ss_pred hhhcccceeEEEEc
Q 036540 135 LWLRATVYGAIVIM 148 (562)
Q Consensus 135 ~~~~~Gl~G~iiV~ 148 (562)
+. ||.|.|+|+
T Consensus 95 H~---gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP---FMRGKVVVE 105 (105)
T ss_dssp CT---TCEEEEEEC
T ss_pred CC---CCEEEEEEC
Confidence 75 999999985
No 77
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.06 E-value=1.4e-10 Score=96.32 Aligned_cols=85 Identities=18% Similarity=0.167 Sum_probs=64.8
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEe-
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRA- 516 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~- 516 (562)
+.+.++.|++|+|+ |.. ...|+||+||..+... .+ . . ......++..|+|++...++|.+
T Consensus 19 ~~i~v~~Gd~V~~~--N~~---~~~H~v~~~~~~~~~~-~g--~----------~-~~~~~~~~~~i~pG~~~~~~f~~~ 79 (105)
T 3cvb_A 19 ANVTVHPGDTVKWV--NNK---LPPHNILFDDKQVPGA-SK--E----------L-ADKLSHSQLMFSPGESYEITFSSD 79 (105)
T ss_dssp SEEEECTTEEEEEE--ECS---SCCEEEEECTTSSGGG-CH--H----------H-HHHHCEEEEECSTTCEEEEEECTT
T ss_pred CEEEEcCCCEEEEE--ECC---CCCCeEEEeCCCCCcc-cc--c----------c-cccccccccccCCCCeEEEEEecC
Confidence 44788999999874 653 5689999999765321 00 0 0 00112578899999999999998
Q ss_pred cCceeEEEEeehhHhHhccceEEEEEe
Q 036540 517 DNPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 517 dnpG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
+.||.|.|||| .|...||+..|.|+
T Consensus 80 ~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 80 FPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp SCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 79999999999 79999999999986
No 78
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.95 E-value=2e-09 Score=89.42 Aligned_cols=83 Identities=16% Similarity=0.155 Sum_probs=60.8
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCC----cccccccCCCCeEEEEEEeCCCCCceEEecCchh
Q 036540 61 PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPA----YITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILW 136 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~----~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~ 136 (562)
+.|++++||+|++ +|....++++|.|+...+. .+|.. ..+...+.||++++|+|++++++|+|||||| ..
T Consensus 20 ~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-~H 93 (106)
T 2gim_A 20 AKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-PH 93 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT-TT
T ss_pred CEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC-Ch
Confidence 8999999999755 5887778888888765421 12210 0112458999999999975468999999999 22
Q ss_pred hcccceeEEEEcC
Q 036540 137 LRATVYGAIVIMP 149 (562)
Q Consensus 137 ~~~Gl~G~iiV~~ 149 (562)
..+||.|.|+|++
T Consensus 94 ~~~GM~G~i~V~~ 106 (106)
T 2gim_A 94 RGAGMVGKITVAG 106 (106)
T ss_dssp GGGTCEEEEEECC
T ss_pred hhcCcEEEEEEcC
Confidence 3379999999963
No 79
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.89 E-value=7e-09 Score=90.61 Aligned_cols=91 Identities=11% Similarity=0.114 Sum_probs=65.7
Q ss_pred cCCCceEEEecCCEEEEEEEeCCCC-CceEEecCcccc-----------C---CCC-CCCCCc--ccccccCCCCeEEEE
Q 036540 57 MFPGPTIYIREGDRVLINVTNHAQY-NMSIHWHGLKQY-----------R---NGW-ADGPAY--ITQCPIKTGNSYTYD 118 (562)
Q Consensus 57 ~~pgP~i~v~~Gd~v~i~~~N~l~~-~~siH~HG~~~~-----------~---~~~-~DGv~~--~t~~~i~pG~~~~y~ 118 (562)
+|--+.|+|++||+|+++|+|.... .++++.++.... . ..+ .++.+. .....|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 4434799999999999999999877 888888874310 0 000 001010 011348999999999
Q ss_pred EEeCCCCCceEEecCchhhcccceeEEEEc
Q 036540 119 FNVTGQRGTLWWHAHILWLRATVYGAIVIM 148 (562)
Q Consensus 119 ~~~~~~~Gt~wyH~h~~~~~~Gl~G~iiV~ 148 (562)
|++ +++|+|+||||......||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 997 68999999999876545999999984
No 80
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.79 E-value=1.5e-08 Score=83.93 Aligned_cols=85 Identities=16% Similarity=0.161 Sum_probs=62.2
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEe-
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRA- 516 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~- 516 (562)
..+.++.|++|+|+ |.+ ...|+||+|+..+.. .+. .. ......|++.+.|+....+.|.+
T Consensus 20 ~~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~~~-----------~~g--~~-~~~~~~~~~~~~pG~~~~~~f~~~ 80 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNK---VPPHNVVFDAALNPA-----------KSA--DL-AKSLSHKQLLMSPGQSTSTTFPAD 80 (106)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCCCBEECSSSSTT-----------CCH--HH-HHHHCBCSCCCSTTCEEEEECCTT
T ss_pred CEEEECCCCEEEEE--ECC---CCCceEEEeCCCCcc-----------ccc--cc-chhccccceeeCCCCEEEEEEecC
Confidence 34688999999986 643 468999999753310 000 00 00011467889999999998888
Q ss_pred cCceeEEEEeehhHhHhccceEEEEEe
Q 036540 517 DNPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 517 dnpG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
+.||.|.|||| .|.+.||...|.|+
T Consensus 81 ~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 81 APAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 89999999999 89999999999885
No 81
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.78 E-value=1.5e-08 Score=87.47 Aligned_cols=79 Identities=13% Similarity=0.198 Sum_probs=56.8
Q ss_pred cCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCCCceEEecCc
Q 036540 55 NGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI 134 (562)
Q Consensus 55 Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~ 134 (562)
+..|-.+.|++++||+|++ +|....++++++.... +|........+.||++++|+| +++|+|+|+|-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 3445447999999999765 5888777777764322 121112223578999999888 479999999987
Q ss_pred hhhcccceeEEEEc
Q 036540 135 LWLRATVYGAIVIM 148 (562)
Q Consensus 135 ~~~~~Gl~G~iiV~ 148 (562)
|. ||.|.|+|+
T Consensus 122 H~---gM~G~I~V~ 132 (132)
T 3c75_A 122 HP---FMRGKVIVE 132 (132)
T ss_dssp CT---TCEEEEEEC
T ss_pred Cc---CCEEEEEEC
Confidence 54 999999985
No 82
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.71 E-value=4.5e-08 Score=80.16 Aligned_cols=79 Identities=13% Similarity=0.147 Sum_probs=62.5
Q ss_pred cCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCCCceEEecCc
Q 036540 55 NGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI 134 (562)
Q Consensus 55 Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~ 134 (562)
|..|-...|++++||+|++.++|.....+++...+.... ..+.||++.++.|+. +++|+|.|+|..
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~~ 87 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGTYELICRY 87 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEEEEEECTT
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCceEEEECcc
Confidence 445544689999999999999999877777766554321 347899999999986 899999999974
Q ss_pred hhhcccceeEEEEc
Q 036540 135 LWLRATVYGAIVIM 148 (562)
Q Consensus 135 ~~~~~Gl~G~iiV~ 148 (562)
| ...||.|.|+|+
T Consensus 88 H-~~~gM~G~i~Ve 100 (100)
T 4hci_A 88 H-LLKGMEGKVIVK 100 (100)
T ss_dssp T-GGGTCEEEEEEC
T ss_pred c-cCCCCEEEEEEC
Confidence 3 126999999996
No 83
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.70 E-value=3.9e-08 Score=85.93 Aligned_cols=99 Identities=18% Similarity=0.218 Sum_probs=70.6
Q ss_pred eEEeecCCEEEEEEEeCCCCCCCCCCeeecCC--CeEEE-Eec--CC---CCCCCCCCCCCCCCCCCccceeeecCCCEE
Q 036540 439 LSKVAFNSTIELVLQDTNLLTVESHPFHLHGY--NFFVV-GSG--IG---NFDPKKDPAKFNLVDPPERNTVGVPTGGWT 510 (562)
Q Consensus 439 ~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~--~F~vl-~~g--~g---~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~ 510 (562)
.+.++.|++|+|++.|.+. +...|.||++.. .+.-+ ..+ .+ .|-+.. -....+++|..|.|+...
T Consensus 34 ~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~t~~l~pG~~~ 106 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP------DTPNALAWTAMLNAGESG 106 (140)
T ss_dssp EEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT------TCTTEEEECCCBCTTEEE
T ss_pred eEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCcc------ccccccccceeeCCCcee
Confidence 4788999999999999321 257899999853 11100 000 00 010100 012346789999999999
Q ss_pred EEEEEecCceeEEEEeehhHhHhccceEEEEEec
Q 036540 511 AIRFRADNPGVWFMHCHLELHTMWGLKMAFVVEN 544 (562)
Q Consensus 511 ~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~~ 544 (562)
.+.|.++.||.|.|||++..|...||...+.|.+
T Consensus 107 ~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 107 SVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEEECCSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 9999999999999999999999999999998863
No 84
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.70 E-value=1.3e-07 Score=82.51 Aligned_cols=91 Identities=14% Similarity=0.142 Sum_probs=64.6
Q ss_pred CCCceEEEecCCEEEEEEEe--CCCCCceEEecCcc------------c----cCCCCCCCCCcc-cccccCCCCeEEEE
Q 036540 58 FPGPTIYIREGDRVLINVTN--HAQYNMSIHWHGLK------------Q----YRNGWADGPAYI-TQCPIKTGNSYTYD 118 (562)
Q Consensus 58 ~pgP~i~v~~Gd~v~i~~~N--~l~~~~siH~HG~~------------~----~~~~~~DGv~~~-t~~~i~pG~~~~y~ 118 (562)
|-.+.|+|++||+|+++++| .....++++.+... . ...+..|....+ ....|.||++.++.
T Consensus 30 F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~ 109 (140)
T 1qhq_A 30 FAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVT 109 (140)
T ss_dssp BSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred EeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEE
Confidence 33379999999999999999 66778888776321 0 000000111000 01357999999999
Q ss_pred EEeCCCCCceEEecCchhhc-ccceeEEEEcC
Q 036540 119 FNVTGQRGTLWWHAHILWLR-ATVYGAIVIMP 149 (562)
Q Consensus 119 ~~~~~~~Gt~wyH~h~~~~~-~Gl~G~iiV~~ 149 (562)
|.+ +.+|+|||||+..+.. .||.|.|+|.+
T Consensus 110 ~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 110 FRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 997 7899999999986665 79999999964
No 85
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.62 E-value=6.1e-08 Score=79.03 Aligned_cols=80 Identities=16% Similarity=0.224 Sum_probs=57.9
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCC-CCcccccccCCCCeEEEEEEeCCCCCceEEecCchhhcc
Q 036540 61 PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADG-PAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLRA 139 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DG-v~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~~ 139 (562)
+.|++++||+|+ ++|....++++|+|+...+.. .|. ....+...+.||++++++|. ++|+|+|||+.| ..+
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~~--~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~~H-~~~ 89 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPSG--VNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCEPH-QGA 89 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSCTT--CCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECGGG-GGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCCCc--cccccccccceecCCCCEEEEEeC---CCeEEEEEcCCc-ccc
Confidence 789999999875 589987899999998643211 111 00011235899999998873 799999999932 336
Q ss_pred cceeEEEEc
Q 036540 140 TVYGAIVIM 148 (562)
Q Consensus 140 Gl~G~iiV~ 148 (562)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 2plt_A 90 GMVGKIIVQ 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999984
No 86
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.56 E-value=2e-07 Score=74.79 Aligned_cols=73 Identities=22% Similarity=0.291 Sum_probs=54.8
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCCCceEEecCchhhccc
Q 036540 61 PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLRAT 140 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~~G 140 (562)
+.|++++||+|++ .|.....++++.++.... . .....+.||+++++.| +++|+|||||+.+ ..+|
T Consensus 19 ~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~~~----~-----~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H-~~~g 83 (91)
T 1bxv_A 19 STIEIQAGDTVQW--VNNKLAPHNVVVEGQPEL----S-----HKDLAFSPGETFEATF---SEPGTYTYYCEPH-RGAG 83 (91)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEETTCGGG----C-----EEEEECSTTCEEEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCcc----C-----cccceeCCCCEEEEEe---CCCEEEEEEeCCC-ccCC
Confidence 7899999999764 587777889988872110 0 1124689999988877 5799999999933 2269
Q ss_pred ceeEEEEc
Q 036540 141 VYGAIVIM 148 (562)
Q Consensus 141 l~G~iiV~ 148 (562)
|.|.|+|+
T Consensus 84 M~g~i~V~ 91 (91)
T 1bxv_A 84 MVGKIVVQ 91 (91)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999984
No 87
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.55 E-value=1.8e-07 Score=76.20 Aligned_cols=80 Identities=20% Similarity=0.209 Sum_probs=56.3
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCCCceEEecCchhhccc
Q 036540 61 PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLRAT 140 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~~G 140 (562)
+.|++++||+|++ +|.....++++.++...++.. .++.. .....+.||++++++| +++|+|+|||+.| ..+|
T Consensus 19 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~~-~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C~~H-~~~g 90 (98)
T 1pcs_A 19 STVTIKAGEEVKW--VNNKLSPHNIVFDADGVPADT-AAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYCEPH-RGAG 90 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECCSSSCHHH-HHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCCCccc-ccccc-ccccccCCCCEEEEEc---CCCeEEEEEcCCc-cccC
Confidence 7899999999765 588777889988865422000 00000 1124589999999887 4799999999932 2379
Q ss_pred ceeEEEEc
Q 036540 141 VYGAIVIM 148 (562)
Q Consensus 141 l~G~iiV~ 148 (562)
|.|.|+|+
T Consensus 91 M~G~i~V~ 98 (98)
T 1pcs_A 91 MVGKVVVE 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999985
No 88
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.52 E-value=2.8e-07 Score=75.04 Aligned_cols=78 Identities=15% Similarity=0.236 Sum_probs=58.3
Q ss_pred eEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCC-ccceeeecCCCEEEEEEEec
Q 036540 439 LSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPP-ERNTVGVPTGGWTAIRFRAD 517 (562)
Q Consensus 439 ~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~-~rDTv~vpp~g~~~irf~~d 517 (562)
.+.++.|++|+|+ |.+ ...|.||+|+..+- +. ..+. ..|+..+.|+....+.| +
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~p--g~----------------~~~~~~~~~~~~~pG~~~~~tf--~ 74 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNK---LSPHNIVFDADGVP--AD----------------TAAKLSHKGLLFAAGESFTSTF--T 74 (98)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEECCSSSC--HH----------------HHHHHCEEEEECSTTCEEEEEC--C
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCCCC--cc----------------ccccccccccccCCCCEEEEEc--C
Confidence 4688999999987 543 46899999874221 00 0001 15688899998887766 8
Q ss_pred CceeEEEEeehhHhHhccceEEEEEe
Q 036540 518 NPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 518 npG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
.||.|.|||| .|.+.||...|.|+
T Consensus 75 ~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 75 EPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 9999999999 79999999999874
No 89
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.51 E-value=2.4e-07 Score=75.48 Aligned_cols=81 Identities=15% Similarity=0.211 Sum_probs=59.2
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEec
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRAD 517 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d 517 (562)
..+.++.|++|+| .|.+ ...|.||+|+..+ +. ... ....++|+..+.|+....+.| +
T Consensus 18 ~~i~v~~G~~V~~--~n~~---~~~H~~~~~~~~~-----------p~----~~~-~~~~~~~~~~~~pG~~~~~tf--~ 74 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNA---GFPHNIVFDEDAI-----------PS----GVN-ADAISRDDYLNAPGETYSVKL--T 74 (98)
T ss_dssp SEEEECTTCEEEE--EECS---SCCEEEEECGGGS-----------CT----TCC-HHHHCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEE--EECC---CCceEEEEeCCCC-----------CC----ccc-cccccccceecCCCCEEEEEe--C
Confidence 3468899999998 4643 5689999987421 00 000 001246789999999887755 6
Q ss_pred CceeEEEEeehhHhHhccceEEEEEe
Q 036540 518 NPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 518 npG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
.||.|.|||| .|.+.||...+.|+
T Consensus 75 ~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 75 AAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp SCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 8999999999 79999999999874
No 90
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.50 E-value=3.6e-07 Score=74.26 Aligned_cols=77 Identities=18% Similarity=0.229 Sum_probs=54.7
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCc--ccccccCCCCeEEEEEEeCCCCCceEEecCchhhc
Q 036540 61 PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAY--ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLR 138 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~--~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~ 138 (562)
+.|++++||+| +++|.....++++.++.... +|... .....+.||+++++.| +++|+|+|||+.| ..
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H-~~ 87 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTPH-RG 87 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSST-TT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEccCh-hh
Confidence 78999999995 55687766777777754431 11000 0123579999999887 5799999999932 23
Q ss_pred ccceeEEEEc
Q 036540 139 ATVYGAIVIM 148 (562)
Q Consensus 139 ~Gl~G~iiV~ 148 (562)
+||.|.|+|+
T Consensus 88 ~gM~G~i~V~ 97 (97)
T 1b3i_A 88 AGMVGTITVE 97 (97)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEEC
Confidence 6999999984
No 91
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.48 E-value=3e-07 Score=73.71 Aligned_cols=73 Identities=18% Similarity=0.317 Sum_probs=56.6
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEec
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRAD 517 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d 517 (562)
..+.++.|++|+|+ |.+ ...|.+|+|+.. +...++..+.|++...+.| +
T Consensus 19 ~~i~v~~Gd~V~~~--n~~---~~~H~v~~~~~~------------------------~~~~~~~~~~~g~~~~~~f--~ 67 (91)
T 1bxv_A 19 STIEIQAGDTVQWV--NNK---LAPHNVVVEGQP------------------------ELSHKDLAFSPGETFEATF--S 67 (91)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCEEEEETTCG------------------------GGCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCcEEEEeCCC------------------------ccCcccceeCCCCEEEEEe--C
Confidence 34688999999986 533 468999988720 0114677888998777765 8
Q ss_pred CceeEEEEeehhHhHhccceEEEEEe
Q 036540 518 NPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 518 npG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
.||.|.|||| .|.+.||...+.|+
T Consensus 68 ~~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 68 EPGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCEEEEEEeC--CCccCCCEEEEEEC
Confidence 9999999999 89999999999874
No 92
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.46 E-value=5.2e-07 Score=76.29 Aligned_cols=75 Identities=13% Similarity=0.093 Sum_probs=52.1
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCCCceEEecCchhhccc
Q 036540 61 PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLRAT 140 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~~G 140 (562)
..|++++||+|++.+.|. ++++..+.. .+.+|.. ...+.||++++|+| +++|+|||+|..| ..+|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~~~-----~~P~g~~---~f~~~pg~t~s~TF---~~pG~y~y~C~~H-~~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---SHNVEAIKE-----ILPEGVE---SFKSKINESYTLTV---TEPGLYGVKCTPH-FGMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---TCCCEECTT-----SSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEcCC-----cCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 799999999977777662 333333221 1123321 23467999999888 4799999999833 2379
Q ss_pred ceeEEEEcCC
Q 036540 141 VYGAIVIMPK 150 (562)
Q Consensus 141 l~G~iiV~~~ 150 (562)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999863
No 93
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.45 E-value=3.8e-07 Score=77.54 Aligned_cols=76 Identities=16% Similarity=0.157 Sum_probs=52.3
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCCCceEEecCchhhccc
Q 036540 61 PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLRAT 140 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~~G 140 (562)
+.|++++||+|++.+.|. ++++..+... +-||.. ...+.||++++|+| +.+|+|||||..| ..+|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~~-----~P~g~~---~f~s~pGet~s~TF---~~pG~y~y~C~~H-~~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKGG-----APEGAE---TWKGKINEEITVTL---SKPGVYMYQCAPH-VGMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTTC-----SCTTCC---CCBCCTTCCCEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccCc-----CCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 799999999977665553 3443332111 122321 23457999988888 5799999999843 3479
Q ss_pred ceeEEEEcCCC
Q 036540 141 VYGAIVIMPKE 151 (562)
Q Consensus 141 l~G~iiV~~~~ 151 (562)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999999754
No 94
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.44 E-value=8.4e-07 Score=72.31 Aligned_cols=77 Identities=13% Similarity=0.212 Sum_probs=55.1
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCc------ccccccCCCCeEEEEEEeCCCCCceEEecCc
Q 036540 61 PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAY------ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI 134 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~------~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~ 134 (562)
+.|++++||+|+ ++|....+++++.++...+ +|... .....+.||++++++| +++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf---~~~G~y~~~C~~ 86 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVAL---SNKGEYSFYCSP 86 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEEC---CSCEEEEEECGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEE---CCCceEEEEcCC
Confidence 799999999865 5888777888887754321 12110 0113579999998877 379999999993
Q ss_pred hhhcccceeEEEEc
Q 036540 135 LWLRATVYGAIVIM 148 (562)
Q Consensus 135 ~~~~~Gl~G~iiV~ 148 (562)
| ..+||.|.|+|+
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1plc_A 87 H-QGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred C-cccCCEEEEEEC
Confidence 2 237999999984
No 95
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.43 E-value=5e-07 Score=74.11 Aligned_cols=82 Identities=13% Similarity=0.084 Sum_probs=54.2
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEecCccccCC--CCCCCCCcc--cccccCCCCeEEEEEEeCCCCCceEEecCchh
Q 036540 61 PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRN--GWADGPAYI--TQCPIKTGNSYTYDFNVTGQRGTLWWHAHILW 136 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~--~~~DGv~~~--t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~ 136 (562)
+.|++++||+|+ ++|....+++++.+.-..... ..++..+.+ ....+.||++++++| +++|+|+|||+ ..
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~-~H 90 (102)
T 1kdj_A 17 DSITVSAGEAVE--FTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYCT-PH 90 (102)
T ss_dssp SEEEECTTCCEE--EEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEECS-TT
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEeC-CC
Confidence 789999999976 568876777777762110000 000000111 123589999999887 57999999999 22
Q ss_pred hcccceeEEEEc
Q 036540 137 LRATVYGAIVIM 148 (562)
Q Consensus 137 ~~~Gl~G~iiV~ 148 (562)
..+||.|.|+|+
T Consensus 91 ~~~gM~G~i~V~ 102 (102)
T 1kdj_A 91 KSANMKGTLTVK 102 (102)
T ss_dssp GGGTCEEEEEEC
T ss_pred cccCCeEEEEEC
Confidence 337999999985
No 96
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.41 E-value=1.1e-06 Score=71.68 Aligned_cols=77 Identities=14% Similarity=0.223 Sum_probs=55.8
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCc------ccccccCCCCeEEEEEEeCCCCCceEEecCc
Q 036540 61 PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAY------ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI 134 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~------~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~ 134 (562)
+.|++++||+| +++|....+++++.++...+ +|... .....+.||+++++.| +++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~p-----~g~~~~~~~~~~~~~~~~~G~~~~~~f---~~~G~y~~~C~~ 86 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEVP-----AGVDVTKISMPEEDLLNAPGEEYSVTL---TEKGTYKFYCAP 86 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSSC-----TTCCHHHHSCCTTCCBCSTTCEEEEEE---CSCEEEEEECGG
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCCc-----cccccccccccccceeeCCCCEEEEEe---CCCcEEEEEcCC
Confidence 68999999985 55898877888888864321 22110 1113579999999887 379999999993
Q ss_pred hhhcccceeEEEEc
Q 036540 135 LWLRATVYGAIVIM 148 (562)
Q Consensus 135 ~~~~~Gl~G~iiV~ 148 (562)
...+||.|.|+|+
T Consensus 87 -H~~~gM~G~i~V~ 99 (99)
T 1byp_A 87 -HAGAGMVGKVTVN 99 (99)
T ss_dssp -GTTTTCEEEEEEC
T ss_pred -ccccCCEEEEEEC
Confidence 2336999999984
No 97
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.39 E-value=9e-07 Score=74.73 Aligned_cols=75 Identities=7% Similarity=-0.027 Sum_probs=52.4
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCCCceEEecCchhhccc
Q 036540 61 PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLRAT 140 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~~G 140 (562)
..|++++||+|+ ++|.. .++++..+.... .+|. ....+.||++++|+| +.+|+|+|||-.| ..+|
T Consensus 22 ~~i~V~~GDTV~--f~n~~-~~Hnv~~~~~~~-----p~g~---~~~~~~pg~t~s~TF---~~~G~y~Y~C~~H-~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVK--FVPTD-KSHNAESVREVW-----PEGV---APVKGGFSKEVVFNA---EKEGLYVLKCAPH-YGMG 86 (124)
T ss_dssp SEEEECTTCEEE--EECSS-SSCCCEECTTTS-----CTTS---CCCBCCTTCCEEEEC---CSSEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEE--EEECC-CCccEEEeCCcC-----CCCc---cccccCCCCEEEEEe---CCCeEEEEEcCCC-CcCC
Confidence 799999999965 55654 566665542211 2232 123467999999888 4799999999632 2379
Q ss_pred ceeEEEEcCC
Q 036540 141 VYGAIVIMPK 150 (562)
Q Consensus 141 l~G~iiV~~~ 150 (562)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999874
No 98
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.39 E-value=6.5e-07 Score=72.70 Aligned_cols=78 Identities=17% Similarity=0.287 Sum_probs=57.5
Q ss_pred eEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEecC
Q 036540 439 LSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRADN 518 (562)
Q Consensus 439 ~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dn 518 (562)
.+.++.|++|+|+ |.+ ...|.+++++..+. .. . .....++..+.|++...+.| +.
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~~-----------~~-~------~~~~~~~~~~~~g~~~~~tf--~~ 74 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNK---VGPHNVIFDKVPAG-----------ES-A------PALSNTKLAIAPGSFYSVTL--GT 74 (97)
T ss_dssp EEEECTTCEEEEE--ECS---SCCCCBEEEECCTT-----------SC-H------HHHCBCCCCCSCSCCEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCCCCc-----------cc-c------ccccccceecCCCCEEEEEe--CC
Confidence 4688999999887 543 46899998865430 00 0 00114677888888877765 89
Q ss_pred ceeEEEEeehhHhHhccceEEEEEe
Q 036540 519 PGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 519 pG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
||.|.|||+ .|.+.||...+.|+
T Consensus 75 ~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 75 PGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CSEEEEECS--STTTTTCEEEEEEC
T ss_pred CeEEEEEcc--ChhhcCCEEEEEEC
Confidence 999999999 89999999999874
No 99
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.37 E-value=1.1e-06 Score=73.51 Aligned_cols=75 Identities=19% Similarity=0.319 Sum_probs=58.2
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEec
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRAD 517 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d 517 (562)
+.+.++.|+.|+|.+.|.. ...|-|++... .-+..++||....+.|.++
T Consensus 38 ~~i~v~~G~~V~~~~~n~d---~~~H~~~i~~~----------------------------~~~~~i~pG~~~~~~f~~~ 86 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKS---PISEGFSIDAF----------------------------GVQEVIKAGETKTISFTAD 86 (112)
T ss_dssp CEEEEETTCEEEEEEEECS---SSCEEEEEGGG----------------------------TEEEEECTTCEEEEEEECC
T ss_pred CEEEEeCCCEEEEEEEECC---CCeEEEEEcCC----------------------------CceeEeCCCCEEEEEEECC
Confidence 3478899999999999964 33444443321 1156789999999999999
Q ss_pred CceeEEEEeehhHhHhccceEEEEEec
Q 036540 518 NPGVWFMHCHLELHTMWGLKMAFVVEN 544 (562)
Q Consensus 518 npG~w~~HCHil~H~d~GM~~~~~V~~ 544 (562)
.||.|.||||+..|... |...+.|++
T Consensus 87 ~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 87 KAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp SCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred CCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 99999999999887654 999988863
No 100
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.35 E-value=1.6e-06 Score=70.67 Aligned_cols=82 Identities=13% Similarity=0.101 Sum_probs=58.2
Q ss_pred eEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEecC
Q 036540 439 LSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRADN 518 (562)
Q Consensus 439 ~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dn 518 (562)
.+.++.|++|+| .|.+ ...|.||+++..|- .+ ++. .. ....+|++.+.|+....+.| +.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~p---~g---~~~------~~--~~~~~~~~~~~~G~~~~~~f--~~ 76 (99)
T 1byp_A 18 DLSIASGEKITF--KNNA---GFPHNDLFDKKEVP---AG---VDV------TK--ISMPEEDLLNAPGEEYSVTL--TE 76 (99)
T ss_dssp EEEECTTEEEEE--EECS---SCCBCCEECTTSSC---TT---CCH------HH--HSCCTTCCBCSTTCEEEEEE--CS
T ss_pred EEEECCCCEEEE--EECC---CCcceEEEeCCCCc---cc---ccc------cc--ccccccceeeCCCCEEEEEe--CC
Confidence 467899999988 4643 56899999975430 00 000 00 01225677889998877765 69
Q ss_pred ceeEEEEeehhHhHhccceEEEEEe
Q 036540 519 PGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 519 pG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
||.|.|||+ .|.+.||...+.|+
T Consensus 77 ~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 77 KGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CcEEEEEcC--CccccCCEEEEEEC
Confidence 999999999 79999999999874
No 101
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.32 E-value=1.6e-06 Score=70.78 Aligned_cols=72 Identities=19% Similarity=0.421 Sum_probs=57.8
Q ss_pred eEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEecC
Q 036540 439 LSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRADN 518 (562)
Q Consensus 439 ~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dn 518 (562)
.+.++.|++|+|++.|.+ ...|.|.+.+..+ ...+.||....+.|+++.
T Consensus 29 ~i~v~~G~tV~~~~~n~d---~~~H~~~~~~~~~----------------------------~~~~~pg~~~~~~~t~~~ 77 (100)
T 4hci_A 29 VITIPINESTTLLLKNKG---KSEHTFTIKKLGI----------------------------DVVVESGKEKNITVKPKS 77 (100)
T ss_dssp EEEECTTSCEEEEEEECS---SSCEEEEEGGGTE----------------------------EEEECTTCEEEEEECCCS
T ss_pred EEEECCCCEEEEEEEcCC---CceEEEEEecCCc----------------------------ceeecCCcceeEEEeccc
Confidence 478899999999999964 4567666544322 235677888899999999
Q ss_pred ceeEEEEeehhHhHhccceEEEEEe
Q 036540 519 PGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 519 pG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
||.|.|+|. .|...||...+.|+
T Consensus 78 ~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 78 AGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CceEEEECc--cccCCCCEEEEEEC
Confidence 999999997 59999999999885
No 102
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.26 E-value=2.6e-06 Score=72.61 Aligned_cols=93 Identities=9% Similarity=0.022 Sum_probs=61.0
Q ss_pred cCCCceEEEecC-CEEEEEEEeCCCCC-----ceE--EecCccc-------------cCCCCCCCCCcccccccCCCCeE
Q 036540 57 MFPGPTIYIREG-DRVLINVTNHAQYN-----MSI--HWHGLKQ-------------YRNGWADGPAYITQCPIKTGNSY 115 (562)
Q Consensus 57 ~~pgP~i~v~~G-d~v~i~~~N~l~~~-----~si--H~HG~~~-------------~~~~~~DGv~~~t~~~i~pG~~~ 115 (562)
+|--..|.|++| |+|+|+|+|....+ +++ --+|... ...+..|.--......|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 343368999999 99999999987543 333 2233110 00000111000011347999999
Q ss_pred EEEEEeC--CCCCceEEecCchhhcccceeEEEEcC
Q 036540 116 TYDFNVT--GQRGTLWWHAHILWLRATVYGAIVIMP 149 (562)
Q Consensus 116 ~y~~~~~--~~~Gt~wyH~h~~~~~~Gl~G~iiV~~ 149 (562)
++.|+++ .++|+|||.|-..+.+.||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 9999973 289999999987776668999999963
No 103
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.25 E-value=2.5e-06 Score=69.86 Aligned_cols=85 Identities=13% Similarity=0.074 Sum_probs=57.3
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCc-cceeeecCCCEEEEEEEe
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPE-RNTVGVPTGGWTAIRFRA 516 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~-rDTv~vpp~g~~~irf~~ 516 (562)
..+.++.|++|+|+ |.+ ...|.|+++.-. .++... .... ..+.+ .+++.+.|+....+.|
T Consensus 17 ~~i~v~~G~tV~~~--n~~---~~~H~~~~~~~~---------~~~~~~--~~~~-~~~~~~~~~~~~~pG~~~~~tf-- 77 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVG---ETGHNIVFDIPA---------GAPGTV--ASEL-KAASMDENDLLSEDEPSFKAKV-- 77 (102)
T ss_dssp SEEEECTTCCEEEE--ECS---SSCBCCEECCCT---------TCCHHH--HHHH-HHTSCCTTCCBBTTBCEEEECC--
T ss_pred CEEEECCCCEEEEE--ECC---CCCeEEEEeCcc---------cccccc--cchh-hcccccccceecCCCCEEEEEe--
Confidence 34688999999986 643 468999987310 000000 0000 00122 4677888998877766
Q ss_pred cCceeEEEEeehhHhHhccceEEEEEe
Q 036540 517 DNPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 517 dnpG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
+.||.|.|||+ .|.+.||...+.|+
T Consensus 78 ~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 78 STPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp CSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred CCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 89999999999 99999999999874
No 104
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.20 E-value=7.9e-06 Score=67.35 Aligned_cols=77 Identities=13% Similarity=0.221 Sum_probs=53.6
Q ss_pred cCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCCCceEEecCchh
Q 036540 57 MFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILW 136 (562)
Q Consensus 57 ~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~ 136 (562)
.|--..|++++||+|++ +|.....+++....... |........+.||+++++.| +++|+|+|+|-.|.
T Consensus 30 ~F~P~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~~-------~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~ 97 (106)
T 1id2_A 30 KYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGIV-------GEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP 97 (106)
T ss_dssp EESSSEEEECTTCEEEE--EECSSSCBCCEECTTTS-------SSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT
T ss_pred EEeCCEEEECCCCEEEE--EECCCCcEEEEEeCCCC-------CcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC
Confidence 44337999999999754 58876666665543221 11011112478999999888 47999999998764
Q ss_pred hcccceeEEEEc
Q 036540 137 LRATVYGAIVIM 148 (562)
Q Consensus 137 ~~~Gl~G~iiV~ 148 (562)
||.|.|+|+
T Consensus 98 ---~M~G~I~V~ 106 (106)
T 1id2_A 98 ---FMRGKVIVE 106 (106)
T ss_dssp ---TCEEEEEEC
T ss_pred ---CCEEEEEEC
Confidence 999999984
No 105
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.19 E-value=4.3e-06 Score=74.22 Aligned_cols=92 Identities=10% Similarity=0.051 Sum_probs=61.1
Q ss_pred cCCCceEEE-ecCCEEEEEEEeCCCCC-----ceEE--ecCccc---------c---CCCCCCCCCcccccccCCCCeEE
Q 036540 57 MFPGPTIYI-REGDRVLINVTNHAQYN-----MSIH--WHGLKQ---------Y---RNGWADGPAYITQCPIKTGNSYT 116 (562)
Q Consensus 57 ~~pgP~i~v-~~Gd~v~i~~~N~l~~~-----~siH--~HG~~~---------~---~~~~~DGv~~~t~~~i~pG~~~~ 116 (562)
+|--..|.| ++||+|+|+|+|....+ +++- -+|... . ..+..|.--......|.||++.+
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 553368999 99999999999997653 3322 222100 0 00001110000112489999999
Q ss_pred EEEEeCC--CCCceEEecCchhhcccceeEEEEcC
Q 036540 117 YDFNVTG--QRGTLWWHAHILWLRATVYGAIVIMP 149 (562)
Q Consensus 117 y~~~~~~--~~Gt~wyH~h~~~~~~Gl~G~iiV~~ 149 (562)
+.|++ . ++|+|||+|-..+.+.||.|-|+|.+
T Consensus 134 vtf~~-~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDP-AKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp EEECG-GGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred EEEec-CCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 99987 4 79999999988777679999999963
No 106
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.18 E-value=7.9e-06 Score=66.32 Aligned_cols=77 Identities=13% Similarity=0.103 Sum_probs=54.3
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCc----ccccccCCCCeEEEEEEeCCCCCceEEecCchh
Q 036540 61 PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAY----ITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILW 136 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~----~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~ 136 (562)
+.|++++||+|++ +|.....+++....-.. .+|... .....+.||++++++| +++|+|+|+|..|.
T Consensus 18 ~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H~ 87 (98)
T 1iuz_A 18 SKISVAAGEAIEF--VNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPHA 87 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTTG
T ss_pred CEEEECCCCEEEE--EECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEchhhc
Confidence 7999999999654 68876777777654211 122210 0113589999998887 57999999998632
Q ss_pred hcccceeEEEEc
Q 036540 137 LRATVYGAIVIM 148 (562)
Q Consensus 137 ~~~Gl~G~iiV~ 148 (562)
.+||.|.|+|+
T Consensus 88 -~~gM~G~I~V~ 98 (98)
T 1iuz_A 88 -GAGMKMTITVQ 98 (98)
T ss_dssp -GGTCEEEEEEC
T ss_pred -cCCCEEEEEEC
Confidence 26999999985
No 107
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.12 E-value=8.9e-06 Score=68.79 Aligned_cols=75 Identities=13% Similarity=0.142 Sum_probs=49.3
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCCCceEEecCchhhccc
Q 036540 61 PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLRAT 140 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~~G 140 (562)
+.|++++||+|++ +|... .+++..+ .....||.. .....||++++|+| +.+|+|+|+|..| ..+|
T Consensus 21 ~~i~V~~GdtV~f--~~~~~-~H~v~~~-----~~~~p~~~~---~~~~~pG~t~~~tF---~~~G~y~y~C~~H-~~~g 85 (123)
T 1paz_A 21 AYIKANPGDTVTF--IPVDK-GHNVESI-----KDMIPEGAE---KFKSKINENYVLTV---TQPGAYLVKCTPH-YAMG 85 (123)
T ss_dssp SEEEECTTCEEEE--EESSS-SCCCEEC-----TTCSCTTCC---CCBCCTTCCEEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEE--EECCC-CeEEEEe-----cccCCCCcc---ceecCCCCEEEEEe---CCCEEEEEEeCCc-ccCC
Confidence 7999999999754 55533 3443332 111123321 12346999988877 4799999999742 2279
Q ss_pred ceeEEEEcCC
Q 036540 141 VYGAIVIMPK 150 (562)
Q Consensus 141 l~G~iiV~~~ 150 (562)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 9999999874
No 108
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.08 E-value=2.1e-05 Score=66.98 Aligned_cols=91 Identities=14% Similarity=0.129 Sum_probs=60.0
Q ss_pred cCCCceEEE-ecCCEEEEEEEeCCCCC-----ceEEe--cCccc-------------cCCCCCCCCCcc-cccccCCCCe
Q 036540 57 MFPGPTIYI-REGDRVLINVTNHAQYN-----MSIHW--HGLKQ-------------YRNGWADGPAYI-TQCPIKTGNS 114 (562)
Q Consensus 57 ~~pgP~i~v-~~Gd~v~i~~~N~l~~~-----~siH~--HG~~~-------------~~~~~~DGv~~~-t~~~i~pG~~ 114 (562)
+|--..|.| ++||+|+|+|+|....+ +++-+ +|... ...+..|. ..+ ....|.||++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~t~~l~pGet 92 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDT-RVIAHTKVIGGGES 92 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCT-TEEEECCCBCTTCE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccc-cceeeeeEECCCCE
Confidence 443368999 99999999999997653 44332 22100 00000111 001 1124799999
Q ss_pred EEEEEEeCC--CCCc-eEEecCchhhcccceeEEEEcC
Q 036540 115 YTYDFNVTG--QRGT-LWWHAHILWLRATVYGAIVIMP 149 (562)
Q Consensus 115 ~~y~~~~~~--~~Gt-~wyH~h~~~~~~Gl~G~iiV~~ 149 (562)
.++.|++ . ++|+ |||.|-..+.+.||.|.|+|.+
T Consensus 93 ~svtf~~-~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~~ 129 (129)
T 2ccw_A 93 DSVTFDV-SKIAAGENYAYFCSFPGHWAMMKGTLKLGS 129 (129)
T ss_dssp EEEEEEG-GGSCTTCCEEEECCSTTGGGTSEEEEEECC
T ss_pred EEEEEec-cccCCCceEEEEeCCCChhHcCEEEEEEeC
Confidence 9999997 4 5655 9999988777779999999963
No 109
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.08 E-value=2.2e-05 Score=66.67 Aligned_cols=91 Identities=15% Similarity=0.186 Sum_probs=60.9
Q ss_pred cCCCceEEE-ecCCEEEEEEEeCCCCC-----ceEEec--C---------ccc----cCCCCCCCCCcc-cccccCCCCe
Q 036540 57 MFPGPTIYI-REGDRVLINVTNHAQYN-----MSIHWH--G---------LKQ----YRNGWADGPAYI-TQCPIKTGNS 114 (562)
Q Consensus 57 ~~pgP~i~v-~~Gd~v~i~~~N~l~~~-----~siH~H--G---------~~~----~~~~~~DGv~~~-t~~~i~pG~~ 114 (562)
+|--..|.| +.|++|+|+|+|....+ +++-+- + +.. ...+..|. ..+ ....|.||++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~-~~~~~t~~l~pGes 91 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDE-RVIAHTSVIGGGET 91 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCT-TEEEECCCBCTTCE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccc-hhhccceeeCCCCE
Confidence 443368999 99999999999998654 444332 1 000 00000111 001 1124799999
Q ss_pred EEEEEEeCC--CCCc-eEEecCchhhcccceeEEEEcC
Q 036540 115 YTYDFNVTG--QRGT-LWWHAHILWLRATVYGAIVIMP 149 (562)
Q Consensus 115 ~~y~~~~~~--~~Gt-~wyH~h~~~~~~Gl~G~iiV~~ 149 (562)
.++.|++ . ++|+ |+|.|-..+.+.||.|.|+|.+
T Consensus 92 ~~vtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~~ 128 (128)
T 2iaa_C 92 DSVTFDV-SKLKEGEDYAFFCSFPGHWSIMKGTIELGS 128 (128)
T ss_dssp EEEEEES-SCCCTTCCEEEECCSTTCTTTSEEEEEECC
T ss_pred EEEEEec-cccCCCceEEEEECCCChhHCCEEEEEEeC
Confidence 9999997 4 6885 9999988777779999999963
No 110
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.08 E-value=6.8e-06 Score=66.83 Aligned_cols=83 Identities=13% Similarity=0.095 Sum_probs=57.3
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEec
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRAD 517 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d 517 (562)
..+.++.|++|+| .|.+ ...|.++++...+- .+ . .... ....++.+.+.|+....+.| +
T Consensus 17 ~~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~~p---~~------~---~~~~--~~~~~~~~~~~~G~~~~~tf--~ 75 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNA---GFPHNIVFDEDSIP---SG------V---DASK--ISMSEEDLLNAKGETFEVAL--S 75 (99)
T ss_dssp SEEEECTTCEEEE--EECS---SCCBCCEECTTSSC---TT------C---CHHH--HCCCTTCCBCSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEE--EECC---CCceEEEEeCCCCc---cc------c---cccc--cccccCccccCCCCEEEEEE--C
Confidence 3478899999988 4643 56899998864320 00 0 0000 01124557788988777755 6
Q ss_pred CceeEEEEeehhHhHhccceEEEEEe
Q 036540 518 NPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 518 npG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
.||.|.|||+ .|.+.||...+.|+
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 76 NKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCceEEEEcC--CCcccCCEEEEEEC
Confidence 9999999999 79999999999874
No 111
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.08 E-value=8.9e-06 Score=68.79 Aligned_cols=76 Identities=12% Similarity=0.176 Sum_probs=50.3
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCCCceEEecCchhhccc
Q 036540 61 PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLRAT 140 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~~G 140 (562)
+.|++++||+|+ ++|... .+++..+ ...+.||.. ...+.||++++|+| +.+|+|+|+|..| ..+|
T Consensus 21 ~~i~V~~GdtV~--f~n~~~-~H~v~~~-----~~~~p~~~~---~~~~~pG~t~~~tF---~~~G~y~y~C~~H-~~~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIK--FLPTDK-GHNVETI-----KGMAPDGAD---YVKTTVGQEAVVKF---DKEGVYGFKCAPH-YMMG 85 (123)
T ss_dssp SEEEECTTCEEE--EECSSS-SCCCEEC-----TTSSCTTCC---CCBCCTTSCEEEEC---CSCEEEEEECSTT-TTTT
T ss_pred CEEEECCCCEEE--EEECCC-CcEEEEe-----cccCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCc-cccC
Confidence 799999999955 556543 4433332 111123321 13457999988887 4799999999742 2279
Q ss_pred ceeEEEEcCCC
Q 036540 141 VYGAIVIMPKE 151 (562)
Q Consensus 141 l~G~iiV~~~~ 151 (562)
|.|.|+|.++.
T Consensus 86 M~G~I~V~~~~ 96 (123)
T 1pmy_A 86 MVALVVVGDKR 96 (123)
T ss_dssp CEEEEEESSCC
T ss_pred CEEEEEEcCCC
Confidence 99999998643
No 112
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.02 E-value=3.1e-05 Score=65.78 Aligned_cols=91 Identities=13% Similarity=0.111 Sum_probs=59.7
Q ss_pred cCCCceEEE-ecCCEEEEEEEeCCCCC-----ceEEe--cCccc-------cCCCCC-----CCCCcc-cccccCCCCeE
Q 036540 57 MFPGPTIYI-REGDRVLINVTNHAQYN-----MSIHW--HGLKQ-------YRNGWA-----DGPAYI-TQCPIKTGNSY 115 (562)
Q Consensus 57 ~~pgP~i~v-~~Gd~v~i~~~N~l~~~-----~siH~--HG~~~-------~~~~~~-----DGv~~~-t~~~i~pG~~~ 115 (562)
+|--..|.| ++||+|+|+|+|....+ +++-. .|... .....+ |....+ ....|.||++.
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 443368999 99999999999997653 44333 22110 000001 111001 01248999999
Q ss_pred EEEEEeCC--CCCc-eEEecCchhhcccceeEEEEc
Q 036540 116 TYDFNVTG--QRGT-LWWHAHILWLRATVYGAIVIM 148 (562)
Q Consensus 116 ~y~~~~~~--~~Gt-~wyH~h~~~~~~Gl~G~iiV~ 148 (562)
++.|.+ . .+|+ |||.|-..+.+.||.|.|+|.
T Consensus 94 svtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDV-SKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EEEEEG-GGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred EEEEec-cccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 999997 4 5776 999998877777999999984
No 113
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.99 E-value=3.1e-05 Score=80.74 Aligned_cols=96 Identities=19% Similarity=0.311 Sum_probs=66.1
Q ss_pred cCCce--eeEEEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEe
Q 036540 44 RLCNS--KPIVTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNV 121 (562)
Q Consensus 44 ~~g~~--~~~~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~ 121 (562)
++|.. ..+...+-.+-.+.|+|++||+|++.++|.....-.+ ||+.+.. -|+ ..-+.||++.++.|.+
T Consensus 539 RdGnkV~V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDVi--HSF~IPs----lGI----K~DaiPGrtnsvtFta 608 (638)
T 3sbq_A 539 RDGNKVRVYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVS--HGFVVVN----HGV----SMEISPQQTSSITFVA 608 (638)
T ss_dssp EETTEEEEEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCC--EEEEETT----TTE----EEEECTTCEEEEEEEC
T ss_pred cCCceEEEEEEEEcccccCCEEEEecCceeEEEEecCCcCCCce--eeeEecC----CCc----eeeeCCCCeEEEEEEc
Confidence 34543 3344555666557999999999999999974321122 2333221 111 1357899999999997
Q ss_pred CCCCCceEEecCch-hhc-ccceeEEEEcCC
Q 036540 122 TGQRGTLWWHAHIL-WLR-ATVYGAIVIMPK 150 (562)
Q Consensus 122 ~~~~Gt~wyH~h~~-~~~-~Gl~G~iiV~~~ 150 (562)
+++|+|||+|... +.. .+|.|.|+|+++
T Consensus 609 -dkPGvY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 609 -DKPGLHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp -CSCEEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred -CCCEEEEEECCCcCCCCcccceEEEEEecC
Confidence 8999999999853 222 789999999864
No 114
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.97 E-value=3.5e-05 Score=67.94 Aligned_cols=85 Identities=16% Similarity=0.284 Sum_probs=60.1
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccce-------eeecCCC--
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNT-------VGVPTGG-- 508 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDT-------v~vpp~g-- 508 (562)
+.+.++.|++|.+++.|.+ ....|-|-++. .+. .+.. -|...+. ..|.||.
T Consensus 61 p~i~V~~GD~V~~~~tN~~--~~~~H~~~i~~-------~~~-~~~~----------~~~~~~~~~~~~~~~~i~PG~sg 120 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTN--KGFGHSFDITK-------KGP-PYAV----------MPVIDPIVAGTGFSPVPKDGKFG 120 (154)
T ss_dssp CEEEECTTCEEEEEEEECC--TTCCCCCEEES-------CCS-CCCS----------SCCCCSEEEEBCCCCCCBTTBEE
T ss_pred CEEEEeCCCEEEEEEEcCC--CCeeeEEEEee-------cCc-chhc----------cccccccccccccccccCCCCce
Confidence 4588999999999999953 13456555542 111 0100 0001111 2678888
Q ss_pred EEEEEEEecCceeEEEEeehhHhHhccceEEEEEe
Q 036540 509 WTAIRFRADNPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 509 ~~~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
...+.|++ .||.|.||||+.-|...||-..+.|+
T Consensus 121 t~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 121 YTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 89999999 99999999999999999999999874
No 115
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.94 E-value=2.1e-05 Score=66.37 Aligned_cols=73 Identities=14% Similarity=0.142 Sum_probs=50.0
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCCCceEEecCchhhccc
Q 036540 61 PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHILWLRAT 140 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~~~~~G 140 (562)
+.|++++||+|++ +|... .++++...- .+.+|.. ...+.||++++|+| +++|+|+|+|..|..
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~~-----~~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIKG-----MIPDGAE---AFKSKINENYKVTF---TAPGVYGVKCTPHPF--- 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECTT-----CSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEETTEEE---
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEccc-----ccCCCcc---eeecCCCCEEEEEe---CCCEEEEEEeCCCcc---
Confidence 7999999998655 56643 444444321 1122221 13457999998888 479999999987543
Q ss_pred ceeEEEEcCC
Q 036540 141 VYGAIVIMPK 150 (562)
Q Consensus 141 l~G~iiV~~~ 150 (562)
|.|.|+|.++
T Consensus 84 M~G~I~V~~~ 93 (122)
T 2ux6_A 84 MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEESSS
T ss_pred CEEEEEEeCC
Confidence 9999999874
No 116
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.85 E-value=4.7e-05 Score=81.16 Aligned_cols=78 Identities=19% Similarity=0.368 Sum_probs=62.3
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEec
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRAD 517 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d 517 (562)
+.+.++.|++|+|++.|........|.|+++++.+. ..+.||....+.|+++
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------------------~~i~PG~t~t~~Fta~ 564 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------------------MEIGPQMTSSVTFVAA 564 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEECC
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------------------eeeCCCCeEEEEEECC
Confidence 457899999999999996422244799988875321 4577888999999999
Q ss_pred CceeEEEEee---hhHhHhccceEEEEEecC
Q 036540 518 NPGVWFMHCH---LELHTMWGLKMAFVVENG 545 (562)
Q Consensus 518 npG~w~~HCH---il~H~d~GM~~~~~V~~~ 545 (562)
.||.|.|||| ...|. ||...+.|++.
T Consensus 565 ~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 565 NPGVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp SCEEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred CCEEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 9999999999 35675 99999999753
No 117
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.85 E-value=4.9e-05 Score=62.39 Aligned_cols=73 Identities=18% Similarity=0.259 Sum_probs=50.0
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEec
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRAD 517 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d 517 (562)
..+.++.|++|+|+ |.. ...|.+|+|... .|. .. -++-.+.||....+.| +
T Consensus 33 ~~i~v~~Gd~V~~~--N~d---~~~H~v~~~~~~-------~g~--------------~~-~~~~~~~pG~~~~~tf--~ 83 (105)
T 2ov0_A 33 PELHVKVGDTVTWI--NRE---AMPHNVHFVAGV-------LGE--------------AA-LKGPMMKKEQAYSLTF--T 83 (105)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS--------------SC-EECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCEEEEEcCCC-------CCc--------------cc-ccccccCCCCEEEEEe--C
Confidence 45788999999985 643 568999988521 010 00 1122367777655554 8
Q ss_pred CceeEEEEeehhHhHhccceEEEEEe
Q 036540 518 NPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 518 npG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
.||.|.|||++ |. ||...|.|+
T Consensus 84 ~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 84 EAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999998 65 999998874
No 118
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.49 E-value=0.00076 Score=56.36 Aligned_cols=89 Identities=11% Similarity=0.194 Sum_probs=55.3
Q ss_pred cCCCceEEEec-CCEEEEEEEeCCCCC-----ceEEe-----------cCccccCC-CC---CCCCCcccccccCCCCeE
Q 036540 57 MFPGPTIYIRE-GDRVLINVTNHAQYN-----MSIHW-----------HGLKQYRN-GW---ADGPAYITQCPIKTGNSY 115 (562)
Q Consensus 57 ~~pgP~i~v~~-Gd~v~i~~~N~l~~~-----~siH~-----------HG~~~~~~-~~---~DGv~~~t~~~i~pG~~~ 115 (562)
+|--..|.|+. |++|+|+|+|....+ +++=. -|+..-+. .+ .|.---.....|.||++.
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 34447999986 999999999998543 33222 11111000 10 111100111248999999
Q ss_pred EEEEEeC--CCCCceEEecCchhhcccceeEEEEc
Q 036540 116 TYDFNVT--GQRGTLWWHAHILWLRATVYGAIVIM 148 (562)
Q Consensus 116 ~y~~~~~--~~~Gt~wyH~h~~~~~~Gl~G~iiV~ 148 (562)
+..|+.+ .++|+|.|.|. +.+ ||.|.|+|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~-~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA-AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST-TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC-CcEEEEEEC
Confidence 9999983 27999999999 444 999999884
No 119
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.21 E-value=0.00074 Score=57.14 Aligned_cols=76 Identities=21% Similarity=0.246 Sum_probs=50.3
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEec
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRAD 517 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d 517 (562)
..+.++.|++|+|++.|. .|-+..+... + |.. ...+.+.|+... .++++
T Consensus 23 ~~i~V~~GDtVtf~n~~~------~H~v~~~~~~----------~-P~g------------~~~f~s~pGet~--s~TF~ 71 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK------GHNSALMKGG----------A-PEG------------AETWKGKINEEI--TVTLS 71 (127)
T ss_dssp SEEEECTTCEEEEECSSS------SCCCEECTTC----------S-CTT------------CCCCBCCTTCCC--EEECC
T ss_pred CEEEECCCCEEEEEECCC------CceEEEccCc----------C-CCC------------ccceecCCCCEE--EEEeC
Confidence 347889999999987651 4555543210 0 100 011223456654 44558
Q ss_pred CceeEEEEeehhHhHhccceEEEEEecCC
Q 036540 518 NPGVWFMHCHLELHTMWGLKMAFVVENGK 546 (562)
Q Consensus 518 npG~w~~HCHil~H~d~GM~~~~~V~~~~ 546 (562)
.||.|.|||- .|...||...+.|.++.
T Consensus 72 ~pG~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 72 KPGVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CCeEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 9999999999 69999999999998754
No 120
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.19 E-value=0.0011 Score=55.83 Aligned_cols=75 Identities=19% Similarity=0.211 Sum_probs=50.6
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEec
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRAD 517 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d 517 (562)
..+.++.|++|+|+..+ ..|.+..+.. .+. . -.+...+.++....+ +++
T Consensus 22 ~~i~V~~GDTV~f~n~~------~~Hnv~~~~~----------~~p-~------------g~~~~~~~pg~t~s~--TF~ 70 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTD------KSHNAESVRE----------VWP-E------------GVAPVKGGFSKEVVF--NAE 70 (124)
T ss_dssp SEEEECTTCEEEEECSS------SSCCCEECTT----------TSC-T------------TSCCCBCCTTCCEEE--ECC
T ss_pred CEEEECCCCEEEEEECC------CCccEEEeCC----------cCC-C------------CccccccCCCCEEEE--EeC
Confidence 34788999999998543 3677665421 110 0 011223446665454 458
Q ss_pred CceeEEEEeehhHhHhccceEEEEEecC
Q 036540 518 NPGVWFMHCHLELHTMWGLKMAFVVENG 545 (562)
Q Consensus 518 npG~w~~HCHil~H~d~GM~~~~~V~~~ 545 (562)
.||.|.|||- .|...||...+.|.++
T Consensus 71 ~~G~y~Y~C~--~H~~~GM~G~I~V~~p 96 (124)
T 3ef4_A 71 KEGLYVLKCA--PHYGMGMVVLVQVGKP 96 (124)
T ss_dssp SSEEEEEECT--TTGGGTCEEEEEESSC
T ss_pred CCeEEEEEcC--CCCcCCCEEEEEECCC
Confidence 9999999995 8999999999999864
No 121
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.14 E-value=0.0016 Score=54.75 Aligned_cols=74 Identities=16% Similarity=0.219 Sum_probs=50.1
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEec
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRAD 517 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d 517 (562)
..+.++.|++|+|++.|. .|-+..+.. .. |.. . +.+.+.|+....+.| +
T Consensus 21 ~~i~V~~GdtV~f~~~~~------~H~v~~~~~----------~~-P~g-~-----------~~f~~~pg~t~s~TF--~ 69 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK------SHNVEAIKE----------IL-PEG-V-----------ESFKSKINESYTLTV--T 69 (123)
T ss_dssp SEEEECTTEEEEEEESST------TCCCEECTT----------SS-CTT-C-----------CCCBCCTTCCEEEEE--C
T ss_pred CEEEECCCCEEEEEECCC------CceEEEcCC----------cC-CCC-c-----------cceecCCCCEEEEEe--C
Confidence 347889999999998762 366554421 00 000 0 112234666555555 8
Q ss_pred CceeEEEEeehhHhHhccceEEEEEec
Q 036540 518 NPGVWFMHCHLELHTMWGLKMAFVVEN 544 (562)
Q Consensus 518 npG~w~~HCHil~H~d~GM~~~~~V~~ 544 (562)
.||.|.|+|- .|...||...+.|++
T Consensus 70 ~pG~y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 70 EPGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEESS
T ss_pred CCeEEEEEeC--CCCcCCcEEEEEECC
Confidence 9999999999 899999999999986
No 122
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.12 E-value=0.0018 Score=52.15 Aligned_cols=81 Identities=22% Similarity=0.287 Sum_probs=52.9
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEec
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRAD 517 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d 517 (562)
..+.++.|++|+|+ |.+ ...|-+.+.... + |+ ..+. .....+...+.|+....+.| +
T Consensus 18 ~~i~v~~GdtV~~~--n~~---~~~H~v~~~~~~----------~-p~----g~~~-~~~~~~~~~~~~g~~~~~tf--~ 74 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNA---GFPHNIVFDEDA----------V-PA----GVDA-DAISYDDYLNSKGETVVRKL--S 74 (98)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCEEEEECTTS----------S-CT----TCCH-HHHCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCEEEEEeCCC----------C-cc----cccc-ccccccccccCCCCEEEEEc--C
Confidence 34788999999996 533 456766554310 0 00 0000 00112346788888777755 8
Q ss_pred CceeEEEEeehhHhHhccceEEEEEe
Q 036540 518 NPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 518 npG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
.||.|.|+|-+ |...||...+.|+
T Consensus 75 ~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 75 TPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp SCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CCEEEEEEchh--hccCCCEEEEEEC
Confidence 99999999986 9999999999874
No 123
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=96.99 E-value=0.0025 Score=52.10 Aligned_cols=73 Identities=18% Similarity=0.192 Sum_probs=48.6
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEec
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRAD 517 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d 517 (562)
..+.++.|++|+|+ |.+ ...|.+++....- | . . .-++-.+.+|....+.| +
T Consensus 34 ~~i~V~~G~tV~~~--N~d---~~~H~v~~~~~~~-------~----~---~--------~~~s~~l~~g~~~~~tf--~ 84 (106)
T 1id2_A 34 PEVTIKAGETVYWV--NGE---VMPHNVAFKKGIV-------G----E---D--------AFRGEMMTKDQAYAITF--N 84 (106)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTTS-------S----S---S--------CEECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCcEEEEEeCCCC-------C----c---c--------cccccccCCCCEEEEEe--C
Confidence 34788999999987 643 4567776543210 0 0 0 01233466777666655 8
Q ss_pred CceeEEEEeehhHhHhccceEEEEEe
Q 036540 518 NPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 518 npG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
.||.|.|+|-+ |. ||...+.|+
T Consensus 85 ~~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 85 EAGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999987 76 999998874
No 124
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.86 E-value=0.0035 Score=53.44 Aligned_cols=73 Identities=18% Similarity=0.204 Sum_probs=49.4
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEec
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRAD 517 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d 517 (562)
..+.++.|++|+|+ |.+ ...|.+++.... .| . . .-++-.+.||....+.| +
T Consensus 60 ~~i~V~~GdtV~~~--N~d---~~~H~v~~~~~~-------~g----~----------~-~~~s~~l~pG~t~~~tF--~ 110 (132)
T 3c75_A 60 PEVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VG----E----------D-AFRGEMMTKDQAYAITF--N 110 (132)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SS----S----------S-CEECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCceEEEEeCCC-------CC----c----------c-cccccccCCCCEEEEEc--C
Confidence 34788999999987 643 456877764321 00 0 0 11233467777666665 8
Q ss_pred CceeEEEEeehhHhHhccceEEEEEe
Q 036540 518 NPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 518 npG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
.||.|.|||-+ |. ||...+.|+
T Consensus 111 ~~G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 111 EAGSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--Cc--CCEEEEEEC
Confidence 99999999987 76 999999874
No 125
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.53 E-value=0.0096 Score=49.98 Aligned_cols=37 Identities=16% Similarity=0.354 Sum_probs=29.8
Q ss_pred cCCCEEEEEEEecCceeEEEEeehhHhHhccceEEEEEecC
Q 036540 505 PTGGWTAIRFRADNPGVWFMHCHLELHTMWGLKMAFVVENG 545 (562)
Q Consensus 505 pp~g~~~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~~~ 545 (562)
.+|... .++++.||.|.|+|- .|...||...+.|.++
T Consensus 59 ~pG~t~--~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 59 KINENY--VLTVTQPGAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp CTTCCE--EEECCSCEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred CCCCEE--EEEeCCCEEEEEEeC--CcccCCCEEEEEEcCC
Confidence 456644 455589999999997 5999999999999863
No 126
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.50 E-value=0.0081 Score=50.44 Aligned_cols=38 Identities=26% Similarity=0.418 Sum_probs=30.3
Q ss_pred ecCCCEEEEEEEecCceeEEEEeehhHhHhccceEEEEEecC
Q 036540 504 VPTGGWTAIRFRADNPGVWFMHCHLELHTMWGLKMAFVVENG 545 (562)
Q Consensus 504 vpp~g~~~irf~~dnpG~w~~HCHil~H~d~GM~~~~~V~~~ 545 (562)
+.++.... ++++.||.|.|+|- .|...||...+.|.++
T Consensus 58 ~~pG~t~~--~tF~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 58 TTVGQEAV--VKFDKEGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp CCTTSCEE--EECCSCEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred cCCCCEEE--EEeCCCeEEEEEeC--CccccCCEEEEEEcCC
Confidence 34666544 45589999999998 5999999999999864
No 127
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.32 E-value=0.015 Score=60.92 Aligned_cols=79 Identities=18% Similarity=0.280 Sum_probs=60.6
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEec
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRAD 517 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d 517 (562)
..+.++.|+.|+|++.|........|.|.+.+... -+.+.||....+.|+++
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI----------------------------K~DaiPGrtnsvtFtad 609 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV----------------------------SMEISPQQTSSITFVAD 609 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------------------------EEEECTTCEEEEEEECC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc----------------------------eeeeCCCCeEEEEEEcC
Confidence 44689999999999999632225678877765422 13567788889999999
Q ss_pred CceeEEEEeehhHhH-hccceEEEEEec
Q 036540 518 NPGVWFMHCHLELHT-MWGLKMAFVVEN 544 (562)
Q Consensus 518 npG~w~~HCHil~H~-d~GM~~~~~V~~ 544 (562)
.||.|.++|...-|. +.+|...+.|++
T Consensus 610 kPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 610 KPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCEEEEEECCCcCCCCcccceEEEEEec
Confidence 999999999986554 368999998875
No 128
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.25 E-value=0.022 Score=48.52 Aligned_cols=74 Identities=16% Similarity=0.285 Sum_probs=53.1
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCCCceEEecCch-hhc-
Q 036540 61 PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHIL-WLR- 138 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~~-~~~- 138 (562)
..|.++.|++|++.+.|.. .. |++... .-|. ..-+.||+.-++.|+. +++|+|+|+|..- +..
T Consensus 60 ~~l~Vp~G~~V~~~vts~D-V~-----Hsf~ip----~~~~----k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD-VI-----HGFHVE----GTNI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS-SC-----EEEEET----TSSC----EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC-cc-----ceEEec----CCCc----eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc
Confidence 5899999999999999973 32 344332 1121 1346899988889987 8999999999541 112
Q ss_pred ccceeEEEEcC
Q 036540 139 ATVYGAIVIMP 149 (562)
Q Consensus 139 ~Gl~G~iiV~~ 149 (562)
.+|.|.++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 68999988863
No 129
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.02 E-value=0.045 Score=48.35 Aligned_cols=74 Identities=16% Similarity=0.280 Sum_probs=54.8
Q ss_pred ceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEeCCCCCceEEecCc-hhhc-
Q 036540 61 PTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNVTGQRGTLWWHAHI-LWLR- 138 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h~-~~~~- 138 (562)
..|.++.|++|++.++|. +.. |+..++.. |+ +.-+.||+.-++.|.+ +++|+|++.|.. -+..
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DVi-----Hsf~IP~l----gi----k~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~H 157 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVI-----HGFHVEGT----NI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 157 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSC-----EEEEETTS----SC----EEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTG
T ss_pred CEEEEeCCCeEEEEEecC-Cce-----EEEEECCC----Ce----EEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCc
Confidence 689999999999999997 333 33333211 11 1346799999999997 899999999984 3444
Q ss_pred ccceeEEEEcC
Q 036540 139 ATVYGAIVIMP 149 (562)
Q Consensus 139 ~Gl~G~iiV~~ 149 (562)
++|.|-++|++
T Consensus 158 s~M~g~V~V~e 168 (168)
T 3s8f_B 158 QNMFGTIVVKE 168 (168)
T ss_dssp GGCEEEEEEEC
T ss_pred CCCEEEEEEeC
Confidence 89999999873
No 130
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.65 E-value=0.027 Score=49.71 Aligned_cols=44 Identities=11% Similarity=0.138 Sum_probs=39.1
Q ss_pred cceeeecCCCEEEEEEEec--CceeEEEEeehhHhHhccceEEEEEe
Q 036540 499 RNTVGVPTGGWTAIRFRAD--NPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 499 rDTv~vpp~g~~~irf~~d--npG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
..+..|.||....|.|.++ .||.|-|+|-+--|.. ||-..|.|.
T Consensus 121 ~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 121 AHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp EECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred ccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 3466789999999999988 8999999999999998 899999886
No 131
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.64 E-value=0.064 Score=45.24 Aligned_cols=90 Identities=14% Similarity=0.164 Sum_probs=61.0
Q ss_pred eEEeecC-CEEEEEEEeCCCCC--CCCCCeeecCCCeEEEEecC-----------C---CCCCCCCCCCCCCCCCCccce
Q 036540 439 LSKVAFN-STIELVLQDTNLLT--VESHPFHLHGYNFFVVGSGI-----------G---NFDPKKDPAKFNLVDPPERNT 501 (562)
Q Consensus 439 ~~~~~~g-~~ve~~l~n~~~~~--~~~HP~HlHG~~F~vl~~g~-----------g---~~~~~~~~~~~~~~~p~~rDT 501 (562)
-+.++.| +.|.+++.|.+..+ .+.|- |.+...+. | .|-+.. ..-....+
T Consensus 19 ~i~V~~G~~~vtv~~~N~g~~~~~~m~H~-------~vi~~~~~~~~~~~~~m~~~~~~~~v~~~-------~~~~~~~t 84 (129)
T 1cuo_A 19 SISVPASCAEFTVNFEHKGHMPKTGMGHN-------WVLAKSADVGDVAKEGAHAGADNNFVTPG-------DKRVIAFT 84 (129)
T ss_dssp EEEEETTCSEEEEEEEECSSSCHHHHCBC-------CEEEEGGGHHHHHHHHHTTCGGGTTSCTT-------CTTCSEEC
T ss_pred eEEEcCCCeEEEEEEEECCCCcccccccc-------eEEecCcchhhhHHHhhhccccccccccc-------cccceeee
Confidence 3688999 99999999965211 12344 44443320 0 010100 01112356
Q ss_pred eeecCCCEEEEEEEec---CceeEEEEeehhHhHhccceEEEEEe
Q 036540 502 VGVPTGGWTAIRFRAD---NPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 502 v~vpp~g~~~irf~~d---npG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
..|.||....|.|.++ .||.|-|.|-+--|.. ||-..+.|+
T Consensus 85 ~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 85 PIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred eEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 6788999999999997 9999999999999988 899999886
No 132
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.60 E-value=0.056 Score=46.05 Aligned_cols=70 Identities=23% Similarity=0.321 Sum_probs=51.2
Q ss_pred EEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEecCc
Q 036540 440 SKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRADNP 519 (562)
Q Consensus 440 ~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnp 519 (562)
+.++.|+.|+|++.|. +..|.| .|-+.+ --+.+.||....+.|+++.|
T Consensus 62 l~Vp~G~~V~~~vts~----DV~Hsf-------~ip~~~---------------------~k~d~~PG~~~~~~~~~~~~ 109 (135)
T 2cua_A 62 IEVPQGAEIVFKITSP----DVIHGF-------HVEGTN---------------------INVEVLPGEVSTVRYTFKRP 109 (135)
T ss_dssp EEEETTSEEEEEEEBS----SSCEEE-------EETTSS---------------------CEEEECBTBCEEEEEECCSC
T ss_pred EEEcCCCEEEEEEEeC----CccceE-------EecCCC---------------------ceeEeCCCCcEEEEEEcCCC
Confidence 6789999999999884 234444 321110 01445677778899999999
Q ss_pred eeEEEEeeh---hHhHhccceEEEEEe
Q 036540 520 GVWFMHCHL---ELHTMWGLKMAFVVE 543 (562)
Q Consensus 520 G~w~~HCHi---l~H~d~GM~~~~~V~ 543 (562)
|.|.++|.. ..| .+|-..+.|.
T Consensus 110 G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 110 GEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred EEEEEECcccCCCCc--CCCEEEEEEE
Confidence 999999987 667 5899888875
No 133
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.36 E-value=0.051 Score=45.44 Aligned_cols=73 Identities=16% Similarity=0.165 Sum_probs=46.1
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEec
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRAD 517 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d 517 (562)
..+.++.|++|.|+..+ . .|-+++... .+... . ..+.+.++....+. ++
T Consensus 21 ~~i~V~~GdtV~f~n~d-----~-~H~v~~~~~----------~~p~~--~-----------~~~~~~~g~t~~~t--F~ 69 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPTD-----K-GHNVETIKG----------MIPDG--A-----------EAFKSKINENYKVT--FT 69 (122)
T ss_dssp SEEEECTTEEEEEEESS-----S-SCCCEECTT----------CSCTT--C-----------CCCBCCTTCCEEEE--EC
T ss_pred CEEEECCCCEEEEEECC-----C-CcEEEEccc----------ccCCC--c-----------ceeecCCCCEEEEE--eC
Confidence 34688999999987432 2 466665531 11000 0 01123456655444 48
Q ss_pred CceeEEEEeehhHhHhccceEEEEEecC
Q 036540 518 NPGVWFMHCHLELHTMWGLKMAFVVENG 545 (562)
Q Consensus 518 npG~w~~HCHil~H~d~GM~~~~~V~~~ 545 (562)
.||.|.|+|-+ |.. |...+.|.+.
T Consensus 70 ~~G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 70 APGVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp SCEEEEEEETT--EEE--EEEEEEESSS
T ss_pred CCEEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 99999999987 766 9999999863
No 134
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.22 E-value=0.15 Score=42.79 Aligned_cols=43 Identities=16% Similarity=0.234 Sum_probs=38.1
Q ss_pred ceeeecCCCEEEEEEEec--Ccee-EEEEeehhHhHhccceEEEEEe
Q 036540 500 NTVGVPTGGWTAIRFRAD--NPGV-WFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 500 DTv~vpp~g~~~irf~~d--npG~-w~~HCHil~H~d~GM~~~~~V~ 543 (562)
.|..|.||....|.|.+. .+|. |-|.|-+--|.. ||-..+.|.
T Consensus 82 ~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 82 HTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp ECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred cceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 466789999999999998 8995 999999999998 999999885
No 135
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=93.42 E-value=0.31 Score=40.95 Aligned_cols=43 Identities=16% Similarity=0.270 Sum_probs=37.4
Q ss_pred ceeeecCCCEEEEEEEec--Ccee-EEEEeehhHhHhccceEEEEEe
Q 036540 500 NTVGVPTGGWTAIRFRAD--NPGV-WFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 500 DTv~vpp~g~~~irf~~d--npG~-w~~HCHil~H~d~GM~~~~~V~ 543 (562)
.|-.|.||....|.|.+. .+|. |-|.|-+--|.. ||-..+.|.
T Consensus 83 ~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 83 HTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp ECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred eeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 455689999999999997 7876 999999999998 899988773
No 136
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=93.32 E-value=0.3 Score=41.09 Aligned_cols=43 Identities=16% Similarity=0.236 Sum_probs=37.6
Q ss_pred ceeeecCCCEEEEEEEec--Ccee-EEEEeehhHhHhccceEEEEEe
Q 036540 500 NTVGVPTGGWTAIRFRAD--NPGV-WFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 500 DTv~vpp~g~~~irf~~d--npG~-w~~HCHil~H~d~GM~~~~~V~ 543 (562)
.+..|.||....|-|.++ .+|. |-|.|-+--|.. ||-..+.|.
T Consensus 83 ~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 83 HTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp ECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 455789999999999998 7866 999999999998 899999885
No 137
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=93.15 E-value=0.41 Score=42.16 Aligned_cols=72 Identities=22% Similarity=0.313 Sum_probs=54.1
Q ss_pred EEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEecCc
Q 036540 440 SKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRADNP 519 (562)
Q Consensus 440 ~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~dnp 519 (562)
+.++.|+.|++.+.|. +..|.|-+=.... -+.+.||....+.|+++.|
T Consensus 95 l~VP~G~~Vr~~vTS~----DViHsf~IP~lgi----------------------------k~da~PG~~n~~~~~~~kp 142 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP----DVIHGFHVEGTNI----------------------------NVEVLPGEVSTVRYTFKRP 142 (168)
T ss_dssp EEEETTSEEEEEEECS----SSCEEEEETTSSC----------------------------EEEECTTBCEEEEEECCSC
T ss_pred EEEeCCCeEEEEEecC----CceEEEEECCCCe----------------------------EEEecCCceeEEEEEeCCC
Confidence 6789999999999984 4556665432211 2345577778899999999
Q ss_pred eeEEEEeeh-hHhHhccceEEEEEe
Q 036540 520 GVWFMHCHL-ELHTMWGLKMAFVVE 543 (562)
Q Consensus 520 G~w~~HCHi-l~H~d~GM~~~~~V~ 543 (562)
|.|.+.|.. --+-+.+|...+.|+
T Consensus 143 G~y~g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 143 GEYRIICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEE
T ss_pred EEEEEECCcCCCCCcCCCEEEEEEe
Confidence 999999985 445667999999886
No 138
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=91.46 E-value=0.92 Score=37.65 Aligned_cols=95 Identities=14% Similarity=0.187 Sum_probs=57.0
Q ss_pred EEeec-CCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCC-CC--CC-CCCC-CCC-C-CCCCCccceeeecCCCEEE
Q 036540 440 SKVAF-NSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIG-NF--DP-KKDP-AKF-N-LVDPPERNTVGVPTGGWTA 511 (562)
Q Consensus 440 ~~~~~-g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g-~~--~~-~~~~-~~~-~-~~~p~~rDTv~vpp~g~~~ 511 (562)
+.++. |+.|+++|.|.+.+ |--.=||.|.+...+.- .. +. ...+ ..| . -.....-.|..|.||....
T Consensus 20 i~V~~~Ge~V~~~l~N~G~~-----p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~ 94 (125)
T 3fsa_A 20 ITVDKSCKQFTVNLSHPGNL-----PKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDS 94 (125)
T ss_dssp EEECTTCSEEEEEEECCSSC-----CHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEE
T ss_pred EEEecCCCEEEEEEEECCcc-----cccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEE
Confidence 67765 99999999997632 11111344544432100 00 00 0000 011 0 0122445677899999999
Q ss_pred EEEEec---CceeEEEEeehhHhHhccceEEEEEe
Q 036540 512 IRFRAD---NPGVWFMHCHLELHTMWGLKMAFVVE 543 (562)
Q Consensus 512 irf~~d---npG~w~~HCHil~H~d~GM~~~~~V~ 543 (562)
|-|.+. .+|.|-|-|- -|. ||-..+.|.
T Consensus 95 vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 95 VTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 999997 8999999999 888 999998773
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=89.72 E-value=2.9 Score=34.39 Aligned_cols=71 Identities=14% Similarity=0.175 Sum_probs=52.7
Q ss_pred cCcEE--EEEEEecCCCCeEEEEEc-CcceEEEEeC--CCcc--------CceEEeEEEeCCCceEEEEEEeCC--CCCe
Q 036540 220 SGKTY--LLRIVNAALNDELFFAIA-GHNMTVVEID--AVYT--------KPFTTQAILIAPGQTTNVLVKADQ--SPSR 284 (562)
Q Consensus 220 ~G~~~--rlRliN~~~~~~~~~~l~-gh~~~via~D--G~~~--------~p~~~d~v~l~pgeR~dv~v~~~~--~~G~ 284 (562)
.|+.+ .|.+.|.+ .....+.+. |+.+.++-.| |..+ .........|.|||...+-.+.++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s-~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQS-ERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECS-SSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCC-CCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 44444 57888999 778888876 6766666554 6544 134567899999999999999995 4799
Q ss_pred EEEEEee
Q 036540 285 YFMAARP 291 (562)
Q Consensus 285 ~~i~~~~ 291 (562)
|.+++..
T Consensus 95 Ytl~a~l 101 (120)
T 3isy_A 95 YEVKVTF 101 (120)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=86.45 E-value=4.6 Score=36.50 Aligned_cols=61 Identities=11% Similarity=0.167 Sum_probs=47.7
Q ss_pred EEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccCceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecCC
Q 036540 215 AMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTKPFTTQAILIAPGQTTNVLVKADQSPSRYFMAARPFMD 294 (562)
Q Consensus 215 ~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~ 294 (562)
.+.++.|+.+||+|.+.. -.|.|.|.....++ ...||..-.+.+.+++ +|.|+.+|.-++.
T Consensus 42 ~l~lP~g~~V~~~lTS~D--ViHSF~IP~lgvK~----------------daiPGr~n~l~~~~~~-pG~y~g~CsE~CG 102 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNS--VMHSFFIPRLGSQI----------------YAMAGMQTRLHLIANE-PGTYDGICAEICG 102 (205)
T ss_dssp EEEEETTSCEEEEEEESS--SCEEEEEGGGTEEE----------------EECTTCCEEEEECCSS-SEEEEEEECSCCS
T ss_pred eEEEeCCCEEEEEEecCC--ceeeEEecccCcEE----------------EecCCceEEEEEEeCC-CeEEEEEcccccc
Confidence 589999999999999764 56777777555443 4458888888888888 7999999986543
No 141
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=79.97 E-value=22 Score=29.10 Aligned_cols=71 Identities=10% Similarity=0.154 Sum_probs=46.3
Q ss_pred EEEcCcCCCceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCc---ccccccCCCCeEEEEEEeCC--CCC
Q 036540 52 VTVNGMFPGPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAY---ITQCPIKTGNSYTYDFNVTG--QRG 126 (562)
Q Consensus 52 ~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~---~t~~~i~pG~~~~y~~~~~~--~~G 126 (562)
...|-+--.=+|+...|.+..+.|.+...+ ..| .|+||-.. +....|+||++.+|+...++ .+|
T Consensus 25 tv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG 93 (120)
T 3isy_A 25 SLKNQSERAIEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPG 93 (120)
T ss_dssp EEEECSSSCEEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSE
T ss_pred EEEcCCCCcEEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCCCCCc
Confidence 334443323577788888888888875331 222 45777443 33456999999999999852 589
Q ss_pred ceEEecC
Q 036540 127 TLWWHAH 133 (562)
Q Consensus 127 t~wyH~h 133 (562)
+|..+.=
T Consensus 94 ~Ytl~a~ 100 (120)
T 3isy_A 94 TYEVKVT 100 (120)
T ss_dssp EEEEEEE
T ss_pred cEEEEEE
Confidence 9877643
No 142
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=74.85 E-value=13 Score=35.16 Aligned_cols=62 Identities=16% Similarity=0.254 Sum_probs=47.9
Q ss_pred eEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccCceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecC
Q 036540 214 FAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTKPFTTQAILIAPGQTTNVLVKADQSPSRYFMAARPFM 293 (562)
Q Consensus 214 ~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~ 293 (562)
..+.++.|+.+|+++.+.. -.|.|.+.....++ ..-||..-.+.+.+++ ||.|...|..++
T Consensus 171 n~l~lP~g~~v~~~~tS~D--ViHsf~ip~l~~k~----------------da~PG~~n~~~~~~~~-~G~y~g~Cse~C 231 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD--VIHSWTVPAFGVKQ----------------DAVPGRLAQLWFRAER-EGIFFGQCSELC 231 (262)
T ss_dssp SCEEEETTSEEEEEEEESS--SCEEEEEGGGTEEE----------------EECBTCCEEEEEECCS-CEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEECc--ccceeeecccCceE----------------EecCCceeEEEEecCC-cEEEEEEChHhc
Confidence 3589999999999998664 56777777655444 3448888888898888 799999998654
Q ss_pred C
Q 036540 294 D 294 (562)
Q Consensus 294 ~ 294 (562)
.
T Consensus 232 G 232 (262)
T 2gsm_B 232 G 232 (262)
T ss_dssp S
T ss_pred c
Confidence 3
No 143
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=74.46 E-value=15 Score=35.25 Aligned_cols=62 Identities=18% Similarity=0.257 Sum_probs=48.4
Q ss_pred eEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccCceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecC
Q 036540 214 FAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTKPFTTQAILIAPGQTTNVLVKADQSPSRYFMAARPFM 293 (562)
Q Consensus 214 ~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~ 293 (562)
..+.++.|+.+||++.+.. -.|.|.+.....++ ..-||..-.+.+.+++ ||.|+.+|..++
T Consensus 189 N~lvlP~g~~V~~~ltS~D--ViHsf~iP~lg~k~----------------daiPG~~n~~~~~~~~-~G~y~g~CsE~C 249 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD--VIHAWTIPAFAVKQ----------------DAVPGRIAQLWFSVDQ-EGVYFGQCSELC 249 (298)
T ss_dssp SCEEEESSSEEEEEEEESS--SCEEEEEGGGTEEE----------------EECTTCCEEEEEECSS-SEEEEECCCSCC
T ss_pred ceEEEEcCCEEEEEEEeCC--ccceeeEcccCceE----------------EecCCceEEEEEEeCC-CEEEEEEccccc
Confidence 4689999999999999854 56777776655444 3458888889999888 799999998654
Q ss_pred C
Q 036540 294 D 294 (562)
Q Consensus 294 ~ 294 (562)
.
T Consensus 250 G 250 (298)
T 3hb3_B 250 G 250 (298)
T ss_dssp S
T ss_pred C
Confidence 3
No 144
>2pq4_B Periplasmic nitrate reductase precursor; NAPD/NAPA1-35, mixed beta-alpha sandwich structure, protein- peptide complex, alpha-helix; NMR {Escherichia coli}
Probab=73.83 E-value=2.1 Score=26.78 Aligned_cols=19 Identities=11% Similarity=-0.043 Sum_probs=14.1
Q ss_pred chhHHHHHHHHHHHHhhhc
Q 036540 4 QHRRHLVLLLTIFYFLGFL 22 (562)
Q Consensus 4 ~~~r~~~~~~~~~~~~~~~ 22 (562)
.+||+||++.+++.+++.+
T Consensus 3 lsRR~FLK~~aaa~Aaaaa 21 (35)
T 2pq4_B 3 LSRRSFMKANAVAAAAAAA 21 (35)
T ss_dssp CCSHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHh
Confidence 5899999987766655544
No 145
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=62.89 E-value=25 Score=32.29 Aligned_cols=62 Identities=10% Similarity=0.134 Sum_probs=47.0
Q ss_pred eEEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccCceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecC
Q 036540 214 FAMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTKPFTTQAILIAPGQTTNVLVKADQSPSRYFMAARPFM 293 (562)
Q Consensus 214 ~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~ 293 (562)
..+.++.|+.+|+++.++. -.|.|.+.....++ ..-||..-.+.+.+++ ||.|+.+|..++
T Consensus 140 n~lvlP~~~~Vr~~vtS~D--ViHsf~vP~lg~K~----------------DaiPGr~n~~~~~~~~-~G~y~g~Cse~C 200 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED--VLHSWAVPSLGLKT----------------DAIPGRLNQTTLMSSR-PGLYYGQCSEIC 200 (227)
T ss_dssp SCEEEETTSCEEEEEEESS--SCEEEEEGGGTEEE----------------EECTTCCEEEEECCSS-CEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEeCc--ccceeeecccCcEE----------------EecCCceEEEEEecCC-cEEEEEEehhhc
Confidence 4589999999999998754 56777776655444 3347888888888888 799999997554
Q ss_pred C
Q 036540 294 D 294 (562)
Q Consensus 294 ~ 294 (562)
.
T Consensus 201 G 201 (227)
T 1v54_B 201 G 201 (227)
T ss_dssp S
T ss_pred c
Confidence 3
No 146
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=52.54 E-value=44 Score=26.96 Aligned_cols=48 Identities=21% Similarity=0.390 Sum_probs=31.5
Q ss_pred cEEEEEEEecCCCC-eEEEEEcCc-ceEEEEeCCCccCceEEeEEEeCCCceEEEEEEeC
Q 036540 222 KTYLLRIVNAALND-ELFFAIAGH-NMTVVEIDAVYTKPFTTQAILIAPGQTTNVLVKAD 279 (562)
Q Consensus 222 ~~~rlRliN~~~~~-~~~~~l~gh-~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~ 279 (562)
-.|+|+|+|.+... .+.+.+.|. .++++ | +. .+.+.||+..++-|...
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~~---~i~v~~g~~~~~~v~v~ 82 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----KQ---TIQVEPGEVLNLPMSLG 82 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEE---S----CC---EEEECTTCEEEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEe---C----CC---cEEECCCCEEEEEEEEE
Confidence 36899999999443 556666663 24432 2 11 49999999777666543
No 147
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=52.39 E-value=17 Score=35.23 Aligned_cols=61 Identities=11% Similarity=0.188 Sum_probs=46.5
Q ss_pred EEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccCceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecCC
Q 036540 215 AMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTKPFTTQAILIAPGQTTNVLVKADQSPSRYFMAARPFMD 294 (562)
Q Consensus 215 ~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~~ 294 (562)
.+.+..|+.+||++... +-.|.|.+.....++ ..-||..-.+.+.+++ ||.|+.+|..++.
T Consensus 152 ~l~lP~g~~V~~~lTS~--DViHsf~IP~lg~k~----------------DaiPGr~n~~~~~~~~-~G~y~g~CsE~CG 212 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSN--SVMNSFFIPRLGSQI----------------YAMAGMQTRLHLIANE-PGTYDGISASYSG 212 (315)
T ss_dssp BCCCCSSSEEEEEECBS--SSCEEEEEGGGTEEE----------------EECBTSCEEEEEECCS-CBCCEEBCCSCCS
T ss_pred eEEEeCCCEEEEEEEeC--CccceeeecccCcEE----------------eecCCcceeeEEecCC-CeEEEEeccccch
Confidence 57899999999999755 456777776555444 3458888888898888 7999999975543
No 148
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=51.98 E-value=41 Score=32.25 Aligned_cols=76 Identities=13% Similarity=0.188 Sum_probs=53.6
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEec
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRAD 517 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d 517 (562)
+-+.++.|+.|++.+.+. +..|.|.+=.... -+.+-||-...+.|.++
T Consensus 189 N~lvlP~g~~V~~~ltS~----DViHsf~iP~lg~----------------------------k~daiPG~~n~~~~~~~ 236 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT----DVIHAWTIPAFAV----------------------------KQDAVPGRIAQLWFSVD 236 (298)
T ss_dssp SCEEEESSSEEEEEEEES----SSCEEEEEGGGTE----------------------------EEEECTTCCEEEEEECS
T ss_pred ceEEEEcCCEEEEEEEeC----CccceeeEcccCc----------------------------eEEecCCceEEEEEEeC
Confidence 447899999999999984 4556665432211 12334566778999999
Q ss_pred CceeEEEEeehhH-hHhccceEEEEEecC
Q 036540 518 NPGVWFMHCHLEL-HTMWGLKMAFVVENG 545 (562)
Q Consensus 518 npG~w~~HCHil~-H~d~GM~~~~~V~~~ 545 (562)
.||.|...|...- .-+..|-..++|.+.
T Consensus 237 ~~G~y~g~CsE~CG~~Hs~M~~~v~vvs~ 265 (298)
T 3hb3_B 237 QEGVYFGQCSELCGINHAYMPIVVKAVSQ 265 (298)
T ss_dssp SSEEEEECCCSCCSTTTTSCCEEEEEECH
T ss_pred CCEEEEEEcccccCcCccCCeeEEEEEcH
Confidence 9999999998654 344667777777643
No 149
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=50.28 E-value=36 Score=30.58 Aligned_cols=74 Identities=16% Similarity=0.200 Sum_probs=51.4
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEec
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRAD 517 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d 517 (562)
+-+.++.|+.|++.|.+. +..|.|-+= +-+ =-+.+-||-...+.|.++
T Consensus 41 n~l~lP~g~~V~~~lTS~----DViHSF~IP-------~lg---------------------vK~daiPGr~n~l~~~~~ 88 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN----SVMHSFFIP-------RLG---------------------SQIYAMAGMQTRLHLIAN 88 (205)
T ss_dssp SEEEEETTSCEEEEEEES----SSCEEEEEG-------GGT---------------------EEEEECTTCCEEEEECCS
T ss_pred ceEEEeCCCEEEEEEecC----CceeeEEec-------ccC---------------------cEEEecCCceEEEEEEeC
Confidence 347889999999999984 445555443 221 012334566778899999
Q ss_pred CceeEEEEeehhHhHh-ccceEEEEEe
Q 036540 518 NPGVWFMHCHLELHTM-WGLKMAFVVE 543 (562)
Q Consensus 518 npG~w~~HCHil~H~d-~GM~~~~~V~ 543 (562)
.||.|...|-..-... ..|-..++|.
T Consensus 89 ~pG~y~g~CsE~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 89 EPGTYDGICAEICGPGHSGMKFKAIAT 115 (205)
T ss_dssp SSEEEEEEECSCCSTTSTTCCEEEEEE
T ss_pred CCeEEEEEcccccccchhhceEEEEEE
Confidence 9999999998765443 4566777766
No 150
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=49.04 E-value=55 Score=31.93 Aligned_cols=16 Identities=25% Similarity=0.519 Sum_probs=14.3
Q ss_pred ccccCCCCeEEEEEEe
Q 036540 106 QCPIKTGNSYTYDFNV 121 (562)
Q Consensus 106 ~~~i~pG~~~~y~~~~ 121 (562)
..||+|||+.+.+..+
T Consensus 319 ~~pI~PGETr~~~v~a 334 (382)
T 1yew_A 319 NSPLAPGETRTVDVTA 334 (382)
T ss_dssp CSCBCTTCEEEEEEEE
T ss_pred CCCcCCCceeEEEEEe
Confidence 3689999999999888
No 151
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=48.99 E-value=21 Score=28.22 Aligned_cols=53 Identities=15% Similarity=0.090 Sum_probs=35.0
Q ss_pred EEEEEEEeCCCCC---ceEEecCccccCCCCCCCCCcccccccCCCCeEEEEEEe-CCCCCce
Q 036540 70 RVLINVTNHAQYN---MSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTYDFNV-TGQRGTL 128 (562)
Q Consensus 70 ~v~i~~~N~l~~~---~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y~~~~-~~~~Gt~ 128 (562)
.+.|.|.|-|+.+ ..++..|.-... + -.+....|.||++..+++.. +..+|..
T Consensus 23 ~v~vsf~NPL~~~L~~c~~~vEG~GL~~-----~-~~~~~~~v~pg~~~~~~~~~~P~~~G~~ 79 (102)
T 2xzz_A 23 EVQIVFKNPLPVTLTNVVFRLEGSGLQR-----P-KILNVGDIGGNETVTLRQSFVPVRPGPR 79 (102)
T ss_dssp EEEEEEECCSSSCBCSEEEEEEETTTEE-----E-EEEEECCBCTTCEEEEEEEECCCSCSSC
T ss_pred EEEEEEECCCCCcccCEEEEEECCCCCc-----c-eEEEcCcCCCCCEEEEEEEEecCcccce
Confidence 6788999999865 456666543311 1 01112469999999999988 6667753
No 152
>4aay_B AROB; oxidoreductase, rieske, iron sulfur, molybdopterin; HET: MGD; 2.70A {Rhizobium species}
Probab=45.64 E-value=4.4 Score=35.81 Aligned_cols=23 Identities=13% Similarity=-0.115 Sum_probs=0.0
Q ss_pred CccchhHHHHHHHHHHHHhhhcc
Q 036540 1 MAMQHRRHLVLLLTIFYFLGFLS 23 (562)
Q Consensus 1 ~~~~~~r~~~~~~~~~~~~~~~~ 23 (562)
|.+++||+||+++++++++++++
T Consensus 7 ~~~~~rr~fl~~~~~a~~~~~~~ 29 (175)
T 4aay_B 7 MVDIGRRQFLRGGALAAAGATAA 29 (175)
T ss_dssp -----------------------
T ss_pred hccccHHHHhhhhHHhhhheeEe
Confidence 56899999999766655544443
No 153
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=43.54 E-value=62 Score=30.33 Aligned_cols=75 Identities=16% Similarity=0.256 Sum_probs=51.5
Q ss_pred eeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEec
Q 036540 438 RLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRAD 517 (562)
Q Consensus 438 ~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~d 517 (562)
+-+.++.|+.|++.+.+. +..|.|-+=.... -+.+-||-...+.|.++
T Consensus 171 n~l~lP~g~~v~~~~tS~----DViHsf~ip~l~~----------------------------k~da~PG~~n~~~~~~~ 218 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA----DVIHSWTVPAFGV----------------------------KQDAVPGRLAQLWFRAE 218 (262)
T ss_dssp SCEEEETTSEEEEEEEES----SSCEEEEEGGGTE----------------------------EEEECBTCCEEEEEECC
T ss_pred ceEEEecCCEEEEEEEEC----cccceeeecccCc----------------------------eEEecCCceeEEEEecC
Confidence 347889999999999984 4456555432211 12233566677899999
Q ss_pred CceeEEEEeehhHhH-hccceEEEEEec
Q 036540 518 NPGVWFMHCHLELHT-MWGLKMAFVVEN 544 (562)
Q Consensus 518 npG~w~~HCHil~H~-d~GM~~~~~V~~ 544 (562)
.||.|...|...--. +..|-..++|.+
T Consensus 219 ~~G~y~g~Cse~CG~~H~~M~~~v~vv~ 246 (262)
T 2gsm_B 219 REGIFFGQCSELCGISHAYMPITVKVVS 246 (262)
T ss_dssp SCEEEEECCCSCCSTTGGGCCEEEEEEC
T ss_pred CcEEEEEEChHhcccCcccCeEEEEEEc
Confidence 999999999865433 345666676664
No 154
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=38.80 E-value=53 Score=27.03 Aligned_cols=69 Identities=19% Similarity=0.310 Sum_probs=40.3
Q ss_pred EEEcCcCCCceEEEecCCEEEEEEEeCCC---CC--ceEEe--cCccccC-CCCCCCCCcccccccCCCCeEEEEEEe
Q 036540 52 VTVNGMFPGPTIYIREGDRVLINVTNHAQ---YN--MSIHW--HGLKQYR-NGWADGPAYITQCPIKTGNSYTYDFNV 121 (562)
Q Consensus 52 ~~~Ng~~pgP~i~v~~Gd~v~i~~~N~l~---~~--~siH~--HG~~~~~-~~~~DGv~~~t~~~i~pG~~~~y~~~~ 121 (562)
..++|--+.+.=.++.|..+.|.+.=..+ .. +.+|+ .|+..+. ....|+=-+ ..|||.+|+.++|.+..
T Consensus 16 V~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~-~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 16 VMVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHF-MKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp EEETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGT-SCSSBCTTCEEEEEEEE
T ss_pred EEECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCC-ccCcccCCEEEEEEEEe
Confidence 45555412345678889988877762222 22 23332 3555432 112455322 57999999999999776
No 155
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=38.52 E-value=56 Score=26.57 Aligned_cols=59 Identities=20% Similarity=0.273 Sum_probs=36.8
Q ss_pred eEEEecC-CEEEEEEEeCCCCCce--EEecCccccCCCCCC-----C----CCcccccccCCCCeEEEEEE
Q 036540 62 TIYIREG-DRVLINVTNHAQYNMS--IHWHGLKQYRNGWAD-----G----PAYITQCPIKTGNSYTYDFN 120 (562)
Q Consensus 62 ~i~v~~G-d~v~i~~~N~l~~~~s--iH~HG~~~~~~~~~D-----G----v~~~t~~~i~pG~~~~y~~~ 120 (562)
.|++++| +++.|.|.|..+++.- -|+|=..+.+.-.-| | .|.-|.....||++.+.+..
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 5788888 5899999999988754 466655443321111 1 22223345678887777664
No 156
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=38.52 E-value=56 Score=26.57 Aligned_cols=59 Identities=20% Similarity=0.273 Sum_probs=36.8
Q ss_pred eEEEecC-CEEEEEEEeCCCCCce--EEecCccccCCCCCC-----C----CCcccccccCCCCeEEEEEE
Q 036540 62 TIYIREG-DRVLINVTNHAQYNMS--IHWHGLKQYRNGWAD-----G----PAYITQCPIKTGNSYTYDFN 120 (562)
Q Consensus 62 ~i~v~~G-d~v~i~~~N~l~~~~s--iH~HG~~~~~~~~~D-----G----v~~~t~~~i~pG~~~~y~~~ 120 (562)
.|++++| +++.|.|.|..+++.- -|+|=..+.+.-.-| | .|.-|.....||++.+.+..
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 5788888 5899999999988754 466655443321111 1 22223345678887777664
No 157
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=38.03 E-value=47 Score=27.35 Aligned_cols=69 Identities=25% Similarity=0.334 Sum_probs=40.3
Q ss_pred EEEcCcCCCceEEEecCCEEEEEEE---eCCCCCc--eEEe--cCccccC-CCCCCCCCcccccccCCCCeEEEEEEe
Q 036540 52 VTVNGMFPGPTIYIREGDRVLINVT---NHAQYNM--SIHW--HGLKQYR-NGWADGPAYITQCPIKTGNSYTYDFNV 121 (562)
Q Consensus 52 ~~~Ng~~pgP~i~v~~Gd~v~i~~~---N~l~~~~--siH~--HG~~~~~-~~~~DGv~~~t~~~i~pG~~~~y~~~~ 121 (562)
..++|- +.+.=.++.|..+.|.+. |...... .+|+ .|+..+. .+..|+-..-..|||.+|+.++|.+.+
T Consensus 18 V~V~~C-~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~l 94 (130)
T 1nep_A 18 VNVSPC-PTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKL 94 (130)
T ss_dssp EEEESC-SSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEE
T ss_pred EEECCC-CCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEe
Confidence 455553 235567788888887776 2222222 2332 3554431 222455422247999999999999877
No 158
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=34.53 E-value=85 Score=24.21 Aligned_cols=68 Identities=10% Similarity=0.041 Sum_probs=35.9
Q ss_pred EEecCcEEEEEEEecCCCCeEEEEEcCc--ceEEEEeCCCccCceEEeEEEeCCCceEEEEEEeCCC--CCeEEEEEe
Q 036540 217 EVESGKTYLLRIVNAALNDELFFAIAGH--NMTVVEIDAVYTKPFTTQAILIAPGQTTNVLVKADQS--PSRYFMAAR 290 (562)
Q Consensus 217 ~v~~G~~~rlRliN~~~~~~~~~~l~gh--~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~--~G~~~i~~~ 290 (562)
.-++||++++|++-.... ..+. .+- .+++..-+|..+ ..-.........++..+..+.. .|.|.|++.
T Consensus 12 iYrPGetV~~~~~~~~~~-~~p~--~~~~~~v~l~dp~g~~v---~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~ 83 (102)
T 2p9r_A 12 IYKPGQTVKFRVVSMDEN-FHPL--NELIPLVYIQDPKGNRI---AQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQ 83 (102)
T ss_dssp EECTTCEEEEEEEEECGG-GCBC--CCEEEEEEEECTTSCEE---EEEEEEECBTTEEEEEEECCSSCCCEEEEEEEE
T ss_pred ccCCCCEEEEEEEEECCC-CcCC--CCCceEEEEECCCCCEE---EEEEeecCCCCEEEEEEECCCCCCCeeEEEEEE
Confidence 367999999998755421 1111 111 234444444421 1111222334556666666653 499999886
No 159
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=32.30 E-value=40 Score=27.83 Aligned_cols=45 Identities=18% Similarity=0.304 Sum_probs=25.6
Q ss_pred EEEEEeCCCCCc---eEEecCcc-----ccCCCCCCCCCcccccccCCCCeEEEEE
Q 036540 72 LINVTNHAQYNM---SIHWHGLK-----QYRNGWADGPAYITQCPIKTGNSYTYDF 119 (562)
Q Consensus 72 ~i~~~N~l~~~~---siH~HG~~-----~~~~~~~DGv~~~t~~~i~pG~~~~y~~ 119 (562)
+|++.|....+. +=||.=.. .... -+||-|- |.-|.||++|+|.=
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~--G~GVVG~-qP~L~PGe~f~YtS 86 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVD--GEGVVGE-QPWLRPGEAFHYTS 86 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEE--ESSBTTB-CCEECTTCEEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEE--CCCeecC-CCcCCCCCceEEeC
Confidence 566677776553 44664222 1111 3554332 45689999888864
No 160
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=31.79 E-value=1e+02 Score=28.16 Aligned_cols=76 Identities=9% Similarity=0.204 Sum_probs=50.9
Q ss_pred eeeEEeecCCEEEEEEEeCCCCCCCCCCeeecCCCeEEEEecCCCCCCCCCCCCCCCCCCCccceeeecCCCEEEEEEEe
Q 036540 437 TRLSKVAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDPKKDPAKFNLVDPPERNTVGVPTGGWTAIRFRA 516 (562)
Q Consensus 437 ~~~~~~~~g~~ve~~l~n~~~~~~~~HP~HlHG~~F~vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~~~irf~~ 516 (562)
.+.+.++.|+.|++.+.+. +..|.|-+=.... ..| .-||-.-.+.|++
T Consensus 139 dn~lvlP~~~~Vr~~vtS~----DViHsf~vP~lg~-------------------------K~D---aiPGr~n~~~~~~ 186 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSE----DVLHSWAVPSLGL-------------------------KTD---AIPGRLNQTTLMS 186 (227)
T ss_dssp SSCEEEETTSCEEEEEEES----SSCEEEEEGGGTE-------------------------EEE---ECTTCCEEEEECC
T ss_pred CceEEEecCCEEEEEEEeC----cccceeeecccCc-------------------------EEE---ecCCceEEEEEec
Confidence 3447899999999999984 4556655432211 112 3345566788999
Q ss_pred cCceeEEEEeehhHhHh-ccceEEEEEec
Q 036540 517 DNPGVWFMHCHLELHTM-WGLKMAFVVEN 544 (562)
Q Consensus 517 dnpG~w~~HCHil~H~d-~GM~~~~~V~~ 544 (562)
+.||.|...|.-.-... .-|-..++|.+
T Consensus 187 ~~~G~y~g~Cse~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 187 SRPGLYYGQCSEICGSNHSFMPIVLELVP 215 (227)
T ss_dssp SSCEEEEECCCSCCSTTGGGCCEEEEEEC
T ss_pred CCcEEEEEEehhhcccccccCeEEEEEEc
Confidence 99999999998755443 45666666654
No 161
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=30.33 E-value=37 Score=27.94 Aligned_cols=45 Identities=29% Similarity=0.364 Sum_probs=25.2
Q ss_pred EEEEEeCCCCCc---eEEecCcc-----ccCCCCCCCCCcccccccCCCCeEEEEE
Q 036540 72 LINVTNHAQYNM---SIHWHGLK-----QYRNGWADGPAYITQCPIKTGNSYTYDF 119 (562)
Q Consensus 72 ~i~~~N~l~~~~---siH~HG~~-----~~~~~~~DGv~~~t~~~i~pG~~~~y~~ 119 (562)
+|++.|....+. +=||.=.. .... -+||-|- |.-|.||++|+|.=
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~--G~GVVG~-qP~L~PGe~f~YtS 85 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVE--GDGVVGE-QPRIKANDEYTYSS 85 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEE--EESBTTB-CCEECTTCEEEEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEE--CCceEcC-CCcCCCCCceEEeC
Confidence 566677776553 44664221 1111 3444332 45689999888864
No 162
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=27.05 E-value=28 Score=28.76 Aligned_cols=18 Identities=28% Similarity=0.351 Sum_probs=16.2
Q ss_pred EEEEecCcEEEEEEEecC
Q 036540 215 AMEVESGKTYLLRIVNAA 232 (562)
Q Consensus 215 ~~~v~~G~~~rlRliN~~ 232 (562)
-++|+.||+|||.+.|-+
T Consensus 72 ~InV~~GETVrF~v~nkt 89 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEKI 89 (131)
T ss_dssp EEEEETTCEEEEEETTEE
T ss_pred EEEecCCCEEEEEeCCcE
Confidence 399999999999998887
No 163
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=26.32 E-value=78 Score=29.02 Aligned_cols=50 Identities=18% Similarity=0.295 Sum_probs=34.5
Q ss_pred ceEEEecCCEEEEEEEeCCCC------CceEEecCccccCCCCCCCCCcccccccCCCCeEEE
Q 036540 61 PTIYIREGDRVLINVTNHAQY------NMSIHWHGLKQYRNGWADGPAYITQCPIKTGNSYTY 117 (562)
Q Consensus 61 P~i~v~~Gd~v~i~~~N~l~~------~~siH~HG~~~~~~~~~DGv~~~t~~~i~pG~~~~y 117 (562)
-+|+.+-|-++.|.|.|..+. +.++...|......+ -++..+.|||++|.
T Consensus 129 EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~a-------G~~i~L~PGESiTl 184 (246)
T 3kmh_A 129 EDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTA-------GSQLRLSPGESICL 184 (246)
T ss_dssp EEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECT-------TCEEEECTTCEEEE
T ss_pred ccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCC-------CCEEEECCCCeEec
Confidence 478999999999999999743 456666666543321 12356899998763
No 164
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=26.15 E-value=81 Score=26.32 Aligned_cols=74 Identities=11% Similarity=-0.014 Sum_probs=0.0
Q ss_pred EEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCCcc----------cccccCCCCeEEEEEEeCCCCCceEEecC
Q 036540 64 YIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYI----------TQCPIKTGNSYTYDFNVTGQRGTLWWHAH 133 (562)
Q Consensus 64 ~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~~~----------t~~~i~pG~~~~y~~~~~~~~Gt~wyH~h 133 (562)
+++.||+|+.+..+. .+.|..+ ...++..-.+-...|++-+.+|++||-|-
T Consensus 31 ~F~vGD~LvF~y~~~-------------------~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~L~~~~G~~YFicg 91 (138)
T 1jer_A 31 TFRVGDSLQFNFPAN-------------------AHNVHEMETKQSFDACNFVNSDNDVERTSPVIERLDELGMHYFVCT 91 (138)
T ss_dssp CEETTCEEEECCCTT-------------------TCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEEECCSSEEEEEECC
T ss_pred cCcCCCEEEEeecCC-------------------CceEEEeCchhhcCccCCCCccccccCCCeEEEeccCCcCEEEEcC
Q ss_pred chhhc-ccceeEEEEcCCCCCCCC
Q 036540 134 ILWLR-ATVYGAIVIMPKERTSFP 156 (562)
Q Consensus 134 ~~~~~-~Gl~G~iiV~~~~~~~~~ 156 (562)
..+.= .||...|.|......+.+
T Consensus 92 ~~gHC~~GmKl~I~V~~~~~~~~~ 115 (138)
T 1jer_A 92 VGTHCSNGQKLSINVVAANATVSM 115 (138)
T ss_dssp STTTGGGTCEEEEEEECCC-----
T ss_pred CCCccccCCEEEEEEcCCCCCCCC
No 165
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=25.65 E-value=54 Score=27.47 Aligned_cols=45 Identities=22% Similarity=0.248 Sum_probs=25.0
Q ss_pred EEEEEeCCCCCc---eEEecCcc-----ccCCCCCCCCCcccccccCCCCeEEEEE
Q 036540 72 LINVTNHAQYNM---SIHWHGLK-----QYRNGWADGPAYITQCPIKTGNSYTYDF 119 (562)
Q Consensus 72 ~i~~~N~l~~~~---siH~HG~~-----~~~~~~~DGv~~~t~~~i~pG~~~~y~~ 119 (562)
+|++.|....+. +=||.=.. .... -+||-|- |.-|.||++|+|.=
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~--G~GVVGe-qPvL~PGe~F~YtS 90 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVR--GLGVVGQ-QPLLAPGETFEYTS 90 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEE--EESSSSC-CCEECTTCEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEE--CCCeecC-CCcCCCCCceEEcC
Confidence 466677766553 44664221 1111 3444332 45689999888864
No 166
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=25.37 E-value=72 Score=25.05 Aligned_cols=68 Identities=9% Similarity=0.110 Sum_probs=39.0
Q ss_pred ceeECCccCCCCCCCCCcceEEEEecCcEEE--------EEEEecCCCCeE-EEEEcCc-ceEEEEeCC-CccCceEEeE
Q 036540 195 AHTINGKSGPLFPCSEKHTFAMEVESGKTYL--------LRIVNAALNDEL-FFAIAGH-NMTVVEIDA-VYTKPFTTQA 263 (562)
Q Consensus 195 ~~~iNG~~~~~~~~~~~~~~~~~v~~G~~~r--------lRliN~~~~~~~-~~~l~gh-~~~via~DG-~~~~p~~~d~ 263 (562)
++++||+ |...+++++.|| |.|-.-+.+..| .+...+. .+.+-++.| .++....+..
T Consensus 6 s~~~~~~------------p~v~l~~~~~~rIGR~~~~~l~LddpsVs~~HAti~~~~~G~~~l~S~nGtVFVNGqrv~~ 73 (102)
T 3uv0_A 6 SLFFGGL------------PAILLKADTIYRIGRQKGLEISIADESMELAHATACILRRGVVRLAALVGKIFVNDQEETV 73 (102)
T ss_dssp EEEETTS------------CCEECCTTCCEEEESSTTSTEECCCTTSCTTCEEEEEEETTEEEEEESSSCEEETTEEESE
T ss_pred EEEECCc------------ccEEeecCcEEEEcCCCCCcEEECCcccccceEEEEecCCceEEEEeccCcEEECCEEeee
Confidence 5778887 557788887766 334333433333 2323222 222336667 4776666677
Q ss_pred EEeCCCceEEE
Q 036540 264 ILIAPGQTTNV 274 (562)
Q Consensus 264 v~l~pgeR~dv 274 (562)
+.|..|..++=
T Consensus 74 ~~I~~gDtI~g 84 (102)
T 3uv0_A 74 VDIGMENAVAG 84 (102)
T ss_dssp EEECGGGCBTT
T ss_pred EEccCCccccc
Confidence 77777776543
No 167
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=24.60 E-value=48 Score=27.60 Aligned_cols=45 Identities=18% Similarity=0.215 Sum_probs=25.0
Q ss_pred EEEEEeCCCCCc---eEEecCcc-----ccCCCCCCCCCcccccccCCCCeEEEEE
Q 036540 72 LINVTNHAQYNM---SIHWHGLK-----QYRNGWADGPAYITQCPIKTGNSYTYDF 119 (562)
Q Consensus 72 ~i~~~N~l~~~~---siH~HG~~-----~~~~~~~DGv~~~t~~~i~pG~~~~y~~ 119 (562)
+|++.|....+. +=||.=.. .... -+||-|- |.-|.||++|+|.=
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~--G~GVVGe-qP~L~PGe~F~YtS 85 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQ--GAGVVGE-TPTIPPNTAYQYTS 85 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEE--EESBTTB-CCEECTTEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEE--cCceEcC-CCcCCCCCceEEcC
Confidence 466677766553 44664211 1111 3444332 45689999888864
No 168
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=24.31 E-value=2.9e+02 Score=22.59 Aligned_cols=20 Identities=25% Similarity=0.461 Sum_probs=17.4
Q ss_pred CceEEEecCCEEEEEEEeCC
Q 036540 60 GPTIYIREGDRVLINVTNHA 79 (562)
Q Consensus 60 gP~i~v~~Gd~v~i~~~N~l 79 (562)
|-+|.++.||++.|.|.-+-
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NP 51 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNP 51 (131)
T ss_dssp TCEEEECTTCEEEEEEEECG
T ss_pred CCEEEEeCCCEEEEEeCCCC
Confidence 56899999999999998664
No 169
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=24.10 E-value=2.3e+02 Score=27.53 Aligned_cols=69 Identities=16% Similarity=0.175 Sum_probs=45.0
Q ss_pred CcEEEEEEEecCCCCeEEE----EEcC---cceEEEEeCCCcc----------CceEEeEEEeCCCceEEEEEEeCC---
Q 036540 221 GKTYLLRIVNAALNDELFF----AIAG---HNMTVVEIDAVYT----------KPFTTQAILIAPGQTTNVLVKADQ--- 280 (562)
Q Consensus 221 G~~~rlRliN~~~~~~~~~----~l~g---h~~~via~DG~~~----------~p~~~d~v~l~pgeR~dv~v~~~~--- 280 (562)
+-.++.-|-|.| ...+.| -+++ ..|.| ..||..+ .|...+-+.|.|||.+++.+++..
T Consensus 37 ~~~vk~tvtN~g-~~~~~lLk~~~lD~~~~~~~~V-~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~yd 114 (343)
T 2x3c_A 37 DVRVNLTLTNTG-DKPIRLLKWQLPGSDDAPLFLV-ERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYD 114 (343)
T ss_dssp CCEEEEEEEECS-SSCEEEEGGGSCSSSCCCCEEE-EETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBT
T ss_pred CeEEEEEEEeCC-CCceEeeccCCCCcCccceEEE-EeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhccc
Confidence 355667777777 344433 1232 34555 4677654 122247899999999999999976
Q ss_pred --CCCeEEEEEee
Q 036540 281 --SPSRYFMAARP 291 (562)
Q Consensus 281 --~~G~~~i~~~~ 291 (562)
.+|.|.++...
T Consensus 115 Ls~gG~y~v~~~g 127 (343)
T 2x3c_A 115 MSAQGQYSIRYQL 127 (343)
T ss_dssp CCSCEEEEEEEC-
T ss_pred cCCCceEEEEEee
Confidence 35899998864
No 170
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=23.42 E-value=75 Score=25.63 Aligned_cols=35 Identities=9% Similarity=-0.018 Sum_probs=26.2
Q ss_pred EEEEeCCCCCceEEecCchhhc-ccceeEE-EEcCCCC
Q 036540 117 YDFNVTGQRGTLWWHAHILWLR-ATVYGAI-VIMPKER 152 (562)
Q Consensus 117 y~~~~~~~~Gt~wyH~h~~~~~-~Gl~G~i-iV~~~~~ 152 (562)
..+.+ ..+|++||-|-..+.= .||...| .|.....
T Consensus 72 ~~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~~ 108 (116)
T 1x9u_A 72 VKIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAGGA 108 (116)
T ss_dssp EEEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC---
T ss_pred eEEEE-CCCCCEEEECCCCCccccCCEEEEEEECCCCC
Confidence 46777 7899999999876554 8999999 8876543
No 171
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=23.23 E-value=2.9e+02 Score=22.18 Aligned_cols=21 Identities=19% Similarity=0.306 Sum_probs=16.3
Q ss_pred CceEEEecCCEEEEEEEeCCC
Q 036540 60 GPTIYIREGDRVLINVTNHAQ 80 (562)
Q Consensus 60 gP~i~v~~Gd~v~i~~~N~l~ 80 (562)
+-+|.++.||++.|.|.-+-.
T Consensus 12 ~~ti~l~~Ge~~~I~L~~NPt 32 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESNPT 32 (121)
T ss_pred CcEEEEcCCCEEEEEeCCCCC
Confidence 346999999999999875543
No 172
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=22.68 E-value=76 Score=25.61 Aligned_cols=33 Identities=24% Similarity=0.437 Sum_probs=28.3
Q ss_pred EEEecCceeEEEEeehhHhHhccceEEE-EEecC
Q 036540 513 RFRADNPGVWFMHCHLELHTMWGLKMAF-VVENG 545 (562)
Q Consensus 513 rf~~dnpG~w~~HCHil~H~d~GM~~~~-~V~~~ 545 (562)
.+..+.+|.+-|=|=...|=..||-+.+ .|...
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~ 106 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAG 106 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC-
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCC
Confidence 4567889999999999999999999999 88654
No 173
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=21.96 E-value=3e+02 Score=21.88 Aligned_cols=68 Identities=12% Similarity=0.050 Sum_probs=36.5
Q ss_pred CceEEEecCCEEEEEEEeCCCCCceEEecCccccCCCCCCCCC----cc----cccccCCCCeEEEEEEeCCCCCce
Q 036540 60 GPTIYIREGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPA----YI----TQCPIKTGNSYTYDFNVTGQRGTL 128 (562)
Q Consensus 60 gP~i~v~~Gd~v~i~~~N~l~~~~siH~HG~~~~~~~~~DGv~----~~----t~~~i~pG~~~~y~~~~~~~~Gt~ 128 (562)
|-+|.++.||++.|.|.-+-.-..+-......-...--.+|.. +. ..-.+..|....+.|++ .++|+.
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a-~~~G~~ 89 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKP-RKRGHH 89 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEE-CSSSSE
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEE-eCCceE
Confidence 4579999999999999866543333333321100000011110 00 00124557788888888 677763
No 174
>2yev_B Cytochrome C oxidase subunit 2; electron transport; HET: FME 5PL HAS 4AG 7E8 HEC 7E9; 2.36A {Thermus thermophilus}
Probab=27.54 E-value=19 Score=35.34 Aligned_cols=60 Identities=20% Similarity=0.240 Sum_probs=42.6
Q ss_pred EEEEecCcEEEEEEEecCCCCeEEEEEcCcceEEEEeCCCccCceEEeEEEeCCCceEEEEEEeCCCCCeEEEEEeecC
Q 036540 215 AMEVESGKTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTKPFTTQAILIAPGQTTNVLVKADQSPSRYFMAARPFM 293 (562)
Q Consensus 215 ~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~~~i~~~~~~ 293 (562)
.+.+..|+.+||++.... -.|.|.+.....+ +..-||..-.+.+.++. +|.|+..|..++
T Consensus 142 ~l~~P~~~~v~~~~ts~D--ViHsf~vp~~~~k----------------~d~~PG~~~~~~~~~~~-~G~y~g~c~e~c 201 (337)
T 2yev_B 142 ELVLPAGVPVELEITSKD--VIHSFWVPGLAGK----------------RDAIPGQTTRISFEPKE-PGLYYGFCAELC 201 (337)
Confidence 478999999999987644 3444444433322 34457888888888887 799999997554
No 175
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=21.39 E-value=35 Score=28.13 Aligned_cols=17 Identities=12% Similarity=0.313 Sum_probs=15.9
Q ss_pred eEEEecCCEEEEEEEeC
Q 036540 62 TIYIREGDRVLINVTNH 78 (562)
Q Consensus 62 ~i~v~~Gd~v~i~~~N~ 78 (562)
-|.|+.|++|++.+.|.
T Consensus 72 ~InV~~GETVrF~v~nk 88 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEK 88 (131)
T ss_dssp EEEEETTCEEEEEETTE
T ss_pred EEEecCCCEEEEEeCCc
Confidence 49999999999999998
No 176
>3b9t_A Twin-arginine translocation pathway signal protei; YP_546212.1, predicted acetamidase/formamidase, acetamidase/formamidase family; 1.58A {Methylobacillus flagellatus KT}
Probab=20.74 E-value=41 Score=34.54 Aligned_cols=26 Identities=15% Similarity=0.188 Sum_probs=20.6
Q ss_pred eEEE-EcCcCCCceEEEecCCEEEEEEE
Q 036540 50 PIVT-VNGMFPGPTIYIREGDRVLINVT 76 (562)
Q Consensus 50 ~~~~-~Ng~~pgP~i~v~~Gd~v~i~~~ 76 (562)
-.|+ ++...| |+++|+.||+|+|.-.
T Consensus 83 v~wg~fs~~~~-PvltV~sGd~V~ieT~ 109 (484)
T 3b9t_A 83 VSWGFFSKSLK-PVVELESGDFATIETL 109 (484)
T ss_dssp EEESEECTTSC-CSEEECTTCEEEEEEC
T ss_pred eEeCCcCCCCC-ceEEECCCCEEEEEEe
Confidence 3465 566676 9999999999999854
No 177
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=20.22 E-value=34 Score=26.74 Aligned_cols=24 Identities=25% Similarity=0.209 Sum_probs=20.8
Q ss_pred eEEEEcCcCCCceEEEecCCEEEE
Q 036540 50 PIVTVNGMFPGPTIYIREGDRVLI 73 (562)
Q Consensus 50 ~~~~~Ng~~pgP~i~v~~Gd~v~i 73 (562)
....+||++-.+.-.++.||+|+|
T Consensus 59 ~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 59 NKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp SEEEEEECSCCTTCBCCTTCEEEE
T ss_pred cEEEEcCEECCCCccCCCCCEEEE
Confidence 468999988778888999999987
Done!